BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5351
(65 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328717132|ref|XP_001943169.2| PREDICTED: homeobox protein Nkx-6.2-like [Acyrthosiphon pisum]
Length = 266
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%), Gaps = 2/58 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRELAAH 59
V+VWFQNRRTKWRKKHAAEMATAKRKQ+ E ++E +ED+ D+AAKRL+RELAAH
Sbjct: 192 VKVWFQNRRTKWRKKHAAEMATAKRKQE--EAADESDEDEDMRDDSAAKRLKRELAAH 247
>gi|328777543|ref|XP_001121097.2| PREDICTED: homeobox protein Nkx-6.2-like [Apis mellifera]
Length = 362
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 6/61 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYR------HSDNAAKRLRRE 55
V+VWFQNRRTKWRKKHAAEMATAKR+Q++VE E ED +S+ AAKRLRRE
Sbjct: 296 VKVWFQNRRTKWRKKHAAEMATAKRRQEEVEGVVAEGEDGCSDAEAEGNSETAAKRLRRE 355
Query: 56 L 56
L
Sbjct: 356 L 356
>gi|383855980|ref|XP_003703488.1| PREDICTED: homeobox protein Nkx-6.2-like [Megachile rotundata]
Length = 365
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 6/61 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYR------HSDNAAKRLRRE 55
V+VWFQNRRTKWRKKHAAEMATAKR+Q++VE E ED +S+ AAKRLRRE
Sbjct: 299 VKVWFQNRRTKWRKKHAAEMATAKRRQEEVEGVVAEGEDGCSDTETDGNSETAAKRLRRE 358
Query: 56 L 56
L
Sbjct: 359 L 359
>gi|403263402|ref|XP_003924023.1| PREDICTED: homeobox protein Nkx-6.1 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|296196110|ref|XP_002745710.1| PREDICTED: homeobox protein Nkx-6.1 [Callithrix jacchus]
Length = 366
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|332819286|ref|XP_003310328.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1 [Pan
troglodytes]
Length = 367
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/45 (77%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAKRKQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKRKQDSETERLKGASENEEEDD 324
>gi|6016212|sp|Q60554.1|NKX61_MESAU RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
protein NK-6 homolog A
gi|587467|emb|CAA57166.1| NKx6.1 [Mesocricetus auratus]
Length = 364
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGTSENEEEDD 324
>gi|395542187|ref|XP_003773016.1| PREDICTED: homeobox protein Nkx-6.1 [Sarcophilus harrisii]
Length = 379
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 295 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 339
>gi|345482709|ref|XP_001608197.2| PREDICTED: homeobox protein Nkx-6.2-like [Nasonia vitripennis]
Length = 428
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 46/80 (57%), Gaps = 22/80 (27%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSD--------------- 46
V+VWFQNRRTKWRKKHAAEMATAKR+Q++VE E ED +D
Sbjct: 345 VKVWFQNRRTKWRKKHAAEMATAKRRQEEVEGVVGEAEDGCSDADADGSEPDKSQQHQPS 404
Query: 47 -------NAAKRLRRELAAH 59
AAKRLRREL H
Sbjct: 405 STGTTPETAAKRLRRELEHH 424
>gi|301755616|ref|XP_002913657.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1-like
[Ailuropoda melanoleuca]
Length = 461
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 279 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 323
>gi|380029227|ref|XP_003698281.1| PREDICTED: uncharacterized protein LOC100869366 [Apis florea]
Length = 385
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 6/61 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYR------HSDNAAKRLRRE 55
V+VWFQNRRTKWRKKHAAEMATAKR+Q++VE E ED +S+ AAKRLRRE
Sbjct: 319 VKVWFQNRRTKWRKKHAAEMATAKRRQEEVEGVVAEGEDGCSDAEAEGNSETAAKRLRRE 378
Query: 56 L 56
L
Sbjct: 379 L 379
>gi|291401480|ref|XP_002717090.1| PREDICTED: NK6 transcription factor related, locus 1 [Oryctolagus
cuniculus]
Length = 369
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|1894911|gb|AAD11962.1| NK homeobox protein [Homo sapiens]
Length = 367
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|111120318|ref|NP_006159.2| homeobox protein Nkx-6.1 [Homo sapiens]
gi|288558819|sp|P78426.2|NKX61_HUMAN RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
protein NK-6 homolog A
gi|119626354|gb|EAX05949.1| NK6 transcription factor related, locus 1 (Drosophila) [Homo
sapiens]
gi|182888287|gb|AAI60030.1| NK6 homeobox 1 [synthetic construct]
Length = 367
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|332233413|ref|XP_003265896.1| PREDICTED: homeobox protein Nkx-6.1 [Nomascus leucogenys]
Length = 368
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|13929036|ref|NP_113925.1| homeobox protein Nkx-6.1 [Rattus norvegicus]
gi|6016213|sp|O35762.1|NKX61_RAT RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
protein NK-6 homolog A
gi|2218137|gb|AAB61665.1| homeodomain protein Nkx6.1 [Rattus norvegicus]
gi|149046765|gb|EDL99539.1| rCG37924, isoform CRA_a [Rattus norvegicus]
Length = 365
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EE+DD
Sbjct: 281 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGTSENEEDDD 325
>gi|340717554|ref|XP_003397246.1| PREDICTED: homeobox protein Nkx-6.2-like [Bombus terrestris]
gi|350407706|ref|XP_003488167.1| PREDICTED: homeobox protein Nkx-6.2-like [Bombus impatiens]
Length = 378
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 6/61 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYR------HSDNAAKRLRRE 55
V+VWFQNRRTKWRKKHAAEMATAKR+Q++VE E ED +S+ AAKRLRRE
Sbjct: 312 VKVWFQNRRTKWRKKHAAEMATAKRRQEEVEGVVAEGEDGCSDAEAEGNSETAAKRLRRE 371
Query: 56 L 56
L
Sbjct: 372 L 372
>gi|297673907|ref|XP_002814987.1| PREDICTED: homeobox protein Nkx-6.1 [Pongo abelii]
Length = 367
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|402869337|ref|XP_003898719.1| PREDICTED: homeobox protein Nkx-6.1 [Papio anubis]
Length = 366
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|126331026|ref|XP_001364649.1| PREDICTED: homeobox protein Nkx-6.1-like [Monodelphis domestica]
Length = 376
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 292 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 336
>gi|431916147|gb|ELK16399.1| Homeobox protein Nkx-6.1 [Pteropus alecto]
Length = 359
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 274 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 318
>gi|395834160|ref|XP_003790080.1| PREDICTED: homeobox protein Nkx-6.1 [Otolemur garnettii]
Length = 366
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|21450629|ref|NP_659204.1| homeobox protein Nkx-6.1 [Mus musculus]
gi|27734433|sp|Q99MA9.1|NKX61_MOUSE RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
protein NK-6 homolog A
gi|13650146|gb|AAK37567.1|AF357883_1 homeodomain transcription factor [Mus musculus]
gi|187952779|gb|AAI38020.1| NK6 homeobox 1 [Mus musculus]
gi|187953783|gb|AAI38021.1| NK6 homeobox 1 [Mus musculus]
Length = 365
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EE+DD
Sbjct: 281 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGTSENEEDDD 325
>gi|109074222|ref|XP_001104458.1| PREDICTED: homeobox protein Nkx-6.1 [Macaca mulatta]
Length = 366
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE +EEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENDEEDD 324
>gi|307172607|gb|EFN63966.1| Homeobox protein Nkx-6.1 [Camponotus floridanus]
Length = 181
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 44/69 (63%), Gaps = 14/69 (20%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDD--------------YRHSDN 47
V+VWFQNRRTKWRKKHAAEMATAKR+Q++VE E ED +
Sbjct: 107 VKVWFQNRRTKWRKKHAAEMATAKRRQEEVEGVVAEGEDGCSDAETDGGSGRGGGGGGNP 166
Query: 48 AAKRLRREL 56
AAKRLRREL
Sbjct: 167 AAKRLRREL 175
>gi|329664496|ref|NP_001193167.1| homeobox protein Nkx-6.1 [Bos taurus]
gi|296486366|tpg|DAA28479.1| TPA: homeodomain transcription factor Nkx6.1-like [Bos taurus]
Length = 366
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 278 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 322
>gi|74001795|ref|XP_544960.2| PREDICTED: homeobox protein Nkx-6.1 isoform 1 [Canis lupus
familiaris]
Length = 366
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 281 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 325
>gi|153791646|ref|NP_001093386.1| NK6 homeobox 1 [Xenopus laevis]
gi|148540779|gb|ABQ86050.1| NK6 transcription factor related locus 1 [Xenopus laevis]
gi|213623166|gb|AAI69378.1| NK6 transcription factor related locus 1 [Xenopus laevis]
gi|213625970|gb|AAI69380.1| NK6 transcription factor related locus 1 [Xenopus laevis]
Length = 351
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE------SEEEEEDDY 42
V+VWFQNRRTKWRKKHAAEMATAK+KQD E EEE+DDY
Sbjct: 268 VKVWFQNRRTKWRKKHAAEMATAKKKQDTETERLKGASDNEEEDDDY 314
>gi|426344856|ref|XP_004039121.1| PREDICTED: homeobox protein Nkx-6.1 [Gorilla gorilla gorilla]
Length = 324
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 237 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 281
>gi|348532335|ref|XP_003453662.1| PREDICTED: homeobox protein Nkx-6.1-like [Oreochromis niloticus]
Length = 320
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMA+AK+KQD E S+ E+EDD
Sbjct: 237 VKVWFQNRRTKWRKKHAAEMASAKKKQDSETERLKGTSDNEDEDD 281
>gi|338723381|ref|XP_003364713.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1-like
[Equus caballus]
Length = 442
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 280 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 324
>gi|449499800|ref|XP_002189840.2| PREDICTED: homeobox protein goosecoid isoform B-like [Taeniopygia
guttata]
Length = 276
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 192 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 236
>gi|351705064|gb|EHB07983.1| Homeobox protein Nkx-6.2 [Heterocephalus glaber]
Length = 277
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 13/69 (18%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDYR-----HSDNAAK 50
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y +SD+ +
Sbjct: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNRPLDPNSDD--E 249
Query: 51 RLRRELAAH 59
++ R L H
Sbjct: 250 KITRLLKKH 258
>gi|157154301|ref|NP_001016583.2| NK6 homeobox 1 [Xenopus (Silurana) tropicalis]
gi|148540783|gb|ABQ86052.1| NK6 transcription factor related locus 1 [Xenopus (Silurana)
tropicalis]
Length = 342
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE------SEEEEEDDY 42
V+VWFQNRRTKWRKKHAAEMATAK+KQD E EEE+DDY
Sbjct: 259 VKVWFQNRRTKWRKKHAAEMATAKKKQDTETERLKGASDNEEEDDDY 305
>gi|426232272|ref|XP_004010157.1| PREDICTED: uncharacterized protein LOC554330 [Ovis aries]
Length = 286
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 197 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 241
>gi|348567312|ref|XP_003469444.1| PREDICTED: homeobox protein Nkx-6.1-like [Cavia porcellus]
Length = 223
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 140 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 184
>gi|354506570|ref|XP_003515333.1| PREDICTED: hypothetical protein LOC100772326 [Cricetulus griseus]
Length = 497
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EE+DD
Sbjct: 376 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGTSENEEDDD 420
>gi|405978480|gb|EKC42860.1| Homeobox protein Nkx-6.2 [Crassostrea gigas]
Length = 269
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 41/50 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKR 51
V+VWFQNRRTKWRKKHAAEMA+AK+KQ+Q E+ + + DD + SD++ R
Sbjct: 208 VKVWFQNRRTKWRKKHAAEMASAKKKQEQAEDLDTSDIDDEQSSDSSKLR 257
>gi|327273028|ref|XP_003221285.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1-like
[Anolis carolinensis]
Length = 206
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 35/44 (79%), Gaps = 5/44 (11%)
Query: 3 EVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 111 QVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 154
>gi|440908508|gb|ELR58516.1| Homeobox protein Nkx-6.1, partial [Bos grunniens mutus]
Length = 152
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 90 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 134
>gi|449274402|gb|EMC83595.1| Homeobox protein Nkx-6.1, partial [Columba livia]
Length = 118
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 53 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 97
>gi|395842583|ref|XP_003794096.1| PREDICTED: homeobox protein Nkx-6.2 [Otolemur garnettii]
Length = 277
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGSSDAEDDDEY 238
>gi|66394665|gb|AAY46192.1| NK6 transcription factor related locus 1 [Ovis aries]
Length = 106
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 54 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 98
>gi|297687690|ref|XP_002821339.1| PREDICTED: homeobox protein Nkx-6.2 [Pongo abelii]
Length = 277
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE------SEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD E S+ E++D+Y
Sbjct: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 238
>gi|410900372|ref|XP_003963670.1| PREDICTED: homeobox protein Nkx-6.2-like [Takifugu rubripes]
Length = 279
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/44 (70%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+K D +++ES + EEDD
Sbjct: 196 VKVWFQNRRTKWRKKHAAEMATAKKKHDSETEKMKESSDNEEDD 239
>gi|355687280|gb|EHH25864.1| hypothetical protein EGK_15714 [Macaca mulatta]
Length = 217
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE +EEDD
Sbjct: 131 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENDEEDD 175
>gi|28912912|ref|NP_796374.1| homeobox protein Nkx-6.2 [Homo sapiens]
gi|13160477|gb|AAK13251.1|AF184215_1 GTX [Homo sapiens]
gi|75517780|gb|AAI01636.1| NK6 homeobox 2 [Homo sapiens]
gi|85396895|gb|AAI04824.1| NK6 homeobox 2 [Homo sapiens]
gi|119581712|gb|EAW61308.1| NK6 transcription factor related, locus 2 (Drosophila) [Homo
sapiens]
Length = 277
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE------SEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD E S+ E++D+Y
Sbjct: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 238
>gi|112418620|gb|AAI22030.1| nkx6-1 protein [Xenopus (Silurana) tropicalis]
Length = 89
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE------SEEEEEDDY 42
V+VWFQNRRTKWRKKHAAEMATAK+KQD E EEE+DDY
Sbjct: 6 VKVWFQNRRTKWRKKHAAEMATAKKKQDTETERLKGASDNEEEDDDY 52
>gi|344296088|ref|XP_003419741.1| PREDICTED: hypothetical protein LOC100668108 [Loxodonta africana]
Length = 724
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ EE+D+Y
Sbjct: 639 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGSSDAEEDDEY 685
>gi|47221693|emb|CAG10165.1| unnamed protein product [Tetraodon nigroviridis]
Length = 267
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/44 (70%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+K D +++ES + EEDD
Sbjct: 190 VKVWFQNRRTKWRKKHAAEMATAKKKHDSETEKMKESSDNEEDD 233
>gi|388453777|ref|NP_001253559.1| homeobox protein Nkx-6.2 [Macaca mulatta]
gi|380786785|gb|AFE65268.1| homeobox protein Nkx-6.2 [Macaca mulatta]
Length = 277
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 238
>gi|351697247|gb|EHB00166.1| Homeobox protein Nkx-6.1 [Heterocephalus glaber]
Length = 200
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 35/44 (79%), Gaps = 5/44 (11%)
Query: 3 EVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 118 QVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 161
>gi|147904242|ref|NP_001090355.1| NK6 homeobox 2 [Xenopus laevis]
gi|114107871|gb|AAI23230.1| Nkx6-2 protein [Xenopus laevis]
Length = 281
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
V+VWFQNRRTKWRK+HAAEMATAK+K D +++ES + EEDD
Sbjct: 198 VKVWFQNRRTKWRKRHAAEMATAKKKHDSETEKMKESSDNEEDD 241
>gi|76443675|ref|NP_899071.2| NK6 transcription factor related, locus 2 [Mus musculus]
gi|157820587|ref|NP_001101028.1| NK6 homeobox 2 [Rattus norvegicus]
gi|479765|pir||S35304 homeotic protein Gtx - mouse
gi|147898087|gb|AAI40414.1| NK6 homeobox 2 [synthetic construct]
gi|148685913|gb|EDL17860.1| NK6 transcription factor related, locus 2 (Drosophila) [Mus
musculus]
gi|149061429|gb|EDM11852.1| NK6 transcription factor related, locus 2 (Drosophila) (predicted)
[Rattus norvegicus]
Length = 277
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 238
>gi|359323273|ref|XP_003640053.1| PREDICTED: homeobox protein Nkx-6.2-like [Canis lupus familiaris]
Length = 275
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 191 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 237
>gi|89573738|gb|ABD77103.1| transcription factor Nkx6.2 [Danio rerio]
Length = 280
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
V+VWFQNRRTKWRK+HAAEMATAK+K D +++ES + +EDD
Sbjct: 195 VKVWFQNRRTKWRKRHAAEMATAKKKHDSETEKMKESSDNDEDD 238
>gi|332017536|gb|EGI58247.1| Homeobox protein Nkx-6.1 [Acromyrmex echinatior]
Length = 220
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAKR+Q++VE E ED
Sbjct: 137 VKVWFQNRRTKWRKKHAAEMATAKRRQEEVEGVVAEGEDG 176
>gi|296221502|ref|XP_002807522.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.2
[Callithrix jacchus]
Length = 278
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 238
>gi|313747575|ref|NP_001186477.1| homeobox protein Nkx-6.2 [Gallus gallus]
Length = 278
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
V+VWFQNRRTKWRK+HAAEMA+AK+K D +++ES + E+DD
Sbjct: 195 VKVWFQNRRTKWRKRHAAEMASAKKKHDSETEKLKESSDNEDDD 238
>gi|397525440|ref|XP_003832677.1| PREDICTED: homeobox protein Nkx-6.1 [Pan paniscus]
Length = 256
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EEEDD
Sbjct: 169 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD 213
>gi|209413788|ref|NP_001129256.1| homeobox protein Nkx-6.2 [Danio rerio]
Length = 278
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
V+VWFQNRRTKWRK+HAAEMATAK+K D +++ES + +EDD
Sbjct: 195 VKVWFQNRRTKWRKRHAAEMATAKKKHDSETEKMKESSDNDEDD 238
>gi|158564033|sp|Q9C056.2|NKX62_HUMAN RecName: Full=Homeobox protein Nkx-6.2; AltName: Full=Homeobox
protein NK-6 homolog B
Length = 277
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 37/47 (78%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HA EMA+AK+KQD +V S+ E++D+Y
Sbjct: 192 VKVWFQNRRTKWRKRHAVEMASAKKKQDSDAEKLKVGGSDAEDDDEY 238
>gi|344256863|gb|EGW12967.1| Homeobox protein Nkx-6.1 [Cricetulus griseus]
Length = 99
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EE+DD
Sbjct: 6 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGTSENEEDDD 50
>gi|332835399|ref|XP_521638.3| PREDICTED: homeobox protein Nkx-6.2 [Pan troglodytes]
Length = 276
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES-----EEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD E + E+D+Y
Sbjct: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDEY 237
>gi|397490772|ref|XP_003816365.1| PREDICTED: uncharacterized protein LOC100967773 [Pan paniscus]
Length = 667
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES-----EEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD E + E+D+Y
Sbjct: 583 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDEY 628
>gi|410931902|ref|XP_003979334.1| PREDICTED: homeobox protein Nkx-6.1-like [Takifugu rubripes]
Length = 319
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRRTKWRKKHAAEMATAK+KQD E
Sbjct: 237 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETE 268
>gi|148688314|gb|EDL20261.1| NK6 transcription factor related, locus 1 (Drosophila) [Mus
musculus]
Length = 262
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE-----SEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E SE EE+DD
Sbjct: 178 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGTSENEEDDD 222
>gi|358416571|ref|XP_594323.5| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC516179
[Bos taurus]
Length = 414
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 19/79 (24%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDYRHS------DNAA 49
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y D
Sbjct: 329 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNRPLDPNWDDEKI 388
Query: 50 KRLRRE-------LAAHCG 61
RL ++ LA+ CG
Sbjct: 389 TRLLKKHRAPNLALASPCG 407
>gi|301760125|ref|XP_002915867.1| PREDICTED: homeobox protein Nkx-6.2-like [Ailuropoda melanoleuca]
Length = 209
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 125 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 171
>gi|297485260|ref|XP_002694927.1| PREDICTED: homeobox protein Nkx-6.2 [Bos taurus]
gi|296478155|tpg|DAA20270.1| TPA: NK6 transcription factor related, locus 2-like [Bos taurus]
Length = 334
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 19/79 (24%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDYRHS------DNAA 49
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y D
Sbjct: 249 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNRPLDPNWDDEKI 308
Query: 50 KRLRRE-------LAAHCG 61
RL ++ LA+ CG
Sbjct: 309 TRLLKKHRAPNLALASPCG 327
>gi|444726777|gb|ELW67297.1| Homeobox protein Nkx-6.2 [Tupaia chinensis]
Length = 157
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 72 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 118
>gi|348542533|ref|XP_003458739.1| PREDICTED: homeobox protein Nkx-6.2-like [Oreochromis niloticus]
Length = 283
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
V+VWFQNRRTKWRK+HAAEMA+AK+K D +++ES + E+DD
Sbjct: 200 VKVWFQNRRTKWRKRHAAEMASAKKKHDSETEKMKESSDNEDDD 243
>gi|47223555|emb|CAF99164.1| unnamed protein product [Tetraodon nigroviridis]
Length = 189
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
V+VWFQNRRTKWRKKHAAEMATAK+KQD
Sbjct: 107 VKVWFQNRRTKWRKKHAAEMATAKKKQD 134
>gi|348587784|ref|XP_003479647.1| PREDICTED: homeobox protein Nkx-6.2-like, partial [Cavia porcellus]
Length = 361
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 185 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 231
>gi|242014688|ref|XP_002428017.1| nk-6 homeobox protein, putative [Pediculus humanus corporis]
gi|212512536|gb|EEB15279.1| nk-6 homeobox protein, putative [Pediculus humanus corporis]
Length = 90
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ----VEESEEEEEDDY-------RHSDNAAK 50
++VWFQNRRTKWRKKHAAEMATAKRKQD+ + + +EDD S AA
Sbjct: 16 IKVWFQNRRTKWRKKHAAEMATAKRKQDEQHADLNDDMSGDEDDLGRTMTTTMTSTTAAS 75
Query: 51 RLRRELAAH 59
RLR+EL H
Sbjct: 76 RLRKELGEH 84
>gi|344251647|gb|EGW07751.1| Homeobox protein Nkx-6.2 [Cricetulus griseus]
Length = 114
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%), Gaps = 6/48 (12%)
Query: 1 MVEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
+++VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 28 LLQVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 75
>gi|281352774|gb|EFB28358.1| hypothetical protein PANDA_003894 [Ailuropoda melanoleuca]
Length = 140
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 57 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 103
>gi|440902176|gb|ELR53000.1| Homeobox protein Nkx-6.2, partial [Bos grunniens mutus]
Length = 183
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 37/46 (80%), Gaps = 6/46 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDD 41
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++DD
Sbjct: 101 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDD 146
>gi|270015040|gb|EFA11488.1| hypothetical protein TcasGA2_TC014200 [Tribolium castaneum]
Length = 331
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDN--AAKR 51
V+VWFQNRRTKWRKKHAAEMATAKRKQ+ ++ +E D +++ AAKR
Sbjct: 276 VKVWFQNRRTKWRKKHAAEMATAKRKQEVLDNQTDENSDVISDTEDEHAAKR 327
>gi|195019472|ref|XP_001984988.1| GH16803 [Drosophila grimshawi]
gi|193898470|gb|EDV97336.1| GH16803 [Drosophila grimshawi]
Length = 661
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 584 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 631
>gi|189233719|ref|XP_969907.2| PREDICTED: similar to HGTX CG13475-PA [Tribolium castaneum]
Length = 295
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDN--AAKR 51
V+VWFQNRRTKWRKKHAAEMATAKRKQ+ ++ +E D +++ AAKR
Sbjct: 240 VKVWFQNRRTKWRKKHAAEMATAKRKQEVLDNQTDENSDVISDTEDEHAAKR 291
>gi|426366614|ref|XP_004050345.1| PREDICTED: uncharacterized protein LOC101137776 [Gorilla gorilla
gorilla]
Length = 829
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 38/48 (79%), Gaps = 6/48 (12%)
Query: 1 MVEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
++ VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 676 ILSVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 723
>gi|269784917|ref|NP_001161610.1| Nkx6-like transcription factor [Saccoglossus kowalevskii]
gi|268054217|gb|ACY92595.1| Nkx6-like transcription factor [Saccoglossus kowalevskii]
Length = 272
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 8/50 (16%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVE-------ESEEEEEDDYRH 44
V+VWFQNRRTKWRK+HAAEMATAK+KQ++ E E+E+ E+D RH
Sbjct: 200 VKVWFQNRRTKWRKRHAAEMATAKKKQEETENMAGDASEAEDGSEND-RH 248
>gi|195378218|ref|XP_002047881.1| GJ11683 [Drosophila virilis]
gi|194155039|gb|EDW70223.1| GJ11683 [Drosophila virilis]
Length = 638
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 557 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 604
>gi|50540018|ref|NP_001002475.1| homeobox protein Nkx-6.1 [Danio rerio]
gi|49901142|gb|AAH76337.1| NK6 transcription factor related, locus 1 (Drosophila) [Danio
rerio]
gi|182888702|gb|AAI64096.1| Nkx6.1 protein [Danio rerio]
Length = 312
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRRTKWRK+HAAEMA+AK+KQD E
Sbjct: 230 VKVWFQNRRTKWRKRHAAEMASAKKKQDSETE 261
>gi|332252788|ref|XP_003275538.1| PREDICTED: homeobox protein Nkx-6.2 [Nomascus leucogenys]
Length = 259
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRRTKWRK+HAAEMA+AK+KQD E
Sbjct: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAE 223
>gi|40806470|gb|AAR92144.1| transcription factor Nkx6.1 [Danio rerio]
Length = 312
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRRTKWRK+HAAEMA+AK+KQD E
Sbjct: 230 VKVWFQNRRTKWRKRHAAEMASAKKKQDSETE 261
>gi|354497041|ref|XP_003510631.1| PREDICTED: hypothetical protein LOC100759750 [Cricetulus griseus]
Length = 374
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 6/45 (13%)
Query: 4 VWFQNRRTKWRKKHAAEMATAKRKQDQVEE------SEEEEEDDY 42
VWFQNRRTKWRK+HAAEMA+AK+KQD E S+ E++D+Y
Sbjct: 291 VWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 335
>gi|301616793|ref|XP_002937836.1| PREDICTED: homeobox protein Nkx-6.2 [Xenopus (Silurana) tropicalis]
Length = 281
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRRTKWRK+HAAEMATAK+K D E
Sbjct: 198 VKVWFQNRRTKWRKRHAAEMATAKKKHDSETE 229
>gi|70570365|dbj|BAE06586.1| transcription factor protein [Ciona intestinalis]
Length = 347
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD-----QVEESEEEEEDDYRHSDNAAKRLRREL 56
V+VWFQNRRTKWRK+HAAEMATAK++QD +V+E E E + R S + +R
Sbjct: 116 VKVWFQNRRTKWRKRHAAEMATAKKRQDGEISLKVKERERGESEGQRESVSGENSTQRPF 175
>gi|3983416|gb|AAC83926.1| homeodomain protein [Gallus gallus]
Length = 153
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
V+VWFQNRRTKWRKKHAAEMATAK+KQD
Sbjct: 69 VKVWFQNRRTKWRKKHAAEMATAKKKQD 96
>gi|327267638|ref|XP_003218606.1| PREDICTED: hypothetical protein LOC100552384 [Anolis carolinensis]
Length = 273
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ-----VEESEEEEEDDY 42
+ VWFQNRRTKWRK+HAAEMA+AK+K D E SE E++DDY
Sbjct: 107 INVWFQNRRTKWRKRHAAEMASAKKKHDSETEKLKESSENEDDDDY 152
>gi|198429111|ref|XP_002127499.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 456
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD-----QVEESEEEEEDDYRHSDNAAKRLRR 54
V+VWFQNRRTKWRK+HAAEMATAK++QD +V+E E E + R S + +R
Sbjct: 225 VKVWFQNRRTKWRKRHAAEMATAKKRQDGEISLKVKERERGESEGQRESVSGENSTQR 282
>gi|198465611|ref|XP_001353698.2| GA12313 [Drosophila pseudoobscura pseudoobscura]
gi|198150238|gb|EAL29431.2| GA12313 [Drosophila pseudoobscura pseudoobscura]
Length = 621
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 543 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSENMDSDNES 590
>gi|402881871|ref|XP_003904483.1| PREDICTED: uncharacterized protein LOC101017162 [Papio anubis]
Length = 586
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD------QVEESEEEEEDDY 42
V+VWFQNRRTKWRK+HAAEMA+AK+KQD +V S+ E++D+Y
Sbjct: 501 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 547
>gi|157104230|ref|XP_001648312.1| hypothetical protein AaeL_AAEL004005 [Aedes aegypti]
gi|108880427|gb|EAT44652.1| AAEL004005-PA [Aedes aegypti]
Length = 72
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 1 MVEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
+ VWFQNRRTKWRKKHAAEMATAKRK D++ + +
Sbjct: 3 LFNVWFQNRRTKWRKKHAAEMATAKRKHDELGDGD 37
>gi|195172469|ref|XP_002027020.1| GL20983 [Drosophila persimilis]
gi|194112792|gb|EDW34835.1| GL20983 [Drosophila persimilis]
Length = 612
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 534 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSENMDSDNES 581
>gi|432901746|ref|XP_004076926.1| PREDICTED: homeobox protein Nkx-6.1-like [Oryzias latipes]
Length = 249
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
V+VWFQNRRTKWRK+HAAEMA+AK+K D +++ES E E+DD
Sbjct: 165 VKVWFQNRRTKWRKRHAAEMASAKKKHDSETEKMKESSENEDDD 208
>gi|312377611|gb|EFR24407.1| hypothetical protein AND_27632 [Anopheles darlingi]
Length = 77
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 4 VWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
VWFQNRRTKWRKKHAAEMATAKRKQ+++ + + + D
Sbjct: 11 VWFQNRRTKWRKKHAAEMATAKRKQEELGDGDGDCSD 47
>gi|195590252|ref|XP_002084860.1| GD12614 [Drosophila simulans]
gi|194196869|gb|EDX10445.1| GD12614 [Drosophila simulans]
Length = 644
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 567 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 614
>gi|194870860|ref|XP_001972735.1| GG13719 [Drosophila erecta]
gi|190654518|gb|EDV51761.1| GG13719 [Drosophila erecta]
Length = 600
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 520 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 567
>gi|363733401|ref|XP_003641244.1| PREDICTED: uncharacterized protein LOC395752, partial [Gallus
gallus]
Length = 557
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+KQD E + D+
Sbjct: 499 VKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASDN 538
>gi|19528431|gb|AAL90330.1| RE18506p [Drosophila melanogaster]
Length = 480
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 403 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 450
>gi|195327570|ref|XP_002030491.1| GM24540 [Drosophila sechellia]
gi|194119434|gb|EDW41477.1| GM24540 [Drosophila sechellia]
Length = 606
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 529 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 576
>gi|149612162|ref|XP_001510916.1| PREDICTED: homeobox protein Nkx-6.2-like, partial
[Ornithorhynchus anatinus]
Length = 82
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 35/42 (83%), Gaps = 4/42 (9%)
Query: 4 VWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
VWFQNRRTKWRK+HAAEMA+AK+K D +++ES + E+DD
Sbjct: 1 VWFQNRRTKWRKRHAAEMASAKKKHDSETEKLKESSDNEDDD 42
>gi|195454819|ref|XP_002074420.1| GK10592 [Drosophila willistoni]
gi|194170505|gb|EDW85406.1| GK10592 [Drosophila willistoni]
Length = 499
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 426 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 473
>gi|170030801|ref|XP_001843276.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167868395|gb|EDS31778.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 69
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 4 VWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
VWFQNRRTKWRKKHAAEMATAKRKQ+++ + +
Sbjct: 2 VWFQNRRTKWRKKHAAEMATAKRKQEELGDGD 33
>gi|6319111|gb|AAF07173.1|AF189767_1 homeodomain protein [Gallus gallus]
Length = 82
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 35/42 (83%), Gaps = 4/42 (9%)
Query: 4 VWFQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
VWFQNRRTKWRK+HAAEMA+AK+K D +++ES + E+DD
Sbjct: 1 VWFQNRRTKWRKRHAAEMASAKKKHDSETEKLKESSDNEDDD 42
>gi|21358053|ref|NP_652614.1| HGTX [Drosophila melanogaster]
gi|6969438|gb|AAF33780.1|AF220236_1 GTX/Nkx6B-like homeodomain protein [Drosophila melanogaster]
gi|23093480|gb|AAF49729.3| HGTX [Drosophila melanogaster]
gi|54650596|gb|AAV36877.1| RE53769p [Drosophila melanogaster]
gi|66571254|gb|AAY51592.1| IP01125p [Drosophila melanogaster]
gi|220943318|gb|ACL84202.1| HGTX-PA [synthetic construct]
gi|220943456|gb|ACL84271.1| HGTX-PA [synthetic construct]
gi|220953300|gb|ACL89193.1| HGTX-PA [synthetic construct]
Length = 513
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 436 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 483
>gi|195494329|ref|XP_002094793.1| GE20015 [Drosophila yakuba]
gi|194180894|gb|EDW94505.1| GE20015 [Drosophila yakuba]
Length = 608
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 530 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 577
>gi|143347034|gb|ABO93211.1| Nk6 [Platynereis dumerilii]
Length = 287
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 31/33 (93%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
V+VWFQNRRTKWRK+HAAEMATAK++Q++ E+
Sbjct: 222 VKVWFQNRRTKWRKRHAAEMATAKKRQEERAEA 254
>gi|72011193|ref|XP_782231.1| PREDICTED: homeobox protein Nkx-6.1-like [Strongylocentrotus
purpuratus]
Length = 365
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 29/41 (70%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDY 42
V+VWFQNRRTKWRKKHAAEM+ AKRK D + D Y
Sbjct: 235 VKVWFQNRRTKWRKKHAAEMSAAKRKHDSNHHTPSTTTDHY 275
>gi|195129153|ref|XP_002009023.1| GI13817 [Drosophila mojavensis]
gi|193920632|gb|EDW19499.1| GI13817 [Drosophila mojavensis]
Length = 527
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 448 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 495
>gi|194747946|ref|XP_001956410.1| GF25192 [Drosophila ananassae]
gi|190623692|gb|EDV39216.1| GF25192 [Drosophila ananassae]
Length = 522
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWFQNRRTKWRK+HAAEMATAKRKQD + + + + SDN +
Sbjct: 446 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSEAMDSDNES 493
>gi|432949468|ref|XP_004084225.1| PREDICTED: homeobox protein Nkx-6.1-like, partial [Oryzias latipes]
Length = 215
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRRTKWRKKHAAEMA+AK+KQD E
Sbjct: 129 VKVWFQNRRTKWRKKHAAEMASAKKKQDSETE 160
>gi|208401104|gb|ACI26668.1| NK-like homeobox protein 6 [Capitella teleta]
Length = 146
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 29/29 (100%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V+VWFQNRRTKWRK+HAAEMA+AKRKQ++
Sbjct: 57 VKVWFQNRRTKWRKRHAAEMASAKRKQEE 85
>gi|260828237|ref|XP_002609070.1| nk homeobox 6 [Branchiostoma floridae]
gi|229294424|gb|EEN65080.1| nk homeobox 6 [Branchiostoma floridae]
Length = 291
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 35/50 (70%), Gaps = 10/50 (20%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK----------QDQVEESEEEEEDD 41
V+VWFQNRRTKWRKKHAAEMATAK+K QD E SE E+ +D
Sbjct: 203 VKVWFQNRRTKWRKKHAAEMATAKKKQEEQQKQMAAQDGEENSEPEDLED 252
>gi|391345554|ref|XP_003747050.1| PREDICTED: homeobox protein Nkx-6.3-like [Metaseiulus occidentalis]
Length = 195
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 25/33 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
V+VWFQNRRTKWRKKHAAEMAT K+ S
Sbjct: 120 VKVWFQNRRTKWRKKHAAEMATVKQHSRPTPGS 152
>gi|156353253|ref|XP_001622987.1| predicted protein [Nematostella vectensis]
gi|156209628|gb|EDO30887.1| predicted protein [Nematostella vectensis]
Length = 107
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDD 41
V+VWFQNRRTKWRK+HAAEM KRK+ ES EE D+
Sbjct: 50 VKVWFQNRRTKWRKRHAAEM-NIKRKEISGNESSHEESDN 88
>gi|426253493|ref|XP_004020427.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 40
[Ovis aries]
Length = 3335
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 4 VWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
VWFQNRRTK RK+HAAEMA+AK+KQD E
Sbjct: 3300 VWFQNRRTKRRKRHAAEMASAKKKQDSDAE 3329
>gi|326924169|ref|XP_003208304.1| PREDICTED: homeobox protein Nkx-6.2-like [Meleagris gallopavo]
Length = 93
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 33/40 (82%), Gaps = 4/40 (10%)
Query: 6 FQNRRTKWRKKHAAEMATAKRKQD----QVEESEEEEEDD 41
++NRRTKWRK+HAAEMA+AK+K D +++ES + E+DD
Sbjct: 14 YENRRTKWRKRHAAEMASAKKKHDSETEKLKESSDNEDDD 53
>gi|449270881|gb|EMC81529.1| Homeobox protein Nkx-6.3 [Columba livia]
Length = 261
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK------QDQVEESEEEEEDDYRHSDNAAKRLRRE 55
V+VWFQNRRTKWRKK A E +++ ++ + E+E++E + D+ +++R
Sbjct: 184 VKVWFQNRRTKWRKKSALEPSSSSQRAGGSGGERAASEAEDDEYNKPLDPDSDDEKIRLL 243
Query: 56 LAAH 59
L H
Sbjct: 244 LRKH 247
>gi|118101394|ref|XP_428808.2| PREDICTED: homeobox protein Nkx-6.3-like [Gallus gallus]
Length = 259
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK------QDQVEESEEEEEDDYRHSDNAAKRLRRE 55
V+VWFQNRRTKWRKK A E +++ ++ + E+E++E + D+ +++R
Sbjct: 182 VKVWFQNRRTKWRKKSALEPSSSSQRVGGSSGERAASETEDDEYNKPLDPDSDDEKIRLL 241
Query: 56 LAAH 59
L H
Sbjct: 242 LRKH 245
>gi|326932699|ref|XP_003212451.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.3-like
[Meleagris gallopavo]
Length = 259
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK------QDQVEESEEEEEDDYRHSDNAAKRLRRE 55
V+VWFQNRRTKWRKK A E +++ ++ + E+E++E + D+ +++R
Sbjct: 182 VKVWFQNRRTKWRKKSALEPSSSSQRAGGSSGERAASETEDDEYNKPLDPDSDDEKIRLL 241
Query: 56 LAAH 59
L H
Sbjct: 242 LRKH 245
>gi|224080928|ref|XP_002194803.1| PREDICTED: homeobox protein Nkx-6.3 [Taeniopygia guttata]
Length = 260
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK------QDQVEESEEEEEDDYRHSDNAAKRLRRE 55
V+VWFQNRRTKWRKK A E +++ ++ + E+E++E + D+ +++R
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSSQRAGGSGGERAASETEDDEYNKPLDPDSDDEKIRLL 242
Query: 56 LAAH 59
L H
Sbjct: 243 LRKH 246
>gi|339245637|ref|XP_003378744.1| homeobox protein Nkx-6.2 [Trichinella spiralis]
gi|316972332|gb|EFV56011.1| homeobox protein Nkx-6.2 [Trichinella spiralis]
Length = 236
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRRTKWRK+ A++MA AK QD++
Sbjct: 191 VKVWFQNRRTKWRKQEASQMAKAKNDQDRL 220
>gi|260764005|ref|NP_001159612.1| homeobox protein Nkx-6.3 [Danio rerio]
Length = 272
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK--RKQDQVEESEEEEEDDYRHS----DNAAKRLRRE 55
V+VWFQNRRTKWRKK A E ++ + R + + SE E ED+ + D +++R+
Sbjct: 195 VKVWFQNRRTKWRKKSATEPSSTQTSRGESAGDGSENEVEDEEYNKPLDPDTDDEKIRQL 254
Query: 56 LAAH 59
L H
Sbjct: 255 LRKH 258
>gi|358254552|dbj|GAA55790.1| homeobox protein Nkx-6.1, partial [Clonorchis sinensis]
Length = 358
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+VWFQNRRTKWRKK+AA+M T++ K
Sbjct: 53 VKVWFQNRRTKWRKKNAADMVTSRAK 78
>gi|410922058|ref|XP_003974500.1| PREDICTED: homeobox protein Nkx-6.3-like [Takifugu rubripes]
Length = 271
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ-----DQVE-ESEEEEEDDYRHSDNAAKRLRRE 55
V+VWFQNRRTKWRKK A+E ++ + Q D E E E+EE + D+ ++R
Sbjct: 194 VKVWFQNRRTKWRKKSASEPSSTQSSQGAPGGDTSENEVEDEEYNKPLDPDSDDDKIRLL 253
Query: 56 LAAH 59
L H
Sbjct: 254 LRKH 257
>gi|348530446|ref|XP_003452722.1| PREDICTED: homeobox protein Nkx-6.3-like [Oreochromis niloticus]
Length = 271
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD--QVEESEEEEEDD 41
V+VWFQNRRTKWRKK A+E ++ + E SE E ED+
Sbjct: 194 VKVWFQNRRTKWRKKSASEPSSTQTNHSGPAGEASENEVEDE 235
>gi|334312060|ref|XP_001381916.2| PREDICTED: homeobox protein Nkx-6.3-like [Monodelphis domestica]
Length = 262
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV------EESEEEEEDDYRH---SDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ + V + E E+D+Y D+ +++
Sbjct: 182 VKVWFQNRRTKWRKKSALEPSSSTTRSTGVGSGGGDRTASENEDDEYNKPLDPDSDDEKI 241
Query: 53 RRELAAH 59
R L H
Sbjct: 242 RLLLRKH 248
>gi|432875200|ref|XP_004072724.1| PREDICTED: homeobox protein Nkx-6.3-like [Oryzias latipes]
Length = 270
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ--DQVEESEEEEEDD 41
V+VWFQNRRTKWRKK A+E + + E SE E ED+
Sbjct: 193 VKVWFQNRRTKWRKKSASEPTSTQASHVGQGGEASENEVEDE 234
>gi|297491289|ref|XP_002698770.1| PREDICTED: homeobox protein Nkx-6.3 [Bos taurus]
gi|296472355|tpg|DAA14470.1| TPA: Homeobox protein Nkx-6.3-like [Bos taurus]
Length = 263
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK---------QDQVEESEEEEEDDYRHSDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ + + E+E++E + D+ +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGSAGAGGERAASETEDDEYNKPLDPDSDDEKI 242
Query: 53 RRELAAH 59
R L H
Sbjct: 243 RLLLRKH 249
>gi|119918251|ref|XP_001252698.1| PREDICTED: homeobox protein Nkx-6.3 [Bos taurus]
Length = 263
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK---------QDQVEESEEEEEDDYRHSDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ + + E+E++E + D+ +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGSAGAGGERAASETEDDEYNKPLDPDSDDEKI 242
Query: 53 RRELAAH 59
R L H
Sbjct: 243 RLLLRKH 249
>gi|440901038|gb|ELR52042.1| Homeobox protein Nkx-6.3, partial [Bos grunniens mutus]
Length = 241
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK---------QDQVEESEEEEEDDYRHSDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ + + E+E++E + D+ +++
Sbjct: 161 VKVWFQNRRTKWRKKSALEPSSSTPRAPGSAGAGGERAASETEDDEYNKPLDPDSDDEKI 220
Query: 53 RRELAAH 59
R L H
Sbjct: 221 RLLLRKH 227
>gi|32563844|ref|NP_871915.1| Protein COG-1, isoform b [Caenorhabditis elegans]
gi|25807947|gb|AAN72827.1| COG-1B [Caenorhabditis elegans]
gi|28170696|emb|CAD62039.1| Protein COG-1, isoform b [Caenorhabditis elegans]
Length = 106
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRRTKWRKK AA+ A KR
Sbjct: 63 VKVWFQNRRTKWRKKEAADNALVKR 87
>gi|350594608|ref|XP_003483932.1| PREDICTED: homeobox protein Nkx-6.3-like [Sus scrofa]
Length = 261
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK-------QDQVEESEEEEEDDYRHSDNAAKRLRR 54
V+VWFQNRRTKWRKK A E +++ + E+E++E + D+ +++R
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGGDRPASENEDDEYNKPLDPDSDDEKIRL 242
Query: 55 ELAAH 59
L H
Sbjct: 243 LLRKH 247
>gi|12858513|dbj|BAB31342.1| unnamed protein product [Mus musculus]
Length = 262
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK----QDQVEESEEEEEDDYRH-----SDNAAKR- 51
V+VWFQNRRTKWRKK A E +++ + + E E+D+Y SDN R
Sbjct: 184 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGASGDRAASENEDDEYNKPLDPDSDNEKIRL 243
Query: 52 -LRRELAA 58
LR+ AA
Sbjct: 244 LLRKHRAA 251
>gi|426256594|ref|XP_004021924.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.3 [Ovis
aries]
Length = 263
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK---------QDQVEESEEEEEDDYRHSDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ + + E+E++E + D+ +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGSAGAGGERAASETEDDEYNKPLDPDSDDEKI 242
Query: 53 RRELAAH 59
R L H
Sbjct: 243 RLLLRKH 249
>gi|268533120|ref|XP_002631688.1| C. briggsae CBR-COG-1 protein [Caenorhabditis briggsae]
Length = 261
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRRTKWRKK AA+ A KR
Sbjct: 219 VKVWFQNRRTKWRKKEAADNALVKR 243
>gi|256072062|ref|XP_002572356.1| nk-6 homeobox protein [Schistosoma mansoni]
gi|353231838|emb|CCD79193.1| putative nk-6 homeobox protein [Schistosoma mansoni]
Length = 651
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/24 (75%), Positives = 23/24 (95%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRRTKWRKK+AAEM +++
Sbjct: 543 VKVWFQNRRTKWRKKNAAEMMSSR 566
>gi|47213210|emb|CAF95326.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRRTKWRKK A+E ++ +
Sbjct: 194 VKVWFQNRRTKWRKKSASEPSSTQ 217
>gi|341899010|gb|EGT54945.1| CBN-COG-1 protein [Caenorhabditis brenneri]
Length = 264
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRRTKWRKK AA+ A KR
Sbjct: 222 VKVWFQNRRTKWRKKEAADNALVKR 246
>gi|341892211|gb|EGT48146.1| hypothetical protein CAEBREN_16986 [Caenorhabditis brenneri]
Length = 264
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRRTKWRKK AA+ A KR
Sbjct: 222 VKVWFQNRRTKWRKKEAADNALVKR 246
>gi|354482360|ref|XP_003503366.1| PREDICTED: homeobox protein Nkx-6.3-like [Cricetulus griseus]
gi|344238925|gb|EGV95028.1| Homeobox protein Nkx-6.3 [Cricetulus griseus]
Length = 262
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK-RKQDQV---EESEEEEEDDYRH---SDNAAKRLRR 54
V+VWFQNRRTKWRKK A E +++ R Q + E E+D+Y D+ +++R
Sbjct: 184 VKVWFQNRRTKWRKKSALEPSSSTPRAQGGAGGDRAASENEDDEYNKPLDPDSDDEKIRL 243
Query: 55 ELAAH 59
L H
Sbjct: 244 LLRKH 248
>gi|301606315|ref|XP_002932753.1| PREDICTED: homeobox protein Nkx-6.3-like [Xenopus (Silurana)
tropicalis]
Length = 255
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEM----ATAKRKQDQVEESEEEEEDDYRH---SDNAAKRLRR 54
V+VWFQNRRTKWRKK A E + + R + S E E+D+Y D+ +++R
Sbjct: 178 VKVWFQNRRTKWRKKSAVETPGLPSLSTRGPGDLTPS-ENEDDEYSKPLDPDSDDEKIRL 236
Query: 55 ELAAH 59
L H
Sbjct: 237 LLRKH 241
>gi|157822463|ref|NP_001102925.1| homeobox protein Nkx-6.3 [Rattus norvegicus]
gi|149057784|gb|EDM09027.1| rCG42989 [Rattus norvegicus]
Length = 262
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK-------QDQVEESEEEEEDDYRHSDNAAKRLRR 54
V+VWFQNRRTKWRKK A E +++ + E+E++E + D+ +++R
Sbjct: 184 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGASGDRAASENEDDEYNKPLDPDSDDEKIRL 243
Query: 55 ELAAH 59
L H
Sbjct: 244 LLRKH 248
>gi|68510382|gb|AAY98485.1| NKX6-3 [Mus musculus]
Length = 262
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK-------QDQVEESEEEEEDDYRHSDNAAKRLRR 54
V+VWFQNRRTKWRKK A E +++ + E+E++E + D+ +++R
Sbjct: 184 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGASGDRAASENEDDEYNKPLDPDSDDEKIRL 243
Query: 55 ELAAH 59
L H
Sbjct: 244 LLRKH 248
>gi|71993021|ref|NP_001022264.1| Protein COG-1, isoform a [Caenorhabditis elegans]
gi|9367144|emb|CAB05260.2| Protein COG-1, isoform a [Caenorhabditis elegans]
gi|25807945|gb|AAN72826.1| COG-1A [Caenorhabditis elegans]
Length = 256
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRRTKWRKK AA+ A KR
Sbjct: 213 VKVWFQNRRTKWRKKEAADNALVKR 237
>gi|395857519|ref|XP_003801139.1| PREDICTED: homeobox protein Nkx-6.3 [Otolemur garnettii]
Length = 263
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK-RKQDQV-----EESEEEEEDDYRH---SDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ R Q + E E+D+Y D+ +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAQGTAGAGGDRAASETEDDEYNKPLDPDSDDEKI 242
Query: 53 RRELAAH 59
R L H
Sbjct: 243 RLLLRKH 249
>gi|198278517|ref|NP_083278.1| homeobox protein Nkx-6.3 [Mus musculus]
gi|123794601|sp|Q3UHX8.1|NKX63_MOUSE RecName: Full=Homeobox protein Nkx-6.3
gi|74151216|dbj|BAE27728.1| unnamed protein product [Mus musculus]
gi|148700922|gb|EDL32869.1| mCG13087 [Mus musculus]
gi|187954347|gb|AAI40995.1| NK6 homeobox 3 [Mus musculus]
Length = 262
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK-------QDQVEESEEEEEDDYRHSDNAAKRLRR 54
V+VWFQNRRTKWRKK A E +++ + E+E++E + D+ +++R
Sbjct: 184 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGASGDRAASENEDDEYNKPLDPDSDDEKIRL 243
Query: 55 ELAAH 59
L H
Sbjct: 244 LLRKH 248
>gi|73979193|ref|XP_849158.1| PREDICTED: homeobox protein Nkx-6.3 [Canis lupus familiaris]
Length = 262
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA--------KRKQDQVEESEEEEEDDYRHSDNAAKRLR 53
V+VWFQNRRTKWRKK A E +++ + E+E++E + D+ +++R
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAAGGGGGGERAASETEDDEYNKPLDPDSDDEKIR 242
Query: 54 RELAAH 59
L H
Sbjct: 243 LLLRKH 248
>gi|327283061|ref|XP_003226260.1| PREDICTED: hypothetical protein LOC100565849 [Anolis carolinensis]
Length = 540
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSD 46
V++WFQNRR KW+K++ + A R++ + E E +E+ + R D
Sbjct: 493 VKIWFQNRRMKWKKENNKDKFPAARQEGEDTEKEAQEDVEGRVED 537
>gi|308502996|ref|XP_003113682.1| CRE-COG-1 protein [Caenorhabditis remanei]
gi|308263641|gb|EFP07594.1| CRE-COG-1 protein [Caenorhabditis remanei]
Length = 261
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRRTKWRKK AA+ A KR
Sbjct: 219 VKVWFQNRRTKWRKKEAADNALVKR 243
>gi|351714079|gb|EHB16998.1| Homeobox protein Nkx-6.3 [Heterocephalus glaber]
Length = 263
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES------EEEEEDDYRH---SDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ + + E E+D+Y D+ +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGGDHAPSENEDDEYNKPLDPDSDDEKI 242
Query: 53 RRELAAH 59
R L H
Sbjct: 243 RLLLRKH 249
>gi|344281588|ref|XP_003412560.1| PREDICTED: homeobox protein Nkx-6.3-like [Loxodonta africana]
Length = 263
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK---------QDQVEESEEEEEDDYRHSDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ + E+E++E + D+ +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGTGAAGDRAASENEDDEYNKPLDPDSDDEKI 242
Query: 53 RRELAAH 59
R L H
Sbjct: 243 RLLLRKH 249
>gi|444731055|gb|ELW71422.1| Homeobox protein Nkx-6.3 [Tupaia chinensis]
Length = 242
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 13/70 (18%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA------KRKQDQVEESEEEEEDDYRH-----SDNAAK 50
V+VWFQNRRTKWRKK A E +++ + E E+D+Y SD+
Sbjct: 162 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGGDRATSETEDDEYNKPLDPDSDDEKI 221
Query: 51 R--LRRELAA 58
R LR+ AA
Sbjct: 222 RLLLRKRRAA 231
>gi|312081473|ref|XP_003143043.1| hypothetical protein LOAG_07462 [Loa loa]
gi|307761794|gb|EFO21028.1| hypothetical protein LOAG_07462 [Loa loa]
Length = 51
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 20/25 (80%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
+VWFQNRRTKWRKK AA+ A KR
Sbjct: 3 FQVWFQNRRTKWRKKEAADNALVKR 27
>gi|153791285|ref|NP_001093371.1| homeobox protein Nkx-6.3 [Xenopus laevis]
gi|160417313|sp|A5YC49.1|NKX63_XENLA RecName: Full=Homeobox protein Nkx-6.3
gi|148540781|gb|ABQ86051.1| NK6 transcription factor related locus 3 [Xenopus laevis]
Length = 254
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMA-----TAKRKQDQVEESEEEEE 39
V+VWFQNRRTKWRKK A E + + D + E++E
Sbjct: 177 VKVWFQNRRTKWRKKSAVETPGLPSLSTRAPGDLIPSDNEDDE 219
>gi|403303660|ref|XP_003942443.1| PREDICTED: homeobox protein Nkx-6.3 [Saimiri boliviensis
boliviensis]
Length = 263
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA------KRKQDQVEESEEEEEDDYRH---SDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ E E+D+Y D+ +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGGGAGGDRAPSENEDDEYNKPLDPDSDDEKI 242
Query: 53 RRELAAH 59
R L H
Sbjct: 243 RLLLRKH 249
>gi|291409043|ref|XP_002720842.1| PREDICTED: NK6 homeobox 3 [Oryctolagus cuniculus]
Length = 263
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA---------KRKQDQVEESEEEEEDDYRHSDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ E+E++E + D+ +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRGPGGAGAGGDRAASETEDDEYNKPLDPDSDDEKI 242
Query: 53 RRELAAH 59
R L H
Sbjct: 243 RLLLRKH 249
>gi|296222091|ref|XP_002757038.1| PREDICTED: homeobox protein Nkx-6.3 [Callithrix jacchus]
Length = 263
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA------KRKQDQVEESEEEEEDDYRH---SDNAAKRL 52
V+VWFQNRRTKWRKK A E +++ E E+D+Y D+ +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGGDRAPSENEDDEYNKPLDPDSDDEKI 242
Query: 53 RRELAAH 59
R L H
Sbjct: 243 RLLLRKH 249
>gi|119918249|ref|XP_605772.3| PREDICTED: homeobox protein Nkx-6.3-like [Bos taurus]
Length = 137
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV-----EESEEEEEDD 41
V+VWFQNRRTKWRKK A E +++ + E + E EDD
Sbjct: 57 VKVWFQNRRTKWRKKSALEPSSSTPRAPGSAGAGGERAASETEDD 101
>gi|114619910|ref|XP_001138968.1| PREDICTED: homeobox protein Nkx-6.3 [Pan troglodytes]
gi|397505608|ref|XP_003823347.1| PREDICTED: homeobox protein Nkx-6.3 [Pan paniscus]
Length = 265
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK--------QDQVEESEEEEEDDYRH---SDNAAK 50
V+VWFQNRRTKWRKK A E +++ + E E+D+Y D+ +
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGAGGDGAPSENEDDEYNKPLDPDSDDE 242
Query: 51 RLRRELAAH 59
++R L H
Sbjct: 243 KIRLLLRKH 251
>gi|297682767|ref|XP_002819082.1| PREDICTED: homeobox protein Nkx-6.3 [Pongo abelii]
Length = 266
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA--------KRKQDQVEESEEEEEDDYRH---SDNAAK 50
V+VWFQNRRTKWRKK A E +++ E E+D+Y D+ +
Sbjct: 184 VKVWFQNRRTKWRKKSALEPSSSTPRAPGSAGAGAGGDRAPSENEDDEYNKPLDPDSDDE 243
Query: 51 RLRRELAAH 59
++R L H
Sbjct: 244 KIRLLLRKH 252
>gi|410956358|ref|XP_003984809.1| PREDICTED: homeobox protein Nkx-6.3 [Felis catus]
Length = 263
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V+VWFQNRRTKWRKK A E +++
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSS 205
>gi|332240996|ref|XP_003269673.1| PREDICTED: homeobox protein Nkx-6.3 [Nomascus leucogenys]
Length = 265
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA--------KRKQDQVEESEEEEEDDYRH---SDNAAK 50
V+VWFQNRRTKWRKK A E +++ E E+D+Y D+ +
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGAGGDRAPSENEDDEYNKPLDPDSDDE 242
Query: 51 RLRRELAAH 59
++R L H
Sbjct: 243 KIRLLLRKH 251
>gi|149410752|ref|XP_001510049.1| PREDICTED: homeobox protein Nkx-6.3-like [Ornithorhynchus anatinus]
Length = 265
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV--------EESEEEEEDDYRH---SDNAAK 50
V+VWFQNRRTKWRKK A E +++ + + E E+D+Y D+ +
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRSAAGGGGGGSGDRTASENEDDEYNKPLDPDSDDE 242
Query: 51 RLRRELAAH 59
++R L H
Sbjct: 243 KIRLLLRKH 251
>gi|431902229|gb|ELK08730.1| Homeobox protein Nkx-6.3, partial [Pteropus alecto]
Length = 282
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK--------QDQVEESEEEEEDDYRH---SDNAAK 50
V+VWFQNRRTKWRKK A E +++ + + E E+D+Y D+ +
Sbjct: 200 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGSGGDRAASENEDDEYNKPLDPDSDDE 259
Query: 51 RLRRELAAH 59
++R L H
Sbjct: 260 KIRLLLRKH 268
>gi|291227447|ref|XP_002733707.1| PREDICTED: BarH-like homeobox 2-like, partial [Saccoglossus
kowalevskii]
Length = 273
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
++ WFQNRRTKW+K+ A M A+R+
Sbjct: 192 IKTWFQNRRTKWKKQMTARMKIAQRQ 217
>gi|160417300|sp|A6NJ46.1|NKX63_HUMAN RecName: Full=Homeobox protein Nkx-6.3
gi|119583655|gb|EAW63251.1| hypothetical protein FLJ25169, isoform CRA_a [Homo sapiens]
Length = 265
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA--------KRKQDQVEESEEEEEDDYRH---SDNAAK 50
V+VWFQNRRTKWRKK A E +++ E E+D+Y D+ +
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGAGGDRAPSENEDDEYNKPLDPDSDDE 242
Query: 51 RLRRELAAH 59
++R L H
Sbjct: 243 KIRLLLRKH 251
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 2 VEVWFQNRRTKWRK----KHAAEMATAKR-KQDQVEESEEEEED 40
V+VWFQNRR KWRK KH T ++ QD+++ EE E+
Sbjct: 93 VQVWFQNRRAKWRKMERMKHDHTKGTKQQTNQDKIDTQEESTEN 136
>gi|301766330|ref|XP_002918594.1| PREDICTED: homeobox protein Nkx-6.3-like [Ailuropoda melanoleuca]
Length = 280
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA------KRKQDQVEESEEEEEDDY 42
V+VWFQNRRTKWRKK A E +++ + E E+D+Y
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGPGAGGERAASENEDDEY 229
>gi|402878087|ref|XP_003902735.1| PREDICTED: homeobox protein Nkx-6.3 [Papio anubis]
Length = 265
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA--------KRKQDQVEESEEEEEDDYRH---SDNAAK 50
V+VWFQNRRTKWRKK A E +++ E E+D+Y D+ +
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGAGGDRAPSENEDDEYNKPLDPDSDDE 242
Query: 51 RLRRELAAH 59
++R L H
Sbjct: 243 KIRLLLRKH 251
>gi|109086241|ref|XP_001094557.1| PREDICTED: homeobox protein Nkx-6.3-like [Macaca mulatta]
gi|355697897|gb|EHH28445.1| Homeobox protein Nkx-6.3 [Macaca mulatta]
gi|355779656|gb|EHH64132.1| Homeobox protein Nkx-6.3 [Macaca fascicularis]
Length = 265
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA--------KRKQDQVEESEEEEEDDYRH---SDNAAK 50
V+VWFQNRRTKWRKK A E +++ E E+D+Y D+ +
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGAGGDRAPSENEDDEYNKPLDPDSDDE 242
Query: 51 RLRRELAAH 59
++R L H
Sbjct: 243 KIRLLLRKH 251
>gi|258504431|gb|ACV72876.1| COG-1 [Caenorhabditis remanei]
Length = 230
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRRTKWRKK AA+ A KR
Sbjct: 200 VKVWFQNRRTKWRKKEAADNALVKR 224
>gi|426359463|ref|XP_004046993.1| PREDICTED: homeobox protein Nkx-6.3 [Gorilla gorilla gorilla]
Length = 265
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA--------KRKQDQVEESEEEEEDDYRH---SDNAAK 50
V+VWFQNRRTKWRKK A E +++ E E+D+Y D+ +
Sbjct: 183 VKVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGAGGDRAPSENEDDEYNKPLDPDSDDE 242
Query: 51 RLRRELAAH 59
++R L H
Sbjct: 243 KIRLLLRKH 251
>gi|258504417|gb|ACV72869.1| COG-1 [Caenorhabditis remanei]
gi|258504419|gb|ACV72870.1| COG-1 [Caenorhabditis remanei]
gi|258504421|gb|ACV72871.1| COG-1 [Caenorhabditis remanei]
gi|258504423|gb|ACV72872.1| COG-1 [Caenorhabditis remanei]
gi|258504425|gb|ACV72873.1| COG-1 [Caenorhabditis remanei]
gi|258504427|gb|ACV72874.1| COG-1 [Caenorhabditis remanei]
gi|258504429|gb|ACV72875.1| COG-1 [Caenorhabditis remanei]
gi|258504433|gb|ACV72877.1| COG-1 [Caenorhabditis remanei]
gi|258504435|gb|ACV72878.1| COG-1 [Caenorhabditis remanei]
gi|258504437|gb|ACV72879.1| COG-1 [Caenorhabditis remanei]
gi|258504439|gb|ACV72880.1| COG-1 [Caenorhabditis remanei]
gi|258504443|gb|ACV72882.1| COG-1 [Caenorhabditis remanei]
gi|258504445|gb|ACV72883.1| COG-1 [Caenorhabditis remanei]
gi|258504447|gb|ACV72884.1| COG-1 [Caenorhabditis remanei]
Length = 230
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRRTKWRKK AA+ A KR
Sbjct: 200 VKVWFQNRRTKWRKKEAADNALVKR 224
>gi|258504441|gb|ACV72881.1| COG-1 [Caenorhabditis remanei]
Length = 230
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRRTKWRKK AA+ A KR
Sbjct: 200 VKVWFQNRRTKWRKKEAADNALVKR 224
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEE-EEEDDYRHS 45
V+VWFQNRR KWRK A + +RK++ E S E+ D R S
Sbjct: 113 VQVWFQNRRAKWRK--AERLKDEQRKRENGESSSSLEKLHDSRES 155
>gi|357624436|gb|EHJ75218.1| hypothetical protein KGM_13886 [Danaus plexippus]
Length = 144
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 2 VEVWFQNRRTKWRKK---HAAEMATAKRKQDQVEESEEEEEDDY 42
V++WFQNRRTKW+KK AE+A K++ EE EE +D
Sbjct: 8 VKIWFQNRRTKWKKKDNVTNAEVAEIKQQNKPTEEKIEELKDPL 51
>gi|25027579|ref|NP_737633.1| hypothetical protein CE1023 [Corynebacterium efficiens YS-314]
gi|259507015|ref|ZP_05749915.1| membrane protein [Corynebacterium efficiens YS-314]
gi|23492861|dbj|BAC17833.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165293|gb|EEW49847.1| membrane protein [Corynebacterium efficiens YS-314]
Length = 408
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 12 KWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRR 54
++R KHAAE A R DQ +ESE+ E D R ++R+ R
Sbjct: 362 QFRLKHAAENMAANRASDQEDESEQSENDAVRTEHRGSRRVGR 404
>gi|348557740|ref|XP_003464677.1| PREDICTED: homeobox protein Nkx-6.3-like [Cavia porcellus]
Length = 266
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 17/19 (89%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRRTKWRKK A E
Sbjct: 183 VKVWFQNRRTKWRKKSALE 201
>gi|72044362|ref|XP_782307.1| PREDICTED: uncharacterized protein LOC576952 [Strongylocentrotus
purpuratus]
Length = 528
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+VWFQNRR KWR++ E +T K K
Sbjct: 311 VQVWFQNRRAKWRRQEKMEASTLKLK 336
>gi|395507490|ref|XP_003758057.1| PREDICTED: homeobox protein Nkx-6.3 [Sarcophilus harrisii]
Length = 264
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 17/19 (89%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRRTKWRKK A E
Sbjct: 182 VKVWFQNRRTKWRKKSALE 200
>gi|4760772|dbj|BAA77405.1| PLOX5-Dj [Dugesia japonica]
Length = 288
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEE 36
+++WFQNRR KW+K+H T DQ+E SE+
Sbjct: 231 IKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASEK 265
>gi|2708301|gb|AAB92411.1| sex combs reduced [Acanthokara kaputensis]
Length = 120
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
+++WFQNRR KW+K+H +M+++ Q QV + E +D
Sbjct: 84 IKIWFQNRRMKWKKEH--KMSSSTPPQTQVGQLSPESKD 120
>gi|308511773|ref|XP_003118069.1| CRE-CEH-1 protein [Caenorhabditis remanei]
gi|308238715|gb|EFO82667.1| CRE-CEH-1 protein [Caenorhabditis remanei]
Length = 170
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRREL--AAH 59
V++WFQNRRTKW+K + + A + +E+ + N + L + + A+
Sbjct: 83 VKIWFQNRRTKWKKHNPGQDANTPQTPPSSDETPIQPILPTTSVPNFSSLLLQPIMTPAN 142
Query: 60 CGVQN 64
G+ N
Sbjct: 143 SGMMN 147
>gi|194759514|ref|XP_001961992.1| GF15246 [Drosophila ananassae]
gi|190615689|gb|EDV31213.1| GF15246 [Drosophila ananassae]
Length = 589
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEE-EEEDDYRHS 45
V+VWFQNRR KWRK A + +RK++ E S ++ D R S
Sbjct: 96 VQVWFQNRRAKWRK--AERLKDEQRKRENGESSSSLDKLHDSRES 138
>gi|118786299|ref|XP_555988.2| AGAP005346-PA [Anopheles gambiae str. PEST]
gi|116126253|gb|EAL39802.2| AGAP005346-PA [Anopheles gambiae str. PEST]
Length = 461
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ A++ +
Sbjct: 193 IKIWFQNRRTKWKRKYTADVES 214
>gi|432928367|ref|XP_004081164.1| PREDICTED: motor neuron and pancreas homeobox protein 1-like
[Oryzias latipes]
Length = 317
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 VEVWFQNRRTKW-RKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAK 50
V++WFQNRR KW R K A E A + ++ + +S +E+ D SD AK
Sbjct: 223 VKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGSKSGQEKADGLDQSDYHAK 272
>gi|18203379|sp|Q9PVX0.1|RX2_CHICK RecName: Full=Retinal homeobox protein Rx2; Short=cRax2
gi|6002395|dbj|BAA84749.1| homeobox protein cRax/Rax2/Rx2 [Gallus gallus]
Length = 317
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 166 VQVWFQNRRAKWRRQEKLEVSSMK 189
>gi|344030214|ref|NP_001230653.1| retinal homeobox protein Rx2 [Gallus gallus]
gi|23451258|gb|AAN32718.1|AF420600_1 homeobox transcription factor RAX1 [Gallus gallus]
Length = 317
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 166 VQVWFQNRRAKWRRQEKLEVSSMK 189
>gi|9957756|gb|AAG09467.1| homeobox protein Nkx6.1 [Sus scrofa]
Length = 80
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/16 (93%), Positives = 16/16 (100%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRRTKWRKKH
Sbjct: 65 VKVWFQNRRTKWRKKH 80
>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
musculus]
Length = 342
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|281342207|gb|EFB17791.1| hypothetical protein PANDA_007069 [Ailuropoda melanoleuca]
Length = 64
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 4 VWFQNRRTKWRKKHAAEMATA 24
VWFQNRRTKWRKK A E +++
Sbjct: 1 VWFQNRRTKWRKKSALEPSSS 21
>gi|358332706|dbj|GAA30037.2| homeobox protein SMOX-1 [Clonorchis sinensis]
Length = 733
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAK 50
+++WFQNRR KW+K H DQ+E SE+ H + K
Sbjct: 531 IKIWFQNRRMKWKKDHNIAKLNGPGTLDQLELSEQTSSFGSGHEKKSRK 579
>gi|16758430|ref|NP_446130.1| retinal homeobox protein Rx [Rattus norvegicus]
gi|18203127|sp|Q9JLT7.1|RX_RAT RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein RX [Rattus norvegicus]
gi|12746272|gb|AAK07423.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
gi|149064497|gb|EDM14700.1| retina and anterior neural fold homeobox, isoform CRA_b [Rattus
norvegicus]
Length = 342
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 181 VQVWFQNRRAKWRRQEKLEVSSMK 204
>gi|18858529|ref|NP_571233.1| homeobox protein DBX1-A [Danio rerio]
gi|82248144|sp|Q9PTU1.1|DBX1A_DANRE RecName: Full=Homeobox protein DBX1-A; AltName: Full=Developing
brain homeobox protein 1-A; AltName: Full=Homeobox
protein hlx1
gi|6594621|gb|AAF18561.1|AF030284_1 homeobox protein [Danio rerio]
gi|63101420|gb|AAH95020.1| Developing brain homeobox 1a [Danio rerio]
gi|182888708|gb|AAI64106.1| Dbx1a protein [Danio rerio]
Length = 314
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 16/56 (28%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV----------------EESEEEEEDD 41
V++WFQNRR KWR E+ ++ ++Q + SE+E+EDD
Sbjct: 219 VKIWFQNRRMKWRNSKERELLSSGGCREQTLPTKTNPHPDLSDVGKKSSEDEDEDD 274
>gi|195585125|ref|XP_002082345.1| GD11523 [Drosophila simulans]
gi|194194354|gb|EDX07930.1| GD11523 [Drosophila simulans]
Length = 378
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ ++M T
Sbjct: 130 IKIWFQNRRTKWKRKYTSDMET 151
>gi|324530857|gb|ADY49120.1| Homeobox protein goosecoid, partial [Ascaris suum]
Length = 203
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES----EEEEEDDYRHSDNAAKRLRRELA 57
VEVWF+NRR K RK+ KR D E S +E DY SD+ + RR+L
Sbjct: 141 VEVWFKNRRAKDRKQ--------KRDSDGKESSTVKITASDESDYDVSDDESSSKRRKLC 192
Query: 58 AHCGVQ 63
GV+
Sbjct: 193 VGSGVK 198
>gi|2240024|gb|AAB62324.1| retinal homeobox protein [Mus musculus]
Length = 342
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|118343820|ref|NP_001071730.1| transcription factor protein [Ciona intestinalis]
gi|70569817|dbj|BAE06482.1| transcription factor protein [Ciona intestinalis]
Length = 533
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 12/66 (18%)
Query: 2 VEVWFQNRRTKWRK---------KHAAEMATAKRKQDQVEESEEE---EEDDYRHSDNAA 49
V+ WFQNRR KWR+ K A E T K K D E + E+D+Y D +
Sbjct: 307 VKTWFQNRRAKWRRLKQDGHEEEKDAEEKTTNKSKSDGGFGEENDNTCEKDEYDEPDKES 366
Query: 50 KRLRRE 55
K + E
Sbjct: 367 KSVDNE 372
>gi|317420008|emb|CBN82044.1| Motor neuron and pancreas homeobox protein 1 [Dicentrarchus labrax]
Length = 313
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 VEVWFQNRRTKW-RKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAK 50
V++WFQNRR KW R K A E A + ++ + +S +E+ D SD +K
Sbjct: 219 VKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGTKSGQEKSDGLEQSDYNSK 268
>gi|22749179|ref|NP_689781.1| homeobox protein Nkx-6.3 [Homo sapiens]
gi|16553876|dbj|BAB71610.1| unnamed protein product [Homo sapiens]
gi|119583656|gb|EAW63252.1| hypothetical protein FLJ25169, isoform CRA_b [Homo sapiens]
gi|162317622|gb|AAI56230.1| NK6 homeobox 3 [synthetic construct]
gi|162318070|gb|AAI57003.1| NK6 homeobox 3 [synthetic construct]
gi|306921291|dbj|BAJ17725.1| NK6 homeobox 3 [synthetic construct]
Length = 135
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 4 VWFQNRRTKWRKKHAAEMATA 24
VWFQNRRTKWRKK A E +++
Sbjct: 55 VWFQNRRTKWRKKSALEPSSS 75
>gi|149064496|gb|EDM14699.1| retina and anterior neural fold homeobox, isoform CRA_a [Rattus
norvegicus]
Length = 344
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 183 VQVWFQNRRAKWRRQEKLEVSSMK 206
>gi|110763697|ref|XP_001122544.1| PREDICTED: motor neuron and pancreas homeobox protein 1-like [Apis
mellifera]
Length = 208
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
++ WFQNRRTKW+K+ + + A+R+
Sbjct: 132 IKTWFQNRRTKWKKQLTSRLKIAQRQ 157
>gi|327286903|ref|XP_003228169.1| PREDICTED: homeobox protein Nkx-6.3-like, partial [Anolis
carolinensis]
Length = 76
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 4 VWFQNRRTKWRKKHAAEMATAKRKQ---DQVEESEEEEEDDY 42
VWFQNRRTKWRKK A E +++ + E S +E+D+Y
Sbjct: 1 VWFQNRRTKWRKKSALEPSSSSSPRAGAGPGERSVSDEDDEY 42
>gi|297661929|ref|XP_002809476.1| PREDICTED: H2.0-like homeobox [Pongo abelii]
Length = 496
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEE 37
V+VWFQNRR KWR H+ E A A++ +D+ +E+ E+
Sbjct: 326 VKVWFQNRRMKWR--HSKE-AQAQKDKDKDKEAGEK 358
>gi|400180337|gb|AFP73304.1| Hoxa7beta [Polyodon spathula]
Length = 210
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
+++WFQNRR KW+K+H+ E E ++EEE+
Sbjct: 172 IKIWFQNRRMKWKKEHSDENPNTSTAATATTEVKDEEEE 210
>gi|270001629|gb|EEZ98076.1| hypothetical protein TcasGA2_TC000483 [Tribolium castaneum]
Length = 250
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 2 VEVWFQNRRTKWRKKHA----AEMATAKRKQDQVEESEEEEEDDYRHSDN 47
V+VWFQNRR KWRK H +A K++Q ++E+ + ++ + +D
Sbjct: 201 VKVWFQNRRIKWRKHHLELTHQRLAVLKQQQLLLDEAPDVQDTNSSSTDT 250
>gi|328703933|ref|XP_001942790.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
[Acyrthosiphon pisum]
Length = 408
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED----DYRHS 45
V+VWFQNRR KWRK + KR++ S +E+ D D +HS
Sbjct: 95 VQVWFQNRRAKWRKAERLKEEQRKREEHDRTGSLQEQLDHMAKDMQHS 142
>gi|12746271|gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
Length = 333
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 172 VQVWFQNRRAKWRRQEKLEVSSMK 195
>gi|410916755|ref|XP_003971852.1| PREDICTED: H2.0-like homeobox protein-like [Takifugu rubripes]
Length = 382
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 10/59 (16%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRELAAHC 60
V+VWFQNRR KWR K+ Q ++ +E+E+ D S++ + + L + C
Sbjct: 274 VKVWFQNRRMKWRHS----------KEAQAQKDKEKEQPDTSASESGNREAKEPLDSEC 322
>gi|343469157|gb|AEM43807.1| retina and anterior neural fold homeobox 2b [Xenopus laevis]
Length = 228
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E +T+K
Sbjct: 81 VQVWFQNRRAKWRRQEKLESSTSK 104
>gi|2911356|gb|AAC04332.1| homeobox protein HoxQ8 [Petromyzon marinus]
Length = 272
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 10/48 (20%)
Query: 2 VEVWFQNRRTKWRK----------KHAAEMATAKRKQDQVEESEEEEE 39
V++WFQNRR KW+K K A E + K++Q Q EE+ E E
Sbjct: 218 VKIWFQNRRMKWKKENNKDSFPAPKEAGEEGSTKQQQQQPEEATEPVE 265
>gi|256093000|ref|XP_002582165.1| homeobox protein aristaless-related [Schistosoma mansoni]
gi|353228797|emb|CCD74968.1| homeobox protein aristaless-related [Schistosoma mansoni]
Length = 411
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ +++ T
Sbjct: 108 VQVWFQNRRAKWRKQEGSQLLT 129
>gi|297709609|ref|XP_002831520.1| PREDICTED: homeobox protein ARX [Pongo abelii]
gi|149042310|gb|EDL96017.1| similar to Arx homeoprotein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 200
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 10 VQVWFQNRRAKWRKREKAGAQT 31
>gi|165873661|gb|ABY67955.1| deformed hox protein [Capitella teleta]
Length = 180
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEE 36
+++WFQNRR KW+K+H T R D V SEE
Sbjct: 118 IKIWFQNRRMKWKKEHKLP-NTKTRLTDSVTASEE 151
>gi|91077424|ref|XP_975423.1| PREDICTED: similar to GA15009-PA [Tribolium castaneum]
Length = 234
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 2 VEVWFQNRRTKWRKKHA----AEMATAKRKQDQVEESEEEEEDDYRHSD 46
V+VWFQNRR KWRK H +A K++Q ++E+ + ++ + +D
Sbjct: 185 VKVWFQNRRIKWRKHHLELTHQRLAVLKQQQLLLDEAPDVQDTNSSSTD 233
>gi|332223738|ref|XP_003261026.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Nomascus
leucogenys]
Length = 474
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 284 VQVWFQNRRAKWRKREKAGAQT 305
>gi|363735406|ref|XP_003641551.1| PREDICTED: homeobox protein SAX-1-like [Gallus gallus]
Length = 169
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 16/16 (100%)
Query: 2 VEVWFQNRRTKWRKKH 17
V++WFQNRRTKW+K+H
Sbjct: 79 VKIWFQNRRTKWKKQH 94
>gi|410977842|ref|XP_003995309.1| PREDICTED: retinal homeobox protein Rx [Felis catus]
Length = 390
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
V+VWFQNRR KWR++ E+++ K K++
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMKLKRE 207
>gi|47086641|ref|NP_997866.1| H2.0-like homeobox protein [Danio rerio]
gi|44890671|gb|AAH66687.1| H2.0-like homeo box 1 (Drosophila) [Danio rerio]
Length = 327
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD---QVEESEEEEEDD 41
V+VWFQNRR KWR A+ K K+ E+E++E DD
Sbjct: 223 VKVWFQNRRMKWRHSKEAQAQKDKEKEQPDKSAAETEQKERDD 265
>gi|268574278|ref|XP_002642116.1| C. briggsae CBR-CEH-43 protein [Caenorhabditis briggsae]
Length = 296
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRE 55
V++WFQNRR+K +K ++ T+ R D+ +++EE + + SD+ ++ E
Sbjct: 142 VKIWFQNRRSKQKK---SKGGTSDRASDEDDDTEESKPESSPMSDSMMNQVSSE 192
>gi|328713518|ref|XP_003245101.1| PREDICTED: hypothetical protein LOC100575169 [Acyrthosiphon pisum]
Length = 516
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 362 VKIWFQNRRNKWKRQVAAEIEAA 384
>gi|340726475|ref|XP_003401583.1| PREDICTED: hypothetical protein LOC100646128 [Bombus terrestris]
Length = 567
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 421 VKIWFQNRRNKWKRQLAAELEAA 443
>gi|221379760|ref|NP_732244.3| H6-like-homeobox, isoform C [Drosophila melanogaster]
gi|190359609|sp|Q9VEI9.3|HMX_DROME RecName: Full=Homeobox protein Hmx; Short=DHmx
gi|134085543|gb|ABO52830.1| IP08946p [Drosophila melanogaster]
gi|220903114|gb|AAF55432.3| H6-like-homeobox, isoform C [Drosophila melanogaster]
Length = 592
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 512 VKIWFQNRRNKWKRQLAAEL 531
>gi|311245261|ref|XP_003121760.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Sus scrofa]
Length = 348
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 181 VQVWFQNRRAKWRRQEKLEVSSMK 204
>gi|232583|gb|AAB19293.1| HOX11 homeodomain [Homo sapiens]
Length = 330
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 245 VKTWFQNRRTKWRRQTAEEREAERQQANRILRQLQQE 281
>gi|339252892|ref|XP_003371669.1| ALX homeobox protein 1 [Trichinella spiralis]
gi|316968043|gb|EFV52386.1| ALX homeobox protein 1 [Trichinella spiralis]
Length = 325
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSD 46
V+VWFQNRR KWRKK EM + S + E +D SD
Sbjct: 166 VQVWFQNRRAKWRKK---EMKKTIGRHSNSSVSNQAEGNDVESSD 207
>gi|22859614|emb|CAD45551.1| goosecoid protein [Patella vulgata]
Length = 251
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDD 41
VEVWF+NRR KWRK E A A+R Q +E + E D
Sbjct: 147 VEVWFKNRRAKWRKTKREEEA-ARRAQKGLEPEKNITESD 185
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 440 VQVWFQNRRAKWRKREKAGAQT 461
>gi|242006788|ref|XP_002424227.1| restnal homeobox protein Rx-A, putative [Pediculus humanus
corporis]
gi|212507589|gb|EEB11489.1| restnal homeobox protein Rx-A, putative [Pediculus humanus
corporis]
Length = 229
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 10 VQVWFQNRRAKWRKREKA 27
>gi|194753798|ref|XP_001959192.1| GF12182 [Drosophila ananassae]
gi|190620490|gb|EDV36014.1| GF12182 [Drosophila ananassae]
Length = 380
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 137 IKIWFQNRRTKWKRKYTSDVET 158
>gi|390479624|ref|XP_003735754.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Callithrix jacchus]
Length = 407
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 217 VQVWFQNRRAKWRKREKAGAQT 238
>gi|198474447|ref|XP_002132694.1| GA25749 [Drosophila pseudoobscura pseudoobscura]
gi|198138397|gb|EDY70096.1| GA25749 [Drosophila pseudoobscura pseudoobscura]
Length = 528
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
VEVWFQNRR KWRK A + +RK++ E S
Sbjct: 38 VEVWFQNRRAKWRK--AERLKDEQRKRENGESS 68
>gi|189303837|gb|ACD85822.1| paired-like homeobox Prd2 [Mnemiopsis leidyi]
Length = 308
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 2 VEVWFQNRRTKWRKKH-AAEMATA 24
V+VWFQNRR KWRKK A+M+ A
Sbjct: 95 VQVWFQNRRAKWRKKQREADMSNA 118
>gi|24656319|ref|NP_611491.1| lateral muscles scarcer [Drosophila melanogaster]
gi|7302366|gb|AAF57455.1| lateral muscles scarcer [Drosophila melanogaster]
Length = 411
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 163 IKIWFQNRRTKWKRKYTSDVET 184
>gi|47224352|emb|CAG09198.1| unnamed protein product [Tetraodon nigroviridis]
Length = 342
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 10/59 (16%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRELAAHC 60
V+VWFQNRR KWR K+ Q ++ +E+E+ D S++ + + L + C
Sbjct: 277 VKVWFQNRRMKWRHS----------KEAQAQKDKEKEQPDTCASESGCREAKEPLESEC 325
>gi|391342806|ref|XP_003745706.1| PREDICTED: uncharacterized protein LOC100900460 [Metaseiulus
occidentalis]
Length = 525
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR-----KQDQVEESEEEEEDDYRHSDNAAKRLRREL 56
V+VWFQNRR KWRKK + + Q + EE + R D K+LR++L
Sbjct: 165 VQVWFQNRRAKWRKKENTKKGPGRPAHNAHPQTCSGDPIPPEEIERRERDKKEKKLRKQL 224
>gi|402903228|ref|XP_003914478.1| PREDICTED: retinal homeobox protein Rx [Papio anubis]
Length = 386
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 219 VQVWFQNRRAKWRRQEKLEVSSMK 242
>gi|395828483|ref|XP_003787407.1| PREDICTED: T-cell leukemia homeobox protein 1 [Otolemur garnettii]
Length = 453
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 259 VKTWFQNRRTKWRRQTAEEREAERQQANRI 288
>gi|291402358|ref|XP_002717437.1| PREDICTED: H2.0-like homeobox-like [Oryctolagus cuniculus]
Length = 491
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSD 46
V+VWFQNRR KWR H+ E A+ ++D+ +E+ E+ D +D
Sbjct: 324 VKVWFQNRRMKWR--HSKE---AQAQKDKDKEAGEKPADGASAAD 363
>gi|351712882|gb|EHB15801.1| Homeobox protein NOBOX, partial [Heterocephalus glaber]
Length = 584
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 3 EVWFQNRRTKWRKKHAAEMATAKRKQD 29
+VWFQNRR KWRK E + K KQD
Sbjct: 248 QVWFQNRRAKWRK---VEKLSEKEKQD 271
>gi|195388380|ref|XP_002052858.1| GJ17788 [Drosophila virilis]
gi|194149315|gb|EDW65013.1| GJ17788 [Drosophila virilis]
Length = 378
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVE 32
V+VWFQNRR KWRK+ A ++ Q+E
Sbjct: 49 VQVWFQNRRAKWRKQEKLGTAGDYKEDAQLE 79
>gi|115646382|gb|ABJ17038.1| IP14616p [Drosophila melanogaster]
Length = 397
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 149 IKIWFQNRRTKWKRKYTSDVET 170
>gi|2190464|emb|CAB09537.1| Uncx4.1 [Mus musculus]
Length = 387
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 153 VQVWFQNRRAKWRKK 167
>gi|395845575|ref|XP_003795505.1| PREDICTED: homeobox protein unc-4 homolog [Otolemur garnettii]
Length = 532
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 148 VQVWFQNRRAKWRKK 162
>gi|395514737|ref|XP_003761569.1| PREDICTED: homeobox protein unc-4 homolog, partial [Sarcophilus
harrisii]
Length = 498
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 108 VQVWFQNRRAKWRKK 122
>gi|379697616|dbj|BAL70317.1| reversed polarity [Camponotus japonicus]
Length = 450
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 205 VQVWFQNRRAKWRKK 219
>gi|345801489|ref|XP_548725.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Canis lupus familiaris]
Length = 542
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 153 VQVWFQNRRAKWRKK 167
>gi|332259353|ref|XP_003278751.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Nomascus leucogenys]
Length = 504
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 150 VQVWFQNRRAKWRKK 164
>gi|324512273|gb|ADY45090.1| Homeobox protein goosecoid [Ascaris suum]
Length = 159
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES----EEEEEDDYRHSDNAAKRLRRELA 57
VEVWF+NRR K RK+ KR D E S +E DY SD+ + RR+L
Sbjct: 97 VEVWFKNRRAKDRKQ--------KRDSDGKESSTVKITASDESDYDVSDDESSSKRRKLC 148
Query: 58 AHCGVQN 64
GV+
Sbjct: 149 VGSGVKT 155
>gi|149035039|gb|EDL89759.1| Unc4.1 homeobox (C. elegans) [Rattus norvegicus]
Length = 530
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 153 VQVWFQNRRAKWRKK 167
>gi|148687196|gb|EDL19143.1| Unc4.1 homeobox (C. elegans) [Mus musculus]
Length = 529
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 153 VQVWFQNRRAKWRKK 167
>gi|119607605|gb|EAW87199.1| hCG1642481 [Homo sapiens]
Length = 531
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 149 VQVWFQNRRAKWRKK 163
>gi|122937321|ref|NP_001073930.1| homeobox protein unc-4 homolog [Homo sapiens]
gi|189037644|sp|A6NJT0.1|UNC4_HUMAN RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
Length = 531
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 149 VQVWFQNRRAKWRKK 163
>gi|7305613|ref|NP_038730.1| homeobox protein unc-4 homolog [Mus musculus]
gi|81882119|sp|O08934.2|UNC4_MOUSE RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
gi|2597990|emb|CAA04542.1| transcriptional control factor [Mus musculus]
gi|7963719|gb|AAF71322.1| UNC4 protein [Mus musculus]
gi|30704666|gb|AAH51973.1| Uncx protein [Mus musculus]
Length = 530
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 153 VQVWFQNRRAKWRKK 167
>gi|8393133|ref|NP_058875.1| homeobox protein unc-4 homolog [Rattus norvegicus]
gi|81870610|sp|P97830.1|UNC4_RAT RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1; AltName: Full=Paired-type
homeodomain transcription factor 1
gi|1871471|dbj|BAA13452.1| paired-type homeodomain transcription factor [Rattus norvegicus]
Length = 530
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 153 VQVWFQNRRAKWRKK 167
>gi|443689506|gb|ELT91880.1| hypothetical protein CAPTEDRAFT_149640 [Capitella teleta]
Length = 254
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEE 36
+++WFQNRR KW+K+H T R D V SEE
Sbjct: 192 IKIWFQNRRMKWKKEHKLP-NTKTRLTDSVTASEE 225
>gi|312889|emb|CAA46108.1| unc-4 [Caenorhabditis elegans]
gi|228577|prf||1806384A homeo domain protein
Length = 184
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNA------AKRLRRE 55
V+VWFQNRR KWRK+ +++ K+D E+ E + + S ++ R RR
Sbjct: 96 VQVWFQNRRAKWRKREQNRNGSSEIKKDDGEQMETKALPTFPFSIDSILAVSRVPRGRRP 155
Query: 56 LAAHCGVQ 63
A + VQ
Sbjct: 156 NAKYPRVQ 163
>gi|25092682|ref|NP_739571.1| T-cell leukemia homeobox protein 1 [Danio rerio]
gi|22086275|gb|AAM90622.1|AF398517_1 homeobox protein Hox11 [Danio rerio]
gi|37606033|emb|CAE50907.1| T-cell leukemia, homeobox 1 [Danio rerio]
gi|37606068|emb|CAE49441.1| T-cell leukemia, homeobox 1 [Danio rerio]
gi|190336650|gb|AAI62115.1| T-cell leukemia, homeobox 1 [Danio rerio]
gi|190340177|gb|AAI62486.1| T-cell leukemia, homeobox 1 [Danio rerio]
Length = 301
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 220 VKTWFQNRRTKWRRQTAEEREAERQQANRILMQLQQE 256
>gi|17536615|ref|NP_496138.1| Protein UNC-4 [Caenorhabditis elegans]
gi|1174878|sp|P29506.2|UNC4_CAEEL RecName: Full=Homeobox protein unc-4; AltName: Full=Homeobox
protein ceh-4; AltName: Full=Uncoordinated protein 4
gi|3876444|emb|CAA87368.1| Protein UNC-4 [Caenorhabditis elegans]
Length = 252
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V+VWFQNRR KWRK+ +++ K+D E+ E
Sbjct: 132 VQVWFQNRRAKWRKREQNRNGSSEIKKDDGEQME 165
>gi|348568378|ref|XP_003469975.1| PREDICTED: homeobox protein unc-4 homolog [Cavia porcellus]
Length = 619
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 232 VQVWFQNRRAKWRKK 246
>gi|242014692|ref|XP_002428019.1| hypothetical protein Phum_PHUM359910 [Pediculus humanus corporis]
gi|212512538|gb|EEB15281.1| hypothetical protein Phum_PHUM359910 [Pediculus humanus corporis]
Length = 346
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRRTKW+K+ A A ++Q
Sbjct: 36 VKIWFQNRRTKWKKQDNISNAEAAEHKNQ 64
>gi|109122304|ref|XP_001087324.1| PREDICTED: retinal homeobox protein Rx [Macaca mulatta]
Length = 347
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|242017971|ref|XP_002429457.1| Homeobox protein Hmx, putative [Pediculus humanus corporis]
gi|212514389|gb|EEB16719.1| Homeobox protein Hmx, putative [Pediculus humanus corporis]
Length = 360
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 266 VKIWFQNRRNKWKRQLAAELEAA 288
>gi|42734369|ref|NP_571195.1| homeobox protein Hox-B8a [Danio rerio]
gi|60392412|sp|Q8AWZ0.1|HXB8A_DANRE RecName: Full=Homeobox protein Hox-B8a; Short=Hox-B8
gi|26984634|emb|CAD59111.1| SI:dZ254O17.1 (homeo box protein B8a) [Danio rerio]
gi|31419284|gb|AAH53287.1| Homeo box B8a [Danio rerio]
Length = 245
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAE-MATAKRKQDQVEESEEEEE 39
V++WFQNRR KW+K++ + ++K +Q+Q+E+ + E+E
Sbjct: 189 VKIWFQNRRMKWKKENNKDKFPSSKSEQEQIEKEKREKE 227
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
V+VWFQNRR KWRK A + +RK++ E S
Sbjct: 96 VQVWFQNRRAKWRK--AERLKDEQRKRENGESS 126
>gi|345498467|ref|XP_001601482.2| PREDICTED: hypothetical protein LOC100117163 [Nasonia vitripennis]
Length = 531
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V++WFQNRR KW+++ AAE+ T
Sbjct: 403 VKIWFQNRRNKWKRQLAAELET 424
>gi|291404440|ref|XP_002718555.1| PREDICTED: homeobox protein [Oryctolagus cuniculus]
Length = 269
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
V+ WFQNRR KWR+ + K++Q+ V+ E+ D
Sbjct: 181 VKTWFQNRRAKWRRLKQENPQSGKKEQENVDSPCEQRPD 219
>gi|194881609|ref|XP_001974923.1| GG22042 [Drosophila erecta]
gi|190658110|gb|EDV55323.1| GG22042 [Drosophila erecta]
Length = 381
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 130 IKIWFQNRRTKWKRKYTSDVET 151
>gi|344030242|ref|NP_001230663.1| retinal homeobox protein Rx [Taeniopygia guttata]
Length = 316
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 165 VQVWFQNRRAKWRRQEKLEVTSMK 188
>gi|426386097|ref|XP_004059529.1| PREDICTED: retinal homeobox protein Rx [Gorilla gorilla gorilla]
Length = 346
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|300796715|ref|NP_001178986.1| T-cell leukemia homeobox protein 1 [Bos taurus]
gi|296472778|tpg|DAA14893.1| TPA: T-cell leukemia, homeobox 1-like [Bos taurus]
Length = 335
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 250 VKTWFQNRRTKWRRQTAEEREAERQQANRI 279
>gi|390177112|ref|XP_003736279.1| GA30058 [Drosophila pseudoobscura pseudoobscura]
gi|388858910|gb|EIM52352.1| GA30058 [Drosophila pseudoobscura pseudoobscura]
Length = 591
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 509 VKIWFQNRRNKWKRQLAAEL 528
>gi|148677730|gb|EDL09677.1| retina and anterior neural fold homeobox, isoform CRA_b [Mus
musculus]
Length = 379
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 217 VQVWFQNRRAKWRRQEKLEVSSMK 240
>gi|11276073|ref|NP_068701.1| T-cell leukemia homeobox protein 1 [Mus musculus]
gi|6580606|emb|CAB63267.1| transcription factor [Mus musculus]
gi|17390572|gb|AAH18246.1| T-cell leukemia, homeobox 1 [Mus musculus]
gi|148710003|gb|EDL41949.1| T-cell leukemia, homeobox 1 [Mus musculus]
Length = 333
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 248 VKTWFQNRRTKWRRQTAEEREAERQQANRI 277
>gi|296222754|ref|XP_002757333.1| PREDICTED: retinal homeobox protein Rx [Callithrix jacchus]
Length = 344
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|126116581|ref|NP_038463.2| retinal homeobox protein Rx [Homo sapiens]
gi|296452886|sp|Q9Y2V3.2|RX_HUMAN RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|119583497|gb|EAW63093.1| retina and anterior neural fold homeobox [Homo sapiens]
gi|162317600|gb|AAI56202.1| Retina and anterior neural fold homeobox [synthetic construct]
gi|162318774|gb|AAI57123.1| Retina and anterior neural fold homeobox [synthetic construct]
Length = 346
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|114673345|ref|XP_001142510.1| PREDICTED: retinal homeobox protein Rx isoform 2 [Pan troglodytes]
Length = 346
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|406587|emb|CAA53079.1| NK-type homeobox [Mus musculus]
Length = 458
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 373 VKIWFQNRRNKWKRQLAAELEAA 395
>gi|46048820|ref|NP_990345.1| T-cell leukemia homeobox protein 3 [Gallus gallus]
gi|6016287|sp|O93367.1|TLX3_CHICK RecName: Full=T-cell leukemia homeobox protein 3; AltName:
Full=Homeobox TLX-3; AltName: Full=Homeobox protein
Hox-11L2
gi|3243073|gb|AAC23901.1| homeodomain protein [Gallus gallus]
Length = 297
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 216 VKTWFQNRRTKWRRQ-TAEEREAERQQ 241
>gi|380016351|ref|XP_003692150.1| PREDICTED: homeobox protein engrailed-2b-like [Apis florea]
Length = 331
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
++ WFQNRRTKW+K+ + + A+R+
Sbjct: 254 IKTWFQNRRTKWKKQLTSRLKIAQRQ 279
>gi|390474322|ref|XP_002757665.2| PREDICTED: uncharacterized protein LOC100386232 [Callithrix
jacchus]
Length = 577
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+ WFQNRRTKWR++ A E + +
Sbjct: 494 VKTWFQNRRTKWRRQTAEEREAERHR 519
>gi|73998274|ref|XP_850598.1| PREDICTED: T-cell leukemia homeobox protein 1 isoform 2 [Canis
lupus familiaris]
Length = 337
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 252 VKTWFQNRRTKWRRQTAEEREAERQQANRI 281
>gi|359323208|ref|XP_853978.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC611245
[Canis lupus familiaris]
Length = 1022
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 937 VKIWFQNRRNKWKRQLAAELEAA 959
>gi|82621665|gb|ABB86504.1| NK6-ANTP class homeobox protein, partial [Nematostella vectensis]
gi|110339041|gb|ABG67784.1| NK6, partial [Nematostella vectensis]
Length = 60
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRRTKWRK+H
Sbjct: 45 VKVWFQNRRTKWRKRH 60
>gi|211935|gb|AAA48821.1| Hox 3, partial [Gallus gallus]
Length = 168
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 16/16 (100%)
Query: 2 VEVWFQNRRTKWRKKH 17
V++WFQNRRTKW+K+H
Sbjct: 45 VKIWFQNRRTKWKKQH 60
>gi|53148455|dbj|BAD52255.1| homeo domain transcription factor Not [Halocynthia roretzi]
Length = 433
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 8/44 (18%)
Query: 2 VEVWFQNRRTKWRK-KHAAEM-------ATAKRKQDQVEESEEE 37
V+VWFQNRR KWRK KHA E+ + K K D ++E +E
Sbjct: 382 VKVWFQNRRIKWRKQKHAGELNNKSPYTSVTKSKFDILKEEADE 425
>gi|403306599|ref|XP_003943814.1| PREDICTED: uncharacterized protein LOC101038211 [Saimiri
boliviensis boliviensis]
Length = 811
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 203 VQVWFQNRRAKWRKK 217
>gi|347963918|ref|XP_310605.5| AGAP000488-PA [Anopheles gambiae str. PEST]
gi|333466974|gb|EAA06491.5| AGAP000488-PA [Anopheles gambiae str. PEST]
Length = 598
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 516 VKIWFQNRRNKWKRQLAAEL 535
>gi|327282538|ref|XP_003225999.1| PREDICTED: retinal homeobox protein Rx-B-like [Anolis carolinensis]
Length = 495
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 344 VQVWFQNRRAKWRRQEKLEVTSMK 367
>gi|189241291|ref|XP_974983.2| PREDICTED: similar to t-cell leukemia homeobox protein [Tribolium
castaneum]
Length = 381
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E ++ +++ S + E
Sbjct: 298 VKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAE 334
>gi|344274831|ref|XP_003409218.1| PREDICTED: T-cell leukemia homeobox protein 1-like [Loxodonta
africana]
Length = 330
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 245 VKTWFQNRRTKWRRQTAEEREAERQQANRI 274
>gi|301614688|ref|XP_002936814.1| PREDICTED: t-cell leukemia homeobox protein 1-like isoform 1
[Xenopus (Silurana) tropicalis]
Length = 311
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 226 VKTWFQNRRTKWRRQTAEEREAERQQANRI 255
>gi|410900384|ref|XP_003963676.1| PREDICTED: T-cell leukemia homeobox protein 1-like [Takifugu
rubripes]
Length = 298
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 217 VKTWFQNRRTKWRRQTAEEREAERQQANRILMQLQQE 253
>gi|1170310|sp|P19601.2|SAX1_CHICK RecName: Full=Homeobox protein SAX-1; AltName: Full=CHOX-3
Length = 232
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 12/16 (75%), Positives = 16/16 (100%)
Query: 2 VEVWFQNRRTKWRKKH 17
V++WFQNRRTKW+K+H
Sbjct: 109 VKIWFQNRRTKWKKQH 124
>gi|410957299|ref|XP_003985267.1| PREDICTED: homeobox protein Nkx-6.1 [Felis catus]
Length = 417
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 13/14 (92%), Positives = 14/14 (100%)
Query: 2 VEVWFQNRRTKWRK 15
V+VWFQNRRTKWRK
Sbjct: 261 VKVWFQNRRTKWRK 274
>gi|307171474|gb|EFN63318.1| Aristaless-related homeobox protein [Camponotus floridanus]
Length = 453
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 206 VQVWFQNRRAKWRKK 220
>gi|297712744|ref|XP_002832897.1| PREDICTED: homeobox protein HMX1-like [Pongo abelii]
Length = 377
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 276 VKIWFQNRRNKWKRQLAAELEAA 298
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYR--HSDNAAKRLRREL 56
V+VWFQNRR KWRK + KQD+ S E+D R S+ A R E+
Sbjct: 98 VQVWFQNRRAKWRKAE-------RTKQDRGPSSTSSPENDDRLSSSEGAVGHSREEI 147
>gi|4566741|gb|AAD23438.1|AF115392_1 retinal homeobox protein RX [Homo sapiens]
Length = 346
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|426365940|ref|XP_004050024.1| PREDICTED: T-cell leukemia homeobox protein 1 isoform 1 [Gorilla
gorilla gorilla]
Length = 335
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 250 VKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQE 286
>gi|5031757|ref|NP_005512.1| T-cell leukemia homeobox protein 1 isoform 1 [Homo sapiens]
gi|399982|sp|P31314.1|TLX1_HUMAN RecName: Full=T-cell leukemia homeobox protein 1; AltName:
Full=Homeobox protein Hox-11; AltName:
Full=Proto-oncogene TCL-3; AltName: Full=T-cell
leukemia/lymphoma protein 3
gi|184287|gb|AAA58662.1| homeobox protein [Homo sapiens]
gi|387683|gb|AAA36719.1| homeobox protein [Homo sapiens]
gi|119570163|gb|EAW49778.1| T-cell leukemia homeobox 1 [Homo sapiens]
gi|208967927|dbj|BAG73802.1| T-cell leukemia homeobox 1 [synthetic construct]
Length = 330
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 245 VKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQE 281
>gi|397510296|ref|XP_003825535.1| PREDICTED: T-cell leukemia homeobox protein 1 [Pan paniscus]
Length = 330
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 245 VKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQE 281
>gi|348503438|ref|XP_003439271.1| PREDICTED: motor neuron and pancreas homeobox protein 1-like
[Oreochromis niloticus]
Length = 315
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 2 VEVWFQNRRTKW-RKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAK 50
V++WFQNRR KW R K A E A + ++ + + +E+ D SD +K
Sbjct: 221 VKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGSKGGQEKSDGLEQSDYHSK 270
>gi|296221042|ref|XP_002756582.1| PREDICTED: T-cell leukemia homeobox protein 1 [Callithrix jacchus]
Length = 331
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 246 VKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQE 282
>gi|291404677|ref|XP_002718710.1| PREDICTED: T-cell leukemia homeobox 1 [Oryctolagus cuniculus]
Length = 335
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 250 VKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQE 286
>gi|157821251|ref|NP_001102636.1| T-cell leukemia homeobox protein 1 [Rattus norvegicus]
gi|149040265|gb|EDL94303.1| similar to transcription factor (predicted) [Rattus norvegicus]
Length = 333
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 248 VKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQE 284
>gi|109090313|ref|XP_001109904.1| PREDICTED: t-cell leukemia homeobox protein 1-like isoform 1
[Macaca mulatta]
Length = 336
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 251 VKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQE 287
>gi|3392912|emb|CAA08834.1| HOX11 protein [Homo sapiens]
Length = 330
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 245 VKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQE 281
>gi|91090023|ref|XP_967446.1| PREDICTED: similar to H6 family homeobox 3 [Tribolium castaneum]
gi|270013529|gb|EFA09977.1| hypothetical protein TcasGA2_TC012136 [Tribolium castaneum]
Length = 432
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 318 VKIWFQNRRNKWKRQLAAELEAA 340
>gi|21064451|gb|AAM29455.1| RE33150p [Drosophila melanogaster]
Length = 378
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 130 IKIWFQNRRTKWKRKYTSDVET 151
>gi|195486835|ref|XP_002091670.1| GE12123 [Drosophila yakuba]
gi|194177771|gb|EDW91382.1| GE12123 [Drosophila yakuba]
Length = 380
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 130 IKIWFQNRRTKWKRKYTSDVET 151
>gi|195150297|ref|XP_002016091.1| GL11409 [Drosophila persimilis]
gi|198457088|ref|XP_001360547.2| GA12277 [Drosophila pseudoobscura pseudoobscura]
gi|194109938|gb|EDW31981.1| GL11409 [Drosophila persimilis]
gi|198135854|gb|EAL25122.2| GA12277 [Drosophila pseudoobscura pseudoobscura]
Length = 383
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 135 IKIWFQNRRTKWKRKYTSDVET 156
>gi|149047394|gb|EDM00064.1| H6 homeo box 1 (predicted), isoform CRA_b [Rattus norvegicus]
Length = 333
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 236 VKIWFQNRRNKWKRQLAAELEAA 258
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+VWFQNRR KWRK + KR+
Sbjct: 220 VQVWFQNRRAKWRKSERLKEEQRKRE 245
>gi|68144510|gb|AAY86176.1| goosecoid [Heliocidaris tuberculata]
Length = 348
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
VEVWF+NRR KWRK+ + AKR + + + D
Sbjct: 194 VEVWFKNRRAKWRKQKREQQEAAKRASEAYKTEHGSKPD 232
>gi|410909247|ref|XP_003968102.1| PREDICTED: motor neuron and pancreas homeobox protein 1-like
[Takifugu rubripes]
Length = 314
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 2 VEVWFQNRRTKW-RKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAK 50
V++WFQNRR KW R K A E A + ++ + + +E+ D SD +K
Sbjct: 220 VKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGSKGGQEKADGLEQSDYNSK 269
>gi|291391792|ref|XP_002712253.1| PREDICTED: homeobox D8-like [Oryctolagus cuniculus]
Length = 491
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEE----EED 40
V++WFQNRR KW+K++ + R++ ++ E++EE EED
Sbjct: 442 VKIWFQNRRMKWKKENNKDRFPISRQEAKLGETKEEAGELEED 484
>gi|195349077|ref|XP_002041073.1| GM15242 [Drosophila sechellia]
gi|194122678|gb|EDW44721.1| GM15242 [Drosophila sechellia]
Length = 280
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V++WFQNRR KW+++ AAE+ A + ++ E E
Sbjct: 180 VKIWFQNRRNKWKRQLAAELEAANLTEADMDSDSEHE 216
>gi|269785141|ref|NP_001161526.1| diencephalon/mesencephalon homeobox [Saccoglossus kowalevskii]
gi|268054033|gb|ACY92503.1| Dmbx [Saccoglossus kowalevskii]
Length = 375
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAA 49
V+VWF+NRR K+RK+ + K+++ Q +ESE++E+D + +D A
Sbjct: 108 VQVWFKNRRAKFRKQ---QRLKTKQEKPQTDESEKQEQDCEKMADEGA 152
>gi|47551097|ref|NP_999727.1| homeodomain protein Not [Strongylocentrotus purpuratus]
gi|4416345|gb|AAD20328.1| homeodomain protein Not [Strongylocentrotus purpuratus]
Length = 516
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 2 VEVWFQNRRTKWRK----KHAAEMATAKRKQDQVEESE-EEEEDDYRHSDN 47
V+VWFQNRR KWRK K +A + Q+ ES+ EEDD + +D+
Sbjct: 331 VKVWFQNRRIKWRKQNFEKQQVHLAHIRAVQESRHESDPSSEEDDEQVNDH 381
>gi|432941417|ref|XP_004082841.1| PREDICTED: homeobox protein not2 [Oryzias latipes]
Length = 251
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 2 VEVWFQNRRTKWRKKHA----AEMA----TAKRKQDQVEESEEEEEDDYRHSD 46
V+VWFQNRR KWRK+ A++A A K E E +++ D+ SD
Sbjct: 187 VKVWFQNRRIKWRKQSLEQQQAKLAKLGLAAPLKSPGSEGHEGDDDQDFSESD 239
>gi|328720968|ref|XP_003247173.1| PREDICTED: hypothetical protein LOC100568964 [Acyrthosiphon pisum]
Length = 280
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 15/16 (93%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK+H
Sbjct: 225 VKVWFQNRRIKWRKQH 240
>gi|190337675|gb|AAI63788.1| Rx3 protein [Danio rerio]
gi|190338758|gb|AAI63791.1| Rx3 protein [Danio rerio]
Length = 292
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KWR++ E+++ K ++ +
Sbjct: 150 VQVWFQNRRAKWRRQEKLEVSSIKLQESSM 179
>gi|18859339|ref|NP_571302.1| retinal homeobox protein Rx3 [Danio rerio]
gi|18202036|sp|O42358.1|RX3_DANRE RecName: Full=Retinal homeobox protein Rx3
gi|2240030|gb|AAB62327.1| retinal homeobox protein [Danio rerio]
Length = 292
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KWR++ E+++ K ++ +
Sbjct: 150 VQVWFQNRRAKWRRQEKLEVSSIKLQESSM 179
>gi|348578607|ref|XP_003475074.1| PREDICTED: LOW QUALITY PROTEIN: T-cell leukemia homeobox protein
1-like [Cavia porcellus]
Length = 335
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 250 VKTWFQNRRTKWRRQTAEEREAERQQANRI 279
>gi|322366546|gb|ADW95347.1| Unc4 [Paracentrotus lividus]
Length = 171
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/15 (93%), Positives = 15/15 (100%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRRTKWRKK
Sbjct: 157 VQVWFQNRRTKWRKK 171
>gi|348538511|ref|XP_003456734.1| PREDICTED: T-cell leukemia homeobox protein 1-like [Oreochromis
niloticus]
Length = 299
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 218 VKTWFQNRRTKWRRQTAEEREAERQQANRILMQLQQE 254
>gi|442619623|ref|NP_001262674.1| H6-like-homeobox, isoform D [Drosophila melanogaster]
gi|440217544|gb|AGB96054.1| H6-like-homeobox, isoform D [Drosophila melanogaster]
Length = 718
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 512 VKIWFQNRRNKWKRQLAAEL 531
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 335 VQVWFQNRRAKWRKREKAGAQT 356
>gi|6754218|ref|NP_034575.1| homeobox protein HMX1 [Mus musculus]
gi|81861331|sp|O70218.1|HMX1_MOUSE RecName: Full=Homeobox protein HMX1; AltName: Full=Homeobox protein
H6
gi|2978515|gb|AAC24193.1| homeobox containing nuclear transcriptional factor Hmx1 [Mus
musculus]
gi|3253161|gb|AAC24324.1| homeobox containing nuclear transcriptional factor Hmx1 [Mus
musculus]
gi|148705536|gb|EDL37483.1| H6 homeobox 1 [Mus musculus]
gi|182888407|gb|AAI60207.1| H6 homeo box 1 [synthetic construct]
Length = 332
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 235 VKIWFQNRRNKWKRQLAAELEAA 257
>gi|195382966|ref|XP_002050199.1| GJ22013 [Drosophila virilis]
gi|194144996|gb|EDW61392.1| GJ22013 [Drosophila virilis]
Length = 373
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 127 IKIWFQNRRTKWKRKYTSDVET 148
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+VWFQNRR KWRK + KR+
Sbjct: 233 VQVWFQNRRAKWRKSERLKEEQRKRE 258
>gi|307209263|gb|EFN86359.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 424
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 201 VQVWFQNRRAKWRKK 215
>gi|195336136|ref|XP_002034703.1| GM22025 [Drosophila sechellia]
gi|194126673|gb|EDW48716.1| GM22025 [Drosophila sechellia]
Length = 378
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 130 IKIWFQNRRTKWKRKYTSDVET 151
>gi|156553086|ref|XP_001599133.1| PREDICTED: hypothetical protein LOC100113833 [Nasonia vitripennis]
Length = 553
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRL 52
V++WFQNRR KWR E+ + ++Q ++ D +D +RL
Sbjct: 474 VKIWFQNRRMKWRNSKERELLASGGSREQTLPNKNNPNPDLSDADGDRQRL 524
>gi|391329564|ref|XP_003739241.1| PREDICTED: homeobox protein HMX3-like [Metaseiulus occidentalis]
Length = 424
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 267 VKIWFQNRRNKWKRQLAAEI 286
>gi|441600293|ref|XP_004087599.1| PREDICTED: T-cell leukemia homeobox protein 1 [Nomascus leucogenys]
Length = 328
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 243 VKTWFQNRRTKWRRQTAEEREAERQQANRI 272
>gi|301614690|ref|XP_002936815.1| PREDICTED: t-cell leukemia homeobox protein 1-like isoform 2
[Xenopus (Silurana) tropicalis]
Length = 299
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 214 VKTWFQNRRTKWRRQTAEEREAERQQANRI 243
>gi|241576088|ref|XP_002403318.1| homeobox domain, putative [Ixodes scapularis]
gi|215502193|gb|EEC11687.1| homeobox domain, putative [Ixodes scapularis]
Length = 145
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVE 32
VEVWF+NRR KWRK+ E +R QDQV+
Sbjct: 69 VEVWFKNRRAKWRKQQREEQERQRRLQDQVQ 99
>gi|157128276|ref|XP_001661378.1| hypothetical protein AaeL_AAEL002355 [Aedes aegypti]
gi|108882265|gb|EAT46490.1| AAEL002355-PA [Aedes aegypti]
Length = 300
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
+++WFQNRRTKW++K+ +++
Sbjct: 66 IKIWFQNRRTKWKRKYTSDV 85
>gi|449281838|gb|EMC88811.1| Retinal homeobox protein Rx2, partial [Columba livia]
Length = 233
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 82 VQVWFQNRRAKWRRQEKLEVTSMK 105
>gi|432901808|ref|XP_004076957.1| PREDICTED: T-cell leukemia homeobox protein 1-like [Oryzias
latipes]
Length = 291
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 210 VKTWFQNRRTKWRRQTAEEREAERQQANRILMQLQQE 246
>gi|395830733|ref|XP_003788473.1| PREDICTED: retinal homeobox protein Rx [Otolemur garnettii]
Length = 344
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|213514446|ref|NP_001133033.1| homeobox protein HoxA7aa [Salmo salar]
gi|157816041|gb|ABV82039.1| homeobox protein HoxA7aa [Salmo salar]
gi|158702220|gb|ABW77441.1| homeobox protein HoxA7aa [Salmo salar]
Length = 247
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 26/39 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
+++WFQNRR KW+K H E +++ + + +E+++ D
Sbjct: 168 IKIWFQNRRMKWKKDHKDESSSSTPGANGEDVNEDDDSD 206
>gi|157821167|ref|NP_001101833.1| homeobox protein HMX1 [Rattus norvegicus]
gi|149047393|gb|EDM00063.1| H6 homeo box 1 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 196
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 99 VKIWFQNRRNKWKRQLAAELEAA 121
>gi|147900079|ref|NP_001079216.1| T-cell leukemia homeobox 1 [Xenopus laevis]
gi|10185814|gb|AAG14453.1|AF283694_1 homeobox protein XHox11 [Xenopus laevis]
Length = 312
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 227 VKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQE 263
>gi|395853388|ref|XP_003799194.1| PREDICTED: homeobox protein HMX1 [Otolemur garnettii]
Length = 348
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 247 VKIWFQNRRNKWKRQLAAELEAA 269
>gi|395501879|ref|XP_003755317.1| PREDICTED: LOW QUALITY PROTEIN: hematopoietically-expressed
homeobox protein HHEX [Sarcophilus harrisii]
Length = 451
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 10/45 (22%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSD 46
V+ WFQNRR KWR + KQ+ + +EE E+ RH D
Sbjct: 361 VKTWFQNRRAKWR----------RLKQENPQNKKEELENADRHCD 395
>gi|358420016|ref|XP_607652.5| PREDICTED: homeobox protein ARX [Bos taurus]
Length = 411
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 221 VQVWFQNRRAKWRKREKAGAQT 242
>gi|340369432|ref|XP_003383252.1| PREDICTED: hypothetical protein LOC100635424 [Amphimedon
queenslandica]
Length = 337
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWRKK +
Sbjct: 126 VQVWFQNRRAKWRKKEKQQ 144
>gi|224586736|dbj|BAH24205.1| Noto [Oryzias latipes]
Length = 224
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 2 VEVWFQNRRTKWRKKHA----AEMA----TAKRKQDQVEESEEEEEDDYRHSD 46
V+VWFQNRR KWRK+ A++A A K E E +++ D+ SD
Sbjct: 162 VKVWFQNRRIKWRKQSLEQQQAKLAKLGLAAPLKSPGSEGHEGDDDQDFSESD 214
>gi|260831452|ref|XP_002610673.1| hypothetical protein BRAFLDRAFT_116854 [Branchiostoma floridae]
gi|229296040|gb|EEN66683.1| hypothetical protein BRAFLDRAFT_116854 [Branchiostoma floridae]
Length = 243
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE-----EEEEDDYR 43
VEVWF+NRR KWRK+ + D +S+ ++EDD R
Sbjct: 146 VEVWFKNRRAKWRKQQREVTERTTKAADDACDSDIDVTSLDDEDDVR 192
>gi|9739171|gb|AAF97935.1|AF281674_1 homeodomain protein goosecoid [Branchiostoma floridae]
Length = 243
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE-----EEEEDDYR 43
VEVWF+NRR KWRK+ + D +S+ ++EDD R
Sbjct: 146 VEVWFKNRRAKWRKQQREVTERTTKAADDACDSDIDVTSLDDEDDVR 192
>gi|327261022|ref|XP_003215331.1| PREDICTED: t-cell leukemia homeobox protein 3-like [Anolis
carolinensis]
Length = 306
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 225 VKTWFQNRRTKWRRQ-TAEEREAERQQ 250
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 372 VQVWFQNRRAKWRKREKAGAQT 393
>gi|402862720|ref|XP_003895694.1| PREDICTED: homeobox protein unc-4 homolog [Papio anubis]
Length = 490
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 149 VQVWFQNRRAKWRKK 163
>gi|311250806|ref|XP_003124306.1| PREDICTED: homeobox protein unc-4 homolog [Sus scrofa]
Length = 398
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 154 VQVWFQNRRAKWRKK 168
>gi|149639200|ref|XP_001516357.1| PREDICTED: retinal homeobox protein Rx1-like [Ornithorhynchus
anatinus]
Length = 231
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E ++ K
Sbjct: 82 VQVWFQNRRAKWRRQEKMEASSTK 105
>gi|429510508|gb|AFZ94992.1| transcription factor Hox7 [Petromyzon marinus]
Length = 227
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 24/31 (77%), Gaps = 3/31 (9%)
Query: 2 VEVWFQNRRTKWRKKH---AAEMATAKRKQD 29
+++WFQNRR KW+K+H AAE + ++ K+D
Sbjct: 197 IKIWFQNRRMKWKKEHQNPAAEASASEEKKD 227
>gi|195430460|ref|XP_002063272.1| GK21480 [Drosophila willistoni]
gi|194159357|gb|EDW74258.1| GK21480 [Drosophila willistoni]
Length = 384
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 161 IKIWFQNRRTKWKRKYTSDVET 182
>gi|444515967|gb|ELV11025.1| Homeobox protein unc-4 like protein [Tupaia chinensis]
Length = 302
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 61 VQVWFQNRRAKWRKK 75
>gi|344296031|ref|XP_003419713.1| PREDICTED: homeobox protein HMX3-like [Loxodonta africana]
Length = 282
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 198 VKIWFQNRRNKWKRQLAAELEAA 220
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+VWFQNRR KWRK + KR+
Sbjct: 283 VQVWFQNRRAKWRKSERLKEEQRKRE 308
>gi|344251521|gb|EGW07625.1| Homeobox protein ARX [Cricetulus griseus]
Length = 279
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 89 VQVWFQNRRAKWRKREKAGAQT 110
>gi|332018355|gb|EGI58960.1| Retinal homeobox protein Rax [Acromyrmex echinatior]
Length = 449
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 209 VQVWFQNRRAKWRKK 223
>gi|307184040|gb|EFN70590.1| hypothetical protein EAG_03181 [Camponotus floridanus]
Length = 321
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+VWFQNRR KWRK + KR+
Sbjct: 10 VQVWFQNRRAKWRKSERLKEEQRKRE 35
>gi|395749930|ref|XP_003779033.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pongo
abelii]
Length = 346
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|322795955|gb|EFZ18581.1| hypothetical protein SINV_05030 [Solenopsis invicta]
Length = 458
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 212 VQVWFQNRRAKWRKK 226
>gi|322790723|gb|EFZ15467.1| hypothetical protein SINV_04888 [Solenopsis invicta]
Length = 410
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 255 VKIWFQNRRNKWKRQLAAELEAA 277
>gi|3581946|emb|CAA64696.1| homeodomain protein [Girardia tigrina]
Length = 259
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVE 32
+++WFQNRR KW+K+H T DQ+E
Sbjct: 217 IKIWFQNRRMKWKKEHNIAKLTGPGSCDQLE 247
>gi|296470543|tpg|DAA12658.1| TPA: Aristaless-related homeobox 2-like [Bos taurus]
Length = 364
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 174 VQVWFQNRRAKWRKREKAGAQT 195
>gi|242009008|ref|XP_002425285.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212509050|gb|EEB12547.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 513
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
V+VWFQNRR KWRK A + +RK+D
Sbjct: 94 VQVWFQNRRAKWRK--AERLKEEQRKRD 119
>gi|61161996|dbj|BAD91047.1| homeodomain protein HpNot [Hemicentrotus pulcherrimus]
Length = 490
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRK----KHAAEMATAKRKQDQVEESEEEEEDD 41
V+VWFQNRR KWRK K +A + Q+ ES+ E+D
Sbjct: 305 VKVWFQNRRIKWRKQNFEKQQVHLAHIRSVQESRHESDPSSEED 348
>gi|410903484|ref|XP_003965223.1| PREDICTED: retinal homeobox protein Rx3-like [Takifugu rubripes]
Length = 301
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 153 VQVWFQNRRAKWRRQEKLEVSSIK 176
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+VWFQNRR KWRK + KR+
Sbjct: 96 VQVWFQNRRAKWRKSERLKEEQRKRE 121
>gi|345327993|ref|XP_001515131.2| PREDICTED: homeobox protein Hox-D8-like, partial [Ornithorhynchus
anatinus]
Length = 267
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
V++WFQNRR KW+K++ + A R++ + E+++E +D
Sbjct: 218 VKIWFQNRRMKWKKENNKDKFPASRQEGKEGEAKKEAQD 256
>gi|359079339|ref|XP_003587831.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 181 VQVWFQNRRAKWRRQEKLEVSSMK 204
>gi|358418744|ref|XP_003584036.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 181 VQVWFQNRRAKWRRQEKLEVSSMK 204
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 372 VQVWFQNRRAKWRKREKAGAQT 393
>gi|1170433|sp|P43345.1|TLX1_MOUSE RecName: Full=T-cell leukemia homeobox protein 1; AltName:
Full=Homeobox TLX-1; AltName: Full=Homeobox protein
Hox-11
gi|2143478|pir||I57032 gene Tlx-1 protein - mouse
gi|546380|gb|AAB30542.1| homeobox gene HOX11 homolog [Mus sp.]
Length = 332
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E + +++
Sbjct: 247 VKTWFQNRRTKWRRQTAEEREAESEQANRI 276
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+VWFQNRR KWRK + KR+
Sbjct: 281 VQVWFQNRRAKWRKSERLKEEQRKRE 306
>gi|297687228|ref|XP_002821122.1| PREDICTED: T-cell leukemia homeobox protein 1 [Pongo abelii]
Length = 336
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E + + +++
Sbjct: 251 VKTWFQNRRTKWRRQTAEEREAERHQANRI 280
>gi|284005034|ref|NP_001164681.1| paired-like homeobox 2 [Saccoglossus kowalevskii]
gi|283464071|gb|ADB22619.1| paired-like homeobox 2 [Saccoglossus kowalevskii]
Length = 264
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR---KQDQVEESEEE 37
V+VWFQNRR K+RK A A K+ K + V SEE+
Sbjct: 153 VQVWFQNRRAKFRKGDKATQAKPKKKAIKSNNVVNSEEK 191
>gi|194913445|ref|XP_001982698.1| GG16402 [Drosophila erecta]
gi|190647914|gb|EDV45217.1| GG16402 [Drosophila erecta]
Length = 543
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
++VWF NRR KWR++ +M T +R D V+ S
Sbjct: 309 IQVWFSNRRAKWRREE--KMRTQRRSADTVDGS 339
>gi|442614511|ref|NP_001259080.1| twin of eyeless, isoform C [Drosophila melanogaster]
gi|440218170|gb|AGB96570.1| twin of eyeless, isoform C [Drosophila melanogaster]
Length = 526
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 3 EVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
EVWF NRR KWR++ +M T +R D V+ S
Sbjct: 306 EVWFSNRRAKWRREE--KMRTQRRSADTVDGS 335
>gi|390347693|ref|XP_001177706.2| PREDICTED: uncharacterized protein LOC752256 [Strongylocentrotus
purpuratus]
Length = 436
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
++ WFQNRRTKW+K+ A + A R+
Sbjct: 321 IKTWFQNRRTKWKKQMMARLKMAHRQ 346
>gi|374277734|gb|AEZ03833.1| homeobrain [Terebratalia transversa]
Length = 323
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 183 VQVWFQNRRAKWRKREKA 200
>gi|47550979|ref|NP_999663.1| goosecoid transcription factor [Strongylocentrotus purpuratus]
gi|11127990|gb|AAG31170.1|AF315231_1 goosecoid transcription factor Gsc [Strongylocentrotus purpuratus]
Length = 320
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
VEVWF+NRR KWRK+ + AKR +
Sbjct: 189 VEVWFKNRRAKWRKQKREQQEAAKRASE 216
>gi|301624284|ref|XP_002941436.1| PREDICTED: retinal homeobox protein Rx1-like [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E +++K
Sbjct: 80 VQVWFQNRRAKWRRQEKLETSSSK 103
>gi|426355750|ref|XP_004045271.1| PREDICTED: homeobox protein Hox-A7 [Gorilla gorilla gorilla]
Length = 230
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E TA
Sbjct: 174 IKIWFQNRRMKWKKEHKDEGPTA 196
>gi|17551224|ref|NP_508796.1| Protein CEH-1 [Caenorhabditis elegans]
gi|1708228|sp|P53547.1|HM01_CAEEL RecName: Full=Homeobox protein ceh-1
gi|373219355|emb|CCD67466.1| Protein CEH-1 [Caenorhabditis elegans]
Length = 132
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V++WFQNRRTKW+K + + A + +E++ +
Sbjct: 45 VKIWFQNRRTKWKKHNPGQDANTPQTPPSSDETQIQP 81
>gi|363739532|ref|XP_414766.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Gallus gallus]
Length = 445
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 141 VQVWFQNRRAKWRKK 155
>gi|158293967|ref|XP_315326.4| AGAP005311-PA [Anopheles gambiae str. PEST]
gi|157015346|gb|EAA11051.4| AGAP005311-PA [Anopheles gambiae str. PEST]
Length = 349
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 160 VQVWFQNRRAKWRKREKA 177
>gi|432862630|ref|XP_004069950.1| PREDICTED: homeobox protein DBX2-like [Oryzias latipes]
Length = 240
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRELA 57
V++WFQNRR KWR E+ T + D++ +ED+ ++ + +L+ L
Sbjct: 178 VKIWFQNRRMKWRNCKEKELHTNRSPMDELMSRGLTQEDEELSHNHTSAKLQSSLP 233
>gi|449277036|gb|EMC85343.1| Homeobox protein Hox-B7 [Columba livia]
Length = 217
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
+++WFQNRR KW+K++ + + ++ Q E +EEE
Sbjct: 181 IKIWFQNRRMKWKKENKTACSGSSSQEKQDGEDDEEE 217
>gi|194041627|ref|XP_001927147.1| PREDICTED: NK1 transcription factor-related protein 2-like [Sus
scrofa]
Length = 320
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V++WFQNRRTKW+K++ TA+
Sbjct: 208 VKIWFQNRRTKWKKQNPGAEGTAQ 231
>gi|156554252|ref|XP_001601499.1| PREDICTED: hypothetical protein LOC100117188 [Nasonia vitripennis]
Length = 471
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 18/28 (64%), Gaps = 5/28 (17%)
Query: 2 VEVWFQNRRTKWRK-----KHAAEMATA 24
V+VWFQNRR KWRK K A MAT
Sbjct: 229 VQVWFQNRRAKWRKREPPRKTAGYMATG 256
>gi|449673715|ref|XP_002156720.2| PREDICTED: uncharacterized protein LOC100198428 [Hydra
magnipapillata]
Length = 609
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHS-DNAAK 50
++VWFQNRR KWRK + QVE + E +H NAAK
Sbjct: 184 IQVWFQNRRAKWRKAERNLLINNNIDNTQVESKSKTENLSLKHKIPNAAK 233
>gi|307170800|gb|EFN62916.1| Homeobox protein ARX [Camponotus floridanus]
Length = 382
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRKK A
Sbjct: 112 VQVWFQNRRAKWRKKEKA 129
>gi|260816862|ref|XP_002603306.1| homeobox protein-like protein [Branchiostoma floridae]
gi|229288625|gb|EEN59317.1| homeobox protein-like protein [Branchiostoma floridae]
Length = 318
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 5/30 (16%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KWRK+ T +R DQ+
Sbjct: 141 VQVWFQNRRAKWRKRE-----TPRRSADQL 165
>gi|194881725|ref|XP_001974972.1| GG22067 [Drosophila erecta]
gi|190658159|gb|EDV55372.1| GG22067 [Drosophila erecta]
Length = 898
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWR++ +E
Sbjct: 597 VQVWFQNRRAKWRRQEKSE 615
>gi|405955033|gb|EKC22300.1| Homeobox protein DBX1-A [Crassostrea gigas]
Length = 341
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 8/43 (18%)
Query: 2 VEVWFQNRRTKWRKKHAAEM--------ATAKRKQDQVEESEE 36
V++WFQNRR KWR E+ AT K +Q E+ +E
Sbjct: 232 VKIWFQNRRMKWRNSKERELLSGGGSRDATLTSKSNQCEDEDE 274
>gi|148229848|ref|NP_001079226.1| homeobox protein HMX3 [Xenopus laevis]
gi|82243609|sp|Q8JJ64.1|HMX3_XENLA RecName: Full=Homeobox protein HMX3; AltName: Full=Homeobox protein
H6 family member 3; AltName: Full=Homeobox protein
Nkx-5.1; Short=X-nkx-5.1
gi|20385194|gb|AAM21210.1|AF368235_1 Nkx-5.1 [Xenopus laevis]
gi|213624988|gb|AAI69574.1| Nkx-5.1 homeodomain protein [Xenopus laevis]
gi|213627760|gb|AAI69576.1| Nkx-5.1 homeodomain protein [Xenopus laevis]
Length = 306
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 222 VKIWFQNRRNKWKRQLAAELEAA 244
>gi|4883932|gb|AAD31712.1|AF134350_1 transcription factor Toy [Drosophila melanogaster]
Length = 543
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
++VWF NRR KWR++ +M T +R D V+ S
Sbjct: 309 IQVWFSNRRAKWRREE--KMRTQRRSADTVDGS 339
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 274 VQVWFQNRRAKWRKREKAGAQT 295
>gi|359082023|ref|XP_002700381.2| PREDICTED: homeobox protein ARX [Bos taurus]
Length = 411
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 221 VQVWFQNRRAKWRKREKAGAQT 242
>gi|224042664|ref|XP_002195184.1| PREDICTED: homeobox protein ARX [Taeniopygia guttata]
Length = 509
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 319 VQVWFQNRRAKWRKREKAGAQT 340
>gi|5733509|gb|AAD49613.1|AF153046_1 homeodomain protein HB9 [Mus musculus]
Length = 404
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV------------EESEEEEEDDYRHSDNAA 49
V++WFQNRR KW++ A+ A+ + Q E++EEE D A+
Sbjct: 285 VKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGTGKGGSEEKTEEELMGPPVSGDKAS 344
Query: 50 KRLRREL 56
R R+L
Sbjct: 345 GRRLRDL 351
>gi|148237828|ref|NP_001081687.1| retinal homeobox protein Rx-A [Xenopus laevis]
gi|292495033|sp|O42201.2|RXA_XENLA RecName: Full=Retinal homeobox protein Rx-A; Short=Rx1A;
Short=Xrx1; AltName: Full=Retina and anterior neural
fold homeobox protein A
gi|2232059|gb|AAB62322.1| retinal homeobox 1A [Xenopus laevis]
gi|213625316|gb|AAI70331.1| Retinal homeobox 1A [Xenopus laevis]
gi|213626887|gb|AAI70333.1| Retinal homeobox 1A [Xenopus laevis]
Length = 322
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 174 VQVWFQNRRAKWRRQEKLEVTSMK 197
>gi|2661791|emb|CAA74865.1| Hoxb8 protein [Danio rerio]
Length = 84
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 2 VEVWFQNRRTKWRKKHAA-EMATAKRKQDQVEESEEEEE 39
V++WFQNRR KW+K++ + ++K +Q+Q+E+ + E+E
Sbjct: 28 VKIWFQNRRMKWKKENNTHKFPSSKSEQEQIEKEKREKE 66
>gi|354496948|ref|XP_003510585.1| PREDICTED: hypothetical protein LOC100767995 [Cricetulus griseus]
Length = 455
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 370 VKIWFQNRRNKWKRQLAAELEAA 392
>gi|260816834|ref|XP_002603292.1| homeobox protein-like protein [Branchiostoma floridae]
gi|229288611|gb|EEN59303.1| homeobox protein-like protein [Branchiostoma floridae]
Length = 317
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 5/30 (16%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KWRK+ T +R DQ+
Sbjct: 140 VQVWFQNRRAKWRKRE-----TPRRSADQL 164
>gi|195355670|ref|XP_002044313.1| GM13021 [Drosophila sechellia]
gi|194130600|gb|EDW52643.1| GM13021 [Drosophila sechellia]
Length = 543
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
++VWF NRR KWR++ +M T +R D V+ S
Sbjct: 309 IQVWFSNRRAKWRREE--KMRTQRRSADTVDGS 339
>gi|45549245|ref|NP_524638.3| twin of eyeless, isoform A [Drosophila melanogaster]
gi|15291285|gb|AAK92911.1| GH14454p [Drosophila melanogaster]
gi|45444822|gb|AAF59395.4| twin of eyeless, isoform A [Drosophila melanogaster]
gi|220942324|gb|ACL83705.1| toy-PA [synthetic construct]
gi|220952546|gb|ACL88816.1| toy-PA [synthetic construct]
Length = 543
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
++VWF NRR KWR++ +M T +R D V+ S
Sbjct: 309 IQVWFSNRRAKWRREE--KMRTQRRSADTVDGS 339
>gi|400294533|gb|AFP81698.1| ventral anterior homeobox protein [Convolutriloba longifissura]
Length = 439
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRRTK++++ E T K D +
Sbjct: 278 VKVWFQNRRTKYKREKQREQETKKNDMDTL 307
>gi|170035788|ref|XP_001845749.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878186|gb|EDS41569.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 438
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
+++WFQNRRTKW++K+ +++
Sbjct: 196 IKIWFQNRRTKWKRKYTSDV 215
>gi|6513841|gb|AAD01939.2| homeobox protein HOXA7 [Homo sapiens]
Length = 230
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+K+H E TA
Sbjct: 174 VKIWFQNRRMKWKKEHKDEGPTA 196
>gi|260791956|ref|XP_002590993.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276193|gb|EEN47004.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 320
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 163 VQVWFQNRRAKWRKK 177
>gi|308487730|ref|XP_003106060.1| CRE-CEH-43 protein [Caenorhabditis remanei]
gi|308254634|gb|EFO98586.1| CRE-CEH-43 protein [Caenorhabditis remanei]
Length = 301
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDN 47
V++WFQNRR+K +K+ T+ R D+ +++EE + + SD+
Sbjct: 146 VKIWFQNRRSKQKKQKTP--GTSDRASDEDDDTEESKPESSPMSDS 189
>gi|269784915|ref|NP_001161609.1| Nkx1-like transcription factor [Saccoglossus kowalevskii]
gi|268054215|gb|ACY92594.1| Nkx1-like transcription factor [Saccoglossus kowalevskii]
Length = 339
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V++WFQNRRTKW+K++ A A Q
Sbjct: 249 VKIWFQNRRTKWKKQNPGMDANAPTVQ 275
>gi|341940962|sp|Q9QZW9.2|MNX1_MOUSE RecName: Full=Motor neuron and pancreas homeobox protein 1;
AltName: Full=Homeobox protein HB9
Length = 404
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV------------EESEEEEEDDYRHSDNAA 49
V++WFQNRR KW++ A+ A+ + Q E++EEE D A+
Sbjct: 285 VKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGTGKGGSEEKTEEELMGPPVSGDKAS 344
Query: 50 KRLRREL 56
R R+L
Sbjct: 345 GRRLRDL 351
>gi|341874456|gb|EGT30391.1| hypothetical protein CAEBREN_16705 [Caenorhabditis brenneri]
Length = 132
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V++WFQNRRTKW+K + + A + +E++ +
Sbjct: 45 VKIWFQNRRTKWKKHNPGQDANTPQTPPSSDETQIQP 81
>gi|126290304|ref|XP_001367970.1| PREDICTED: homeobox protein goosecoid-like [Monodelphis domestica]
Length = 250
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 2 VEVWFQNRRTKWR--KKHAAEMATAKRKQDQVEESEEEEEDDYRHSD 46
VEVWF+NRR KWR K+ ++E + RK + + E+ ++ SD
Sbjct: 199 VEVWFKNRRAKWRRQKRSSSEESENARKWSKASKPSPEKREEEGKSD 245
>gi|405966283|gb|EKC31588.1| Homeobox protein not2 [Crassostrea gigas]
Length = 275
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDN 47
V+VWFQNRR KWRK+ E AK + + + E E Y SD+
Sbjct: 200 VKVWFQNRRIKWRKQ-TLEQQQAKLARFDLFKDSVESESAYSDSDD 244
>gi|301775013|ref|XP_002922930.1| PREDICTED: t-cell leukemia homeobox protein 3-like [Ailuropoda
melanoleuca]
Length = 292
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 211 VKTWFQNRRTKWRRQ-TAEEREAERQQ 236
>gi|394997381|gb|AFN44011.1| homeodomain transcription factor Not [Strongylocentrotus
purpuratus]
Length = 491
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 2 VEVWFQNRRTKWRK----KHAAEMATAKRKQDQVEESEEEEEDD 41
V+VWFQNRR KWRK K +A + Q+ ES+ E+D
Sbjct: 306 VKVWFQNRRIKWRKQNFEKQQVHLAHIRAVQESRHESDPSSEED 349
>gi|312376647|gb|EFR23671.1| hypothetical protein AND_12459 [Anopheles darlingi]
Length = 1930
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK H
Sbjct: 574 VKVWFQNRRIKWRKHH 589
>gi|156351449|ref|XP_001622516.1| predicted protein [Nematostella vectensis]
gi|156209075|gb|EDO30416.1| predicted protein [Nematostella vectensis]
Length = 168
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 16/20 (80%)
Query: 1 MVEVWFQNRRTKWRKKHAAE 20
M EVWFQNRR KWRK+ A+
Sbjct: 1 MYEVWFQNRRAKWRKREKAQ 20
>gi|226530953|ref|NP_064328.2| motor neuron and pancreas homeobox protein 1 [Mus musculus]
gi|124376012|gb|AAI32284.1| Motor neuron and pancreas homeobox 1 [Mus musculus]
gi|148705297|gb|EDL37244.1| homeobox gene HB9 [Mus musculus]
Length = 404
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV------------EESEEEEEDDYRHSDNAA 49
V++WFQNRR KW++ A+ A+ + Q E++EEE D A+
Sbjct: 285 VKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGTGKGGSEEKTEEELMGPPVSGDKAS 344
Query: 50 KRLRREL 56
R R+L
Sbjct: 345 GRRLRDL 351
>gi|157278547|ref|NP_001098374.1| Rx3 protein [Oryzias latipes]
gi|15667414|emb|CAC69975.1| Rx3 protein [Oryzias latipes]
Length = 292
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 147 VQVWFQNRRAKWRRQEKLEVSSIK 170
>gi|410975944|ref|XP_003994387.1| PREDICTED: T-cell leukemia homeobox protein 1 [Felis catus]
Length = 311
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 226 VKTWFQNRRTKWRRQTAEEREAERQQANRI 255
>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 156 VQVWFQNRRAKWRKK 170
>gi|340730419|gb|AEK64850.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 156 VQVWFQNRRAKWRKK 170
>gi|170059587|ref|XP_001865428.1| paired box protein [Culex quinquefasciatus]
gi|167878294|gb|EDS41677.1| paired box protein [Culex quinquefasciatus]
Length = 340
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 173 VQVWFQNRRAKWRKREKA 190
>gi|260791952|ref|XP_002590991.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276191|gb|EEN47002.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 300
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 156 VQVWFQNRRAKWRKK 170
>gi|195486714|ref|XP_002091622.1| GE12148 [Drosophila yakuba]
gi|194177723|gb|EDW91334.1| GE12148 [Drosophila yakuba]
Length = 906
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWR++ +E
Sbjct: 605 VQVWFQNRRAKWRRQEKSE 623
>gi|195346236|ref|XP_002039672.1| GM15784 [Drosophila sechellia]
gi|194135021|gb|EDW56537.1| GM15784 [Drosophila sechellia]
Length = 895
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWR++ +E
Sbjct: 594 VQVWFQNRRAKWRRQEKSE 612
>gi|2394304|gb|AAB70267.1| retinal homeobox 1 [Xenopus laevis]
Length = 322
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 174 VQVWFQNRRAKWRRQEKLEVTSMK 197
>gi|444722073|gb|ELW62777.1| Homeobox protein HMX1 [Tupaia chinensis]
Length = 535
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 406 VKIWFQNRRNKWKRQLAAELEAA 428
>gi|354492242|ref|XP_003508258.1| PREDICTED: homeobox protein ARX-like [Cricetulus griseus]
Length = 346
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 156 VQVWFQNRRAKWRKREKAGAQT 177
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 336 VQVWFQNRRAKWRKREKAGAQT 357
>gi|332248255|ref|XP_003273280.1| PREDICTED: LOW QUALITY PROTEIN: T-cell leukemia homeobox protein 3
[Nomascus leucogenys]
Length = 291
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR +H E A R Q
Sbjct: 210 VKTWFQNRRTKWR-RHTVEDREADRLQ 235
>gi|432923640|ref|XP_004080488.1| PREDICTED: homeobox protein HMX3-B-like [Oryzias latipes]
Length = 290
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 210 VKIWFQNRRNKWKRQLAAELEAA 232
>gi|281339589|gb|EFB15173.1| hypothetical protein PANDA_011967 [Ailuropoda melanoleuca]
Length = 278
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 197 VKTWFQNRRTKWRRQ-TAEEREAERQQ 222
>gi|157278545|ref|NP_001098373.1| retinal homeobox protein Rx2 [Oryzias latipes]
gi|17380303|sp|Q9I9A2.1|RX2_ORYLA RecName: Full=Retinal homeobox protein Rx2
gi|7635917|emb|CAB88703.1| Rx2 transcription factor [Oryzias latipes]
Length = 327
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + +T K
Sbjct: 181 VQVWFQNRRAKWRRQEKMDTSTMK 204
>gi|395518788|ref|XP_003763539.1| PREDICTED: homeobox protein ARX [Sarcophilus harrisii]
Length = 339
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 149 VQVWFQNRRAKWRKREKAGAQT 170
>gi|395501931|ref|XP_003755340.1| PREDICTED: homeobox protein HMX3 [Sarcophilus harrisii]
Length = 282
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 198 VKIWFQNRRNKWKRQLAAELEAA 220
>gi|301508010|gb|ADK77973.1| aristaless-related homeobox protein [Macropus eugenii]
Length = 552
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 362 VQVWFQNRRAKWRKREKAGAQT 383
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 376 VQVWFQNRRAKWRKREKAGAQT 397
>gi|432936628|ref|XP_004082200.1| PREDICTED: homeobox protein goosecoid-like [Oryzias latipes]
Length = 238
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 2 VEVWFQNRRTKWR--KKHAAEMATAKRKQDQVEESEEEEE 39
VEVWF+NRR KWR K+ ++E +K +Q ++E+ E
Sbjct: 190 VEVWFKNRRAKWRRQKRSSSEEPENPQKWNQRAQTEKSCE 229
>gi|301614476|ref|XP_002936715.1| PREDICTED: retinal homeobox protein Rx-B [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 175 VQVWFQNRRAKWRRQEKLEVTSMK 198
>gi|148230627|ref|NP_001081689.1| retinal homeobox protein Rx-B [Xenopus laevis]
gi|292495034|sp|O42567.2|RXB_XENLA RecName: Full=Retinal homeobox protein Rx-B; AltName: Full=Retina
and anterior neural fold homeobox protein B; AltName:
Full=Rx2A; Short=Xrx2
gi|114107824|gb|AAI23154.1| Rx2A protein [Xenopus laevis]
Length = 325
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 174 VQVWFQNRRAKWRRQEKLEVTSMK 197
>gi|157136039|ref|XP_001656740.1| hypothetical protein AaeL_AAEL003372 [Aedes aegypti]
gi|108881108|gb|EAT45333.1| AAEL003372-PA [Aedes aegypti]
Length = 181
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK H
Sbjct: 65 VKVWFQNRRIKWRKHH 80
>gi|2240022|gb|AAB62323.1| retinal homeobox 2A [Xenopus laevis]
Length = 325
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 174 VQVWFQNRRAKWRRQEKLEVTSMK 197
>gi|426355290|ref|XP_004045058.1| PREDICTED: uncharacterized protein LOC101137118 [Gorilla gorilla
gorilla]
Length = 879
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 555 VQVWFQNRRAKWRKK 569
>gi|260816453|ref|XP_002602985.1| absent from olfactores homeobox [Branchiostoma floridae]
gi|229288300|gb|EEN58997.1| absent from olfactores homeobox [Branchiostoma floridae]
Length = 267
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V+ WFQNRRTKW+K+ AA M
Sbjct: 184 VKTWFQNRRTKWKKQTAARM 203
>gi|82245461|sp|Q90XN9.1|HMX3B_ORYLA RecName: Full=Homeobox protein HMX3-B; AltName: Full=Homeobox
protein H6 family member 3-B; AltName: Full=Homeobox
protein Nkx-5.1.2; AltName: Full=OlNkx-5.1.2
gi|15637261|gb|AAL04485.1|AF365971_1 transcription factor Nkx5-1.2 [Oryzias latipes]
Length = 290
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 210 VKIWFQNRRNKWKRQLAAELEAA 232
>gi|426366479|ref|XP_004050285.1| PREDICTED: homeobox protein HMX3 [Gorilla gorilla gorilla]
Length = 563
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 477 VKIWFQNRRNKWKRQLAAELEAA 499
>gi|348552206|ref|XP_003461919.1| PREDICTED: homeobox protein HMX1-like [Cavia porcellus]
Length = 372
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 272 VKIWFQNRRNKWKRQLAAELEAA 294
>gi|334311449|ref|XP_003339620.1| PREDICTED: LOW QUALITY PROTEIN: t-cell leukemia homeobox protein
3-like [Monodelphis domestica]
Length = 290
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 209 VKTWFQNRRTKWRRQ-TAEEREAERQQ 234
>gi|17380298|sp|O42356.2|RX1_DANRE RecName: Full=Retinal homeobox protein Rx1
gi|9903605|gb|AAB62325.2| retinal homeobox protein [Danio rerio]
Length = 330
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + +T K
Sbjct: 181 VQVWFQNRRAKWRRQEKIDASTMK 204
>gi|41282110|ref|NP_571300.2| retinal homeobox protein Rx1 [Danio rerio]
gi|38173897|gb|AAH60890.1| Retinal homeobox gene 1 [Danio rerio]
Length = 330
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + +T K
Sbjct: 181 VQVWFQNRRAKWRRQEKIDASTMK 204
>gi|268579179|ref|XP_002644572.1| C. briggsae CBR-CEH-1 protein [Caenorhabditis briggsae]
Length = 132
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V++WFQNRRTKW+K + + A + +E+ +
Sbjct: 45 VKIWFQNRRTKWKKHNPGQDANTPQTPPSSDEAPVQP 81
>gi|410976267|ref|XP_003994544.1| PREDICTED: homeobox protein HMX3 [Felis catus]
Length = 242
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 156 VKIWFQNRRNKWKRQLAAELEAA 178
>gi|395530279|ref|XP_003767224.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1
[Sarcophilus harrisii]
Length = 316
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRL 52
V+VWF+NRR K+RKK + +KQ + E E + D + D A L
Sbjct: 110 VQVWFKNRRAKFRKKQRSLQKEQLQKQKETEGGHGEGKADVPNPDGQAPAL 160
>gi|357617769|gb|EHJ70982.1| putative H6 family homeobox 3 [Danaus plexippus]
Length = 341
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 251 VKIWFQNRRNKWKRQLAAELEAA 273
>gi|348508580|ref|XP_003441832.1| PREDICTED: homeobox protein HMX3-B-like [Oreochromis niloticus]
Length = 290
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 210 VKIWFQNRRNKWKRQLAAELEAA 232
>gi|297680780|ref|XP_002818146.1| PREDICTED: homeobox protein Hox-A7 [Pongo abelii]
Length = 230
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E TA
Sbjct: 174 IKIWFQNRRMKWKKEHKDEGPTA 196
>gi|195469409|ref|XP_002099630.1| GE14563 [Drosophila yakuba]
gi|194185731|gb|EDW99342.1| GE14563 [Drosophila yakuba]
Length = 543
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
++VWF NRR KWR++ +M T +R D V+ S
Sbjct: 309 IQVWFSNRRAKWRREE--KMRTQRRSADTVDGS 339
>gi|395836097|ref|XP_003791003.1| PREDICTED: H2.0-like homeobox protein [Otolemur garnettii]
Length = 504
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRR KWR H+ E K K + E
Sbjct: 325 VKVWFQNRRMKWR--HSKEAQAQKDKDKEAGE 354
>gi|391337760|ref|XP_003743233.1| PREDICTED: uncharacterized protein LOC100900118 [Metaseiulus
occidentalis]
Length = 698
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
++ WFQNRRTKW+K+ A++ A+R
Sbjct: 157 IKTWFQNRRTKWKKQMTAKVKMAQR 181
>gi|307191995|gb|EFN75385.1| Homeobox protein ceh-19 [Harpegnathos saltator]
Length = 188
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
++ WFQNRRTKW+K+ + + A+R+
Sbjct: 114 IKTWFQNRRTKWKKQLTSRLKIAQRQ 139
>gi|345799373|ref|XP_546241.3| PREDICTED: T-cell leukemia homeobox protein 3 [Canis lupus
familiaris]
Length = 291
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|449475346|ref|XP_004176705.1| PREDICTED: LOW QUALITY PROTEIN: T-cell leukemia homeobox protein 3
[Taeniopygia guttata]
Length = 392
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 311 VKTWFQNRRTKWRRQ-TAEEREAERQQ 336
>gi|397479335|ref|XP_003810979.1| PREDICTED: LOW QUALITY PROTEIN: T-cell leukemia homeobox protein 3
[Pan paniscus]
Length = 291
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|348517767|ref|XP_003446404.1| PREDICTED: H2.0-like homeobox protein-like [Oreochromis niloticus]
Length = 379
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRELAAHC 60
V+VWFQNRR KWR H+ E K K E++E+ + SD+ + + L + C
Sbjct: 271 VKVWFQNRRMKWR--HSKEAQAQKDK-------EKDEKGEKNLSDSGGREPKEPLESEC 320
>gi|157820981|ref|NP_001099772.1| homeobox protein HMX3 [Rattus norvegicus]
gi|149061279|gb|EDM11702.1| similar to homeodomain protein (predicted) [Rattus norvegicus]
Length = 356
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|327279085|ref|XP_003224289.1| PREDICTED: t-cell leukemia homeobox protein 1-like [Anolis
carolinensis]
Length = 311
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 226 VKTWFQNRRTKWRRQTAEEREAERQQANRILMQLQQE 262
>gi|156405621|ref|XP_001640830.1| predicted protein [Nematostella vectensis]
gi|156227966|gb|EDO48767.1| predicted protein [Nematostella vectensis]
Length = 71
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAEM A
Sbjct: 46 VKIWFQNRRNKWKRQIAAEMEAA 68
>gi|344268964|ref|XP_003406326.1| PREDICTED: retinal homeobox protein Rx-like [Loxodonta africana]
Length = 341
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 176 VQVWFQNRRAKWRRQEKLEVSSMK 199
>gi|344254398|gb|EGW10502.1| Homeobox protein HMX3 [Cricetulus griseus]
Length = 257
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 172 VKIWFQNRRNKWKRQLAAELEAA 194
>gi|115647030|ref|XP_781057.2| PREDICTED: uncharacterized protein LOC575572 [Strongylocentrotus
purpuratus]
Length = 446
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 242 VQVWFQNRRAKWRKK 256
>gi|397498077|ref|XP_003819820.1| PREDICTED: uncharacterized protein LOC100992087 [Pan paniscus]
Length = 591
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 161 VQVWFQNRRAKWRKK 175
>gi|56181390|ref|NP_001007986.1| homeobox protein HMX3 [Gallus gallus]
gi|82070069|sp|O57601.1|HMX3_CHICK RecName: Full=Homeobox protein HMX3; AltName: Full=Homeobox protein
H6 family member 3; AltName: Full=Homeobox protein
Nkx-5.1; Short=cNkx5-1
gi|2739307|emb|CAA75921.1| Nkx5-1 protein [Gallus gallus]
Length = 308
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 225 VKIWFQNRRNKWKRQLAAELEAA 247
>gi|432945451|ref|XP_004083605.1| PREDICTED: H2.0-like homeobox protein-like [Oryzias latipes]
Length = 387
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEE 37
V+VWFQNRR KWR A+ K K+ + ++S E
Sbjct: 274 VKVWFQNRRMKWRHSKEAQAQKDKEKETKPDKSLSE 309
>gi|270009243|gb|EFA05691.1| developing brain homeobox [Tribolium castaneum]
Length = 386
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRL 52
V++WFQNRR KWR E+ A ++Q ++ D +D +L
Sbjct: 291 VKIWFQNRRMKWRNSKERELLAAGGSREQTLPNKNNPHPDLSDADGDKPKL 341
>gi|195585235|ref|XP_002082395.1| GD11547 [Drosophila simulans]
gi|194194404|gb|EDX07980.1| GD11547 [Drosophila simulans]
Length = 903
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWR++ +E
Sbjct: 602 VQVWFQNRRAKWRRQEKSE 620
>gi|395531409|ref|XP_003767771.1| PREDICTED: H2.0-like homeobox protein [Sarcophilus harrisii]
Length = 499
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V+VWFQNRR KWR H+ E K K+ E +
Sbjct: 331 VKVWFQNRRMKWR--HSKEAQAQKDKEKDPTEKQ 362
>gi|332016697|gb|EGI57540.1| Homeobox protein ARX [Acromyrmex echinatior]
Length = 287
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRKK A
Sbjct: 103 VQVWFQNRRAKWRKKEKA 120
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 58 VQVWFQNRRAKWRKREKAGAQT 79
>gi|357611334|gb|EHJ67427.1| hypothetical protein KGM_16069 [Danaus plexippus]
Length = 432
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
V+VWFQNRR KWRK + KR+ +V + +D
Sbjct: 198 VQVWFQNRRAKWRKAERLKEEQRKREGAEVLAKRDPADD 236
>gi|195121174|ref|XP_002005096.1| GI20286 [Drosophila mojavensis]
gi|193910164|gb|EDW09031.1| GI20286 [Drosophila mojavensis]
Length = 392
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 137 IKIWFQNRRTKWKRKYTSDVET 158
>gi|351710002|gb|EHB12921.1| Homeobox protein unc-4-like protein [Heterocephalus glaber]
Length = 133
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 16 VQVWFQNRRAKWRKK 30
>gi|242021601|ref|XP_002431233.1| Homeobox protein Hox-B1, putative [Pediculus humanus corporis]
gi|212516482|gb|EEB18495.1| Homeobox protein Hox-B1, putative [Pediculus humanus corporis]
Length = 192
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 15/16 (93%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK+H
Sbjct: 79 VKVWFQNRRIKWRKQH 94
>gi|2739071|gb|AAB94604.1| homeobox transcription factor HOXA7 [Homo sapiens]
gi|3097078|emb|CAA06713.1| hoxA7 [Homo sapiens]
gi|208966494|dbj|BAG73261.1| homeobox A7 [synthetic construct]
Length = 230
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E TA
Sbjct: 174 IKIWFQNRRMKWKKEHKDEGPTA 196
>gi|195158361|ref|XP_002020060.1| GL13779 [Drosophila persimilis]
gi|194116829|gb|EDW38872.1| GL13779 [Drosophila persimilis]
Length = 324
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 86 VKIWFQNRRNKWKRQLAAEL 105
>gi|195148028|ref|XP_002014976.1| GL18665 [Drosophila persimilis]
gi|194106929|gb|EDW28972.1| GL18665 [Drosophila persimilis]
Length = 370
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
V+VWFQNRR KWRK A + +RK++ E S
Sbjct: 96 VQVWFQNRRAKWRK--AERLKDEQRKRENGESS 126
>gi|116805350|ref|NP_061815.2| homeobox protein HMX1 [Homo sapiens]
gi|259016250|sp|Q9NP08.2|HMX1_HUMAN RecName: Full=Homeobox protein HMX1; AltName: Full=Homeobox protein
H6
gi|182888289|gb|AAI60031.1| H6 family homeobox 1 [synthetic construct]
Length = 348
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 247 VKIWFQNRRNKWKRQLAAELEAA 269
>gi|395838112|ref|XP_003791968.1| PREDICTED: homeobox protein ARX [Otolemur garnettii]
Length = 570
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 380 VQVWFQNRRAKWRKREKAGAQT 401
>gi|326920974|ref|XP_003206740.1| PREDICTED: homeobox protein goosecoid-like [Meleagris gallopavo]
Length = 246
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 2 VEVWFQNRRTKWR--KKHAAEMATAKRKQDQVEESEEEEEDDYRHSD 46
VEVWF+NRR KWR K+ ++E + +K ++ ++ E+ + SD
Sbjct: 195 VEVWFKNRRAKWRRQKRSSSEESENAQKWNKASKTSPEKRQEDGKSD 241
>gi|292619817|ref|XP_002664095.1| PREDICTED: homeobox protein HMX3-like [Danio rerio]
Length = 145
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 20/23 (86%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ +A
Sbjct: 93 VKIWFQNRRNKWKRQIAAELESA 115
>gi|410895429|ref|XP_003961202.1| PREDICTED: homeobox protein HMX3-B-like [Takifugu rubripes]
Length = 289
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 209 VKIWFQNRRNKWKRQLAAELEAA 231
>gi|194758609|ref|XP_001961554.1| GF14876 [Drosophila ananassae]
gi|190615251|gb|EDV30775.1| GF14876 [Drosophila ananassae]
Length = 496
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
VEVWF+NRR KWRK+ E ++ Q++
Sbjct: 408 VEVWFKNRRAKWRKQKREEQERLRKLQEE 436
>gi|126332298|ref|XP_001376731.1| PREDICTED: t-cell leukemia homeobox protein 2-like [Monodelphis
domestica]
Length = 286
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+ WFQNRRTKWR++ A E + +
Sbjct: 203 VKTWFQNRRTKWRRQTAEEREAERHR 228
>gi|47551103|ref|NP_999726.1| homeobox protein Hmx [Strongylocentrotus purpuratus]
gi|18202521|sp|Q26656.1|HMX_STRPU RecName: Full=Homeobox protein Hmx; Short=SpHmx; AltName:
Full=H6-like
gi|1332413|dbj|BAA12721.1| homeobox [Strongylocentrotus purpuratus]
Length = 405
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 20/23 (86%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ +A
Sbjct: 297 VKIWFQNRRNKWKRQMAAELESA 319
>gi|50355978|ref|NP_066305.2| T-cell leukemia homeobox protein 3 [Homo sapiens]
gi|109079745|ref|XP_001095250.1| PREDICTED: t-cell leukemia homeobox protein 3 [Macaca mulatta]
gi|291387812|ref|XP_002710422.1| PREDICTED: T-cell leukemia homeobox 3 [Oryctolagus cuniculus]
gi|297676637|ref|XP_002816233.1| PREDICTED: T-cell leukemia homeobox protein 3 [Pongo abelii]
gi|402873390|ref|XP_003900560.1| PREDICTED: T-cell leukemia homeobox protein 3 [Papio anubis]
gi|115502468|sp|O43711.3|TLX3_HUMAN RecName: Full=T-cell leukemia homeobox protein 3; AltName:
Full=Homeobox protein Hox-11L2
gi|16878171|gb|AAH17291.1| T-cell leukemia homeobox 3 [Homo sapiens]
gi|119581856|gb|EAW61452.1| T-cell leukemia homeobox 3 [Homo sapiens]
gi|123984469|gb|ABM83580.1| T-cell leukemia homeobox 3 [synthetic construct]
gi|123998435|gb|ABM86819.1| T-cell leukemia homeobox 3 [synthetic construct]
gi|123998992|gb|ABM87084.1| T-cell leukemia homeobox 3 [synthetic construct]
Length = 291
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|410912452|ref|XP_003969703.1| PREDICTED: homeobox protein XHOX-7.1-like [Takifugu rubripes]
Length = 324
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 2 VEVWFQNRRTKW-RKKHAAEMATAKRKQDQVE-----ESEEEEEDDYRHSDNAAKR 51
V++WFQNRR KW R + A E A A + D ++ E+ D+ R + A +R
Sbjct: 190 VKIWFQNRRMKWKRSRKAKEQAGASAQSDMQRLRGEGKTTAEKPDESRRAAGAEER 245
>gi|405959975|gb|EKC25942.1| Homeobox protein unc-4-like protein [Crassostrea gigas]
Length = 392
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 147 VQVWFQNRRAKWRKK 161
>gi|395817065|ref|XP_003781996.1| PREDICTED: T-cell leukemia homeobox protein 3 [Otolemur garnettii]
Length = 291
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|348528067|ref|XP_003451540.1| PREDICTED: retinal homeobox protein Rx3-like [Oreochromis
niloticus]
Length = 305
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 155 VQVWFQNRRAKWRRQEKLEVSSIK 178
>gi|344265259|ref|XP_003404702.1| PREDICTED: T-cell leukemia homeobox protein 3-like [Loxodonta
africana]
Length = 291
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|335304101|ref|XP_003134109.2| PREDICTED: T-cell leukemia homeobox protein 3-like [Sus scrofa]
Length = 291
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 345 VQVWFQNRRAKWRKREKAGAQT 366
>gi|156387437|ref|XP_001634210.1| predicted protein [Nematostella vectensis]
gi|156221290|gb|EDO42147.1| predicted protein [Nematostella vectensis]
gi|295389204|gb|ADG03432.1| retinal homeobox [Nematostella vectensis]
Length = 266
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQN+R KWR++ EMA+
Sbjct: 129 VQVWFQNKRAKWRREEKMEMAS 150
>gi|126321609|ref|XP_001366025.1| PREDICTED: retinal homeobox protein Rx-like [Monodelphis domestica]
Length = 350
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVTSMK 203
>gi|254826778|ref|NP_064300.2| T-cell leukemia homeobox protein 3 [Mus musculus]
gi|293339992|ref|XP_001064411.2| PREDICTED: T-cell leukemia homeobox protein 3 [Rattus norvegicus]
gi|293351408|ref|XP_573065.2| PREDICTED: T-cell leukemia homeobox protein 3 [Rattus norvegicus]
gi|348574959|ref|XP_003473257.1| PREDICTED: T-cell leukemia homeobox protein 3-like [Cavia
porcellus]
gi|74202606|dbj|BAE24864.1| unnamed protein product [Mus musculus]
gi|148691796|gb|EDL23743.1| T-cell leukemia, homeobox 3 [Mus musculus]
gi|149052252|gb|EDM04069.1| similar to HOX11L2 (predicted), isoform CRA_a [Rattus norvegicus]
gi|219518746|gb|AAI45632.1| T-cell leukemia, homeobox 3 [Mus musculus]
gi|223461240|gb|AAI41309.1| Tlx3 protein [Mus musculus]
gi|431918137|gb|ELK17365.1| T-cell leukemia homeobox protein 3 [Pteropus alecto]
Length = 291
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|24497556|ref|NP_008827.2| homeobox protein Hox-A7 [Homo sapiens]
gi|311033439|sp|P31268.3|HXA7_HUMAN RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox 1.1; AltName: Full=Homeobox protein Hox-1A
gi|51094977|gb|EAL24221.1| homeo box A7 [Homo sapiens]
gi|119614283|gb|EAW93877.1| homeobox A7 [Homo sapiens]
gi|147897929|gb|AAI40402.1| Homeobox A7 [synthetic construct]
gi|151555121|gb|AAI48693.1| Homeobox A7 [synthetic construct]
Length = 230
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E TA
Sbjct: 174 IKIWFQNRRMKWKKEHKDEGPTA 196
>gi|403268181|ref|XP_003926160.1| PREDICTED: retinal homeobox protein Rx [Saimiri boliviensis
boliviensis]
Length = 282
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|397514171|ref|XP_003827369.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pan
paniscus]
Length = 309
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 188 VQVWFQNRRAKWRRQEKLEVSSMK 211
>gi|350403982|ref|XP_003486970.1| PREDICTED: hypothetical protein LOC100748877 [Bombus impatiens]
Length = 432
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
++ WFQNRRTKW+K+ + + A+R+
Sbjct: 355 IKTWFQNRRTKWKKQLTSRLKIAQRQ 380
>gi|194219608|ref|XP_001503176.2| PREDICTED: t-cell leukemia homeobox protein 3-like [Equus caballus]
Length = 287
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|403260089|ref|XP_003922520.1| PREDICTED: homeobox protein HMX3, partial [Saimiri boliviensis
boliviensis]
Length = 265
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 180 VKIWFQNRRNKWKRQLAAELEAA 202
>gi|289063413|ref|NP_001165900.1| H6 family homeobox 1 [Macaca mulatta]
Length = 347
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 246 VKIWFQNRRNKWKRQLAAELEAA 268
>gi|390335215|ref|XP_781292.3| PREDICTED: hematopoietically-expressed homeobox protein hhex-like
[Strongylocentrotus purpuratus]
Length = 317
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDN 47
V+ WFQNRR KWR+ E+ T K + D+ E+ + + + + S N
Sbjct: 232 VKTWFQNRRAKWRRL-KQEVPTGKGEGDEREDEIKAHQPNQQTSHN 276
>gi|351704297|gb|EHB07216.1| Homeobox protein Hox-A7 [Heterocephalus glaber]
Length = 232
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRR KW+K+H E +T
Sbjct: 174 IKIWFQNRRMKWKKEHKEEGST 195
>gi|426257993|ref|XP_004022605.1| PREDICTED: homeobox protein ARX [Ovis aries]
Length = 462
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 305 VQVWFQNRRAKWRKREKAGAQT 326
>gi|242531293|gb|ACS92971.1| Drg11 [Ptychodera flava]
Length = 247
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLR 53
V+VWFQNRR KWRK M K ++++ E D DN + R
Sbjct: 33 VQVWFQNRRAKWRK-----MERMKHDNQTENKTDDSTESDPGSKDNKPEESR 79
>gi|208401106|gb|ACI26669.1| NK-like homeobox protein 1b [Capitella teleta]
Length = 165
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 17/19 (89%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V++WFQNRRTKW+K++ +
Sbjct: 76 VKIWFQNRRTKWKKQNPGQ 94
>gi|18859337|ref|NP_571301.1| retinal homeobox protein Rx2 [Danio rerio]
gi|18202035|sp|O42357.1|RX2_DANRE RecName: Full=Retinal homeobox protein Rx2
gi|2240028|gb|AAB62326.1| retinal homeobox protein [Danio rerio]
Length = 327
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + T K
Sbjct: 179 VQVWFQNRRAKWRRQEKMDTGTMK 202
>gi|402852392|ref|XP_003890907.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein HMX1-like [Papio
anubis]
Length = 346
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 247 VKIWFQNRRNKWKRQLAAELEAA 269
>gi|301762936|ref|XP_002916894.1| PREDICTED: hypothetical protein LOC100482582 [Ailuropoda
melanoleuca]
Length = 805
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 VEVWFQNRRTKWRKKHAAE-MATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRELA 57
V++WFQNRR KW+K++ + ++K +Q+++E+ + E + +A K + LA
Sbjct: 436 VKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKLERAPEAADEGDAQKGDKNSLA 492
>gi|395830950|ref|XP_003788575.1| PREDICTED: homeobox protein Hox-A7 [Otolemur garnettii]
gi|202070729|gb|ACH95317.1| homeobox A7 (predicted) [Otolemur garnettii]
Length = 226
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E A
Sbjct: 174 IKIWFQNRRMKWKKEHKEEGPAA 196
>gi|148226549|ref|NP_001081191.1| homeobox protein not2 [Xenopus laevis]
gi|82245674|sp|Q91770.1|NOT2_XENLA RecName: Full=Homeobox protein not2; Short=Xnot-2; Short=Xnot2
gi|436207|gb|AAA19694.1| homeobox protein [Xenopus laevis]
Length = 233
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+VWFQNRR KWRK+ + E AK Q
Sbjct: 179 VKVWFQNRRIKWRKQ-SLEQKKAKLSQ 204
>gi|199581471|gb|ACH89437.1| NK-like homeobox protein 5 [Capitella teleta]
Length = 402
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AA++
Sbjct: 298 VKIWFQNRRNKWKRQLAADI 317
>gi|158292555|ref|XP_313972.3| AGAP005096-PA [Anopheles gambiae str. PEST]
gi|157017047|gb|EAA09363.3| AGAP005096-PA [Anopheles gambiae str. PEST]
Length = 898
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWR++ +E
Sbjct: 593 VQVWFQNRRAKWRRQEKSE 611
>gi|444729278|gb|ELW69703.1| Homeobox protein HMX3 [Tupaia chinensis]
Length = 333
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 247 VKIWFQNRRNKWKRQLAAELEAA 269
>gi|148233906|ref|NP_001079215.1| T-cell leukemia homeobox 3 [Xenopus laevis]
gi|10185812|gb|AAG14452.1|AF283693_1 homeobox protein XHox11L2 [Xenopus laevis]
Length = 292
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 210 VKTWFQNRRTKWRRQTAEEREAERQQANRL 239
>gi|113204951|gb|ABI34209.1| RT01040p [Drosophila melanogaster]
gi|113205015|gb|ABI34241.1| RT01140p [Drosophila melanogaster]
Length = 263
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 183 VKIWFQNRRNKWKRQLAAEL 202
>gi|62859509|ref|NP_001015902.1| T-cell leukemia homeobox 3 [Xenopus (Silurana) tropicalis]
gi|89268076|emb|CAJ83135.1| T-cell leukemia, homeobox 3 [Xenopus (Silurana) tropicalis]
Length = 292
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 211 VKTWFQNRRTKWRRQTAEEREAERQQANRL 240
>gi|402881254|ref|XP_003904190.1| PREDICTED: T-cell leukemia homeobox protein 1 [Papio anubis]
Length = 412
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 327 VKTWFQNRRTKWRRQTAEEREAERQQANRI 356
>gi|25092685|ref|NP_739572.1| T-cell leukemia homeobox protein 3 [Danio rerio]
gi|22086281|gb|AAM90624.1|AF398519_1 T-cell leukemia associated homeodomain protein Tlx3b [Danio rerio]
gi|190336867|gb|AAI62310.1| T-cell leukemia, homeobox 3b [Danio rerio]
gi|190339422|gb|AAI62334.1| T-cell leukemia, homeobox 3b [Danio rerio]
Length = 300
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 218 VKTWFQNRRTKWRRQTAEEREAERQQANRL 247
>gi|322366524|gb|ADW95336.1| goosecoid [Paracentrotus lividus]
Length = 329
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
VEVWF+NRR KWRK+ AKR +
Sbjct: 195 VEVWFKNRRAKWRKQKREPQEAAKRASE 222
>gi|296475890|tpg|DAA18005.1| TPA: T-cell leukemia homeobox 3-like [Bos taurus]
Length = 291
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|22086278|gb|AAM90623.1|AF398518_1 T-cell leukemia associated homeodomain protein Tlx3a [Danio rerio]
Length = 301
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 226 VKTWFQNRRTKWRRQTAEEREAERQQANRLMLQLQQE 262
>gi|348501548|ref|XP_003438331.1| PREDICTED: homeobox protein HMX3-A-like [Oreochromis niloticus]
Length = 303
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 219 VKIWFQNRRNKWKRQLAAELEAA 241
>gi|195497398|ref|XP_002096082.1| GE25478 [Drosophila yakuba]
gi|194182183|gb|EDW95794.1| GE25478 [Drosophila yakuba]
Length = 262
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 182 VKIWFQNRRNKWKRQLAAEL 201
>gi|195391542|ref|XP_002054419.1| GJ24443 [Drosophila virilis]
gi|194152505|gb|EDW67939.1| GJ24443 [Drosophila virilis]
Length = 289
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 207 VKIWFQNRRNKWKRQLAAEL 226
>gi|157103664|ref|XP_001648076.1| nk homeobox protein [Aedes aegypti]
gi|108869377|gb|EAT33602.1| AAEL014125-PA [Aedes aegypti]
Length = 303
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 221 VKIWFQNRRNKWKRQLAAEL 240
>gi|46047377|ref|NP_990864.1| homeobox protein HMX1 [Gallus gallus]
gi|82112982|sp|Q9DE09.1|HMX1_CHICK RecName: Full=Homeobox protein HMX1; AltName: Full=GH6; AltName:
Full=Homeobox protein H6
gi|12082651|gb|AAG48561.1|AF227921_1 homeodomain protein GH6 [Gallus gallus]
Length = 333
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AA++ A
Sbjct: 245 VKIWFQNRRNKWKRQLAADLEAA 267
>gi|308472155|ref|XP_003098306.1| CRE-UNC-4 protein [Caenorhabditis remanei]
gi|308269154|gb|EFP13107.1| CRE-UNC-4 protein [Caenorhabditis remanei]
Length = 249
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
V+VWFQNRR KWRK+ ++ K+D
Sbjct: 131 VQVWFQNRRAKWRKREQNRHGGSEPKKD 158
>gi|47219885|emb|CAF97155.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 59 VQVWFQNRRAKWRRQEKLEVSSIK 82
>gi|355694763|gb|AER99778.1| h2.0-like homeobox protein [Mustela putorius furo]
Length = 425
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRR KWR H+ E K K + E
Sbjct: 319 VKVWFQNRRMKWR--HSKEAQAQKDKDKEAGE 348
>gi|348579148|ref|XP_003475343.1| PREDICTED: homeobox protein NOBOX-like [Cavia porcellus]
Length = 583
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
++VWFQNRR KWRK E K KQD
Sbjct: 240 LQVWFQNRRAKWRK---LEKLNGKEKQD 264
>gi|345495087|ref|XP_003427431.1| PREDICTED: hypothetical protein LOC100679869 [Nasonia vitripennis]
Length = 649
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRRTKW+K+ A A ++Q
Sbjct: 432 VKIWFQNRRTKWKKQDNISNAEAAEHKNQ 460
>gi|189240302|ref|XP_001813949.1| PREDICTED: similar to CG34340 CG34340-PD [Tribolium castaneum]
Length = 283
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
V+VWFQNRR KWRK A + +RK+D
Sbjct: 113 VQVWFQNRRAKWRK--AERLKEEQRKRD 138
>gi|410949264|ref|XP_003981343.1| PREDICTED: T-cell leukemia homeobox protein 3 [Felis catus]
Length = 341
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 260 VKTWFQNRRTKWRRQ-TAEEREAERQQ 285
>gi|395505077|ref|XP_003756872.1| PREDICTED: T-cell leukemia homeobox protein 3 [Sarcophilus
harrisii]
Length = 392
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 311 VKTWFQNRRTKWRRQ-TAEEREAERQQ 336
>gi|383861065|ref|XP_003706007.1| PREDICTED: retinal homeobox protein Rx2-like [Megachile rotundata]
Length = 440
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 18/28 (64%), Gaps = 5/28 (17%)
Query: 2 VEVWFQNRRTKWRK-----KHAAEMATA 24
V+VWFQNRR KWRK K A MAT
Sbjct: 200 VQVWFQNRRAKWRKREPPRKTAGYMATG 227
>gi|161612278|gb|AAI55954.1| Unknown (protein for IMAGE:7974039) [Xenopus laevis]
Length = 160
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 76 VKIWFQNRRNKWKRQLAAELEAA 98
>gi|350418228|ref|XP_003491793.1| PREDICTED: hypothetical protein LOC100748658 [Bombus impatiens]
Length = 421
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK H
Sbjct: 376 VKVWFQNRRIKWRKHH 391
>gi|194205572|ref|XP_001915073.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein HMX3-like [Equus
caballus]
Length = 358
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 272 VKIWFQNRRNKWKRQLAAELEAA 294
>gi|195456001|ref|XP_002074959.1| GK23335 [Drosophila willistoni]
gi|194171044|gb|EDW85945.1| GK23335 [Drosophila willistoni]
Length = 937
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWR++ +E
Sbjct: 639 VQVWFQNRRAKWRRQEKSE 657
>gi|62526075|dbj|BAD95554.1| Hoxb-7 [Gallus gallus]
Length = 145
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 2 VEVWFQNRRTKWRK--KHAAEMATAKRKQDQVEESEEE 37
+++WFQNRR KW+K K A ++++ K D VE+ EEE
Sbjct: 109 IKIWFQNRRMKWKKENKTACSGSSSQEKAD-VEDDEEE 145
>gi|301618086|ref|XP_002938457.1| PREDICTED: homeobox protein unc-4 homolog [Xenopus (Silurana)
tropicalis]
Length = 483
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 145 VQVWFQNRRAKWRKK 159
>gi|258504626|gb|ACV72950.1| CEH-23 [Caenorhabditis remanei]
Length = 278
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 244 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 277
>gi|300793790|ref|NP_001180120.1| T-cell leukemia homeobox protein 3 [Bos taurus]
gi|194687059|ref|XP_001789338.1| PREDICTED: T-cell leukemia homeobox protein 3-like [Bos taurus]
Length = 291
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|400180330|gb|AFP73298.1| Hoxa1alpha [Polyodon spathula]
Length = 315
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
V++WFQNRR K +K+ + A K +++E EE +
Sbjct: 254 VKIWFQNRRMKQKKREKEGLIPASSKTPEIDEKAEESSE 292
>gi|340717838|ref|XP_003397382.1| PREDICTED: hypothetical protein LOC100645289 [Bombus terrestris]
Length = 421
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK H
Sbjct: 376 VKVWFQNRRIKWRKHH 391
>gi|326934275|ref|XP_003213217.1| PREDICTED: retinal homeobox protein Rx1-like [Meleagris gallopavo]
Length = 228
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E ++ K
Sbjct: 80 VQVWFQNRRAKWRRQEKMEASSMK 103
>gi|161353498|ref|NP_705937.2| T-cell leukemia homeobox protein 2 [Danio rerio]
gi|118763878|gb|AAI28815.1| Tlx3a protein [Danio rerio]
Length = 301
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 226 VKTWFQNRRTKWRRQTAEEREAERQQANRLMLQLQQE 262
>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
Length = 282
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMA 22
V+VWFQNRR KWR++ E A
Sbjct: 135 VQVWFQNRRAKWRRQEKMEAA 155
>gi|344030211|ref|NP_989435.2| retinal homeobox protein Rx2 [Gallus gallus]
gi|18203380|sp|Q9PVY0.1|RX1_CHICK RecName: Full=Retinal homeobox protein Rx1; Short=cRax1
gi|23451261|gb|AAN32719.1|AF420601_1 homeobox transcription factor RAX2 [Gallus gallus]
gi|6002393|dbj|BAA84748.1| homeobox protein cRaxL/Rax1/Rx1 [Gallus gallus]
Length = 228
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E ++ K
Sbjct: 80 VQVWFQNRRAKWRRQEKMEASSMK 103
>gi|281339716|gb|EFB15300.1| hypothetical protein PANDA_014123 [Ailuropoda melanoleuca]
Length = 219
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|213512948|ref|NP_001133051.1| homeobox protein HoxB8ab [Salmo salar]
gi|157816103|gb|ABV82070.1| homeobox protein HoxB8ab [Salmo salar]
gi|158702277|gb|ABW77475.1| homeobox protien HoxB8ab [Salmo salar]
Length = 246
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAE-MATAKRKQDQVEESEEEEE 39
V++WFQNRR KW+K++ + ++K +Q+++E+ + ++E
Sbjct: 190 VKIWFQNRRMKWKKENNKDKFPSSKTEQEEIEKEKRQKE 228
>gi|395543194|ref|XP_003773505.1| PREDICTED: T-cell leukemia homeobox protein 2 [Sarcophilus
harrisii]
Length = 286
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+ WFQNRRTKWR++ A E + +
Sbjct: 203 VKTWFQNRRTKWRRQTAEEREAERHR 228
>gi|332692486|gb|AEE90166.1| Homeobox B8a [Anguilla anguilla]
gi|385654477|gb|AFI61978.1| Hox-B8a [Anguilla japonica]
Length = 248
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAE-MATAKRKQDQVEESEEEEE 39
V++WFQNRR KW+K++ + ++K +Q+ +E+ +E+E
Sbjct: 192 VKIWFQNRRMKWKKENNKDKFPSSKSEQEAIEKERKEKE 230
>gi|387231881|gb|AFJ72651.1| homeobox C8, partial [Myotis ricketti]
Length = 81
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V++WFQNRR KW+K++ + R +++VEE
Sbjct: 47 VKIWFQNRRMKWKKENNKDKLPGARDEEKVEE 78
>gi|170575079|ref|XP_001893090.1| Homeobox protein unc-4-like [Brugia malayi]
gi|158601067|gb|EDP38070.1| Homeobox protein unc-4-like [Brugia malayi]
Length = 143
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 1 MVEVWFQNRRTKWRKK 16
M+ VWFQNRR KWRKK
Sbjct: 1 MIYVWFQNRRAKWRKK 16
>gi|270014244|gb|EFA10692.1| hypothetical protein TcasGA2_TC011749 [Tribolium castaneum]
Length = 295
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E ++ +++ S + E
Sbjct: 212 VKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAE 248
>gi|405972772|gb|EKC37521.1| H2.0-like homeobox protein [Crassostrea gigas]
Length = 310
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+VWFQNRR KWR HA + D+ E EE
Sbjct: 241 VKVWFQNRRMKWR--HAQQTKEKSNTDDKSSEPLVEE 275
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 234 VQVWFQNRRAKWRKREKAGAQT 255
>gi|395842723|ref|XP_003794163.1| PREDICTED: homeobox protein HMX3 [Otolemur garnettii]
Length = 340
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 254 VKIWFQNRRNKWKRQLAAELEAA 276
>gi|321462491|gb|EFX73514.1| hypothetical protein DAPPUDRAFT_38070 [Daphnia pulex]
Length = 63
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 15/16 (93%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK+H
Sbjct: 44 VKVWFQNRRIKWRKQH 59
>gi|195029899|ref|XP_001987809.1| GH19750 [Drosophila grimshawi]
gi|193903809|gb|EDW02676.1| GH19750 [Drosophila grimshawi]
Length = 385
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 20/22 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRRTKW++K+ +++ T
Sbjct: 135 IKIWFQNRRTKWKRKYTSDVET 156
>gi|118403499|ref|NP_001072829.1| homeobox protein HMX3 [Xenopus (Silurana) tropicalis]
gi|123908806|sp|Q0P4W6.1|HMX3_XENTR RecName: Full=Homeobox protein HMX3; AltName: Full=Homeobox protein
H6 family member 3; AltName: Full=Homeobox protein
Nkx-5.1
gi|112418486|gb|AAI21875.1| H6 family homeobox 3 [Xenopus (Silurana) tropicalis]
Length = 306
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 222 VKIWFQNRRNKWKRQLAAELEAA 244
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 337 VQVWFQNRRAKWRKREKAGAQT 358
>gi|51979090|gb|AAU20320.1| retinal homeobox [Platynereis dumerilii]
Length = 304
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
V+VWFQNRR KWR++ E A+ K ++
Sbjct: 159 VQVWFQNRRAKWRRQEKLETASLKLNEN 186
>gi|51094691|gb|EAL23940.1| similar to Unc4.1 homeobox [Homo sapiens]
Length = 344
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+VWFQNRR KWRKK + + + + EE
Sbjct: 282 VQVWFQNRRAKWRKKENTKKGPGRPAHNSHPTTPAEE 318
>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
Length = 282
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMA 22
V+VWFQNRR KWR++ E A
Sbjct: 135 VQVWFQNRRAKWRRQEKMEAA 155
>gi|443688669|gb|ELT91289.1| hypothetical protein CAPTEDRAFT_220261 [Capitella teleta]
Length = 424
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDD 41
V++WFQNRR KWR E+ ++ ++ S++ + D
Sbjct: 314 VKIWFQNRRMKWRNSKERELLSSGGSREATIPSKDNPKPD 353
>gi|340718764|ref|XP_003397833.1| PREDICTED: h2.0-like homeobox protein-like [Bombus terrestris]
Length = 234
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHS 45
V+VWFQNRR KWR +E Q E S + +DD + +
Sbjct: 172 VKVWFQNRRMKWRHTKESENTALSNSDSQKESSRKLAKDDTKSA 215
>gi|328780908|ref|XP_003249878.1| PREDICTED: hypothetical protein LOC100577110 [Apis mellifera]
Length = 420
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK H
Sbjct: 375 VKVWFQNRRIKWRKHH 390
>gi|195434989|ref|XP_002065484.1| GK14643 [Drosophila willistoni]
gi|194161569|gb|EDW76470.1| GK14643 [Drosophila willistoni]
Length = 230
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 1 MVEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
M VWFQNRR KWRK A + +RK++ E S
Sbjct: 1 MAWVWFQNRRAKWRK--AERLKDEQRKRENGESS 32
>gi|449507151|ref|XP_004176804.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D9
[Taeniopygia guttata]
Length = 328
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
V++WFQNRR KW+K++ + A R++ + E+++E D
Sbjct: 279 VKIWFQNRRMKWKKENNKDKFPASRQEGKEGEAKKEAHD 317
>gi|6136895|dbj|BAA85852.1| Arx homeodomain protein [Mus musculus]
Length = 562
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 373 VQVWFQNRRAKWRKREKAGAQT 394
>gi|344270291|ref|XP_003406979.1| PREDICTED: homeobox protein Hox-A7-like [Loxodonta africana]
Length = 236
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
+++WFQNRR KW+K+H E T
Sbjct: 174 IKIWFQNRRMKWKKEHKDEGPT 195
>gi|195576392|ref|XP_002078060.1| GD23246 [Drosophila simulans]
gi|194190069|gb|EDX03645.1| GD23246 [Drosophila simulans]
Length = 500
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 4 VWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
VWFQNRR KWRK A + +RK++ E S
Sbjct: 12 VWFQNRRAKWRK--AERLKDEQRKRENGESS 40
>gi|26024213|ref|NP_031518.2| homeobox protein ARX [Mus musculus]
gi|27923957|sp|O35085.3|ARX_MOUSE RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|22163970|dbj|BAA28284.2| Arx homeoprotein [Mus musculus]
gi|30354717|gb|AAH52033.1| Aristaless related homeobox [Mus musculus]
Length = 564
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 374 VQVWFQNRRAKWRKREKAGAQT 395
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMA 22
V+VWFQNRR KWR++ E A
Sbjct: 135 VQVWFQNRRAKWRRQEKMEAA 155
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 337 VQVWFQNRRAKWRKREKAGAQT 358
>gi|68144508|gb|AAY86175.1| goosecoid [Heliocidaris erythrogramma]
Length = 321
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
VEVWF+NRR KWRK+ + AKR + + E + D
Sbjct: 195 VEVWFKNRRAKWRKQKREQQEAAKRASEACKTEHEAKTD 233
>gi|403290178|ref|XP_003936207.1| PREDICTED: T-cell leukemia homeobox protein 3 [Saimiri boliviensis
boliviensis]
Length = 291
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 210 VKTWFQNRRTKWRRQ-TAEEREAERQQ 235
>gi|328704025|ref|XP_003242379.1| PREDICTED: homeobox protein pv.1-like [Acyrthosiphon pisum]
Length = 320
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
++ WFQNRRTKW+K+ A+++ A R
Sbjct: 209 IKTWFQNRRTKWKKQLASKLKIAHR 233
>gi|195055983|ref|XP_001994892.1| GH13586 [Drosophila grimshawi]
gi|193892655|gb|EDV91521.1| GH13586 [Drosophila grimshawi]
Length = 106
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 24 VKIWFQNRRNKWKRQLAAEL 43
>gi|158702265|gb|ABW77464.1| homeobox protein HoxB8aa [Salmo salar]
Length = 245
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAE-MATAKRKQDQVEESEEEEE 39
V++WFQNRR KW+K++ + ++K +Q+++E+ + ++E
Sbjct: 189 VKIWFQNRRMKWKKENNKDKFPSSKTEQEEIEKEKRQKE 227
>gi|74096063|ref|NP_001027673.1| transcription factor [Ciona intestinalis]
gi|12274849|emb|CAC22321.1| transcription factor [Ciona intestinalis]
Length = 411
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
+++WFQNRR KW+K AA T K
Sbjct: 307 IKIWFQNRRMKWKKDQAANSKTGK 330
>gi|157109199|ref|XP_001650566.1| t-cell leukemia homeobox protein [Aedes aegypti]
gi|108879082|gb|EAT43307.1| AAEL005250-PA [Aedes aegypti]
Length = 287
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E ++ +++ S + E
Sbjct: 210 VKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAE 246
>gi|15809627|gb|AAK98790.1| T-cell leukemia associated homeodomain protein [Danio rerio]
Length = 301
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 226 VKTWFQNRRTKWRRQTAEEREAERQQANRLMLQLQQE 262
>gi|354465142|ref|XP_003495039.1| PREDICTED: H2.0-like homeobox protein, partial [Cricetulus griseus]
Length = 430
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRR KWR H+ E K K + E
Sbjct: 271 VKVWFQNRRMKWR--HSKEAQAQKDKDKEASE 300
>gi|345797968|ref|XP_003434382.1| PREDICTED: H2.0-like homeobox protein-like [Canis lupus familiaris]
Length = 618
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE---------EEEEDDYRHSDNAAKRL 52
V+VWFQNRR KWR H+ E K K + E E+EE S+ A+
Sbjct: 320 VKVWFQNRRMKWR--HSKEAQAQKDKDKEAGEKPSGGAAAADGEQEERSLSRSEGEAESE 377
Query: 53 RRE 55
R+
Sbjct: 378 SRD 380
>gi|258504634|gb|ACV72954.1| CEH-23 [Caenorhabditis remanei]
Length = 278
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 244 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 277
>gi|190338659|gb|AAI62601.1| Hematopoietically expressed homeobox [Danio rerio]
Length = 228
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 2 VEVWFQNRRTKWRK-KHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRELAA 58
V+ WFQNRR KWR+ K +T KR E E+ D R SD AA+ E A
Sbjct: 161 VKTWFQNRRAKWRRLKQENPPSTGKR--------EAEDSDTRRLSDAAARARELESGA 210
>gi|449506143|ref|XP_002189595.2| PREDICTED: homeobox protein HMX3, partial [Taeniopygia guttata]
Length = 121
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 38 VKIWFQNRRNKWKRQLAAELEAA 60
>gi|14916602|sp|Q9PWD4.1|HXA7_MORSA RecName: Full=Homeobox protein Hox-A7
gi|5669603|gb|AAD46397.1|AF089743_3 homeodomain protein Hox-A7 [Morone saxatilis]
Length = 225
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRL 52
+++WFQNRR KW+K H E + + + E ++ + +N +R
Sbjct: 170 IKIWFQNRRMKWKKDHKEEPVSTPSGEKDCDIQPVSEAEEPKAVNNPERRF 220
>gi|383856108|ref|XP_003703552.1| PREDICTED: uncharacterized protein LOC100881969 [Megachile
rotundata]
Length = 415
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK H
Sbjct: 370 VKVWFQNRRIKWRKHH 385
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMA 22
V+VWFQNRR KWR++ E A
Sbjct: 135 VQVWFQNRRAKWRRQEKMEAA 155
>gi|313234331|emb|CBY10398.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 2 VEVWFQNRRTKWRKKHAAEMA 22
V+VWFQNRR KWR++ +MA
Sbjct: 176 VQVWFQNRRAKWRRQEKVDMA 196
>gi|311275740|ref|XP_003134888.1| PREDICTED: homeobox protein Hox-A7-like [Sus scrofa]
Length = 234
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E A
Sbjct: 174 IKIWFQNRRMKWKKEHKDEGPAA 196
>gi|258504616|gb|ACV72945.1| CEH-23 [Caenorhabditis remanei]
Length = 279
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 245 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 278
>gi|296209387|ref|XP_002751500.1| PREDICTED: homeobox protein Hox-A2 [Callithrix jacchus]
gi|189044222|sp|B0VXK3.1|HXA2_CALJA RecName: Full=Homeobox protein Hox-A2
gi|167427225|gb|ABZ80206.1| homeobox A2 (predicted) [Callithrix jacchus]
Length = 375
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 2 VEVWFQNRRTKW-RKKHAAEMATAKRKQDQVEESEEEEEDD 41
V+VWFQNRR K R+ E ++ K +E+SE+ E+DD
Sbjct: 186 VKVWFQNRRMKHKRQTQCKENQNSEGKCKSLEDSEKVEDDD 226
>gi|18026216|gb|AAL25809.1| antennapedia homeodomain protein [Euprymna scolopes]
Length = 93
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
+++WFQNRR KW+K++ AEM + + Q
Sbjct: 64 IKIWFQNRRMKWKKENKAEMPGTENGKPQ 92
>gi|56694806|gb|AAW23065.1| Rx, partial [Oikopleura dioica]
Length = 156
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V+VWFQNRR KWR++ +MA
Sbjct: 92 VQVWFQNRRAKWRRQEKVDMANP 114
>gi|123320|sp|P10178.1|HMB3_TRIGR RecName: Full=Homeobox protein HB3
gi|1335679|emb|CAA31544.1| unnamed protein product [Tripneustes gratilla]
Length = 108
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
+++WFQNRR KW+++H + T +QDQ+
Sbjct: 71 IKIWFQNRRMKWKREHGSN-CTMTNQQDQM 99
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 265 VQVWFQNRRAKWRKREKA 282
>gi|291222403|ref|XP_002731203.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 379
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 213 VQVWFQNRRAKWRKREKA 230
>gi|432903179|ref|XP_004077122.1| PREDICTED: homeobox protein HMX3-A-like [Oryzias latipes]
Length = 303
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 219 VKIWFQNRRNKWKRQLAAELEAA 241
>gi|3395529|emb|CAA08911.1| homeodomain protein [Mus musculus]
Length = 356
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|295656520|gb|ADG26723.1| ARX homeobox protein [Platynereis dumerilii]
Length = 283
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 243 VQVWFQNRRAKWRKK 257
>gi|157787085|ref|NP_032283.3| homeobox protein HMX3 [Mus musculus]
gi|341941024|sp|P42581.3|HMX3_MOUSE RecName: Full=Homeobox protein HMX3; AltName: Full=Homeobox protein
H6 family member 3; AltName: Full=Homeobox protein
Nkx-5.1
gi|148685770|gb|EDL17717.1| H6 homeobox 3 [Mus musculus]
gi|223460068|gb|AAI39484.1| H6 homeo box 3 [Mus musculus]
gi|223460368|gb|AAI39483.1| H6 homeo box 3 [Mus musculus]
Length = 356
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|355755063|gb|EHH58930.1| Retina and anterior neural fold homeobox protein, partial [Macaca
fascicularis]
Length = 117
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 83 VQVWFQNRRAKWRRQEKLEVSSMK 106
>gi|194853624|ref|XP_001968195.1| GG24636 [Drosophila erecta]
gi|190660062|gb|EDV57254.1| GG24636 [Drosophila erecta]
Length = 478
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
VEVWF+NRR KWRK+ E ++ Q++
Sbjct: 389 VEVWFKNRRAKWRKQKREEQERLRKLQEE 417
>gi|2696705|dbj|BAA24005.1| goosecoid [Cynops pyrrhogaster]
Length = 248
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 VEVWFQNRRTKWR--KKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKR 51
VEVWF+NRR KWR K+ ++E + +K ++ ++ E+ + SD + R
Sbjct: 197 VEVWFKNRRAKWRRQKRSSSEESENTQKWNKTSKTSPEKRQEDVKSDLDSDR 248
>gi|431908252|gb|ELK11852.1| Homeobox protein HMX3 [Pteropus alecto]
Length = 301
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 215 VKIWFQNRRNKWKRQLAAELEAA 237
>gi|7839212|gb|AAF70205.1| H6 homeodomain protein [Homo sapiens]
Length = 373
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW++ AAE+ A
Sbjct: 244 VKIWFQNRRNKWKRHVAAELEAA 266
>gi|301778625|ref|XP_002924730.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Ailuropoda melanoleuca]
Length = 278
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|281344744|gb|EFB20328.1| hypothetical protein PANDA_008744 [Ailuropoda melanoleuca]
Length = 414
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRR KWR H+ E K K + E
Sbjct: 308 VKVWFQNRRMKWR--HSKEAQAQKDKDKEAGE 337
>gi|194041604|ref|XP_001928044.1| PREDICTED: homeobox protein HMX3 [Sus scrofa]
Length = 357
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|154183831|gb|ABS70771.1| Hoxa7a [Haplochromis burtoni]
Length = 224
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
+++WFQNRR KW+K H E + ++ +D SE E
Sbjct: 170 IKIWFQNRRMKWKKDHKDEPSNEEQHRDSQAPSEGRE 206
>gi|440897928|gb|ELR49525.1| T-cell leukemia homeobox protein 3, partial [Bos grunniens mutus]
Length = 294
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+ WFQNRRTKWR++ AE A+R+Q
Sbjct: 213 VKTWFQNRRTKWRRQ-TAEEREAERQQ 238
>gi|82228888|sp|Q504H8.1|HMX3_DANRE RecName: Full=Homeobox protein HMX3; AltName: Full=Homeobox protein
H6 family member 3; AltName: Full=Homeobox protein
Nkx-5.1
gi|63102121|gb|AAH95015.1| Homeo box (H6 family) 3 [Danio rerio]
gi|182891290|gb|AAI64241.1| Hmx3 protein [Danio rerio]
Length = 297
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 214 VKIWFQNRRNKWKRQLAAELEAA 236
>gi|444741711|ref|NP_001263283.1| homeobox protein DBX2 [Gallus gallus]
Length = 311
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
V++WFQNRR KWR E+ + + Q+ ++E+
Sbjct: 208 VKIWFQNRRMKWRNSKEKEVLSNRCLQEGLQEN 240
>gi|348588233|ref|XP_003479871.1| PREDICTED: homeobox protein HMX3-like [Cavia porcellus]
Length = 357
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|332017817|gb|EGI58478.1| Homeobox protein ARX [Acromyrmex echinatior]
Length = 248
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 2 VEVWFQNRRTKWRKKHA-AEMATAKRKQDQVEESEEEEEDDYRHSDN 47
V+VWFQNRR KWRK+ ++AT +E ++ +HSD+
Sbjct: 140 VQVWFQNRRAKWRKQEKQCKIATHMTSSHLPPNCQEVQQHQSQHSDH 186
>gi|443709131|gb|ELU03930.1| hypothetical protein CAPTEDRAFT_173096 [Capitella teleta]
Length = 217
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KW++ +MA K
Sbjct: 163 VKVWFQNRRMKWKRTKGTQMAKDK 186
>gi|393911231|gb|EJD76222.1| hypothetical protein LOAG_16789 [Loa loa]
Length = 242
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWR++ AE
Sbjct: 116 VQVWFQNRRAKWRRQDKAE 134
>gi|350425166|ref|XP_003494033.1| PREDICTED: T-cell leukemia homeobox protein 3-like [Bombus
impatiens]
Length = 197
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E ++ +++ S + E
Sbjct: 107 VKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAE 143
>gi|258504614|gb|ACV72944.1| CEH-23 [Caenorhabditis remanei]
Length = 276
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 242 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 275
>gi|348544422|ref|XP_003459680.1| PREDICTED: homeobox protein goosecoid-like [Oreochromis niloticus]
Length = 241
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 10/50 (20%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ----------DQVEESEEEEEDD 41
VEVWF+NRR KWR++ + ++ Q D+ EES+ E + D
Sbjct: 191 VEVWFKNRRAKWRRQKRSSSEESENSQKWNKSNKTSADKPEESKSEVDSD 240
>gi|195175466|ref|XP_002028472.1| GL17563 [Drosophila persimilis]
gi|198462201|ref|XP_002135664.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
gi|194103225|gb|EDW25268.1| GL17563 [Drosophila persimilis]
gi|198139762|gb|EDY70832.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
Length = 546
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
++VWF NRR KWR++ +M T +R D V
Sbjct: 307 IQVWFSNRRAKWRREE--KMRTQRRSADNV 334
>gi|351699331|gb|EHB02250.1| Retinal homeobox protein Rx, partial [Heterocephalus glaber]
Length = 211
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMK 203
>gi|301629916|ref|XP_002944078.1| PREDICTED: t-cell leukemia homeobox protein 3-like [Xenopus
(Silurana) tropicalis]
Length = 259
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRE-LAAH- 59
V+ WFQNRRTKWR++ AE A+R+Q + ++E + ++ L R+ L AH
Sbjct: 185 VKTWFQNRRTKWRRQ-TAEDREAERQQTSRMMLQLQQEA---YQKTVSQTLPRDPLCAHN 240
Query: 60 ---CGVQNM 65
C +QN+
Sbjct: 241 SSLCALQNL 249
>gi|291233545|ref|XP_002736712.1| PREDICTED: visual system homeobox 2-like [Saccoglossus kowalevskii]
Length = 361
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
++VWFQNRR KWRKK
Sbjct: 200 IQVWFQNRRAKWRKK 214
>gi|242025100|ref|XP_002432964.1| Homeobox protein ceh-19, putative [Pediculus humanus corporis]
gi|212518473|gb|EEB20226.1| Homeobox protein ceh-19, putative [Pediculus humanus corporis]
Length = 141
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
++ WFQNRRTKW+K+ + + A+R
Sbjct: 66 IKTWFQNRRTKWKKQLTSRLKIAQR 90
>gi|1616751|gb|AAC52830.1| homeodomain protein Uncx-4.1 [Mus musculus]
Length = 196
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 45 VQVWFQNRRAKWRKK 59
>gi|440899267|gb|ELR50596.1| Homeobox protein Hox-A7, partial [Bos grunniens mutus]
Length = 237
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E A
Sbjct: 174 IKIWFQNRRMKWKKEHKEESPAA 196
>gi|391345791|ref|XP_003747166.1| PREDICTED: homeobox protein aristaless-like [Metaseiulus
occidentalis]
Length = 317
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 98 VQVWFQNRRAKWRKQEKA 115
>gi|297687559|ref|XP_002821279.1| PREDICTED: homeobox protein HMX3 [Pongo abelii]
Length = 357
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|194666358|ref|XP_872865.2| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|297473885|ref|XP_002686901.1| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|296488412|tpg|DAA30525.1| TPA: homeobox A7-like [Bos taurus]
Length = 238
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E A
Sbjct: 174 IKIWFQNRRMKWKKEHKEESPAA 196
>gi|47220084|emb|CAG12232.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 143 VQVWFQNRRAKWRKK 157
>gi|390465901|ref|XP_003733484.1| PREDICTED: LOW QUALITY PROTEIN: diencephalon/mesencephalon homeobox
protein 1 [Callithrix jacchus]
Length = 508
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEE 37
V+VWF+NRR K+RKK + +KQ + E S E
Sbjct: 240 VQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGSHGE 275
>gi|351699504|gb|EHB02423.1| Homeobox protein ARX [Heterocephalus glaber]
Length = 195
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRK+
Sbjct: 76 VQVWFQNRRAKWRKR 90
>gi|332212002|ref|XP_003255107.1| PREDICTED: homeobox protein HMX3 [Nomascus leucogenys]
Length = 357
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|332029039|gb|EGI69053.1| Homeobox protein not2 [Acromyrmex echinatior]
Length = 422
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK H
Sbjct: 377 VKVWFQNRRIKWRKLH 392
>gi|307179814|gb|EFN68001.1| Homeobox protein not2 [Camponotus floridanus]
Length = 424
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK H
Sbjct: 379 VKVWFQNRRIKWRKLH 394
>gi|291230020|ref|XP_002734968.1| PREDICTED: Unc4.1 homeobox-like [Saccoglossus kowalevskii]
Length = 442
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 141 VQVWFQNRRAKWRKK 155
>gi|82245462|sp|Q90XP0.1|HMX3A_ORYLA RecName: Full=Homeobox protein HMX3-A; AltName: Full=Homeobox
protein H6 family member 3-A; AltName: Full=Homeobox
protein Nkx-5.1.1; AltName: Full=OlNkx-5.1.1
gi|15637259|gb|AAL04484.1|AF365970_1 transcription factor Nkx5-1.1 [Oryzias latipes]
Length = 303
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 219 VKIWFQNRRNKWKRQLAAELEAA 241
>gi|258504636|gb|ACV72955.1| CEH-23 [Caenorhabditis remanei]
Length = 279
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 245 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 278
>gi|260809474|ref|XP_002599530.1| hypothetical protein BRAFLDRAFT_77633 [Branchiostoma floridae]
gi|229284810|gb|EEN55542.1| hypothetical protein BRAFLDRAFT_77633 [Branchiostoma floridae]
Length = 165
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 1 MVEVWFQNRRTKWRKK 16
+ +VWFQNRR KWRKK
Sbjct: 25 LTQVWFQNRRAKWRKK 40
>gi|113681718|ref|NP_001038589.1| homeobox protein MOX-2-like [Danio rerio]
gi|94733295|emb|CAK04930.1| novel protein similar to vertebrate mesenchyme homeo box 2 (growth
arrest-specific homeo box) (MEOX2) [Danio rerio]
Length = 289
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KW++ + A R+++ V
Sbjct: 217 VKVWFQNRRMKWKRVKGGQQGAAAREKELV 246
>gi|18858815|ref|NP_571709.1| homeobox protein HMX3 [Danio rerio]
gi|10444257|gb|AAG17822.1|AF288211_1 Nkx5-1 [Danio rerio]
Length = 297
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 214 VKIWFQNRRNKWKRQLAAELEAA 236
>gi|332212022|ref|XP_003255121.1| PREDICTED: LOW QUALITY PROTEIN: hematopoietically-expressed
homeobox protein HHEX, partial [Nomascus leucogenys]
Length = 264
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
V+ WFQNRR KWR+ + K++ + ++ S ++ +D
Sbjct: 176 VKTWFQNRRAKWRRLKQENPQSNKKELESLDSSCDQRQD 214
>gi|258504632|gb|ACV72953.1| CEH-23 [Caenorhabditis remanei]
Length = 277
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 243 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 276
>gi|258504606|gb|ACV72940.1| CEH-23 [Caenorhabditis remanei]
gi|258504612|gb|ACV72943.1| CEH-23 [Caenorhabditis remanei]
gi|258504618|gb|ACV72946.1| CEH-23 [Caenorhabditis remanei]
gi|258504630|gb|ACV72952.1| CEH-23 [Caenorhabditis remanei]
Length = 278
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 244 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 277
>gi|195490631|ref|XP_002093220.1| GE21201 [Drosophila yakuba]
gi|194179321|gb|EDW92932.1| GE21201 [Drosophila yakuba]
Length = 566
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRR KWR E+ + +DQ
Sbjct: 293 VKIWFQNRRMKWRNSKERELLASGGSRDQ 321
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 188 VQVWFQNRRAKWRKREKAGAQT 209
>gi|194770706|ref|XP_001967430.1| GF21877 [Drosophila ananassae]
gi|190618406|gb|EDV33930.1| GF21877 [Drosophila ananassae]
Length = 545
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
++VWF NRR KWR++ +M T +R D + S
Sbjct: 309 IQVWFSNRRAKWRREE--KMRTQRRSVDNIGNS 339
>gi|433709|gb|AAA17047.1| homeobox protein [Gallus gallus]
Length = 368
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW++ AA++ A
Sbjct: 242 VKIWFQNRRNKWKRHVAADLEAA 264
>gi|444732546|gb|ELW72836.1| Retinal homeobox protein Rx [Tupaia chinensis]
Length = 286
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+++ K
Sbjct: 179 VQVWFQNRRAKWRRQEKLEVSSMK 202
>gi|359080253|ref|XP_003587958.1| PREDICTED: homeobox protein HMX3-like [Bos taurus]
Length = 359
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 273 VKIWFQNRRNKWKRQLAAELEAA 295
>gi|387915092|gb|AFK11155.1| homeobox protein HoxD8 [Callorhinchus milii]
Length = 238
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAK 50
V++WFQNRR KW+K++ + R +++ +E EE + ++N K
Sbjct: 190 VKIWFQNRRMKWKKENNKDKFPTSRNEEEEGVKKELEETEQEATENDTK 238
>gi|321474068|gb|EFX85034.1| reversed polarity homeodomain-like protein [Daphnia pulex]
Length = 331
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRK+
Sbjct: 146 VQVWFQNRRAKWRKR 160
>gi|206600987|gb|ACI16356.1| homeodomain protein [Branchiostoma floridae]
Length = 259
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 171 VKTWFQNRRTKWRRQTAEEREAERQQANRM 200
>gi|259013476|ref|NP_001158481.1| dorsal root ganglia homeobox [Saccoglossus kowalevskii]
gi|197734655|gb|ACH73223.1| dorsal root ganglion homeobox protein [Saccoglossus kowalevskii]
Length = 328
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 7/36 (19%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEE 37
V+VWFQNRR KWRK T K + D+ +SE +
Sbjct: 100 VQVWFQNRRAKWRK-------TEKGRPDETRDSEND 128
>gi|195470314|ref|XP_002087453.1| GE15985 [Drosophila yakuba]
gi|194173554|gb|EDW87165.1| GE15985 [Drosophila yakuba]
Length = 528
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
VEVWF+NRR KWRK+ E ++ Q++
Sbjct: 439 VEVWFKNRRAKWRKQKREEQERLRKLQEE 467
>gi|126273319|ref|XP_001376242.1| PREDICTED: homeobox protein HMX3-like [Monodelphis domestica]
Length = 358
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 274 VKIWFQNRRNKWKRQLAAELEAA 296
>gi|405951906|gb|EKC19775.1| Dorsal root ganglia homeobox protein [Crassostrea gigas]
Length = 492
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 2 VEVWFQNRRTKWRK--KHAAEMATAKRKQDQVEESEEEEEDD 41
V+VWFQNRR KWRK + + + Q+ V E E E D
Sbjct: 142 VQVWFQNRRAKWRKSERFTQQSKSGAPGQNDVTEDELLSEGD 183
>gi|341896343|gb|EGT52278.1| CBN-CEH-43 protein [Caenorhabditis brenneri]
Length = 277
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDN 47
V++WFQNRR+K +K A T+ R D+ +++EE + + SD+
Sbjct: 141 VKIWFQNRRSK--QKKAKSGGTSDRASDEDDDTEESKPESSPMSDS 184
>gi|322778895|gb|EFZ09311.1| hypothetical protein SINV_14484 [Solenopsis invicta]
Length = 303
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 3 EVWFQNRRTKWRKKHAAEMATAKRKQ 28
+VWFQNRR KWRK + KR++
Sbjct: 8 QVWFQNRRAKWRKSERLKEEQRKREE 33
>gi|148234492|ref|NP_001082538.1| homeobox protein Hox-A7 [Xenopus laevis]
gi|123281|sp|P09071.1|HXA7_XENLA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Xhox-36;
AltName: Full=XlHbox-3
gi|537600|gb|AAA49753.1| homeobox protein [Xenopus laevis]
gi|213626867|gb|AAI70290.1| Homeobox protein [Xenopus laevis]
gi|213626991|gb|AAI70546.1| Homeobox protein [Xenopus laevis]
Length = 209
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 7/36 (19%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEE 37
+++WFQNRR KW+K+H K + DQ ++ EE
Sbjct: 166 IKIWFQNRRMKWKKEH-------KEESDQTPDAGEE 194
>gi|348511747|ref|XP_003443405.1| PREDICTED: T-cell leukemia homeobox protein 1-like [Oreochromis
niloticus]
Length = 315
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E +++ +++ ++E
Sbjct: 240 VKTWFQNRRTKWRRQTAEEREAERQQANRLMLQLQQE 276
>gi|18858811|ref|NP_571009.1| hematopoietically-expressed homeobox protein hhex [Danio rerio]
gi|82247679|sp|Q9IAV3.1|HHEX_DANRE RecName: Full=Hematopoietically-expressed homeobox protein hhex;
Short=Homeobox protein hex
gi|6782423|gb|AAF28383.1| hematopoietically expressed homeobox protein Hhex [Danio rerio]
Length = 228
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 2 VEVWFQNRRTKWRK-KHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRELAA 58
V+ WFQNRR KWR+ K +T KR E E+ D R SD AA+ E A
Sbjct: 161 VKTWFQNRRAKWRRLKQENPPSTGKR--------EAEDSDTRRLSDAAARARELESGA 210
>gi|258504624|gb|ACV72949.1| CEH-23 [Caenorhabditis remanei]
Length = 278
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 244 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 277
>gi|258504608|gb|ACV72941.1| CEH-23 [Caenorhabditis remanei]
gi|258504610|gb|ACV72942.1| CEH-23 [Caenorhabditis remanei]
Length = 278
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 244 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 277
>gi|170064593|ref|XP_001867588.1| tankyrase [Culex quinquefasciatus]
gi|167881937|gb|EDS45320.1| tankyrase [Culex quinquefasciatus]
Length = 1164
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 2 VEVWFQNRRTKWRKKH 17
V+VWFQNRR KWRK H
Sbjct: 395 VKVWFQNRRIKWRKHH 410
>gi|22506663|gb|AAM97595.1|AF293667_1 DNA-binding protein HOX6, partial [Holopneustes purpurascens]
Length = 41
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVE 32
+++WFQNRR KW+++H A + +QDQ+
Sbjct: 4 IKIWFQNRRMKWKREHGAN-CSMTNQQDQMP 33
>gi|383861926|ref|XP_003706435.1| PREDICTED: retinal homeobox protein Rx2-like [Megachile rotundata]
Length = 296
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRKK A
Sbjct: 112 VQVWFQNRRAKWRKKEKA 129
>gi|221330585|ref|NP_001137762.1| goosecoid, isoform B [Drosophila melanogaster]
gi|220901896|gb|ACL82969.1| goosecoid, isoform B [Drosophila melanogaster]
Length = 485
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
VEVWF+NRR KWRK+ E ++ Q++
Sbjct: 396 VEVWFKNRRAKWRKQKREEQERLRKLQEE 424
>gi|11932960|emb|CAC19336.1| homeobox transcription factor [Platynereis dumerilii]
Length = 279
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 23/69 (33%)
Query: 2 VEVWFQNRRTKWRKK-----------------------HAAEMATAKRKQDQVEESEEEE 38
VEVWF+NRR KWRK+ ++ E ++ K D S+ EE
Sbjct: 146 VEVWFKNRRAKWRKQKREEEARRRAAGTSDGASSSTVSNSPETSSDKSPHDDKSNSDVEE 205
Query: 39 EDDYRHSDN 47
ED H D
Sbjct: 206 EDRLSHVDG 214
>gi|47199053|emb|CAF88397.1| unnamed protein product [Tetraodon nigroviridis]
Length = 71
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 46 VKIWFQNRRNKWKRQLAAELEAA 68
>gi|410914461|ref|XP_003970706.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Takifugu
rubripes]
Length = 285
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 2 VEVWFQNRRTKWRKKH---AAEMATAKRKQDQVEESEEEEEDDYRHSD 46
V+VWFQNRR K+RK+ AA A AK + +S +E+ D + +D
Sbjct: 142 VQVWFQNRRAKFRKQERAAAAAAAAAKSNSGKKSDSRDEDSKDAKSAD 189
>gi|348514409|ref|XP_003444733.1| PREDICTED: T-cell leukemia homeobox protein 3-like [Oreochromis
niloticus]
Length = 282
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 210 VKTWFQNRRTKWRRQTAEEREAERQQANRL 239
>gi|345482144|ref|XP_001603519.2| PREDICTED: hypothetical protein LOC100119801 [Nasonia vitripennis]
Length = 461
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
V+VWFQNRR KWRK + KR+ +S
Sbjct: 140 VQVWFQNRRAKWRKSQRLKEEQRKREGSASADS 172
>gi|334332991|ref|XP_001378522.2| PREDICTED: homeobox protein unc-4 homolog [Monodelphis domestica]
Length = 471
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
+EVWFQNRR KWRKK
Sbjct: 41 IEVWFQNRRAKWRKK 55
>gi|308220108|gb|ADO22626.1| PRD class homeobox transcription factor PRD44 [Mnemiopsis leidyi]
Length = 579
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 2 VEVWFQNRRTKWRKKH-AAEMATA 24
V+VWFQNRR KWRKK A+M+ A
Sbjct: 140 VQVWFQNRRAKWRKKQREADMSNA 163
>gi|258504622|gb|ACV72948.1| CEH-23 [Caenorhabditis remanei]
Length = 278
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 244 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 277
>gi|195055953|ref|XP_001994877.1| GH13706 [Drosophila grimshawi]
gi|193892640|gb|EDV91506.1| GH13706 [Drosophila grimshawi]
Length = 752
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 15/15 (100%)
Query: 2 VEVWFQNRRTKWRKK 16
V++WFQNRRTKW+K+
Sbjct: 448 VKIWFQNRRTKWKKQ 462
>gi|157743259|ref|NP_001099044.1| homeobox protein HMX3 [Homo sapiens]
gi|190359524|sp|A6NHT5.1|HMX3_HUMAN RecName: Full=Homeobox protein HMX3; AltName: Full=Homeobox protein
H6 family member 3; AltName: Full=Homeobox protein
Nkx-5.1
gi|119569674|gb|EAW49289.1| hCG1781691 [Homo sapiens]
Length = 357
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|432878320|ref|XP_004073299.1| PREDICTED: T-cell leukemia homeobox protein 3-like [Oryzias
latipes]
Length = 282
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 210 VKTWFQNRRTKWRRQTAEEREAERQQANRL 239
>gi|167900486|ref|NP_001108138.1| aristaless related homeobox [Canis lupus familiaris]
Length = 574
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 384 VQVWFQNRRAKWRKREKAGAQT 405
>gi|410908863|ref|XP_003967910.1| PREDICTED: aristaless-related homeobox protein-like [Takifugu
rubripes]
Length = 463
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 265 VQVWFQNRRAKWRKREKA 282
>gi|260826474|ref|XP_002608190.1| retinal homeobox protein-like protein [Branchiostoma floridae]
gi|229293541|gb|EEN64200.1| retinal homeobox protein-like protein [Branchiostoma floridae]
Length = 268
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Query: 2 VEVWFQNRRTKWRK--KHAAEMA 22
V+VWFQNRR KWRK KH +M
Sbjct: 156 VQVWFQNRRAKWRKREKHLHDMG 178
>gi|6016289|sp|O55144.1|TLX3_MOUSE RecName: Full=T-cell leukemia homeobox protein 3; AltName:
Full=Homeobox TLX-3; AltName: Full=Homeobox protein
Hox-11L2; AltName: Full=Respiratory neuron homeobox
protein
gi|2959932|emb|CAA11551.1| HOX11L2 [Mus musculus]
Length = 291
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+ WFQNRRTKWR++ A E
Sbjct: 210 VKTWFQNRRTKWRRQTAEE 228
>gi|402881721|ref|XP_003904413.1| PREDICTED: homeobox protein HMX3 [Papio anubis]
Length = 357
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|340722398|ref|XP_003399593.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX-like
[Bombus terrestris]
Length = 271
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRL 52
V++WFQNRR KWR E+ ++Q ++ D +D R+
Sbjct: 192 VKIWFQNRRMKWRNSKERELLATGGSREQTLPNKNNPNPDLSDADGDRPRM 242
>gi|307192280|gb|EFN75567.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 299
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRKK A
Sbjct: 112 VQVWFQNRRAKWRKKEKA 129
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 266 VQVWFQNRRAKWRKREKA 283
>gi|157987313|gb|ABW07818.1| homeobox transcription factor [Danio rerio]
Length = 297
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 214 VKIWFQNRRNKWKRQLAAELEAA 236
>gi|332026923|gb|EGI67024.1| Dorsal root ganglia homeobox protein [Acromyrmex echinatior]
Length = 292
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+VWFQNRR KWRK + KR+
Sbjct: 10 VQVWFQNRRAKWRKSERLKEEQRKRE 35
>gi|258504628|gb|ACV72951.1| CEH-23 [Caenorhabditis remanei]
Length = 278
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 244 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 277
>gi|258504620|gb|ACV72947.1| CEH-23 [Caenorhabditis remanei]
Length = 276
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE 35
V +WFQNRR+K R+K E + ++EE E
Sbjct: 242 VRIWFQNRRSKHRRKQQEEQLSTPPMDKEIEEKE 275
>gi|340709254|ref|XP_003393226.1| PREDICTED: hypothetical protein LOC100648311 [Bombus terrestris]
Length = 407
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEE 38
V+ WFQNRRTKWR++ A E ++ +++ S + E
Sbjct: 317 VKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAE 353
>gi|60172784|gb|AAX14497.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEE 36
+++WFQNRR KW+K H +Q+E +E+
Sbjct: 620 IKIWFQNRRMKWKKDHNIAKLNGPGTLEQLELAEQ 654
>gi|256070808|ref|XP_002571734.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEE 36
+++WFQNRR KW+K H +Q+E +E+
Sbjct: 620 IKIWFQNRRMKWKKDHNIAKLNGPGTLEQLELAEQ 654
>gi|126326347|ref|XP_001368563.1| PREDICTED: homeobox protein Hox-D8-like [Monodelphis domestica]
Length = 307
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
V++WFQNRR KW+K++ + R++ + E+++E D
Sbjct: 258 VKIWFQNRRMKWKKENNKDKFPVSRQEGKEGETKKEAHD 296
>gi|114107920|gb|AAI23278.1| LOC397703 protein [Xenopus laevis]
Length = 214
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+VWFQNRR KWRK+ + E AK Q
Sbjct: 160 VKVWFQNRRIKWRKQ-SLEQKKAKLSQ 185
>gi|410901024|ref|XP_003963996.1| PREDICTED: homeobox protein HMX3-A-like [Takifugu rubripes]
Length = 301
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 217 VKIWFQNRRNKWKRQLAAELEAA 239
>gi|359754088|gb|AEV59511.1| HOXA7 [Macropus eugenii]
Length = 227
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E + A
Sbjct: 173 IKIWFQNRRMKWKKEHKDEGSAA 195
>gi|348522887|ref|XP_003448955.1| PREDICTED: homeobox protein Hox-A4 [Oreochromis niloticus]
Length = 305
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 2 VEVWFQNRRTKWRKKH 17
V++WFQNRR KW+K+H
Sbjct: 249 VKIWFQNRRMKWKKEH 264
>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
niloticus]
Length = 355
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + +T K
Sbjct: 187 VQVWFQNRRAKWRRQEKMDASTMK 210
>gi|344296456|ref|XP_003419923.1| PREDICTED: H2.0-like homeobox protein-like [Loxodonta africana]
Length = 768
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRR KWR H+ E K K + E
Sbjct: 321 VKVWFQNRRMKWR--HSKEAQAQKDKDKEAAE 350
>gi|405971668|gb|EKC36493.1| Homeobox protein HMX3-B [Crassostrea gigas]
Length = 316
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V++WFQNRR KW+++ AAE+ A Q
Sbjct: 233 VKIWFQNRRNKWKRQLAAELEAANMSQ 259
>gi|332019565|gb|EGI60044.1| BarH-like 1 homeobox protein [Acromyrmex echinatior]
Length = 341
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
+++WFQNRRTKW++K+ ++
Sbjct: 227 IKIWFQNRRTKWKRKYTNDV 246
>gi|339253634|ref|XP_003372040.1| retinal homeobox protein Rax [Trichinella spiralis]
gi|316967607|gb|EFV52015.1| retinal homeobox protein Rax [Trichinella spiralis]
Length = 266
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V+VWFQNRR KWR++ E+
Sbjct: 126 VQVWFQNRRAKWRRQEKMEL 145
>gi|91086979|ref|XP_973468.1| PREDICTED: similar to Retinal homeobox protein Rx (DRx1) (DRx)
[Tribolium castaneum]
gi|270011078|gb|EFA07526.1| retinal homeobox [Tribolium castaneum]
Length = 278
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMA 22
V+VWFQNRR KWR++ E A
Sbjct: 154 VQVWFQNRRAKWRRQEKMEAA 174
>gi|385654457|gb|AFI61961.1| Hox-A7a, partial [Anguilla japonica]
Length = 102
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ-VEESEEEEE 39
+++WFQNRR KW+K H A+ D V S +E+E
Sbjct: 43 IKIWFQNRRMKWKKDHKADGPGPGSGPDSAVAASADEKE 81
>gi|296221408|ref|XP_002756719.1| PREDICTED: homeobox protein HMX3 [Callithrix jacchus]
Length = 360
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 274 VKIWFQNRRNKWKRQLAAELEAA 296
>gi|270010993|gb|EFA07441.1| homeobrain [Tribolium castaneum]
Length = 261
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 108 VQVWFQNRRAKWRKREKA 125
>gi|297680952|ref|XP_002818233.1| PREDICTED: homeobox protein MOX-2 [Pongo abelii]
Length = 303
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KW++ + A R+++ V
Sbjct: 230 VKVWFQNRRMKWKRVKGGQQGAAAREKELV 259
>gi|431920376|gb|ELK18408.1| T-cell leukemia homeobox protein 2 [Pteropus alecto]
Length = 284
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+ WFQNRRTKWR++ A E + +
Sbjct: 201 VKTWFQNRRTKWRRQTAEEREAERHR 226
>gi|4138292|emb|CAA07775.1| Rx2 protein [Oryzias latipes]
Length = 188
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + +T K
Sbjct: 54 VQVWFQNRRAKWRRQEKMDTSTMK 77
>gi|359754119|gb|AEV59539.1| HOXD8 [Macropus eugenii]
Length = 308
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
V++WFQNRR KW+K++ + R++ + E+++E D
Sbjct: 259 VKIWFQNRRMKWKKENNKDKFPVSRQEGKEGETKKEAHD 297
>gi|301764050|ref|XP_002917451.1| PREDICTED: homeobox protein MOX-2-like [Ailuropoda melanoleuca]
gi|281349192|gb|EFB24776.1| hypothetical protein PANDA_005667 [Ailuropoda melanoleuca]
Length = 303
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KW++ + A R+++ V
Sbjct: 230 VKVWFQNRRMKWKRVKGGQQGAAAREKELV 259
>gi|449501589|ref|XP_002188548.2| PREDICTED: homeobox protein not2-like [Taeniopygia guttata]
Length = 201
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 9/48 (18%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV--------EESEEEEEDD 41
V+VWFQNRR KWRK+ + E AK Q V +S+E EED
Sbjct: 150 VKVWFQNRRIKWRKQ-SMEQKAAKLSQFGVIQPASADSTDSKEHEEDP 196
>gi|354467832|ref|XP_003496372.1| PREDICTED: homeobox protein unc-4 homolog [Cricetulus griseus]
Length = 151
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 26 VQVWFQNRRAKWRKK 40
>gi|297302006|ref|XP_002808561.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein HMX3-like [Macaca
mulatta]
Length = 357
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|291386484|ref|XP_002709761.1| PREDICTED: T-cell leukemia, homeobox 2-like [Oryctolagus cuniculus]
Length = 284
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+ WFQNRRTKWR++ A E + +
Sbjct: 201 VKTWFQNRRTKWRRQTAEEREAERHR 226
>gi|47215667|emb|CAG04751.1| unnamed protein product [Tetraodon nigroviridis]
Length = 282
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 211 VKTWFQNRRTKWRRQTAEEREAERQQANRL 240
>gi|301769289|ref|XP_002920063.1| PREDICTED: h2.0-like homeobox protein-like [Ailuropoda melanoleuca]
Length = 607
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V+VWFQNRR KWR H+ E K K + E
Sbjct: 317 VKVWFQNRRMKWR--HSKEAQAQKDKDKEAGE 346
>gi|212288009|gb|ABI34245.3| RT01146p [Drosophila melanogaster]
Length = 424
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
VEVWF+NRR KWRK+ E ++ Q++
Sbjct: 335 VEVWFKNRRAKWRKQKREEQERLRKLQEE 363
>gi|1518214|emb|CAB01921.1| COS2.2 [Ciona intestinalis]
Length = 162
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 2 VEVWFQNRRTKWRKK-------HAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRL 52
VEVWF+NRR KWRK+ A ++ D S E ED +D AA L
Sbjct: 93 VEVWFKNRRAKWRKQKRERELMKAETGSSGSAASDHPPSSPERYEDMNDKADFAAATL 150
>gi|14916585|sp|Q9IA12.1|HXD8_HETFR RecName: Full=Homeobox protein Hox-D8
gi|7271820|gb|AAF44632.1|AF224263_2 HoxD8 [Heterodontus francisci]
Length = 240
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEE 33
V++WFQNRR KW+K++ + R D+ EE
Sbjct: 191 VKIWFQNRRMKWKKENNKDKFPTSRNDDEDEE 222
>gi|170576749|ref|XP_001893749.1| Homeobox domain containing protein [Brugia malayi]
gi|158600048|gb|EDP37405.1| Homeobox domain containing protein [Brugia malayi]
Length = 224
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWR++ AE
Sbjct: 94 VQVWFQNRRAKWRRQDKAE 112
>gi|344270626|ref|XP_003407145.1| PREDICTED: homeobox protein MOX-2-like [Loxodonta africana]
Length = 303
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KW++ + A R+++ V
Sbjct: 230 VKVWFQNRRMKWKRVKGGQQGAAAREKELV 259
>gi|332835226|ref|XP_508090.3| PREDICTED: homeobox protein HMX3 [Pan troglodytes]
Length = 357
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|313212674|emb|CBY36614.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 2 VEVWFQNRRTKWRKKHAAEMA 22
V+VWFQNRR KWR++ +MA
Sbjct: 97 VQVWFQNRRAKWRRQEKVDMA 117
>gi|311252341|ref|XP_003125043.1| PREDICTED: T-cell leukemia homeobox protein 2-like [Sus scrofa]
Length = 284
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+ WFQNRRTKWR++ A E + +
Sbjct: 201 VKTWFQNRRTKWRRQTAEEREAERHR 226
>gi|291223907|ref|XP_002731951.1| PREDICTED: H6 homeobox 1-like [Saccoglossus kowalevskii]
Length = 306
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 225 VKIWFQNRRNKWKRQLAAELEAA 247
>gi|260828229|ref|XP_002609066.1| T-cell leukemia homeobox protein [Branchiostoma floridae]
gi|229294420|gb|EEN65076.1| T-cell leukemia homeobox protein [Branchiostoma floridae]
Length = 255
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 167 VKTWFQNRRTKWRRQTAEEREAERQQANRM 196
>gi|4206755|gb|AAD11792.1| homeobox protein, partial [Oryctolagus cuniculus]
Length = 138
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEED 40
V+ WFQNRR KWR+ + K++Q+ ++ S E+ D
Sbjct: 61 VKTWFQNRRAKWRRLKQENPQSGKKEQENLDSSCEQRPD 99
>gi|2959928|emb|CAA11550.1| HOX11L2 [Homo sapiens]
Length = 291
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+ WFQNRRTKWR++ A E
Sbjct: 210 VKTWFQNRRTKWRRQTAEE 228
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESE---EEEEDDYRHS 45
V+VWFQNRR K+RK+ A A ++ E E+DD + S
Sbjct: 134 VQVWFQNRRAKFRKQERAASAKGAAGTTGAKKGEARCSSEDDDSKES 180
>gi|17136854|ref|NP_476949.1| goosecoid, isoform A [Drosophila melanogaster]
gi|7296181|gb|AAF51473.1| goosecoid, isoform A [Drosophila melanogaster]
gi|115646581|gb|ABI34211.2| RT01046p [Drosophila melanogaster]
gi|208879498|gb|ACI31294.1| IP21556p [Drosophila melanogaster]
Length = 419
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
VEVWF+NRR KWRK+ E ++ Q++
Sbjct: 330 VEVWFKNRRAKWRKQKREEQERLRKLQEE 358
>gi|328711031|ref|XP_001947663.2| PREDICTED: hypothetical protein LOC100159095 [Acyrthosiphon pisum]
Length = 578
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 2 VEVWFQNRRTKWRKK 16
V VWFQNRR KWRKK
Sbjct: 273 VAVWFQNRRAKWRKK 287
>gi|213511224|ref|NP_001134824.1| H2.0-like homeobox protein [Salmo salar]
gi|209736372|gb|ACI69055.1| H2.0-like homeobox protein [Salmo salar]
Length = 318
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V+VWFQNRR KWR A+ K K+
Sbjct: 214 VKVWFQNRRMKWRHSKEAQAQKDKEKE 240
>gi|195336772|ref|XP_002035007.1| GM14459 [Drosophila sechellia]
gi|194128100|gb|EDW50143.1| GM14459 [Drosophila sechellia]
Length = 554
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRR KWR E+ + +DQ
Sbjct: 290 VKIWFQNRRMKWRNSKERELLASGGSRDQ 318
>gi|156386935|ref|XP_001634166.1| predicted protein [Nematostella vectensis]
gi|156221246|gb|EDO42103.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 64 VQVWFQNRRAKWRKREKA 81
>gi|431922297|gb|ELK19388.1| Retina and anterior neural fold homeobox protein 2 [Pteropus
alecto]
Length = 184
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 11/73 (15%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEE-----------EEEDDYRHSDNAAK 50
V+VWFQNRR KWR++ E + ++ E+ E A
Sbjct: 71 VQVWFQNRRAKWRRQERLESGSGAMSAPRLPEAPALPFARPPAMPLPLEPWLGPGPPAVP 130
Query: 51 RLRRELAAHCGVQ 63
L R L G+Q
Sbjct: 131 ALPRLLGPGPGLQ 143
>gi|56714077|gb|AAW24009.1| homeodomain protein Not-d [Oikopleura dioica]
Length = 157
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKR 26
V+VWFQNRR K+RK A E +T +R
Sbjct: 125 VKVWFQNRRIKFRKSSAQENSTEER 149
>gi|47230777|emb|CAF99970.1| unnamed protein product [Tetraodon nigroviridis]
Length = 293
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDD 41
V++WFQNRR KWR E+ ++ ++Q ++ D
Sbjct: 218 VKIWFQNRRMKWRNSKERELLSSGGCREQTLPTKANPHPD 257
>gi|410912375|ref|XP_003969665.1| PREDICTED: homeobox protein DBX1-A-like [Takifugu rubripes]
Length = 312
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDD 41
V++WFQNRR KWR E+ ++ ++Q ++ D
Sbjct: 218 VKIWFQNRRMKWRNSKERELLSSGGCREQTLPTKANPHPD 257
>gi|354479669|ref|XP_003502032.1| PREDICTED: homeobox protein Hox-A7-like [Cricetulus griseus]
Length = 233
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
+++WFQNRR KW+K+H E
Sbjct: 176 IKIWFQNRRMKWKKEHKDE 194
>gi|194855671|ref|XP_001968592.1| GG24957 [Drosophila erecta]
gi|190660459|gb|EDV57651.1| GG24957 [Drosophila erecta]
Length = 309
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 3 EVWFQNRRTKWRKKHAAEMATAKRKQDQVEES 34
+VWFQNRR KWRK A + +RK++ E S
Sbjct: 31 QVWFQNRRAKWRK--AERLKDEQRKRENGESS 60
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 319 VQVWFQNRRAKWRKREKAGAQT 340
>gi|426223981|ref|XP_004006152.1| PREDICTED: T-cell leukemia homeobox protein 2 [Ovis aries]
Length = 284
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+ WFQNRRTKWR++ A E + +
Sbjct: 201 VKTWFQNRRTKWRRQTAEEREAERHR 226
>gi|330864806|ref|NP_001179087.1| T-cell leukemia homeobox protein 2 [Bos taurus]
gi|296482771|tpg|DAA24886.1| TPA: T-cell leukemia homeobox 2-like [Bos taurus]
gi|440896446|gb|ELR48365.1| T-cell leukemia homeobox protein 2 [Bos grunniens mutus]
Length = 284
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+ WFQNRRTKWR++ A E + +
Sbjct: 201 VKTWFQNRRTKWRRQTAEEREAERHR 226
>gi|158286995|ref|XP_309065.4| AGAP005281-PA [Anopheles gambiae str. PEST]
gi|157019801|gb|EAA04807.5| AGAP005281-PA [Anopheles gambiae str. PEST]
Length = 602
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V++WFQNRRTKW+K+ A
Sbjct: 426 VKIWFQNRRTKWKKQDTA 443
>gi|158294661|ref|XP_315742.4| AGAP005727-PA [Anopheles gambiae str. PEST]
gi|157015669|gb|EAA11523.4| AGAP005727-PA [Anopheles gambiae str. PEST]
Length = 412
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRR KWR E+ +DQ
Sbjct: 213 VKIWFQNRRMKWRNSKERELLANGGSRDQ 241
>gi|18858681|ref|NP_571130.1| floating head [Danio rerio]
gi|1063604|gb|AAC42230.1| homeobox protein [Danio rerio]
gi|37787303|gb|AAP50512.1| floating head [Danio rerio]
gi|190340143|gb|AAI62344.1| Floating head [Danio rerio]
gi|1585426|prf||2124419A floating head gene
Length = 241
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 2 VEVWFQNRRTKWRKKH-------AAEMATAKRKQDQVEESEEEEEDDY 42
V+VWFQNRR KWRK+ A++ + + E+EE D+
Sbjct: 178 VKVWFQNRRIKWRKQSLEQQQAKLAKLGLTVPPKSPGSQGREDEERDF 225
>gi|62414116|ref|NP_001014818.1| paired mesoderm homeobox protein 2B [Danio rerio]
gi|326673538|ref|XP_003199912.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Danio rerio]
gi|56900854|gb|AAW31722.1| paired-like homeobox 2b [Danio rerio]
gi|190337114|gb|AAI62881.1| Paired-like homeobox 2b [Danio rerio]
gi|190339584|gb|AAI62887.1| Paired-like homeobox 2b [Danio rerio]
Length = 284
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 8/48 (16%)
Query: 2 VEVWFQNRRTKWRKKH--------AAEMATAKRKQDQVEESEEEEEDD 41
V+VWFQNRR K+RK+ AA+ T K+ + E+S+E + D
Sbjct: 142 VQVWFQNRRAKFRKQERAAAAAAAAAKNGTGKKSDSREEDSKEAKATD 189
>gi|359066624|ref|XP_003586276.1| PREDICTED: homeobox protein HMX1-like [Bos taurus]
Length = 347
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 247 VKIWFQNRRNKWKRQLAAELEAA 269
>gi|157122925|ref|XP_001659959.1| paired box protein, putative [Aedes aegypti]
gi|108882959|gb|EAT47184.1| AAEL001696-PA [Aedes aegypti]
Length = 289
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 140 VQVWFQNRRAKWRKREKA 157
>gi|157111857|ref|XP_001664321.1| homeobox protein dbx [Aedes aegypti]
gi|108878257|gb|EAT42482.1| AAEL005974-PA [Aedes aegypti]
Length = 307
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRR KWR E+ + +DQ
Sbjct: 97 VKIWFQNRRMKWRNSKERELLASGGSRDQ 125
>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
Length = 350
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + +T K
Sbjct: 187 VQVWFQNRRAKWRRQEKMDASTMK 210
>gi|397520973|ref|XP_003830581.1| PREDICTED: homeobox protein DBX1 [Pan paniscus]
Length = 339
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRR KWR E+ ++ ++Q
Sbjct: 225 VKIWFQNRRMKWRNSKERELLSSGGCREQ 253
>gi|351694610|gb|EHA97528.1| Homeobox protein HMX3 [Heterocephalus glaber]
Length = 384
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 298 VKIWFQNRRNKWKRQLAAELEAA 320
>gi|328680686|gb|AEB32458.1| homeobox protein D8 [Ichthyophis bannanicus]
Length = 73
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 2 VEVWFQNRRTKWRK-----KHAAEMATAKRKQDQVEESEEEEED 40
V++WFQNRR KW+K + A AK Q + E E EED
Sbjct: 26 VKIWFQNRRMKWKKENNKDRFPASTEEAKEGQAKKEPPEPTEED 69
>gi|308513120|gb|ADO33113.1| Goosecoid [Petromyzon marinus]
Length = 155
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 17/19 (89%), Gaps = 1/19 (5%)
Query: 2 VEVWFQNRRTKWRK-KHAA 19
VEVWF+NRR KWR+ KHAA
Sbjct: 130 VEVWFKNRRAKWRRQKHAA 148
>gi|431909016|gb|ELK12607.1| Homeobox protein Hox-A7 [Pteropus alecto]
Length = 232
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H E A
Sbjct: 174 IKIWFQNRRMKWKKEHKEEGPAA 196
>gi|242006747|ref|XP_002424208.1| nk homeobox protein, putative [Pediculus humanus corporis]
gi|212507557|gb|EEB11470.1| nk homeobox protein, putative [Pediculus humanus corporis]
Length = 114
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 19/21 (90%)
Query: 1 MVEVWFQNRRTKWRKKHAAEM 21
++++WFQNRRTKW++K+ ++
Sbjct: 10 VIKIWFQNRRTKWKRKYTNDV 30
>gi|198465267|ref|XP_001353569.2| GA11582 [Drosophila pseudoobscura pseudoobscura]
gi|198150082|gb|EAL31082.2| GA11582 [Drosophila pseudoobscura pseudoobscura]
Length = 578
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRR KWR E+ + +DQ
Sbjct: 307 VKIWFQNRRMKWRNSKERELLASGGSRDQ 335
>gi|32816227|gb|AAP88429.1| NK-1 homeobox protein [Nematostella vectensis]
Length = 275
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRRTKW+K++ TA
Sbjct: 201 VKIWFQNRRTKWKKQNPGMDVTA 223
>gi|220897925|gb|ACL81242.1| retinal homeobox protein 2 [Oryzias melastigma]
Length = 167
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + +T K
Sbjct: 28 VQVWFQNRRAKWRRQEKMDTSTMK 51
>gi|195161119|ref|XP_002021417.1| GL25317 [Drosophila persimilis]
gi|194118530|gb|EDW40573.1| GL25317 [Drosophila persimilis]
Length = 576
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRR KWR E+ + +DQ
Sbjct: 308 VKIWFQNRRMKWRNSKERELLASGGSRDQ 336
>gi|198458256|ref|XP_001360971.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
gi|198136277|gb|EAL25547.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
Length = 921
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+VWFQNRR KWR++ +E
Sbjct: 605 VQVWFQNRRAKWRRQEKSE 623
>gi|207452734|ref|NP_001129067.1| homeobox protein Hox-A7 [Pan troglodytes]
gi|146324919|sp|A2T7F3.1|HXA7_PANTR RecName: Full=Homeobox protein Hox-A7
gi|124111397|gb|ABM92108.1| HOXA7 [Pan troglodytes]
Length = 230
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H + TA
Sbjct: 174 IKIWFQNRRMKWKKEHKDDGPTA 196
>gi|431908960|gb|ELK12551.1| Homeobox protein MOX-2 [Pteropus alecto]
Length = 208
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KW++ + A R+++ V
Sbjct: 135 VKVWFQNRRMKWKRVKGGQQGAAAREKELV 164
>gi|310793307|gb|EFQ28768.1| homeobox domain-containing protein [Glomerella graminicola M1.001]
Length = 608
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 10/51 (19%)
Query: 5 WFQNRRTKWRKKHAAEMATAKRKQDQ----------VEESEEEEEDDYRHS 45
WFQNRR K +++ A+ A+RK +Q + ES ++ +DD R S
Sbjct: 100 WFQNRRAKAKQEKRAQENEARRKSEQTAEEPSNSETIRESFQDHDDDLRPS 150
>gi|194746988|ref|XP_001955936.1| GF20095 [Drosophila ananassae]
gi|190623218|gb|EDV38742.1| GF20095 [Drosophila ananassae]
Length = 535
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRR KWR E+ + +DQ
Sbjct: 278 VKIWFQNRRMKWRNSKERELLASGGSRDQ 306
>gi|449274578|gb|EMC83668.1| Homeobox protein not2, partial [Columba livia]
Length = 122
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYR 43
V+VWFQNRR KWRK+ + E AK Q V + + D +
Sbjct: 71 VKVWFQNRRIKWRKQ-SMEQKAAKLSQFGVIQPASTDSTDIK 111
>gi|426227419|ref|XP_004007815.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein MOX-2 [Ovis aries]
Length = 271
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KW++ + A R+++ V
Sbjct: 198 VKVWFQNRRMKWKRVKGGQQGAAAREKELV 227
>gi|363743430|ref|XP_003642838.1| PREDICTED: homeobox protein Hox-B7 [Gallus gallus]
Length = 217
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 2 VEVWFQNRRTKWRK--KHAAEMATAKRKQDQVEESEEE 37
+++WFQNRR KW+K K A ++++ K D VE+ EEE
Sbjct: 181 IKIWFQNRRMKWKKENKTACSGSSSQEKAD-VEDDEEE 217
>gi|327267684|ref|XP_003218629.1| PREDICTED: homeobox protein HMX3-like [Anolis carolinensis]
Length = 341
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 257 VKIWFQNRRNKWKRQLAAELEAA 279
>gi|259013247|ref|NP_001158368.1| brain-specific homeobox [Saccoglossus kowalevskii]
gi|196123797|gb|ACG70187.1| brain-specific homeobox protein [Saccoglossus kowalevskii]
Length = 233
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRLRRE 55
V+ WFQNRR K +K+ + ++ ++ E+ +E++DD S ++ + RE
Sbjct: 151 VKTWFQNRRMKHKKQQKKSTSNQTKEDTEMSENLDEDKDDDASSVSSCDVIDRE 204
>gi|148666245|gb|EDK98661.1| homeobox A7, isoform CRA_b [Mus musculus]
Length = 223
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
+++WFQNRR KW+K+H E
Sbjct: 167 IKIWFQNRRMKWKKEHKDE 185
>gi|195350153|ref|XP_002041606.1| GM16652 [Drosophila sechellia]
gi|194123379|gb|EDW45422.1| GM16652 [Drosophila sechellia]
Length = 419
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
VEVWF+NRR KWRK+ E ++ Q++
Sbjct: 330 VEVWFKNRRAKWRKQKREEQERLRKLQEE 358
>gi|170061154|ref|XP_001866113.1| homeobox protein dbx [Culex quinquefasciatus]
gi|167879364|gb|EDS42747.1| homeobox protein dbx [Culex quinquefasciatus]
Length = 217
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
V++WFQNRR KWR E+ +DQ
Sbjct: 17 VKIWFQNRRMKWRNSKERELLANGGSRDQ 45
>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
Length = 334
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + + K
Sbjct: 186 VQVWFQNRRAKWRRQEKMDASAVK 209
>gi|449476334|ref|XP_002191285.2| PREDICTED: homeobox protein unc-4 homolog [Taeniopygia guttata]
Length = 381
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 2 VEVWFQNRRTKWRKK 16
V+VWFQNRR KWRKK
Sbjct: 88 VQVWFQNRRAKWRKK 102
>gi|395846512|ref|XP_003795947.1| PREDICTED: homeobox protein BarH-like 2 [Otolemur garnettii]
Length = 279
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 2 VEVWFQNRRTKWRK------KHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAKRL 52
V+ W+QNRR KW+K + A + K++ + SEE E ++ HS ++ L
Sbjct: 177 VKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMHSQVQSQEL 233
>gi|258503871|gb|ACV72672.1| UNC-4 [Caenorhabditis remanei]
Length = 223
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
V+VWFQNRR KWRK+ ++ K+D
Sbjct: 123 VQVWFQNRRAKWRKREQNRHGGSEPKKD 150
>gi|1708053|sp|P54366.1|GSC_DROME RecName: Full=Homeobox protein goosecoid
gi|1177383|emb|CAA64699.1| gsc [Drosophila melanogaster]
gi|1399587|gb|AAB17948.1| goosecoid [Drosophila melanogaster]
Length = 419
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQ 30
VEVWF+NRR KWRK+ E ++ Q++
Sbjct: 330 VEVWFKNRRAKWRKQKREEQERLRKLQEE 358
>gi|403259914|ref|XP_003922439.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX
[Saimiri boliviensis boliviensis]
Length = 270
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 2 VEVWFQNRRTKWRK-KHAAEMATAKRKQDQVEESEEEEED 40
V+ WFQNRR KWR+ K + K + + ++ S ++ +D
Sbjct: 181 VKTWFQNRRAKWRRLKQENPQSNKKEEMESLDNSCDQRQD 220
>gi|397490741|ref|XP_003816351.1| PREDICTED: homeobox protein HMX3 [Pan paniscus]
Length = 357
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 271 VKIWFQNRRNKWKRQLAAELEAA 293
>gi|327268299|ref|XP_003218935.1| PREDICTED: hypothetical protein LOC100554099 [Anolis carolinensis]
Length = 413
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 2 VEVWFQNRRTKWRKKHAA 19
V+VWFQNRR KWRK+ A
Sbjct: 205 VQVWFQNRRAKWRKREKA 222
>gi|221112007|ref|XP_002162903.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Hydra magnipapillata]
Length = 272
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 5/31 (16%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVE 32
++VWFQNRR KWRK ++T K++Q Q E
Sbjct: 80 IQVWFQNRRAKWRK-----LSTTKQRQLQRE 105
>gi|62131821|gb|AAX68745.1| paired-like homeobox 2b [Danio rerio]
Length = 285
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 8/48 (16%)
Query: 2 VEVWFQNRRTKWRKKH--------AAEMATAKRKQDQVEESEEEEEDD 41
V+VWFQNRR K+RK+ AA+ T K+ + E+S+E + D
Sbjct: 143 VQVWFQNRRAKFRKQERAAAAAAAAAKNGTGKKSDSREEDSKEAKATD 190
>gi|410913781|ref|XP_003970367.1| PREDICTED: LOW QUALITY PROTEIN: T-cell leukemia homeobox protein
3-like [Takifugu rubripes]
Length = 283
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 211 VKTWFQNRRTKWRRQTAEEREAERQQANRL 240
>gi|322784032|gb|EFZ11172.1| hypothetical protein SINV_13707 [Solenopsis invicta]
Length = 328
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 2 VEVWFQNRRTKWRKK 16
V VWFQNRR KWRKK
Sbjct: 57 VAVWFQNRRAKWRKK 71
>gi|258503879|gb|ACV72676.1| UNC-4 [Caenorhabditis remanei]
gi|258503895|gb|ACV72684.1| UNC-4 [Caenorhabditis remanei]
gi|258503899|gb|ACV72686.1| UNC-4 [Caenorhabditis remanei]
gi|258503901|gb|ACV72687.1| UNC-4 [Caenorhabditis remanei]
Length = 223
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQD 29
V+VWFQNRR KWRK+ ++ K+D
Sbjct: 123 VQVWFQNRRAKWRKREQNRHGGSEPKKD 150
>gi|146217159|gb|ABQ10643.1| homeodomain protein Tlx [Platynereis dumerilii]
Length = 325
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
V+ WFQNRRTKWR++ A E
Sbjct: 234 VKTWFQNRRTKWRRQTAEE 252
>gi|6594625|gb|AAF18563.1|AF030286_1 homeobox protein [Danio rerio]
Length = 194
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEEDDYRHSDNAAK 50
V++WFQNRR KWR E++ +++ + + E D H+ +K
Sbjct: 138 VKIWFQNRRMKWRNSREKEISNTHTHMEKLTDWSQSEPADDTHTPAQSK 186
>gi|395841170|ref|XP_003793419.1| PREDICTED: T-cell leukemia homeobox protein 2 [Otolemur garnettii]
Length = 284
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRK 27
V+ WFQNRRTKWR++ A E + +
Sbjct: 201 VKTWFQNRRTKWRRQTAEEREAERHR 226
>gi|355562849|gb|EHH19443.1| hypothetical protein EGK_20147, partial [Macaca mulatta]
Length = 277
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRR KW+++ AAE+ A
Sbjct: 191 VKIWFQNRRNKWKRQLAAELEAA 213
>gi|313218118|emb|CBY41431.1| unnamed protein product [Oikopleura dioica]
Length = 357
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 2 VEVWFQNRRTKWRKKHAAEM---ATAKRKQDQVEESEEEEED 40
V+VWF+NRR K+R++ + +++ K D ++SE EE D
Sbjct: 124 VQVWFKNRRAKYRQQQQQKTNPDGSSEDKDDDGKKSENEETD 165
>gi|260828235|ref|XP_002609069.1| nk homeobox 7 [Branchiostoma floridae]
gi|229294423|gb|EEN65079.1| nk homeobox 7 [Branchiostoma floridae]
Length = 327
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
V++WFQNRRTKW+K+ A A
Sbjct: 192 VKIWFQNRRTKWKKQDGISNAEA 214
>gi|296209379|ref|XP_002751497.1| PREDICTED: homeobox protein Hox-A7 [Callithrix jacchus]
gi|167427229|gb|ABZ80210.1| homeobox A7 (predicted) [Callithrix jacchus]
Length = 230
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 2 VEVWFQNRRTKWRKKHAAE 20
+++WFQNRR KW+K+H E
Sbjct: 174 IKIWFQNRRMKWKKEHKDE 192
>gi|56694804|gb|AAW23064.1| Arx [Oikopleura dioica]
Length = 277
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 16/19 (84%), Gaps = 2/19 (10%)
Query: 2 VEVWFQNRRTKWRK--KHA 18
V+VWFQNRR KWRK KHA
Sbjct: 170 VQVWFQNRRAKWRKREKHA 188
>gi|395511533|ref|XP_003760013.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Sarcophilus harrisii]
Length = 319
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ E+ + K
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVTSMK 203
>gi|348522046|ref|XP_003448537.1| PREDICTED: retinal homeobox protein Rx2-like [Oreochromis
niloticus]
Length = 326
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAK 25
V+VWFQNRR KWR++ + T K
Sbjct: 179 VQVWFQNRRAKWRRQEKMDTTTMK 202
>gi|195492695|ref|XP_002094102.1| GE21647 [Drosophila yakuba]
gi|194180203|gb|EDW93814.1| GE21647 [Drosophila yakuba]
Length = 532
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQ 28
V++WFQNRR KW++ A+ +R +
Sbjct: 491 VKIWFQNRRMKWKRSKKAQQEAKERAK 517
>gi|3581956|emb|CAA64693.1| DthoxE [Girardia tigrina]
Length = 329
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQVEESEEEEE 39
+++WFQNRR KW+K H +Q E+ E+E+
Sbjct: 270 IKIWFQNRRMKWKKDHNIPKLNGPGTLEQYEQQFEKEQ 307
>gi|397472859|ref|XP_003807951.1| PREDICTED: homeobox protein Hox-A7 [Pan paniscus]
Length = 230
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H + TA
Sbjct: 174 IKIWFQNRRMKWKKEHKDDGPTA 196
>gi|195110703|ref|XP_001999919.1| GI24795 [Drosophila mojavensis]
gi|193916513|gb|EDW15380.1| GI24795 [Drosophila mojavensis]
Length = 307
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AAE+
Sbjct: 225 VKIWFQNRRNKWKRQLAAEL 244
>gi|410215418|gb|JAA04928.1| homeobox A7 [Pan troglodytes]
gi|410339189|gb|JAA38541.1| homeobox A7 [Pan troglodytes]
Length = 230
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATA 24
+++WFQNRR KW+K+H + TA
Sbjct: 174 IKIWFQNRRMKWKKEHKDDGPTA 196
>gi|47214061|emb|CAG00719.1| unnamed protein product [Tetraodon nigroviridis]
Length = 69
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 2 VEVWFQNRRTKWRKKHAAEM 21
V++WFQNRR KW+++ AA+M
Sbjct: 46 VKIWFQNRRNKWKRQIAADM 65
>gi|377685596|gb|AFB74467.1| RX, partial [Schmidtea polychroa]
Length = 199
Score = 34.3 bits (77), Expect = 10.0, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+VWFQNRR KWR++ E A +V
Sbjct: 83 VQVWFQNRRAKWRRQEKIEAANHTHNLQEV 112
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 34.3 bits (77), Expect = 10.0, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 2 VEVWFQNRRTKWRKKHAAEMAT 23
V+VWFQNRR KWRK+ A T
Sbjct: 190 VQVWFQNRRAKWRKREKAGAQT 211
>gi|29372467|emb|CAD83853.1| homeobox protein AmphiTlx [Branchiostoma floridae]
Length = 255
Score = 34.3 bits (77), Expect = 10.0, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 2 VEVWFQNRRTKWRKKHAAEMATAKRKQDQV 31
V+ WFQNRRTKWR++ A E +++ +++
Sbjct: 167 VKTWFQNRRTKWRRQTAEEREAERQQANRM 196
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.122 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 982,677,278
Number of Sequences: 23463169
Number of extensions: 29934980
Number of successful extensions: 491282
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1588
Number of HSP's successfully gapped in prelim test: 502
Number of HSP's that attempted gapping in prelim test: 488919
Number of HSP's gapped (non-prelim): 2582
length of query: 65
length of database: 8,064,228,071
effective HSP length: 37
effective length of query: 28
effective length of database: 7,196,090,818
effective search space: 201490542904
effective search space used: 201490542904
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)