BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5355
(76 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q60554|NKX61_MESAU Homeobox protein Nkx-6.1 OS=Mesocricetus auratus GN=NKX6-1 PE=1
SV=1
Length = 364
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 51/52 (98%)
Query: 4 DKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
DKD K+KHTRPTFSGQQIFALEKTFEQTKYLAGPERA+LAY+LGMTESQVKV
Sbjct: 231 DKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 282
>sp|P78426|NKX61_HUMAN Homeobox protein Nkx-6.1 OS=Homo sapiens GN=NKX6-1 PE=2 SV=2
Length = 367
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 51/52 (98%)
Query: 4 DKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
DKD K+KHTRPTFSGQQIFALEKTFEQTKYLAGPERA+LAY+LGMTESQVKV
Sbjct: 231 DKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 282
>sp|O35762|NKX61_RAT Homeobox protein Nkx-6.1 OS=Rattus norvegicus GN=Nkx6-1 PE=2 SV=1
Length = 365
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 51/52 (98%)
Query: 4 DKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
DKD K+KHTRPTFSGQQIFALEKTFEQTKYLAGPERA+LAY+LGMTESQVKV
Sbjct: 232 DKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 283
>sp|Q99MA9|NKX61_MOUSE Homeobox protein Nkx-6.1 OS=Mus musculus GN=Nkx6-1 PE=1 SV=1
Length = 365
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 51/52 (98%)
Query: 4 DKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
DKD K+KHTRPTFSGQQIFALEKTFEQTKYLAGPERA+LAY+LGMTESQVKV
Sbjct: 232 DKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 283
>sp|Q9C056|NKX62_HUMAN Homeobox protein Nkx-6.2 OS=Homo sapiens GN=NKX6-2 PE=2 SV=2
Length = 277
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 51/52 (98%)
Query: 4 DKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
DKD KKKH+RPTFSGQQIFALEKTFEQTKYLAGPERA+LAY+LGMTESQVKV
Sbjct: 143 DKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 194
>sp|A6NJ46|NKX63_HUMAN Homeobox protein Nkx-6.3 OS=Homo sapiens GN=NKX6-3 PE=2 SV=1
Length = 265
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 49/53 (92%)
Query: 3 SDKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
SD KKKHTRPTF+G QIFALEKTFEQTKYLAGPERA+LAY+LGMTESQVKV
Sbjct: 133 SDSIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 185
>sp|Q3UHX8|NKX63_MOUSE Homeobox protein Nkx-6.3 OS=Mus musculus GN=Nkx6-3 PE=2 SV=1
Length = 262
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 49/53 (92%)
Query: 3 SDKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
SD KKKHTRPTF+G QIFALEKTFEQTKYLAGPERA+LAY+LGMTESQVKV
Sbjct: 134 SDTIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 186
>sp|A5YC49|NKX63_XENLA Homeobox protein Nkx-6.3 OS=Xenopus laevis GN=nkx6-3 PE=2 SV=1
Length = 254
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 52/55 (94%)
Query: 1 NNSDKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+N++ ++KKHTRPTF+G QIFALEKTFEQTKYLAGPERA+LA++LGM+ESQVKV
Sbjct: 125 SNTEGSSRKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAFSLGMSESQVKV 179
>sp|P78367|NKX32_HUMAN Homeobox protein Nkx-3.2 OS=Homo sapiens GN=NKX3-2 PE=2 SV=2
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 8 KKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+KK +R FS Q+F LE+ F +YL+GPERA LA +L +TE+QVK+
Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKI 252
>sp|P97503|NKX32_MOUSE Homeobox protein Nkx-3.2 OS=Mus musculus GN=Nkx3-2 PE=1 SV=2
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 8 KKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+KK +R FS Q+F LE+ F +YL+GPERA LA +L +TE+QVK+
Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKI 252
>sp|P22809|BAGP_DROME Homeobox protein bagpipe OS=Drosophila melanogaster GN=bap PE=2
SV=3
Length = 382
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 7 AKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
++KK +R FS Q+F LE+ F Q +YL+GPER+++A +L +TE+QVK+
Sbjct: 173 SRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKI 221
>sp|P56407|HM09_CAEEL Homeobox protein ceh-9 OS=Caenorhabditis elegans GN=ceh-9 PE=4 SV=2
Length = 147
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 8 KKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K+K R TFSG+Q+F LEK FE KYL+ +R++LA L +TE+QVK+
Sbjct: 69 KRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKI 116
>sp|Q90XP0|HMX3A_ORYLA Homeobox protein HMX3-A OS=Oryzias latipes GN=hmx3a PE=2 SV=1
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K +KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 171 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKI 221
>sp|Q504H8|HMX3_DANRE Homeobox protein HMX3 OS=Danio rerio GN=hmx3 PE=2 SV=1
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K +KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 166 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKI 216
>sp|P70061|NKX32_XENLA Homeobox protein Nkx-3.2 OS=Xenopus laevis GN=nkx3-2 PE=2 SV=1
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 8 KKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+KK +R FS Q+F LE+ F +YL+GPERA LA +L +TE+QVK+
Sbjct: 201 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKI 248
>sp|O93590|ZAX_XENLA Homeobox protein zampogna OS=Xenopus laevis GN=zax PE=2 SV=1
Length = 224
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 7 AKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+ KK +R FS Q++ LE+ F +YL+GPERA LA +L +TE+QVK+
Sbjct: 98 SSKKRSRAAFSHAQVYELERRFSLQRYLSGPERADLAASLKLTETQVKI 146
>sp|Q0P4W6|HMX3_XENTR Homeobox protein HMX3 OS=Xenopus tropicalis GN=hmx3 PE=2 SV=1
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K +KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 174 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKI 224
>sp|Q8JJ64|HMX3_XENLA Homeobox protein HMX3 OS=Xenopus laevis GN=hmx3 PE=1 SV=1
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K +KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 174 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKI 224
>sp|O57601|HMX3_CHICK Homeobox protein HMX3 OS=Gallus gallus GN=HMX3 PE=2 SV=1
Length = 308
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K +KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 177 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKI 227
>sp|Q90XN9|HMX3B_ORYLA Homeobox protein HMX3-B OS=Oryzias latipes GN=hmx3b PE=2 SV=1
Length = 290
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K +KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 162 KPCRKKKTRTVFSRSQVFQLESTFDIKRYLSSSERAGLAASLHLTETQVKI 212
>sp|Q26656|HMX_STRPU Homeobox protein Hmx (Fragment) OS=Strongylocentrotus purpuratus
GN=HMX PE=2 SV=1
Length = 405
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 33/48 (68%)
Query: 8 KKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
KKK TR FS Q+F LE TFE +YL+ ERA LA L +TE+QVK+
Sbjct: 252 KKKKTRTVFSRSQVFQLESTFEVKRYLSSSERAGLAANLHLTETQVKI 299
>sp|A6NHT5|HMX3_HUMAN Homeobox protein HMX3 OS=Homo sapiens GN=HMX3 PE=2 SV=1
Length = 357
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 7 AKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 225 CRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKI 273
>sp|P42581|HMX3_MOUSE Homeobox protein HMX3 OS=Mus musculus GN=Hmx3 PE=1 SV=3
Length = 356
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 7 AKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 225 CRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKI 273
>sp|Q9DE09|HMX1_CHICK Homeobox protein HMX1 OS=Gallus gallus GN=HMX1 PE=2 SV=1
Length = 333
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 8 KKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 200 RKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHLTETQVKI 247
>sp|Q9W7E8|KOZA_XENLA Homeobox protein koza OS=Xenopus laevis GN=koza PE=2 SV=1
Length = 213
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 8 KKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
++K +R FS Q+ LE+ F KYL+ PERA+LA +L +TE+QVK+
Sbjct: 101 QQKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAKSLKLTETQVKI 148
>sp|Q04787|BSH_DROME Brain-specific homeobox protein OS=Drosophila melanogaster GN=bsh
PE=2 SV=5
Length = 429
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 2 NSDKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
N+ + +++ R FS Q+ LEK FE +YL+ PER +LA ALG++E+QVK
Sbjct: 267 NALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKT 320
>sp|Q98875|DLX1A_DANRE Homeobox protein Dlx1a OS=Danio rerio GN=dlx1a PE=2 SV=1
Length = 252
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL + F+QT+YLA PERA+LA +LG+T++QVK+
Sbjct: 124 KGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKI 174
>sp|Q64317|DLX1_MOUSE Homeobox protein DLX-1 OS=Mus musculus GN=Dlx1 PE=2 SV=1
Length = 255
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL + F+QT+YLA PERA+LA +LG+T++QVK+
Sbjct: 124 KGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKI 174
>sp|P56177|DLX1_HUMAN Homeobox protein DLX-1 OS=Homo sapiens GN=DLX1 PE=2 SV=3
Length = 255
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL + F+QT+YLA PERA+LA +LG+T++QVK+
Sbjct: 124 KGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKI 174
>sp|O70218|HMX1_MOUSE Homeobox protein HMX1 OS=Mus musculus GN=Hmx1 PE=2 SV=1
Length = 332
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+ ++K TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 187 RGGRRKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKI 237
>sp|Q9VEI9|HMX_DROME Homeobox protein Hmx OS=Drosophila melanogaster GN=Hmx PE=2 SV=3
Length = 592
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 8 KKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+KK TR FS Q+F LE TF+ +YL+ ERA LA +L +TE+QVK+
Sbjct: 467 RKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKI 514
>sp|Q00400|DTH1_DUGTI Homeobox protein DTH-1 OS=Dugesia tigrina GN=DTH-1 PE=2 SV=2
Length = 533
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 NNSDKD-AKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
N+S D KK+ R FS +QI LE+ F Q KYL+ PER LA +G++ +QVK+
Sbjct: 368 NSSSGDIGKKRKRRVLFSKKQILELERHFRQKKYLSAPEREHLANLIGLSPTQVKI 423
>sp|P56179|DLX6_HUMAN Homeobox protein DLX-6 OS=Homo sapiens GN=DLX6 PE=2 SV=2
Length = 175
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL F+QT+YLA PERA+LA +LG+T++QVK+
Sbjct: 45 KGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI 95
>sp|P70397|DLX6_MOUSE Homeobox protein DLX-6 OS=Mus musculus GN=Dlx6 PE=2 SV=3
Length = 175
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL F+QT+YLA PERA+LA +LG+T++QVK+
Sbjct: 45 KGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI 95
>sp|Q98877|DLX6A_DANRE Homeobox protein Dlx6a OS=Danio rerio GN=dlx6a PE=2 SV=1
Length = 247
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL F+QT+YLA PERA+LA +LG+T++QVK+
Sbjct: 121 KGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI 171
>sp|P53773|DLL1_XENLA Homeobox protein DLL-1 OS=Xenopus laevis GN=dll1 PE=2 SV=1
Length = 250
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL F+QT+YLA PERA+LA +LG+T++QVK+
Sbjct: 121 KGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGVTQTQVKI 171
>sp|P87393|DLX2_ELECQ Homeobox protein DLX-2 (Fragment) OS=Eleutherodactylus coqui
GN=DLX2 PE=2 SV=1
Length = 103
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 50 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 100
>sp|P28468|HOX1_HALRO Homeobox protein AHox1 OS=Halocynthia roretzi GN=AHOX1 PE=2 SV=1
Length = 741
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 8 KKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
++K R FS Q LEK+F+ KY+A PER KLA AL +T++QVK+
Sbjct: 644 RRKWNRAVFSLMQRRGLEKSFQSQKYVAKPERRKLADALSLTDAQVKI 691
>sp|P40764|DLX2_MOUSE Homeobox protein DLX-2 OS=Mus musculus GN=Dlx2 PE=2 SV=1
Length = 332
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 151 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 201
>sp|P50575|DLX5_RAT Homeobox protein DLX-5 OS=Rattus norvegicus GN=Dlx5 PE=2 SV=1
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 133 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 183
>sp|P56178|DLX5_HUMAN Homeobox protein DLX-5 OS=Homo sapiens GN=DLX5 PE=1 SV=2
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 133 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 183
>sp|Q07687|DLX2_HUMAN Homeobox protein DLX-2 OS=Homo sapiens GN=DLX2 PE=1 SV=2
Length = 328
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 148 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 198
>sp|Q98876|DLX2B_DANRE Homeobox protein Dlx2b OS=Danio rerio GN=dlx2b PE=2 SV=1
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 121 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 171
>sp|P70396|DLX5_MOUSE Homeobox protein DLX-5 OS=Mus musculus GN=Dlx5 PE=1 SV=1
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 133 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 183
>sp|P87394|DLX4_ELECQ Homeobox protein DLX-4 (Fragment) OS=Eleutherodactylus coqui
GN=DLX4 PE=2 SV=1
Length = 131
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 39/53 (73%)
Query: 3 SDKDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+ K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 76 NGKPKKIRKPRTIYSSFQVAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 128
>sp|P54655|DLL3_XENLA Homeobox protein DLL-3 OS=Xenopus laevis GN=dll3 PE=2 SV=1
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 133 KPKKIRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 183
>sp|P50574|DLX2A_DANRE Homeobox protein Dlx2a OS=Danio rerio GN=dlx2a PE=2 SV=1
Length = 270
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 119 KPKKVRKPRTIYSTFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 169
>sp|P97436|NKX31_MOUSE Homeobox protein Nkx-3.1 OS=Mus musculus GN=Nkx3-1 PE=1 SV=1
Length = 237
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 9 KKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
+K +R FS Q+ LE+ F KYL+ PERA LA L +TE+QVK+
Sbjct: 125 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKI 171
>sp|P50576|DLX5A_DANRE Homeobox protein Dlx5a OS=Danio rerio GN=dlx5a PE=2 SV=1
Length = 283
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F+ T+YLA PERA+LA +LG+T++QVK+
Sbjct: 133 KPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKI 183
>sp|P53775|DLL4_XENLA Homeobox protein DLL-4 OS=Xenopus laevis GN=dll4 PE=2 SV=1
Length = 285
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 5 KDAKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKV 55
K K + R +S Q+ AL++ F++T+YLA PERA+LA +LG+T++QVK+
Sbjct: 123 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGVTQTQVKI 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.123 0.330
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,845,219
Number of Sequences: 539616
Number of extensions: 735733
Number of successful extensions: 2609
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1478
Number of HSP's gapped (non-prelim): 1159
length of query: 76
length of database: 191,569,459
effective HSP length: 47
effective length of query: 29
effective length of database: 166,207,507
effective search space: 4820017703
effective search space used: 4820017703
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)