Query psy5364
Match_columns 78
No_of_seqs 107 out of 383
Neff 6.9
Searched_HMMs 29240
Date Sat Aug 17 00:42:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5364.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5364hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2di9_A Filamin-B; beta-sandwic 99.9 3.4E-23 1.2E-27 131.1 0.4 72 5-77 2-73 (131)
2 2k7p_A Filamin-A; IG-like, ABP 99.8 9.3E-21 3.2E-25 125.6 10.7 75 1-77 65-139 (188)
3 2k7q_A Filamin-A; IG-like, ABP 99.8 5.9E-21 2E-25 126.4 8.0 76 1-77 62-139 (191)
4 2j3s_A Filamin-A; cytoskeleton 99.8 8.4E-21 2.9E-25 132.0 9.1 76 1-77 162-239 (288)
5 2e9j_A Filamin-B; beta-sandwic 99.8 1.2E-19 4.1E-24 112.8 3.9 63 15-77 2-65 (119)
6 2nqc_A Filamin-C; immunoglobul 99.8 6.4E-19 2.2E-23 112.8 4.7 76 1-78 13-88 (138)
7 2eea_A Filamin-B; beta-sandwic 99.8 3.9E-19 1.3E-23 109.9 3.5 62 14-77 2-63 (115)
8 1wlh_A Gelation factor; ABP-12 99.7 4.4E-18 1.5E-22 118.7 8.2 76 1-77 72-154 (311)
9 2eec_A Filamin-B; beta-sandwic 99.7 8.5E-18 2.9E-22 105.7 5.0 60 18-78 2-64 (125)
10 2dib_A Filamin-B; beta-sandwic 99.7 9.5E-18 3.2E-22 105.0 1.9 62 16-77 3-68 (128)
11 1qfh_A Protein (gelation facto 99.6 1.4E-15 4.6E-20 101.6 8.8 65 1-77 75-146 (212)
12 1wlh_A Gelation factor; ABP-12 99.6 5.3E-15 1.8E-19 103.1 8.9 65 1-77 174-245 (311)
13 2k9u_A Gamma filamin; cytoskel 99.6 1.3E-15 4.5E-20 94.5 4.0 56 21-77 3-60 (119)
14 2d7m_A Filamin-C; beta-sandwic 99.6 4.2E-15 1.4E-19 91.6 5.1 54 21-77 1-55 (115)
15 2dia_A Filamin-B; beta-sandwic 99.5 3.4E-14 1.2E-18 87.3 4.9 40 2-41 74-113 (113)
16 2dia_A Filamin-B; beta-sandwic 99.5 2E-14 7E-19 88.2 3.1 53 21-77 1-53 (113)
17 2d7m_A Filamin-C; beta-sandwic 99.5 4.6E-14 1.6E-18 86.9 4.2 41 1-41 75-115 (115)
18 2dlg_A Filamin-B; beta-sandwic 99.4 4.7E-14 1.6E-18 86.0 3.6 41 1-41 62-102 (102)
19 2dib_A Filamin-B; beta-sandwic 99.4 4.6E-14 1.6E-18 88.1 3.2 41 1-41 88-128 (128)
20 2dj4_A Filamin-B; beta-sandwic 99.4 1.6E-13 5.4E-18 83.7 4.9 54 21-77 1-54 (108)
21 2di9_A Filamin-B; beta-sandwic 99.4 9.1E-14 3.1E-18 87.6 3.7 40 2-41 92-131 (131)
22 2d7o_A Filamin-C; beta-sandwic 99.4 5.3E-14 1.8E-18 86.5 1.9 53 21-77 1-53 (111)
23 2dmc_A Filamin-B; beta-sandwic 99.4 7.1E-14 2.4E-18 86.8 1.1 55 13-77 2-56 (116)
24 2dmc_A Filamin-B; beta-sandwic 99.3 4E-13 1.4E-17 83.4 3.2 38 1-38 76-115 (116)
25 3rgh_A Filamin-A; cell adhesio 99.3 1.2E-12 4.3E-17 78.9 4.8 47 31-78 5-51 (100)
26 2di8_A Filamin-B; beta-sandwic 99.3 1.2E-12 4E-17 80.5 4.0 53 21-77 1-53 (111)
27 2j3s_A Filamin-A; cytoskeleton 99.3 4.8E-12 1.6E-16 87.8 7.0 73 2-78 67-143 (288)
28 2dic_A Filamin-B; beta-sandwic 99.3 1.1E-12 3.7E-17 79.7 2.9 52 26-78 3-54 (105)
29 4b7l_A Filamin-B; structural p 99.3 2.3E-12 8E-17 92.2 4.7 50 29-78 249-299 (347)
30 1v05_A Filamin C; actin-bindin 99.3 2.7E-12 9.4E-17 76.5 3.9 45 32-77 4-48 (96)
31 2d7n_A Filamin-C; beta-sandwic 99.3 3.1E-12 1.1E-16 76.9 4.1 40 1-41 53-92 (93)
32 2bp3_A Filamin A; structural p 99.2 7.2E-12 2.5E-16 74.9 4.3 45 32-77 4-48 (97)
33 2dmb_A Filamin-B; beta-sandwic 99.2 1.1E-11 3.9E-16 77.5 5.1 49 29-77 6-54 (124)
34 2k9u_A Gamma filamin; cytoskel 99.2 4.3E-12 1.5E-16 78.5 2.9 39 2-40 79-118 (119)
35 2w0p_A Filamin-A; alternative 99.2 6.7E-12 2.3E-16 74.7 3.5 45 32-77 1-45 (94)
36 2dic_A Filamin-B; beta-sandwic 99.2 2.5E-11 8.4E-16 73.7 5.7 35 1-35 71-105 (105)
37 2ee6_A Filamin-B; beta-sandwic 99.2 2.6E-11 9E-16 73.5 4.4 46 31-77 8-53 (105)
38 2dj4_A Filamin-B; beta-sandwic 99.2 4.1E-11 1.4E-15 72.9 5.0 35 1-35 74-108 (108)
39 3cnk_A Filamin-A; FLNA24, X-RA 99.1 7E-11 2.4E-15 69.5 4.5 41 36-77 1-41 (89)
40 2ds4_A Tripartite motif protei 99.1 5.6E-11 1.9E-15 72.0 3.4 53 21-77 1-60 (113)
41 2e9j_A Filamin-B; beta-sandwic 99.0 1.4E-10 4.9E-15 71.6 3.7 35 1-35 85-119 (119)
42 2ee6_A Filamin-B; beta-sandwic 99.0 3.2E-10 1.1E-14 68.6 5.0 32 2-33 72-103 (105)
43 2ee9_A Filamin-B; beta-sandwic 99.0 3.5E-10 1.2E-14 68.2 4.9 31 1-31 61-91 (95)
44 2w0p_A Filamin-A; alternative 99.0 4.3E-10 1.5E-14 66.8 5.0 29 2-30 64-92 (94)
45 2d7p_A Filamin-C; beta-sandwic 99.0 1.9E-10 6.5E-15 70.8 3.5 52 21-77 1-52 (112)
46 2d7p_A Filamin-C; beta-sandwic 99.0 3.2E-10 1.1E-14 69.8 4.2 31 1-31 72-102 (112)
47 3rgh_A Filamin-A; cell adhesio 99.0 5.5E-10 1.9E-14 67.2 5.0 29 2-30 71-99 (100)
48 3cnk_A Filamin-A; FLNA24, X-RA 99.0 5.6E-10 1.9E-14 65.5 4.7 27 2-28 62-88 (89)
49 1v05_A Filamin C; actin-bindin 99.0 7.1E-10 2.4E-14 65.9 4.8 27 2-28 69-95 (96)
50 2bp3_A Filamin A; structural p 99.0 8.2E-10 2.8E-14 65.8 4.8 28 2-29 67-94 (97)
51 2di8_A Filamin-B; beta-sandwic 98.9 5.3E-10 1.8E-14 68.5 3.3 30 1-30 71-100 (111)
52 2eea_A Filamin-B; beta-sandwic 98.9 1E-09 3.5E-14 67.3 4.0 30 2-31 82-111 (115)
53 2ds4_A Tripartite motif protei 98.9 1.6E-09 5.5E-14 65.4 4.3 29 2-30 83-111 (113)
54 2d7o_A Filamin-C; beta-sandwic 98.8 2.1E-09 7.2E-14 65.7 3.7 30 1-30 71-100 (111)
55 2eec_A Filamin-B; beta-sandwic 98.8 2.4E-09 8.4E-14 66.9 4.0 28 2-29 81-109 (125)
56 2nqc_A Filamin-C; immunoglobul 98.8 5.2E-09 1.8E-13 66.6 4.3 28 2-29 105-133 (138)
57 2dmb_A Filamin-B; beta-sandwic 98.8 7.2E-09 2.4E-13 64.6 4.3 29 2-30 75-103 (124)
58 2k7q_A Filamin-A; IG-like, ABP 98.7 7.4E-09 2.5E-13 68.0 4.0 29 2-30 158-186 (191)
59 4b7l_A Filamin-B; structural p 98.7 9E-09 3.1E-13 73.6 4.4 28 1-28 320-347 (347)
60 1qfh_A Protein (gelation facto 98.7 1.8E-08 6.3E-13 66.8 4.1 47 30-77 2-55 (212)
61 2k7p_A Filamin-A; IG-like, ABP 98.6 6E-08 2E-12 63.8 4.8 28 2-29 158-185 (188)
62 2di7_A BK158_1; beta-sandwich, 98.2 3.5E-07 1.2E-11 57.3 1.6 27 1-27 91-117 (124)
63 2di7_A BK158_1; beta-sandwich, 97.7 9.1E-06 3.1E-10 50.8 1.4 45 31-77 14-68 (124)
64 2dlg_A Filamin-B; beta-sandwic 96.9 0.00069 2.4E-08 40.6 2.9 33 44-77 10-42 (102)
65 2d7n_A Filamin-C; beta-sandwic 91.8 0.2 6.7E-06 29.3 3.5 27 51-78 8-34 (93)
66 2ee9_A Filamin-B; beta-sandwic 91.2 0.18 6.1E-06 29.7 2.9 27 51-78 16-42 (95)
67 2xzz_A Protein-glutamine gamma 89.1 2.3 7.8E-05 25.1 7.9 66 9-74 7-87 (102)
68 3tkv_A FDEC fragment B, attach 84.4 5.1 0.00017 28.7 7.5 61 2-64 263-324 (414)
69 3bwu_D FIMD, outer membrane us 79.9 1.7 5.7E-05 26.0 3.1 24 3-26 28-51 (125)
70 4b0m_A F1 capsule-anchoring pr 75.4 2.4 8.3E-05 26.0 2.9 21 4-24 28-48 (136)
71 3tkv_A FDEC fragment B, attach 74.9 18 0.00061 25.9 7.7 58 2-63 161-221 (414)
72 2c9r_A COPC, copper resistance 43.2 17 0.00059 21.0 2.4 21 2-22 73-96 (102)
73 2l3u_A YBBR family protein; be 43.1 11 0.00039 21.5 1.6 45 32-77 24-71 (98)
74 1lyq_A PCOC copper resistance 42.7 17 0.00059 21.1 2.4 21 2-22 75-98 (104)
75 2cdp_A Beta-agarase 1; carbohy 42.1 53 0.0018 20.1 4.7 26 4-30 77-102 (160)
76 1g0d_A Protein-glutamine gamma 41.3 70 0.0024 25.0 6.0 65 10-74 587-667 (695)
77 2q3z_A Transglutaminase 2; tra 39.3 1.3E+02 0.0046 23.3 7.4 65 10-74 589-670 (687)
78 1vjj_A Protein-glutamine gluta 39.3 1.3E+02 0.0046 23.3 7.7 66 9-74 595-676 (692)
79 2vzp_A Aocbm35, EXO-beta-D-glu 38.1 37 0.0013 19.7 3.4 26 4-29 49-74 (127)
80 2oxg_Z SOXZ protein; immunoglo 36.5 65 0.0022 18.8 6.1 21 55-77 76-96 (108)
81 2w3j_A Carbohydrate binding mo 36.3 39 0.0013 20.4 3.4 26 4-29 49-74 (145)
82 2w87_A Esterase D, XYL-CBM35; 34.7 44 0.0015 20.0 3.4 27 4-30 49-75 (139)
83 3fcg_A F1 capsule-anchoring pr 34.2 67 0.0023 18.4 5.4 43 33-77 25-71 (90)
84 2w47_A Lipolytic enzyme, G-D-S 34.1 45 0.0015 19.8 3.4 26 4-29 50-75 (144)
85 2r5o_A Putative ATP binding co 33.4 30 0.001 21.7 2.6 16 1-16 132-147 (188)
86 2kps_A Uncharacterized protein 33.2 8 0.00027 22.3 -0.2 25 54-78 46-72 (98)
87 3lyw_A YBBR family protein; st 31.2 70 0.0024 18.2 3.7 65 5-77 2-68 (90)
88 1ex0_A Coagulation factor XIII 30.3 73 0.0025 25.0 4.6 65 10-74 632-711 (731)
89 3isy_A Bsupi, intracellular pr 29.7 49 0.0017 19.9 2.9 17 3-19 90-106 (120)
90 3sk7_A Protein SEQA; sequestra 28.5 20 0.00067 21.9 0.9 12 15-26 71-82 (116)
91 3rfz_B Outer membrane usher pr 26.3 48 0.0017 26.0 3.0 20 3-22 28-47 (843)
92 3pe9_A Fibronectin(III)-like m 25.3 1E+02 0.0035 17.6 3.9 42 35-77 33-74 (98)
93 2dle_A Receptor-type tyrosine- 24.6 81 0.0028 17.6 3.2 8 53-60 87-94 (104)
94 1uy4_A Endo-1,4-beta-xylanase 22.9 76 0.0026 19.1 3.0 22 56-77 72-93 (145)
95 1j3e_A SEQA protein; protein-D 22.6 29 0.001 21.0 0.9 12 15-26 70-81 (115)
96 3h6q_A Macrocypin 1A; mycocypi 22.4 52 0.0018 21.1 2.1 17 1-17 1-17 (169)
97 2kq1_A BH0266 protein; solutio 22.3 55 0.0019 19.0 2.2 24 54-77 55-81 (119)
98 2kxy_A Uncharacterized protein 21.7 46 0.0016 18.7 1.6 32 9-43 12-43 (100)
99 1lrr_A SEQA protein; protein-D 21.6 31 0.0011 21.4 0.9 12 15-26 86-97 (131)
100 1od3_A Putative xylanase; hydr 21.4 80 0.0027 19.6 2.9 22 56-77 94-115 (168)
101 2l7y_A Putative endo-beta-N-ac 20.8 1.1E+02 0.0038 17.8 3.2 25 3-30 59-83 (98)
102 3gmg_A Uncharacterized protein 20.3 91 0.0031 19.9 3.0 18 12-30 93-110 (170)
No 1
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.86 E-value=3.4e-23 Score=131.06 Aligned_cols=72 Identities=42% Similarity=0.656 Sum_probs=67.8
Q ss_pred ceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 5 RRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 5 ~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.|-|+|+|+|||+||+||||+++|.+..||++|+++|+||+.+. .++++.|+|+|++||.+.|.|.|+||++
T Consensus 2 ~~~~~i~v~~~g~~v~gsPf~v~v~~~~d~~~~~~~G~GL~~~~-vg~~~~F~V~t~dag~~~l~v~v~gp~~ 73 (131)
T 2di9_A 2 SSGSSGDVTYDGHPVPGSPYTVEASLPPDPSKVKAHGPGLEGGL-VGKPAEFTIDTKGAGTGGLGLTVEGPCE 73 (131)
T ss_dssp CCCCCCCCCCCCCCCSSCTTSCSCCCCCCGGGCEEESHHHHEEE-TTSCEEEEEECTTTCSSCEEEEECSSSC
T ss_pred CCcEEEEEEECCEECCCCCEEEEEeCCCCccccEEECCccCccc-cCCeEEEEEEEcCCCCCeeEEEEEecCC
Confidence 47799999999999999999999988899999999999999987 5689999999999999999999999986
No 2
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=99.85 E-value=9.3e-21 Score=125.62 Aligned_cols=75 Identities=28% Similarity=0.561 Sum_probs=70.2
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.|.++|.|+|+|+|+|+||+||||+++|.+ .||++|+++|+||+.+. .++++.|+|++++||.+.|.|.|+||++
T Consensus 65 ~P~~~G~h~i~V~~~g~~i~gSPf~~~V~~-~d~~~~~~~G~GL~~~~-vg~~~~F~V~t~dag~g~l~v~I~gp~~ 139 (188)
T 2k7p_A 65 APSEAGLHEMDIRYDNMHIPGSPLQFYVDY-VNCGHVTAYGPGLTHGV-VNKPATFTVNTKDAGEGGLSLAIEGPSK 139 (188)
T ss_dssp CCCCCEEEEEEEEETTEECTTCSEEEEECC-TTSSSCEEESSTTTEEE-TTSCEEEEEECTTCCSSCEEEEEECSSC
T ss_pred EccccEeEEEEEEECCEecCCCCEEEEecc-cCCcceEEeCcccccce-eCccEEEEEEeCCCCCCCeEEEEeCCCC
Confidence 378999999999999999999999999976 79999999999999987 5679999999999999999999999986
No 3
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=99.84 E-value=5.9e-21 Score=126.35 Aligned_cols=76 Identities=34% Similarity=0.519 Sum_probs=70.4
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecC--CCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSG--APDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~--~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.|.++|.|+|+|+|+|+||+||||+++|.+ ..||++|+++|+||+.+. .++++.|+|++++||.+.|.|.|+||++
T Consensus 62 tP~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~~~d~~~~~~~G~Gl~~~~-~g~~~~F~V~t~dag~g~l~v~V~gp~~ 139 (191)
T 2k7q_A 62 VPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGH-TFEPAEFIIDTRDAGYGGLSLSIEGPSK 139 (191)
T ss_dssp CCSSSEEEEEEEEETTEECTTCSEEEEECGGGTTCGGGCEEESGGGTEEE-SSSCEEEEEECGGGCSEEEEEEEEESSC
T ss_pred EccCCEeEEEEEEECCEECCCCCEEEEEcccCCCCcceEEEeCcccccee-cCCcEEEEEEeCCCCCCceEEEEECCCC
Confidence 478999999999999999999999999975 479999999999999987 4678999999999999999999999986
No 4
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=99.84 E-value=8.4e-21 Score=132.02 Aligned_cols=76 Identities=37% Similarity=0.537 Sum_probs=70.6
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecC--CCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSG--APDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~--~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.|.+.|.|+|+|+|+|+||+||||+++|.+ ..||+||+++|+||+.+. .++++.|+|++++||.|.|.|.|+||++
T Consensus 162 ~P~e~G~h~v~V~~~g~~i~gsPf~~~V~~~~~~d~~k~~~~G~GL~~~~-~g~~~~F~I~~~dag~g~l~v~v~gp~~ 239 (288)
T 2j3s_A 162 VPAEMGTHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAE-AGVPAEFSIWTREAGAGGLAIAVEGPSK 239 (288)
T ss_dssp CCCSCEEEEEEEEETTEECTTCSEEEEESCCCCCCGGGCEEESGGGTCEE-TTBCEEEEEECCBSSSEEEEEEEEESSC
T ss_pred ecccceeeEEEEEECCeeCCCCCeEEEEeccCCCCcceEEEEcCCccceE-eCCceEEEEEeCCCCCCceEEEEeCCCC
Confidence 478999999999999999999999999986 369999999999999987 5689999999999999999999999975
No 5
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1.2e-19 Score=112.80 Aligned_cols=63 Identities=38% Similarity=0.544 Sum_probs=58.7
Q ss_pred CCEecCCCCeEEEecCCCCCCeEEEeCCCcccc-eeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 15 EGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHG-VLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 15 ~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g-~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.++||+||||+++|.+..||++|+++|+||+.+ +..++++.|+|+|++||.+.|+|.|.+|+|
T Consensus 2 ~~~~i~gSPf~v~v~~~~d~~~~~~~G~Gl~~~~v~~g~~~~F~V~~~daG~~~l~v~v~~p~g 65 (119)
T 2e9j_A 2 SSGSSGRSPFKVKVLPTYDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQITDQEG 65 (119)
T ss_dssp CCCCCCCCSSCCCCCCSCCGGGEEEESGGGCSSCEETTSCEEEEEEESSCCCCCEECCEECTTC
T ss_pred CCCccCCcCEEEEECCCCCcceeEEECCCcccCceecCCcEEEEEEECCCCCCeEEEEEECCCC
Confidence 478999999999999989999999999999986 556789999999999999999999999987
No 6
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=99.75 E-value=6.4e-19 Score=112.80 Aligned_cols=76 Identities=32% Similarity=0.461 Sum_probs=43.6
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCCC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKGF 78 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g~ 78 (78)
|+.-.|.|+|+|+| |++|+++++...-....||++|+++|+||+.+. .++++.|+|+|++||.+.|+|.|+||++.
T Consensus 13 ~~~~~G~h~v~v~~-g~~v~~~~~V~~~~~~~D~skv~a~G~GL~~g~-~g~~~~F~V~t~daG~g~l~v~I~gPs~~ 88 (138)
T 2nqc_A 13 MGRGSGSHMASMTG-GQQMGRGSRVGEQSQAGDPGLVSAYGPGLEGGT-TGVSSEFIVNTLNAGSGALSVTIDGPSKV 88 (138)
T ss_dssp ------------------------------CCCGGGCEEESGGGTEEE-TTSCEEEEEECTTSCSCCEEEEEESSSCC
T ss_pred cCcCcceEEEEEEC-CCcCCCCEEECCCCCCCCchhcEEECCCccCcE-eCCCeEEEEEEcCCCCCcEEEEEECCCCC
Confidence 34568999999999 999999543221113579999999999999987 56899999999999999999999999974
No 7
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=3.9e-19 Score=109.91 Aligned_cols=62 Identities=35% Similarity=0.619 Sum_probs=58.0
Q ss_pred ECCEecCCCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 14 GEGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 14 ~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
+||+||+||||+++|.+ .||++|+++|+||+.+. .++++.|+|++++||.+.|.|.|++|++
T Consensus 2 ~~g~~i~gsPf~~~V~~-~d~~~~~~~G~GL~~~~-vg~~~~F~v~t~dag~~~l~v~v~~p~~ 63 (115)
T 2eea_A 2 SSGSSGPESPLQFYVNY-PNSGSVSAYGPGLVYGV-ANKTATFTIVTEDAGEGGLDLAIEGPSK 63 (115)
T ss_dssp CCCCCCCCCSSCCCCCC-TTSCCCEEESHHHHEEE-TTCCEEEEEECSSCCSSCEEEEEESSSC
T ss_pred CCCCCCCCCCEEEEEEC-CCcceeEEECCccCceE-cCCeEEEEEEcccCCCCceEEEEECCCC
Confidence 58999999999999976 79999999999999987 5679999999999999999999999986
No 8
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=99.74 E-value=4.4e-18 Score=118.70 Aligned_cols=76 Identities=24% Similarity=0.309 Sum_probs=70.4
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccC-------CCccceEEEEE
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRG-------AGAGQLTVRVR 73 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~-------aG~g~l~v~v~ 73 (78)
.|.++|.|+|+|+|+|+||+||||.++|.+..||++|+++|+||+.+. .++++.|+|++++ +|.+.|+|.|.
T Consensus 72 ~p~~~G~~~i~v~~~~~~i~gsPf~~~v~~~~d~~~~~~~G~gl~~~~-~g~~~~f~V~~~D~~G~~~~~g~~~~~v~i~ 150 (311)
T 1wlh_A 72 EPKEAGDYVINLTLDGDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVF-DNAPAEFTIFAVDTKGVARTDGGDPFEVAIN 150 (311)
T ss_dssp CCCSCSEEEEEEEESSSBCTTCSEEEEEECCBCTTTCCEESGGGTCEE-SSSCEEEEEECBBSSSSBCSSCCCCEEEEEE
T ss_pred EccCccceEEEEEECCEECCCCceEEEEccccccceeEEeccccceee-cCCCEEEEEEecCCCCCEEecCCCcEEEEEE
Confidence 378999999999999999999999999999899999999999999986 5689999999985 68889999999
Q ss_pred CCCC
Q psy5364 74 GPKG 77 (78)
Q Consensus 74 gP~g 77 (78)
+|+|
T Consensus 151 ~p~g 154 (311)
T 1wlh_A 151 GPDG 154 (311)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 9987
No 9
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=8.5e-18 Score=105.73 Aligned_cols=60 Identities=37% Similarity=0.617 Sum_probs=54.9
Q ss_pred ecCCCCeEEEecCC---CCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCCC
Q psy5364 18 DVPGSPFTVRVSGA---PDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKGF 78 (78)
Q Consensus 18 ~V~gSPf~v~V~~~---~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g~ 78 (78)
+|+||||+++|.+. .||++|+++|+||+.+. .++++.|+|+|++||.+.|+|.|+||++.
T Consensus 2 ~i~gSPf~~~V~~~~~~~d~~~v~a~G~GL~~~~-~g~~~~F~v~t~daG~~~l~v~i~gp~~~ 64 (125)
T 2eec_A 2 SSGSSGFKVRVGEPGQAGNPALVSAYGTGLEGGT-TGIQSEFFINTTRAGPGTLSVTIEGPSKV 64 (125)
T ss_dssp CCCCCCCCCCCCSCSCCCCTTTCEEEESTTTCEE-TTSCEEEEEECTTTCSCCEEEEEESSSCC
T ss_pred CcCCCCEEEEEeCCcccCCccceEEECCCcCccc-cCCcEEEEEEEcCCCCCcEEEEEECCCCC
Confidence 79999999999864 49999999999999987 56899999999999999999999999873
No 10
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.67 E-value=9.5e-18 Score=105.00 Aligned_cols=62 Identities=31% Similarity=0.564 Sum_probs=56.5
Q ss_pred CEecCCCCeEEEecCCCCCCeEEEeCCCccc-ceeceeceEEEEEccC---CCccceEEEEECCCC
Q psy5364 16 GVDVPGSPFTVRVSGAPDASKVRVYGPGIEH-GVLATFQSRFICDTRG---AGAGQLTVRVRGPKG 77 (78)
Q Consensus 16 g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~-g~~~~~~~~F~Id~~~---aG~g~l~v~v~gP~g 77 (78)
|+||+||||+++|.+..||++|+++|+||+. +...++++.|+|++++ +|.+.|+|.|.+|+|
T Consensus 3 ~~~vp~sPf~v~V~~~~d~s~~~~~G~Gl~~~~~~~g~~~~F~V~~~d~~~~G~~~~~v~i~~p~g 68 (128)
T 2dib_A 3 SGSSGHFPARVKVEPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAHIANPSG 68 (128)
T ss_dssp CCCCSCCCCCCCCCCSCCCCSCEEESHHHHTSSCCTTCCEEEEEECSSSCSSCCSCCCEECCCSSS
T ss_pred CCcCCCCCeEeEECCCCCcceeEEECCCccCCceEecccEEEEEEECCCCcCCCccEEEEEECCCC
Confidence 7899999999999999999999999999986 3446789999999997 788999999999987
No 11
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=99.63 E-value=1.4e-15 Score=101.56 Aligned_cols=65 Identities=14% Similarity=0.229 Sum_probs=60.0
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccC-------CCccceEEEEE
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRG-------AGAGQLTVRVR 73 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~-------aG~g~l~v~v~ 73 (78)
.|.++|.|+|+|+|+|+||+||||+++|.+..|++++++ +++.|+|++++ +|.+.|.|.|.
T Consensus 75 ~p~~~G~~~i~V~~~g~~i~gSPf~v~v~~~~~~~~~~~------------~~~~f~V~~~D~~G~~~~~G~~~l~v~i~ 142 (212)
T 1qfh_A 75 DAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSF------------GSFTFTVAAKNKKGEVKTYGGDKFEVSIT 142 (212)
T ss_dssp CCCSSEEEEEEEEETTEECBTCSEEEEEECCCCGGGCEE------------EEEEEEEECBCTTSSBCSSCCCCEEEEEE
T ss_pred ECcCcEEEEEEEEECCEecCCCcceEEEccCCCCCceEE------------EEEEEEEEEeccCCCEeecCCCcEEEEEE
Confidence 367899999999999999999999999999899999888 56899999988 89999999999
Q ss_pred CCCC
Q psy5364 74 GPKG 77 (78)
Q Consensus 74 gP~g 77 (78)
+|+|
T Consensus 143 ~p~g 146 (212)
T 1qfh_A 143 GPAE 146 (212)
T ss_dssp ECCS
T ss_pred CCCC
Confidence 9986
No 12
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=99.59 E-value=5.3e-15 Score=103.08 Aligned_cols=65 Identities=15% Similarity=0.271 Sum_probs=60.0
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEE---EccC----CCccceEEEEE
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFIC---DTRG----AGAGQLTVRVR 73 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~I---d~~~----aG~g~l~v~v~ 73 (78)
.|.++|.|+|+|+|+|+||+||||.++|.+..||++|++ +++.|+| |+++ +|.+.|.|.|.
T Consensus 174 ~p~~~G~y~i~V~~~g~~I~gSPF~v~V~~~~d~~~v~~------------~~~~f~V~~~D~~gn~~~~G~~~l~v~i~ 241 (311)
T 1wlh_A 174 DAPVEGNYNVNVTLRGNPIKNMPIDVKCIEGANGEDSSF------------GSFTFTVAAKNKKGEVKTYGGDKFEVSIT 241 (311)
T ss_dssp CCCSSEEEEEEEEETTEECTTCSCEEEEECCCCGGGCEE------------EEEEEEEECBCTTSSBCSSCCSCEEEEEE
T ss_pred ECCCCEEEEEEEEECCEECCCCCEEEEECCCCCCCceEE------------EeEEEEEEEeccCCCeeecCCCcEEEEEE
Confidence 367899999999999999999999999999899999998 4679999 8888 99999999999
Q ss_pred CCCC
Q psy5364 74 GPKG 77 (78)
Q Consensus 74 gP~g 77 (78)
+|+|
T Consensus 242 ~p~g 245 (311)
T 1wlh_A 242 GPAE 245 (311)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 9986
No 13
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=99.57 E-value=1.3e-15 Score=94.54 Aligned_cols=56 Identities=41% Similarity=0.543 Sum_probs=51.9
Q ss_pred CCCeEEEecCC--CCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 21 GSPFTVRVSGA--PDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 21 gSPf~v~V~~~--~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
||||+++|.+. .||++|+++|+||+.+. .++++.|+|++++||.+.|.|.|++|++
T Consensus 3 gSPf~~~V~~~~~~da~~~~a~G~GL~~~~-vg~~~~F~v~t~dag~~~l~v~v~~p~~ 60 (119)
T 2k9u_A 3 PEFFQFTVGPLGEGGAHKVRAGGTGLERGV-AGVPAEFSIWTREAGAGGLSIAVEGPSK 60 (119)
T ss_dssp CCSCSSSSSSCCCSTTTTCEEESSTTTCEE-TTCEEEEEEECCSSCSEEEEEEEESSSC
T ss_pred CcCEEEEECCCCCCCcceeEEECCccCceE-cCCeEEEEEEECCCCCCcEEEEEeCCCC
Confidence 89999999864 69999999999999987 5679999999999999999999999986
No 14
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.55 E-value=4.2e-15 Score=91.61 Aligned_cols=54 Identities=43% Similarity=0.670 Sum_probs=48.9
Q ss_pred CCCeEEEecCCCCCCeEEEeCCCcccc-eeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 21 GSPFTVRVSGAPDASKVRVYGPGIEHG-VLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 21 gSPf~v~V~~~~d~~kv~v~GpGL~~g-~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
||||.... .||++|+++|+||+.+ +++++++.|+|++++||.+.|+|.|.+|+|
T Consensus 1 gspf~~~~---~d~~k~~~~G~Gl~~~~v~~~~~~~F~V~~~daG~~~l~V~v~~p~g 55 (115)
T 2d7m_A 1 GSSGSSGA---HDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEG 55 (115)
T ss_dssp CCCCCCCS---CCGGGEEEESSTTCSSCEESSSCEEEEEEESSSCSSCEEEEEECTTS
T ss_pred CCCCCCCC---CCcceeEEECCCccccccccCCcEEEEEEECCCCCCEEEEEEECCCC
Confidence 79997655 8999999999999974 556889999999999999999999999986
No 15
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.48 E-value=3.4e-14 Score=87.25 Aligned_cols=40 Identities=30% Similarity=0.241 Sum_probs=38.6
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYG 41 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~G 41 (78)
|.++|.|+|+|+|+|+||+||||+++|.+..|++||+++|
T Consensus 74 p~~~G~y~i~V~~~g~~V~gSPf~v~v~~~~d~skv~~~G 113 (113)
T 2dia_A 74 PLTAGMYTLTMKYGGELVPHFPARVKVEPAVDTSSGPSSG 113 (113)
T ss_dssp CSSCEEEEEEEEETTEECTTCSEEEEEECCCCSSCCCCCC
T ss_pred eCCCccEEEEEEECCEECCCCCEEEEEcccCCcceeEEeC
Confidence 6789999999999999999999999999999999999997
No 16
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.47 E-value=2e-14 Score=88.25 Aligned_cols=53 Identities=34% Similarity=0.428 Sum_probs=48.3
Q ss_pred CCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 21 GSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 21 gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
||||...+ .||++|+++||||+.+. .++++.|+|+|++||.+.|+|.|.+|+|
T Consensus 1 ~~~~~~~~---~dp~kv~~~G~GL~~~~-~g~~~~F~V~~~daG~~~l~v~i~~~~g 53 (113)
T 2dia_A 1 GSSGSSGP---FDPSKVVASGPGLEHGK-VGEAGLLSVDCSEAGPGALGLEAVSDSG 53 (113)
T ss_dssp CCCCCCCC---CCGGGEEEESGGGTCEE-TTCCCCEEEEESSCCSCCEEEEEEETTT
T ss_pred CCCCCCCC---CCceeeEEECCCcCCee-cCCCEEEEEEECCCCCccEEEEEECCCC
Confidence 79998655 89999999999999986 5689999999999999999999999876
No 17
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.46 E-value=4.6e-14 Score=86.88 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=38.9
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYG 41 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~G 41 (78)
.|.++|.|+|+|+|+|+||+||||+++|.+..||+||+++|
T Consensus 75 ~p~~~G~y~i~V~~~g~~I~gSPF~v~v~~~~d~~k~~v~G 115 (115)
T 2d7m_A 75 LPDMSGRYTITIKYGGDEIPYSPFRIHALPTGDASSGPSSG 115 (115)
T ss_dssp CCCSCEEEEEEEEESSCBCTTCSEEEEEECCSSCSSSCCCC
T ss_pred EeCCCceEEEEEEECCEECCCCCEEEEEeeCCCcceEEEeC
Confidence 37789999999999999999999999999999999999987
No 18
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.44 E-value=4.7e-14 Score=86.03 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=39.1
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYG 41 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~G 41 (78)
.|.++|.|.|+|+|+|+||+||||+++|.+..|+++++|+|
T Consensus 62 tP~e~G~h~v~V~~~g~~I~GSPF~v~V~~~~~~~~~kv~g 102 (102)
T 2dlg_A 62 VPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGSGPSSG 102 (102)
T ss_dssp CCCTTCEEEEEEESSSSBCSSCSEEEEBCCCCCCCCCCCCC
T ss_pred EecCCEeEEEEEEECCEeCCCCCeEEEECCCCCCCceEccC
Confidence 47899999999999999999999999999999999999987
No 19
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.44 E-value=4.6e-14 Score=88.13 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=39.1
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYG 41 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~G 41 (78)
.|.++|.|+|+|+|+|+||+||||+++|.+..||+||+++|
T Consensus 88 ~p~~~G~~~i~V~~~g~~I~gSPF~v~v~~~~d~skv~~~G 128 (128)
T 2dib_A 88 TPFEKGLHVVEVTYDDVPIPNSPFKVAVTEGCQPSSGPSSG 128 (128)
T ss_dssp CCSSCSEEEEEEBSSSCBCTTCSEEEECCCCCCCCCCCCCC
T ss_pred EeCCCEeEEEEEEECCEECCCCCEEEEEeeCCCceEEEEeC
Confidence 47899999999999999999999999999999999999997
No 20
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.42 E-value=1.6e-13 Score=83.74 Aligned_cols=54 Identities=43% Similarity=0.657 Sum_probs=46.9
Q ss_pred CCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 21 GSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 21 gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
||+.... ..||++|+++|+||+.++.+++++.|+|+|++||.+.|+|.|.+|+|
T Consensus 1 ~~~~~~~---~~d~sk~~v~G~Gl~~~v~~~~~~~F~V~~~~aG~~~l~V~i~~p~g 54 (108)
T 2dj4_A 1 GSSGSSG---VVDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGPRG 54 (108)
T ss_dssp CCCCCCC---CCCTTSCEEESTTTSSCCBTTSCEEEEEECTTTCSCCEEEEEECSSS
T ss_pred CCCCCCC---CcccceeEEECCCcCcCccCCccEEEEEEECCCCCceEEEEEECCCC
Confidence 3554433 38999999999999998666789999999999999999999999987
No 21
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.42 E-value=9.1e-14 Score=87.56 Aligned_cols=40 Identities=25% Similarity=0.282 Sum_probs=38.4
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYG 41 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~G 41 (78)
|.++|.|.|+|+|+|+||+||||+++|.+..||+||+++|
T Consensus 92 p~~~G~y~I~V~~~g~~I~gSPF~v~V~~~~d~~kv~~~G 131 (131)
T 2di9_A 92 PTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSSGPSSG 131 (131)
T ss_dssp CSSSSEEEEEEEESSCBCTTCSEEEEEECCCCCCCSSCCC
T ss_pred eCCCeeEEEEEEECCEECCCcCEEEEECCCCCcceeEEEC
Confidence 6789999999999999999999999999999999999987
No 22
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.41 E-value=5.3e-14 Score=86.48 Aligned_cols=53 Identities=34% Similarity=0.616 Sum_probs=49.1
Q ss_pred CCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 21 GSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 21 gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
||||.++. .||++|+++|+||+.+. .++++.|+|+|++||.+.|.|.|++|++
T Consensus 1 ~~~~~~~~---~dp~~~~~~G~GL~~~~-vg~~~~F~V~t~dag~~~l~v~v~gp~~ 53 (111)
T 2d7o_A 1 GSSGSSGA---INSRHVSAYGPGLSHGM-VNKPATFTIVTKDAGEGGLSLAVEGPSK 53 (111)
T ss_dssp CCSCCCCC---SCCCCCEEESHHHHEEE-TTSCEEEEEECTTTCSSCBCCEEESSSC
T ss_pred CCCccccc---CcccccEEECCccCceE-cCCCEEEEEEECCCCCCcEEEEEECCCC
Confidence 79998877 89999999999999987 5679999999999999999999999985
No 23
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.38 E-value=7.1e-14 Score=86.82 Aligned_cols=55 Identities=25% Similarity=0.491 Sum_probs=47.0
Q ss_pred EECCEecCCCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 13 EGEGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 13 ~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
+|+|+||+||||+++|. |+++ .|+... .++++.|+|++++||.++|+|.|.+|+|
T Consensus 2 ~~~g~~IpGSPF~~~v~---~~~~------~~~~~~-vg~~~~f~v~~~~ag~~~l~v~v~~PsG 56 (116)
T 2dmc_A 2 SSGSSGIPGSPFTAKIT---DDSR------RCSQVK-LGSAADFLLDISETDLSSLTASIKAPSG 56 (116)
T ss_dssp CCCSSCCCCCCSSCCCC---CCCC------SSCCCC-TTSCEEEECCCSCCCSTTBCCEEECTTS
T ss_pred ccCCeECCCCCEEEEEc---CCCc------cccccc-cCCceEEEEEecCCCCCCEEEEEECCCC
Confidence 58999999999999994 5554 255554 4679999999999999999999999997
No 24
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.35 E-value=4e-13 Score=83.38 Aligned_cols=38 Identities=16% Similarity=0.198 Sum_probs=35.2
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCC--CCCCeEE
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGA--PDASKVR 38 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~--~d~~kv~ 38 (78)
.|.++|.|+|+|+|+|+||+||||+++|.+. .||+||+
T Consensus 76 tP~e~G~h~v~V~~~g~~I~GSPF~v~V~~~~~gdaskv~ 115 (116)
T 2dmc_A 76 IPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDSGPSS 115 (116)
T ss_dssp CCCSCEEEEEECBBSSSBCTTCSEEEEECCSSSCSSSSCC
T ss_pred EeCCCeeEEEEEEECCEECCCCCeEEEEecCCCCCccccC
Confidence 4789999999999999999999999999875 7999986
No 25
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=99.33 E-value=1.2e-12 Score=78.92 Aligned_cols=47 Identities=36% Similarity=0.569 Sum_probs=43.1
Q ss_pred CCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCCC
Q psy5364 31 APDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKGF 78 (78)
Q Consensus 31 ~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g~ 78 (78)
..||+||+++||||+.+. .++++.|+|+|++||.+.|+|.|.+|+|.
T Consensus 5 ~~d~skv~~~GpGL~~~~-vg~~~~F~V~~~~aG~~~l~v~i~~~~g~ 51 (100)
T 3rgh_A 5 PFDASKVKCSGPGLERAT-AGEVGQFQVDCSSAGSAELTIEICSEAGL 51 (100)
T ss_dssp CCCGGGCEEESGGGTEEE-TTSCEEEEEECTTSCSCCEEEEEECTTSC
T ss_pred CcccccCEEECCCcCCeE-cCCcEEEEEEECCCCCceEEEEEECCCCC
Confidence 479999999999999986 57899999999999999999999999873
No 26
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.32 E-value=1.2e-12 Score=80.47 Aligned_cols=53 Identities=40% Similarity=0.643 Sum_probs=46.4
Q ss_pred CCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 21 GSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 21 gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
||+.+..+ .||++|+++|+||+.+. .++++.|+|+|++||.+.|.|.|+||++
T Consensus 1 ~~~~~~~~---~d~~~~~v~G~GL~~~~-vg~~~~F~V~t~dag~g~l~v~v~gp~~ 53 (111)
T 2di8_A 1 GSSGSSGI---GDARRAKVYGRGLSEGR-TFEMSDFIVDTRDAGYGGISLAVEGPSK 53 (111)
T ss_dssp CCCCSCCB---CCGGGCEEEESTTTEEE-TTCCEEEEEECTTTCBCCEEEEEESSSC
T ss_pred CCccccCC---CCCceEEEECCCccceE-cCCCEEEEEEECCCCCCceEEEEEcCCC
Confidence 45555444 89999999999999987 5689999999999999999999999986
No 27
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=99.30 E-value=4.8e-12 Score=87.80 Aligned_cols=73 Identities=19% Similarity=0.248 Sum_probs=48.9
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeCCCcc----cceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYGPGIE----HGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~----~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
|.++|.|.|+|+|+|+||+||||.++|.+. .+++.+..++. ... .+.+..|.+++++++.++|++.|.+|+|
T Consensus 67 p~~~G~y~i~V~~~g~~i~gSPf~v~v~~~---~~v~~~~~~~~~~~~~~~-vg~~~~~~~~~~~~~~~~l~~~V~~psG 142 (288)
T 2j3s_A 67 PTEPGNYIINIKFADQHVPGSPFSVKVTGE---GRVKESITRRRRAPSVAN-VGSHCDLSLKIPEISIQDMTAQVTSPSG 142 (288)
T ss_dssp CSSCEEEEEEEEETTEECTTCSEEEEEESC---CSEEEEEEEEECCCCCCS-CCSSCCC--------CCCEEEEEECTTC
T ss_pred CCCCeEEEEEEEECCEECCCCCEEEEEcCC---ccccceecccccCCCccc-cCcceEEEEEcCCCCcCceEEEEECCCC
Confidence 678999999999999999999999999654 33433332221 112 2356788999999999999999999997
Q ss_pred C
Q psy5364 78 F 78 (78)
Q Consensus 78 ~ 78 (78)
.
T Consensus 143 ~ 143 (288)
T 2j3s_A 143 K 143 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 28
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.29 E-value=1.1e-12 Score=79.71 Aligned_cols=52 Identities=35% Similarity=0.554 Sum_probs=46.5
Q ss_pred EEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCCC
Q psy5364 26 VRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKGF 78 (78)
Q Consensus 26 v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g~ 78 (78)
+.|....||++|+++|+||+.+. .++++.|+|++++||.|.|.|.|+||++.
T Consensus 3 v~v~~~~d~~~~~~~G~GL~~~~-vg~~~~F~v~t~dag~g~l~v~v~gp~~~ 54 (105)
T 2dic_A 3 SGSSGGCQPSRVQAQGPGLKEAF-TNKPNVFTVVTRGAGIGGLGITVEGPSES 54 (105)
T ss_dssp CSSCSCCCTTSCEEESHHHHCEE-TTCCEEEEEECTTTCSSCEEEEEESSSCC
T ss_pred eEEccCCCccceEEECCccccee-cCCcEEEEEEEccCCCCceEEEEECCCCC
Confidence 45667789999999999999987 56799999999999999999999999863
No 29
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=99.29 E-value=2.3e-12 Score=92.16 Aligned_cols=50 Identities=36% Similarity=0.581 Sum_probs=44.3
Q ss_pred cCCCCCCeEEEeCCCccc-ceeceeceEEEEEccCCCccceEEEEECCCCC
Q psy5364 29 SGAPDASKVRVYGPGIEH-GVLATFQSRFICDTRGAGAGQLTVRVRGPKGF 78 (78)
Q Consensus 29 ~~~~d~~kv~v~GpGL~~-g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g~ 78 (78)
.+..||+||+|+||||+. +...++|+.|+|||++||.|.|.|.|+||+|.
T Consensus 249 ~~k~~pskv~a~GpGle~~g~~vg~p~~F~Vdt~~AG~g~l~v~V~~P~G~ 299 (347)
T 4b7l_A 249 KPKLNPKKARAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEGN 299 (347)
T ss_dssp CCSCCGGGCEEESGGGSSSCCCTTSCEEEEEECTTTCSCCEEEEEECTTSC
T ss_pred cccccccceeEEeccccccCceeCCEEEEEEEeCCCCCCceEEEEECCCCC
Confidence 345799999999999984 44568899999999999999999999999873
No 30
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=99.27 E-value=2.7e-12 Score=76.51 Aligned_cols=45 Identities=38% Similarity=0.592 Sum_probs=42.3
Q ss_pred CCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 32 PDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 32 ~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.||+||+++|+||+.+. .++++.|+|+|++||.+.|.|.|++|++
T Consensus 4 ~d~~k~~~~G~Gl~~~~-~g~~~~F~v~~~~aG~~~l~v~v~~p~~ 48 (96)
T 1v05_A 4 SDASKVVTRGPGLSQAF-VGQKNSFTVDCSKAGTNMMMVGVHGPKT 48 (96)
T ss_dssp BCGGGCEEESGGGTBCC-TTSCEEEEEECTTSBSCCEEEEEECSSS
T ss_pred CCchheEEECCCcCCEE-cCCCEEEEEEEeCCCCCcEEEEEECCCC
Confidence 69999999999999986 5689999999999999999999999987
No 31
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.27 E-value=3.1e-12 Score=76.87 Aligned_cols=40 Identities=15% Similarity=0.254 Sum_probs=36.5
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYG 41 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~G 41 (78)
.|.++|.|+|+|+|+|+||+||||+++|.+ .|.++|+|++
T Consensus 53 tP~e~G~h~v~V~~~g~~I~GSPF~v~V~~-~~~~~v~~~~ 92 (93)
T 2d7n_A 53 APTEKGLHQMGIKYDGNHIPGSPLQFYVDA-INSRHSGPSS 92 (93)
T ss_dssp CCSSCEEEEEEEEESSSCCTTCSEEEEECB-CCSCCCCCCC
T ss_pred EccCCEEEEEEEEECCEeCCCCCeEEEEec-CCCceEEecC
Confidence 378999999999999999999999999976 6889999876
No 32
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=99.24 E-value=7.2e-12 Score=74.87 Aligned_cols=45 Identities=36% Similarity=0.759 Sum_probs=40.2
Q ss_pred CCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 32 PDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 32 ~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.||++|+++|+||+.+. .++++.|+|++++||.+.|.|.|++|++
T Consensus 4 vdp~~~~~~G~Gl~~~~-vg~~~~F~v~t~dag~~~l~v~v~~p~~ 48 (97)
T 2bp3_A 4 VNCGHVTAYGPGLTHGV-VNKPATFTVNTKDAGEGGLSLAIEGPSK 48 (97)
T ss_dssp CC--CCEEESGGGTEEE-TTSCEEEEEECTTCCSEEEEEEEEESSC
T ss_pred cccceeEEECCCCCCEE-cCCcEEEEEEECCCCCCcEEEEEECCCC
Confidence 69999999999999987 5679999999999999999999999986
No 33
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.23 E-value=1.1e-11 Score=77.47 Aligned_cols=49 Identities=41% Similarity=0.606 Sum_probs=44.8
Q ss_pred cCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 29 SGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 29 ~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.+..||+||+++|+||+.++..++++.|+|+|++||.+.|+|.|.+|+|
T Consensus 6 ~~~~Dask~~v~G~GL~~~v~vg~~~~F~V~a~daG~~~l~V~I~~p~g 54 (124)
T 2dmb_A 6 SGTGDASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDG 54 (124)
T ss_dssp CCCCCSTTCEEESGGGSSEEESSSEEEEEEECSSSCSCCEEEEEECTTS
T ss_pred cccCCccceEEECCCccCccccCCcEEEEEEEecCCCCcEEEEEECCCC
Confidence 4568999999999999988756789999999999999999999999987
No 34
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=99.22 E-value=4.3e-12 Score=78.55 Aligned_cols=39 Identities=23% Similarity=0.327 Sum_probs=35.5
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecCC-CCCCeEEEe
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSGA-PDASKVRVY 40 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~-~d~~kv~v~ 40 (78)
|.++|.|.|+|+|+|+||+||||.++|.+. .|++||+++
T Consensus 79 p~~~G~y~I~V~~~g~~I~gSPF~v~v~~~~~d~~k~~v~ 118 (119)
T 2k9u_A 79 VQEPGDYEVSIKFNDEHIPDSPFVVPVASLSDDARRLTVT 118 (119)
T ss_dssp CCSSEEEEEEEEETSCBCSSCSEEEEEESSCSSCCTTTTC
T ss_pred ECCCceEEEEEEECCEECCCCCEEEEEecCCCCccEEEEe
Confidence 678999999999999999999999999875 689998875
No 35
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=99.22 E-value=6.7e-12 Score=74.70 Aligned_cols=45 Identities=44% Similarity=0.620 Sum_probs=41.8
Q ss_pred CCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 32 PDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 32 ~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.||++|+++|+||+.+. .++++.|+|++++||.+.|.|.|+||++
T Consensus 1 ~d~~~~~~~G~Gl~~~~-~g~~~~F~v~~~dag~~~~~v~v~gp~~ 45 (94)
T 2w0p_A 1 GGAHKVRAGGPGLERAE-AGVPAEFSIWTREAGAGGLAIAVEGPSK 45 (94)
T ss_dssp CCGGGCEEESGGGTCEE-TTSCEEEEEECGGGCSCCEEEEEEESSC
T ss_pred CCCcEEEEECCCcCceE-cCCCEEEEEEEcCCCCCcEEEEEECCCC
Confidence 38999999999999997 5689999999999999999999999986
No 36
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.21 E-value=2.5e-11 Score=73.66 Aligned_cols=35 Identities=29% Similarity=0.504 Sum_probs=32.5
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDAS 35 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~ 35 (78)
+|.++|.|.|+|+|+|+||+||||.++|.+..||+
T Consensus 71 ~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~~~~p~ 105 (105)
T 2dic_A 71 IPFAPGDYDVNITYGGAHIPGSPFRVPVKDVVDPS 105 (105)
T ss_dssp CCSSCEEEEEEEEETTEECTTCSEEEEEECSCCCC
T ss_pred EeCCCeEEEEEEEECCEECCCCCEEEEEcccCCCC
Confidence 47899999999999999999999999999888875
No 37
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=2.6e-11 Score=73.45 Aligned_cols=46 Identities=46% Similarity=0.657 Sum_probs=42.8
Q ss_pred CCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 31 APDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 31 ~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
..||++|+++|+||+.+. .++++.|+|++++||.+.|.|.|++|++
T Consensus 8 ~~d~~~~~~~G~GL~~~~-vg~~~~F~v~t~dag~~~l~v~v~~p~~ 53 (105)
T 2ee6_A 8 EGGAHKVRAGGPGLERGE-AGVPAEFSIWTREAGAGGLSIAVEGPSK 53 (105)
T ss_dssp CCCGGGCEECCTTTSCEE-BTSEEEECEECSSSCCCCEEEEEESSSC
T ss_pred CCCCeeeEEECCCcCceE-cCCcEEEEEEECCCCCCcEEEEEECCCC
Confidence 479999999999999997 4679999999999999999999999986
No 38
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=99.16 E-value=4.1e-11 Score=72.94 Aligned_cols=35 Identities=26% Similarity=0.322 Sum_probs=32.3
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDAS 35 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~ 35 (78)
.|.++|.|.|+|+|+|+||+||||+++|.+..||+
T Consensus 74 ~p~~~G~y~i~V~~~g~~V~gSPF~v~V~~~~d~s 108 (108)
T 2dj4_A 74 TPSQEGPYMVSVKYADEEIPRSPFKVKVLPTYDAS 108 (108)
T ss_dssp CCSSCEEEEEEEEESSSBCTTCSEEEEEBCSSCCC
T ss_pred EeCCCeeEEEEEEECCEECCCCCEEEEEecccCCC
Confidence 36789999999999999999999999999888875
No 39
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=99.12 E-value=7e-11 Score=69.46 Aligned_cols=41 Identities=34% Similarity=0.478 Sum_probs=38.1
Q ss_pred eEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 36 KVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 36 kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
||+++|+||+.+. .++++.|+|+|++||.+.|+|.|.+|+|
T Consensus 1 k~~~~G~GL~~~~-vg~~~~F~v~~~~aG~~~l~v~v~~p~g 41 (89)
T 3cnk_A 1 KVVAKGLGLSKAY-VGQKSSFTVDCSKAGNNMLLVGVHGPRT 41 (89)
T ss_dssp CCEEESGGGTBCB-TTBCEEEEEECTTSCSCCEEEEEECSSS
T ss_pred CcEEECCCcCCeE-CCCCEEEEEEECcCCCCcEEEEEECCCC
Confidence 6899999999986 5689999999999999999999999987
No 40
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=5.6e-11 Score=71.97 Aligned_cols=53 Identities=17% Similarity=0.157 Sum_probs=45.1
Q ss_pred CCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCC-------ccceEEEEECCCC
Q psy5364 21 GSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAG-------AGQLTVRVRGPKG 77 (78)
Q Consensus 21 gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG-------~g~l~v~v~gP~g 77 (78)
|||++... .||++|+++|+||+.+. .++++.|+|+++++. ...|+|.|.+|++
T Consensus 1 ~~~~~~~~---~dp~~~~~~G~Gl~~~~-~g~~~~F~V~~~d~~G~~~~~Gg~~~~v~i~~p~~ 60 (113)
T 2ds4_A 1 GSSGSSGE---VDPAKCVLQGEDLHRAR-EKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDK 60 (113)
T ss_dssp CCCCCSSS---BCTTTCEEECTTTTEEE-TTCCEEEEEECBBTTSSBCCCCCCCEEEEEEESSC
T ss_pred CCccccCC---CcCCEeEEECCCcCcee-cCCcEEEEEEEECCCCCCcccCCceEEEEEEecCC
Confidence 68887655 89999999999999876 568999999999883 4479999999875
No 41
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=1.4e-10 Score=71.57 Aligned_cols=35 Identities=29% Similarity=0.432 Sum_probs=32.1
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCCCCCC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGAPDAS 35 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~ 35 (78)
.|.++|.|+|+|+|+|+||+||||+++|.+..||+
T Consensus 85 ~p~~~G~y~i~V~~~g~~V~gSPF~v~v~~~~da~ 119 (119)
T 2e9j_A 85 IPDKTGRYMIGVTYGGDDIPLSPYRIRATQTGDAS 119 (119)
T ss_dssp CCCSCSEEEECCEESSCBCTTCSEEEEEECCCCCC
T ss_pred EeCCCEEEEEEEEECCEECCCCCEEEEEecCCCCC
Confidence 36789999999999999999999999999888875
No 42
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=3.2e-10 Score=68.61 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=29.1
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecCCCC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSGAPD 33 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~~d 33 (78)
|.++|.|.|+|+|+|+||+||||.++|.+..|
T Consensus 72 p~~~G~y~I~V~~~g~~I~gSPF~v~v~~~~~ 103 (105)
T 2ee6_A 72 AQEPGNYEVSIKFNDEHIPESPYLVPVIAPSD 103 (105)
T ss_dssp ESSCEEEEEEEEETTEECTTCSEEEEEECCCC
T ss_pred ECCCceEEEEEEECCEECCCcCEEEEEcCCCC
Confidence 57899999999999999999999999987654
No 43
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=3.5e-10 Score=68.17 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=28.5
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGA 31 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~ 31 (78)
.|.++|.|+|+|+|+|+||+||||+++|...
T Consensus 61 tP~e~G~h~v~V~~~G~~I~GSPF~v~V~~~ 91 (95)
T 2ee9_A 61 APTEVGLHEMHIKYMGSHIPESPLQFYVNYP 91 (95)
T ss_dssp CCCSSEEEEEEEEESSCBCTTCSEEEEECCT
T ss_pred EecCCEeEEEEEEECCEECCCCCeEEEEecc
Confidence 4789999999999999999999999999654
No 44
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=99.01 E-value=4.3e-10 Score=66.80 Aligned_cols=29 Identities=21% Similarity=0.312 Sum_probs=27.0
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
|.++|.|.|+|+|+|+||+||||.++|.+
T Consensus 64 p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 92 (94)
T 2w0p_A 64 VQEPGDYEVSVKFNEEHIPDSPFVVPVAS 92 (94)
T ss_dssp CSSCEEEEEEEEETTEECTTCSEEEEEEC
T ss_pred ECCCceEEEEEEECCEECCCCCEEEEEeC
Confidence 67899999999999999999999999954
No 45
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=99.01 E-value=1.9e-10 Score=70.80 Aligned_cols=52 Identities=25% Similarity=0.286 Sum_probs=45.7
Q ss_pred CCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 21 GSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 21 gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
||||...+ .||+||+++|.||.... .++++.|+|++++| .|+|+|.|.+|+|
T Consensus 1 ~~~~~~~~---~Daskv~~~g~~~~~~~-vg~~~~F~V~~~~a-~g~l~v~V~~P~g 52 (112)
T 2d7p_A 1 GSSGSSGS---DDARRLTVTSLQETGLK-VNQPASFAVQLNGA-RGVIDARVHTPSG 52 (112)
T ss_dssp CCSSCCCS---CGGGGCEECSSCSBCCC-TTCCEEEEEECTTC-CSCEEEEEECSSS
T ss_pred CCccccCC---CCcceeEEeCCCcCCcc-cCCcEEEEEEeCCC-CCCEEEEEECCCC
Confidence 68886554 89999999999998766 56899999999999 6899999999997
No 46
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=99.00 E-value=3.2e-10 Score=69.79 Aligned_cols=31 Identities=26% Similarity=0.524 Sum_probs=28.7
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecCC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSGA 31 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~ 31 (78)
+|.++|.|+|+|+|+|+||+||||+++|.+.
T Consensus 72 tP~~~G~h~v~V~~~g~~I~GSPF~v~V~~~ 102 (112)
T 2d7p_A 72 IPHENGVHSIDVKFNGAHIPGSPFKIRVGEQ 102 (112)
T ss_dssp CCSSCEEEEEEEEESSCBCTTCSEEEEECCC
T ss_pred EcCCCEeEEEEEEECCeEcCCCCEEEEEecC
Confidence 4789999999999999999999999999764
No 47
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=98.99 E-value=5.5e-10 Score=67.19 Aligned_cols=29 Identities=21% Similarity=0.233 Sum_probs=27.2
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
|.++|.|.|+|+|+|+||+||||+++|.+
T Consensus 71 p~~~G~y~i~V~~~g~~V~gSPf~v~V~p 99 (100)
T 3rgh_A 71 PLCPGAYTVTIKYGGQPVPNFPSKLQVEP 99 (100)
T ss_dssp CCSSEEEEEEEEETTEECTTCSEEEEEEC
T ss_pred eCCCeeEEEEEEECCEECCCCCEEEEEeC
Confidence 67899999999999999999999999965
No 48
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=98.99 E-value=5.6e-10 Score=65.52 Aligned_cols=27 Identities=26% Similarity=0.368 Sum_probs=25.8
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEe
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRV 28 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V 28 (78)
|.++|.|.|+|+|+|+||+||||+++|
T Consensus 62 p~~~G~y~i~V~~~g~~I~gSPF~v~V 88 (89)
T 3cnk_A 62 LKDKGEYTLVVKWGHEHIPGSPYRVVV 88 (89)
T ss_dssp CCSCEEEEEEEEETTEECTTCSEEEEE
T ss_pred ECCCccEEEEEEECCEECCCCCEEEEE
Confidence 678999999999999999999999987
No 49
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=98.97 E-value=7.1e-10 Score=65.91 Aligned_cols=27 Identities=33% Similarity=0.444 Sum_probs=25.8
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEe
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRV 28 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V 28 (78)
|.++|.|.|+|+|+|+||+||||+++|
T Consensus 69 p~~~G~y~i~V~~~g~~V~gSPF~v~V 95 (96)
T 1v05_A 69 VKEKGDYILIVKWGDESVPGSPFKVKV 95 (96)
T ss_dssp CSSCEEEEEEEEETTEECTTCSEEEEE
T ss_pred eCCCEEEEEEEEECCEECCCCCEEEEe
Confidence 678999999999999999999999987
No 50
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=98.96 E-value=8.2e-10 Score=65.81 Aligned_cols=28 Identities=32% Similarity=0.494 Sum_probs=26.5
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEec
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVS 29 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~ 29 (78)
|.++|.|.|+|+|+|+||+||||.++|.
T Consensus 67 p~~~G~y~i~V~~~g~~I~gSPF~v~v~ 94 (97)
T 2bp3_A 67 PVLPGDYSILVKYNEQHVPGSPFTARVT 94 (97)
T ss_dssp CSSCEEEEEEEEETTEECTTCSEEEEEE
T ss_pred eCCCCcEEEEEEECCEECCCcCEEEEEe
Confidence 6789999999999999999999999985
No 51
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=98.93 E-value=5.3e-10 Score=68.51 Aligned_cols=30 Identities=37% Similarity=0.500 Sum_probs=27.5
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
.|.++|.|.|+|+|+|+||+||||.++|.+
T Consensus 71 ~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 100 (111)
T 2di8_A 71 FPTVPGVYIVSTKFADEHVPGSPFTVKISG 100 (111)
T ss_dssp CCCSCSEEEEEEEESSCBCTTCSEEEEEEC
T ss_pred EeCCCeEEEEEEEECCEECCCCCEEEEECC
Confidence 368899999999999999999999999953
No 52
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=1e-09 Score=67.35 Aligned_cols=30 Identities=20% Similarity=0.403 Sum_probs=27.5
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecCC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSGA 31 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~~ 31 (78)
|.++|.|.|+|+|+|+||+||||+++|.+.
T Consensus 82 p~~~G~y~I~V~~~g~~I~gSPF~v~v~~~ 111 (115)
T 2eea_A 82 PTLPGDYSILVKYNDKHIPGSPFTAKITDD 111 (115)
T ss_dssp CSSCSCEEEEEEESSSBCTTCSEEEEEECC
T ss_pred eCCCeeEEEEEEECCEECCCCCEEEEEeCC
Confidence 678999999999999999999999999643
No 53
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=1.6e-09 Score=65.45 Aligned_cols=29 Identities=28% Similarity=0.244 Sum_probs=27.2
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
|.++|.|.|+|+|+|+||+||||+++|.+
T Consensus 83 p~~~G~y~i~V~~~g~~i~gSPF~v~v~~ 111 (113)
T 2ds4_A 83 PKEPGVYTVWVCIKEQHVQGSPFTVTVRR 111 (113)
T ss_dssp CSSSEEEEEEEEESSCBCTTCSEEEEEEC
T ss_pred eCCCeEEEEEEEECCEECCCCCEEEEEEc
Confidence 67899999999999999999999999965
No 54
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=98.84 E-value=2.1e-09 Score=65.75 Aligned_cols=30 Identities=23% Similarity=0.523 Sum_probs=27.6
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
.|.++|.|.|+|+|+|+||+||||.++|..
T Consensus 71 ~p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 100 (111)
T 2d7o_A 71 LPTAPGDYSIIVRFDDKHIPGSPFTAKITG 100 (111)
T ss_dssp CCSSCEEEEEECBBSSCBCTTCSEEEEEEC
T ss_pred EeCCCeEEEEEEEECCEECCCcCEEEEEEC
Confidence 368899999999999999999999999963
No 55
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=2.4e-09 Score=66.89 Aligned_cols=28 Identities=21% Similarity=0.401 Sum_probs=26.6
Q ss_pred CccceeeEEEEEECC-EecCCCCeEEEec
Q psy5364 2 SLRRRRINLRTEGEG-VDVPGSPFTVRVS 29 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g-~~V~gSPf~v~V~ 29 (78)
|+++|.|.|+|+|+| +||+||||+++|.
T Consensus 81 P~~~G~y~I~V~~~g~~hI~gSPF~v~v~ 109 (125)
T 2eec_A 81 PMAPGNYLISVKYGGPNHIVGSPFKAKVT 109 (125)
T ss_dssp CSSCEEEEEEEEESSSCBCTTCSEEEEEE
T ss_pred cCCCeEEEEEEEECCcccCCCCCeEEEEc
Confidence 789999999999999 9999999999995
No 56
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=98.79 E-value=5.2e-09 Score=66.59 Aligned_cols=28 Identities=21% Similarity=0.398 Sum_probs=26.7
Q ss_pred CccceeeEEEEEECC-EecCCCCeEEEec
Q psy5364 2 SLRRRRINLRTEGEG-VDVPGSPFTVRVS 29 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g-~~V~gSPf~v~V~ 29 (78)
|+++|.|.|+|+|+| +||+||||+++|.
T Consensus 105 P~~~G~y~I~Vk~~g~~hI~GSPF~v~V~ 133 (138)
T 2nqc_A 105 PMAPGNYLIAIKYGGPQHIVGSPFKAKVT 133 (138)
T ss_dssp CCSCEEEEEEEEESSSCBCTTCSEEEEEE
T ss_pred cCCCEEEEEEEEECCcccCCCCCeEEEEe
Confidence 789999999999999 9999999999985
No 57
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=98.76 E-value=7.2e-09 Score=64.62 Aligned_cols=29 Identities=31% Similarity=0.478 Sum_probs=27.2
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
|.++|.|.|+|+|+|+||+||||.++|.+
T Consensus 75 p~~~G~y~I~V~~~g~~I~gSPF~v~v~~ 103 (124)
T 2dmb_A 75 AAKPGTYVIYVRFGGVDIPNSPFTVMATD 103 (124)
T ss_dssp CSSCEEEEEEEEESSCBCTTCSEEEEEEC
T ss_pred cCCCEEEEEEEEECCEECCCCCeEEEEEc
Confidence 67899999999999999999999999964
No 58
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=98.74 E-value=7.4e-09 Score=68.02 Aligned_cols=29 Identities=31% Similarity=0.523 Sum_probs=27.0
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
|.++|.|.|+|+|+|+||+||||.++|.+
T Consensus 158 p~~~G~y~i~V~~~g~~I~gSPF~v~V~~ 186 (191)
T 2k7q_A 158 PTEPGNYIINIKFADQHVPGSPFSVKVTG 186 (191)
T ss_dssp ESSCEEEEEEEEETTEECTTCSEEEEEEC
T ss_pred eCCCceEEEEEEECCEECCCCCEEEEEcC
Confidence 67899999999999999999999999953
No 59
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=98.72 E-value=9e-09 Score=73.57 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=26.4
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEEe
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVRV 28 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~V 28 (78)
.|.++|.|+|+|+|+|+||+||||+++|
T Consensus 320 ~P~~~G~~~I~V~~~g~~IpgSPF~v~V 347 (347)
T 4b7l_A 320 LPKVTGLHKVTVLFAGQHISKSPFEVSV 347 (347)
T ss_dssp CCCSSSEEEEEEEETTEECTTCSEEEEC
T ss_pred EECCCEeEEEEEEECCEECCCCCEEeeC
Confidence 4889999999999999999999999986
No 60
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=98.66 E-value=1.8e-08 Score=66.81 Aligned_cols=47 Identities=23% Similarity=0.374 Sum_probs=41.6
Q ss_pred CCCCCCeEEEeCCCcccceeceeceEEEEEccC-------CCccceEEEEECCCC
Q psy5364 30 GAPDASKVRVYGPGIEHGVLATFQSRFICDTRG-------AGAGQLTVRVRGPKG 77 (78)
Q Consensus 30 ~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~-------aG~g~l~v~v~gP~g 77 (78)
+..||++|+++|+||+.+. .++++.|+|++++ +|.+.|+|.|.+|+|
T Consensus 2 ~~~d~~~~~~~G~Gl~~~~-~g~~~~F~V~~~D~~G~~~~~G~~~~~v~i~~p~g 55 (212)
T 1qfh_A 2 PAPSAEHSYAEGEGLVKVF-DNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDG 55 (212)
T ss_dssp CCBCTTTCEEESGGGTEEE-TTSCEEEEEECBBSSSCBCSSCCCCEEEEEECGGG
T ss_pred CCCCcccCEEECCCcCcee-cCCcEEEEEEEEcCCCCEeecCCCeEEEEEECCCC
Confidence 4579999999999999986 6789999999964 588899999999986
No 61
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=98.58 E-value=6e-08 Score=63.79 Aligned_cols=28 Identities=32% Similarity=0.494 Sum_probs=26.5
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEec
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVS 29 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~ 29 (78)
|.++|.|.|+|+|+|+||+||||.++|.
T Consensus 158 p~~~G~y~i~V~~~g~~I~gSPF~v~V~ 185 (188)
T 2k7p_A 158 PVLPGDYSILVKYNEQHVPGSPFTARVT 185 (188)
T ss_dssp CCSSEEEEEEEEETTEECTTCSEEEEEE
T ss_pred eCCCEEEEEEEEECCEECCCCCEEEEEe
Confidence 6789999999999999999999999985
No 62
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.22 E-value=3.5e-07 Score=57.31 Aligned_cols=27 Identities=19% Similarity=0.396 Sum_probs=24.6
Q ss_pred CCccceeeEEEEEECCEecCCCCeEEE
Q psy5364 1 MSLRRRRINLRTEGEGVDVPGSPFTVR 27 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~~V~gSPf~v~ 27 (78)
|+.++|.|+|+|+|+|+||++|||.++
T Consensus 91 ~~~~~g~~~I~V~~~~~hI~gSPf~v~ 117 (124)
T 2di7_A 91 MYASYKNLKVEIKFQGQHVAKSPYILK 117 (124)
T ss_dssp CCSCCSCCEEEEESSSCBCSSCSEECC
T ss_pred CCCCCCCEEEEEEECCEecCCCCEEEe
Confidence 677899999999999999999999763
No 63
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.72 E-value=9.1e-06 Score=50.79 Aligned_cols=45 Identities=24% Similarity=0.536 Sum_probs=34.6
Q ss_pred CCCCCeEEEeCCCcccceeceeceE-EEEEccC---------CCccceEEEEECCCC
Q psy5364 31 APDASKVRVYGPGIEHGVLATFQSR-FICDTRG---------AGAGQLTVRVRGPKG 77 (78)
Q Consensus 31 ~~d~~kv~v~GpGL~~g~~~~~~~~-F~Id~~~---------aG~g~l~v~v~gP~g 77 (78)
..||+||+++||||+.++ ..|+. |+|.+++ +|...|.|.|.+|.+
T Consensus 14 ~~dp~k~~~~GpGL~~~~--~~p~ryF~Iq~~D~~G~~~t~g~g~~~f~V~I~~~~~ 68 (124)
T 2di7_A 14 QLSPEKSEIWGPGLKADV--VLPARYFYIQAVDTSGNKFTSSPGEKVFQVKVSAPEE 68 (124)
T ss_dssp CEETTTCCCCSTTSSSSC--CSSCCCCBCCCEETTSCBCCSCCCSSCCEEEEECSSC
T ss_pred ccCccceEEECCcccccc--CCccEEEEEEEEeCCCCEeeeCCCCCceEEEEecCCC
Confidence 469999999999999553 35776 7776664 346789999998765
No 64
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=96.87 E-value=0.00069 Score=40.63 Aligned_cols=33 Identities=9% Similarity=0.113 Sum_probs=28.3
Q ss_pred cccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 44 IEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 44 L~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
++.+. .++++.|+|+++++|.++|+|.|.+|+|
T Consensus 10 ~~~~~-vG~~~~ftv~~~~ag~~~l~v~v~~P~G 42 (102)
T 2dlg_A 10 PSVAT-VGSICDLNLKIPEINSSDMSAHVTSPSG 42 (102)
T ss_dssp CCSBC-SSSCBCCEEECTTSCGGGCEEEEECTTS
T ss_pred ccccc-CCCceEEEEEecCCCCCCEEEEEECCCC
Confidence 34555 4578999999999999999999999998
No 65
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=91.82 E-value=0.2 Score=29.27 Aligned_cols=27 Identities=26% Similarity=0.201 Sum_probs=22.2
Q ss_pred eeceEEEEEccCCCccceEEEEECCCCC
Q psy5364 51 TFQSRFICDTRGAGAGQLTVRVRGPKGF 78 (78)
Q Consensus 51 ~~~~~F~Id~~~aG~g~l~v~v~gP~g~ 78 (78)
.+|..|.|.+.. |.++|++.|.+|+|.
T Consensus 8 ~~p~~f~i~~~~-g~~~l~v~V~~PsG~ 34 (93)
T 2d7n_A 8 LRPFNLVIPFAV-QKGELTGEVRMPSGK 34 (93)
T ss_dssp BCCEEEEECCCC-SSSCEEEEEECTTSC
T ss_pred cCCEEEEEEcCC-CCCCEEEEEECCCCC
Confidence 468899988864 568899999999973
No 66
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.19 E-value=0.18 Score=29.69 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=22.3
Q ss_pred eeceEEEEEccCCCccceEEEEECCCCC
Q psy5364 51 TFQSRFICDTRGAGAGQLTVRVRGPKGF 78 (78)
Q Consensus 51 ~~~~~F~Id~~~aG~g~l~v~v~gP~g~ 78 (78)
.+|..|.|.. ++|.++|++.|.+|+|.
T Consensus 16 ~rp~~f~i~~-~~g~~~ltv~V~~PsG~ 42 (95)
T 2ee9_A 16 FKPFDLVIPF-AVRKGEITGEVHMPSGK 42 (95)
T ss_dssp SCCCEEECSS-CCCTTSEEEEEECTTSC
T ss_pred ccCEEEEeec-CCCCCCEEEEEECCCCC
Confidence 3578898885 58899999999999973
No 67
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=89.08 E-value=2.3 Score=25.09 Aligned_cols=66 Identities=18% Similarity=0.124 Sum_probs=44.2
Q ss_pred EEEEEECCEecCCCCeEEEecC----CCCCC--eEEEeCCCcccce-------eceece--EEEEEccCCCccceEEEEE
Q psy5364 9 NLRTEGEGVDVPGSPFTVRVSG----APDAS--KVRVYGPGIEHGV-------LATFQS--RFICDTRGAGAGQLTVRVR 73 (78)
Q Consensus 9 ~i~V~~~g~~V~gSPf~v~V~~----~~d~~--kv~v~GpGL~~g~-------~~~~~~--~F~Id~~~aG~g~l~v~v~ 73 (78)
.|.|+.-|+.+-|.|+.++|.- ..-.. ..++.|+||.++. ..++.+ +|.+--+.+|...|.+.+.
T Consensus 7 ~i~I~v~g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~a~f~ 86 (102)
T 2xzz_A 7 MLSLTLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILNVGDIGGNETVTLRQSFVPVRPGPRQLIASLD 86 (102)
T ss_dssp EEEEEESSCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEEEECCBCTTCEEEEEEEECCCSCSSCCCEEEEE
T ss_pred cEEEEECCCcccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEEEcCcCCCCCEEEEEEEEecCcccceEEEEEEE
Confidence 5788999999999999999872 11223 4468899996432 111223 4444556788888888776
Q ss_pred C
Q psy5364 74 G 74 (78)
Q Consensus 74 g 74 (78)
.
T Consensus 87 s 87 (102)
T 2xzz_A 87 S 87 (102)
T ss_dssp C
T ss_pred C
Confidence 4
No 68
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=84.35 E-value=5.1 Score=28.72 Aligned_cols=61 Identities=5% Similarity=-0.018 Sum_probs=40.6
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecC-CCCCCeEEEeCCCcccceeceeceEEEEEccCCC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSG-APDASKVRVYGPGIEHGVLATFQSRFICDTRGAG 64 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~-~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG 64 (78)
..+.|.|.|...++|..+...|..+.+.+ ..+..++.+....-. ..++....|++-.+|+.
T Consensus 263 ~t~aG~~~Vta~v~g~~~~~~~~~vt~~a~~~~~~~s~l~~~~~~--~~a~~~~~vt~tv~D~~ 324 (414)
T 3tkv_A 263 GGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNKT--PTVKTTTELTFTMKDAY 324 (414)
T ss_dssp CSCCEEEEEEEEETTEECSSSCEEEEEECCSBCTTTCEEEESCSS--CBTTCEEEEEEECBBTT
T ss_pred CcccceEEEEEEECCEeccccceEEEEecCCccccceEEEeCCce--eecCCeEEEEEEEEeCC
Confidence 35789999999999999999999998865 345555554433321 11223456777666654
No 69
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=79.89 E-value=1.7 Score=26.05 Aligned_cols=24 Identities=8% Similarity=-0.105 Sum_probs=19.8
Q ss_pred ccceeeEEEEEECCEecCCCCeEE
Q psy5364 3 LRRRRINLRTEGEGVDVPGSPFTV 26 (78)
Q Consensus 3 ~~~G~~~i~V~~~g~~V~gSPf~v 26 (78)
+.||.|.++|.+||+.+......+
T Consensus 28 ~~PG~Y~vdI~vN~~~~~~~~i~f 51 (125)
T 3bwu_D 28 LPPGTYRVDIYLNNGYMATRDVTF 51 (125)
T ss_dssp SCSEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCcEEEEEEEECCeEccceEEEE
Confidence 469999999999999997665444
No 70
>4b0m_A F1 capsule-anchoring protein; protein transport, chaperone-usher pathway, PILI assembly; 1.80A {Yersinia pestis} PDB: 4b0e_A
Probab=75.43 E-value=2.4 Score=26.02 Aligned_cols=21 Identities=10% Similarity=-0.046 Sum_probs=17.3
Q ss_pred cceeeEEEEEECCEecCCCCe
Q psy5364 4 RRRRINLRTEGEGVDVPGSPF 24 (78)
Q Consensus 4 ~~G~~~i~V~~~g~~V~gSPf 24 (78)
.||.|.++|.+||+.+.-.-.
T Consensus 28 ~PG~Y~vdI~vN~~~~~~~~i 48 (136)
T 4b0m_A 28 LPGNYFVNVFVNGRKVDSGNI 48 (136)
T ss_dssp CCEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEEEECCccccceEE
Confidence 489999999999999864433
No 71
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=74.94 E-value=18 Score=25.85 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=39.3
Q ss_pred CccceeeEEEEEECCEecCCCCeEEEecC-CCCC--CeEEEeCCCcccceeceeceEEEEEccCC
Q psy5364 2 SLRRRRINLRTEGEGVDVPGSPFTVRVSG-APDA--SKVRVYGPGIEHGVLATFQSRFICDTRGA 63 (78)
Q Consensus 2 ~~~~G~~~i~V~~~g~~V~gSPf~v~V~~-~~d~--~kv~v~GpGL~~g~~~~~~~~F~Id~~~a 63 (78)
+.++|.|.|...++|..+...|..+++.. ..++ +.+.+...++.- +....|++..+|+
T Consensus 161 ~t~aG~~~Vta~v~g~~~~~~~~~vtf~a~~~sa~~s~l~~~~~~~~A----g~~~t~t~~v~Da 221 (414)
T 3tkv_A 161 GTTAGELDVMPKLNGQDAAANAAKVTVVADALSSNQSKVSVAEDHVKA----GESTTVTLVAKDA 221 (414)
T ss_dssp CSCCEEEEEECEETTEECSSSCEEEEEBCCSBCTTTCEEEESCSEEET----TCEEEEEEECBBT
T ss_pred ccccccEEEEEEECCeeccccceeEEEEcCCCcceeeEEEEcccceec----CCEEEEEEEEEcC
Confidence 46799999999999999988899988754 2222 455565554432 2345666666654
No 72
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=43.23 E-value=17 Score=21.01 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=12.0
Q ss_pred CccceeeEEEEEE---CCEecCCC
Q psy5364 2 SLRRRRINLRTEG---EGVDVPGS 22 (78)
Q Consensus 2 ~~~~G~~~i~V~~---~g~~V~gS 22 (78)
++.+|.|+|.-+. +|.+|.|+
T Consensus 73 ~L~~G~YtV~WrvvS~DGH~~~G~ 96 (102)
T 2c9r_A 73 PLTAGTYKVDWRAVSSDTFPITGS 96 (102)
T ss_dssp CCCSEEEEEEEEECCTTCCCEEEE
T ss_pred CCCCceEEEEEEEEecCCCccCCE
Confidence 3567777776544 34555443
No 73
>2l3u_A YBBR family protein; beta strand, figure eight, figure 8, structural genomics, PS biology, protein structure initiative; NMR {Desulfitobacterium hafniense}
Probab=43.05 E-value=11 Score=21.46 Aligned_cols=45 Identities=16% Similarity=0.143 Sum_probs=25.9
Q ss_pred CCCCeEEEeCCCcc-cceeceeceEEEEEccCCCccce--EEEEECCCC
Q psy5364 32 PDASKVRVYGPGIE-HGVLATFQSRFICDTRGAGAGQL--TVRVRGPKG 77 (78)
Q Consensus 32 ~d~~kv~v~GpGL~-~g~~~~~~~~F~Id~~~aG~g~l--~v~v~gP~g 77 (78)
.+--+|+++|+--. ... ........||.++.+.|.- .+.+..|+|
T Consensus 24 p~~V~V~v~G~~~~l~~l-~~~di~~~vDls~l~~G~~~v~v~v~~P~~ 71 (98)
T 2l3u_A 24 LPEVSVTIRAYPEILNNL-TKEQISLWIDATGKAVGEHTVKIYWQLPAG 71 (98)
T ss_dssp CCCCCCEEECCHHHHTTC-CGGGCBCEEECSSCCSBCCEECCCCBCSSS
T ss_pred CCEEEEEEEECHHHhhhC-ChhhEEEEEEecCCcCceEEEeEEEECCCC
Confidence 34455677776421 122 1223466889998776664 445667776
No 74
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=42.74 E-value=17 Score=21.12 Aligned_cols=21 Identities=10% Similarity=0.158 Sum_probs=11.6
Q ss_pred CccceeeEEEEEE---CCEecCCC
Q psy5364 2 SLRRRRINLRTEG---EGVDVPGS 22 (78)
Q Consensus 2 ~~~~G~~~i~V~~---~g~~V~gS 22 (78)
++.+|.|+|.-+. +|.+|.|+
T Consensus 75 ~L~~G~YtV~WrvvS~DGH~~~G~ 98 (104)
T 1lyq_A 75 PLPAGTYRVDWRAVSSDTHPITGN 98 (104)
T ss_dssp CCCSEEEEEEEEECCTTSCCEEEE
T ss_pred CCCCceEEEEEEEEecCCCccCCE
Confidence 3567777766544 34444443
No 75
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=42.07 E-value=53 Score=20.14 Aligned_cols=26 Identities=8% Similarity=0.081 Sum_probs=19.7
Q ss_pred cceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 4 RRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 4 ~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
+.|.|+|.+++.... .+..+.+.+..
T Consensus 77 ~aG~Y~i~~rvas~~-~g~~i~l~vdg 102 (160)
T 2cdp_A 77 QAGNYTISYQAGSGV-TGGSIEFLVNE 102 (160)
T ss_dssp SCEEEEEEEEEEBSS-SSCEEEEEEEC
T ss_pred CCcEEEEEEEEEcCC-CCceEEEEECC
Confidence 579999999997544 67778887743
No 76
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=41.27 E-value=70 Score=24.95 Aligned_cols=65 Identities=18% Similarity=0.164 Sum_probs=41.6
Q ss_pred EEEEECCEecCCCCeEEEecC------CCCCCeEEEeCCCcccceec--------eece--EEEEEccCCCccceEEEEE
Q psy5364 10 LRTEGEGVDVPGSPFTVRVSG------APDASKVRVYGPGIEHGVLA--------TFQS--RFICDTRGAGAGQLTVRVR 73 (78)
Q Consensus 10 i~V~~~g~~V~gSPf~v~V~~------~~d~~kv~v~GpGL~~g~~~--------~~~~--~F~Id~~~aG~g~l~v~v~ 73 (78)
|.|+.-|+.+-|.|+.++|.- ...--..++.|+||.++... ++.. .|.+--+.+|...|.+.+.
T Consensus 587 l~I~v~g~~~v~~~l~a~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~~v~Pg~~~~~~~~~~P~~~G~r~L~a~f~ 666 (695)
T 1g0d_A 587 LLVQVPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLSATQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLLVDFD 666 (695)
T ss_dssp CEEECCSCEETTCCEEEEEEEECCSSSCEESCEEEEEETTTEEEEEEECSSEECTTCEEEEEEEECCSSCEEEEEEEEEE
T ss_pred EEEEeCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCcceEEecCCCcCCCCEEEEEEEEEcCCccceEEEEEEE
Confidence 567788999999999998862 11113456889999644211 1222 3444446788877877765
Q ss_pred C
Q psy5364 74 G 74 (78)
Q Consensus 74 g 74 (78)
.
T Consensus 667 s 667 (695)
T 1g0d_A 667 S 667 (695)
T ss_dssp C
T ss_pred C
Confidence 4
No 77
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=39.29 E-value=1.3e+02 Score=23.30 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=41.7
Q ss_pred EEEEECCEecCCCCeEEEecC------CCCCCeEEEeCCCcccc-eece--------ece--EEEEEccCCCccceEEEE
Q psy5364 10 LRTEGEGVDVPGSPFTVRVSG------APDASKVRVYGPGIEHG-VLAT--------FQS--RFICDTRGAGAGQLTVRV 72 (78)
Q Consensus 10 i~V~~~g~~V~gSPf~v~V~~------~~d~~kv~v~GpGL~~g-~~~~--------~~~--~F~Id~~~aG~g~l~v~v 72 (78)
|.|+.-|..+-|.|+.++|.- ...--..++.|+||..+ .... +.. .|.+--+.+|.-.|.+.+
T Consensus 589 l~I~v~g~~~v~~~~~v~v~f~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~a~f 668 (687)
T 2q3z_A 589 IKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLVVNF 668 (687)
T ss_dssp CEEEEESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTTTCSSCEEEEECSCBCTTCEEEEEEEECCCSSSCEEEEEEE
T ss_pred EEEEeCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCCCceEEecCCCcCCCCEEEEEEEEEeccccceEEEEEE
Confidence 567777889999999988862 11113346889999654 1111 122 344445678888888876
Q ss_pred EC
Q psy5364 73 RG 74 (78)
Q Consensus 73 ~g 74 (78)
..
T Consensus 669 ~s 670 (687)
T 2q3z_A 669 ES 670 (687)
T ss_dssp EC
T ss_pred Ec
Confidence 64
No 78
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=39.26 E-value=1.3e+02 Score=23.33 Aligned_cols=66 Identities=21% Similarity=0.137 Sum_probs=42.3
Q ss_pred EEEEEECCEecCCCCeEEEecC----CCCCC--eEEEeCCCcccc-e-------eceece--EEEEEccCCCccceEEEE
Q psy5364 9 NLRTEGEGVDVPGSPFTVRVSG----APDAS--KVRVYGPGIEHG-V-------LATFQS--RFICDTRGAGAGQLTVRV 72 (78)
Q Consensus 9 ~i~V~~~g~~V~gSPf~v~V~~----~~d~~--kv~v~GpGL~~g-~-------~~~~~~--~F~Id~~~aG~g~l~v~v 72 (78)
.|.|+.-|..+-|.|+.++|.- ..... ..++.|+||..+ . ..++.+ .|.+--+.+|...|.+.+
T Consensus 595 ~l~I~v~g~~~v~~~l~v~v~f~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~a~f 674 (692)
T 1vjj_A 595 TLTLEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQLLADF 674 (692)
T ss_dssp CEEEEECSCCBTTSCEEEEEEEECCSSSCBCSEEEEEECTTTSSSCEEEEECCBCTTCEEEEEEEECCCSCEEEEEEEEE
T ss_pred CEEEEeCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCCCceEEEcCccCCCCEEEEEEEEEeccccceEEEEEE
Confidence 3678888999999999998862 11123 346889999632 1 111222 344445678888888776
Q ss_pred EC
Q psy5364 73 RG 74 (78)
Q Consensus 73 ~g 74 (78)
..
T Consensus 675 ~s 676 (692)
T 1vjj_A 675 SC 676 (692)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 79
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=38.10 E-value=37 Score=19.66 Aligned_cols=26 Identities=8% Similarity=0.091 Sum_probs=18.9
Q ss_pred cceeeEEEEEECCEecCCCCeEEEec
Q psy5364 4 RRRRINLRTEGEGVDVPGSPFTVRVS 29 (78)
Q Consensus 4 ~~G~~~i~V~~~g~~V~gSPf~v~V~ 29 (78)
+.|.|.|.++|....-....+.+.|.
T Consensus 49 ~aG~Y~l~~rya~~~~~~~~~~l~Vn 74 (127)
T 2vzp_A 49 SAGTYDVVVRYANGTTTSRPLDFSVN 74 (127)
T ss_dssp SSEEEEEEEEEECCSSSCCCEEEEET
T ss_pred CCCEEEEEEEEEcCCCCCeEEEEEEC
Confidence 57999999999653334567777773
No 80
>2oxg_Z SOXZ protein; immunoglobulin-like beta-sandwich fold, transport protein; 1.40A {Paracoccus denitrificans} PDB: 2ox5_Z 2oxh_Z*
Probab=36.51 E-value=65 Score=18.85 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=12.0
Q ss_pred EEEEEccCCCccceEEEEECCCC
Q psy5364 55 RFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 55 ~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.|.+.. .+.|.|++.+..-.|
T Consensus 76 ~F~~~~--~~~g~l~v~~~Dn~G 96 (108)
T 2oxg_Z 76 EFDAKV--DAAGEFKFTWYDDDG 96 (108)
T ss_dssp EEEEEE--CSSEEEEEEEEETTS
T ss_pred EEEEec--CCCcEEEEEEEECCC
Confidence 344433 344578888776554
No 81
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=36.26 E-value=39 Score=20.38 Aligned_cols=26 Identities=12% Similarity=-0.017 Sum_probs=19.0
Q ss_pred cceeeEEEEEECCEecCCCCeEEEec
Q psy5364 4 RRRRINLRTEGEGVDVPGSPFTVRVS 29 (78)
Q Consensus 4 ~~G~~~i~V~~~g~~V~gSPf~v~V~ 29 (78)
+.|.|+|.++|....-.+..+.+.|.
T Consensus 49 ~aG~Y~l~~ryang~~~~r~~~l~VN 74 (145)
T 2w3j_A 49 SAKTYTAQIRFGNGGTSARRATVVVN 74 (145)
T ss_dssp SCEEEEEEEEEECCSSSCCCEEEEET
T ss_pred CCeEEEEEEEEECCCCCCeEEEEEEC
Confidence 57999999999743334567777774
No 82
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=34.65 E-value=44 Score=19.98 Aligned_cols=27 Identities=11% Similarity=0.058 Sum_probs=19.3
Q ss_pred cceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 4 RRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 4 ~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
+.|.|.|.++|....-......+.|..
T Consensus 49 ~aG~Y~l~~ryang~~~~r~~~l~VNG 75 (139)
T 2w87_A 49 SSGRRTLTIRYANGGTANRNGSLVING 75 (139)
T ss_dssp SCEEEEEEEEEECCSSSCCCEEEEETT
T ss_pred CCcEEEEEEEEECCCCCCceEEEEECC
Confidence 579999999997533334677777743
No 83
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=34.15 E-value=67 Score=18.36 Aligned_cols=43 Identities=21% Similarity=0.358 Sum_probs=28.4
Q ss_pred CCCeEEEeCCCcc--cceeceeceEEEEEccC--CCccceEEEEECCCC
Q psy5364 33 DASKVRVYGPGIE--HGVLATFQSRFICDTRG--AGAGQLTVRVRGPKG 77 (78)
Q Consensus 33 d~~kv~v~GpGL~--~g~~~~~~~~F~Id~~~--aG~g~l~v~v~gP~g 77 (78)
-+++|.++=.|.. ...+ .|-.|.|+--. .+.|+|.|.|+.-+|
T Consensus 25 s~A~V~v~qnG~~iy~~~V--ppGpF~I~dl~~~~~~Gdl~V~v~eadG 71 (90)
T 3fcg_A 25 TQARVEVLRDGYTVSNELV--PSGPFELANLPLGGGSGELKVIIHESDG 71 (90)
T ss_dssp SSEEEEEESSSCEEEEEEE--CSEEEEECCCC---CCEEEEEEEECTTS
T ss_pred CCcEEEEEECCEEEEEeEe--CCCCeEEcCCcccCCceeEEEEEEECCC
Confidence 4567777766643 2221 35579998753 578999999998766
No 84
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=34.11 E-value=45 Score=19.84 Aligned_cols=26 Identities=12% Similarity=0.092 Sum_probs=18.4
Q ss_pred cceeeEEEEEECCEecCCCCeEEEec
Q psy5364 4 RRRRINLRTEGEGVDVPGSPFTVRVS 29 (78)
Q Consensus 4 ~~G~~~i~V~~~g~~V~gSPf~v~V~ 29 (78)
+.|.|.|.++|....-....+.+.|.
T Consensus 50 ~aG~Y~l~~ryan~~~~~~~~~l~VN 75 (144)
T 2w47_A 50 SSGSYALIFRYANGTTANRPMRITVN 75 (144)
T ss_dssp SSEEEEEEEEEECCSSSCCCEEEEET
T ss_pred CCcEEEEEEEEECCCCCCeEEEEEEC
Confidence 57999999999643323566777773
No 85
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=33.39 E-value=30 Score=21.66 Aligned_cols=16 Identities=13% Similarity=-0.035 Sum_probs=13.5
Q ss_pred CCccceeeEEEEEECC
Q psy5364 1 MSLRRRRINLRTEGEG 16 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g 16 (78)
|++.+|.|.|++-+.+
T Consensus 132 l~L~~G~Y~lsv~i~~ 147 (188)
T 2r5o_A 132 VDLNSGDYLLSFGISA 147 (188)
T ss_dssp CCBCSEEEEEEEEEEE
T ss_pred cccCCCeEEEEEEEec
Confidence 6789999999998754
No 86
>2kps_A Uncharacterized protein; beta strand, figure eight, figure 8, structural genomics, PSI-2, protein structure initiative; NMR {Desulfitobacterium hafniense Y51} PDB: 2l3u_A
Probab=33.20 E-value=8 Score=22.33 Aligned_cols=25 Identities=20% Similarity=0.399 Sum_probs=17.3
Q ss_pred eEEEEEccCCCccc--eEEEEECCCCC
Q psy5364 54 SRFICDTRGAGAGQ--LTVRVRGPKGF 78 (78)
Q Consensus 54 ~~F~Id~~~aG~g~--l~v~v~gP~g~ 78 (78)
....||.++...|. +.+.|.-|+|+
T Consensus 46 i~a~vDLs~l~~G~~~vpv~v~lP~gv 72 (98)
T 2kps_A 46 ISLWIDATGKAVGEHTVKIYWQLPAGI 72 (98)
T ss_dssp SBCEECCTTCCSSCEEEECCCBCSSCC
T ss_pred EEEEEECCCCCCCeEEEeEEEECCCCE
Confidence 35688998766655 66667778774
No 87
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=31.15 E-value=70 Score=18.24 Aligned_cols=65 Identities=12% Similarity=0.113 Sum_probs=34.5
Q ss_pred ceeeEEEEEECCEecCCCCeEEEecCCCCCCeEEEeCCCcccceeceeceEEEEEccCCCccc--eEEEEECCCC
Q psy5364 5 RRRINLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQ--LTVRVRGPKG 77 (78)
Q Consensus 5 ~G~~~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~--l~v~v~gP~g 77 (78)
++.|++.|.+.+.+= =+ .+......-+|+++|+= ... ......=.||-+++..|+ +.|++.-|.|
T Consensus 2 e~tytVPv~~~Nlp~---~~--~v~~~~~tV~V~v~G~r--~~~-~~~di~A~VDLsg~~~G~~~~~V~v~~P~G 68 (90)
T 3lyw_A 2 DPTLTLSLIAKNTPA---NS--MIMTKLPSVRVKTEGYN--PSI-NVNELFAYVDLSGSEPGEHDYEVKVEPIPN 68 (90)
T ss_dssp CCEEEEEEEEESCCT---TE--EECSCCCEEEEEEEECC--TTC-CSTTCEEEEECTTCCSEEEEEECEECCCTT
T ss_pred CceEEeeEEEeeCCC---Cc--EEecCCCEEEEEEEecC--cCC-ChHHEEEEEECcCCCCCcEeEEEEEECCCC
Confidence 467888888864321 11 11111222344566654 122 122345678888876665 5566777776
No 88
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=30.31 E-value=73 Score=24.98 Aligned_cols=65 Identities=22% Similarity=0.311 Sum_probs=40.7
Q ss_pred EEEEECCEecCCCCeEEEecC----CCCCCeE--EEeCCCccccee-------ceece--EEEEEccCCCccceEEEEEC
Q psy5364 10 LRTEGEGVDVPGSPFTVRVSG----APDASKV--RVYGPGIEHGVL-------ATFQS--RFICDTRGAGAGQLTVRVRG 74 (78)
Q Consensus 10 i~V~~~g~~V~gSPf~v~V~~----~~d~~kv--~v~GpGL~~g~~-------~~~~~--~F~Id~~~aG~g~l~v~v~g 74 (78)
|.|+.-|..+-|.|+.++|.- ......| ++.|+||.++.. .++.+ .|.+--+.+|...|.+.+..
T Consensus 632 l~I~v~g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~a~f~s 711 (731)
T 1ex0_A 632 IIIKVRGTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPWVSGHRKLIASMSS 711 (731)
T ss_dssp CEEEEEECCBTTSCEEEEEEEECCSSSCEEEEEEEEEETTTEEEEEEEEEEECTTCEEEEEEEECCSSCEEEEEEEEEEC
T ss_pred EEEEeCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCceeeEecCccCCCCEEEEEEEEEeccccceEEEEEEEC
Confidence 566777888999999998862 1122333 578999964321 11222 34444567888888777654
No 89
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=29.75 E-value=49 Score=19.93 Aligned_cols=17 Identities=6% Similarity=-0.017 Sum_probs=12.1
Q ss_pred ccceeeEEEEEECCEec
Q psy5364 3 LRRRRINLRTEGEGVDV 19 (78)
Q Consensus 3 ~~~G~~~i~V~~~g~~V 19 (78)
..||.|++.+.+-+...
T Consensus 90 ~~pG~Ytl~a~l~~~~~ 106 (120)
T 3isy_A 90 PEPGTYEVKVTFKGRAE 106 (120)
T ss_dssp CCSEEEEEEEEECCEET
T ss_pred CCCccEEEEEEEEeeec
Confidence 46788888888776544
No 90
>3sk7_A Protein SEQA; sequestration, negative regulator, DNA replication initiatio binding, replication inhibitor; HET: FME; 1.50A {Vibrio cholerae}
Probab=28.51 E-value=20 Score=21.86 Aligned_cols=12 Identities=33% Similarity=0.686 Sum_probs=9.8
Q ss_pred CCEecCCCCeEE
Q psy5364 15 EGVDVPGSPFTV 26 (78)
Q Consensus 15 ~g~~V~gSPf~v 26 (78)
+-.+||+|||=|
T Consensus 71 kPK~Ip~TpfWV 82 (116)
T 3sk7_A 71 KPKAIPNTPFWV 82 (116)
T ss_dssp CCEECTTSSCEE
T ss_pred CCCcCCCCCeeE
Confidence 457999999965
No 91
>3rfz_B Outer membrane usher protein, type 1 fimbrial SYN; beta-barrel, pilus assembly, outer-membrane, cell adhesion-T protein-chaperone complex; 2.80A {Escherichia coli} PDB: 3ohn_A 1zdv_A
Probab=26.29 E-value=48 Score=26.00 Aligned_cols=20 Identities=5% Similarity=-0.160 Sum_probs=17.0
Q ss_pred ccceeeEEEEEECCEecCCC
Q psy5364 3 LRRRRINLRTEGEGVDVPGS 22 (78)
Q Consensus 3 ~~~G~~~i~V~~~g~~V~gS 22 (78)
+.||.|.|+|.+|++.+...
T Consensus 28 ~~pG~Y~vdi~vN~~~~~~~ 47 (843)
T 3rfz_B 28 LPPGTYRVDIYLNNGYMATR 47 (843)
T ss_dssp CCCEEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEEEECCeEccce
Confidence 56999999999999988644
No 92
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=25.26 E-value=1e+02 Score=17.58 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=24.2
Q ss_pred CeEEEeCCCcccceeceeceEEEEEccCCCccceEEEEECCCC
Q psy5364 35 SKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 35 ~kv~v~GpGL~~g~~~~~~~~F~Id~~~aG~g~l~v~v~gP~g 77 (78)
.||..|=.|..-+.....|-.|.++.. +|.-.|+++...-+|
T Consensus 33 ~kVef~vdg~~vg~dt~apy~~~w~~~-~G~htl~a~AtD~~G 74 (98)
T 3pe9_A 33 SRVDFLVDGEVIGSDREAPYEYEWKAV-EGNHEISVIAYDDDD 74 (98)
T ss_dssp EEEEEEETTEEEEEECSSSEEEEEECC-SEEEEEEEEEEETTC
T ss_pred EEEEEEECCEEecccccCCEEEEEEcC-CccEEEEEEEEECCC
Confidence 466777666554443445667777766 555556655544433
No 93
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=24.60 E-value=81 Score=17.63 Aligned_cols=8 Identities=13% Similarity=0.003 Sum_probs=3.1
Q ss_pred ceEEEEEc
Q psy5364 53 QSRFICDT 60 (78)
Q Consensus 53 ~~~F~Id~ 60 (78)
++...+.|
T Consensus 87 p~~~~~~T 94 (104)
T 2dle_A 87 PGFLQVHT 94 (104)
T ss_dssp CEEEEEEC
T ss_pred CeeEEEEc
Confidence 33333433
No 94
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=22.87 E-value=76 Score=19.11 Aligned_cols=22 Identities=18% Similarity=0.357 Sum_probs=12.9
Q ss_pred EEEEccCCCccceEEEEECCCC
Q psy5364 56 FICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 56 F~Id~~~aG~g~l~v~v~gP~g 77 (78)
|++....++.|.|+|++.+|+|
T Consensus 72 ~~~rvas~~gg~ievrlds~~G 93 (145)
T 1uy4_A 72 FSATVATEVNTSIQIRSDSPTG 93 (145)
T ss_dssp EEEEEECSSCEEEEEEESSTTS
T ss_pred EEEEEEeCCCcEEEEEECCCCC
Confidence 4444433445677777777665
No 95
>1j3e_A SEQA protein; protein-DNA complex, recognition of hemimethylated DNA, mismatched DNA, replication; HET: 6MA; 2.50A {Escherichia coli} SCOP: d.228.1.1 PDB: 1iu3_C
Probab=22.63 E-value=29 Score=21.03 Aligned_cols=12 Identities=42% Similarity=0.833 Sum_probs=9.8
Q ss_pred CCEecCCCCeEE
Q psy5364 15 EGVDVPGSPFTV 26 (78)
Q Consensus 15 ~g~~V~gSPf~v 26 (78)
+-++|++|||=|
T Consensus 70 kPK~Ip~TpfWV 81 (115)
T 1j3e_A 70 KPKHVPGTPYWV 81 (115)
T ss_dssp CCEECTTSSCEE
T ss_pred CCCcCCCCCeee
Confidence 458999999965
No 96
>3h6q_A Macrocypin 1A; mycocypin, cysteine protease inhibitor, kunitz type inhibitor, beta trefoil; 1.64A {Macrolepiota procera}
Probab=22.39 E-value=52 Score=21.15 Aligned_cols=17 Identities=18% Similarity=0.180 Sum_probs=14.6
Q ss_pred CCccceeeEEEEEECCE
Q psy5364 1 MSLRRRRINLRTEGEGV 17 (78)
Q Consensus 1 ~~~~~G~~~i~V~~~g~ 17 (78)
|.++.|-|+|..+..|+
T Consensus 1 Msfe~G~YTLr~~~~~~ 17 (169)
T 3h6q_A 1 MGFEDGFYTILHLAEGQ 17 (169)
T ss_dssp -CCCCEEEEEEEECTTC
T ss_pred CcccCCeEEEEeecccC
Confidence 89999999999988875
No 97
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=22.26 E-value=55 Score=19.03 Aligned_cols=24 Identities=29% Similarity=0.383 Sum_probs=14.6
Q ss_pred eEEEEEccCCCccc--eEEEEE-CCCC
Q psy5364 54 SRFICDTRGAGAGQ--LTVRVR-GPKG 77 (78)
Q Consensus 54 ~~F~Id~~~aG~g~--l~v~v~-gP~g 77 (78)
..-.||.++.+.|. +.+.++ =|+|
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~ 81 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGD 81 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTT
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCC
Confidence 45677888777666 444555 3544
No 98
>2kxy_A Uncharacterized protein; beta strand protein, structural genomics, PSI-2, protein STR initiative; NMR {Streptococcus thermophilus}
Probab=21.67 E-value=46 Score=18.75 Aligned_cols=32 Identities=22% Similarity=0.179 Sum_probs=19.2
Q ss_pred EEEEEECCEecCCCCeEEEecCCCCCCeEEEeCCC
Q psy5364 9 NLRTEGEGVDVPGSPFTVRVSGAPDASKVRVYGPG 43 (78)
Q Consensus 9 ~i~V~~~g~~V~gSPf~v~V~~~~d~~kv~v~GpG 43 (78)
-|.+.+.|..= +=|.+. ....+|+.|+++|+-
T Consensus 12 pV~~~~~G~~~--~gy~v~-~~~~~P~~VtV~G~~ 43 (100)
T 2kxy_A 12 PVKLELTGDKA--SNVSSI-SYSFDRGHVTIVGSQ 43 (100)
T ss_dssp CEEEEEESCCC--TTEEEE-EEEESCCCCEEEECH
T ss_pred EEEEEEecccC--CCeEEE-eEEEccCEEEEEECH
Confidence 45555555332 236543 223689999999985
No 99
>1lrr_A SEQA protein; protein-DNA complex, replication, methylated GATC, replication inhibitor/DNA complex; HET: 6MA; 2.65A {Escherichia coli} SCOP: d.228.1.1
Probab=21.59 E-value=31 Score=21.37 Aligned_cols=12 Identities=42% Similarity=0.833 Sum_probs=9.8
Q ss_pred CCEecCCCCeEE
Q psy5364 15 EGVDVPGSPFTV 26 (78)
Q Consensus 15 ~g~~V~gSPf~v 26 (78)
+-++|++|||=+
T Consensus 86 kPK~Ip~TpfWV 97 (131)
T 1lrr_A 86 KPKHVPGTPYWV 97 (131)
T ss_dssp CCEECTTSSCEE
T ss_pred CCCcCCCCCeEE
Confidence 458999999965
No 100
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=21.43 E-value=80 Score=19.60 Aligned_cols=22 Identities=23% Similarity=0.394 Sum_probs=12.3
Q ss_pred EEEEccCCCccceEEEEECCCC
Q psy5364 56 FICDTRGAGAGQLTVRVRGPKG 77 (78)
Q Consensus 56 F~Id~~~aG~g~l~v~v~gP~g 77 (78)
|++....++.|.++|++.+|+|
T Consensus 94 ~~~rvas~~~G~ievrlds~~G 115 (168)
T 1od3_A 94 VTARVATQNATTIQVRLGSPSG 115 (168)
T ss_dssp EEEEEECSSCEEEEEEESSTTS
T ss_pred EEEEEEcCCCcEEEEEECCCCC
Confidence 3333333445677777776665
No 101
>2l7y_A Putative endo-beta-N-acetylglucosaminidase; putative surface protein, structural protein; NMR {Streptococcus pneumoniae}
Probab=20.78 E-value=1.1e+02 Score=17.82 Aligned_cols=25 Identities=32% Similarity=0.363 Sum_probs=16.4
Q ss_pred ccceeeEEEEEECCEecCCCCeEEEecC
Q psy5364 3 LRRRRINLRTEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 3 ~~~G~~~i~V~~~g~~V~gSPf~v~V~~ 30 (78)
.++|.=+|.|.|.|... =|.|+|.+
T Consensus 59 ~~~G~QtlTVtY~G~t~---~f~V~V~~ 83 (98)
T 2l7y_A 59 QKTGRQTLTLHYQGHEV---SFDVLVSP 83 (98)
T ss_dssp TSCSSEEEEEEETTEEE---EEEEEEEC
T ss_pred CCCCcEEEEEEECCEEE---EEEEEEEe
Confidence 35677777777777664 36666654
No 102
>3gmg_A Uncharacterized protein RV1825/MT1873; structural genomics, unknown function, cell membrane, membrane, transmembrane, PSI-2; 1.50A {Mycobacterium tuberculosis}
Probab=20.26 E-value=91 Score=19.91 Aligned_cols=18 Identities=11% Similarity=0.278 Sum_probs=14.9
Q ss_pred EEECCEecCCCCeEEEecC
Q psy5364 12 TEGEGVDVPGSPFTVRVSG 30 (78)
Q Consensus 12 V~~~g~~V~gSPf~v~V~~ 30 (78)
+..||..+. +||.|++..
T Consensus 93 i~vdg~~~~-~Py~I~AIG 110 (170)
T 3gmg_A 93 LTVDTKVLS-PPYSILAIG 110 (170)
T ss_dssp EEETTEEEC-SSEEEEEES
T ss_pred EEECCEEec-CCEEEEEEE
Confidence 678999996 999998753
Done!