BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5357
(181 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P20058|HEMO_RABIT Hemopexin OS=Oryctolagus cuniculus GN=HPX PE=1 SV=2
Length = 460
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 11/160 (6%)
Query: 22 NHDDQSVRYEPHAFSDACSYSYASVVYLRSVSHSGDIRTNIVFAKSRVAPTNKPTLPRLE 81
H +S R +P A Y+ S SH + TN S P P
Sbjct: 247 QHGHESTRCDPDLVLSAMVSDNHGATYVFSGSHYWRLDTNRDGWHSWPIAHQWPQGP--S 304
Query: 82 LLGALIAYRNKCYLWIDNQCVIHWLTGNKVFTTFVNNRVKALKEIKASVFPIVYKYIPTD 141
+ A ++ +K YL D + + G T VN K L++ S P V I +
Sbjct: 305 TVDAAFSWEDKLYLIQDTKVYVFLTKGG---YTLVNGYPKRLEKELGS--PPV---ISLE 356
Query: 142 SNPADLACKGSSAVY-LQGNRLWWEGLGFLTLETWPDFPF 180
+ A C GSS ++ + G RLWW L TW + P+
Sbjct: 357 AVDAAFVCPGSSRLHIMAGRRLWWLDLKSGAQATWTELPW 396
>sp|P02790|HEMO_HUMAN Hemopexin OS=Homo sapiens GN=HPX PE=1 SV=2
Length = 462
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 11/161 (6%)
Query: 21 NNHDDQSVRYEPHAFSDACSYSYASVVYLRSVSHSGDIRTNIVFAKSRVAPTNKPTLPRL 80
+H + +R PH A + Y S +H + T+ S P P
Sbjct: 248 THHGPEYMRCSPHLVLSALTSDNHGATYAFSGTHYWRLDTSRDGWHSWPIAHQWPQGP-- 305
Query: 81 ELLGALIAYRNKCYLWIDNQCVIHWLTGNKVFTTFVNNRVKALKEIKASVFPIVYKYIPT 140
+ A ++ K YL Q + G T V+ K L++ + I+
Sbjct: 306 SAVDAAFSWEEKLYLVQGTQVYVFLTKGG---YTLVSGYPKRLEKEVGTPHGIIL----- 357
Query: 141 DSNPADLACKGSSAVY-LQGNRLWWEGLGFLTLETWPDFPF 180
DS A C GSS ++ + G RLWW L TW + P+
Sbjct: 358 DSVDAAFICPGSSRLHIMAGRRLWWLDLKSGAQATWTELPW 398
>sp|Q5R543|HEMO_PONAB Hemopexin OS=Pongo abelii GN=HPX PE=2 SV=1
Length = 462
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 59/161 (36%), Gaps = 11/161 (6%)
Query: 21 NNHDDQSVRYEPHAFSDACSYSYASVVYLRSVSHSGDIRTNIVFAKSRVAPTNKPTLPRL 80
+H + +R PH A + Y S +H + T+ S P P
Sbjct: 248 THHGPEYMRCSPHLVLSALTSDNHGATYAFSGTHYWRLDTSRDGWHSWPIAHQWPQGP-- 305
Query: 81 ELLGALIAYRNKCYLWIDNQCVIHWLTGNKVFTTFVNNRVKALKEIKASVFPIVYKYIPT 140
+ A ++ K YL Q + G T V+ K L++ + I+
Sbjct: 306 STVDAAFSWEEKLYLVQGTQVYVFLTKGG---YTLVSGYPKQLEKEVGTPHGIIL----- 357
Query: 141 DSNPADLACKGSSAVY-LQGNRLWWEGLGFLTLETWPDFPF 180
DS A C GSS ++ + G RLWW L W + P+
Sbjct: 358 DSVDAAFICPGSSRLHIMAGRRLWWLDLKSGAQALWTELPW 398
>sp|B5XP95|ADEC_KLEP3 Adenine deaminase OS=Klebsiella pneumoniae (strain 342) GN=ade PE=3
SV=1
Length = 603
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 9 SNIPVARYFDVPNNHDDQSVRYEPHAFSDACSYSYASVVYLRSVSHSGDIRTNIVFAKSR 68
S++P RY ++ +V ++PH A+V+ + V ++ D ++
Sbjct: 87 SHLPPERYAEIVLTQGTTAVFWDPHEL--------ANVLGVEGVRYAVDASRHLPLQVMV 138
Query: 69 VAPTNKPTLPRLELLGALIA 88
AP++ P+ P LE+ GA A
Sbjct: 139 AAPSSVPSTPGLEMSGADFA 158
>sp|P68875|S230_PLAFO Transmission-blocking target antigen S230 OS=Plasmodium falciparum
(isolate NF54) GN=S230 PE=1 SV=1
Length = 3135
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 103 IHWLTGNKVFTTFVNNRVKALKEIKASVFPIVYKYIPT 140
I W NK VNN V KE+ A F + Y +IPT
Sbjct: 815 IKWNKENKSLGNLVNNSVVYNKEMNAKYFNVQYVHIPT 852
>sp|P68874|S230_PLAF7 Transmission-blocking target antigen S230 OS=Plasmodium falciparum
(isolate 3D7) GN=S230 PE=2 SV=1
Length = 3135
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 103 IHWLTGNKVFTTFVNNRVKALKEIKASVFPIVYKYIPT 140
I W NK VNN V KE+ A F + Y +IPT
Sbjct: 815 IKWNKENKSLGNLVNNSVVYNKEMNAKYFNVQYVHIPT 852
>sp|A6TBK1|ADEC_KLEP7 Adenine deaminase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=ade PE=3 SV=1
Length = 603
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 9 SNIPVARYFDVPNNHDDQSVRYEPHAFSDACSYSYASVVYLRSVSHSGDIRTNIVFAKSR 68
S++P RY ++ +V ++PH A+V+ + V ++ D ++
Sbjct: 87 SHLPPERYAEIVLTQGTTAVFWDPHEL--------ANVLGVAGVRYAVDASRHLPLQVMV 138
Query: 69 VAPTNKPTLPRLELLGALIA 88
AP++ P+ P LE+ GA A
Sbjct: 139 AAPSSVPSTPGLEMSGADFA 158
>sp|P50828|HEMO_PIG Hemopexin OS=Sus scrofa GN=HPX PE=1 SV=1
Length = 459
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 85 ALIAYRNKCYLWIDNQCVIHWLTGNKVFTTFVNNRVKALKEIKASVFPIVYKYIPTDSNP 144
A ++ +K YL Q I +LT K T V+N K L++ S I D+
Sbjct: 303 AAFSWDDKLYLIQGTQVYI-FLT--KAGYTLVDNYPKQLEKELGSPHGISL-----DAVD 354
Query: 145 ADLACKGSSAVY-LQGNRLWWEGLGFLTLETWPDFPF 180
A C G+S ++ + G +LWW L W + P+
Sbjct: 355 ATFVCPGTSRLHVMAGRKLWWLDLSLGAQGPWTELPW 391
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,502,105
Number of Sequences: 539616
Number of extensions: 2673032
Number of successful extensions: 4528
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4523
Number of HSP's gapped (non-prelim): 13
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)