BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5367
(201 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4FJ3|A Chain A, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated
C-Raf Peptide
pdb|4FJ3|B Chain B, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated
C-Raf Peptide
Length = 235
Score = 173 bits (439), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 85/99 (85%), Positives = 92/99 (92%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S +K ELVQ+AKLAEQAERYDDMAA MK+VTE G ELSNEERNLLSVAYKNVVGARRSSW
Sbjct: 5 SMDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW 64
Query: 64 RVISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQKTEG+E+KQQMAREYREK+E ELRDIC DVL
Sbjct: 65 RVVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVL 103
>pdb|2V7D|A Chain A, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated
Integrin Beta2 Peptide
pdb|2V7D|B Chain B, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated
Integrin Beta2 Peptide
pdb|2V7D|C Chain C, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated
Integrin Beta2 Peptide
pdb|2V7D|D Chain D, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated
Integrin Beta2 Peptide
Length = 247
Score = 173 bits (438), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/99 (85%), Positives = 92/99 (92%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S +K ELVQ+AKLAEQAERYDDMAA MK+VTE G ELSNEERNLLSVAYKNVVGARRSSW
Sbjct: 2 SMDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW 61
Query: 64 RVISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQKTEG+E+KQQMAREYREK+E ELRDIC DVL
Sbjct: 62 RVVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVL 100
>pdb|2O02|A Chain A, Phosphorylation Independent Interactions Between 14-3-3
And Exoenzyme S: From Structure To Pathogenesis
pdb|2O02|B Chain B, Phosphorylation Independent Interactions Between 14-3-3
And Exoenzyme S: From Structure To Pathogenesis
Length = 230
Score = 172 bits (437), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 91/97 (93%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
+K ELVQ+AKLAEQAERYDDMAA MK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRV
Sbjct: 2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRV 61
Query: 66 ISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVL 102
+SSIEQKTEG+E+KQQMAREYREK+E ELRDIC DVL
Sbjct: 62 VSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVL 98
>pdb|3RDH|A Chain A, X-Ray Induced Covalent Inhibition Of 14-3-3
pdb|3RDH|B Chain B, X-Ray Induced Covalent Inhibition Of 14-3-3
pdb|3RDH|C Chain C, X-Ray Induced Covalent Inhibition Of 14-3-3
pdb|3RDH|D Chain D, X-Ray Induced Covalent Inhibition Of 14-3-3
Length = 248
Score = 172 bits (437), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 92/100 (92%)
Query: 3 SSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSS 62
S +K ELVQ+AKLAEQAERYDDMAA MK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 2 SHMDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSS 61
Query: 63 WRVISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVL 102
WRV+SSIEQKTEG+E+KQQMAREYREK+E ELRDIC DVL
Sbjct: 62 WRVVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVL 101
>pdb|2C1J|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And
Phosphoacetylated Histone H3 By 14-3-3
pdb|2C1J|B Chain B, Molecular Basis For The Recognition Of Phosphorylated And
Phosphoacetylated Histone H3 By 14-3-3
pdb|2C1N|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And
Phosphoacetylated Histone H3 By 14-3-3
pdb|2C1N|B Chain B, Molecular Basis For The Recognition Of Phosphorylated And
Phosphoacetylated Histone H3 By 14-3-3
Length = 258
Score = 172 bits (436), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 91/97 (93%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
+K ELVQ+AKLAEQAERYDDMAA MK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRV
Sbjct: 15 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRV 74
Query: 66 ISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVL 102
+SSIEQKTEG+E+KQQMAREYREK+E ELRDIC DVL
Sbjct: 75 VSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVL 111
>pdb|1A38|A Chain A, 14-3-3 Protein Zeta Bound To R18 Peptide
pdb|1A38|B Chain B, 14-3-3 Protein Zeta Bound To R18 Peptide
pdb|1A4O|A Chain A, 14-3-3 Protein Zeta Isoform
pdb|1A4O|B Chain B, 14-3-3 Protein Zeta Isoform
pdb|1A4O|C Chain C, 14-3-3 Protein Zeta Isoform
pdb|1A4O|D Chain D, 14-3-3 Protein Zeta Isoform
pdb|1A37|A Chain A, 14-3-3 Protein Zeta Bound To Ps-Raf259 Peptide
pdb|1A37|B Chain B, 14-3-3 Protein Zeta Bound To Ps-Raf259 Peptide
pdb|1QJA|A Chain A, 14-3-3 ZetaPHOSPHOPEPTIDE COMPLEX (MODE 2)
pdb|1QJA|B Chain B, 14-3-3 ZetaPHOSPHOPEPTIDE COMPLEX (MODE 2)
pdb|1QJB|A Chain A, 14-3-3 ZetaPHOSPHOPEPTIDE COMPLEX (MODE 1)
pdb|1QJB|B Chain B, 14-3-3 ZetaPHOSPHOPEPTIDE COMPLEX (MODE 1)
pdb|1IB1|A Chain A, Crystal Structure Of The 14-3-3 Zeta:serotonin N-
Acetyltransferase Complex
pdb|1IB1|B Chain B, Crystal Structure Of The 14-3-3 Zeta:serotonin N-
Acetyltransferase Complex
pdb|1IB1|C Chain C, Crystal Structure Of The 14-3-3 Zeta:serotonin N-
Acetyltransferase Complex
pdb|1IB1|D Chain D, Crystal Structure Of The 14-3-3 Zeta:serotonin N-
Acetyltransferase Complex
pdb|3CU8|A Chain A, Impaired Binding Of 14-3-3 To Raf1 Is Linked To Noonan And
Leopard Syndrome
pdb|3CU8|B Chain B, Impaired Binding Of 14-3-3 To Raf1 Is Linked To Noonan And
Leopard Syndrome
pdb|2WH0|A Chain A, Recognition Of An Intrachain Tandem 14-3-3 Binding Site
Within Protein Kinase C Epsilon
pdb|2WH0|B Chain B, Recognition Of An Intrachain Tandem 14-3-3 Binding Site
Within Protein Kinase C Epsilon
pdb|2WH0|C Chain C, Recognition Of An Intrachain Tandem 14-3-3 Binding Site
Within Protein Kinase C Epsilon
pdb|2WH0|D Chain D, Recognition Of An Intrachain Tandem 14-3-3 Binding Site
Within Protein Kinase C Epsilon
pdb|3NKX|A Chain A, Impaired Binding Of 14-3-3 To Raf1 Is Linked To Noonan And
Leopard Syndrome
pdb|3NKX|B Chain B, Impaired Binding Of 14-3-3 To Raf1 Is Linked To Noonan And
Leopard Syndrome
Length = 245
Score = 172 bits (436), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 91/97 (93%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
+K ELVQ+AKLAEQAERYDDMAA MK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRV
Sbjct: 2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRV 61
Query: 66 ISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVL 102
+SSIEQKTEG+E+KQQMAREYREK+E ELRDIC DVL
Sbjct: 62 VSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVL 98
>pdb|4GNT|A Chain A, Complex Of Chrebp And 14-3-3beta
Length = 245
Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 91/98 (92%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
+K ELVQ+AKLAEQAERYDDMAAAMKAVTE G ELSNEERNLLSVAYKNVVGARRSSWRV
Sbjct: 4 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRV 63
Query: 66 ISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVLK 103
ISSIEQKTE +E+KQQM +EYREK+E EL+DIC DVL+
Sbjct: 64 ISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLE 101
>pdb|2BQ0|A Chain A, 14-3-3 Protein Beta (Human)
pdb|2BQ0|B Chain B, 14-3-3 Protein Beta (Human)
pdb|2C23|A Chain A, 14-3-3 Protein Beta (Human) In Complex With Exoenzyme S
Peptide
Length = 245
Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 91/98 (92%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
+K ELVQ+AKLAEQAERYDDMAAAMKAVTE G ELSNEERNLLSVAYKNVVGARRSSWRV
Sbjct: 4 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRV 63
Query: 66 ISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVLK 103
ISSIEQKTE +E+KQQM +EYREK+E EL+DIC DVL+
Sbjct: 64 ISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLE 101
>pdb|2BTP|A Chain A, 14-3-3 Protein Theta (Human) Complexed To Peptide
pdb|2BTP|B Chain B, 14-3-3 Protein Theta (Human) Complexed To Peptide
Length = 256
Score = 153 bits (387), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 86/100 (86%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S EK EL+Q+AKLAEQAERYDDMA MKAVTE G ELSNEERNLLSVAYKNVVG RRS+W
Sbjct: 22 SMEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAW 81
Query: 64 RVISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVLK 103
RVISSIEQKT+ S++K Q+ ++YREKVE ELR IC VL+
Sbjct: 82 RVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLE 121
>pdb|4DNK|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN
5- Monooxygenase Activation Protein, Beta Polypeptide
(Ywhab) From Homo Sapiens At 2.20 A Resolution.
pdb|4DNK|B Chain B, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN
5- Monooxygenase Activation Protein, Beta Polypeptide
(Ywhab) From Homo Sapiens At 2.20 A Resolution
Length = 247
Score = 149 bits (377), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 89/100 (89%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
+ +K ELVQ+AKLAEQAERYDD AAA KAVTE G ELSNEERNLLSVAYKNVVGARRSSW
Sbjct: 3 TXDKSELVQKAKLAEQAERYDDXAAAXKAVTEQGHELSNEERNLLSVAYKNVVGARRSSW 62
Query: 64 RVISSIEQKTEGSERKQQMAREYREKVEKELRDICYDVLK 103
RVISSIEQKTE +E+KQQ +EYREK+E EL+DIC DVL+
Sbjct: 63 RVISSIEQKTERNEKKQQXGKEYREKIEAELQDICNDVLE 102
>pdb|3UZD|A Chain A, Crystal Structure Of 14-3-3 Gamma
Length = 248
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 86/99 (86%), Gaps = 2/99 (2%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
++E+LVQ+A+LAEQAERYDDMAAAMK VTE LSNEERNLLSVAYKNVVGARRSSWRV
Sbjct: 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRV 62
Query: 66 ISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
ISSIEQKT +G+E+K +M R YREK+EKEL +C DVL
Sbjct: 63 ISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVL 101
>pdb|2C63|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C63|B Chain B, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C63|C Chain C, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C63|D Chain D, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C74|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide
pdb|2C74|B Chain B, 14-3-3 Protein Eta (Human) Complexed To Peptide
Length = 247
Score = 147 bits (371), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 92/113 (81%), Gaps = 5/113 (4%)
Query: 3 SSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSS 62
S G++E+L+QRA+LAEQAERYDDMA+AMKAVTE LSNE+RNLLSVAYKNVVGARRSS
Sbjct: 1 SMGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSS 60
Query: 63 WRVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVLK---RSQVKGC 110
WRVISSIEQKT +G+E+K + + YREK+EKEL +C DVL + +K C
Sbjct: 61 WRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNC 113
>pdb|2B05|A Chain A, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|B Chain B, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|C Chain C, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|D Chain D, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|E Chain E, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
pdb|2B05|F Chain F, Crystal Structure Of 14-3-3 Gamma In Complex With A
Phosphoserine Peptide
Length = 246
Score = 147 bits (371), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 86/99 (86%), Gaps = 2/99 (2%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
++E+LVQ+A+LAEQAERYDDMAAAMK VTE LSNEERNLLSVAYKNVVGARRSSWRV
Sbjct: 2 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRV 61
Query: 66 ISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
ISSIEQKT +G+E+K +M R YREK+EKEL +C DVL
Sbjct: 62 ISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVL 100
>pdb|4E2E|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN
5- Monooxygenase Activation Protein, Gamma Polypeptide
(Ywhag) From Homo Sapiens At 2.25 A Resolution
Length = 248
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 83/99 (83%), Gaps = 2/99 (2%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
++E+LVQ+A+LAEQAERYDD AAA K VTE LSNEERNLLSVAYKNVVGARRSSWRV
Sbjct: 4 DREQLVQKARLAEQAERYDDXAAAXKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRV 63
Query: 66 ISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
ISSIEQKT +G+E+K + R YREK+EKEL +C DVL
Sbjct: 64 ISSIEQKTSADGNEKKIEXVRAYREKIEKELEAVCQDVL 102
>pdb|3P1P|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide
pdb|3P1Q|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin A
pdb|3SML|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin A
Aglycone
pdb|3SMM|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J
Aglycone
pdb|3SMN|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin
A-Thf
Length = 236
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELSNEERNLLSVAYKNVVG +R++W
Sbjct: 5 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSNEERNLLSVAYKNVVGGQRAAW 64
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 65 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 105
>pdb|3UBW|A Chain A, Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphopeptide
And A Small Fragment Hit From A Fbdd Screen
Length = 261
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 81/104 (77%), Gaps = 2/104 (1%)
Query: 1 MSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARR 60
M S ++E+LV +AKLAEQAERYD+M +MK V VEL+ EERNLLSVAYKNV+GARR
Sbjct: 25 MGSMDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARR 84
Query: 61 SSWRVISSIEQKTE--GSERKQQMAREYREKVEKELRDICYDVL 102
+SWR+ISSIEQK E G E K +M REYR+ VE EL+ IC D+L
Sbjct: 85 ASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICXDIL 128
>pdb|3LW1|A Chain A, Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptide
Length = 253
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 5 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSXEERNLLSVAYKNVVGGQRAAW 64
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 65 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 105
>pdb|3U9X|A Chain A, Covalent Attachment Of Pyridoxal-Phosphate Derivatives To
14-3-3 Proteins
Length = 235
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 4 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSXEERNLLSVAYKNVVGGQRAAW 63
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 64 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 104
>pdb|3IQJ|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Raf1 Peptide (10mer)
pdb|3IQU|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Raf1 Peptide (6mer)
pdb|3IQV|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Raf1 Peptide (6mer) And Stabilisator Fusicoccin
pdb|3MHR|A Chain A, 14-3-3 Sigma In Complex With Yap Ps127-Peptide
Length = 236
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 5 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSXEERNLLSVAYKNVVGGQRAAW 64
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 65 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 105
>pdb|3P1N|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Task-3 Peptide
pdb|3P1O|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Task-3 Peptide And Stabilisator Fusicoccin A
pdb|3UX0|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With
Task-3 Peptide And Stabilizer Fusicoccin H
Length = 235
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 4 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSXEERNLLSVAYKNVVGGQRAAW 63
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 64 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 104
>pdb|3SMO|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J
Aglycone
Length = 235
Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 4 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSVEERNLLSVAYKNVVGGQRAAW 63
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 64 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 104
>pdb|3P1R|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN
COMPLEX WITH Task-3 Peptide
pdb|3P1S|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin A
pdb|3SPR|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Fc-Thf
pdb|3SMK|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN
COMPLEX WITH Task-3 Peptide And Stabilizer Cotylenin A
Length = 236
Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 5 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSVEERNLLSVAYKNVVGGQRAAW 64
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 65 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 105
>pdb|4HQW|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein
Interactions
Length = 236
Score = 126 bits (317), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 5 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAW 64
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 65 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 105
>pdb|3O8I|A Chain A, Structure Of 14-3-3 Isoform Sigma In Complex With A C-Raf1
Peptide And A Stabilizing Small Molecule Fragment
Length = 239
Score = 126 bits (317), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 8 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAW 67
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 68 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 108
>pdb|4DAT|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3
Binding Motif Ii
pdb|4DAU|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3
Binding Motif I
pdb|4HRU|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein
Interactions
Length = 234
Score = 126 bits (317), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 3 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAW 62
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 63 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 103
>pdb|3T0L|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein
Interactions From Virtual Screening
pdb|3T0M|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein
Interactions From Virtual Screening
Length = 235
Score = 126 bits (317), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSW 63
S E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++W
Sbjct: 4 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAW 63
Query: 64 RVISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
RV+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 64 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 104
>pdb|2BR9|A Chain A, 14-3-3 Protein Epsilon (Human) Complexed To Peptide
Length = 234
Score = 126 bits (316), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Query: 3 SSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSS 62
S ++E+LV +AKLAEQAERYD+M +MK V VEL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 SMDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRAS 60
Query: 63 WRVISSIEQKTE--GSERKQQMAREYREKVEKELRDICYDVL 102
WR+ISSIEQK E G E K +M REYR+ VE EL+ IC D+L
Sbjct: 61 WRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDIL 102
>pdb|1YWT|A Chain A, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In
Complex With A Mode-1 Phosphopeptide
pdb|1YWT|B Chain B, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In
Complex With A Mode-1 Phosphopeptide
pdb|1YZ5|A Chain A, The Crystal Structure Of 14-3-3-Sigma At 2.8 Angstrom
Resolution
pdb|1YZ5|B Chain B, The Crystal Structure Of 14-3-3-Sigma At 2.8 Angstrom
Resolution
Length = 248
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
E+ L+Q+AKLAEQAERY+DMAA MK E G ELS EERNLLSVAYKNVVG +R++WRV
Sbjct: 2 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRV 61
Query: 66 ISSIEQKT--EGSERKQQMAREYREKVEKELRDICYDVL 102
+SSIEQK+ EGSE K REYREKVE EL+ +C VL
Sbjct: 62 LSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVL 100
>pdb|3UAL|A Chain A, Crystal Structure Of 14-3-3 Epsilon With Mlf1 Peptide
Length = 232
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Query: 6 EKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 65
++E+LV +AKLAEQAERYD+M +MK V VEL+ EERNLLSVAYKNV+GARR+SWR+
Sbjct: 3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRI 62
Query: 66 ISSIEQKTE--GSERKQQMAREYREKVEKELRDICYDVL 102
ISSIEQK E G E K +M REYR+ VE EL+ IC D+L
Sbjct: 63 ISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDIL 101
>pdb|2O98|A Chain A, Structure Of The 14-3-3 H+-Atpase Plant Complex
pdb|2O98|B Chain B, Structure Of The 14-3-3 H+-Atpase Plant Complex
Length = 242
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Query: 7 KEELVQRAKLAEQAERYDDMAAAMKAVTET--GVELSNEERNLLSVAYKNVVGARRSSWR 64
+EE V AKLAEQAERY++M M+ V+ + EL+ EERNLLSVAYKNV+GARR+SWR
Sbjct: 8 REENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWR 67
Query: 65 VISSIEQKTE--GSERKQQMAREYREKVEKELRDICYDVLKRSQVKGCP 111
+ISSIEQK E G+E REYR K+E EL IC +LK K P
Sbjct: 68 IISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIP 116
>pdb|3M50|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY
EPIBESTAT
pdb|3M51|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY
PYRROLIDO
Length = 240
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Query: 7 KEELVQRAKLAEQAERYDDMAAAMKAVTET--GVELSNEERNLLSVAYKNVVGARRSSWR 64
+EE V AKLAEQAERY++M M+ V+ + EL+ EERNLLSVAYKNV+GARR+SWR
Sbjct: 8 REENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWR 67
Query: 65 VISSIEQKTE--GSERKQQMAREYREKVEKELRDICYDVLKRSQVKGCP 111
+ISSIEQK E G+E REYR K+E EL IC +LK K P
Sbjct: 68 IISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIP 116
>pdb|1O9C|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3
Regulatory Complex
pdb|1O9D|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3
Regulatory Complex
pdb|1O9E|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3
Regulatory Complex
pdb|1O9F|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3
Regulatory Complex
pdb|3E6Y|A Chain A, Structure Of 14-3-3 In Complex With The
Differentiation-Inducing Agent Cotylenin A
pdb|3E6Y|B Chain B, Structure Of 14-3-3 In Complex With The
Differentiation-Inducing Agent Cotylenin A
Length = 260
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Query: 7 KEELVQRAKLAEQAERYDDMAAAMKAVTET--GVELSNEERNLLSVAYKNVVGARRSSWR 64
+EE V AKLAEQAERY++M M+ V+ + EL+ EERNLLSVAYKNV+GARR+SWR
Sbjct: 8 REENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWR 67
Query: 65 VISSIEQKTE--GSERKQQMAREYREKVEKELRDICYDVLKRSQVKGCP 111
+ISSIEQK E G+E REYR K+E EL IC +LK K P
Sbjct: 68 IISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIP 116
>pdb|2NPM|A Chain A, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein
In Complex With Peptide
pdb|2NPM|B Chain B, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein
In Complex With Peptide
Length = 260
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 73/105 (69%), Gaps = 5/105 (4%)
Query: 3 SSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET---GVELSNEERNLLSVAYKNVVGAR 59
S +E V AKLAEQAERYD+MA MK V E EL+ EERNLLSVAYKN VG+R
Sbjct: 24 SVNARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSR 83
Query: 60 RSSWRVISSIEQK--TEGSERKQQMAREYREKVEKELRDICYDVL 102
RSSWR+ISS+EQK + +E +M +YR KVE EL DIC D+L
Sbjct: 84 RSSWRIISSVEQKEHSRNAEDASKMCGKYRSKVEAELTDICNDIL 128
>pdb|3AXY|C Chain C, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
pdb|3AXY|D Chain D, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
pdb|3AXY|I Chain I, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
pdb|3AXY|J Chain J, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
Length = 240
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 75/104 (72%), Gaps = 4/104 (3%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETG--VELSNEERNLLSVAYKNVVGARRS 61
S +EE V AKLAEQAERY++M M+ V +T EL+ EERNLLSVAYKNV+GARR+
Sbjct: 5 SMSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRA 64
Query: 62 SWRVISSIEQKTE--GSERKQQMAREYREKVEKELRDICYDVLK 103
SWR++SSIEQK E G+E + +EYR K+E EL IC +LK
Sbjct: 65 SWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILK 108
>pdb|4DX0|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A
PYRAZOLE Derivative
Length = 243
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 75/110 (68%), Gaps = 4/110 (3%)
Query: 7 KEELVQRAKLAEQAERYDDMAAAMKAVTETG--VELSNEERNLLSVAYKNVVGARRSSWR 64
+EE V AKLAEQAERY++M M+ V +T EL+ EERNLLSVAYKNV+GARR+SWR
Sbjct: 11 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWR 70
Query: 65 VISSIEQKTE--GSERKQQMAREYREKVEKELRDICYDVLKRSQVKGCPL 112
+ISSIEQK E G+E +EYR K+E EL IC +L + P+
Sbjct: 71 IISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPV 120
>pdb|2K7Q|A Chain A, Filamin A Ig-Like Domains 18-19
Length = 191
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 90 VEKELRDICYDVLKRSQ-VKGCPLKVLVSA--VCDATQVLCSGSGLSVGTLGQDIRSFID 146
V KE + V K Q V P+ V++S + DA++V SG GL G + ID
Sbjct: 62 VPKETGEHLVHVKKNGQHVASSPIPVVISQSEIGDASRVRVSGQGLHEGHTFEPAEFIID 121
Query: 147 TRRAGPGELSAHCVGPNKVAYCELYDHSDGTFTLNVKPQESGRHVLTVKYGD 198
TR AG G LS GP+KV D DGT + P E G +++ +K+ D
Sbjct: 122 TRDAGYGGLSLSIEGPSKVD-INTEDLEDGTCRVTYCPTEPGNYIINIKFAD 172
>pdb|2DJ4|A Chain A, Solution Structure Of The 13th Filamin Domain From Human
Filamin-B
Length = 108
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 117 SAVCDATQVLCSGSGLSVGTLGQDIRSF-IDTRRAGPGELSAHCVGPNK-VAYCELYDHS 174
S V D ++V +G GL G + ++SF +D+ +AG L +GP V + D+
Sbjct: 6 SGVVDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNG 65
Query: 175 DGTFTLNVKPQESGRHVLTVKYGD 198
DGT T+ P + G ++++VKY D
Sbjct: 66 DGTHTVTYTPSQEGPYMVSVKYAD 89
>pdb|2D7M|A Chain A, Solution Structure Of The 14th Filamin Domain From Human
Filamin C
Length = 115
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 117 SAVCDATQVLCSGSGLSVGTLGQ--DIRSFIDTRRAGPGELSAHCVGP-NKVAYCELYDH 173
S DA++V SG GL+ + + ID R AG G L+ + P K + D+
Sbjct: 6 SGAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDN 65
Query: 174 SDGTFTLNVKPQESGRHVLTVKYG 197
DGT+T++ P SGR+ +T+KYG
Sbjct: 66 GDGTYTVSYLPDMSGRYTITIKYG 89
>pdb|2J3S|A Chain A, Crystal Structure Of The Human Filamin A Ig Domains 19 To
21
pdb|2J3S|B Chain B, Crystal Structure Of The Human Filamin A Ig Domains 19 To
21
Length = 288
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 118 AVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGT 177
A+ DA++V SG GL G + IDTR AG G LS GP+KV D DGT
Sbjct: 2 AMGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVD-INTEDLEDGT 60
Query: 178 FTLNVKPQESGRHVLTVKYGD 198
+ P E G +++ +K+ D
Sbjct: 61 CRVTYCPTEPGNYIINIKFAD 81
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 103 KRSQVKGCPLKVLVSAVCD--ATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCV 160
K V G P + V + + A +V G GL G I TR AG G L+
Sbjct: 176 KGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVE 235
Query: 161 GPNKVAYCELYDHSDGTFTLNVKPQESGRHVLTVKY 196
GP+K A D DG+ + QE G + ++VK+
Sbjct: 236 GPSK-AEISFEDRKDGSCGVAYVVQEPGDYEVSVKF 270
>pdb|2E9J|A Chain A, Solution Structure Of The 14th Filamin Domain From Human
Filamin-B
Length = 119
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 111 PLKVLVSAVCDATQVLCSGSGLS----VGTLGQDIRSFIDTRRAGPGELSAHCVGP-NKV 165
P KV V DA++V SG GLS +L D ID R AG G L+ K
Sbjct: 10 PFKVKVLPTYDASKVTASGPGLSSYGVPASLPVDFA--IDARDAGEGLLAVQITDQEGKP 67
Query: 166 AYCELYDHSDGTFTLNVKPQESGRHVLTVKYG 197
++D+ DGT+ + P ++GR+++ V YG
Sbjct: 68 KRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYG 99
>pdb|2DIA|A Chain A, Solution Structure Of The 10th Filamin Domain From Human
Filamin-B
Length = 113
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 117 SAVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKV-AYCELYDHSD 175
S D ++V+ SG GL G +G+ +D AGPG L V + A + ++ D
Sbjct: 6 SGPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKD 65
Query: 176 GTFTLNVKPQESGRHVLTVKYG 197
GT+ + P +G + LT+KYG
Sbjct: 66 GTYAVTYVPLTAGMYTLTMKYG 87
>pdb|3RGH|A Chain A, Structure Of Filamin A Immunoglobulin-Like Repeat 10 From
Homo Sapiens
pdb|3RGH|B Chain B, Structure Of Filamin A Immunoglobulin-Like Repeat 10 From
Homo Sapiens
Length = 100
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 121 DATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELY--DHSDGTF 178
DA++V CSG GL T G+ + +D AG EL+ + E+Y DH DGT
Sbjct: 7 DASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEIXSEAGLP-AEVYIQDHGDGTH 65
Query: 179 TLNVKPQESGRHVLTVKYG 197
T+ P G + +T+KYG
Sbjct: 66 TITYIPLCPGAYTVTIKYG 84
>pdb|2K7P|A Chain A, Filamin A Ig-Like Domains 16-17
Length = 188
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 96 DICYDVLKRSQVKGCPLKVLVSAVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGEL 155
DI YD + + G PL+ V V + V G GL+ G + + ++T+ AG G L
Sbjct: 75 DIRYDNM---HIPGSPLQFYVDYV-NCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGL 130
Query: 156 SAHCVGPNKVAYCELYDHSDGTFTLNVKPQESGRHVLTVKY 196
S GP+K A D+ DGT +++ P G + + VKY
Sbjct: 131 SLAIEGPSK-AEISCTDNQDGTCSVSYLPVLPGDYSILVKY 170
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 153 GELSAHCVGPN-KVAYCELYDHSDGTFTLNVKPQESGRHVLTVKYGDL 199
GE++ P+ KVA + D+ DGT T+ P E+G H + ++Y ++
Sbjct: 34 GEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNM 81
>pdb|2EE6|A Chain A, Solution Structure Of The 21th Filamin Domain From Human
Filamin-B
Length = 105
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 122 ATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGTFTLN 181
A +V G GL G G I TR AG G LS GP+K A DH +G+ ++
Sbjct: 11 AHKVRAGGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSK-AEITFDDHKNGSCGVS 69
Query: 182 VKPQESGRHVLTVKYGD 198
QE G + +++K+ D
Sbjct: 70 YIAQEPGNYEVSIKFND 86
>pdb|2EEC|A Chain A, Solution Structure Of The 23th Filamin Domain From Human
Filamin-B
Length = 125
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 144 FIDTRRAGPGELSAHCVGPNKVAY-CELYDHSDGTFTLNVKPQESGRHVLTVKYG 197
FI+T RAGPG LS GP+KV C+ + +G + + P G ++++VKYG
Sbjct: 43 FINTTRAGPGTLSVTIEGPSKVKMDCQ--ETPEG-YKVMYTPMAPGNYLISVKYG 94
>pdb|2DIB|A Chain A, Solution Structure Of The 11th Filamin Domain From Human
Filamin-B
Length = 128
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 111 PLKVLVSAVCDATQVLCSGSGLSVGTLGQDI-----RSF-IDTR---RAGPGELSAHCVG 161
P +V V D +++ G G+ G+D+ F +D+R + G + AH
Sbjct: 10 PARVKVEPAVDTSRIKVFGPGIE----GKDVFREATTDFTVDSRPLTQVGGDHIKAHIAN 65
Query: 162 PNKVAY-CELYDHSDGTFTLNVKPQESGRHVLTVKYGDL 199
P+ + C + D++DGT+ + P E G HV+ V Y D+
Sbjct: 66 PSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDV 104
>pdb|2K9U|A Chain A, Solution Nmr Structure Of The Filamin-Migfilin Complex
Length = 119
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 122 ATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGTFTLN 181
A +V G+GL G G I TR AG G LS GP+K A D DG+ ++
Sbjct: 18 AHKVRAGGTGLERGVAGVPAEFSIWTREAGAGGLSIAVEGPSK-AEIAFEDRKDGSCGVS 76
Query: 182 VKPQESGRHVLTVKYGD 198
QE G + +++K+ D
Sbjct: 77 YVVQEPGDYEVSIKFND 93
>pdb|2DI9|A Chain A, Solution Structure Of The 9th Filamin Domain From Human
Filamin-B
Length = 131
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 96 DICYDVLKRSQVKGCPLKVLVSAVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGEL 155
D+ YD V G P V S D ++V G GL G +G+ IDT+ AG G L
Sbjct: 8 DVTYD---GHPVPGSPYTVEASLPPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGL 64
Query: 156 SAHCVGPNKVAYCELYDHSDGTFTLNVKPQESGRHVLTVKY 196
GP + A E D+ DGT +++ P + G + + + +
Sbjct: 65 GLTVEGPCE-AKIECSDNGDGTCSVSYLPTKPGEYFVNILF 104
>pdb|1V05|A Chain A, Dimerization Of Human Filamin C: Crystal Structure Of The
Domain 24
Length = 96
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 121 DATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGTFTL 180
DA++V+ G GLS +GQ +D +AG + GP K E+Y G
Sbjct: 5 DASKVVTRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGP-KTPCEEVYVKHMGNRVY 63
Query: 181 NV--KPQESGRHVLTVKYGD 198
NV +E G ++L VK+GD
Sbjct: 64 NVTYTVKEKGDYILIVKWGD 83
>pdb|2DI8|A Chain A, Solution Structure Of The 19th Filamin Domain From Human
Filamin-B
Length = 111
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 121 DATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGTFTL 180
DA + G GLS G + +DTR AG G +S GP+KV + D DGT +
Sbjct: 10 DARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVD-IQTEDLEDGTCKV 68
Query: 181 NVKPQESGRHVLTVKYGD 198
+ P G ++++ K+ D
Sbjct: 69 SYFPTVPGVYIVSTKFAD 86
>pdb|2DMB|A Chain A, Solution Structure Of The 15th Filamin Domain From Human
Filamin-B
Length = 124
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 121 DATQVLCSGSGL-SVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKV-AYCELYDHSDGTF 178
DA++ L +G G+ S G+++ +D + AG G+++ + P+ A ++ ++ DGT+
Sbjct: 10 DASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGTEAEADVIENEDGTY 69
Query: 179 TLNVKPQESGRHVLTVKYGDL 199
+ + G +V+ V++G +
Sbjct: 70 DIFYTAAKPGTYVIYVRFGGV 90
>pdb|2BP3|A Chain A, Crystal Structure Of Filamin A Domain 17 And Gpib Alpha
Cytoplasmic Domain Complex
pdb|2BP3|B Chain B, Crystal Structure Of Filamin A Domain 17 And Gpib Alpha
Cytoplasmic Domain Complex
Length = 97
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 118 AVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGT 177
A+ + V G GL+ G + + ++T+ AG G LS GP+K A D+ DGT
Sbjct: 2 AMVNCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSK-AEISCTDNQDGT 60
Query: 178 FTLNVKPQESGRHVLTVKY 196
+++ P G + + VKY
Sbjct: 61 CSVSYLPVLPGDYSILVKY 79
>pdb|2D7O|A Chain A, Solution Structure Of The 17th Filamin Domain From Human
Filamin C
Length = 111
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 117 SAVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDG 176
S ++ V G GLS G + + I T+ AG G LS GP+K A D+ DG
Sbjct: 6 SGAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSK-AEITCKDNKDG 64
Query: 177 TFTLNVKPQESGRHVLTVKYGD 198
T T++ P G + + V++ D
Sbjct: 65 TCTVSYLPTAPGDYSIIVRFDD 86
>pdb|2AAV|A Chain A, Solution Nmr Structure Of Filamin A Domain 17
Length = 98
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 119 VCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGTF 178
V + V G GL+ G + + ++T+ AG G LS GP+K A D+ DGT
Sbjct: 4 VVNCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSK-AEISCTDNQDGTC 62
Query: 179 TLNVKPQESGRHVLTVKY 196
+++ P G + + VKY
Sbjct: 63 SVSYLPVLPGDYSILVKY 80
>pdb|2K3T|A Chain A, Solution Structure Of Ig-Like Domain 23 From Human Filamin
A
Length = 99
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 117 SAVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAY-CELYDHSD 175
A+ D V G+GL G G ++T AG G LS GP+KV C+ + +
Sbjct: 1 GAMGDPGLVSAYGAGLEGGVTGNPAEFVVNTSNAGAGALSVTIDGPSKVKMDCQ--ECPE 58
Query: 176 GTFTLNVKPQESGRHVLTVKYG 197
G + + P G +++++KYG
Sbjct: 59 G-YRVTYTPMAPGSYLISIKYG 79
>pdb|2EEA|A Chain A, Solution Structure Of The 17th Filamin Domain From Human
Filamin-B
Length = 115
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 111 PLKVLVSAVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCEL 170
PL+ V+ ++ V G GL G + I T AG G L GP+K A
Sbjct: 11 PLQFYVN-YPNSGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSK-AEISC 68
Query: 171 YDHSDGTFTLNVKPQESGRHVLTVKYGD 198
D+ DGT T+ P G + + VKY D
Sbjct: 69 IDNKDGTCTVTYLPTLPGDYSILVKYND 96
>pdb|2BRQ|A Chain A, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Integrin Beta7 Cytoplasmic Tail Peptide
pdb|2BRQ|B Chain B, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Integrin Beta7 Cytoplasmic Tail Peptide
pdb|2JF1|A Chain A, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Integrin Beta2 Cytoplasmic Tail Peptide
Length = 97
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 118 AVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGT 177
A+ A +V G GL G I TR AG G L+ GP+K A D DG+
Sbjct: 2 AMGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSK-AEISFEDRKDGS 60
Query: 178 FTLNVKPQESGRHVLTVKY 196
+ QE G + ++VK+
Sbjct: 61 CGVAYVVQEPGDYEVSVKF 79
>pdb|2D7N|A Chain A, Solution Structure Of The 16th Filamin Domain From Human
Filamin C
Length = 93
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 153 GELSAHCVGPN-KVAYCELYDHSDGTFTLNVKPQESGRHVLTVKY 196
GEL+ P+ K A + D+ DGT T+ P E G H + +KY
Sbjct: 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKY 66
>pdb|2EE9|A Chain A, Solution Structure Of The 16th Filamin Domain From Human
Filamin-B
Length = 95
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 153 GELSAHCVGPN-KVAYCELYDHSDGTFTLNVKPQESGRHVLTVKY 196
GE++ P+ K A E+ D+ DGT T+ P E G H + +KY
Sbjct: 30 GEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKY 74
>pdb|2EED|A Chain A, Solution Structure Of The 24th Filamin Domain From Human
Filamin-B
Length = 101
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 121 DATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCE---LYDHSDGT 177
DA++V G+GLS +GQ +D +AG L GP CE + +
Sbjct: 10 DASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGPT--TPCEEVSMKHVGNQQ 67
Query: 178 FTLNVKPQESGRHVLTVKYGD 198
+ + +E G +VL VK+G+
Sbjct: 68 YNVTYVVKERGDYVLAVKWGE 88
>pdb|2W0P|A Chain A, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Migfilin Peptide
pdb|2W0P|B Chain B, Crystal Structure Of The Filamin A Repeat 21 Complexed
With The Migfilin Peptide
Length = 94
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 122 ATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGTFTLN 181
A +V G GL G I TR AG G L+ GP+K A D DG+ +
Sbjct: 3 AHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSK-AEISFEDRKDGSCGVA 61
Query: 182 VKPQESGRHVLTVKY 196
QE G + ++VK+
Sbjct: 62 YVVQEPGDYEVSVKF 76
>pdb|3ISW|A Chain A, Crystal Structure Of Filamin-A Immunoglobulin-Like Repeat
21 An N-Terminal Peptide Of Cftr
pdb|3ISW|B Chain B, Crystal Structure Of Filamin-A Immunoglobulin-Like Repeat
21 An N-Terminal Peptide Of Cftr
Length = 99
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 122 ATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAYCELYDHSDGTFTLN 181
A +V G GL G I TR AG G L+ GP+K A D DG+ +
Sbjct: 8 AHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSK-AEISFEDRKDGSCGVA 66
Query: 182 VKPQESGRHVLTVKY 196
QE G + ++VK+
Sbjct: 67 YVVQEPGDYEVSVKF 81
>pdb|2D7Q|A Chain A, Solution Structure Of The 23th Filamin Domain From Human
Filamin C
Length = 111
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 121 DATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAY-C-ELYDHSDGTF 178
D V G GL GT G ++T AG G LS GP+KV C E + T+
Sbjct: 10 DPGLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGHVVTY 69
Query: 179 TLNVKPQESGRHVLTVKYG 197
T P G +++ +KYG
Sbjct: 70 T----PMAPGNYLIAIKYG 84
>pdb|2NQC|A Chain A, Crystal Structure Of Ig-Like Domain 23 From Human Filamin
C
Length = 138
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 117 SAVCDATQVLCSGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPNKVAY-C-ELYDHS 174
S D V G GL GT G ++T AG G LS GP+KV C E +
Sbjct: 40 SQAGDPGLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGH 99
Query: 175 DGTFTLNVKPQESGRHVLTVKYG 197
T+T P G +++ +KYG
Sbjct: 100 VVTYT----PMAPGNYLIAIKYG 118
>pdb|3SDX|A Chain A, Crystal Structure Of Human Autoreactive-Valpha24 Nkt Tcr
In Complex With Cd1d-Beta-Galactosylceramide
pdb|3SDX|C Chain C, Crystal Structure Of Human Autoreactive-Valpha24 Nkt Tcr
In Complex With Cd1d-Beta-Galactosylceramide
Length = 275
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 77 ERKQQMAREYREKVEKELRDICYDVLKRSQVKGCPLKVLVSAVCDATQVLCSGSGLSVGT 136
E Q + R YR +++++ +L+ S PL++ VSA C+ S + V
Sbjct: 59 ETLQHIFRVYRSSFTRDVKEFA-KMLRLS----YPLELQVSAGCEVHPGNASNNFFHVAF 113
Query: 137 LGQDIRSFIDT 147
G+DI SF T
Sbjct: 114 QGKDILSFQGT 124
>pdb|1ZT4|A Chain A, The Crystal Structure Of Human Cd1d With And Without
Alpha- Galactosylceramide
pdb|1ZT4|C Chain C, The Crystal Structure Of Human Cd1d With And Without
Alpha- Galactosylceramide
Length = 281
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 77 ERKQQMAREYREKVEKELRDICYDVLKRSQVKGCPLKVLVSAVCDATQVLCSGSGLSVGT 136
E Q + R YR +++++ +L+ S PL++ VSA C+ S + V
Sbjct: 64 ETLQHIFRVYRSSFTRDVKEFA-KMLRLS----YPLELQVSAGCEVHPGNASNNFFHVAF 118
Query: 137 LGQDIRSFIDT 147
G+DI SF T
Sbjct: 119 QGKDILSFQGT 129
>pdb|3TZV|C Chain C, Crystal Structure Of An Inkt Tcr In Complex With Cd1d-
Lysophosphatidylcholine
Length = 276
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 77 ERKQQMAREYREKVEKELRDICYDVLKRSQVKGCPLKVLVSAVCDATQVLCSGSGLSVGT 136
E Q + R YR +++++ +L+ S PL++ VSA C+ S + V
Sbjct: 63 ETLQHIFRVYRSSFTRDVKEFA-KMLRLS----YPLELQVSAGCEVHPGQASNNFFHVAF 117
Query: 137 LGQDIRSFIDT 147
G+DI SF T
Sbjct: 118 QGKDILSFQGT 128
>pdb|2DLG|A Chain A, Solution Structure Of The 20th Filamin Domain From Human
Filamin-B
Length = 102
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 128 SGSGLSVGTLGQDIRSFIDTRRAGPGELSAHCVGPN-KVAYCELYDHSDGTFTLNVKPQE 186
SG SV T+G + ++SAH P+ +V E+ + + PQE
Sbjct: 6 SGRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQE 65
Query: 187 SGRHVLTVKY 196
G H ++VKY
Sbjct: 66 MGVHTVSVKY 75
>pdb|3U0P|A Chain A, Crystal Structure Of Human Cd1d-Lysophosphatidylcholine
pdb|3U0P|C Chain C, Crystal Structure Of Human Cd1d-Lysophosphatidylcholine
pdb|3U0P|E Chain E, Crystal Structure Of Human Cd1d-Lysophosphatidylcholine
Length = 284
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 77 ERKQQMAREYREKVEKELRDICYDVLKRSQVKGCPLKVLVSAVCDATQVLCSGSGLSVGT 136
E Q + R YR +++++ +L+ S PL++ VSA C+ S + V
Sbjct: 65 ETLQHIFRVYRSSFTRDVKEFA-KMLRLS----YPLELQVSAGCEVHPGQASNNFFHVAF 119
Query: 137 LGQDIRSFIDT 147
G+DI SF T
Sbjct: 120 QGKDILSFQGT 130
>pdb|3EFZ|A Chain A, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
pdb|3EFZ|B Chain B, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
pdb|3EFZ|C Chain C, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
pdb|3EFZ|D Chain D, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
Length = 268
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 13 RAKLAEQAERYDDMAAAMKAVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQK 72
RAKLA+ Y D+ +K +TE+ N LL+ + +N V + R+S + I S E+K
Sbjct: 35 RAKLADMVGNYKDV---IKVLTESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEK 91
Query: 73 TEGSERKQQMAREYREKVEKELRDICYDVLKRSQ 106
+++ + E+ + +E RD +L S+
Sbjct: 92 L---RKEKSLNNEFIQVIEDIKRDFEESILLESE 122
>pdb|2E9I|A Chain A, Solution Structure Of The N-Terminal Extended 20th Filamin
Domain From Human Filamin-B
Length = 106
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 154 ELSAHCVGPN-KVAYCELYDHSDGTFTLNVKPQESGRHVLTVKY 196
++SAH P+ +V E+ + + PQE G H ++VKY
Sbjct: 42 DMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKY 85
>pdb|3HUJ|A Chain A, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide
In Complex With Semi-Invariant Nkt Cell Receptor
pdb|3HUJ|C Chain C, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide
In Complex With Semi-Invariant Nkt Cell Receptor
pdb|3VWJ|A Chain A, Ternary Crystal Structure Of The Human Nkt Tcr-Cd1d-C20:2
Complex
pdb|3VWK|A Chain A, Ternary Crystal Structure Of The Human Nkt
Tcr-Cd1d-4'deoxy-Alpha- Galactosylceramide Complex
Length = 284
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 77 ERKQQMAREYREKVEKELRDICYDVLKRSQVKGCPLKVLVSAVCDATQVLCSGSGLSVGT 136
E Q + R YR +++++ +L+ S PL++ VSA C+ S + V
Sbjct: 65 ETLQHIFRVYRSSFTRDVKEFA-KMLRLS----YPLELQVSAGCEVHPGNASNNFFHVAF 119
Query: 137 LGQDIRSFIDT 147
G+DI SF T
Sbjct: 120 QGKDILSFQGT 130
>pdb|2PO6|A Chain A, Crystal Structure Of Cd1d-lipid-antigen Complexed With
Beta-2- Microglobulin, Nkt15 Alpha-chain And Nkt15
Beta-chain
pdb|2PO6|E Chain E, Crystal Structure Of Cd1d-lipid-antigen Complexed With
Beta-2- Microglobulin, Nkt15 Alpha-chain And Nkt15
Beta-chain
Length = 278
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 77 ERKQQMAREYREKVEKELRDICYDVLKRSQVKGCPLKVLVSAVCDATQVLCSGSGLSVGT 136
E Q + R YR +++++ +L+ S PL++ VSA C+ S + V
Sbjct: 59 ETLQHIFRVYRSSFTRDVKEFA-KMLRLSY----PLELQVSAGCEVHPGNASNNFFHVAF 113
Query: 137 LGQDIRSFIDT 147
G+DI SF T
Sbjct: 114 QGKDILSFQGT 124
>pdb|4EN3|C Chain C, Crystal Structure Of A Human Valpha24(-) Nkt Tcr In
Complex With Cd1dALPHA-Galactosylceramide
Length = 284
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 77 ERKQQMAREYREKVEKELRDICYDVLKRSQVKGCPLKVLVSAVCDATQVLCSGSGLSVGT 136
E Q + R YR +++++ +L+ S PL++ VSA C+ S + V
Sbjct: 65 ETLQHIFRVYRSSFTRDVKEFA-KMLRLS----YPLELQVSAGCEVHPGNASNNFFHVAF 119
Query: 137 LGQDIRSFIDT 147
G+DI SF T
Sbjct: 120 QGKDILSFQGT 130
>pdb|2CRH|A Chain A, Solution Structure Of The Sh2 Domain Of Human Proto-
Oncogene Protein Vav1
pdb|2ROR|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A
Tyrosine-Phosphorylated Peptide From Slp76
Length = 138
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 152 PGELSAHC--VGPNKVAYCE--LYDHSDGTFTLNVKPQESGRHVLTVKY 196
P +LS H GP + A E L + SDGTF + + +++ +++KY
Sbjct: 20 PQDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKY 68
>pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
pdb|3J08|B Chain B, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
Length = 645
Score = 27.7 bits (60), Expect = 4.4, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEER 45
+G++ EL++ A +AE+ + A +K E G+EL E+
Sbjct: 351 NGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEK 392
>pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
pdb|3J09|B Chain B, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
Length = 723
Score = 27.3 bits (59), Expect = 5.4, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 4 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVELSNEER 45
+G++ EL++ A +AE+ + A +K E G+EL E+
Sbjct: 429 NGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEK 470
>pdb|2LNW|A Chain A, Identification And Structural Basis For A Novel
Interaction Between Vav2 And Arap3
pdb|2LNX|A Chain A, Solution Structure Of Vav2 Sh2 Domain
Length = 122
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 170 LYDHSDGTFTLNVKPQESGRHVLTVKYGD 198
L H+ GT+ + +P E+ R +++K+ D
Sbjct: 38 LKSHASGTYLIRERPAEAERFAISIKFND 66
>pdb|2DLZ|A Chain A, Solution Structure Of The Sh2 Domain Of Human Protein
Vav-2
Length = 118
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 170 LYDHSDGTFTLNVKPQESGRHVLTVKYGD 198
L H+ GT+ + +P E+ R +++K+ D
Sbjct: 32 LKSHASGTYLIRERPAEAERFAISIKFND 60
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.129 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,466,033
Number of Sequences: 62578
Number of extensions: 205956
Number of successful extensions: 596
Number of sequences better than 100.0: 88
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 482
Number of HSP's gapped (non-prelim): 91
length of query: 201
length of database: 14,973,337
effective HSP length: 94
effective length of query: 107
effective length of database: 9,091,005
effective search space: 972737535
effective search space used: 972737535
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 49 (23.5 bits)