BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5368
(406 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+++I++Y +GG+L S +R ++ + + ++ LAL++L ++ + DLKP+NIL+
Sbjct: 81 IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD 140
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
KN +K+ DFGFA+++ D + G+P Y+APE+++ PYN D WS G+L++E L
Sbjct: 141 KNGHIKITDFGFAKYVP--DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI-----SYEDL 288
G+ P+ N + + L +A + PP + D D LSRL+ +D +R+ ED+
Sbjct: 199 GYTPFYDSNTMKTYEKIL-NAELRFPP-FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDV 256
Query: 289 FSHPY 293
+HP+
Sbjct: 257 KNHPW 261
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
YI+LE +GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+ +
Sbjct: 89 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 148
Query: 176 NT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG---SPYNAKADLWSLGVLV 228
+K+ DFG ++ L ++ G+P Y+APE+L + YN D WSLGV++
Sbjct: 149 QEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISY 285
F L G+ P++ ++S P +S +D + +LL DP R +
Sbjct: 209 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 268
Query: 286 EDLFSHPY 293
E+ HP+
Sbjct: 269 EEALRHPW 276
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
YI+LE +GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+ +
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149
Query: 176 NT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG---SPYNAKADLWSLGVLV 228
+K+ DFG ++ L ++ G+P Y+APE+L + YN D WSLGV++
Sbjct: 150 QEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISY 285
F L G+ P++ ++S P +S +D + +LL DP R +
Sbjct: 210 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Query: 286 EDLFSHPY 293
E+ HP+
Sbjct: 270 EEALRHPW 277
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
YI+LE +GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+ +
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149
Query: 176 NT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG---SPYNAKADLWSLGVLV 228
+K+ DFG ++ L ++ G+P Y+APE+L + YN D WSLGV++
Sbjct: 150 QEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISY 285
F L G+ P++ ++S P +S +D + +LL DP R +
Sbjct: 210 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Query: 286 EDLFSHPY 293
E+ HP+
Sbjct: 270 EEALRHPW 277
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
YI+LE +GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+ +
Sbjct: 96 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 155
Query: 176 NT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG---SPYNAKADLWSLGVLV 228
+K+ DFG ++ L ++ G+P Y+APE+L + YN D WSLGV++
Sbjct: 156 QEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISY 285
F L G+ P++ ++S P +S +D + +LL DP R +
Sbjct: 216 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 275
Query: 286 EDLFSHPY 293
E+ HP+
Sbjct: 276 EEALRHPW 283
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
YI+LE +GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+ +
Sbjct: 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149
Query: 176 NT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG---SPYNAKADLWSLGVLV 228
+K+ DFG ++ L ++ G+P Y+APE+L + YN D WSLGV++
Sbjct: 150 QEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISY 285
F L G+ P++ ++S P +S +D + +LL DP R +
Sbjct: 210 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Query: 286 EDLFSHPY 293
E+ HP+
Sbjct: 270 EEALRHPW 277
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y+I+EY GG++ ++ +H ++ E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 84 KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLL 143
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ + D+ GSP Y APE+ G Y+ + D+WSLGV+++
Sbjct: 144 LDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 203
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P +S DC + L R L +P++R + E +
Sbjct: 204 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 261
Query: 291 HPYPDLIH 298
+ + H
Sbjct: 262 DRWINAGH 269
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
YI+LE +GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+ +
Sbjct: 229 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 288
Query: 176 NT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG---SPYNAKADLWSLGVLV 228
+K+ DFG ++ L ++ G+P Y+APE+L + YN D WSLGV++
Sbjct: 289 QEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 348
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISY 285
F L G+ P++ ++S P +S +D + +LL DP R +
Sbjct: 349 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 408
Query: 286 EDLFSHPY 293
E+ HP+
Sbjct: 409 EEALRHPW 416
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
YI+LE +GG+L + +++L E C+ + Q++LA+++L EN + H DLKP+N+L+ +
Sbjct: 215 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 274
Query: 176 NT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG---SPYNAKADLWSLGVLV 228
+K+ DFG ++ L ++ G+P Y+APE+L + YN D WSLGV++
Sbjct: 275 QEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISY 285
F L G+ P++ ++S P +S +D + +LL DP R +
Sbjct: 335 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 394
Query: 286 EDLFSHPY 293
E+ HP+
Sbjct: 395 EEALRHPW 402
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 103/190 (54%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL-- 172
V +ILE GG+L F+ E L+E + QF++Q++ + +L + HFDLKP+NI+
Sbjct: 83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 142
Query: 173 ---IKNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ N +KL DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 143 DKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 202
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + + L++ ++ S DF+ RLL KDP RR+
Sbjct: 203 ILLSGASPF----LGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 258
Query: 284 SYEDLFSHPY 293
+ H +
Sbjct: 259 TIAQSLEHSW 268
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y+I+EY GG++ ++ +H ++ E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 87 KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLL 146
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ + D+ G+P Y APE+ G Y+ + D+WSLGV+++
Sbjct: 147 LDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P +S DC + L R L +P++R + E +
Sbjct: 207 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264
Query: 291 HPYPDLIH 298
+ + H
Sbjct: 265 DRWINAGH 272
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 102/190 (53%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL-- 172
V +ILE GG+L F+ E L+E + QF++Q++ + +L + HFDLKP+NI+
Sbjct: 104 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 163
Query: 173 ---IKNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ N +KL DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 164 DKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 223
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + + L++ ++ S DF+ RLL KDP RR+
Sbjct: 224 ILLSGASPF----LGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 279
Query: 284 SYEDLFSHPY 293
H +
Sbjct: 280 XIAQSLEHSW 289
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
++++LEYC GG+L +I S ++LSE + + RQ+V A+ ++ H DLKP+N+L
Sbjct: 83 IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD 142
Query: 175 N-NTLKLADFGFAQFLAPNDQGD----SIQGSPLYMAPEILAGSPY-NAKADLWSLGVLV 228
+ LKL DFG P D + GS Y APE++ G Y ++AD+WS+G+L+
Sbjct: 143 EYHKLKLIDFGLCA--KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
+ + G P+ N+ L + + P LSP + L ++LQ DP +RIS ++L
Sbjct: 201 YVLMCGFLPFDDDNVMALYKKIMRGKYDV--PKWLSPSSILLLQQMLQVDPKKRISMKNL 258
Query: 289 FSHPY 293
+HP+
Sbjct: 259 LNHPW 263
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 102/190 (53%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL-- 172
V +ILE GG+L F+ E L+E + QF++Q++ + +L + HFDLKP+NI+
Sbjct: 90 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 149
Query: 173 ---IKNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ N +KL DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 150 DKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + + L++ ++ S DF+ RLL KDP RR+
Sbjct: 210 ILLSGASPF----LGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 265
Query: 284 SYEDLFSHPY 293
H +
Sbjct: 266 XIAQSLEHSW 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 107/188 (56%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y+++EY GG++ ++ +H ++ E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ ++ D+ GSP Y APE+ G Y+ + D+WSLGV+++
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P +S DC + L + L +P +R + E +
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
Query: 291 HPYPDLIH 298
+ ++ H
Sbjct: 264 DRWMNVGH 271
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 107/188 (56%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y+++EY GG++ ++ +H ++ E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ ++ D+ GSP Y APE+ G Y+ + D+WSLGV+++
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P +S DC + L + L +P +R + E +
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
Query: 291 HPYPDLIH 298
+ ++ H
Sbjct: 264 DRWMNVGH 271
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 107/188 (56%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y+++EY GG++ ++ +H ++ E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ ++ D+ GSP Y APE+ G Y+ + D+WSLGV+++
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P +S DC + L + L +P +R + E +
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
Query: 291 HPYPDLIH 298
+ ++ H
Sbjct: 264 DRWMNVGH 271
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 88 TSHSEFERPRAGLSNLRAP------EGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQ 141
S + ER + L ++ P E + V +ILE GG+L F+ E L+E +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-----LKLADFGFAQFLAPNDQGD 196
+F++Q++ + +L + HFDLKP+NI++ + +K+ DFG A + ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 197 SIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPI 256
+I G+P ++APEI+ P +AD+WS+GV+ + L G +P+ L + + L++
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----LGDTKQETLANVSA 231
Query: 257 TIPP------NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
++ S DF+ RLL KDP +R++ +D HP+
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y+++EY GG++ ++ +H ++ E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ ++ D GSP Y APE+ G Y+ + D+WSLGV+++
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P +S DC + L + L +P +R + E +
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
Query: 291 HPYPDLIH 298
+ ++ H
Sbjct: 264 DRWMNVGH 271
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 88 TSHSEFERPRAGLSNLRAP------EGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQ 141
S + ER + L ++ P E + V +ILE GG+L F+ E L+E +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-----LKLADFGFAQFLAPNDQGD 196
+F++Q++ + +L + HFDLKP+NI++ + +K+ DFG A + ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 197 SIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPI 256
+I G+P ++APEI+ P +AD+WS+GV+ + L G +P+ L + + L++
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----LGDTKQETLANVSA 231
Query: 257 TIPP------NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
++ S DF+ RLL KDP +R++ +D HP+
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 88 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 147
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 148 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 207
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 208 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 263
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 264 TIQDSLQHPW 273
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 88 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 147
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 148 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 207
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 208 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 263
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 264 TIQDSLQHPW 273
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 107/188 (56%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y+++EY GG++ ++ +H ++ E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ ++ D+ G+P Y APE+ G Y+ + D+WSLGV+++
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P +S DC + L + L +P +R + E +
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
Query: 291 HPYPDLIH 298
+ ++ H
Sbjct: 264 DRWMNVGH 271
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 170
+YI++E C+GG+L I S + LSE + ++Q++ AL + +V H DLKP+N
Sbjct: 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPEN 154
Query: 171 ILIKNNT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGV 226
IL ++ + +K+ DFG A+ ++ + G+ LYMAPE+ K D+WS GV
Sbjct: 155 ILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGV 213
Query: 227 LVFEALFGHAPYASCNLSQLRAQALSSAP-ITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+++ L G P+ +L +++ +A P + L+P +D L ++L KDP RR S
Sbjct: 214 VMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSA 273
Query: 286 EDLFSHPY 293
+ H +
Sbjct: 274 AQVLHHEW 281
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 147/303 (48%), Gaps = 31/303 (10%)
Query: 59 YGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRK------RP 112
+G+++ T +Q ++ S+ H ER + L LR P K P
Sbjct: 22 FGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP 81
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +++EY GG+L +I ++++E + ++F +Q++ A+++ + + H DLKP+N+L
Sbjct: 82 TDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLL 140
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ +N +K+ADFG + + + + GSP Y APE++ G Y + D+WS G++++
Sbjct: 141 LDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYV 200
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
L G P+ + L + S + + P+ LSP + R++ DPM+RI+ +++
Sbjct: 201 MLVGRLPFDDEFIPNLFKKVNSC--VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258
Query: 291 HPY-----PDL---------------IHAPCAESHQTAIRIVTDAIHHDRENNSRRAFSL 330
P+ PD I + E+ + + +A+ D N + A++L
Sbjct: 259 DPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYIVEALRSDENNEVKEAYNL 318
Query: 331 YCE 333
E
Sbjct: 319 LHE 321
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+++++EY GG L + + + E Q R+ + AL+FL N V H D+K NIL+
Sbjct: 92 LWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 174 KNNTLKLADFGFAQFLAPNDQGDS-IQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ ++KL DFGF + P S + G+P +MAPE++ Y K D+WSLG++ E +
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 233 FGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
G PY + N L L A + P P LS DFL+R L+ D +R S ++L H
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270
Query: 292 PY 293
+
Sbjct: 271 QF 272
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+++++EY GG L + + + E Q R+ + AL+FL N V H D+K NIL+
Sbjct: 93 LWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 151
Query: 174 KNNTLKLADFGFAQFLAPNDQGDS-IQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ ++KL DFGF + P S + G+P +MAPE++ Y K D+WSLG++ E +
Sbjct: 152 MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
Query: 233 FGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
G PY + N L L A + P P LS DFL+R L+ D +R S ++L H
Sbjct: 212 EGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQH 271
Query: 292 PY 293
+
Sbjct: 272 QF 273
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y+++EY GG++ ++ +H + E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 79 KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLL 138
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ ++ D+ GSP Y APE+ G Y+ + D+WSLGV+++
Sbjct: 139 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 198
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P +S DC + L + L +P +R + E +
Sbjct: 199 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMK 256
Query: 291 HPYPDLIH 298
+ ++ H
Sbjct: 257 DRWMNVGH 264
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+++++EY GG L + + + E Q R+ + AL+FL N V H D+K NIL+
Sbjct: 92 LWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 174 KNNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ ++KL DFGF AQ + ++ G+P +MAPE++ Y K D+WSLG++ E +
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 233 FGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
G PY + N L L A + P P LS DFL+R L D +R S ++L H
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270
Query: 292 PY 293
+
Sbjct: 271 QF 272
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+++++ + G+L ++ LSE + + +R L+ A+ FL NN+ H DLKP+NIL+
Sbjct: 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL 233
Query: 174 KNNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS------PYNAKADLWSLGV 226
+N ++L+DFGF+ L P ++ + G+P Y+APEIL S Y + DLW+ GV
Sbjct: 234 DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGV 293
Query: 227 LVFEALFGHAP-YASCNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRIS 284
++F L G P + + LR + P + S D +SRLLQ DP R++
Sbjct: 294 ILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT 353
Query: 285 YEDLFSHPY 293
E HP+
Sbjct: 354 AEQALQHPF 362
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 4/182 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+++++EY GG L + + + E Q R+ + AL+FL N V H D+K NIL+
Sbjct: 92 LWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 174 KNNTLKLADFGFAQFLAPNDQGDS-IQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ ++KL DFGF + P S + G+P +MAPE++ Y K D+WSLG++ E +
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 233 FGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
G PY + N L L A + P P LS DFL+R L D +R S ++L H
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270
Query: 292 PY 293
+
Sbjct: 271 QF 272
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 4/182 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+++++EY GG L + + + E Q R+ + AL+FL N V H ++K NIL+
Sbjct: 93 LWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLG 151
Query: 174 KNNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ ++KL DFGF AQ + ++ G+P +MAPE++ Y K D+WSLG++ E +
Sbjct: 152 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
Query: 233 FGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
G PY + N L L A + P P LS DFL+R L+ D +R S ++L H
Sbjct: 212 EGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQH 271
Query: 292 PY 293
+
Sbjct: 272 QF 273
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++
Sbjct: 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +KL DFG A + + +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPD---CMDFLSRLLQKDPMRRISYE 286
L G +P+ + A ++S S DF+ +LL K+ +R++ +
Sbjct: 210 ILLSGASPFLGDTKQETLAN-ITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ 268
Query: 287 DLFSHPY 293
+ HP+
Sbjct: 269 EALRHPW 275
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 109/188 (57%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y+++EY GG++ ++ +H ++ E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 87 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLL 146
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ ++ D+ GSP Y APE+ G Y+ + D+WSLGV+++
Sbjct: 147 LDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P +S DC + L +LL +P++R S E +
Sbjct: 207 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKLLVLNPIKRGSLEQIMK 264
Query: 291 HPYPDLIH 298
+ ++ H
Sbjct: 265 DRWMNVGH 272
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++
Sbjct: 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +KL DFG A + + +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPD---CMDFLSRLLQKDPMRRISYE 286
L G +P+ + A ++S S DF+ +LL K+ +R++ +
Sbjct: 210 ILLSGASPFLGDTKQETLAN-ITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ 268
Query: 287 DLFSHPY 293
+ HP+
Sbjct: 269 EALRHPW 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++
Sbjct: 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +KL DFG A + + +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPD---CMDFLSRLLQKDPMRRISYE 286
L G +P+ + A ++S S DF+ +LL K+ +R++ +
Sbjct: 210 ILLSGASPFLGDTKQETLAN-ITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ 268
Query: 287 DLFSHPY 293
+ HP+
Sbjct: 269 EALRHPW 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 19/192 (9%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++
Sbjct: 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +KL DFG A + + +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPD--------CMDFLSRLLQKDPMR 281
L G +P+ L + + L A IT + DF+ +LL K+ +
Sbjct: 210 ILLSGASPF----LGDTKQETL--ANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRK 263
Query: 282 RISYEDLFSHPY 293
R++ ++ HP+
Sbjct: 264 RLTIQEALRHPW 275
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 104/190 (54%), Gaps = 15/190 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +I E GG+L F+ E L+E + +F++Q++ + +L + HFDLKP+NI++
Sbjct: 89 VILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K+ DFG A + ++ +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP------NSLSPDCMDFLSRLLQKDPMRRI 283
L G +P+ L + + L++ ++ S DF+ RLL KDP +R+
Sbjct: 209 ILLSGASPF----LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 284 SYEDLFSHPY 293
+ +D HP+
Sbjct: 265 TIQDSLQHPW 274
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 19/192 (9%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++
Sbjct: 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +KL DFG A + + +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPD--------CMDFLSRLLQKDPMR 281
L G +P+ L + + L A IT + DF+ +LL K+ +
Sbjct: 210 ILLSGASPF----LGDTKQETL--ANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRK 263
Query: 282 RISYEDLFSHPY 293
R++ ++ HP+
Sbjct: 264 RLTIQEALRHPW 275
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 4/182 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++++E+ GG L + S +L+E Q ++ AL +L V H D+K +IL+
Sbjct: 117 LWVLMEFLQGGALTDIV-SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT 175
Query: 175 -NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL+DFGF AQ + + G+P +MAPE+++ S Y + D+WSLG++V E +
Sbjct: 176 LDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIP-PNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
G PY S + Q + S P + + +SP DFL R+L +DP R + ++L H
Sbjct: 236 DGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295
Query: 292 PY 293
P+
Sbjct: 296 PF 297
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P ++Y++++ GG+L I +E +RQ++ A+ +L + H DLKP+N+
Sbjct: 92 PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 151
Query: 172 LI----KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
L + + + ++DFG ++ D + G+P Y+APE+LA PY+ D WS+GV+
Sbjct: 152 LYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
Query: 228 VFEALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISY 285
+ L G+ P+ N S+L Q L + P + +S DF+ L++KDP +R +
Sbjct: 212 AYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTC 271
Query: 286 EDLFSHPY 293
E HP+
Sbjct: 272 EQAARHPW 279
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 19/192 (9%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
V +ILE GG+L F+ E LSE + F++Q++ + +L + HFDLKP+NI++
Sbjct: 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 175 NNT-----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ +KL DFG A + + +I G+P ++APEI+ P +AD+WS+GV+ +
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPD--------CMDFLSRLLQKDPMR 281
L G +P+ L + + L A IT + DF+ +LL K+ +
Sbjct: 210 ILLSGASPF----LGDTKQETL--ANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRK 263
Query: 282 RISYEDLFSHPY 293
R++ ++ HP+
Sbjct: 264 RLTIQEALRHPW 275
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +Y++ EY GG++ ++ +H + E + + RQ+V A+++ + + H DLK +N+L
Sbjct: 86 KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 173 IK-NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFE 230
+ + +K+ADFGF+ ++ D+ G+P Y APE+ G Y+ + D+WSLGV+++
Sbjct: 146 LDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
+ G P+ NL +LR + L P S DC + L + L +P +R + E +
Sbjct: 206 LVSGSLPFDGQNLKELRERVLRGKYRI--PFYXSTDCENLLKKFLILNPSKRGTLEQIXK 263
Query: 291 HPYPDLIH 298
+ ++ H
Sbjct: 264 DRWXNVGH 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++I++E+C GG + + + ++ L+E Q Q RQ++ AL FL + H DLK N+L+
Sbjct: 91 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM 150
Query: 174 K-NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEI-----LAGSPYNAKADLWSLGV 226
++LADFG A+ L + DS G+P +MAPE+ + +PY+ KAD+WSLG+
Sbjct: 151 TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 210
Query: 227 LVFEALFGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+ E P+ N + L A S P + P+ S + DFL L K+P R S
Sbjct: 211 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSA 270
Query: 286 EDLFSHPY 293
L HP+
Sbjct: 271 AQLLEHPF 278
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 12/186 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++++E+ +GG L + +H +++E Q ++ AL L V H D+K +IL+
Sbjct: 223 LWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 281
Query: 175 NN-TLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KL+DFGF AQ + + G+P +MAPE+++ PY + D+WSLG++V E +
Sbjct: 282 HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPP-----NSLSPDCMDFLSRLLQKDPMRRISYED 287
G PY N L+A + +PP + +SP FL RLL +DP +R + +
Sbjct: 342 DGEPPY--FNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 397
Query: 288 LFSHPY 293
L HP+
Sbjct: 398 LLKHPF 403
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 12/186 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++++E+ +GG L + +H +++E Q ++ AL L V H D+K +IL+
Sbjct: 103 LWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 161
Query: 175 NN-TLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KL+DFGF AQ + + G+P +MAPE+++ PY + D+WSLG++V E +
Sbjct: 162 HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPP-----NSLSPDCMDFLSRLLQKDPMRRISYED 287
G PY N L+A + +PP + +SP FL RLL +DP +R + +
Sbjct: 222 DGEPPY--FNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 277
Query: 288 LFSHPY 293
L HP+
Sbjct: 278 LLKHPF 283
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 12/186 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++++E+ +GG L + +H +++E Q ++ AL L V H D+K +IL+
Sbjct: 101 LWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 159
Query: 175 NN-TLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KL+DFGF AQ + + G+P +MAPE+++ PY + D+WSLG++V E +
Sbjct: 160 HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPP-----NSLSPDCMDFLSRLLQKDPMRRISYED 287
G PY N L+A + +PP + +SP FL RLL +DP +R + +
Sbjct: 220 DGEPPY--FNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 275
Query: 288 LFSHPY 293
L HP+
Sbjct: 276 LLKHPF 281
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 117 IILEYCDGGDLCSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
+I E+ GG+L + H K+SE + +++RQ+ L + ENN H DLKP+NI+
Sbjct: 125 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 184
Query: 174 -KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++N LKL DFG L P G+ + APE+ G P D+WS+GVL + L
Sbjct: 185 KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 244
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNS---LSPDCMDFLSRLLQKDPMRRISYEDLF 289
G +P+ N + + + S + ++ +S D DF+ +LL DP R++
Sbjct: 245 SGLSPFGGENDDET-LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 303
Query: 290 SHPYPDLIHAPCAES 304
HP+ +AP +S
Sbjct: 304 EHPWLTPGNAPGRDS 318
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++I++E+C GG + + + ++ L+E Q Q RQ++ AL FL + H DLK N+L+
Sbjct: 83 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM 142
Query: 174 K-NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEI-----LAGSPYNAKADLWSLGV 226
++LADFG A+ L + DS G+P +MAPE+ + +PY+ KAD+WSLG+
Sbjct: 143 TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 202
Query: 227 LVFEALFGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+ E P+ N + L A S P + P+ S + DFL L K+P R S
Sbjct: 203 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSA 262
Query: 286 EDLFSHPY 293
L HP+
Sbjct: 263 AQLLEHPF 270
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 12/186 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++++E+ +GG L + +H +++E Q ++ AL L V H D+K +IL+
Sbjct: 146 LWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 204
Query: 175 NN-TLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KL+DFGF AQ + + G+P +MAPE+++ PY + D+WSLG++V E +
Sbjct: 205 HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPP-----NSLSPDCMDFLSRLLQKDPMRRISYED 287
G PY N L+A + +PP + +SP FL RLL +DP +R + +
Sbjct: 265 DGEPPY--FNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 320
Query: 288 LFSHPY 293
L HP+
Sbjct: 321 LLKHPF 326
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 12/186 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++++E+ +GG L + +H +++E Q ++ AL L V H D+K +IL+
Sbjct: 92 LWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 150
Query: 175 NN-TLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KL+DFGF AQ + + G+P +MAPE+++ PY + D+WSLG++V E +
Sbjct: 151 HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPP-----NSLSPDCMDFLSRLLQKDPMRRISYED 287
G PY N L+A + +PP + +SP FL RLL +DP +R + +
Sbjct: 211 DGEPPY--FNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 266
Query: 288 LFSHPY 293
L HP+
Sbjct: 267 LLKHPF 272
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 12/186 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++++E+ +GG L + +H +++E Q ++ AL L V H D+K +IL+
Sbjct: 96 LWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 154
Query: 175 NN-TLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KL+DFGF AQ + + G+P +MAPE+++ PY + D+WSLG++V E +
Sbjct: 155 HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPP-----NSLSPDCMDFLSRLLQKDPMRRISYED 287
G PY N L+A + +PP + +SP FL RLL +DP +R + +
Sbjct: 215 DGEPPY--FNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 270
Query: 288 LFSHPY 293
L HP+
Sbjct: 271 LLKHPF 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 117 IILEYCDGGDLCSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
+I E+ GG+L + H K+SE + +++RQ+ L + ENN H DLKP+NI+
Sbjct: 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 290
Query: 174 -KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++N LKL DFG L P G+ + APE+ G P D+WS+GVL + L
Sbjct: 291 KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 350
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNS---LSPDCMDFLSRLLQKDPMRRISYEDLF 289
G +P+ N + + + S + ++ +S D DF+ +LL DP R++
Sbjct: 351 SGLSPFGGENDDET-LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 409
Query: 290 SHPYPDLIHAPCAESHQTAIR 310
HP+ +AP +S + R
Sbjct: 410 EHPWLTPGNAPGRDSQIPSSR 430
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 143
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + D++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 144 SAGELKIADFGWSVH-APSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 202
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 203 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G++ ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 88 VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 147
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 148 SAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 206
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 207 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 6/186 (3%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++Y+I++ GG+L I +E + + Q++ A+K+L + + H DLKP+N+L
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 174 ----KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+++ + ++DFG ++ P + G+P Y+APE+LA PY+ D WS+GV+ +
Sbjct: 150 YSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYED 287
L G+ P+ N ++L Q L + P + +S DF+ L++KDP +R + E
Sbjct: 210 ILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
Query: 288 LFSHPY 293
HP+
Sbjct: 270 ALQHPW 275
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 107/184 (58%), Gaps = 7/184 (3%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
YVY++LE C G++ ++++ K SE + + F+ Q++ + +L + + H DL N+L
Sbjct: 85 YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLL 144
Query: 173 I-KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +N +K+ADFG A Q P+++ ++ G+P Y++PEI S + ++D+WSLG + +
Sbjct: 145 LTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYT 204
Query: 231 ALFGHAPYASCNL-SQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G P+ + + + L L+ + P+ LS + D + +LL+++P R+S +
Sbjct: 205 LLIGRPPFDTDTVKNTLNKVVLADYEM---PSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261
Query: 290 SHPY 293
HP+
Sbjct: 262 DHPF 265
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G++ ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 88 VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 147
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 148 SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 206
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 207 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 6/186 (3%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++Y+I++ GG+L I +E + + Q++ A+K+L + + H DLKP+N+L
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 174 ----KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+++ + ++DFG ++ P + G+P Y+APE+LA PY+ D WS+GV+ +
Sbjct: 150 YSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYED 287
L G+ P+ N ++L Q L + P + +S DF+ L++KDP +R + E
Sbjct: 210 ILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
Query: 288 LFSHPY 293
HP+
Sbjct: 270 ALQHPW 275
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 6/186 (3%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++Y+I++ GG+L I +E + + Q++ A+K+L + + H DLKP+N+L
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 174 ----KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+++ + ++DFG ++ P + G+P Y+APE+LA PY+ D WS+GV+ +
Sbjct: 150 YSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYED 287
L G+ P+ N ++L Q L + P + +S DF+ L++KDP +R + E
Sbjct: 210 ILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
Query: 288 LFSHPY 293
HP+
Sbjct: 270 ALQHPW 275
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 6/186 (3%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++Y+I++ GG+L I +E + + Q++ A+K+L + + H DLKP+N+L
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 174 ----KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+++ + ++DFG ++ P + G+P Y+APE+LA PY+ D WS+GV+ +
Sbjct: 150 YSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYED 287
L G+ P+ N ++L Q L + P + +S DF+ L++KDP +R + E
Sbjct: 210 ILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
Query: 288 LFSHPY 293
HP+
Sbjct: 270 ALQHPW 275
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+ILEY G + R +KLS F Q+ ++ +L AL + V H D+KP+N+
Sbjct: 87 VYLILEYAPLG---TVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 143
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
L+ N LK+ADFG++ AP+ + D++ G+ Y+ PE++ G ++ K DLWSLGVL +E
Sbjct: 144 LLGSNGELKIADFGWSVH-APSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
L G P+ + + Q + +S T P+ ++ D +SRLL+ + +R++ ++
Sbjct: 203 FLVGMPPFEA-HTYQETYRRISRVEFTF-PDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
Query: 291 HPY 293
HP+
Sbjct: 261 HPW 263
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 145
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + D + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 146 SAGELKIADFGWSVH-APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 204
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 205 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 109 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 168
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + D + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 169 SAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 227
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 228 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 143
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 144 SAGELKIADFGWSCH-APSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 202
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 203 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
Y++++ GG+L I +E ++Q++ A+K+L EN + H DLKP+N+L
Sbjct: 82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLT 141
Query: 174 --KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+N+ + + DFG ++ + N + G+P Y+APE+LA PY+ D WS+GV+ +
Sbjct: 142 PEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYIL 200
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G+ P+ S+L + P + +S DF+ LL+KDP R + E
Sbjct: 201 LCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKAL 260
Query: 290 SHPYPD 295
SHP+ D
Sbjct: 261 SHPWID 266
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 101/183 (55%), Gaps = 6/183 (3%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
+ILE+ GG+L I + + K+SE + ++RQ LK + E+++ H D+KP+NI+
Sbjct: 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET 184
Query: 174 -KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
K +++K+ DFG A L P++ + + APEI+ P D+W++GVL + L
Sbjct: 185 KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL 244
Query: 233 FGHAPYA-SCNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
G +P+A +L L+ +S+SP+ DF+ LLQK+P +R++ D
Sbjct: 245 SGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304
Query: 291 HPY 293
HP+
Sbjct: 305 HPW 307
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 145
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 146 SAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 204
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 205 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 145
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 146 SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 204
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 205 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 80 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 139
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 140 SAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 198
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 199 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 100 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 159
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 160 SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 218
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 219 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 88 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 147
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 148 SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 206
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 207 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 82 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 141
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 142 SAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 200
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 201 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 87 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 146
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 147 SAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 206 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 142
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 143 SAGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 202 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 88 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 147
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE + G ++ K DLWSLGVL +E L
Sbjct: 148 SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLV 206
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 207 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 109 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 168
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 169 SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 227
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 228 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 106/193 (54%), Gaps = 12/193 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++++E+ +GG L + +H +++E Q ++ AL +L V H D+K +IL+
Sbjct: 117 LWVVMEFLEGGALTDIV-THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
Query: 175 NN-TLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KL+DFGF AQ + + G+P +MAPE+++ PY + D+WSLG++V E +
Sbjct: 176 SDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPP-----NSLSPDCMDFLSRLLQKDPMRRISYED 287
G PY ++ QA+ ++PP + +S FL +L ++P +R + ++
Sbjct: 236 DGEPPY----FNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQE 291
Query: 288 LFSHPYPDLIHAP 300
L HP+ L P
Sbjct: 292 LLGHPFLKLAGPP 304
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 145
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 146 SAGELKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 204
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 205 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 142
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 143 SAGELKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 202 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 142
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 143 SAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 202 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GGD+ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ADFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 88 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 147
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 148 SAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 206
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 207 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GGD+ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ADFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 105/183 (57%), Gaps = 10/183 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+ILEY G + R +KLS F Q+ ++ +L AL + V H D+KP+N+
Sbjct: 87 VYLILEYAPLG---TVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 143
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
L+ N LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E
Sbjct: 144 LLGSNGELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
L G P+ + + Q + +S T P+ ++ D +SRLL+ + +R++ ++
Sbjct: 203 FLVGMPPFEA-HTYQETYRRISRVEFTF-PDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
Query: 291 HPY 293
HP+
Sbjct: 261 HPW 263
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 143
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 144 SAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 202
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 203 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 142
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 143 SAGELKIADFGWSVH-APSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 202 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 142
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 143 SAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 202 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLG 142
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 143 SAGELKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 202 GKPPF-EANTYQDTYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 145
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 146 SAGELKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 204
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 205 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 142
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 143 SAGELKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 202 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 18/259 (6%)
Query: 47 VRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAP 106
VR +G + L T Q + + S++ + E R A L+N++ P
Sbjct: 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM---SSKEREESRREVAVLANMKHP 83
Query: 107 ------EGRKRPRYVYIILEYCDGGDLCSFIRSHEKL--SEFQCQQFVRQLVLALKFLRE 158
E + +YI+++YC+GGDL I + + + E Q + Q+ LALK + +
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 159 NNVCHFDLKPQNI-LIKNNTLKLADFGFAQFLAPN-DQGDSIQGSPLYMAPEILAGSPYN 216
+ H D+K QNI L K+ T++L DFG A+ L + + G+P Y++PEI PYN
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYN 203
Query: 217 AKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSL--SPDCMDFLSRL 274
K+D+W+LG +++E + + ++ L + +S + PP SL S D +S+L
Sbjct: 204 NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG---SFPPVSLHYSYDLRSLVSQL 260
Query: 275 LQKDPMRRISYEDLFSHPY 293
+++P R S + +
Sbjct: 261 FKRNPRDRPSVNSILEKGF 279
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 142
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 143 SAGELKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 202 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 85 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 144
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 145 SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 203
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 204 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 21/262 (8%)
Query: 48 RYDIV--------GSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAG 99
RYD V G + + +L + V I G V+ + I +H P
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREII-NHRSLRHPNI- 78
Query: 100 LSNLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLREN 159
+R E P ++ II+EY GG+L I + + SE + + F +QL+ + +
Sbjct: 79 ---VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM 135
Query: 160 NVCHFDLKPQNILIKNNT---LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYN 216
+CH DLK +N L+ + LK+ DFG+++ + Q S G+P Y+APE+L Y+
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYD 195
Query: 217 AK-ADLWSLGVLVFEALFGHAPYASCNLS---QLRAQALSSAPITIPPN-SLSPDCMDFL 271
K AD+WS GV ++ L G P+ + Q + S +IP + +SP+C +
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLI 255
Query: 272 SRLLQKDPMRRISYEDLFSHPY 293
SR+ DP RIS ++ +H +
Sbjct: 256 SRIFVADPATRISIPEIKTHSW 277
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y++LEY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 117 LYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ADFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 4/184 (2%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P +++++EY GG+L +I + +L E + ++ +Q++ + + + V H DLKP+N+
Sbjct: 88 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV 147
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPY-NAKADLWSLGVLVF 229
L+ + K+ADFG + ++ + GSP Y APE+++G Y + D+WS GV+++
Sbjct: 148 LLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILY 207
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G P+ ++ L + I P L+P + L +LQ DPM+R + +D+
Sbjct: 208 ALLCGTLPFDDDHVPTLFKKICDG--IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIR 265
Query: 290 SHPY 293
H +
Sbjct: 266 EHEW 269
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 145
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+A+FG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 146 SAGELKIANFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 204
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 205 GKPPF-EANTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 101/180 (56%), Gaps = 4/180 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+ILEY G + ++ K E + ++ +L AL + V H D+KP+N+L+
Sbjct: 85 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 144
Query: 175 N-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+A+FG++ AP+ + ++ G+ Y+ PE++ G ++ K DLWSLGVL +E L
Sbjct: 145 SAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 203
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
G P+ + N Q + +S T P+ ++ D +SRLL+ +P +R ++ HP+
Sbjct: 204 GKPPFEA-NTYQETYKRISRVEFTF-PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
++ ++EY +GGDL ++ KL E + + ++ LAL +L E + + DLK N+L+
Sbjct: 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 187
Query: 175 NNT-LKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL D+G + L P D + G+P Y+APEIL G Y D W+LGVL+FE +
Sbjct: 188 SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 233 FGHAPY--------ASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI- 283
G +P+ N Q + I I P SLS L L KDP R+
Sbjct: 248 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI-PRSLSVKAASVLKSFLNKDPKERLG 306
Query: 284 -----SYEDLFSHPY 293
+ D+ HP+
Sbjct: 307 CHPQTGFADIQGHPF 321
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ADFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++I++E+C GG + + + E+ L+E Q Q +Q + AL +L +N + H DLK NIL
Sbjct: 109 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF 168
Query: 174 K-NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEIL-----AGSPYNAKADLWSLGV 226
+ +KLADFG A+ + DS G+P +MAPE++ PY+ KAD+WSLG+
Sbjct: 169 TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 227 LVFEALFGHAPYASCNLSQLRAQALSSAPITIP-PNSLSPDCMDFLSRLLQKDPMRRISY 285
+ E P+ N ++ + S P T+ P+ S + DFL + L+K+ R +
Sbjct: 229 TLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT 288
Query: 286 EDLFSHPY 293
L HP+
Sbjct: 289 SQLLQHPF 296
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 19/261 (7%)
Query: 48 RYDIV---GSSTIRYGELQYDTVQNSQIRLGTV----KYSQVRYDTITSHSEFERPRAGL 100
RY++V GS L D N + + + K + I +H P
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI-- 76
Query: 101 SNLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN 160
+R E P ++ I++EY GG+L I + + SE + + F +QL+ + +
Sbjct: 77 --VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 161 VCHFDLKPQNILIKNNT---LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA 217
VCH DLK +N L+ + LK+ DFG+++ + Q S G+P Y+APE+L Y+
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 194
Query: 218 K-ADLWSLGVLVFEALFGHAPYAS----CNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
K AD+WS GV ++ L G P+ N + + L+ +SP+C +S
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 254
Query: 273 RLLQKDPMRRISYEDLFSHPY 293
R+ DP +RIS ++ +H +
Sbjct: 255 RIFVADPAKRISIPEIRNHEW 275
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++I++E+C GG + + + E+ L+E Q Q +Q + AL +L +N + H DLK NIL
Sbjct: 109 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF 168
Query: 174 K-NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEIL-----AGSPYNAKADLWSLGV 226
+ +KLADFG A+ + DS G+P +MAPE++ PY+ KAD+WSLG+
Sbjct: 169 TLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 227 LVFEALFGHAPYASCNLSQLRAQALSSAPITIP-PNSLSPDCMDFLSRLLQKDPMRRISY 285
+ E P+ N ++ + S P T+ P+ S + DFL + L+K+ R +
Sbjct: 229 TLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT 288
Query: 286 EDLFSHPY 293
L HP+
Sbjct: 289 SQLLQHPF 296
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 11/184 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
++ ++EY +GGDL I+S K + + +++L L+FL + + DLK NIL+
Sbjct: 93 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 152
Query: 174 KNNTLKLADFGFAQFLAPNDQGDS----IQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
K+ +K+ADFG + N GD+ G+P Y+APEIL G YN D WS GVL++
Sbjct: 153 KDGHIKIADFGMCK---ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 209
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYE-DL 288
E L G +P+ + +L P P L + D L +L ++P +R+ D+
Sbjct: 210 EMLIGQSPFHGQDEEELFHSIRMDNPFY--PRWLEKEAKDLLVKLFVREPEKRLGVRGDI 267
Query: 289 FSHP 292
HP
Sbjct: 268 RQHP 271
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 11/184 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
++ ++EY +GGDL I+S K + + +++L L+FL + + DLK NIL+
Sbjct: 94 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 153
Query: 174 KNNTLKLADFGFAQFLAPNDQGDS----IQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
K+ +K+ADFG + N GD+ G+P Y+APEIL G YN D WS GVL++
Sbjct: 154 KDGHIKIADFGMCK---ENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 210
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYE-DL 288
E L G +P+ + +L P P L + D L +L ++P +R+ D+
Sbjct: 211 EMLIGQSPFHGQDEEELFHSIRMDNPFY--PRWLEKEAKDLLVKLFVREPEKRLGVRGDI 268
Query: 289 FSHP 292
HP
Sbjct: 269 RQHP 272
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
++ ++ G DL +FI H +L E RQLV A+ +LR ++ H D+K +NI+I +
Sbjct: 107 VMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED 166
Query: 177 -TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFEALFG 234
T+KL DFG A +L + G+ Y APE+L G+PY + ++WSLGV ++ +F
Sbjct: 167 FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE 226
Query: 235 HAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
P+ C L + A+ PP +S + M +S LLQ P RR + E L + P+
Sbjct: 227 ENPF--CELEETVEAAIH------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
++ ++EY +GGDL ++ KL E + + ++ LAL +L E + + DLK N+L+
Sbjct: 81 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 140
Query: 175 NNT-LKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL D+G + L P D G+P Y+APEIL G Y D W+LGVL+FE +
Sbjct: 141 SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
Query: 233 FGHAPY--------ASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI- 283
G +P+ N Q + I I P SLS L L KDP R+
Sbjct: 201 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI-PRSLSVKAASVLKSFLNKDPKERLG 259
Query: 284 -----SYEDLFSHPY 293
+ D+ HP+
Sbjct: 260 CHPQTGFADIQGHPF 274
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 27/265 (10%)
Query: 48 RYDIV---GSSTIRYGELQYDTVQNSQIRLGTVKY--------SQVRYDTITSHSEFERP 96
RY++V GS L D N L VKY + V+ + I +H P
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSN---ELVAVKYIERGEKIAANVKREII-NHRSLRHP 75
Query: 97 RAGLSNLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFL 156
+R E P ++ I++EY GG+L I + + SE + + F +QL+ + +
Sbjct: 76 NI----VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 157 RENNVCHFDLKPQNILIKNNT---LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
VCH DLK +N L+ + LK+ DFG+++ + Q S G+P Y+APE+L
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASC----NLSQLRAQALSSAPITIPPNSLSPDCM 268
Y+ K AD+WS GV ++ L G P+ N + + L+ +SP+C
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 269 DFLSRLLQKDPMRRISYEDLFSHPY 293
+SR+ DP +RIS ++ +H +
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEW 276
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
++ ++EY +GGDL ++ KL E + + ++ LAL +L E + + DLK N+L+
Sbjct: 85 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 144
Query: 175 NNT-LKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL D+G + L P D G+P Y+APEIL G Y D W+LGVL+FE +
Sbjct: 145 SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 233 FGHAPY--------ASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI- 283
G +P+ N Q + I I P SLS L L KDP R+
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI-PRSLSVKAASVLKSFLNKDPKERLG 263
Query: 284 -----SYEDLFSHPY 293
+ D+ HP+
Sbjct: 264 CHPQTGFADIQGHPF 278
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
++ ++EY +GGDL ++ KL E + + ++ LAL +L E + + DLK N+L+
Sbjct: 96 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 155
Query: 175 NNT-LKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL D+G + L P D G+P Y+APEIL G Y D W+LGVL+FE +
Sbjct: 156 SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 215
Query: 233 FGHAPY--------ASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI- 283
G +P+ N Q + I I P S+S L L KDP R+
Sbjct: 216 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI-PRSMSVKAASVLKSFLNKDPKERLG 274
Query: 284 -----SYEDLFSHPY 293
+ D+ HP+
Sbjct: 275 CLPQTGFADIQGHPF 289
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 104/186 (55%), Gaps = 7/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
RKR +Y++LE+ G+L ++ H + E + F+ +L AL + E V H D+KP
Sbjct: 86 RKR---IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 142
Query: 169 QNILIK-NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
+N+L+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLW GVL
Sbjct: 143 ENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 201
Query: 228 VFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED 287
+E L G P+ S + ++ + + + + PP LS D +S+LL+ P +R+ +
Sbjct: 202 CYEFLVGMPPFDSPSHTETH-RRIVNVDLKFPP-FLSDGSKDLISKLLRYHPPQRLPLKG 259
Query: 288 LFSHPY 293
+ HP+
Sbjct: 260 VMEHPW 265
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++I++E+C GG + + + E+ L+E Q Q +Q + AL +L +N + H DLK NIL
Sbjct: 82 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF 141
Query: 174 K-NNTLKLADFGFAQFLAPNDQG-----DSIQGSPLYMAPEIL-----AGSPYNAKADLW 222
+ +KLADFG + A N + DS G+P +MAPE++ PY+ KAD+W
Sbjct: 142 TLDGDIKLADFGVS---AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 198
Query: 223 SLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIP-PNSLSPDCMDFLSRLLQKDPMR 281
SLG+ + E P+ N ++ + S P T+ P+ S + DFL + L+K+
Sbjct: 199 SLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDA 258
Query: 282 RISYEDLFSHPY 293
R + L HP+
Sbjct: 259 RWTTSQLLQHPF 270
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 104/186 (55%), Gaps = 7/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
RKR +Y++LE+ G+L ++ H + E + F+ +L AL + E V H D+KP
Sbjct: 86 RKR---IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 142
Query: 169 QNILIK-NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
+N+L+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLW GVL
Sbjct: 143 ENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 201
Query: 228 VFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED 287
+E L G P+ S + ++ + + + + PP LS D +S+LL+ P +R+ +
Sbjct: 202 CYEFLVGMPPFDSPSHTETH-RRIVNVDLKFPP-FLSDGSKDLISKLLRYHPPQRLPLKG 259
Query: 288 LFSHPY 293
+ HP+
Sbjct: 260 VMEHPW 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 104/186 (55%), Gaps = 7/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
RKR +Y++LE+ G+L ++ H + E + F+ +L AL + E V H D+KP
Sbjct: 87 RKR---IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 143
Query: 169 QNILIK-NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
+N+L+ LK+ADFG++ AP+ + + G+ Y+ PE++ G ++ K DLW GVL
Sbjct: 144 ENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 202
Query: 228 VFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED 287
+E L G P+ S + ++ + + + + PP LS D +S+LL+ P +R+ +
Sbjct: 203 CYEFLVGMPPFDSPSHTETH-RRIVNVDLKFPP-FLSDGSKDLISKLLRYHPPQRLPLKG 260
Query: 288 LFSHPY 293
+ HP+
Sbjct: 261 VMEHPW 266
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 15/191 (7%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ Y++ + GG+L I + E SE ++Q++ ++ N + H DLKP+N+L+
Sbjct: 77 FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLL 136
Query: 174 ----KNNTLKLADFGFAQFLAPNDQGD-----SIQGSPLYMAPEILAGSPYNAKADLWSL 224
K +KLADFG LA QGD G+P Y++PE+L PY D+W+
Sbjct: 137 ASKSKGAAVKLADFG----LAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWAC 192
Query: 225 GVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRR 282
GV+++ L G+ P+ + +L Q + A P ++++P+ D ++++L +P +R
Sbjct: 193 GVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKR 252
Query: 283 ISYEDLFSHPY 293
I+ + HP+
Sbjct: 253 ITASEALKHPW 263
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++I++E+C GG + + + E+ L+E Q Q +Q + AL +L +N + H DLK NIL
Sbjct: 109 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF 168
Query: 174 K-NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEIL-----AGSPYNAKADLWSLGV 226
+ +KLADFG A+ + D G+P +MAPE++ PY+ KAD+WSLG+
Sbjct: 169 TLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 227 LVFEALFGHAPYASCNLSQLRAQALSSAPITIP-PNSLSPDCMDFLSRLLQKDPMRRISY 285
+ E P+ N ++ + S P T+ P+ S + DFL + L+K+ R +
Sbjct: 229 TLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT 288
Query: 286 EDLFSHPY 293
L HP+
Sbjct: 289 SQLLQHPF 296
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P ++++EY GG+L +I H ++ E + ++ +Q++ A+ + + V H DLKP+N+
Sbjct: 83 PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENV 142
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVF 229
L+ + K+ADFG + ++ + + GSP Y APE+++G Y + D+WS GV+++
Sbjct: 143 LLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILY 202
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G P+ ++ L + + P L+ L +LQ DP++R + +D+
Sbjct: 203 ALLCGTLPFDDEHVPTLFKKI--RGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIR 260
Query: 290 SHPY 293
H +
Sbjct: 261 EHEW 264
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + ++ G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW--TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 102 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 161
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + ++ G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 162 QQGYIQVTDFGFAKRVKGRTW--TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 219
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 220 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 268
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 15/191 (7%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ Y++ + GG+L I + E SE ++Q++ ++ N + H DLKP+N+L+
Sbjct: 77 FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLL 136
Query: 174 ----KNNTLKLADFGFAQFLAPNDQGD-----SIQGSPLYMAPEILAGSPYNAKADLWSL 224
K +KLADFG LA QGD G+P Y++PE+L PY D+W+
Sbjct: 137 ASKSKGAAVKLADFG----LAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWAC 192
Query: 225 GVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRR 282
GV+++ L G+ P+ + +L Q + A P ++++P+ D ++++L +P +R
Sbjct: 193 GVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKR 252
Query: 283 ISYEDLFSHPY 293
I+ + HP+
Sbjct: 253 ITASEALKHPW 263
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 106/180 (58%), Gaps = 13/180 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++IL+Y +GG+L + + E+ +E + Q +V ++VLAL+ L + + + D+K +NIL+
Sbjct: 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD 193
Query: 175 NNT-LKLADFGFA-QFLA-PNDQGDSIQGSPLYMAPEILAG--SPYNAKADLWSLGVLVF 229
+N + L DFG + +F+A ++ G+ YMAP+I+ G S ++ D WSLGVL++
Sbjct: 194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMY 253
Query: 230 EALFGHAPYA----SCNLSQLRAQALSSAPITIP-PNSLSPDCMDFLSRLLQKDPMRRIS 284
E L G +P+ + +++ + L S P P P +S D + RLL KDP +R+
Sbjct: 254 ELLTGASPFTVDGEKNSQAEISRRILKSEP---PYPQEMSALAKDLIQRLLMKDPKKRLG 310
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV----RQLVLALKFLRE-----NNVCHFD 165
+YI++EYC+GGDL S I K ++ ++FV QL LALK + V H D
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 166 LKPQNILIK-NNTLKLADFGFAQFLAPN-DQGDSIQGSPLYMAPEILAGSPYNAKADLWS 223
LKP N+ + +KL DFG A+ L + D G+P YM+PE + YN K+D+WS
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
LG L++E P+ + + +L A + P S + + ++R+L R
Sbjct: 202 LGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRP 260
Query: 284 SYEDLFSHP 292
S E++ +P
Sbjct: 261 SVEEILENP 269
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 137 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + ++ G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 197 QQGYIQVTDFGFAKRVKGATW--TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 255 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 303
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
Y+I + GG+L I + E SE ++Q++ A+ + V H DLKP+N+L+
Sbjct: 97 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLAS 156
Query: 174 --KNNTLKLADFGFAQFLAPNDQGD-SIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
K +KLADFG A + Q G+P Y++PE+L PY DLW+ GV+++
Sbjct: 157 KLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G+ P+ + +L Q + A P ++++P+ D ++++L +P +RI+ +
Sbjct: 217 LLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEA 276
Query: 289 FSHPY 293
HP+
Sbjct: 277 LKHPW 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 137 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 197 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 255 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 303
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 117 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADEPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P ++++EY GG+L +I H ++ E + ++ +Q++ A+ + + V H DLKP+N+
Sbjct: 83 PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENV 142
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVF 229
L+ + K+ADFG + ++ + GSP Y APE+++G Y + D+WS GV+++
Sbjct: 143 LLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILY 202
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G P+ ++ L + + P L+ L +LQ DP++R + +D+
Sbjct: 203 ALLCGTLPFDDEHVPTLFKKI--RGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIR 260
Query: 290 SHPY 293
H +
Sbjct: 261 EHEW 264
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 103 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 162
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 163 EQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 220
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 221 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 269
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 94/170 (55%), Gaps = 5/170 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 168
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 227 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRF 274
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV----RQLVLALKFLRE-----NNVCHFD 165
+YI++EYC+GGDL S I K ++ ++FV QL LALK + V H D
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 166 LKPQNILIK-NNTLKLADFGFAQFLAPNDQ-GDSIQGSPLYMAPEILAGSPYNAKADLWS 223
LKP N+ + +KL DFG A+ L + + G+P YM+PE + YN K+D+WS
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
LG L++E P+ + + +L A + P S + + ++R+L R
Sbjct: 202 LGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRP 260
Query: 284 SYEDLFSHP 292
S E++ +P
Sbjct: 261 SVEEILENP 269
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
+I E+ G D+ I + +L+E + +V Q+ AL+FL +N+ HFD++P+NI+
Sbjct: 78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT 137
Query: 174 -KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+++T+K+ +FG A+ L P D + +P Y APE+ + D+WSLG LV+ L
Sbjct: 138 RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL 197
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNS---LSPDCMDFLSRLLQKDPMRRISYEDLF 289
G P+ + Q+ + + +A T + +S + MDF+ RLL K+ R++ +
Sbjct: 198 SGINPFLAETNQQI-IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEAL 256
Query: 290 SHPY 293
HP+
Sbjct: 257 QHPW 260
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV----RQLVLALKFLRE-----NNVCHFD 165
+YI++EYC+GGDL S I K ++ ++FV QL LALK + V H D
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 166 LKPQNILIKNN-TLKLADFGFAQFLAPNDQ-GDSIQGSPLYMAPEILAGSPYNAKADLWS 223
LKP N+ + +KL DFG A+ L + + G+P YM+PE + YN K+D+WS
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
LG L++E P+ + + +L A + P S + + ++R+L R
Sbjct: 202 LGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRP 260
Query: 284 SYEDLFSHP 292
S E++ +P
Sbjct: 261 SVEEILENP 269
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 8/190 (4%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P ++ I++EY GG+L I + + SE + + F +QL+ + + V H DLK +N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENT 146
Query: 172 LIKNNT---LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLGVL 227
L+ + LK+ADFG+++ + Q S G+P Y+APE+L Y+ K AD+WS GV
Sbjct: 147 LLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 228 VFEALFGHAPYAS----CNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
++ L G P+ N + + L+ +SP+C +SR+ DP +RI
Sbjct: 207 LYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI 266
Query: 284 SYEDLFSHPY 293
S ++ +H +
Sbjct: 267 SIPEIRNHEW 276
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 19/261 (7%)
Query: 48 RYDIV---GSSTIRYGELQYDTVQNSQIRLGTV----KYSQVRYDTITSHSEFERPRAGL 100
RY++V GS L D N + + + K + I +H P
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI-- 77
Query: 101 SNLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN 160
+R E P ++ I++EY GG+L I + + SE + + F +QL+ + +
Sbjct: 78 --VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 161 VCHFDLKPQNILIKNNT---LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA 217
VCH DLK +N L+ + LK+ FG+++ + Q S G+P Y+APE+L Y+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 218 K-ADLWSLGVLVFEALFGHAPYASC----NLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
K AD+WS GV ++ L G P+ N + + L+ +SP+C +S
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 273 RLLQKDPMRRISYEDLFSHPY 293
R+ DP +RIS ++ +H +
Sbjct: 256 RIFVADPAKRISIPEIRNHEW 276
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
Y+I + GG+L I + E SE ++Q++ A+ + V H +LKP+N+L+
Sbjct: 86 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLAS 145
Query: 174 --KNNTLKLADFGFAQFLAPNDQGD-SIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
K +KLADFG A + Q G+P Y++PE+L PY DLW+ GV+++
Sbjct: 146 KLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 205
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G+ P+ + +L Q + A P ++++P+ D ++++L +P +RI+ +
Sbjct: 206 LLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEA 265
Query: 289 FSHPY 293
HP+
Sbjct: 266 LKHPW 270
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
Y++ + GG+L I + E SE + Q++ ++ + ++++ H DLKP+N+L+
Sbjct: 106 YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLAS 165
Query: 174 --KNNTLKLADFGFAQFLAPNDQGD-SIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
K +KLADFG A + Q G+P Y++PE+L PY D+W+ GV+++
Sbjct: 166 KCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYI 225
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G+ P+ + +L Q + A P ++++P+ + ++++L +P +RI+ +
Sbjct: 226 LLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQA 285
Query: 289 FSHPYPDLIHAPCAESHQTAIRIVTDAIHHDRENNSRRAFS 329
HP+ C S ++ + + R+ N+RR
Sbjct: 286 LKHPW------VCQRSTVASMMHRQETVECLRKFNARRKLK 320
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + +E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 21/197 (10%)
Query: 113 RYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 170
R + II+E +GG+L S I R + +E + + +R + A++FL +N+ H D+KP+N
Sbjct: 80 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 139
Query: 171 ILI----KNNTLKLADFGFAQFLAPNDQGDSIQG---SPLYMAPEILAGSPYNAKADLWS 223
+L K+ LKL DFGFA+ N ++Q +P Y+APE+L Y+ D+WS
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 224 LGVLVFEALFGHAPYASCNLSQL------RAQALSSAPITIPPNS-LSPDCMDFLSRLLQ 276
LGV+++ L G P+ S N Q R L P S +S D + LL+
Sbjct: 196 LGVIMYILLCGFPPFYS-NTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLK 254
Query: 277 KDPMRRISYEDLFSHPY 293
DP R++ +HP+
Sbjct: 255 TDPTERLTITQFMNHPW 271
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 21/197 (10%)
Query: 113 RYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 170
R + II+E +GG+L S I R + +E + + +R + A++FL +N+ H D+KP+N
Sbjct: 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 171 ILI----KNNTLKLADFGFAQFLAPNDQGDSIQG---SPLYMAPEILAGSPYNAKADLWS 223
+L K+ LKL DFGFA+ N ++Q +P Y+APE+L Y+ D+WS
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 224 LGVLVFEALFGHAPYASCNLSQL------RAQALSSAPITIPPNS-LSPDCMDFLSRLLQ 276
LGV+++ L G P+ S N Q R L P S +S D + LL+
Sbjct: 215 LGVIMYILLCGFPPFYS-NTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLK 273
Query: 277 KDPMRRISYEDLFSHPY 293
DP R++ +HP+
Sbjct: 274 TDPTERLTITQFMNHPW 290
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKL----SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 170
+Y++ E+ DG DLC I SE ++RQ++ AL++ +NN+ H D+KP+N
Sbjct: 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPEN 160
Query: 171 ILI--KNNT--LKLADFGFAQFLAPND--QGDSIQGSPLYMAPEILAGSPYNAKADLWSL 224
+L+ K N+ +KL DFG A L + G + G+P +MAPE++ PY D+W
Sbjct: 161 VLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKREPYGKPVDVWGC 219
Query: 225 GVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKDPMR 281
GV++F L G P+ + + + + P + +S D + R+L DP
Sbjct: 220 GVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAE 277
Query: 282 RISYEDLFSHPYPDLIHAPCAESHQTAIRI-VTDAIHHDRENNSRR 326
RI+ + +HP+ E + A +I + + + R+ N+RR
Sbjct: 278 RITVYEALNHPW-------LKERDRYAYKIHLPETVEQLRKFNARR 316
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
YI+ E GG+L I ++ SE + ++Q+ + ++ ++N+ H DLKP+NIL+
Sbjct: 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156
Query: 174 --KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
K+ +K+ DFG + N + G+ Y+APE+L G+ Y+ K D+WS GV+++
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYIL 215
Query: 232 LFGHAP-YASCNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G P Y L+ +P ++S D D + ++L P RI+
Sbjct: 216 LSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275
Query: 290 SHPY--------PDLIHAPCAESHQTAIR 310
HP+ P + P ES T IR
Sbjct: 276 EHPWIQKYSSETPTISDLPSLESAMTNIR 304
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL+++
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFG A+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIKVTDFGLAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 137 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 197 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 255 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 303
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 111 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 170
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 171 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 228
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 229 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 277
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 235 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 18/192 (9%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ +ILEY GG++ S E +SE + ++Q++ + +L +NN+ H DLKPQNIL
Sbjct: 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNIL 163
Query: 173 IKN----NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLV 228
+ + +K+ DFG ++ + + I G+P Y+APEIL P D+W++G++
Sbjct: 164 LSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223
Query: 229 FEALFGHAPYAS-------CNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMR 281
+ L +P+ N+SQ+ +S+S DF+ LL K+P +
Sbjct: 224 YMLLTHTSPFVGEDNQETYLNISQVNVDYSEET-----FSSVSQLATDFIQSLLVKNPEK 278
Query: 282 RISYEDLFSHPY 293
R + E SH +
Sbjct: 279 RPTAEICLSHSW 290
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ Y++ + GG+L I + E SE ++Q++ ++ + N + H +LKP+N+L+
Sbjct: 102 FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLL 161
Query: 174 ----KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
K +KLADFG A + ++ G+P Y++PE+L PY+ D+W+ GV+++
Sbjct: 162 ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 221
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYED 287
L G+ P+ + +L AQ + A P ++++P+ + +L +P +RI+ +
Sbjct: 222 ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ 281
Query: 288 LFSHPY 293
P+
Sbjct: 282 ALKVPW 287
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 168
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 227 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 275
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 12/187 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++I++EYC G + IR K L+E + ++ + L++L H D+K NIL+
Sbjct: 99 LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL 158
Query: 174 KNNT-LKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
KLADFG A Q + + + G+P +MAPE++ YN AD+WSLG+ E
Sbjct: 159 NTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM 218
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-----DFLSRLLQKDPMRRISYE 286
G PYA ++ +R A+ P PP P+ DF+ + L K P +R +
Sbjct: 219 AEGKPPYA--DIHPMR--AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATAT 274
Query: 287 DLFSHPY 293
L HP+
Sbjct: 275 QLLQHPF 281
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + E + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 5/165 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKD 278
G+ P+ + Q+ + +S P+ S D D L LLQ D
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVD 276
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
Y Y++ E GG+L I S ++ SE + +RQ++ + ++ +N + H DLKP+N+L+
Sbjct: 106 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 165
Query: 174 ----KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLV 228
K+ +++ DFG + F A D I G+ Y+APE+L G+ Y+ K D+WS GV++
Sbjct: 166 ESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 223
Query: 229 FEALFGHAPYASCN-LSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYE 286
+ L G P+ N L+ +P +S D + ++L P RIS
Sbjct: 224 YILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISAR 283
Query: 287 DLFSHPY 293
D H +
Sbjct: 284 DALDHEW 290
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 48 RYDIV---GSSTIRYGELQYDTVQNSQIRLGTV----KYSQVRYDTITSHSEFERPRAGL 100
RY++V GS L D N + + + K + I +H P
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI-- 77
Query: 101 SNLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN 160
+R E P ++ I++EY GG+L I + + SE + + F +QL+ + +
Sbjct: 78 --VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 161 VCHFDLKPQNILIKNNT---LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA 217
VCH DLK +N L+ + LK+ FG+++ + Q G+P Y+APE+L Y+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDG 195
Query: 218 K-ADLWSLGVLVFEALFGHAPYASC----NLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
K AD+WS GV ++ L G P+ N + + L+ +SP+C +S
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 273 RLLQKDPMRRISYEDLFSHPY 293
R+ DP +RIS ++ +H +
Sbjct: 256 RIFVADPAKRISIPEIRNHEW 276
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 14/224 (6%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
R Y+++E GG+L I K +E ++Q++ + +L ++N+ H DLKP+N+
Sbjct: 108 KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENL 167
Query: 172 LI----KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
L+ K+ +K+ DFG + + G+ Y+APE+L Y+ K D+WS+GV+
Sbjct: 168 LLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVI 226
Query: 228 VFEALFGHAPYAS-CNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISY 285
+F L G+ P+ + LR P ++S D + ++LQ D RRIS
Sbjct: 227 LFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISA 286
Query: 286 EDLFSHPYPDLIHAPCAESHQTAIRI--VTDAIHHDRE-NNSRR 326
+ HP+ I C++ ++ I + + +AI + R+ NS++
Sbjct: 287 QQALEHPW---IKEMCSKK-ESGIELPSLANAIENMRKFQNSQK 326
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
Y Y++ E GG+L I S ++ SE + +RQ++ + ++ +N + H DLKP+N+L+
Sbjct: 124 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 183
Query: 174 ----KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLV 228
K+ +++ DFG + F A D I G+ Y+APE+L G+ Y+ K D+WS GV++
Sbjct: 184 ESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 241
Query: 229 FEALFGHAPYASCN-LSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYE 286
+ L G P+ N L+ +P +S D + ++L P RIS
Sbjct: 242 YILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISAR 301
Query: 287 DLFSHPY 293
D H +
Sbjct: 302 DALDHEW 308
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
Y++ + GG+L I + E SE ++Q++ ++ + N + H +LKP+N+L+
Sbjct: 80 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 139
Query: 174 --KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
K +KLADFG A + ++ G+P Y++PE+L PY+ D+W+ GV+++
Sbjct: 140 KAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 199
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G+ P+ + +L AQ + A P ++++P+ + +L +P +RI+ +
Sbjct: 200 LVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 259
Query: 290 SHPY 293
P+
Sbjct: 260 KVPW 263
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
Y Y++ E GG+L I S ++ SE + +RQ++ + ++ +N + H DLKP+N+L+
Sbjct: 123 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 182
Query: 174 ----KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLV 228
K+ +++ DFG + F A D I G+ Y+APE+L G+ Y+ K D+WS GV++
Sbjct: 183 ESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 240
Query: 229 FEALFGHAPYASCN-LSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYE 286
+ L G P+ N L+ +P +S D + ++L P RIS
Sbjct: 241 YILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISAR 300
Query: 287 DLFSHPY 293
D H +
Sbjct: 301 DALDHEW 307
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
Y++ + GG+L I + E SE ++Q++ ++ + N + H +LKP+N+L+
Sbjct: 81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 140
Query: 174 --KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
K +KLADFG A + ++ G+P Y++PE+L PY+ D+W+ GV+++
Sbjct: 141 KAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 200
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G+ P+ + +L AQ + A P ++++P+ + +L +P +RI+ +
Sbjct: 201 LVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
Query: 290 SHPY 293
P+
Sbjct: 261 KVPW 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
Y++ + GG+L I + E SE ++Q++ ++ + N + H +LKP+N+L+
Sbjct: 81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 140
Query: 174 --KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
K +KLADFG A + ++ G+P Y++PE+L PY+ D+W+ GV+++
Sbjct: 141 KAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 200
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G+ P+ + +L AQ + A P ++++P+ + +L +P +RI+ +
Sbjct: 201 LVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
Query: 290 SHPY 293
P+
Sbjct: 261 KVPW 264
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P Y+AP I+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
Y Y++ E GG+L I S ++ SE + +RQ++ + ++ +N + H DLKP+N+L+
Sbjct: 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 159
Query: 174 ----KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLV 228
K+ +++ DFG + F A D I G+ Y+APE+L G+ Y+ K D+WS GV++
Sbjct: 160 ESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
Query: 229 FEALFGHAPYASCN-LSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYE 286
+ L G P+ N L+ +P +S D + ++L P RIS
Sbjct: 218 YILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISAR 277
Query: 287 DLFSHPY 293
D H +
Sbjct: 278 DALDHEW 284
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 7/189 (3%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P + ++LE GG+L I SE V+Q++ A+ +L EN + H DLKP+N+
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENL 179
Query: 172 LIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
L + LK+ADFG ++ + ++ G+P Y APEIL G Y + D+WS+G++
Sbjct: 180 LYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239
Query: 228 VFEALFGHAPYASCNLSQ-LRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRIS 284
+ L G P+ Q + + L+ I P + +S + D + +L+ DP +R++
Sbjct: 240 TYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLT 299
Query: 285 YEDLFSHPY 293
HP+
Sbjct: 300 TFQALQHPW 308
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N++I
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFG A+ + + G+P Y+APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGLAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+++EY GG++ S +R + SE + + Q+VL ++L ++ + DLKP+N+LI
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +++ DFGFA+ + + G+P +APEI+ YN D W+LGVL++E
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTW--XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G+ P+ + Q+ + +S P+ S D D L LLQ D +R
Sbjct: 234 GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 10/184 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
++II+EY GG +R+ EFQ +++++ L +L H D+K N+L+
Sbjct: 96 LWIIMEYLGGGSALDLLRAGP-FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS 154
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KLADFG A Q + ++ G+P +MAPE++ S Y++KAD+WSLG+ E
Sbjct: 155 EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELA 214
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISYEDLF 289
G P + ++ +R L P PP + +F+ L KDP R + ++L
Sbjct: 215 KGEPP--NSDMHPMRVLFL--IPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELL 270
Query: 290 SHPY 293
H +
Sbjct: 271 KHKF 274
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 103/190 (54%), Gaps = 8/190 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y +L+Y +GG+L ++ E + + + ++ AL +L N+ + DLKP+NIL+
Sbjct: 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD 173
Query: 175 NNT-LKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ + L DFG + + N + G+P Y+APE+L PY+ D W LG +++E L
Sbjct: 174 SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF--- 289
+G P+ S N +++ L+ P+ + PN ++ L LLQKD +R+ +D F
Sbjct: 234 YGLPPFYSRNTAEMYDNILNK-PLQLKPN-ITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291
Query: 290 -SHPYPDLIH 298
SH + LI+
Sbjct: 292 KSHVFFSLIN 301
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 9/189 (4%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +++ + G+L ++ LSE + ++ +R L+ + L + N+ H DLKP+NIL+
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157
Query: 174 KNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS------PYNAKADLWSLGV 226
++ +KL DFGF+ L P ++ S+ G+P Y+APEI+ S Y + D+WS GV
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 227 LVFEALFGHAPYAS-CNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRIS 284
+++ L G P+ + LR + P + S D +SR L P +R +
Sbjct: 218 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT 277
Query: 285 YEDLFSHPY 293
E+ +HP+
Sbjct: 278 AEEALAHPF 286
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 10/200 (5%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
R Y+++E GG+L I +K SE ++Q++ +L ++N+ H DLKP+N+
Sbjct: 76 KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENL 135
Query: 172 LIKNNT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
L+++ + +K+ DFG + + G+ Y+APE+L Y+ K D+WS GV+
Sbjct: 136 LLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVI 194
Query: 228 VFEALFGHAPYASCNLSQLRAQALSSAPITIPPN--SLSPDCMDFLSRLLQKDPMRRISY 285
++ L G+ P+ ++ + PP+ +S + + +L +P +RIS
Sbjct: 195 LYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISA 254
Query: 286 EDLFSHPYPDLIHAPCAESH 305
E+ +HP+ I C++ H
Sbjct: 255 EEALNHPW---IVKFCSQKH 271
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 7/184 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
YI+ E GG+L I ++ SE + ++Q+ + ++ ++N+ H DLKP+NIL+
Sbjct: 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156
Query: 174 --KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
K+ +K+ DFG + N + G+ Y+APE+L G+ Y+ K D+WS GV+++
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYIL 215
Query: 232 LFGHAP-YASCNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G P Y L+ +P ++S D D + ++L P RI+
Sbjct: 216 LSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275
Query: 290 SHPY 293
HP+
Sbjct: 276 EHPW 279
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 7/184 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
YI+ E GG+L I ++ SE + ++Q+ + ++ ++N+ H DLKP+NIL+
Sbjct: 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156
Query: 174 --KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
K+ +K+ DFG + N + G+ Y+APE+L G+ Y+ K D+WS GV+++
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYIL 215
Query: 232 LFGHAP-YASCNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
L G P Y L+ +P ++S D D + ++L P RI+
Sbjct: 216 LSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275
Query: 290 SHPY 293
HP+
Sbjct: 276 EHPW 279
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y+Y+++E C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N L
Sbjct: 82 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 140
Query: 173 IKNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEI---LAGSPYNA--------K 218
I + LKL DFG A + P+ DS G+ YM PE ++ S N K
Sbjct: 141 IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 200
Query: 219 ADLWSLGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQ 276
+D+WSLG +++ +G P+ +S+L A + I P+ D D L L+
Sbjct: 201 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLK 259
Query: 277 KDPMRRISYEDLFSHPYPDLIHAPCAE 303
+DP +RIS +L +HPY + P +
Sbjct: 260 RDPKQRISIPELLAHPYVQIQTHPVNQ 286
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
Y++ + GG+L I + E SE ++Q++ A+ + V H DLKP+N+L+
Sbjct: 79 YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLAS 138
Query: 174 --KNNTLKLADFGFAQFLAPNDQGD-----SIQGSPLYMAPEILAGSPYNAKADLWSLGV 226
K +KLADFG LA QGD G+P Y++PE+L Y D+W+ GV
Sbjct: 139 KCKGAAVKLADFG----LAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGV 194
Query: 227 LVFEALFGHAPYASCNLSQLRAQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRRIS 284
+++ L G+ P+ + +L Q + A P ++++P+ + ++++L +P +RI+
Sbjct: 195 ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIT 254
Query: 285 YEDLFSHPY 293
+ HP+
Sbjct: 255 AHEALKHPW 263
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y+Y+++E C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N L
Sbjct: 129 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 187
Query: 173 IKNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEI---LAGSPYNA--------K 218
I + LKL DFG A + P+ DS G+ YM PE ++ S N K
Sbjct: 188 IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 219 ADLWSLGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQ 276
+D+WSLG +++ +G P+ +S+L A + I P+ D D L L+
Sbjct: 248 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLK 306
Query: 277 KDPMRRISYEDLFSHPY 293
+DP +RIS +L +HPY
Sbjct: 307 RDPKQRISIPELLAHPY 323
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
++II+EY GG + L E Q +R+++ L +L H D+K N+L+
Sbjct: 80 LWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 138
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KLADFG A Q + ++ G+P +MAPE++ S Y++KAD+WSLG+ E
Sbjct: 139 EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 198
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHP 292
G P++ + ++ + P T+ N P +F+ L K+P R + ++L H
Sbjct: 199 RGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPTAKELLKHK 257
Query: 293 Y 293
+
Sbjct: 258 F 258
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 125/250 (50%), Gaps = 13/250 (5%)
Query: 52 VGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAP----- 106
+G + +L Y T ++ L + + + ER + L LR P
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM--QGRIEREISYLRLLRHPHIIKL 79
Query: 107 -EGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
+ K + +++EY G +L +I +K+SE + ++F +Q++ A+++ + + H D
Sbjct: 80 YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRD 138
Query: 166 LKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWS 223
LKP+N+L+ + +K+ADFG + + + + GSP Y APE+++G Y + D+WS
Sbjct: 139 LKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 198
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
GV+++ L P+ ++ L + +S+ T+ P LSP + R+L +P+ RI
Sbjct: 199 CGVILYVMLCRRLPFDDESIPVL-FKNISNGVYTL-PKFLSPGAAGLIKRMLIVNPLNRI 256
Query: 284 SYEDLFSHPY 293
S ++ +
Sbjct: 257 SIHEIMQDDW 266
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y+Y+++E C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N L
Sbjct: 129 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 187
Query: 173 IKNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEI---LAGSPYNA--------K 218
I + LKL DFG A + P+ DS G+ YM PE ++ S N K
Sbjct: 188 IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 219 ADLWSLGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQ 276
+D+WSLG +++ +G P+ +S+L A + I P+ D D L L+
Sbjct: 248 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLK 306
Query: 277 KDPMRRISYEDLFSHPY 293
+DP +RIS +L +HPY
Sbjct: 307 RDPKQRISIPELLAHPY 323
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 125/250 (50%), Gaps = 13/250 (5%)
Query: 52 VGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAP----- 106
+G + +L Y T ++ L + + + ER + L LR P
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM--QGRIEREISYLRLLRHPHIIKL 78
Query: 107 -EGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
+ K + +++EY G +L +I +K+SE + ++F +Q++ A+++ + + H D
Sbjct: 79 YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRD 137
Query: 166 LKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWS 223
LKP+N+L+ + +K+ADFG + + + + GSP Y APE+++G Y + D+WS
Sbjct: 138 LKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 197
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
GV+++ L P+ ++ L + +S+ T+ P LSP + R+L +P+ RI
Sbjct: 198 CGVILYVMLCRRLPFDDESIPVL-FKNISNGVYTL-PKFLSPGAAGLIKRMLIVNPLNRI 255
Query: 284 SYEDLFSHPY 293
S ++ +
Sbjct: 256 SIHEIMQDDW 265
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y+Y+++E C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N L
Sbjct: 129 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 187
Query: 173 IKNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEI---LAGSPYNA--------K 218
I + LKL DFG A + P+ DS G+ YM PE ++ S N K
Sbjct: 188 IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 219 ADLWSLGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQ 276
+D+WSLG +++ +G P+ +S+L A + I P+ D D L L+
Sbjct: 248 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLK 306
Query: 277 KDPMRRISYEDLFSHPY 293
+DP +RIS +L +HPY
Sbjct: 307 RDPKQRISIPELLAHPY 323
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 129/262 (49%), Gaps = 18/262 (6%)
Query: 52 VGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAP----- 106
+G + +L Y T ++ L + + + ER + L LR P
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM--QGRIEREISYLRLLRHPHIIKL 73
Query: 107 -EGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
+ K + +++EY G +L +I +K+SE + ++F +Q++ A+++ + + H D
Sbjct: 74 YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRD 132
Query: 166 LKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWS 223
LKP+N+L+ + +K+ADFG + + + + GSP Y APE+++G Y + D+WS
Sbjct: 133 LKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 192
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
GV+++ L P+ ++ L + +S+ T+ P LSP + R+L +P+ RI
Sbjct: 193 CGVILYVMLCRRLPFDDESIPVL-FKNISNGVYTL-PKFLSPGAAGLIKRMLIVNPLNRI 250
Query: 284 SY-----EDLFSHPYPDLIHAP 300
S +D F P+ + P
Sbjct: 251 SIHEIMQDDWFKVDLPEYLLPP 272
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 9/187 (4%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
Y Y++ E GG+L I S ++ SE + +RQ++ + + +N + H DLKP+N+L+
Sbjct: 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLL 159
Query: 174 ----KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLV 228
K+ +++ DFG + F A D I G+ Y+APE+L G+ Y+ K D+WS GV++
Sbjct: 160 ESKSKDANIRIIDFGLSTHFEASKKXKDKI-GTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
Query: 229 FEALFGHAPYASCN-LSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYE 286
+ L G P+ N L+ +P +S D + + L P RIS
Sbjct: 218 YILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISAR 277
Query: 287 DLFSHPY 293
D H +
Sbjct: 278 DALDHEW 284
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 129/262 (49%), Gaps = 18/262 (6%)
Query: 52 VGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAP----- 106
+G + +L Y T ++ L + + + ER + L LR P
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM--QGRIEREISYLRLLRHPHIIKL 69
Query: 107 -EGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
+ K + +++EY G +L +I +K+SE + ++F +Q++ A+++ + + H D
Sbjct: 70 YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRD 128
Query: 166 LKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWS 223
LKP+N+L+ + +K+ADFG + + + + GSP Y APE+++G Y + D+WS
Sbjct: 129 LKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 188
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
GV+++ L P+ ++ L + +S+ T+ P LSP + R+L +P+ RI
Sbjct: 189 CGVILYVMLCRRLPFDDESIPVL-FKNISNGVYTL-PKFLSPGAAGLIKRMLIVNPLNRI 246
Query: 284 SY-----EDLFSHPYPDLIHAP 300
S +D F P+ + P
Sbjct: 247 SIHEIMQDDWFKVDLPEYLLPP 268
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +++ + G+L ++ LSE + ++ +R L+ + L + N+ H DLKP+NIL+
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157
Query: 174 KNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS------PYNAKADLWSLGV 226
++ +KL DFGF+ L P ++ + G+P Y+APEI+ S Y + D+WS GV
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 227 LVFEALFGHAPYAS-CNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRIS 284
+++ L G P+ + LR + P + S D +SR L P +R +
Sbjct: 218 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT 277
Query: 285 YEDLFSHPY 293
E+ +HP+
Sbjct: 278 AEEALAHPF 286
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y+Y+++E C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N L
Sbjct: 101 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 159
Query: 173 IKNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEI---LAGSPYNA--------K 218
I + LKL DFG A + P+ DS G+ YM PE ++ S N K
Sbjct: 160 IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 219 ADLWSLGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQ 276
+D+WSLG +++ +G P+ +S+L A + I P+ D D L L+
Sbjct: 220 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLK 278
Query: 277 KDPMRRISYEDLFSHPYPDLIHAPCAE 303
+DP +RIS +L +HPY + P +
Sbjct: 279 RDPKQRISIPELLAHPYVQIQTHPVNQ 305
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y+Y+++E C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N L
Sbjct: 81 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 139
Query: 173 IKNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEI---LAGSPYNA--------K 218
I + LKL DFG A + P+ DS G+ YM PE ++ S N K
Sbjct: 140 IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 199
Query: 219 ADLWSLGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQ 276
+D+WSLG +++ +G P+ +S+L A + I P+ D D L L+
Sbjct: 200 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLK 258
Query: 277 KDPMRRISYEDLFSHPY 293
+DP +RIS +L +HPY
Sbjct: 259 RDPKQRISIPELLAHPY 275
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 17/195 (8%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YVY++ E GG+L I + SE + + + +++L V H DLKP NIL
Sbjct: 89 KYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNIL 148
Query: 173 IKNNT-----LKLADFGFAQFLAPNDQGDSIQGSPLY----MAPEILAGSPYNAKADLWS 223
+ + +++ DFGFA+ L + + +P Y +APE+L Y+A D+WS
Sbjct: 149 YVDESGNPESIRICDFGFAKQLRAEN---GLLMTPCYTANFVAPEVLERQGYDAACDIWS 205
Query: 224 LGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKD 278
LGVL++ L G+ P+A+ + + + S ++ NS+S D +S++L D
Sbjct: 206 LGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVD 265
Query: 279 PMRRISYEDLFSHPY 293
P +R++ + HP+
Sbjct: 266 PHQRLTAALVLRHPW 280
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
++II+EY GG + L E Q +R+++ L +L H D+K N+L+
Sbjct: 100 LWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 158
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KLADFG A Q + ++ G+P +MAPE++ S Y++KAD+WSLG+ E
Sbjct: 159 EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 218
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHP 292
G P++ + ++ + P T+ N P +F+ L K+P R + ++L H
Sbjct: 219 RGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPTAKELLKHK 277
Query: 293 Y 293
+
Sbjct: 278 F 278
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 97/187 (51%), Gaps = 7/187 (3%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
R Y+++E GG+L I +K SE ++Q++ +L ++N+ H DLKP+N+L
Sbjct: 94 RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLL 153
Query: 173 IKNNT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLV 228
+++ + +K+ DFG + + G+ Y+APE+L Y+ K D+WS GV++
Sbjct: 154 LESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVIL 212
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPN--SLSPDCMDFLSRLLQKDPMRRISYE 286
+ L G+ P+ ++ + PP+ +S + + +L +P +RIS E
Sbjct: 213 YILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAE 272
Query: 287 DLFSHPY 293
+ +HP+
Sbjct: 273 EALNHPW 279
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y+Y+++E C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N L
Sbjct: 85 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 143
Query: 173 IKNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEI---LAGSPYNA--------K 218
I + LKL DFG A + P+ DS G+ YM PE ++ S N K
Sbjct: 144 IVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 203
Query: 219 ADLWSLGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQ 276
+D+WSLG +++ +G P+ +S+L A + I P+ D D L L+
Sbjct: 204 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLK 262
Query: 277 KDPMRRISYEDLFSHPY 293
+DP +RIS +L +HPY
Sbjct: 263 RDPKQRISIPELLAHPY 279
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P ++ ++E+ +GGDL I+ + E + + + +++ AL FL + + + DLK N+
Sbjct: 96 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNV 155
Query: 172 LIKNNT-LKLADFGFAQFLAPND-QGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
L+ + KLADFG + N + G+P Y+APEIL Y D W++GVL++
Sbjct: 156 LLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLY 215
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
E L GHAP+ + N L L+ + P L D L + K+P R+
Sbjct: 216 EMLCGHAPFEAENEDDLFEAILNDE--VVYPTWLHEDATGILKSFMTKNPTMRLG 268
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y+Y+++E C DL S+++ + + ++ + + + ++ A+ + ++ + H DLKP N L
Sbjct: 101 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 159
Query: 173 IKNNTLKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEI---LAGSPYNA--------K 218
I + LKL DFG A + P+ DS G+ YM PE ++ S N K
Sbjct: 160 IVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 219 ADLWSLGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQ 276
+D+WSLG +++ +G P+ +S+L A + I P+ D D L L+
Sbjct: 220 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLK 278
Query: 277 KDPMRRISYEDLFSHPYPDLIHAPCAE 303
+DP +RIS +L +HPY + P +
Sbjct: 279 RDPKQRISIPELLAHPYVQIQTHPVNQ 305
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
++II+EY GG + L E Q +R+++ L +L H D+K N+L+
Sbjct: 80 LWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 138
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KLADFG A Q + + G+P +MAPE++ S Y++KAD+WSLG+ E
Sbjct: 139 EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 198
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHP 292
G P++ + ++ + P T+ N P +F+ L K+P R + ++L H
Sbjct: 199 RGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPTAKELLKHK 257
Query: 293 Y 293
+
Sbjct: 258 F 258
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +++ + G+L ++ LSE + ++ +R L+ + L + N+ H DLKP+NIL+
Sbjct: 85 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 144
Query: 174 KNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS------PYNAKADLWSLGV 226
++ +KL DFGF+ L P ++ + G+P Y+APEI+ S Y + D+WS GV
Sbjct: 145 DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 204
Query: 227 LVFEALFGHAPYAS-CNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRIS 284
+++ L G P+ + LR + P + S D +SR L P +R +
Sbjct: 205 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT 264
Query: 285 YEDLFSHPY 293
E+ +HP+
Sbjct: 265 AEEALAHPF 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
++II+EY GG + L E Q +R+++ L +L H D+K N+L+
Sbjct: 95 LWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 153
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
++ +KLADFG A Q + + G+P +MAPE++ S Y++KAD+WSLG+ E
Sbjct: 154 EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 213
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHP 292
G P++ + ++ + P T+ N P +F+ L K+P R + ++L H
Sbjct: 214 RGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPTAKELLKHK 272
Query: 293 Y 293
+
Sbjct: 273 F 273
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 136 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 192
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 252
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 253 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 312
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 313 KTEPTQRMTITEFMNHPW 330
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 84 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 201 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 260
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 261 KTEPTQRMTITEFMNHPW 278
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 85 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 141
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 201
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 202 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 261
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 262 KTEPTQRMTITEFMNHPW 279
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 12/189 (6%)
Query: 117 IILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
I++E DGG+L S I R + +E + + ++ + A+++L N+ H D+KP+N+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 175 ----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+WSLGV+++
Sbjct: 152 SKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 211
Query: 231 ALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKDPMRRIS 284
L G+ P+ S + +S + P + +S + + LL+ +P +R++
Sbjct: 212 LLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 271
Query: 285 YEDLFSHPY 293
+ +HP+
Sbjct: 272 ITEFMNHPW 280
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 12/189 (6%)
Query: 117 IILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
I++E DGG+L S I R + +E + + ++ + A+++L N+ H D+KP+N+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 175 ----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+WSLGV+++
Sbjct: 152 SKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 211
Query: 231 ALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKDPMRRIS 284
L G+ P+ S + +S + P + +S + + LL+ +P +R++
Sbjct: 212 LLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 271
Query: 285 YEDLFSHPY 293
+ +HP+
Sbjct: 272 ITEFMNHPW 280
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 100 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 156
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 216
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 217 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 276
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 277 KTEPTQRMTITEFMNHPW 294
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YVY++ E GG+L I + SE + + + +++L V H DLKP NIL
Sbjct: 89 KYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNIL 148
Query: 173 IKNNT-----LKLADFGFAQFLAPNDQGDSIQGSPLY----MAPEILAGSPYNAKADLWS 223
+ + +++ DFGFA+ L + + +P Y +APE+L Y+A D+WS
Sbjct: 149 YVDESGNPESIRICDFGFAKQLRAEN---GLLXTPCYTANFVAPEVLERQGYDAACDIWS 205
Query: 224 LGVLVFEALFGHAPYASC--NLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKD 278
LGVL++ L G+ P+A+ + + + S ++ NS+S D +S+ L D
Sbjct: 206 LGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVD 265
Query: 279 PMRRISYEDLFSHPY 293
P +R++ + HP+
Sbjct: 266 PHQRLTAALVLRHPW 280
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 130 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 186
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 246
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 247 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 306
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 307 KTEPTQRMTITEFMNHPW 324
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 92 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 148
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 208
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 209 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 268
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 269 KTEPTQRMTITEFMNHPW 286
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 91 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 147
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 207
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 208 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 267
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 268 KTEPTQRMTITEFMNHPW 285
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 90 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 146
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ ++ + +P Y+APE+L Y+ D+
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 206
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 207 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 266
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 267 KTEPTQRMTITEFMNHPW 284
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y+++E C GG+L + E + ++ ++ A+ + + NV H DLKP+N L
Sbjct: 98 IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL 157
Query: 175 NNT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
++ LKL DFG A P + G+P Y++P++L G Y + D WS GV+++
Sbjct: 158 TDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYV 216
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISYED 287
L G+ P+++ ++ + + T P ++SP + RLL K P +RI+
Sbjct: 217 LLCGYPPFSAPTDXEVMLK-IREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQ 275
Query: 288 LFSHPY 293
H +
Sbjct: 276 ALEHEW 281
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 15/198 (7%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 84 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ ++ +P Y+APE+L Y+ D+
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 201 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 260
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 261 KTEPTQRMTITEFMNHPW 278
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y+++E C GG+L + E + ++ ++ A+ + + NV H DLKP+N L
Sbjct: 81 IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL 140
Query: 175 NNT----LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
++ LKL DFG A P + G+P Y++P++L G Y + D WS GV+++
Sbjct: 141 TDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYV 199
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLLQKDPMRRISYED 287
L G+ P+++ ++ + + T P ++SP + RLL K P +RI+
Sbjct: 200 LLCGYPPFSAPTDXEVMLK-IREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQ 258
Query: 288 LFSHPY 293
H +
Sbjct: 259 ALEHEW 264
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK- 174
YI++EY DG L + + ++ + + + AL F +N + H D+KP NILI
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQ------GSPLYMAPEILAGSPYNAKADLWSLGVLV 228
N +K+ DFG A+ +A D G+S+ G+ Y++PE G +A++D++SLG ++
Sbjct: 152 TNAVKVVDFGIARAIA--DSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPNS----LSPDCMDFLSRLLQKDPMRR 282
+E L G P+ + + Q + P IPP++ LS D + + L K+P R
Sbjct: 210 YEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 115/244 (47%), Gaps = 29/244 (11%)
Query: 3 RYGTVRYGTVRLGSVKYGQVQLSTVRYGKVRYSQVRSDTVRSGTVRYDIVGSSTIRYGEL 62
+ G + +LGS YG+V L + G +S+ ++
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNG---HSEKAIKVIKKS----------------- 72
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRPRYVYIILEYC 122
Q+D + S K+ + Y+ I+ + P ++ + + +Y Y++ E+
Sbjct: 73 QFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNI----IKLFDVFEDKKYFYLVTEFY 128
Query: 123 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN----TL 178
+GG+L I + K E ++Q++ + +L ++N+ H D+KP+NIL++N +
Sbjct: 129 EGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNI 188
Query: 179 KLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPY 238
K+ DFG + F + + + G+ Y+APE+L YN K D+WS GV+++ L G+ P+
Sbjct: 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPF 247
Query: 239 ASCN 242
N
Sbjct: 248 GGQN 251
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 24/226 (10%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKL----SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 170
+Y++ E+ DG DLC I SE ++RQ++ AL++ +NN+ H D+KP
Sbjct: 103 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHC 162
Query: 171 ILI--KNNT--LKLADFGFAQFLAPND--QGDSIQGSPLYMAPEILAGSPYNAKADLWSL 224
+L+ K N+ +KL FG A L + G + G+P +MAPE++ PY D+W
Sbjct: 163 VLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKREPYGKPVDVWGC 221
Query: 225 GVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKDPMR 281
GV++F L G P+ + + + + P + +S D + R+L DP
Sbjct: 222 GVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAE 279
Query: 282 RISYEDLFSHPYPDLIHAPCAESHQTAIRI-VTDAIHHDRENNSRR 326
RI+ + +HP+ E + A +I + + + R+ N+RR
Sbjct: 280 RITVYEALNHPW-------LKERDRYAYKIHLPETVEQLRKFNARR 318
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK- 174
YI++EY DG L + + ++ + + + AL F +N + H D+KP NI+I
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQ------GSPLYMAPEILAGSPYNAKADLWSLGVLV 228
N +K+ DFG A+ +A D G+S+ G+ Y++PE G +A++D++SLG ++
Sbjct: 152 TNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPNS----LSPDCMDFLSRLLQKDPMRR 282
+E L G P+ + + Q + P IPP++ LS D + + L K+P R
Sbjct: 210 YEVLTGEPPFTGDSPDSVAYQHVREDP--IPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 17/195 (8%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
++VY++ E GG+L I + SE + + + +++L V H DLKP NIL
Sbjct: 94 KHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
Query: 173 IKNNT-----LKLADFGFAQFLAPNDQGDSIQGSPLY----MAPEILAGSPYNAKADLWS 223
+ + L++ DFGFA+ L + + +P Y +APE+L Y+ D+WS
Sbjct: 154 YVDESGNPECLRICDFGFAKQLRAEN---GLLMTPCYTANFVAPEVLKRQGYDEGCDIWS 210
Query: 224 LGVLVFEALFGHAPYAS--CNLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKD 278
LG+L++ L G+ P+A+ + + + S T+ N++S D +S++L D
Sbjct: 211 LGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVD 270
Query: 279 PMRRISYEDLFSHPY 293
P +R++ + + HP+
Sbjct: 271 PHQRLTAKQVLQHPW 285
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 17/195 (8%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
++VY++ E GG+L I + SE + + + +++L V H DLKP NIL
Sbjct: 94 KHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
Query: 173 IKNNT-----LKLADFGFAQFLAPNDQGDSIQGSPLY----MAPEILAGSPYNAKADLWS 223
+ + L++ DFGFA+ L + + +P Y +APE+L Y+ D+WS
Sbjct: 154 YVDESGNPECLRICDFGFAKQLRAEN---GLLMTPCYTANFVAPEVLKRQGYDEGCDIWS 210
Query: 224 LGVLVFEALFGHAPYAS--CNLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKD 278
LG+L++ L G+ P+A+ + + + S T+ N++S D +S++L D
Sbjct: 211 LGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVD 270
Query: 279 PMRRISYEDLFSHPY 293
P +R++ + + HP+
Sbjct: 271 PHQRLTAKQVLQHPW 285
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 24/226 (10%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKL----SEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 170
+Y++ E+ DG DLC I SE ++RQ++ AL++ +NN+ H D+KP
Sbjct: 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHC 160
Query: 171 ILI--KNNT--LKLADFGFAQFLAPND--QGDSIQGSPLYMAPEILAGSPYNAKADLWSL 224
+L+ K N+ +KL FG A L + G + G+P +MAPE++ PY D+W
Sbjct: 161 VLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKREPYGKPVDVWGC 219
Query: 225 GVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKDPMR 281
GV++F L G P+ + + + + P + +S D + R+L DP
Sbjct: 220 GVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAE 277
Query: 282 RISYEDLFSHPYPDLIHAPCAESHQTAIRI-VTDAIHHDRENNSRR 326
RI+ + +HP+ E + A +I + + + R+ N+RR
Sbjct: 278 RITVYEALNHPW-------LKERDRYAYKIHLPETVEQLRKFNARR 316
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+IL++ GGDL + + +E + ++ +L LAL L + + DLKP+NIL+
Sbjct: 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD 160
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + + + + S G+ YMAPE++ + AD WS GVL+FE L
Sbjct: 161 EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + + L A + + P LSP+ L L +++P R+
Sbjct: 221 TGTLPFQGKDRKETMTMIL-KAKLGM-PQFLSPEAQSLLRMLFKRNPANRLG 270
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK- 174
YI++EY DG L + + ++ + + + AL F +N + H D+KP NI+I
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQ------GSPLYMAPEILAGSPYNAKADLWSLGVLV 228
N +K+ DFG A+ +A D G+S+ G+ Y++PE G +A++D++SLG ++
Sbjct: 152 TNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPNS----LSPDCMDFLSRLLQKDPMRR 282
+E L G P+ + + Q + P IPP++ LS D + + L K+P R
Sbjct: 210 YEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+IL++ GGDL + + +E + ++ +L LAL L + + DLKP+NIL+
Sbjct: 102 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD 161
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + + + + S G+ YMAPE++ + AD WS GVL+FE L
Sbjct: 162 EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 221
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + + L A + + P LSP+ L L +++P R+
Sbjct: 222 TGTLPFQGKDRKETMTMIL-KAKLGM-PQFLSPEAQSLLRMLFKRNPANRLG 271
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK- 174
YI++EY DG L + + ++ + + + AL F +N + H D+KP NI+I
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQ------GSPLYMAPEILAGSPYNAKADLWSLGVLV 228
N +K+ DFG A+ +A D G+S+ G+ Y++PE G +A++D++SLG ++
Sbjct: 169 TNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 226
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPNS----LSPDCMDFLSRLLQKDPMRR 282
+E L G P+ + + Q + P IPP++ LS D + + L K+P R
Sbjct: 227 YEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK- 174
YI++EY DG L + + ++ + + + AL F +N + H D+KP NI+I
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQ------GSPLYMAPEILAGSPYNAKADLWSLGVLV 228
N +K+ DFG A+ +A D G+S+ G+ Y++PE G +A++D++SLG ++
Sbjct: 152 TNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPNS----LSPDCMDFLSRLLQKDPMRR 282
+E L G P+ + + Q + P IPP++ LS D + + L K+P R
Sbjct: 210 YEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK- 174
YI++EY DG L + + ++ + + + AL F +N + H D+KP NI+I
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQ------GSPLYMAPEILAGSPYNAKADLWSLGVLV 228
N +K+ DFG A+ +A D G+S+ G+ Y++PE G +A++D++SLG ++
Sbjct: 152 TNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPNS----LSPDCMDFLSRLLQKDPMRR 282
+E L G P+ + + Q + P IPP++ LS D + + L K+P R
Sbjct: 210 YEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+IL++ GGDL + + +E + ++ +L LAL L + + DLKP+NIL+
Sbjct: 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD 160
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + + + + S G+ YMAPE++ + AD WS GVL+FE L
Sbjct: 161 EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + + L A + + P LSP+ L L +++P R+
Sbjct: 221 TGTLPFQGKDRKETMTMIL-KAKLGM-PQFLSPEAQSLLRMLFKRNPANRLG 270
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 99/182 (54%), Gaps = 4/182 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V+++LE C L + + L+E + + ++RQ+VL ++L N V H DLK N+ +
Sbjct: 91 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 150
Query: 174 KNN-TLKLADFGFAQFLA-PNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ +K+ DFG A + ++ ++ G+P Y+APE+L+ ++ + D+WS+G +++
Sbjct: 151 NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 210
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
L G P+ + L + + + +I P ++P + ++LQ DP R + +L +
Sbjct: 211 LVGKPPFETSCLKETYLR-IKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINELLND 268
Query: 292 PY 293
+
Sbjct: 269 EF 270
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 98/179 (54%), Gaps = 4/179 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V+++LE C L + + L+E + + ++RQ+VL ++L N V H DLK N+ +
Sbjct: 95 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 154
Query: 174 KNN-TLKLADFGFAQFLA-PNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ +K+ DFG A + ++ ++ G+P Y+APE+L+ ++ + D+WS+G +++
Sbjct: 155 NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 214
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
L G P+ + L + + + +I P ++P + ++LQ DP R + +L +
Sbjct: 215 LVGKPPFETSCLKETYLR-IKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINELLN 271
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 99/182 (54%), Gaps = 4/182 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V+++LE C L + + L+E + + ++RQ+VL ++L N V H DLK N+ +
Sbjct: 91 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 150
Query: 174 KNN-TLKLADFGFAQFLA-PNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ +K+ DFG A + ++ ++ G+P Y+APE+L+ ++ + D+WS+G +++
Sbjct: 151 NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 210
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
L G P+ + L + + + +I P ++P + ++LQ DP R + +L +
Sbjct: 211 LVGKPPFETSCLKETYLR-IKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINELLND 268
Query: 292 PY 293
+
Sbjct: 269 EF 270
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 115 VYIILEYCDGGDLCS-FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +++EY DGG+L I L+E F++Q+ ++ + + + H DLKP+NIL
Sbjct: 161 IVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILC 220
Query: 174 KN---NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
N +K+ DFG A+ P ++ G+P ++APE++ + D+WS+GV+ +
Sbjct: 221 VNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYM 280
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPN--SLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G +P+ N ++ L+ +S + +F+S+LL K+ RIS +
Sbjct: 281 LLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEA 340
Query: 289 FSHPY 293
HP+
Sbjct: 341 LKHPW 345
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 98/182 (53%), Gaps = 4/182 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V+++LE C L + + L+E + + ++RQ+VL ++L N V H DLK N+ +
Sbjct: 89 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 148
Query: 174 KNN-TLKLADFGFAQFLAPNDQGDSIQ-GSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ +K+ DFG A + + + + G+P Y+APE+L+ ++ + D+WS+G +++
Sbjct: 149 NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 208
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
L G P+ + L + + + +I P ++P + ++LQ DP R + +L +
Sbjct: 209 LVGKPPFETSCLKETYLR-IKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINELLND 266
Query: 292 PY 293
+
Sbjct: 267 EF 268
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 96/179 (53%), Gaps = 4/179 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+VY++LE C L + + ++E + + F+RQ + +++L N V H DLK N+ +
Sbjct: 116 FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 175
Query: 174 KNNT-LKLADFGFAQFLA-PNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
++ +K+ DFG A + ++ ++ G+P Y+APE+L ++ + D+WSLG +++
Sbjct: 176 NDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
L G P+ + L + + + ++ P ++P + R+L DP R S +L +
Sbjct: 236 LVGKPPFETSCLKETYIR-IKKNEYSV-PRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
++++++ GGDL ++ + E + F+ +LV+AL +L+ + H D+KP NIL+
Sbjct: 90 MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD 149
Query: 174 KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLVFE 230
++ + + DF A L Q ++ G+ YMAPE+ + G+ Y+ D WSLGV +E
Sbjct: 150 EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYE 209
Query: 231 ALFGHAPYA--SCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS-YED 287
L G PY S S+ + +T P++ S + + L +LL+ +P +R S D
Sbjct: 210 LLRGRRPYHIRSSTSSKEIVHTFETTVVTY-PSAWSQEMVSLLKKLLEPNPDQRFSQLSD 268
Query: 288 LFSHPY 293
+ + PY
Sbjct: 269 VQNFPY 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 98/182 (53%), Gaps = 4/182 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V+++LE C L + + L+E + + ++RQ+VL ++L N V H DLK N+ +
Sbjct: 113 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 172
Query: 174 KNN-TLKLADFGFAQFLAPNDQGDSIQ-GSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ +K+ DFG A + + + + G+P Y+APE+L+ ++ + D+WS+G +++
Sbjct: 173 NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 232
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
L G P+ + L + + + +I P ++P + ++LQ DP R + +L +
Sbjct: 233 LVGKPPFETSCLKETYLR-IKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINELLND 290
Query: 292 PY 293
+
Sbjct: 291 EF 292
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 97/179 (54%), Gaps = 4/179 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V+++LE C L + + L+E + + ++RQ+VL ++L N V H DLK N+ +
Sbjct: 115 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 174
Query: 174 KNN-TLKLADFGFAQFLAPNDQGDSIQ-GSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ +K+ DFG A + + + + G+P Y+APE+L+ ++ + D+WS+G +++
Sbjct: 175 NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 234
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
L G P+ + L + + + +I P ++P + ++LQ DP R + +L +
Sbjct: 235 LVGKPPFETSCLKETYLR-IKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINELLN 291
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y ++EY +GGDL I+ K E Q + ++ + L FL + + + DLK N+++
Sbjct: 95 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 175 NNT-LKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +K+ADFG + + G+P Y+APEI+A PY D W+ GVL++E L
Sbjct: 155 SEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 214
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + +L Q++ ++ P SLS + + L+ K P +R+
Sbjct: 215 AGQPPFDGEDEDEL-FQSIMEHNVSY-PKSLSKEAVSICKGLMTKHPAKRLG 264
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 97/189 (51%), Gaps = 4/189 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+VY++LE C L + + ++E + + F+RQ + +++L N V H DLK N+ +
Sbjct: 100 FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 159
Query: 174 KNNT-LKLADFGFAQFLA-PNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
++ +K+ DFG A + ++ + G+P Y+APE+L ++ + D+WSLG +++
Sbjct: 160 NDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 219
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
L G P+ + L + + + P ++P + R+L DP R S +L +
Sbjct: 220 LVGKPPFETSCLKETYIRIKKNEYSV--PRHINPVASALIRRMLHADPTLRPSVAELLTD 277
Query: 292 PYPDLIHAP 300
+ +AP
Sbjct: 278 EFFTSGYAP 286
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ ++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 82 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 141
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L ++ + G+ YM+PE L G+ Y+ ++D+WS+G+ + E
Sbjct: 142 NSRGEIKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 200
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHP 292
G P + +L ++ P +P S + DF+++ L K+P R + L H
Sbjct: 201 VGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 260
Query: 293 Y 293
+
Sbjct: 261 F 261
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ ++++E +GG+L I+ + SE + +R+LV A+ + + V H DLKP+N+L
Sbjct: 80 HTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLF 139
Query: 174 ----KNNTLKLADFGFAQFLAPNDQGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLV 228
N +K+ DFGFA+ P++Q L Y APE+L + Y+ DLWSLGV++
Sbjct: 140 TDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVIL 199
Query: 229 FEALFGHAPYAS------CNLSQLRAQALSSAPITIPPNS---LSPDCMDFLSRLLQKDP 279
+ L G P+ S C + + + + + +S + D + LL DP
Sbjct: 200 YTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDP 259
Query: 280 MRRISYEDL 288
+R+ L
Sbjct: 260 NKRLKMSGL 268
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 174
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 284
Query: 175 NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFG + + + G+P Y+APE+L + Y D W LGV+++E +
Sbjct: 285 DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 344
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + + +L L P +L P+ LS LL+KDP +R+
Sbjct: 345 GRLPFYNQDHEKLFELILMEE--IRFPRTLGPEAKSLLSGLLKKDPKQRLG 393
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 174
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 228 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 287
Query: 175 NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFG + + + G+P Y+APE+L + Y D W LGV+++E +
Sbjct: 288 DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 347
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + + +L L P +L P+ LS LL+KDP +R+
Sbjct: 348 GRLPFYNQDHEKLFELILMEE--IRFPRTLGPEAKSLLSGLLKKDPKQRLG 396
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+VY++LE C L + + ++E + + F+RQ + +++L N V H DLK N+ +
Sbjct: 116 FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 175
Query: 174 KNNT-LKLADFGFAQFLA-PNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
++ +K+ DFG A + ++ + G+P Y+APE+L ++ + D+WSLG +++
Sbjct: 176 NDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
L G P+ + L + + + ++ P ++P + R+L DP R S +L +
Sbjct: 236 LVGKPPFETSCLKETYIR-IKKNEYSV-PRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
++II+EY GG ++ L E +R+++ L +L H D+K N+L+
Sbjct: 92 LWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS 150
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KLADFG A Q + + G+P +MAPE++ S Y+ KAD+WSLG+ E
Sbjct: 151 EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELA 210
Query: 233 FGHAPYASCNLSQLRAQAL--SSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
G P + +L +R L ++P T+ P +F+ L KDP R + ++L
Sbjct: 211 KGEPP--NSDLHPMRVLFLIPKNSPPTLEGQHSKP-FKEFVEACLNKDPRFRPTAKELLK 267
Query: 291 HPY 293
H +
Sbjct: 268 HKF 270
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 12/189 (6%)
Query: 117 IILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
I+ E DGG+L S I R + +E + + + + A+++L N+ H D+KP+N+L
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 175 ----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
N LKL DFGFA+ ++ + +P Y+APE+L Y+ D WSLGV+ +
Sbjct: 196 SKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYI 255
Query: 231 ALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKDPMRRIS 284
L G+ P+ S + +S + P + +S + + LL+ +P +R +
Sbjct: 256 LLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXT 315
Query: 285 YEDLFSHPY 293
+ +HP+
Sbjct: 316 ITEFXNHPW 324
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 7/185 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ ++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 98 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 157
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L + +S G+ YM+PE L G+ Y+ ++D+WS+G+ + E
Sbjct: 158 NSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 216
Query: 233 FGHAPYASCNLS----QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
G P S + S +L ++ P +P S + DF+++ L K+P R + L
Sbjct: 217 VGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 276
Query: 289 FSHPY 293
H +
Sbjct: 277 MVHAF 281
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+++++E+C G + I++ + L E R+++ L L ++ V H D+K QN+L
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161
Query: 173 IKNNT-LKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILA-----GSPYNAKADLWSLG 225
+ N +KL DFG AQ + ++ G+P +MAPE++A + Y+ K+DLWSLG
Sbjct: 162 LTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 221
Query: 226 VLVFEALFGHAPYASCNLSQLRAQAL---SSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
+ E G P C++ +RA L + AP + S F+ L K+ +R
Sbjct: 222 ITAIEMAEGAPPL--CDMHPMRALFLIPRNPAP-RLKSKKWSKKFQSFIESCLVKNHSQR 278
Query: 283 ISYEDLFSHPY 293
+ E L HP+
Sbjct: 279 PATEQLMKHPF 289
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+VY++LE C L + + ++E + + F+RQ + +++L N V H DLK N+ +
Sbjct: 116 FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL 175
Query: 174 KNNT-LKLADFGFAQFLA-PNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
++ +K+ DFG A + ++ + G+P Y+APE+L ++ + D+WSLG +++
Sbjct: 176 NDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 232 LFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
L G P+ + L + + + ++ P ++P + R+L DP R S +L +
Sbjct: 236 LVGKPPFETSCLKETYIR-IKKNEYSV-PRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 93/170 (54%), Gaps = 4/170 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 175
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 85 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 144
Query: 176 NTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFG 234
+K+ DFG + ++ + G+P Y+APE+L + Y D W LGV+++E + G
Sbjct: 145 GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
Query: 235 HAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
P+ + + +L L P +LSP+ L+ LL+KDP +R+
Sbjct: 205 RLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLG 252
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 93/170 (54%), Gaps = 4/170 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 175
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 176 NTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFG 234
+K+ DFG + ++ + G+P Y+APE+L + Y D W LGV+++E + G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 235 HAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
P+ + + +L L P +LSP+ L+ LL+KDP +R+
Sbjct: 202 RLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 93/170 (54%), Gaps = 4/170 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 175
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 176 NTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFG 234
+K+ DFG + ++ + G+P Y+APE+L + Y D W LGV+++E + G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 235 HAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
P+ + + +L L P +LSP+ L+ LL+KDP +R+
Sbjct: 202 RLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
Y+++EY +G L +I SH LS F Q++ +K + + H D+KPQNILI +
Sbjct: 87 YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS 146
Query: 176 N-TLKLADFGFAQFLAPND--QGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
N TLK+ DFG A+ L+ Q + + G+ Y +PE G + D++S+G++++E L
Sbjct: 147 NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML 206
Query: 233 FGHAPY 238
G P+
Sbjct: 207 VGEPPF 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 98/185 (52%), Gaps = 10/185 (5%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
R +Y+ILEY G+L ++ E + + +L AL + V H D+KP+N+L
Sbjct: 96 RRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLL 155
Query: 173 IKNNTLK-LADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ +ADFG++ AP+ + ++ G+ Y+ PE++ G +N K DLW +GVL +E
Sbjct: 156 LGLKGELKIADFGWSVH-APSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYEL 214
Query: 232 LFGHAPYASCNLSQLRAQALS---SAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G+ P+ S + ++ + + P ++P + D +S+LL+ +P R+ +
Sbjct: 215 LVGNPPFESASHNETYRRIVKVDLKFPASVPTGA-----QDLISKLLRHNPSERLPLAQV 269
Query: 289 FSHPY 293
+HP+
Sbjct: 270 SAHPW 274
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y ++EY +GGDL I+ + E + ++ + L FL+ + + DLK N+++
Sbjct: 96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQ-----GSPLYMAPEILAGSPYNAKADLWSLGVLV 228
+ +K+ADFG + + D + G+P Y+APEI+A PY D W+ GVL+
Sbjct: 156 SEGHIKIADFG----MCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 211
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
+E L G AP+ + +L Q++ + P S+S + + L+ K P +R+
Sbjct: 212 YEMLAGQAPFEGEDEDEL-FQSIMEHNVAY-PKSMSKEAVAICKGLMTKHPGKRLG 265
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 110 KRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+R R ++++ EYCD L R + E + Q + A+ F ++N H D+KP+
Sbjct: 72 RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPE 131
Query: 170 NILI-KNNTLKLADFGFAQFL-APNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGV 226
NILI K++ +KL DFGFA+ L P+D D + Y +PE+L G + Y D+W++G
Sbjct: 132 NILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGC 191
Query: 227 LVFEALFGHAPY-ASCNLSQL------------RAQALSS-----APITIP-PNSLSPDC 267
+ E L G + ++ QL R Q + S + + IP P + P
Sbjct: 192 VFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLE 251
Query: 268 MDF----------LSRLLQKDPMRRISYEDLFSHPY 293
+ F L L DP R++ E L HPY
Sbjct: 252 LKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 114 YVYIILEYCDGGDLCSFIRSHE---KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 170
++ I +E GG L + +RS K +E + +Q++ LK+L +N + H D+K N
Sbjct: 93 FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDN 152
Query: 171 ILIK--NNTLKLADFGFAQFLAP-NDQGDSIQGSPLYMAPEILAGSP--YNAKADLWSLG 225
+LI + LK++DFG ++ LA N ++ G+ YMAPEI+ P Y AD+WSLG
Sbjct: 153 VLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLG 212
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIP---PNSLSPDCMDFLSRLLQKDPMRR 282
+ E G P+ L + +A + P S+S + F+ + + DP +R
Sbjct: 213 CTIIEMATGKPPFY--ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
Query: 283 ISYEDLF 289
DL
Sbjct: 271 ACANDLL 277
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-- 173
Y++ E GG + + I+ + +E + + VR + AL FL + H DLKP+NIL
Sbjct: 87 YLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCES 146
Query: 174 --KNNTLKLADFGFAQFLAPNDQGDSIQ--------GSPLYMAPEILA-----GSPYNAK 218
K + +K+ DF + N+ I GS YMAPE++ + Y+ +
Sbjct: 147 PEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKR 206
Query: 219 ADLWSLGVLVFEALFGHAPYAS-------------CNLSQLRA-QALSSAPITIPPNS-- 262
DLWSLGV+++ L G+ P+ C + Q + +++ P
Sbjct: 207 CDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA 266
Query: 263 -LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+S + D +S+LL +D +R+S + HP+
Sbjct: 267 HISSEAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 4/170 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 175
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 176 NTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFG 234
+K+ DFG + ++ G+P Y+APE+L + Y D W LGV+++E + G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 235 HAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
P+ + + +L L P +LSP+ L+ LL+KDP +R+
Sbjct: 202 RLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 4/170 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 175
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 176 NTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFG 234
+K+ DFG + ++ G+P Y+APE+L + Y D W LGV+++E + G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 235 HAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
P+ + + +L L P +LSP+ L+ LL+KDP +R+
Sbjct: 202 RLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 174
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 86 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 145
Query: 175 NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFG + + G+P Y+APE+L + Y D W LGV+++E +
Sbjct: 146 DGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 205
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + + +L L P +L P+ LS LL+KDP +R+
Sbjct: 206 GRLPFYNQDHEKLFELILMEE--IRFPRTLGPEAKSLLSGLLKKDPKQRLG 254
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 4/170 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 175
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141
Query: 176 NTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFG 234
+K+ DFG + ++ G+P Y+APE+L + Y D W LGV+++E + G
Sbjct: 142 GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Query: 235 HAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
P+ + + +L L P +LSP+ L+ LL+KDP +R+
Sbjct: 202 RLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 174
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 85 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 144
Query: 175 NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFG + + G+P Y+APE+L + Y D W LGV+++E +
Sbjct: 145 DGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 204
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + + +L L P +L P+ LS LL+KDP +R+
Sbjct: 205 GRLPFYNQDHEKLFELILMEE--IRFPRTLGPEAKSLLSGLLKKDPKQRLG 253
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 4/170 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KN 175
++EY +GG+L + +E + + + ++V AL++L +V + D+K +N+++ K+
Sbjct: 87 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 146
Query: 176 NTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFG 234
+K+ DFG + ++ G+P Y+APE+L + Y D W LGV+++E + G
Sbjct: 147 GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
Query: 235 HAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
P+ + + +L L P +LSP+ L+ LL+KDP +R+
Sbjct: 207 RLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLG 254
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 114 YVYIILEYCDGGDLCSFIRSHE---KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 170
++ I +E GG L + +RS K +E + +Q++ LK+L +N + H D+K N
Sbjct: 79 FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDN 138
Query: 171 ILIK--NNTLKLADFGFAQFLAP-NDQGDSIQGSPLYMAPEILAGSP--YNAKADLWSLG 225
+LI + LK++DFG ++ LA N ++ G+ YMAPEI+ P Y AD+WSLG
Sbjct: 139 VLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLG 198
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIP---PNSLSPDCMDFLSRLLQKDPMRR 282
+ E G P+ L + +A + P S+S + F+ + + DP +R
Sbjct: 199 CTIIEMATGKPPFYE--LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
Query: 283 ISYEDLF 289
DL
Sbjct: 257 ACANDLL 263
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y ++EY +GGDL I+ + E + ++ + L FL+ + + DLK N+++
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 175 NNT-LKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +K+ADFG + + G+P Y+APEI+A PY D W+ GVL++E L
Sbjct: 477 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G AP+ + +L Q++ + P S+S + + L+ K P +R+
Sbjct: 537 AGQAPFEGEDEDEL-FQSIMEHNVAY-PKSMSKEAVAICKGLMTKHPGKRLG 586
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLR-ENNVCHFDLKPQNILI-K 174
++EY +GG+L + SE + + + ++V AL +L E NV + DLK +N+++ K
Sbjct: 87 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 146
Query: 175 NNTLKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
+ +K+ DFG + + G+P Y+APE+L + Y D W LGV+++E +
Sbjct: 147 DGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 206
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + + +L L P +L P+ LS LL+KDP +R+
Sbjct: 207 GRLPFYNQDHEKLFELILMEE--IRFPRTLGPEAKSLLSGLLKKDPKQRLG 255
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQ 226
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N + A+ + P P D + +LL D +R+ E+
Sbjct: 227 LVAGLPPFRAGNEGLIFAKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 285 YGPLKAHPF 293
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 108 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 167
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + +S G+ Y++PE+L +DLW+LG ++++
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 227
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 228 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 285
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 286 YGPLKAHPF 294
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 104 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 163
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + +S G+ Y++PE+L +DLW+LG ++++
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 223
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 224 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 281
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 282 YGPLKAHPF 290
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N + A+ + P P D + +LL D +R+ E+
Sbjct: 227 LVAGLPPFRAGNEGLIFAKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 285 YGPLKAHPF 293
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 107/190 (56%), Gaps = 16/190 (8%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
++Y++ E + G + + + + LSE Q + + + L+ +++L + H D+KP N+L+
Sbjct: 112 HLYMVFELVNQGPVME-VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV 170
Query: 174 -KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSP--YNAKA-DLWSLGVLV 228
++ +K+ADFG + +F + + G+P +MAPE L+ + ++ KA D+W++GV +
Sbjct: 171 GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
Query: 229 FEALFGHAPYAS----CNLSQLRAQALSSAPITIPPN-SLSPDCMDFLSRLLQKDPMRRI 283
+ +FG P+ C S++++QAL P ++ D D ++R+L K+P RI
Sbjct: 231 YCFVFGQCPFMDERIMCLHSKIKSQALE-----FPDQPDIAEDLKDLITRMLDKNPESRI 285
Query: 284 SYEDLFSHPY 293
++ HP+
Sbjct: 286 VVPEIKLHPW 295
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 17/191 (8%)
Query: 117 IILEYCDGGDLCSFI----RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+++ +GGD+ I + E + + Q+V L+ L + N+ + DLKP+N+L
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL 321
Query: 173 IKNN-TLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ ++ ++++D G A + A + G+P +MAPE+L G Y+ D ++LGV ++E
Sbjct: 322 LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381
Query: 231 ALFGHAPYAS----CNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYE 286
+ P+ + +L+ + L A P+ SP DF LLQKDP +R+ +
Sbjct: 382 MIAARGPFRARGEKVENKELKQRVLEQA--VTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
Query: 287 D-----LFSHP 292
D L +HP
Sbjct: 440 DGSCDGLRTHP 450
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 107 LYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + +S G+ Y++PE+L + +DLW+LG ++++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQ 226
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 227 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 285 YGPLKAHPF 293
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P + IL+ +GGDL + H SE + + +++L L+ + V + DLKP NI
Sbjct: 263 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 322
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEIL-AGSPYNAKADLWSLGVLVF 229
L+ ++ ++++D G A + S+ G+ YMAPE+L G Y++ AD +SLG ++F
Sbjct: 323 LLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 381
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIP---PNSLSPDCMDFLSRLLQKDPMRRI 283
+ L GH+P+ + +T+ P+S SP+ L LLQ+D RR+
Sbjct: 382 KLLRGHSPFRQHKTKD--KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 436
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P + IL+ +GGDL + H SE + + +++L L+ + V + DLKP NI
Sbjct: 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEIL-AGSPYNAKADLWSLGVLVF 229
L+ ++ ++++D G A + S+ G+ YMAPE+L G Y++ AD +SLG ++F
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIP---PNSLSPDCMDFLSRLLQKDPMRRI 283
+ L GH+P+ + +T+ P+S SP+ L LLQ+D RR+
Sbjct: 383 KLLRGHSPFRQHKTKD--KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 437
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 17/191 (8%)
Query: 117 IILEYCDGGDLCSFI----RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+++ +GGD+ I + E + + Q+V L+ L + N+ + DLKP+N+L
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL 321
Query: 173 IKNN-TLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ ++ ++++D G A + A + G+P +MAPE+L G Y+ D ++LGV ++E
Sbjct: 322 LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381
Query: 231 ALFGHAPYAS----CNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYE 286
+ P+ + +L+ + L A P+ SP DF LLQKDP +R+ +
Sbjct: 382 MIAARGPFRARGEKVENKELKQRVLEQA--VTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
Query: 287 D-----LFSHP 292
D L +HP
Sbjct: 440 DGSCDGLRTHP 450
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 17/191 (8%)
Query: 117 IILEYCDGGDLCSFI----RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+++ +GGD+ I + E + + Q+V L+ L + N+ + DLKP+N+L
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL 321
Query: 173 IKNN-TLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ ++ ++++D G A + A + G+P +MAPE+L G Y+ D ++LGV ++E
Sbjct: 322 LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381
Query: 231 ALFGHAPYAS----CNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYE 286
+ P+ + +L+ + L A P+ SP DF LLQKDP +R+ +
Sbjct: 382 MIAARGPFRARGEKVENKELKQRVLEQA--VTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
Query: 287 D-----LFSHP 292
D L +HP
Sbjct: 440 DGSCDGLRTHP 450
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
Y++ E GG + S I +E + V+ + AL FL + H DLKP+NIL ++
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 176 ----NTLKLADFGFAQFLAPNDQGDSIQ--------GSPLYMAPEIL-----AGSPYNAK 218
+ +K+ DFG + N I GS YMAPE++ S Y+ +
Sbjct: 147 PNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 219 ADLWSLGVLVFEALFGHAPY-----ASCNLSQLRA---------QALSSAPITIPPNS-- 262
DLWSLGV+++ L G+ P+ + C + A +++ P
Sbjct: 207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWA 266
Query: 263 -LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+S D +S+LL +D +R+S + HP+
Sbjct: 267 HISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+Y+IL++ GGDL + + +E + ++ +L L L L + + DLKP+NIL+
Sbjct: 105 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLD 164
Query: 174 KNNTLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + + + + S G+ YMAPE++ ++ AD WS GVL+FE L
Sbjct: 165 EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEML 224
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ + + L A + + P LS + L L +++P R+
Sbjct: 225 TGSLPFQGKDRKETMTLIL-KAKLGM-PQFLSTEAQSLLRALFKRNPANRLG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 14/180 (7%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
RY+Y+++EY GGDL + + +++ + E + + ++VLAL + H D+KP N+L
Sbjct: 147 RYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNML 205
Query: 173 I-KNNTLKLADFGFAQFLAPNDQG----DSIQGSPLYMAPEILAGSP----YNAKADLWS 223
+ K+ LKLADFG + N +G D+ G+P Y++PE+L Y + D WS
Sbjct: 206 LDKSGHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 263
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALS-SAPITIP-PNSLSPDCMDFLSRLLQKDPMR 281
+GV ++E L G P+ + +L ++ ++ +T P N +S + + + L +R
Sbjct: 264 VGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVR 323
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 164
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + ++ G+ Y++PE+L +DLW+LG ++++
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 225 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 283 YGPLKAHPF 291
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P + IL+ +GGDL + H SE + + +++L L+ + V + DLKP NI
Sbjct: 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEIL-AGSPYNAKADLWSLGVLVF 229
L+ ++ ++++D G A + S+ G+ YMAPE+L G Y++ AD +SLG ++F
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIP-PNSLSPDCMDFLSRLLQKDPMRRI 283
+ L GH+P+ + + + P+S SP+ L LLQ+D RR+
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 112 PRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
P + IL+ +GGDL + H SE + + +++L L+ + V + DLKP NI
Sbjct: 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEIL-AGSPYNAKADLWSLGVLVF 229
L+ ++ ++++D G A + S+ G+ YMAPE+L G Y++ AD +SLG ++F
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 230 EALFGHAPYASCNLSQLRAQALSSAPITIP-PNSLSPDCMDFLSRLLQKDPMRRI 283
+ L GH+P+ + + + P+S SP+ L LLQ+D RR+
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 437
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 14/180 (7%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
RY+Y+++EY GGDL + + +++ + E + + ++VLAL + H D+KP N+L
Sbjct: 147 RYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNML 205
Query: 173 I-KNNTLKLADFGFAQFLAPNDQG----DSIQGSPLYMAPEILAGSP----YNAKADLWS 223
+ K+ LKLADFG + N +G D+ G+P Y++PE+L Y + D WS
Sbjct: 206 LDKSGHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 263
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALS-SAPITIP-PNSLSPDCMDFLSRLLQKDPMR 281
+GV ++E L G P+ + +L ++ ++ +T P N +S + + + L +R
Sbjct: 264 VGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVR 323
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 14/180 (7%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
RY+Y+++EY GGDL + + +++ + E + + ++VLAL + H D+KP N+L
Sbjct: 142 RYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNML 200
Query: 173 I-KNNTLKLADFGFAQFLAPNDQG----DSIQGSPLYMAPEILAGSP----YNAKADLWS 223
+ K+ LKLADFG + N +G D+ G+P Y++PE+L Y + D WS
Sbjct: 201 LDKSGHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 258
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALS-SAPITIP-PNSLSPDCMDFLSRLLQKDPMR 281
+GV ++E L G P+ + +L ++ ++ +T P N +S + + + L +R
Sbjct: 259 VGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVR 318
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 17/191 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+++ +GGD+ I + ++ E + + Q+V L+ L + N+ + DLKP+N+L
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL 321
Query: 173 IKNN-TLKLADFGFA-QFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ ++ ++++D G A + A + G+P +MAPE+L G Y+ D ++LGV ++E
Sbjct: 322 LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381
Query: 231 ALFGHAPYAS----CNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYE 286
+ P+ + +L+ + L A P+ SP DF LLQKDP +R+ +
Sbjct: 382 MIAARGPFRARGEKVENKELKQRVLEQA--VTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
Query: 287 D-----LFSHP 292
D L +HP
Sbjct: 440 DGSCDGLRTHP 450
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 144 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT---LKLADFGFAQFLAPNDQGD---- 196
+RQ+ AL +L +CH D+KP+N L N +KL DFG ++ + G+
Sbjct: 172 NIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM 231
Query: 197 -SIQGSPLYMAPEIL--AGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSS 253
+ G+P ++APE+L Y K D WS GVL+ L G P+ N + +Q L+
Sbjct: 232 TTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNK 291
Query: 254 APITIPP--NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
P N LSP D LS LL ++ R HP+
Sbjct: 292 KLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 164
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 225 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 283 YGPLKAHPF 291
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 227 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 285 YGPLKAHPF 293
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 164
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 225 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 283 YGPLKAHPF 291
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 227 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 285 YGPLKAHPF 293
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 164
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 225 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 283 YGPLKAHPF 291
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 18/177 (10%)
Query: 114 YVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
++Y++++Y GGDL + + E KL E + ++ ++VLA+ + + + H D+KP N+L
Sbjct: 164 HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVL 223
Query: 173 IK-NNTLKLADFGFAQFLAPNDQGDSIQ-----GSPLYMAPEILAG-----SPYNAKADL 221
+ N ++LADFG L ND G ++Q G+P Y++PEIL Y + D
Sbjct: 224 LDVNGHIRLADFG--SCLKMNDDG-TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDW 280
Query: 222 WSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLL 275
WSLGV ++E L+G P+ + +L + + ++ P+ +S + D + RL+
Sbjct: 281 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 337
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 227 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 285 YGPLKAHPF 293
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 82 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 141
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 142 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 201
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 202 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 259
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 260 YGPLKAHPF 268
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 108 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 167
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 227
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 228 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 285
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 286 YGPLKAHPF 294
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 110 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 169
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 170 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 229
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P + P D + +LL D +R+ E+
Sbjct: 230 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PAAFFPKARDLVEKLLVLDATKRLGCEEMEG 287
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 288 YGPLKAHPF 296
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 18/177 (10%)
Query: 114 YVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
++Y++++Y GGDL + + E KL E + ++ ++VLA+ + + + H D+KP N+L
Sbjct: 148 HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVL 207
Query: 173 IK-NNTLKLADFGFAQFLAPNDQGDSIQ-----GSPLYMAPEILAG-----SPYNAKADL 221
+ N ++LADFG L ND G ++Q G+P Y++PEIL Y + D
Sbjct: 208 LDVNGHIRLADFG--SCLKMNDDG-TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDW 264
Query: 222 WSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPN---SLSPDCMDFLSRLL 275
WSLGV ++E L+G P+ + +L + + ++ P+ +S + D + RL+
Sbjct: 265 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 321
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 83 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 142
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 143 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 202
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 203 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 260
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 261 YGPLKAHPF 269
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y+ILEY GG+L + E ++ ++ +AL L + + + DLKP+NI++
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 175 NNT-LKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + + + G+ YMAPEIL S +N D WSLG L+++ L
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ N + + L + +PP L+ + D L +LL+++ R+
Sbjct: 216 TGAPPFTGENRKKTIDKILKCK-LNLPP-YLTQEARDLLKKLLKRNAASRLG 265
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 84 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 143
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 144 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 203
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 204 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 261
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 262 YGPLKAHPF 270
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 89 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 148
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 149 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 208
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 209 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 266
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 267 YGPLKAHPF 275
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 104 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 163
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 223
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 224 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 281
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 282 YGPLKAHPF 290
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 85 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 144
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 145 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 204
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 205 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 262
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 263 YGPLKAHPF 271
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y L Y G+L +IR E + + ++V AL++L + H DLKP+NIL+
Sbjct: 112 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 171
Query: 175 NNT-LKLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +++ DFG A+ L+P + + G+ Y++PE+L +DLW+LG ++++
Sbjct: 172 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 231
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED--- 287
+ G P+ + N L Q + P P D + +LL D +R+ E+
Sbjct: 232 LVAGLPPFRAGN-EYLIFQKIIKLEYDF-PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 289
Query: 288 ---LFSHPY 293
L +HP+
Sbjct: 290 YGPLKAHPF 298
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 113 RYVYIILEYCDG---GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+Y+ +I+EY L SFIRS + ++ QL A+ F+ +CH D+KPQ
Sbjct: 111 KYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 170 NILI--KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGV 226
N+L+ K+NTLKL DFG A+ L P++ + S Y APE++ G + Y DLWS+G
Sbjct: 171 NLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGC 230
Query: 227 LVFEALFGHAPYAS-CNLSQL-----------RAQALSSAP----ITIP----------- 259
+ E + G ++ ++ QL + Q + P + P
Sbjct: 231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKIL 290
Query: 260 PNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPD 295
P +D L ++L+ +P RI+ + +HP+ D
Sbjct: 291 PEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFD 326
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y+ILEY GG+L + E ++ ++ +AL L + + + DLKP+NI++
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 175 NNT-LKLADFGF-AQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + + G+ YMAPEIL S +N D WSLG L+++ L
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 233 FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
G P+ N + + L + +PP L+ + D L +LL+++ R+
Sbjct: 216 TGAPPFTGENRKKTIDKILKCK-LNLPP-YLTQEARDLLKKLLKRNAASRLG 265
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 16/194 (8%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y+Y+++EY GGDL + + +++ + E + + ++VLAL + + H D+KP N+L
Sbjct: 148 KYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNML 206
Query: 173 I-KNNTLKLADFGFAQFLAPNDQG----DSIQGSPLYMAPEILAGSP----YNAKADLWS 223
+ K+ LKLADFG + ++ G D+ G+P Y++PE+L Y + D WS
Sbjct: 207 LDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 264
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALS-SAPITIPPNS-LSPDCMDFLSRLLQKDPMR 281
+GV +FE L G P+ + +L ++ + + P ++ +S + + L +R
Sbjct: 265 VGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVR 324
Query: 282 --RISYEDLFSHPY 293
R E++ HP+
Sbjct: 325 LGRNGVEEIKQHPF 338
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VYI+ EY + DL + + L E + F+ QL+ LK++ NV H DLKP N+ I
Sbjct: 97 VYIVQEYMET-DLANVLEQGPLLEE-HARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN 154
Query: 175 NN--TLKLADFGFAQFLAPN--DQGDSIQG--SPLYMAPEIL-AGSPYNAKADLWSLGVL 227
LK+ DFG A+ + P+ +G +G + Y +P +L + + Y D+W+ G +
Sbjct: 155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI 214
Query: 228 VFEALFGHAPYASCN-LSQL--------------RAQALSSAPITI---------PPNSL 263
E L G +A + L Q+ R + LS P+ I P L
Sbjct: 215 FAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQL 274
Query: 264 SP----DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P + +DFL ++L PM R++ E+ SHPY + P E
Sbjct: 275 LPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDE 318
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ ++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L + +S G+ YM+PE L G+ Y+ ++D+WS+G+ + E
Sbjct: 139 NSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 233 FGHAPYASCN----------LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G P + + +L ++ P +P S + DF+++ L K+P R
Sbjct: 198 VGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 257
Query: 283 ISYEDLFSHPY 293
+ L H +
Sbjct: 258 ADLKQLMVHAF 268
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 117 IILEYCDGGDLCSFIRSHEK---LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +EYC+GGDL ++ E L E + + + AL++L EN + H DLKP+NI++
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Query: 174 KNN----TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ K+ D G+A+ L + G+ Y+APE+L Y D WS G L F
Sbjct: 156 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 215
Query: 230 EALFGHAPY 238
E + G P+
Sbjct: 216 ECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 117 IILEYCDGGDLCSFIRSHEK---LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +EYC+GGDL ++ E L E + + + AL++L EN + H DLKP+NI++
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Query: 174 KNN----TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVF 229
+ K+ D G+A+ L + G+ Y+APE+L Y D WS G L F
Sbjct: 155 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 214
Query: 230 EALFGHAPY 238
E + G P+
Sbjct: 215 ECITGFRPF 223
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 31/209 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSE-FQC-------QQFVRQLVLALKFL-RENNVCHFD 165
VYII EY + + F L + + C + ++ ++ + ++ E N+CH D
Sbjct: 118 VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRD 177
Query: 166 LKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYN-AKADLW 222
+KP NIL+ KN +KL+DFG ++++ S +G+ +M PE + S YN AK D+W
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIW 236
Query: 223 SLGVLVFEALFGHAPYA-SCNLSQLRAQA-----------------LSSAPITIPPNSLS 264
SLG+ ++ + P++ +L +L L++ T N LS
Sbjct: 237 SLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLS 296
Query: 265 PDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +DFL L+K+P RI+ ED H +
Sbjct: 297 NEDIDFLKLFLRKNPAERITSEDALKHEW 325
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 34/212 (16%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
Y++ E GG + S I +E + V+ + AL FL + H DLKP+NIL ++
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 176 ----NTLKLADFGFAQFLAPNDQGDSIQ--------GSPLYMAPEIL-----AGSPYNAK 218
+ +K+ DF + N I GS YMAPE++ S Y+ +
Sbjct: 147 PNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 219 ADLWSLGVLVFEALFGHAPY-----ASCNLSQLRA---------QALSSAPITIPPNS-- 262
DLWSLGV+++ L G+ P+ + C + A +++ P
Sbjct: 207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWA 266
Query: 263 -LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+S D +S+LL +D +R+S + HP+
Sbjct: 267 HISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEK----LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
I+LE D GDL I+ +K + E ++ QL AL+ + V H D+KP N+
Sbjct: 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVF 168
Query: 173 IK-NNTLKLADFGFAQFLAPNDQG-DSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE 230
I +KL D G +F + S+ G+P YM+PE + + YN K+D+WSLG L++E
Sbjct: 169 ITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 228
Query: 231 ALFGHAPY--ASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
+P+ NL L + +P + S + ++ + DP +R
Sbjct: 229 MAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V I +E +GG L ++ L E + ++ Q + L++L + H D+K N+L+
Sbjct: 159 WVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLL 218
Query: 174 KNNT--LKLADFGFAQFLAPND------QGDSIQGSPLYMAPEILAGSPYNAKADLWSLG 225
++ L DFG A L P+ GD I G+ +MAPE++ G +AK D+WS
Sbjct: 219 SSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSC 278
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKDPMRRI 283
++ L G P+ L + S P IPP S +P + L+K+P+ R+
Sbjct: 279 CMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPP-SCAPLTAQAIQEGLRKEPIHRV 337
Query: 284 SYEDL 288
S +L
Sbjct: 338 SAAEL 342
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-K 174
Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP+N+L+ +
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 175 NNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWSLGVLVFE 230
+ LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS G+++
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 199
Query: 231 ALFGHAPYASCNLSQLRAQALSSAPITIPP-NSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + S + P + + L ++L ++P RI+ D+
Sbjct: 200 MLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V I +E +GG L ++ L E + ++ Q + L++L + H D+K N+L+
Sbjct: 140 WVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLL 199
Query: 174 KNNT--LKLADFGFAQFLAPND------QGDSIQGSPLYMAPEILAGSPYNAKADLWSLG 225
++ L DFG A L P+ GD I G+ +MAPE++ G +AK D+WS
Sbjct: 200 SSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSC 259
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKDPMRRI 283
++ L G P+ L + S P IPP S +P + L+K+P+ R+
Sbjct: 260 CMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPP-SCAPLTAQAIQEGLRKEPIHRV 318
Query: 284 SYEDL 288
S +L
Sbjct: 319 SAAEL 323
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 6/179 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-K 174
Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP+N+L+ +
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 175 NNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWSLGVLVFE 230
+ LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS G+++
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 199
Query: 231 ALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + S Q + P + + L ++L ++P RI+ D+
Sbjct: 200 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253
Query: 283 ISYEDL 288
I+ D+
Sbjct: 254 ITIPDI 259
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 6/179 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-K 174
Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP+N+L+ +
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 175 NNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWSLGVLVFE 230
+ LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS G+++
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 199
Query: 231 ALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + S Q + P + + L ++L ++P RI+ D+
Sbjct: 200 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 252
Query: 283 ISYEDL 288
I+ D+
Sbjct: 253 ITIPDI 258
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 115 VYIILEYCDGGDLCSFIR------SHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDL 166
++++++ GG + I+ H+ L E +R+++ L++L +N H D+
Sbjct: 83 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDV 142
Query: 167 KPQNILI-KNNTLKLADFGFAQFLAP------NDQGDSIQGSPLYMAPEILAG-SPYNAK 218
K NIL+ ++ ++++ADFG + FLA N + G+P +MAPE++ Y+ K
Sbjct: 143 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 202
Query: 219 ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM--------DF 270
AD+WS G+ E G APY ++ L + P ++ + +
Sbjct: 203 ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKM 262
Query: 271 LSRLLQKDPMRRISYEDLFSHPY 293
+S LQKDP +R + +L H +
Sbjct: 263 ISLCLQKDPEKRPTAAELLRHKF 285
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 115 VYIILEYCDGGDLCSFIR------SHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDL 166
++++++ GG + I+ H+ L E +R+++ L++L +N H D+
Sbjct: 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDV 147
Query: 167 KPQNILI-KNNTLKLADFGFAQFLAP------NDQGDSIQGSPLYMAPEILAG-SPYNAK 218
K NIL+ ++ ++++ADFG + FLA N + G+P +MAPE++ Y+ K
Sbjct: 148 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 207
Query: 219 ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM--------DF 270
AD+WS G+ E G APY ++ L + P ++ + +
Sbjct: 208 ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKM 267
Query: 271 LSRLLQKDPMRRISYEDLFSHPY 293
+S LQKDP +R + +L H +
Sbjct: 268 ISLCLQKDPEKRPTAAELLRHKF 290
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 149 LVLALKFLRENN-VCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMA 206
+V AL +L+E + V H D+KP NIL+ + +KL DFG + L + D G YMA
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMA 192
Query: 207 PEIL-----AGSPYNAKADLWSLGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPP 260
PE + Y+ +AD+WSLG+ + E G PY +C ++ + L P +P
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG 252
Query: 261 N-SLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ S D F+ L KD +R Y L H +
Sbjct: 253 HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 14/193 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+Y++++Y GGDL + + E +L E + ++ ++V+A+ + + + H D+KP NIL+
Sbjct: 149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM 208
Query: 174 K-NNTLKLADFGFAQFLAPND--QGDSIQGSPLYMAPEILAGSP-----YNAKADLWSLG 225
N ++LADFG L + Q G+P Y++PEIL Y + D WSLG
Sbjct: 209 DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLG 268
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL--QKDPM 280
V ++E L+G P+ + +L + + ++ P +S + D + RL+ ++ +
Sbjct: 269 VCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRL 328
Query: 281 RRISYEDLFSHPY 293
+ ED HP+
Sbjct: 329 GQNGIEDFKKHPF 341
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253
Query: 283 ISYEDL 288
I+ D+
Sbjct: 254 ITIPDI 259
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253
Query: 283 ISYEDL 288
I+ D+
Sbjct: 254 ITIPDI 259
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253
Query: 283 ISYEDL 288
I+ D+
Sbjct: 254 ITIPDI 259
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 252
Query: 283 ISYEDL 288
I+ D+
Sbjct: 253 ITIPDI 258
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253
Query: 283 ISYEDL 288
I+ D+
Sbjct: 254 ITIPDI 259
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 6/179 (3%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-K 174
Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP+N+L+ +
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 175 NNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWSLGVLVFE 230
+ LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS G+++
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 199
Query: 231 ALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + S Q + P + + L ++L ++P RI+ D+
Sbjct: 200 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 105 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 159 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 214 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 273
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 274 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 328
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 97 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 150
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 151 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 206 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 265
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 266 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 320
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 103 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 156
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 157 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 211
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 212 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 271
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 272 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 326
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 105 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 159 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 214 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 273
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 274 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 328
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 104 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 158 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 272
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 327
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 98 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 152 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 207 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 266
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 267 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 104 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 158 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 272
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 327
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 93/169 (55%), Gaps = 12/169 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILI 173
I+ ++C+G L + + E ++F+ ++ + RQ + +L ++ H DLK NI +
Sbjct: 84 IVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 141
Query: 174 -KNNTLKLADFGFAQF---LAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGV 226
++NT+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+
Sbjct: 142 HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 201
Query: 227 LVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL 275
+++E + G PY++ N + + ++ + + +C + RL+
Sbjct: 202 VLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 250
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 98 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 152 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 207 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 266
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 267 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 321
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 252
Query: 283 ISYEDL 288
I+ D+
Sbjct: 253 ITIPDI 258
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 142 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 196 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 251 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 310
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 311 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 252
Query: 283 ISYEDL 288
I+ D+
Sbjct: 253 ITIPDI 258
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 60/235 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 142 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 196 VVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 251 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 310
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAP 300
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 311 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 131
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 191
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 192 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 251
Query: 283 ISYEDL 288
I+ D+
Sbjct: 252 ITIPDI 257
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 252
Query: 283 ISYEDL 288
I+ D+
Sbjct: 253 ITIPDI 258
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 252
Query: 283 ISYEDL 288
I+ D+
Sbjct: 253 ITIPDI 258
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 252
Query: 283 ISYEDL 288
I+ D+
Sbjct: 253 ITIPDI 258
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 252
Query: 283 ISYEDL 288
I+ D+
Sbjct: 253 ITIPDI 258
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253
Query: 283 ISYEDL 288
I+ D+
Sbjct: 254 ITIPDI 259
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253
Query: 283 ISYEDL 288
I+ D+
Sbjct: 254 ITIPDI 259
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
R+ Y+ LEYC GG+L I + E Q+F QL+ + +L + H D+KP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 169 QNILI-KNNTLKLADFGFAQFLAPNDQG---DSIQGSPLYMAPEILAGSPYNAK-ADLWS 223
+N+L+ + + LK++DFG A N++ + + G+ Y+APE+L ++A+ D+WS
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 224 LGVLVFEALFGHAPYASCNLS-QLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
G+++ L G P+ + S Q + P + + L ++L ++P R
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR 253
Query: 283 ISYEDL 288
I+ D+
Sbjct: 254 ITIPDI 259
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 93/169 (55%), Gaps = 12/169 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILI 173
I+ ++C+G L + + E ++F+ ++ + RQ + +L ++ H DLK NI +
Sbjct: 96 IVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 153
Query: 174 -KNNTLKLADFGFA---QFLAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGV 226
++NT+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+
Sbjct: 154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213
Query: 227 LVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL 275
+++E + G PY++ N + + ++ + + +C + RL+
Sbjct: 214 VLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 137 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK-NNTLKLADFGFAQFLAPNDQG 195
L E Q ++R +LAL L + H D+KP NI + KL DFG L G
Sbjct: 154 LPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213
Query: 196 DSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQLRAQALSSA 254
+ +G P YMAPE+L GS Y AD++SLG+ + E A P+ QLR L
Sbjct: 214 EVQEGDPRYMAPELLQGS-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL--- 269
Query: 255 PITIPPN---SLSPDCMDFLSRLLQKDPMRRISYEDLFSHP 292
PP LS + L +L+ DP R + E L + P
Sbjct: 270 ----PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALP 306
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 93/169 (55%), Gaps = 12/169 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNILI 173
I+ ++C+G L + + E ++F+ ++ + RQ + +L ++ H DLK NI +
Sbjct: 96 IVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 153
Query: 174 -KNNTLKLADFGFA---QFLAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGV 226
++NT+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+
Sbjct: 154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213
Query: 227 LVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL 275
+++E + G PY++ N + + ++ + + +C + RL+
Sbjct: 214 VLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 34/226 (15%)
Query: 57 IRYGELQYDTVQNSQIRLGTVKYSQV--RYDTITSHSEFERPRAGLSNLRAPEGRKRPRY 114
IR+ E + T+ + + L ++ + V Y F +P + K+
Sbjct: 39 IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV---------KKKST 89
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQ--QFVRQLVLALKFLRENNVCHFDLKPQNIL 172
++I +EYC+ G L I S E L++ + + + RQ++ AL ++ + H DLKP NI
Sbjct: 90 LFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIF 148
Query: 173 I-KNNTLKLADFGFAQFL---------------APNDQGDSIQGSPLYMAPEILAGSP-Y 215
I ++ +K+ DFG A+ + +D S G+ +Y+A E+L G+ Y
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 216 NAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPN 261
N K D++SLG++ FE ++ P+++ + L S I PP+
Sbjct: 209 NEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPD 251
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 60/228 (26%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +LC I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 104 VYLVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 158 VVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 272
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPY 293
P+SL P D LS++L DP +RIS +D HPY
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSE-----FQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+Y+++EYC +C + + E Q + QL+ L++L + H D+KP
Sbjct: 83 MYMVMEYC----VCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPG 138
Query: 170 NILI-KNNTLKLADFGFAQFLAP---NDQGDSIQGSPLYMAPEILAG--SPYNAKADLWS 223
N+L+ TLK++ G A+ L P +D + QGSP + PEI G + K D+WS
Sbjct: 139 NLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWS 198
Query: 224 LGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
GV ++ G P+ N+ +L + + I P P D L +L+ +P +R
Sbjct: 199 AGVTLYNITTGLYPFEGDNIYKL-FENIGKGSYAI-PGDCGPPLSDLLKGMLEYEPAKRF 256
Query: 284 SYEDLFSHPYPDLIHAP 300
S + H + H P
Sbjct: 257 SIRQIRQHSWFRKKHPP 273
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 47/265 (17%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+++E D +LC I H +L + + Q++ +K L + H DLKP NI++K
Sbjct: 104 VYLVMELMDA-NLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
++ TLK+ DFG A+ N + Y APE++ G Y A D+WS+G ++ E +
Sbjct: 161 SDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVK 220
Query: 234 G--------HAPYASCNLSQL---RAQALSSAPIT-------------IPPNSLSPDCM- 268
G H + + QL A+ +++ T I L PD +
Sbjct: 221 GCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIF 280
Query: 269 ---------------DFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAESHQTAIRIVT 313
D LS++L DP +RIS ++ HPY + + P AE+ +I
Sbjct: 281 PSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDP-AEAEAPPPQIY- 338
Query: 314 DAIHHDRENNSRRAFSL-YCEALNY 337
DA +RE+ L Y E +++
Sbjct: 339 DAQLEEREHAIEEWKELIYKEVMDW 363
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 11/189 (5%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
R ++++EYC G + H+K L E + + L +L +N+ H D+K
Sbjct: 125 REHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAG 183
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG---SPYNAKADLWSLG 225
NIL+ L KL DFG A +AP + G+P +MAPE++ Y+ K D+WSLG
Sbjct: 184 NILLSEPGLVKLGDFGSASIMAP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 240
Query: 226 VLVFEALFGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
+ E P + N +S L A + +P + S +F+ LQK P R +
Sbjct: 241 ITCIELAERKPPLFNMNAMSALYHIAQNESP-ALQSGHWSEYFRNFVDSCLQKIPQDRPT 299
Query: 285 YEDLFSHPY 293
E L H +
Sbjct: 300 SEVLLKHRF 308
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 44/228 (19%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY+++E D +LC I H +L + + Q++ +K L + H DLKP NI++K
Sbjct: 102 VYLVMELMDA-NLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 158
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
++ TLK+ DFG A+ + N + Y APE++ G Y D+WS+G ++ E +
Sbjct: 159 SDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK 218
Query: 234 GHAPYASCN--------LSQL---RAQALSSAPIT-------------IPPNSLSPDCM- 268
G + + + QL A+ +++ T I L PD +
Sbjct: 219 GSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIF 278
Query: 269 ---------------DFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPC 301
D LS++L DP +RIS ++ HPY + + P
Sbjct: 279 PSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPA 326
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 11/189 (5%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
R ++++EYC G + H+K L E + + L +L +N+ H D+K
Sbjct: 86 REHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAG 144
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG---SPYNAKADLWSLG 225
NIL+ L KL DFG A +AP + G+P +MAPE++ Y+ K D+WSLG
Sbjct: 145 NILLSEPGLVKLGDFGSASIMAP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201
Query: 226 VLVFEALFGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRIS 284
+ E P + N +S L A + +P + S +F+ LQK P R +
Sbjct: 202 ITCIELAERKPPLFNMNAMSALYHIAQNESP-ALQSGHWSEYFRNFVDSCLQKIPQDRPT 260
Query: 285 YEDLFSHPY 293
E L H +
Sbjct: 261 SEVLLKHRF 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 118/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 7 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 55
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII+E+ G+L ++R + +++S
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 172
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 118/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 7 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 55
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII+E+ G+L ++R + +++S
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 172
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 150 VLALKFLREN-NVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAP 207
V AL L+EN + H D+KP NIL+ ++ +KL DFG + L + G YMAP
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAP 194
Query: 208 EILAGSP----YNAKADLWSLGVLVFEALFGHAPYASCN--LSQLRAQALSSAPITIPPN 261
E + S Y+ ++D+WSLG+ ++E G PY N QL Q + P + +
Sbjct: 195 ERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL-TQVVKGDPPQLSNS 253
Query: 262 ---SLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
SP ++F++ L KD +R Y++L HP+
Sbjct: 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPF 288
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 149 LVLALKFLREN-NVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMA 206
+V AL+ L +V H D+KP N+LI +K+ DFG + +L + D G YMA
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMA 177
Query: 207 PE----ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN--LSQLRAQALSSAPITIPP 260
PE L Y+ K+D+WSLG+ + E PY S QL+ +P +P
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP-QLPA 236
Query: 261 NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ S + +DF S+ L+K+ R +Y +L HP+
Sbjct: 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 26 KWEMERTDI----TMKHKLGGG---QYGEVYVGVWKKYSL---TVAVKTLKEDTMEVE-E 74
Query: 93 FERPRAGLSNLRAPEGRK-------RPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQCQ 143
F + A + ++ P + P + YI+ EY G+L ++R + E+++
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPF-YIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 144 QFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSP 202
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAK 192
Query: 203 L---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITI 258
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+ L
Sbjct: 193 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-DLLEKGYRME 251
Query: 259 PPNSLSPDCMDFLSRLLQKDPMRRISYED 287
P P + + + P R S+ +
Sbjct: 252 QPEGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 118/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 8 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 56
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII+E+ G+L ++R + ++++
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 115 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGA 173
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 60/236 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +L I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 104 VYLVMELMDA-NLXQVIQMELDHERMS-----YLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 158 VVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 272
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPC 301
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA 328
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K FQ RQ + +L N+ H D+K NI +
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 167
Query: 176 N-TLKLADFGFAQF---LAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
T+K+ DFG A + + Q + GS L+MAPE++ +P++ ++D++S G+++
Sbjct: 168 GLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL 227
Query: 229 FEALFGHAPYASCN 242
+E + G PY+ N
Sbjct: 228 YELMTGELPYSHIN 241
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 12 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 60
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + +++S
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 177
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 7 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 55
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + +++S
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 172
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 7 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 55
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + +++S
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 172
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 60/236 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +L I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 104 VYLVMELMDA-NLXQVIQMELDHERMS-----YLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 158 VVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 272
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPC 301
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA 328
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 118/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 12 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 60
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII+E+ G+L ++R + ++++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 177
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 60/236 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +L I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 104 VYLVMELMDA-NLXQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 158 VVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 272
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPC 301
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA 328
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 60/236 (25%)
Query: 115 VYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI 171
VY+++E D +L I+ HE++S + Q++ +K L + H DLKP NI
Sbjct: 97 VYLVMELMDA-NLXQVIQMELDHERMS-----YLLYQMLXGIKHLHSAGIIHRDLKPSNI 150
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPEILAGSPYNAKADLWSLG 225
++K++ TLK+ DFG A+ G S +P Y APE++ G Y D+WS+G
Sbjct: 151 VVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 226 VL----------------------VFEALFGHAPYASCNLSQLRAQALSSAP----ITIP 259
+ V E L P L + + P +T P
Sbjct: 206 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 265
Query: 260 ---PNSLSP-----------DCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPC 301
P+SL P D LS++L DP +RIS +D HPY ++ + P
Sbjct: 266 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA 321
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 45/251 (17%)
Query: 102 NLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNV 161
N++ P+ + VYII E DL I S + LS+ Q F+ Q + A+K L +NV
Sbjct: 76 NIQRPDSFENFNEVYIIQELMQT-DLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNV 133
Query: 162 CHFDLKPQNILIKNN-TLKLADFGFAQFL----APNDQGDSIQ-------GSPLYMAPEI 209
H DLKP N+LI +N LK+ DFG A+ + A N + Q + Y APE+
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEV 193
Query: 210 -LAGSPYNAKADLWSLGVLVFE------------------ALFG--HAPYASCNLSQLRA 248
L + Y+ D+WS G ++ E +FG P++ +L + +
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Query: 249 ----------QALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIH 298
+AP+ ++P +D L R+L DP +RI+ ++ HPY H
Sbjct: 254 PRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313
Query: 299 APCAESHQTAI 309
P E I
Sbjct: 314 DPNDEPEGEPI 324
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 45/251 (17%)
Query: 102 NLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNV 161
N++ P+ + VYII E DL I S + LS+ Q F+ Q + A+K L +NV
Sbjct: 76 NIQRPDSFENFNEVYIIQELMQT-DLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNV 133
Query: 162 CHFDLKPQNILIKNN-TLKLADFGFAQFL----APNDQGDSIQ-------GSPLYMAPEI 209
H DLKP N+LI +N LK+ DFG A+ + A N + Q + Y APE+
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEV 193
Query: 210 -LAGSPYNAKADLWSLGVLVFE------------------ALFG--HAPYASCNLSQLRA 248
L + Y+ D+WS G ++ E +FG P++ +L + +
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Query: 249 ----------QALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIH 298
+AP+ ++P +D L R+L DP +RI+ ++ HPY H
Sbjct: 254 PRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313
Query: 299 APCAESHQTAI 309
P E I
Sbjct: 314 DPNDEPEGEPI 324
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V I +E +GG L I+ L E + ++ Q + L++L + H D+K N+L+
Sbjct: 124 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 183
Query: 174 KNNTLK--LADFGFAQFLAPND------QGDSIQGSPLYMAPEILAGSPYNAKADLWSLG 225
++ + L DFG A L P+ GD I G+ +MAPE++ G P +AK D+WS
Sbjct: 184 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 243
Query: 226 VLVFEALFGHAPY 238
++ L G P+
Sbjct: 244 CMMLHMLNGCHPW 256
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 45/251 (17%)
Query: 102 NLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNV 161
N++ P+ + VYII E DL I S + LS+ Q F+ Q + A+K L +NV
Sbjct: 76 NIQRPDSFENFNEVYIIQELMQT-DLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNV 133
Query: 162 CHFDLKPQNILIKNN-TLKLADFGFAQFL----APNDQGDSIQ-------GSPLYMAPEI 209
H DLKP N+LI +N LK+ DFG A+ + A N + Q + Y APE+
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEV 193
Query: 210 -LAGSPYNAKADLWSLGVLVFE------------------ALFG--HAPYASCNLSQLRA 248
L + Y+ D+WS G ++ E +FG P++ +L + +
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Query: 249 ----------QALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIH 298
+AP+ ++P +D L R+L DP +RI+ ++ HPY H
Sbjct: 254 PRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313
Query: 299 APCAESHQTAI 309
P E I
Sbjct: 314 DPNDEPEGEPI 324
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 61/253 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +L I+ HE++S + Q+++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQMELDHERMS-----YLLYQMLVGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN--------LSQL---------RAQAL 251
++ G Y D+WS+GV++ E + G + + + QL + Q
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 252 SSAPITIPPN-------SLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
+ P L PD + D LS++L D +RIS ++
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 289 FSHPYPDLIHAPC 301
HPY ++ + P
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 176
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG A+ L + + + +G + + +PE +A + + +D+WS
Sbjct: 177 NILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 237 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
Query: 284 SYEDLFS 290
+E + S
Sbjct: 296 KFEQIVS 302
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V I +E +GG L I+ L E + ++ Q + L++L + H D+K N+L+
Sbjct: 140 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 199
Query: 174 KNNTLK--LADFGFAQFLAPND------QGDSIQGSPLYMAPEILAGSPYNAKADLWSLG 225
++ + L DFG A L P+ GD I G+ +MAPE++ G P +AK D+WS
Sbjct: 200 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 259
Query: 226 VLVFEALFGHAPY 238
++ L G P+
Sbjct: 260 CMMLHMLNGCHPW 272
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 49/227 (21%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ +++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 89 ISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV 148
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L + +S G+ YMAPE L G+ Y+ ++D+WS+G+ + E
Sbjct: 149 NSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELA 207
Query: 233 FGHAPYASCNLSQLRA------------------------------QALSSAP------- 255
G P + +L A + S P
Sbjct: 208 VGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFEL 267
Query: 256 ----ITIPPNSL-----SPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ PP L +PD +F+++ L K+P R + L +H +
Sbjct: 268 LDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLTNHTF 314
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 12 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 60
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGA 177
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 34/226 (15%)
Query: 57 IRYGELQYDTVQNSQIRLGTVKYSQV--RYDTITSHSEFERPRAGLSNLRAPEGRKRPRY 114
IR+ E + T+ + + L ++ + V Y F +P + K+
Sbjct: 39 IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV---------KKKST 89
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQ--QFVRQLVLALKFLRENNVCHFDLKPQNIL 172
++I +EYC+ L I S E L++ + + + RQ++ AL ++ + H DLKP NI
Sbjct: 90 LFIQMEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIF 148
Query: 173 I-KNNTLKLADFGFAQFL---------------APNDQGDSIQGSPLYMAPEILAGSP-Y 215
I ++ +K+ DFG A+ + +D S G+ +Y+A E+L G+ Y
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 216 NAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPN 261
N K D++SLG++ FE ++ P+++ + L S I PP+
Sbjct: 209 NEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPD 251
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+V I +E +GG L I+ L E + ++ Q + L++L + H D+K N+L+
Sbjct: 138 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 197
Query: 174 KNNTLK--LADFGFAQFLAPND------QGDSIQGSPLYMAPEILAGSPYNAKADLWSLG 225
++ + L DFG A L P+ GD I G+ +MAPE++ G P +AK D+WS
Sbjct: 198 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 257
Query: 226 VLVFEALFGHAPY 238
++ L G P+
Sbjct: 258 CMMLHMLNGCHPW 270
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 61/253 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +L I+ HE++S + Q+++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQMELDHERMS-----YLLYQMLVGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN--------LSQL---------RAQAL 251
++ G Y D+WS+GV++ E + G + + + QL + Q
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 252 SSAPITIPPN-------SLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
+ P L PD + D LS++L D +RIS ++
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 289 FSHPYPDLIHAPC 301
HPY ++ + P
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 5 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 53
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII+E+ G+L ++R + +++S
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 112 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGA 170
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY + SQ+
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 9 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEV-EE 57
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 174
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 9 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 57
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGA 174
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 8 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 56
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 115 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGA 173
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 222
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 12 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 60
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 177
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 133/334 (39%), Gaps = 85/334 (25%)
Query: 45 GTVRYDIVGSSTIR-YGELQ-----YDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRA 98
G Y IV S R GE+ +D QNS T + + +T S E
Sbjct: 18 GKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMI----LTELSGHENIVN 73
Query: 99 GLSNLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRE 158
L+ LRA R VY++ +Y + DL + IR++ L Q V QL+ +K+L
Sbjct: 74 LLNVLRADNDRD----VYLVFDYMET-DLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHS 127
Query: 159 NNVCHFDLKPQNILIKNNT-LKLADFGFAQF------------LAPNDQGDSIQ------ 199
+ H D+KP NIL+ +K+ADFG ++ L+ N+ ++
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 200 ----GSPLYMAPEILAGS-PYNAKADLWSLGVLVFEALFG-------------------- 234
+ Y APEIL GS Y D+WSLG ++ E L G
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVI 247
Query: 235 -----------HAPYASCNLSQLRAQA-------------LSSAPITIPPNS-LSPDCMD 269
+P+A + L+ + + + I P + + + +D
Sbjct: 248 DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALD 307
Query: 270 FLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
L +LLQ +P +RIS D HP+ + H P E
Sbjct: 308 LLDKLLQFNPNKRISANDALKHPFVSIFHNPNEE 341
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 12 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 60
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 177
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 7 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 55
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 172
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 7 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEV-EE 55
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 172
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 11 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 59
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 60 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 118 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 176
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 225
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 9 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 57
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 174
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 61/252 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +LC I+ HE++S + Q++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN----LSQLRAQALSSAPITIPP---- 260
++ G Y D+WS+G ++ E + G + + +++ Q + +P +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 261 ----------------NSLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
L PD + D LS++L D +RIS ++
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 289 FSHPYPDLIHAP 300
HPY ++ + P
Sbjct: 316 LQHPYINVWYDP 327
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 20 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 68
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 127 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 185
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 186 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 234
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 176
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 237 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
Query: 284 SYEDLFS 290
+E + S
Sbjct: 296 KFEQIVS 302
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 61/252 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +LC I+ HE++S + Q++ +K
Sbjct: 88 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIK 141
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 196
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP-------- 260
++ G Y D+WS+G ++ E + G + + + + P
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 256
Query: 261 ----------------NSLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
L PD + D LS++L D +RIS ++
Sbjct: 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316
Query: 289 FSHPYPDLIHAP 300
HPY ++ + P
Sbjct: 317 LQHPYINVWYDP 328
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
R R I+ EY + G L +F+R+H+ + + Q +R + +++L + H DL +
Sbjct: 121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAAR 180
Query: 170 NILIKNNTL-KLADFGFAQFLAPN-DQGDSIQGSPL---YMAPEILAGSPYNAKADLWSL 224
N+L+ +N + K++DFG ++ L + D + G + + APE +A +++ +D+WS
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
Query: 225 GVLVFEAL-FGHAPY 238
GV+++E L +G PY
Sbjct: 241 GVVMWEVLAYGERPY 255
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 115 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 174
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 175 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 234
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 235 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 293
Query: 284 SYEDLFS 290
+E + S
Sbjct: 294 KFEQIVS 300
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 61/252 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +LC I+ HE++S + Q++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP-------- 260
++ G Y D+WS+G ++ E + G + + + + P
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 261 ----------------NSLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
L PD + D LS++L D +RIS ++
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 289 FSHPYPDLIHAP 300
HPY ++ + P
Sbjct: 316 LQHPYINVWYDP 327
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 214 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 262
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + +++S
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVSAVVL 320
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H +L +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 321 LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 379
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 428
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 79/173 (45%), Gaps = 28/173 (16%)
Query: 148 QLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMA 206
QL+ L FL + V H DLKPQNIL+ ++ +KLADFG A+ + S+ + Y A
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 207 PEILAGSPYNAKADLWSLGVLVFEALFGHAPY--ASCNLSQL----------------RA 248
PE+L S Y DLWS+G +F +F P S ++ QL R
Sbjct: 188 PEVLLQSSYATPVDLWSVGC-IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 249 QAL--------SSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
AL S+ PI + D L + L +P +RIS SHPY
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 79/173 (45%), Gaps = 28/173 (16%)
Query: 148 QLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMA 206
QL+ L FL + V H DLKPQNIL+ ++ +KLADFG A+ + S+ + Y A
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 207 PEILAGSPYNAKADLWSLGVLVFEALFGHAPY--ASCNLSQL----------------RA 248
PE+L S Y DLWS+G +F +F P S ++ QL R
Sbjct: 188 PEVLLQSSYATPVDLWSVGC-IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 249 QAL--------SSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
AL S+ PI + D L + L +P +RIS SHPY
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAAR 176
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 237 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
Query: 284 SYEDLFS 290
+E + S
Sbjct: 296 KFEQIVS 302
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 84 YDTITSHSEFERPRAGLSNLRAPEGRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQ 141
YD TS E N + R + + ++I +E+CD G L +I R EKL +
Sbjct: 79 YDPETSDDSLESSDYDPENSKNS-SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 137
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKNNTLKLADFGFAQFLAPNDQGDSIQG 200
+ Q+ + ++ + H DLKP NI L+ +K+ DFG L + + +G
Sbjct: 138 ALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKG 197
Query: 201 SPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP 260
+ YM+PE ++ Y + DL++LG+++ E L H C+ + ++ + I
Sbjct: 198 TLRYMSPEQISSQDYGKEVDLYALGLILAELL--HV----CDTAFETSKFFTDLRDGIIS 251
Query: 261 NSLSPDCMDFLSRLLQKDPMRR 282
+ L +LL K P R
Sbjct: 252 DIFDKKEKTLLQKLLSKKPEDR 273
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 105 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 164
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 165 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 224
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 225 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 283
Query: 284 SYEDLFS 290
+E + S
Sbjct: 284 KFEQIVS 290
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 88 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 147
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 148 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 207
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 208 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 266
Query: 284 SYEDLFS 290
+E + S
Sbjct: 267 KFEQIVS 273
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 176
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 237 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
Query: 284 SYEDLFS 290
+E + S
Sbjct: 296 KFEQIVS 302
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 176
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 237 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
Query: 284 SYEDLFS 290
+E + S
Sbjct: 296 KFEQIVS 302
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 61/252 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +LC I+ HE++S + Q++ +K
Sbjct: 89 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIK 142
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S P Y APE
Sbjct: 143 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMVPFVVTRYYRAPE 197
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP-------- 260
++ G Y D+WS+G ++ E + G + + + + P
Sbjct: 198 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 257
Query: 261 ----------------NSLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
L PD + D LS++L D +RIS ++
Sbjct: 258 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 317
Query: 289 FSHPYPDLIHAP 300
HPY ++ + P
Sbjct: 318 LQHPYINVWYDP 329
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 145 FVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQ-FLAPNDQGDSIQGSP 202
F QL+ L F EN + H DLKPQN+LI K LKL DFG A+ F P + S +
Sbjct: 113 FQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 203 LYMAPEILAGS-PYNAKADLWSLGVLVFEALFGHAPYASCN-LSQLRA---------QAL 251
Y AP++L GS Y+ D+WS G ++ E + G + N QL+ ++L
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232
Query: 252 SSAPITIP-------------------PNSLSP---DCMDFLSRLLQKDPMRRISYEDLF 289
+ +P P++ P + MDFL LLQ +P R+S +
Sbjct: 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292
Query: 290 SHPY 293
HP+
Sbjct: 293 HHPW 296
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 176
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 237 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
Query: 284 SYEDLFS 290
+E + S
Sbjct: 296 KFEQIVS 302
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 176
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG + L + + + +G + + +PE +A + + +D+WS
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 237 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
Query: 284 SYEDLFS 290
+E + S
Sbjct: 296 KFEQIVS 302
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
N+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 145 SSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 204
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 205 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 61/252 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +LC I+ HE++S + Q++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSP-----LYMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPEVVTRYYRAPE 195
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPP-------- 260
++ G Y D+WS+G ++ E + G + + + + P
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 261 ----------------NSLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
L PD + D LS++L D +RIS ++
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEA 315
Query: 289 FSHPYPDLIHAP 300
HPY ++ + P
Sbjct: 316 LQHPYINVWYDP 327
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 149 LVLALKFLREN-NVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMA 206
+V AL+ L +V H D+KP N+LI +K+ DFG + +L + G YMA
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMA 221
Query: 207 PE----ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN--LSQLRAQALSSAPITIPP 260
PE L Y+ K+D+WSLG+ + E PY S QL+ +P +P
Sbjct: 222 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP-QLPA 280
Query: 261 NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ S + +DF S+ L+K+ R +Y +L HP+
Sbjct: 281 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 79/173 (45%), Gaps = 28/173 (16%)
Query: 148 QLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMA 206
QL+ L FL + V H DLKPQNIL+ ++ +KLADFG A+ + S+ + Y A
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 207 PEILAGSPYNAKADLWSLGVLVFEALFGHAPY--ASCNLSQL----------------RA 248
PE+L S Y DLWS+G +F +F P S ++ QL R
Sbjct: 188 PEVLLQSSYATPVDLWSVGC-IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 249 QAL--------SSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
AL S+ PI + D L + L +P +RIS SHPY
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
R R I+ EY + G L +F+R+H+ + + Q +R + +++L + H DL +
Sbjct: 121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAAR 180
Query: 170 NILIKNNTL-KLADFGFAQFLAPN-DQGDSIQGSPL---YMAPEILAGSPYNAKADLWSL 224
N+L+ +N + K++DFG ++ L + D + G + + APE +A +++ +D+WS
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
Query: 225 GVLVFEAL-FGHAPY 238
GV+++E L +G PY
Sbjct: 241 GVVMWEVLAYGERPY 255
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 108 GRKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
GRK + I++E DGG+L S I R + +E + + ++ + A+++L N+ H D
Sbjct: 86 GRK---CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 166 LKPQNILIK----NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADL 221
+KP+N+L N LKL DFGFA+ G Y+ D+
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETT---------------------GEKYDKSCDM 181
Query: 222 WSLGVLVFEALFGHAPYASCN---LSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLL 275
WSLGV+++ L G+ P+ S + +S + P + +S + + LL
Sbjct: 182 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 241
Query: 276 QKDPMRRISYEDLFSHPY 293
+ +P +R++ + +HP+
Sbjct: 242 KTEPTQRMTITEFMNHPW 259
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 91 SEFERPRAGLSNLRAPE------GRKRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQ 141
+EF R A + LR P +P + I+ EY G L + + E+L E +
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 142 CQQFVRQLVLALKFLRENN--VCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND-QGDS 197
+ + +L N + H +LK N+L+ K T+K+ DFG ++ A S
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 198 IQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQ-ALSSAPI 256
G+P +MAPE+L P N K+D++S GV+++E P+ + N +Q+ A +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL 258
Query: 257 TIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
IP N L+P + +P +R S+ +
Sbjct: 259 EIPRN-LNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 116/229 (50%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 5 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-E 53
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + +++S
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H DL +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 112 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGA 170
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY + SQ+
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 105 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
Query: 234 GHAP--YASCNLSQLR--AQALSSAPITIPPNS--------------------------- 262
P Y N QL A+ L + + + N
Sbjct: 222 RKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 281
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAESHQT 307
+SP+ +DFL +LL+ D R++ + +HPY + A AE+ +T
Sbjct: 282 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRA--AENSRT 329
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 88 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 147
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
N+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 148 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 207
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 208 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 106 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 163 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 222
Query: 234 GHAP--YASCNLSQLR--AQALSSAPITIPPNS--------------------------- 262
P Y N QL A+ L + + + N
Sbjct: 223 RKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 282
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAESHQT 307
+SP+ +DFL +LL+ D R++ + +HPY + A AE+ +T
Sbjct: 283 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRA--AENSRT 330
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 113 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 172
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
N+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 173 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 232
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 233 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 98/186 (52%), Gaps = 19/186 (10%)
Query: 76 TVKYSQVRYDTITSHSEFERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDL 127
TV ++ DT+ EF + A + ++ P R+ P YII E+ G+L
Sbjct: 38 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNL 94
Query: 128 CSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFG 184
++R + +++S Q+ A+++L + N H DL +N L+ +N+ +K+ADFG
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 154
Query: 185 FAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYAS 240
++ + D + G+ + APE LA + ++ K+D+W+ GVL++E A +G +PY
Sbjct: 155 LSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
Query: 241 CNLSQL 246
+ SQ+
Sbjct: 214 IDPSQV 219
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 149
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
N+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 150 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 209
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 210 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 87 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 146
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
N+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 147 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 206
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 207 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 107 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 163
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 164 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 223
Query: 234 GHAP--YASCNLSQLR--AQALSSAPITIPPNS--------------------------- 262
P Y N QL A+ L + + + N
Sbjct: 224 RKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 283
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAESHQT 307
+SP+ +DFL +LL+ D R++ + +HPY + A AE+ +T
Sbjct: 284 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRA--AENSRT 331
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 126 DLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--KNNTLKLADF 183
DL +I L E + F Q+V A++ V H D+K +NILI + KL DF
Sbjct: 125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDF 184
Query: 184 GFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNA-KADLWSLGVLVFEALFGHAPYASCN 242
G L D G+ +Y PE ++ Y+A A +WSLG+L+++ + G P+
Sbjct: 185 GSGALLHDEPYTD-FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE--- 240
Query: 243 LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
R Q + A + P + +SPDC + R L P R S E++ P+
Sbjct: 241 ----RDQEILEAELHFPAH-VSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
N+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 145 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 204
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 205 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
N+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 145 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 204
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 205 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 106 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 163 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 222
Query: 234 GHAP--YASCNLSQLR--AQALSSAPITIPPNS--------------------------- 262
P Y N QL A+ L + + + N
Sbjct: 223 RKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 282
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAESHQT 307
+SP+ +DFL +LL+ D R++ + +HPY + A AE+ +T
Sbjct: 283 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRA--AENSRT 330
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
N+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 525 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 585 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 141
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
N+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 142 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 201
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 202 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 211 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEV-EE 259
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 317
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H +L +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 318 LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 376
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 377 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 425
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 13/212 (6%)
Query: 91 SEFERPRAGLSNLRAPE------GRKRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQ 141
+EF R A + LR P +P + I+ EY G L + + E+L E +
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 142 CQQFVRQLVLALKFLRENN--VCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND-QGDS 197
+ + +L N + H DLK N+L+ K T+K+ DFG ++ A
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 198 IQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPIT 257
G+P +MAPE+L P N K+D++S GV+++E P+ + N +Q+ A
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL 258
Query: 258 IPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
P +L+P + +P +R S+ +
Sbjct: 259 EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 20/178 (11%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V I+ E+ + G L SF+R ++ + + Q +R + +++L E + H DL +NIL+
Sbjct: 92 VMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILV 151
Query: 174 KNNTL-KLADFGFAQFLAPNDQGDSIQGSPL-------YMAPEILAGSPYNAKADLWSLG 225
+N + K++DFG ++FL N D + S L + APE +A + + +D WS G
Sbjct: 152 NSNLVCKVSDFGLSRFLEENSS-DPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYG 210
Query: 226 VLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL----QKD 278
++++E + FG PY ++S +PP PDC L +L+ QKD
Sbjct: 211 IVMWEVMSFGERPY--WDMSNQDVINAIEQDYRLPP---PPDCPTSLHQLMLDCWQKD 263
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 126 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 182
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 183 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 242
Query: 234 GHAP--YASCNLSQLRAQA-----------LSSAPITIPP-------------------- 260
P Y N QL A L+ I + P
Sbjct: 243 RKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 302
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAESHQT 307
+ +SP+ +DFL +LL+ D R++ + +HPY + A AE+ +T
Sbjct: 303 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRA--AENSRT 350
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 105 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
Query: 234 GHAP--YASCNLSQLR--AQALSSAPITIPPNS--------------------------- 262
P Y N QL A+ L + + + N
Sbjct: 222 RKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 281
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+SP+ +DFL +LL+ D R++ + +HPY
Sbjct: 282 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 105 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
Query: 234 GHAP--YASCNLSQLR--AQALSSAPITIPPNS--------------------------- 262
P Y N QL A+ L + + + N
Sbjct: 222 RKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 281
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+SP+ +DFL +LL+ D R++ + +HPY
Sbjct: 282 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 117/229 (51%), Gaps = 29/229 (12%)
Query: 33 RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTVQNSQIRLGTVKYSQVRYDTITSHSE 92
++ R+D T+++ + G +YGE+ + + TV ++ DT+ E
Sbjct: 253 KWEMERTDI----TMKHKLGGG---QYGEVYEGVWKKYSL---TVAVKTLKEDTMEV-EE 301
Query: 93 FERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIR--SHEKLSEFQC 142
F + A + ++ P R+ P YII E+ G+L ++R + ++++
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGS 201
Q+ A+++L + N H +L +N L+ +N+ +K+ADFG ++ + D + G+
Sbjct: 360 LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGA 418
Query: 202 PL---YMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQL 246
+ APE LA + ++ K+D+W+ GVL++E A +G +PY +LSQ+
Sbjct: 419 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 467
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 105 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
Query: 234 GHAP--YASCNLSQLR--AQALSSAPITIPPNS--------------------------- 262
P Y N QL A+ L + + + N
Sbjct: 222 RKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 281
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+SP+ +DFL +LL+ D R++ + +HPY
Sbjct: 282 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 105 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
Query: 234 GHAP--YASCNLSQLR--AQALSSAPITIPPNS--------------------------- 262
P Y N QL A+ L + + + N
Sbjct: 222 RKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 281
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+SP+ +DFL +LL+ D R++ + +HPY
Sbjct: 282 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 61/253 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +L I+ HE++S + Q+++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQMELDHERMS-----YLLYQMLVGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN----LSQLRAQALSSAPITIPP---- 260
++ G Y D+WS+G ++ E + G + + +++ Q + +P +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 261 ----------------NSLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
L PD + D LS++L D +RIS ++
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 289 FSHPYPDLIHAPC 301
HPY ++ + P
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 107/252 (42%), Gaps = 61/252 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +LC I+ HE++S + Q++ +K
Sbjct: 81 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIK 134
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 189
Query: 209 ILAGSPYNAKADLWSLGVLVFEA-----LFGHAPY------------ASCNLSQLRAQAL 251
++ G Y DLWS+G ++ E LF Y C + Q
Sbjct: 190 VILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 249
Query: 252 SSAPITIPPN-------SLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
+ P L PD + D LS++L D +RIS ++
Sbjct: 250 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 309
Query: 289 FSHPYPDLIHAP 300
HPY ++ + P
Sbjct: 310 LQHPYINVWYDP 321
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 124 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLAD 182
G DL + ++S + LS+ Q V QL+ LK++ + H DLKP N+ + ++ L++ D
Sbjct: 116 GADLNNIVKS-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILD 174
Query: 183 FGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEALFGHAPYASC 241
FG A+ +++ + Y APEI L YN D+WS+G ++ E L G A +
Sbjct: 175 FGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
Query: 242 N-------------------LSQLRAQALSSAPITIPP----------NSLSPDCMDFLS 272
+ L+++ ++ + ++PP +P +D L
Sbjct: 233 DYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLG 292
Query: 273 RLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
R+L D +R+S + +H Y H P E
Sbjct: 293 RMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 323
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 45/215 (20%)
Query: 117 IILEYCDGGDLCSFIRS-HEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-K 174
++ EY D DL ++ ++ + F+ QL+ L + V H DLKPQN+LI +
Sbjct: 77 LVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE 135
Query: 175 NNTLKLADFGFAQFLA-PNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFE-- 230
LKLADFG A+ + P D+ + Y P+IL GS Y+ + D+W +G + +E
Sbjct: 136 RGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMA 195
Query: 231 -------------------------------ALFGHAPYASCNLSQLRAQA-LSSAPITI 258
+ + + + N + RA+A LS AP
Sbjct: 196 TGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAP--- 252
Query: 259 PPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
L D D L++LLQ + RIS ED HP+
Sbjct: 253 ---RLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
R VYI+ + + DL ++S + ++ C F+ Q++ LK++ NV H DLKP N+L
Sbjct: 119 RDVYIVQDLMET-DLYKLLKSQQLSNDHICY-FLYQILRGLKYIHSANVLHRDLKPSNLL 176
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YNAKADLWSLGV 226
I LK+ DFG A+ P + Y APEI+ S Y D+WS+G
Sbjct: 177 INTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGC 236
Query: 227 LVFEALFGHAPYA-----------------------SCNLSQLRAQALSSAP-------I 256
++ E L + +C ++ L S P
Sbjct: 237 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWA 296
Query: 257 TIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+ P S S +D L R+L +P +RI+ E+ +HPY + + P E
Sbjct: 297 KLFPKSDS-KALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDE 342
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN 176
+I EY + D F + L+++ + ++ +L+ AL + + H D+KP N++I +
Sbjct: 105 LIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 177 --TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG + +F
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
Query: 234 GHAP--YASCNLSQLR--AQALSSAPITIPPNS--------------------------- 262
P Y N QL A+ L + + + N
Sbjct: 222 RKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA 281
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+SP+ +DFL +LL+ D R++ + +HPY
Sbjct: 282 DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 107 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 166
Query: 176 N-TLKLADFGFAQF---LAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 167 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 226
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 227 YELMTGQLPYSNIN 240
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 107/252 (42%), Gaps = 61/252 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +LC I+ HE++S + Q++ +K
Sbjct: 92 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIK 145
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 146 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 200
Query: 209 ILAGSPYNAKADLWSLGVLVFEA-----LFGHAPY------------ASCNLSQLRAQAL 251
++ G Y DLWS+G ++ E LF Y C + Q
Sbjct: 201 VILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 260
Query: 252 SSAPITIPPN-------SLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
+ P L PD + D LS++L D +RIS ++
Sbjct: 261 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 320
Query: 289 FSHPYPDLIHAP 300
HPY ++ + P
Sbjct: 321 LQHPYINVWYDP 332
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 167
Query: 176 N-TLKLADFGFAQF---LAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 168 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 227
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 228 YELMTGQLPYSNIN 241
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK--------------LSEFQCQQFVRQLVLALKFLRENN 160
+ +I+E+C G+L +++RS L C F Q+ ++FL
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF--QVAKGMEFLASRK 164
Query: 161 VCHFDLKPQNILI-KNNTLKLADFGFAQ--FLAPNDQGDSIQGSPL-YMAPEILAGSPYN 216
H DL +NIL+ + N +K+ DFG A+ + P+ PL +MAPE + Y
Sbjct: 165 XIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 224
Query: 217 AKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL 275
++D+WS GVL++E G +PY + + + L P+ +P+ +
Sbjct: 225 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW 284
Query: 276 QKDPMRRISYEDLFSH 291
+P +R ++ +L H
Sbjct: 285 HGEPSQRPTFSELVEH 300
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ ++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 141 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 200
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L + +S G+ YM+PE L G+ Y+ ++D+WS+G+ + E
Sbjct: 201 NSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 259
Query: 233 FGHAPYASCNLSQLR 247
G P + +L
Sbjct: 260 VGRYPIPPPDAKELE 274
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ EY + D F + ++ L++F + ++ +L+ AL + + H D+KP N++I +
Sbjct: 117 LVFEYINNTD---FKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 174 QKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 233
Query: 234 GHAPY--ASCNLSQLRAQA-----------LSSAPITIPPNS------------------ 262
P+ N QL A L I + P+
Sbjct: 234 RREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHS 293
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+SP+ +D L +LL+ D +R++ ++ HPY
Sbjct: 294 ENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 329
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 149 LVLALKFLREN-NVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMA 206
+V AL+ L +V H D+KP N+LI +K DFG + +L + D G Y A
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXA 204
Query: 207 PE----ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN--LSQLRAQALSSAPITIPP 260
PE L Y+ K+D+WSLG+ E PY S QL+ +P +P
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSP-QLPA 263
Query: 261 NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ S + +DF S+ L+K+ R +Y +L HP+
Sbjct: 264 DKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 51/247 (20%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +LC I+ HE++S + Q++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
L + H DLKP NI++K++ TLK+ DFG A+ + + + Y APE++ G
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 214 PYNAKADLWSLGVLVFEA-----LFGHAPY------------ASCNLSQLRAQALSSAPI 256
Y DLWS+G ++ E LF Y C + Q +
Sbjct: 201 GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 260
Query: 257 TIPPN-------SLSPDCM----------------DFLSRLLQKDPMRRISYEDLFSHPY 293
P L PD + D LS++L D +RIS ++ HPY
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 294 PDLIHAP 300
++ + P
Sbjct: 321 INVWYDP 327
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 18/177 (10%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V I+ E+ + G L SF+R ++ + + Q +R + +++L E + H DL +NIL+
Sbjct: 90 VMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILV 149
Query: 174 KNNTL-KLADFGFAQFLAPNDQGDSIQGS-----PL-YMAPEILAGSPYNAKADLWSLGV 226
+N + K++DFG ++FL N + S P+ + APE +A + + +D WS G+
Sbjct: 150 NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGI 209
Query: 227 LVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL----QKD 278
+++E + FG PY ++S +PP PDC L +L+ QKD
Sbjct: 210 VMWEVMSFGERPY--WDMSNQDVINAIEQDYRLPP---PPDCPTSLHQLMLDCWQKD 261
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ EY + D F + ++ L++F + ++ +L+ AL + + H D+KP N++I +
Sbjct: 112 LVFEYINNTD---FKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 169 QKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 228
Query: 234 GHAPY--ASCNLSQLRAQA-----------LSSAPITIPPNS------------------ 262
P+ N QL A L I + P+
Sbjct: 229 RREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHS 288
Query: 263 -----LSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+SP+ +D L +LL+ D +R++ ++ HPY
Sbjct: 289 ENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+K+ R+ Y++ E+ D L L Q+++ Q++ + F +N+ H D+KP
Sbjct: 94 KKKKRW-YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKP 152
Query: 169 QNILI-KNNTLKLADFGFAQFL-APNDQGDSIQGSPLYMAPEILAGS-PYNAKADLWSLG 225
+NIL+ ++ +KL DFGFA+ L AP + D + Y APE+L G Y D+W++G
Sbjct: 153 ENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIG 212
Query: 226 VLVFEALFGHAPY-ASCNLSQL 246
LV E G + ++ QL
Sbjct: 213 CLVTEMFMGEPLFPGDSDIDQL 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 82 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 141
Query: 176 N-TLKLADFGFAQF---LAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 142 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 201
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 202 YELMTGQLPYSNIN 215
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VY++ + G DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 110 IRAPTIEQM-KDVYLV-THLMGADLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 166
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 167 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 227 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 286
Query: 254 API--TIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 287 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 342
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 117/277 (42%), Gaps = 47/277 (16%)
Query: 64 YDTVQNSQIRLGTVK-YSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRPRYVYIILEYC 122
+D V N++ L +K ++D I + + RP ++ VY++L+
Sbjct: 91 FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS---------VYVVLDLM 141
Query: 123 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 181
+ DL I S + L+ + F+ QL+ LK++ V H DLKP N+L+ N LK+
Sbjct: 142 ES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG 200
Query: 182 DFGFAQFL--APNDQG---DSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEALFGH 235
DFG A+ L +P + + Y APE+ L+ Y DLWS+G + E L
Sbjct: 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
Query: 236 APYASCN-LSQLR-------------AQALSSAPI-----TIPPNSLSP----------D 266
+ N + QL+ QA+ + + ++PP P
Sbjct: 261 QLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQ 320
Query: 267 CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+ L R+L+ +P RIS HP+ H P E
Sbjct: 321 ALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDE 357
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 144
Query: 176 N-TLKLADFGFAQF---LAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 145 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 205 YELMTGQLPYSNIN 218
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNI 171
+ II EY + G L F+R EK EF Q V R + +K+L N H DL +NI
Sbjct: 121 MMIITEYMENGALDKFLR--EKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNI 178
Query: 172 LIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSLGV 226
L+ +N + K++DFG ++ L + + + G + + APE ++ + + +D+WS G+
Sbjct: 179 LVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGI 238
Query: 227 LVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRIS 284
+++E + +G PY LS + +P P + + + Q++ RR
Sbjct: 239 VMWEVMTYGERPY--WELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPK 296
Query: 285 YEDLFSHPYPDLIHAP 300
+ D+ S LI AP
Sbjct: 297 FADIVSI-LDKLIRAP 311
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V II E+ + G L SF+R ++ + + Q +R + +K+L + N H DL +NIL+
Sbjct: 109 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV 168
Query: 174 KNNTL-KLADFGFAQFLAPNDQGDSIQGSPL-------YMAPEILAGSPYNAKADLWSLG 225
+N + K++DFG ++FL +D D S L + APE + + + +D+WS G
Sbjct: 169 NSNLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 227
Query: 226 VLVFEAL-FGHAPY 238
++++E + +G PY
Sbjct: 228 IVMWEVMSYGERPY 241
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFL 156
+ +I+E+C G+L +++RS L C F Q+ ++FL
Sbjct: 98 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFL 155
Query: 157 RENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEIL 210
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 156 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA--RLPLKWMAPETI 213
Query: 211 AGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMD 269
Y ++D+WS GVL++E G +PY + + + L P+ +P+
Sbjct: 214 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 273
Query: 270 FLSRLLQKDPMRRISYEDLFSH 291
+ +P +R ++ +L H
Sbjct: 274 TMLDCWHGEPSQRPTFSELVEH 295
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 144
Query: 176 N-TLKLADFGFAQF---LAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 145 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 205 YELMTGQLPYSNIN 218
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
Query: 176 N-TLKLADFGFAQF---LAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 200 YELMTGQLPYSNIN 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
Query: 176 N-TLKLADFGFAQF---LAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 200 YELMTGQLPYSNIN 213
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 131 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 188
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 189 EDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELL 246
Query: 233 FGHAPYASCN-LSQLR----------AQALSSAPITIPPNSL------------------ 263
G + + ++QL+ A +S P N +
Sbjct: 247 TGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGA 306
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ + +HPY H P E
Sbjct: 307 NPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPDDE 346
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLK 167
+K+P +YI++E GGD +F+R+ +L Q V +++L H DL
Sbjct: 183 QKQP--IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 168 PQNILI-KNNTLKLADFGFAQFLAPNDQGDS--IQGSPL-YMAPEILAGSPYNAKADLWS 223
+N L+ + N LK++DFG ++ A S ++ P+ + APE L Y++++D+WS
Sbjct: 241 ARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 224 LGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMR 281
G+L++E G +PY NLS + + +P L PD + + + +P +
Sbjct: 301 FGILLWETFSLGASPYP--NLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQ 358
Query: 282 RISYEDLF 289
R S+ ++
Sbjct: 359 RPSFSTIY 366
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ E + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 117 KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAAR 176
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 237 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
Query: 284 SYEDLFS 290
+E + S
Sbjct: 296 KFEQIVS 302
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 16/196 (8%)
Query: 114 YVYIILEYCDGGDLCSFI-RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
Y+Y+++EY GGDL + + + E++ + ++ ++V+A+ + H D+KP NIL
Sbjct: 135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNIL 194
Query: 173 I-KNNTLKLADFGFAQFLAPNDQGDSIQ--GSPLYMAPEILAG-------SPYNAKADLW 222
+ + ++LADFG L + S+ G+P Y++PEIL Y + D W
Sbjct: 195 LDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW 254
Query: 223 SLGVLVFEALFGHAPYASCNLSQLRAQALS-SAPITIP--PNSLSPDCMDFLSRLLQKDP 279
+LGV +E +G P+ + + ++ + + +++P + + DF+ RLL
Sbjct: 255 ALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPE 314
Query: 280 MR--RISYEDLFSHPY 293
R R D +HP+
Sbjct: 315 TRLGRGGAGDFRTHPF 330
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 167
Query: 176 N-TLKLADFGFA---QFLAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 168 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 227
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 228 YELMTGQLPYSNIN 241
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 117 IILEYCDGGDLCSF-IRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
+++E GG L F + E++ + + Q+ + +K+L E N H DL +N+L+ N
Sbjct: 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN 145
Query: 176 -NTLKLADFGFAQFLAPNDQ---GDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
+ K++DFG ++ L +D S PL + APE + +++++D+WS GV ++E
Sbjct: 146 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 205
Query: 231 AL-FGHAPYASCNLSQLRAQALSSAPITIPPN------SLSPDC 267
AL +G PY ++ A + PP +L DC
Sbjct: 206 ALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDC 249
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 100 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 159
Query: 176 N-TLKLADFGFA---QFLAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 160 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 219
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 220 YELMTGQLPYSNIN 233
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ E + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 117 KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 176
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 237 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
Query: 284 SYEDLFS 290
+E + S
Sbjct: 296 KFEQIVS 302
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 25/200 (12%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFL 156
+ +I+E+C G+L +++RS L C F Q+ ++FL
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFL 164
Query: 157 RENNVCHFDLKPQNILI-KNNTLKLADFGFAQ--FLAPNDQGDSIQGSPL-YMAPEILAG 212
H DL +NIL+ + N +K+ DFG A+ + P+ PL +MAPE +
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFD 224
Query: 213 SPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFL 271
Y ++D+WS GVL++E G +PY + + + L P+ +P+ +
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 272 SRLLQKDPMRRISYEDLFSH 291
+P +R ++ +L H
Sbjct: 285 LDCWHGEPSQRPTFSELVEH 304
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 28/201 (13%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-----------------LSEFQCQQFVRQLVLALKFLR 157
+ +I+E+C G+L +++RS L C F Q+ ++FL
Sbjct: 108 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF--QVAKGMEFLA 165
Query: 158 ENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEILA 211
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA--RLPLKWMAPETIF 223
Query: 212 GSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDF 270
Y ++D+WS GVL++E G +PY + + + L P+ +P+
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 283
Query: 271 LSRLLQKDPMRRISYEDLFSH 291
+ +P +R ++ +L H
Sbjct: 284 MLDCWHGEPSQRPTFSELVEH 304
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ ++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L + +S G+ YM+PE L G+ Y+ ++D+WS+G+ + E
Sbjct: 139 NSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 233 FGHAPYASCNLSQLR 247
G P + +L
Sbjct: 198 VGRYPIPPPDAKELE 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 51/247 (20%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +LC I+ HE++S + Q++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMS-----YLLYQMLCGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
L + H DLKP NI++K++ TLK+ DFG A+ + + + Y APE++ G
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 214 PYNAKADLWSLGVLVFEA-----LFGHAPY------------ASCNLSQLRAQALSSAPI 256
Y D+WS+G ++ E LF Y C + Q +
Sbjct: 201 GYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYV 260
Query: 257 TIPPN-------SLSPDCM----------------DFLSRLLQKDPMRRISYEDLFSHPY 293
P L PD + D LS++L D +RIS ++ HPY
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 294 PDLIHAP 300
++ + P
Sbjct: 321 INVWYDP 327
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ ++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L + +S G+ YM+PE L G+ Y+ ++D+WS+G+ + E
Sbjct: 139 NSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 233 FGHAPYASCNLSQLR 247
G P + +L
Sbjct: 198 VGRYPIPPPDAKELE 212
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ ++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 165
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L + +S G+ YM+PE L G+ Y+ ++D+WS+G+ + E
Sbjct: 166 NSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 224
Query: 233 FGHAPYASCNLSQLR 247
G P + +L
Sbjct: 225 VGRYPIPPPDAKELE 239
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDL 166
R + + ++I +E+CD G L +I R EKL + + Q+ + ++ + + DL
Sbjct: 89 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDL 148
Query: 167 KPQNI-LIKNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLG 225
KP NI L+ +K+ DFG L + + +G+ YM+PE ++ Y + DL++LG
Sbjct: 149 KPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALG 208
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRR 282
+++ E L H C+ + ++ + I + L +LL K P R
Sbjct: 209 LILAELL--HV----CDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDR 259
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 117/277 (42%), Gaps = 47/277 (16%)
Query: 64 YDTVQNSQIRLGTVK-YSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRPRYVYIILEYC 122
+D V N++ L +K ++D I + + RP ++ VY++L+
Sbjct: 92 FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS---------VYVVLDLM 142
Query: 123 DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLA 181
+ DL I S + L+ + F+ QL+ LK++ V H DLKP N+L+ N LK+
Sbjct: 143 ES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG 201
Query: 182 DFGFAQFL--APNDQG---DSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEALFGH 235
DFG A+ L +P + + Y APE+ L+ Y DLWS+G + E L
Sbjct: 202 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
Query: 236 APYASCN-LSQLR-------------AQALSSAPI-----TIPPNSLSP----------D 266
+ N + QL+ QA+ + + ++PP P
Sbjct: 262 QLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQ 321
Query: 267 CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+ L R+L+ +P RIS HP+ H P E
Sbjct: 322 ALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDE 358
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ E + G L SF+R H+ + + Q +R + +K+L + H DL +
Sbjct: 88 KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR 147
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + +PE +A + + +D+WS
Sbjct: 148 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 207
Query: 225 GVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
G++++E + +G PY + +Q +A+ PP + QKD R
Sbjct: 208 GIVLWEVMSYGERPYWEMS-NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 266
Query: 284 SYEDLFS 290
+E + S
Sbjct: 267 KFEQIVS 273
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 109 RKRPRYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLK 167
+K+P +YI++E GGD +F+R+ +L Q V +++L H DL
Sbjct: 183 QKQP--IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 168 PQNILI-KNNTLKLADFGFAQFLAPN---DQGDSIQGSPLYMAPEILAGSPYNAKADLWS 223
+N L+ + N LK++DFG ++ A G Q + APE L Y++++D+WS
Sbjct: 241 ARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 224 LGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMR 281
G+L++E G +PY NLS + + +P L PD + + + +P +
Sbjct: 301 FGILLWETFSLGASPYP--NLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQ 358
Query: 282 RISYEDLF 289
R S+ ++
Sbjct: 359 RPSFSTIY 366
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI++EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 147 VGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 263
Query: 287 DL 288
L
Sbjct: 264 YL 265
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 92 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 148
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ + LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLS 268
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPY 293
P +P N L P+ +D L ++L +P +RI E +HPY
Sbjct: 269 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFL 156
+ +I+E+C G+L +++RS L C F Q+ ++FL
Sbjct: 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFL 201
Query: 157 RENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEIL 210
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 202 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA--RLPLKWMAPETI 259
Query: 211 AGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMD 269
Y ++D+WS GVL++E G +PY + + + L P+ +P+
Sbjct: 260 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 319
Query: 270 FLSRLLQKDPMRRISYEDLFSH 291
+ +P +R ++ +L H
Sbjct: 320 TMLDCWHGEPSQRPTFSELVEH 341
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 61/253 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +L I+ HE++S + Q++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQMELDHERMS-----YLLYQMLCGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN--------LSQL---------RAQAL 251
++ G Y D+WS+G ++ E + G + + + QL + Q
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 252 SSAPITIPPN-------SLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
+ P L PD + D LS++L D +RIS ++
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 289 FSHPYPDLIHAPC 301
HPY ++ + P
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFL 156
+ +I+E+C G+L +++RS L C F Q+ ++FL
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFL 164
Query: 157 RENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEIL 210
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA--RLPLKWMAPETI 222
Query: 211 AGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMD 269
Y ++D+WS GVL++E G +PY + + + L P+ +P+
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 282
Query: 270 FLSRLLQKDPMRRISYEDLFSH 291
+ +P +R ++ +L H
Sbjct: 283 TMLDCWHGEPSQRPTFSELVEH 304
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFL 156
+ +I E+C G+L +++RS L C F Q+ ++FL
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFL 155
Query: 157 RENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEIL 210
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 156 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA--RLPLKWMAPETI 213
Query: 211 AGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMD 269
Y ++D+WS GVL++E G +PY + + + L P+ +P+
Sbjct: 214 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 273
Query: 270 FLSRLLQKDPMRRISYEDLFSH 291
+ +P +R ++ +L H
Sbjct: 274 TMLDCWHGEPSQRPTFSELVEH 295
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 61/252 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +L I+ HE++S + Q++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQMELDHERMS-----YLLYQMLCGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN----LSQLRAQALSSAPITIPP---- 260
++ G Y D+WS+G ++ E + G + + +++ Q + +P +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 261 ----------------NSLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
L PD + D LS++L D +RIS ++
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 289 FSHPYPDLIHAP 300
HPY ++ + P
Sbjct: 316 LQHPYINVWYDP 327
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ ++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L + +S G+ YM+PE L G+ Y+ ++D+WS+G+ + E
Sbjct: 139 NSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 233 FGHAPYASCNLSQLR 247
G P + +L
Sbjct: 198 VGRYPIPPPDAKELE 212
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENN-VCHFDLKPQNILI 173
+ I +E+ DGG L ++ ++ E + ++ L +LRE + + H D+KP NIL+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL 232
+ +KL DFG + L + +S G+ YM+PE L G+ Y+ ++D+WS+G+ + E
Sbjct: 139 NSRGEIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 233 FGHAPYASCNLSQLR 247
G P + +L
Sbjct: 198 VGRYPIPPPDAKELE 212
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 61/252 (24%)
Query: 99 GLSNLRAPEGR-KRPRYVYIILEYCDGGDLCSFIR---SHEKLSEFQCQQFVRQLVLALK 154
GL N+ P+ + + VYI++E D +L I+ HE++S + Q++ +K
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQMELDHERMS-----YLLYQMLCGIK 140
Query: 155 FLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL-----YMAPE 208
L + H DLKP NI++K++ TLK+ DFG A+ G S +P Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 209 ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN----LSQLRAQALSSAPITIPP---- 260
++ G Y D+WS+G ++ E + G + + +++ Q + +P +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 261 ----------------NSLSPDCM----------------DFLSRLLQKDPMRRISYEDL 288
L PD + D LS++L D +RIS ++
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 289 FSHPYPDLIHAP 300
HPY ++ + P
Sbjct: 316 LQHPYINVWYDP 327
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 25/198 (12%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEF--------------QCQQFVRQLVLALKFLRENN 160
+ +I+E+C G+L +++RS K +EF + Q+ ++FL
Sbjct: 107 LMVIVEFCKFGNLSTYLRS--KRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK 164
Query: 161 VCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEILAGSP 214
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 165 XIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA--RLPLKWMAPETIFDRV 222
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSR 273
Y ++D+WS GVL++E G +PY + + + L P+ +P+ +
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLD 282
Query: 274 LLQKDPMRRISYEDLFSH 291
+P +R ++ +L H
Sbjct: 283 CWHGEPSQRPTFSELVEH 300
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEF-------QCQQFVRQLVLALKFLRENNVCHFDLK 167
V +++EY +GG L + + E L + C Q Q V L ++ + H DLK
Sbjct: 75 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ-CSQGVAYLHSMQPKALIHRDLK 133
Query: 168 PQNILI--KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLG 225
P N+L+ LK+ DFG A + + + +GS +MAPE+ GS Y+ K D++S G
Sbjct: 134 PPNLLLVAGGTVLKICDFGTACDIQTHMTNN--KGSAAWMAPEVFEGSNYSEKCDVFSWG 191
Query: 226 VLVFEALFGHAPYASCNLSQLR-AQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRR 282
++++E + P+ R A+ + T PP +L ++R KDP +R
Sbjct: 192 IILWEVITRRKPFDEIGGPAFRIMWAVHNG--TRPPLIKNLPKPIESLMTRCWSKDPSQR 249
Query: 283 ISYEDL 288
S E++
Sbjct: 250 PSMEEI 255
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
I+ ++C+G L + E K + RQ + +L ++ H DLK NI +
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
Query: 176 N-TLKLADFGFA---QFLAPNDQGDSIQGSPLYMAPEILA---GSPYNAKADLWSLGVLV 228
+ T+K+ DFG A + + Q + + GS L+MAPE++ +PY+ ++D+++ G+++
Sbjct: 140 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 229 FEALFGHAPYASCN 242
+E + G PY++ N
Sbjct: 200 YELMTGQLPYSNIN 213
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFL 156
+I EYC GDL +F+R K F C + F Q+ + FL
Sbjct: 127 VITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 184
Query: 157 RENNVCHFDLKPQNILIKNNTL-KLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILA 211
N H DL +NIL+ + + K+ DFG A+ + ND ++G+ P+ +MAPE +
Sbjct: 185 ASKNCIHRDLAARNILLTHGRITKICDFGLARHIK-NDSNYVVKGNARLPVKWMAPESIF 243
Query: 212 GSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDF 270
Y ++D+WS G+ ++E G +PY + + + + P + D
Sbjct: 244 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDI 303
Query: 271 LSRLLQKDPMRRISYEDL 288
+ DP++R +++ +
Sbjct: 304 MKTCWDADPLKRPTFKQI 321
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 525 SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 585 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 136 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQ 194
K SE + Q V Q++ LK++ V H DLKP N+ + + LK+ DFG A+
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 181
Query: 195 GDSIQGSPLYMAPE-ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN----------- 242
G + + Y APE IL+ YN D+WS+G ++ E L G + +
Sbjct: 182 GYVV--TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 239
Query: 243 --------LSQLRAQALSSAPITIPPN----------SLSPDCMDFLSRLLQKDPMRRIS 284
+ +L +A S ++P SP D L ++L+ D +R++
Sbjct: 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 299
Query: 285 YEDLFSHPYPDLIHAPCAESHQTAIRIVTDAIHHDRENNSRRAFSLYCEALNY 337
+HP+ + P E+ A + D++ H++ +Y E +N+
Sbjct: 300 AAQALTHPFFEPFRDPEEETE--AQQPFDDSLEHEKLTVDEWKQHIYKEIVNF 350
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFL 156
+ +I+E+C G+L +++RS L C F Q+ ++FL
Sbjct: 109 LMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSF--QVAKGMEFL 166
Query: 157 RENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEIL 210
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 167 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA--RLPLKWMAPETI 224
Query: 211 AGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMD 269
Y ++D+WS GVL++E G +PY + + + L P+ +P+
Sbjct: 225 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 284
Query: 270 FLSRLLQKDPMRRISYEDLFSH 291
+ +P +R ++ +L H
Sbjct: 285 TMLDCWHGEPSQRPTFSELVEH 306
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEF-------QCQQFVRQLVLALKFLRENNVCHFDLK 167
V +++EY +GG L + + E L + C Q Q V L ++ + H DLK
Sbjct: 74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ-CSQGVAYLHSMQPKALIHRDLK 132
Query: 168 PQNILI--KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLG 225
P N+L+ LK+ DFG A + + + +GS +MAPE+ GS Y+ K D++S G
Sbjct: 133 PPNLLLVAGGTVLKICDFGTACDIQTHMTNN--KGSAAWMAPEVFEGSNYSEKCDVFSWG 190
Query: 226 VLVFEALFGHAPYASCNLSQLR-AQALSSAPITIPP--NSLSPDCMDFLSRLLQKDPMRR 282
++++E + P+ R A+ + T PP +L ++R KDP +R
Sbjct: 191 IILWEVITRRKPFDEIGGPAFRIMWAVHNG--TRPPLIKNLPKPIESLMTRCWSKDPSQR 248
Query: 283 ISYEDL 288
S E++
Sbjct: 249 PSMEEI 254
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V+II+E C G+L SF++ + L + QL AL +L H D+ +N+L+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 174 K-NNTLKLADFGFAQFLAPNDQGDSIQGS-PL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
+ +KL DFG ++++ + + +G P+ +MAPE + + + +D+W GV ++E
Sbjct: 145 SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 204
Query: 231 ALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
L G P+ + + + + + +PPN P +++ DP RR + +L
Sbjct: 205 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI++EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 147 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 263
Query: 287 DL 288
L
Sbjct: 264 YL 265
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N+LI +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 94 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 150
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 90 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 146
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 266
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFL 156
+ +I+E+C G+L +++RS L C F Q+ ++FL
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFL 164
Query: 157 RENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEIL 210
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA--RLPLKWMAPETI 222
Query: 211 AGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMD 269
Y ++D+WS GVL++E G +PY + + + L P+ +P+
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 282
Query: 270 FLSRLLQKDPMRRISYEDLFSH 291
+ +P +R ++ +L H
Sbjct: 283 TMLDCWHGEPSQRPTFSELVEH 304
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFL 156
+ +I E+C G+L +++RS L C F Q+ ++FL
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFL 155
Query: 157 RENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEIL 210
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 156 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA--RLPLKWMAPETI 213
Query: 211 AGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMD 269
Y ++D+WS GVL++E G +PY + + + L P+ +P+
Sbjct: 214 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 273
Query: 270 FLSRLLQKDPMRRISYEDLFSH 291
+ +P +R ++ +L H
Sbjct: 274 TMLDCWHGEPSQRPTFSELVEH 295
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 94 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 150
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK------------------LSEFQCQQFVRQLVLALKFL 156
+ +I E+C G+L +++RS L C F Q+ ++FL
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFL 155
Query: 157 RENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEIL 210
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 156 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA--RLPLKWMAPETI 213
Query: 211 AGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMD 269
Y ++D+WS GVL++E G +PY + + + L P+ +P+
Sbjct: 214 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 273
Query: 270 FLSRLLQKDPMRRISYEDLFSH 291
+ +P +R ++ +L H
Sbjct: 274 TMLDCWHGEPSQRPTFSELVEH 295
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 110 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 166
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 227 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 286
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 287 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 342
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 98 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 154
Query: 163 HFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 215 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 274
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 275 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 330
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 90 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 146
Query: 163 HFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 266
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 90 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 146
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 217 AKADLWSLGVLVFEAL---------------------FGHAPYASCN-LSQLRAQA-LSS 253
D+WS+G ++ E L G N + L+A+ L S
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLS 266
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 90 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 146
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 266
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 92 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 148
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 268
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 269 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 324
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII E+ G L F++S E K + F Q+ + F+ + N H DL+ NIL
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 316
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 317 VSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375
Query: 229 FEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYE 286
E + +G PY + ++ +AL P + + + + R + P R ++E
Sbjct: 376 MEIVTYGRIPYPGMSNPEV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFE 433
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 142
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 143 VSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 201
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 202 TEIVTHGRIPY 212
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 124 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT-LKLAD 182
G DL + ++ + LS+ Q V QL+ LK++ + H DLKP N+ + ++ L++ D
Sbjct: 116 GADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILD 174
Query: 183 FGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEALFGHAPYASC 241
FG A+ +++ + Y APEI L YN D+WS+G ++ E L G A +
Sbjct: 175 FGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
Query: 242 N-------------------LSQLRAQALSSAPITIPP----------NSLSPDCMDFLS 272
+ L+++ ++ + ++PP +P +D L
Sbjct: 233 DYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLG 292
Query: 273 RLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
R+L D +R+S + +H Y H P E
Sbjct: 293 RMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 323
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 94 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 150
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 201 TEIVTHGRIPY 211
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 95 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 151
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 211
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 212 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 271
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 272 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 327
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 96 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 152
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 212
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 213 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 272
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 273 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 328
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 87 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 143
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 203
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 204 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 263
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 264 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 319
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 94 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 150
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 88 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 144
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 205 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 264
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 265 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 320
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 90 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 146
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 217 AKADLWSLGVLVFEAL---------------------FGHAPYASCN-LSQLRAQA-LSS 253
D+WS+G ++ E L G N + L+A+ L S
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLS 266
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 31/192 (16%)
Query: 73 RLGTVKYSQVR--YDTI--------TSHSEFERPRAGLSNLRAPE--------GRKRPRY 114
+ G VKY + R YD S EF + NL + ++RP
Sbjct: 36 QFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-- 93
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNI 171
++II EY G L +++R E FQ QQ + + + A+++L H DL +N
Sbjct: 94 IFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 151
Query: 172 LIKN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ + +K++DFG ++++ +++ S+ GS + PE+L S +++K+D+W+ GVL
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEETSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210
Query: 228 VFEAL-FGHAPY 238
++E G PY
Sbjct: 211 MWEIYSLGKMPY 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 38/235 (16%)
Query: 107 EGRKRPRYVYIILEYC-DGGDLC--SFIRSHEKLSEFQCQQFVRQLVLALKFLR--ENNV 161
E +R Y+ +++EY D C ++ R + F+ QL+ ++ L NV
Sbjct: 93 ERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNV 152
Query: 162 CHFDLKPQNILIK--NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSP-YNAK 218
CH D+KP N+L+ + TLKL DFG A+ L+P++ + S Y APE++ G+ Y
Sbjct: 153 CHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTA 212
Query: 219 ADLWSLGVLVFEALFGHAPYASCNLSQ----------------LRAQALSSAPIT----- 257
D+WS+G + E + G + N + LR S +
Sbjct: 213 VDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSK 272
Query: 258 -IPPNSLSPD--------CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
IP +++ D D LS LLQ P R+ + HPY D +H P +
Sbjct: 273 GIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATK 327
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 143
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 144 VSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 202
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 203 TEIVTHGRIPY 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F+++ KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 149
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 150 VSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 208
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 209 TEIVTHGRIPY 219
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 88 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 144
Query: 163 HFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 205 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLS 264
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 265 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 320
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 27/200 (13%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEF----------------QCQQFVRQLVLALKFLRE 158
+ +I+E+C G+L +++RS K +EF + Q+ ++FL
Sbjct: 109 LMVIVEFCKFGNLSTYLRS--KRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLAS 166
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSPL-YMAPEILAG 212
H DL +NIL+ + N +K+ DFG A+ + + +GD+ PL +MAPE +
Sbjct: 167 RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA--RLPLKWMAPETIFD 224
Query: 213 SPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFL 271
Y ++D+WS GVL++E G +PY + + + L P+ +P+ +
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 272 SRLLQKDPMRRISYEDLFSH 291
+P +R ++ +L H
Sbjct: 285 LDCWHGEPSQRPTFSELVEH 304
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F+++ KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 207 TEIVTHGRIPY 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 201 TEIVTHGRIPY 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 17/187 (9%)
Query: 115 VYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY + G L F++ E L Q+ + ++ N H DL+ NIL
Sbjct: 78 IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANIL 137
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 138 VGNGLICKIADFGLARLIEDNEX-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 196
Query: 229 FEALF-GHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL----QKDPMRRI 283
E + G PY N ++ Q + P DC L L+ +KDP R
Sbjct: 197 TELVTKGRVPYPGMNNREVLEQVERGYRMPCP-----QDCPISLHELMIHCWKKDPEERP 251
Query: 284 SYEDLFS 290
++E L S
Sbjct: 252 TFEYLQS 258
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 94 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 150
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 95 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 151
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 212 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 271
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 272 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 327
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
V ++ E+ D DL +++ L + +RQ + L FL N + H DLKP+NIL
Sbjct: 86 VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL 144
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ + T+KLADFG A+ + D + + Y APE+L S Y D+WS+G +F
Sbjct: 145 VTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGC-IFAE 203
Query: 232 LFGHAPYASCN 242
+F P N
Sbjct: 204 MFRRKPLFCGN 214
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 201 TEIVTHGRIPY 211
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 109 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 165
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 166 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 225
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 226 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 285
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 286 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 321
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 136
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 137 VSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 195
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 196 TEIVTHGRIPY 206
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 110 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 167 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 226
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 227 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 286
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 287 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 110 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 167 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 226
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 227 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 286
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 287 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 146
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 147 VSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 205
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 206 TEIVTHGRIPY 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 37/218 (16%)
Query: 53 GSSTIRYGELQYDTVQNSQIR------LGTVKYSQVR--YDTI--------TSHSEFERP 96
G++ + YG + D + ++ G VKY + R YD S EF
Sbjct: 1 GTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEE 60
Query: 97 RAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV-- 146
+ NL + ++RP ++II EY G L +++R E FQ QQ +
Sbjct: 61 AKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGCLLNYLR--EMRHRFQTQQLLEM 116
Query: 147 -RQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGSPL- 203
+ + A+++L H DL +N L+ + +K++DFG ++++ ++ S+ GS
Sbjct: 117 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFP 175
Query: 204 --YMAPEILAGSPYNAKADLWSLGVLVFEAL-FGHAPY 238
+ PE+L S +++K+D+W+ GVL++E G PY
Sbjct: 176 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 150
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 151 VSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 209
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 210 TEIVTHGRIPY 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFL 156
+I EYC GDL +F+R K F C + F Q+ + FL
Sbjct: 127 VITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 184
Query: 157 RENNVCHFDLKPQNILIKNNTL-KLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILA 211
N H DL +NIL+ + + K+ DFG A+ + ND ++G+ P+ +MAPE +
Sbjct: 185 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIF 243
Query: 212 GSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDF 270
Y ++D+WS G+ ++E G +PY + + + + P + D
Sbjct: 244 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDI 303
Query: 271 LSRLLQKDPMRRISYEDL 288
+ DP++R +++ +
Sbjct: 304 MKTCWDADPLKRPTFKQI 321
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F+++ KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 151
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 152 VSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 210
Query: 229 FEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYED 287
E + G PY ++ Q L + P++ + + ++ P R +++
Sbjct: 211 TEIVTHGRIPYPGMTNPEV-IQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 269
Query: 288 LFS 290
L S
Sbjct: 270 LRS 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 207 TEIVTHGRIPY 217
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 31/192 (16%)
Query: 73 RLGTVKYSQVR--YDTI--------TSHSEFERPRAGLSNLRAPE--------GRKRPRY 114
+ G VKY + R YD S EF + NL + ++RP
Sbjct: 21 QFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-- 78
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNI 171
++II EY G L +++R E FQ QQ + + + A+++L H DL +N
Sbjct: 79 IFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 136
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ + +K++DFG ++++ +D+ S +GS + PE+L S +++K+D+W+ GVL
Sbjct: 137 LVNDQGVVKVSDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 195
Query: 228 VFEAL-FGHAPY 238
++E G PY
Sbjct: 196 MWEIYSLGKMPY 207
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 116 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 172
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 173 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 232
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 233 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 292
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 293 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 328
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 147 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 263
Query: 287 DL 288
L
Sbjct: 264 YL 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFL 156
+I EYC GDL +F+R K F C + F Q+ + FL
Sbjct: 122 VITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 179
Query: 157 RENNVCHFDLKPQNILIKNNTL-KLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILA 211
N H DL +NIL+ + + K+ DFG A+ + ND ++G+ P+ +MAPE +
Sbjct: 180 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIF 238
Query: 212 GSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDF 270
Y ++D+WS G+ ++E G +PY + + + + P + D
Sbjct: 239 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDI 298
Query: 271 LSRLLQKDPMRRISYEDL 288
+ DP++R +++ +
Sbjct: 299 MKTCWDADPLKRPTFKQI 316
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 136 KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPNDQ 194
+ SE + Q V Q++ LK++ V H DLKP N+ + + LK+ DFG A+
Sbjct: 140 EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 199
Query: 195 GDSIQGSPLYMAPE-ILAGSPYNAKADLWSLGVLVFEALFGHAPYASCN----------- 242
G + + Y APE IL+ YN D+WS+G ++ E L G + +
Sbjct: 200 GYVV--TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 257
Query: 243 --------LSQLRAQALSSAPITIPPN----------SLSPDCMDFLSRLLQKDPMRRIS 284
+ +L +A S ++P SP D L ++L+ D +R++
Sbjct: 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 317
Query: 285 YEDLFSHPYPDLIHAPCAESHQTAIRIVTDAIHHDRENNSRRAFSLYCEALNY 337
+HP+ + P E+ A + D++ H++ +Y E +N+
Sbjct: 318 AAQALTHPFFEPFRDPEEETE--AQQPFDDSLEHEKLTVDEWKQHIYKEIVNF 368
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI++EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 87 IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 147 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 263
Query: 287 DL 288
L
Sbjct: 264 YL 265
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 147 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 263
Query: 287 DL 288
L
Sbjct: 264 YL 265
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + ++ L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 100 LSNLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLR 157
L L A R+ P +YII EY G L F++S E K+ + F Q+ + ++
Sbjct: 70 LVRLYAVVTREEP--IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 127
Query: 158 ENNVCHFDLKPQNILIKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGS 213
N H DL+ N+L+ + + K+ADFG A+ + N+ + +G+ + APE +
Sbjct: 128 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFG 186
Query: 214 PYNAKADLWSLGVLVFEAL-FGHAPY 238
+ K+D+WS G+L++E + +G PY
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 78 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 137
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 138 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 196
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 197 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 254
Query: 287 DL 288
L
Sbjct: 255 YL 256
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 76 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 135
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 136 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 194
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 195 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 252
Query: 287 DL 288
L
Sbjct: 253 YL 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 31/192 (16%)
Query: 73 RLGTVKYSQVR--YDTI--------TSHSEFERPRAGLSNLRAPE--------GRKRPRY 114
+ G VKY + R YD S EF + NL + ++RP
Sbjct: 16 QFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-- 73
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNI 171
++II EY G L +++R E FQ QQ + + + A+++L H DL +N
Sbjct: 74 IFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 131
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ + +K++DFG ++++ ++ S+ GS + PE+L S +++K+D+W+ GVL
Sbjct: 132 LVNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 190
Query: 228 VFEAL-FGHAPY 238
++E G PY
Sbjct: 191 MWEIYSLGKMPY 202
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFL 156
+I EYC GDL +F+R K F C + F Q+ + FL
Sbjct: 104 VITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 161
Query: 157 RENNVCHFDLKPQNILIKNNTL-KLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILA 211
N H DL +NIL+ + + K+ DFG A+ + ND ++G+ P+ +MAPE +
Sbjct: 162 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIF 220
Query: 212 GSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDF 270
Y ++D+WS G+ ++E G +PY + + + + P + D
Sbjct: 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDI 280
Query: 271 LSRLLQKDPMRRISYEDL 288
+ DP++R +++ +
Sbjct: 281 MKTCWDADPLKRPTFKQI 298
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V II E+ + G L SF+R ++ + + Q +R + +K+L + N H L +NIL+
Sbjct: 83 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILV 142
Query: 174 KNNTL-KLADFGFAQFLAPNDQGDSIQGSPL-------YMAPEILAGSPYNAKADLWSLG 225
+N + K++DFG ++FL +D D S L + APE + + + +D+WS G
Sbjct: 143 NSNLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 201
Query: 226 VLVFEAL-FGHAPY 238
++++E + +G PY
Sbjct: 202 IVMWEVMSYGERPY 215
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 42/216 (19%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI--K 174
++ E+ + D F + + L+++ + ++ +++ AL + + H D+KP N++I +
Sbjct: 111 LVFEHVNNTD---FKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 175 NNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAG-SPYNAKADLWSLGVLVFEALF 233
+ L+L D+G A+F P + + S + PE+L Y+ D+WSLG ++ +F
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 227
Query: 234 GHAPY--ASCNLSQLR--AQALSSAP---------ITIPP-------------------- 260
P+ N QL A+ L + I + P
Sbjct: 228 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 287
Query: 261 ---NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+ +SP+ +DFL +LL+ D R++ + HPY
Sbjct: 288 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 87 IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 147 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 263
Query: 287 DL 288
L
Sbjct: 264 YL 265
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 31/192 (16%)
Query: 73 RLGTVKYSQVR--YDTI--------TSHSEFERPRAGLSNLRAPE--------GRKRPRY 114
+ G VKY + R YD S EF + NL + ++RP
Sbjct: 20 QFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-- 77
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNI 171
++II EY G L +++R E FQ QQ + + + A+++L H DL +N
Sbjct: 78 IFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 135
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ + +K++DFG ++++ ++ S+ GS + PE+L S +++K+D+W+ GVL
Sbjct: 136 LVNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 194
Query: 228 VFEAL-FGHAPY 238
++E G PY
Sbjct: 195 MWEIYSLGKMPY 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQ---CQQFVRQLVLALKFLRENNVCHFDLKPQN 170
Y+YI ++ C +L ++ + E + C Q+ A++FL + H DLKP N
Sbjct: 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSN 148
Query: 171 ILIK-NNTLKLADFGFAQFLAPNDQGDSI-------------QGSPLYMAPEILAGSPYN 216
I ++ +K+ DFG + +++ ++ G+ LYM+PE + G+ Y+
Sbjct: 149 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208
Query: 217 AKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSA-PITIPPNSLSPDCMDFLSRLL 275
K D++SLG+++FE L+ P+++ R + L+ + PP
Sbjct: 209 HKVDIFSLGLILFELLY---PFST---QMERVRTLTDVRNLKFPP------------LFT 250
Query: 276 QKDPMRRISYEDLFSHPYPDLIHAPCAESHQTAIRIVTDAIHHD 319
QK P + +D+ S P AI I+ +A+ D
Sbjct: 251 QKYPCEYVMVQDMLS---------PSPMERPEAINIIENAVFED 285
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 95/182 (52%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 33 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 90
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L ++++H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 91 LKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 229 FE 230
+E
Sbjct: 211 YE 212
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQ--------------------FVRQLVLALKFL 156
+I EYC GDL +F+R K F C + F Q+ + FL
Sbjct: 120 VITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 177
Query: 157 RENNVCHFDLKPQNILIKNNTL-KLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILA 211
N H DL +NIL+ + + K+ DFG A+ + ND ++G+ P+ +MAPE +
Sbjct: 178 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIF 236
Query: 212 GSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDF 270
Y ++D+WS G+ ++E G +PY + + + + P + D
Sbjct: 237 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDI 296
Query: 271 LSRLLQKDPMRRISYEDL 288
+ DP++R +++ +
Sbjct: 297 MKTCWDADPLKRPTFKQI 314
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 38/226 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL +++ ++ C F+ Q++ LK++ NV
Sbjct: 92 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKTQHLSNDHICY-FLYQILRGLKYIHSANVL 148
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 268
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPY 293
P +P N L P+ +D L ++L +P +RI E +HPY
Sbjct: 269 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 31/192 (16%)
Query: 73 RLGTVKYSQVR--YDTI--------TSHSEFERPRAGLSNLRAPE--------GRKRPRY 114
+ G VKY + R YD S EF + NL + ++RP
Sbjct: 21 QFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-- 78
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNI 171
++II EY G L +++R E FQ QQ + + + A+++L H DL +N
Sbjct: 79 IFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 136
Query: 172 LIKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ + +K++DFG ++++ ++ S+ GS + PE+L S +++K+D+W+ GVL
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 195
Query: 228 VFEAL-FGHAPY 238
++E G PY
Sbjct: 196 MWEIYSLGKMPY 207
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 124 GGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLAD 182
G DL + ++ + LS+ Q V QL+ LK++ + H DLKP N+ + + L++ D
Sbjct: 108 GADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILD 166
Query: 183 FGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEALFGHAPYASC 241
FG A+ +++ + Y APEI L YN D+WS+G ++ E L G A +
Sbjct: 167 FGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
Query: 242 N-------------------LSQLRAQALSSAPITIPP----------NSLSPDCMDFLS 272
+ L+++ ++ + ++PP +P +D L
Sbjct: 225 DYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLG 284
Query: 273 RLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
R+L D +R+S + +H Y H P E
Sbjct: 285 RMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 315
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 254 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 313
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG + + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 314 VGENLVCKVADFGLGRLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 372
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 373 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 430
Query: 287 DL 288
L
Sbjct: 431 YL 432
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 38/236 (16%)
Query: 103 LRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC 162
+RAP + + VYI+ + + DL ++ ++ C F+ Q++ LK++ NV
Sbjct: 94 IRAPTIEQM-KDVYIVQDLMET-DLYKLLKCQHLSNDHICY-FLYQILRGLKYIHSANVL 150
Query: 163 HFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSI----QGSPLYMAPEILAGSP-YN 216
H DLKP N+L+ LK+ DFG A+ P+ + Y APEI+ S Y
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 217 AKADLWSLGVLVFEALFGHAPYA-----------------------SCNLSQLRAQALSS 253
D+WS+G ++ E L + +C ++ L S
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 254 AP--ITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
P +P N L P+ +D L ++L +P +RI E +HPY + + P E
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 108 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 165
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
++ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 166 EDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 224 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 283
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 284 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 323
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++S +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKS-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
++ LK+ DFG + +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDSELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 145 FVRQLVLALKFLRENNVCHFDLKPQNILIK--NNTLKLADFGFAQFLAPNDQGDSIQGSP 202
++ QL+ +L ++ +CH D+KPQN+L+ + LKL DFG A+ L + S S
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR 205
Query: 203 LYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPY-ASCNLSQL-----------RAQ 249
Y APE++ G+ Y D+WS G ++ E + G + + QL R Q
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ 265
Query: 250 ALSSAP-------ITIPPNSLS--------PDCMDFLSRLLQKDPMRRISYEDLFSHPYP 294
+ P I P+ S PD +D +SRLL+ P R++ + HP+
Sbjct: 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
Query: 295 D 295
D
Sbjct: 326 D 326
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 104 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 161
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
++ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 162 EDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 220 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 280 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 319
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII E+ G L F++S E K + F Q+ + F+ + N H DL+ NIL
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 143
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 144 VSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 202
Query: 229 FEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYE 286
E + +G PY + ++ +AL P + + + + R + P R ++E
Sbjct: 203 MEIVTYGRIPYPGMSNPEV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFE 260
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 48 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 105
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 106 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 165
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 166 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 225
Query: 229 FE 230
+E
Sbjct: 226 YE 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 109 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 166
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ A D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 167 EDCELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 285 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 312
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 313 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +K+P R ++E
Sbjct: 372 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKEPEERPTFE 429
Query: 287 DL 288
L
Sbjct: 430 YL 431
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 30 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 229 FE 230
+E
Sbjct: 208 YE 209
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 61 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 178
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 179 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 238
Query: 229 FE 230
+E
Sbjct: 239 YE 240
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 395
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 396 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 454
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +K+P R ++E
Sbjct: 455 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKEPEERPTFE 512
Query: 287 DL 288
L
Sbjct: 513 YL 514
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 312
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 313 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +K+P R ++E
Sbjct: 372 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKEPEERPTFE 429
Query: 287 DL 288
L
Sbjct: 430 YL 431
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 115 VYIILEYCDGGDLCSF-IRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +++E GG L F + E++ + + Q+ + +K+L E N H +L +N+L+
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL 469
Query: 174 KN-NTLKLADFGFAQFLAPNDQ---GDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLV 228
N + K++DFG ++ L +D S PL + APE + +++++D+WS GV +
Sbjct: 470 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 529
Query: 229 FEAL-FGHAPYASCNLSQLRAQALSSAPITIPPN------SLSPDC 267
+EAL +G PY ++ A + PP +L DC
Sbjct: 530 WEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDC 575
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 48 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 105
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 106 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 165
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 166 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 225
Query: 229 FE 230
+E
Sbjct: 226 YE 227
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 31/192 (16%)
Query: 73 RLGTVKYSQVR--YDTI--------TSHSEFERPRAGLSNLRAPE--------GRKRPRY 114
+ G VKY + R YD S EF + NL + ++RP
Sbjct: 36 QFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-- 93
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFV---RQLVLALKFLRENNVCHFDLKPQNI 171
++II EY G L +++R E FQ QQ + + + A+++L H DL +N
Sbjct: 94 IFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 151
Query: 172 LIKN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ + +K++DFG ++++ ++ S+ GS + PE+L S +++K+D+W+ GVL
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210
Query: 228 VFEAL-FGHAPY 238
++E G PY
Sbjct: 211 MWEIYSLGKMPY 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 109 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 166
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ A D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 167 EDCELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 285 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 109 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 166
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ A D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 167 EDCELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 285 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKX-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 28 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 85
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 86 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 145
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 146 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 205
Query: 229 FE 230
+E
Sbjct: 206 YE 207
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 36 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 93
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 94 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 153
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 154 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 213
Query: 229 FE 230
+E
Sbjct: 214 YE 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 29 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 86
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 87 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 146
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 147 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 206
Query: 229 FE 230
+E
Sbjct: 207 YE 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 34 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 91
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 92 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 151
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 152 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 211
Query: 229 FE 230
+E
Sbjct: 212 YE 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 23/171 (13%)
Query: 110 KRPRYVYIILEYCDGGDLCSFIRSHEKLSEFQCQ--QFVRQLVLALKFLRENNVCHFDLK 167
K+ ++I EYC+ L I S E L++ + + + RQ++ AL ++ + H +LK
Sbjct: 85 KKKSTLFIQXEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLK 143
Query: 168 PQNILI-KNNTLKLADFGFAQFL---------------APNDQGDSIQGSPLYMAPEILA 211
P NI I ++ +K+ DFG A+ + +D S G+ Y+A E+L
Sbjct: 144 PXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLD 203
Query: 212 GSP-YNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPN 261
G+ YN K D +SLG++ FE ++ P+++ + L S I PP+
Sbjct: 204 GTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVSIEFPPD 251
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 30 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 229 FE 230
+E
Sbjct: 208 YE 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 22/185 (11%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPE-----------GRKR 111
+YD +Q++ + VK ++++ T +FER L +L+ GR
Sbjct: 33 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR-- 88
Query: 112 PRYVYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQN 170
R + +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +N
Sbjct: 89 -RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 147
Query: 171 ILIKN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLG 225
IL++N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS G
Sbjct: 148 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
Query: 226 VLVFE 230
V+++E
Sbjct: 208 VVLYE 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 35 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 92
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 93 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 152
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 153 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 212
Query: 229 FE 230
+E
Sbjct: 213 YE 214
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 37 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 94
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 95 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 154
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 155 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 214
Query: 229 FE 230
+E
Sbjct: 215 YE 216
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 506
Query: 176 NTLKLADFGFAQFLAPND---QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ + + P+ + APE + +++K+D+WS GVL++EA
Sbjct: 507 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 566
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 567 FSYGQKPYRGMKGSEVTA 584
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L ++RS + L +F + A+++L NN H DL +N+L
Sbjct: 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 321
Query: 173 I-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ ++N K++DFG + + D+ + + APE L ++ K+D+WS G+L++E
Sbjct: 322 VSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
Query: 232 L-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDL 288
FG PY L + + + P+ P D + D R ++ L
Sbjct: 380 YSFGRVPYPRIPLKDVVPRVEKGYKMD-APDGCPPAVYDVMKNCWHLDAATRPTFLQL 436
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS-PYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI+ + YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY + G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 84 IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANIL 143
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 144 VGENLVCKVADFGLARLIEDNEW-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 202
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +K+P R ++E
Sbjct: 203 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKEPEERPTFE 260
Query: 287 DL 288
L
Sbjct: 261 YL 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H DL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + + + + +G+ + APE + + K+D+WS G+L+
Sbjct: 142 VSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 201 TEIVTHGRIPY 211
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 505
Query: 176 NTLKLADFGFAQFLAPND---QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ + + P+ + APE + +++K+D+WS GVL++EA
Sbjct: 506 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 565
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 566 FSYGQKPYRGMKGSEVTA 583
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 113 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 170
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 171 EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 229 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 288
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 289 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 328
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 76/131 (58%), Gaps = 7/131 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V II EY + G L +F+R ++ + + Q +R + +K+L + + H DL +NIL+
Sbjct: 105 VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILV 164
Query: 174 KNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+N + K++DFG ++ L + + + +G + + APE +A + + +D+WS G+++
Sbjct: 165 NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 224
Query: 229 FEAL-FGHAPY 238
+E + +G PY
Sbjct: 225 WEVMSYGERPY 235
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKX-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL NIL
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANIL 146
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 147 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 263
Query: 287 DL 288
L
Sbjct: 264 YL 265
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 176 NTLKLADFGFAQFLAPND---QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ + + P+ + APE + +++K+D+WS GVL++EA
Sbjct: 164 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 223
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 224 FSYGQKPYRGMKGSEVTA 241
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 176 NTLKLADFGFAQFLAPND---QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ + + P+ + APE + +++K+D+WS GVL++EA
Sbjct: 164 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 223
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 224 FSYGQKPYRGMKGSEVTA 241
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 176 NTLKLADFGFAQFLAPNDQGDSIQ---GSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ Q P+ + APE + +++K+D+WS GVL++EA
Sbjct: 148 HYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 207
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 208 FSYGQKPYRGMKGSEVTA 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 161
Query: 176 NTLKLADFGFAQFLAPND---QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ + + P+ + APE + +++K+D+WS GVL++EA
Sbjct: 162 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 221
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 222 FSYGQKPYRGMKGSEVTA 239
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIR--SHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII EY + G L F++ S KL+ + Q+ + F+ E N H +L+ NIL
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANIL 137
Query: 173 IKNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+D+WS G+L+
Sbjct: 138 VSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 196
Query: 229 FEAL-FGHAPY 238
E + G PY
Sbjct: 197 TEIVTHGRIPY 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 87 IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 147 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +KDP R ++E
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKDPEERPTFE 263
Query: 287 DL 288
L
Sbjct: 264 YL 265
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 107 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 164
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 165 EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 223 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 282
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 283 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 322
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 107 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 164
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 165 EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 223 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 282
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 283 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 322
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 76/131 (58%), Gaps = 7/131 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V II EY + G L +F+R ++ + + Q +R + +K+L + + H DL +NIL+
Sbjct: 90 VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV 149
Query: 174 KNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+N + K++DFG ++ L + + + +G + + APE +A + + +D+WS G+++
Sbjct: 150 NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 209
Query: 229 FEAL-FGHAPY 238
+E + +G PY
Sbjct: 210 WEVMSYGERPY 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 114 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 171
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 172 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 230 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 289
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 290 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 329
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 114 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 171
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 172 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 230 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 289
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 290 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 329
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 108 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 165
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 166 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 224 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 283
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 284 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 323
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 153
Query: 176 NTLKLADFGFAQFLAPND---QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ + + P+ + APE + +++K+D+WS GVL++EA
Sbjct: 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 213
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 214 FSYGQKPYRGMKGSEVTA 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 114 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 171
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 172 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 230 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 289
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 290 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 329
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 104 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 161
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 162 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 220 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 280 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 113 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 170
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 171 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 229 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 288
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 289 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 328
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY + G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 84 IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANIL 143
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 144 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 202
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +K+P R ++E
Sbjct: 203 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKEPEERPTFE 260
Query: 287 DL 288
L
Sbjct: 261 YL 262
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 76/131 (58%), Gaps = 7/131 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V II EY + G L +F+R ++ + + Q +R + +K+L + + H DL +NIL+
Sbjct: 84 VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV 143
Query: 174 KNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+N + K++DFG ++ L + + + +G + + APE +A + + +D+WS G+++
Sbjct: 144 NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 203
Query: 229 FEAL-FGHAPY 238
+E + +G PY
Sbjct: 204 WEVMSYGERPY 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 176 NTLKLADFGFAQFLAPND---QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ + + P+ + APE + +++K+D+WS GVL++EA
Sbjct: 148 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 207
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 208 FSYGQKPYRGMKGSEVTA 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 125 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 182
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 183 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 241 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 300
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 301 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 340
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 129/319 (40%), Gaps = 74/319 (23%)
Query: 9 YGTVRLGSVKYGQVQLSTVRYGKV-RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTV 67
+G ++G YG V + YG+ ++R + G + S+TIR + +
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEG------IPSTTIREISILKELK 58
Query: 68 QNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRPRYVYIILEYCDGGDL 127
++ ++L V +++ R + H + + + +L+ C+GG
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKK--------------------LLDVCEGG-- 96
Query: 128 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFA 186
L + F+ QL+ + + + V H DLKPQN+LI + LK+ADFG A
Sbjct: 97 ---------LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Query: 187 Q-FLAPNDQGDSIQGSPLYMAPEILAGS-PYNAKADLWSLGVLVFEALFGHAPYASCNLS 244
+ F P + + Y AP++L GS Y+ D+WS+G + E + G + + +
Sbjct: 148 RAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEA 207
Query: 245 QLRAQALSSAPITIPPNS------------------------------LSPDCMDFLSRL 274
Q + I PNS L +D LS++
Sbjct: 208 D---QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264
Query: 275 LQKDPMRRISYEDLFSHPY 293
L+ DP +RI+ + H Y
Sbjct: 265 LKLDPNQRITAKQALEHAY 283
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 125 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 182
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 183 EDCELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 241 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 300
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 301 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 340
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 80 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 139
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 140 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 198
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +K+P R ++E
Sbjct: 199 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKEPEERPTFE 256
Query: 287 DL 288
L
Sbjct: 257 YL 258
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 253 IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 312
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 313 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +K+P R ++E
Sbjct: 372 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKEPEERPTFE 429
Query: 287 DL 288
L
Sbjct: 430 YL 431
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 129/319 (40%), Gaps = 74/319 (23%)
Query: 9 YGTVRLGSVKYGQVQLSTVRYGKV-RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTV 67
+G ++G YG V + YG+ ++R + G + S+TIR + +
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEG------IPSTTIREISILKELK 58
Query: 68 QNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRPRYVYIILEYCDGGDL 127
++ ++L V +++ R + H + + + +L+ C+GG
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKK--------------------LLDVCEGG-- 96
Query: 128 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFA 186
L + F+ QL+ + + + V H DLKPQN+LI + LK+ADFG A
Sbjct: 97 ---------LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Query: 187 Q-FLAPNDQGDSIQGSPLYMAPEILAGS-PYNAKADLWSLGVLVFEALFGHAPYASCNLS 244
+ F P + + Y AP++L GS Y+ D+WS+G + E + G + + +
Sbjct: 148 RAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA 207
Query: 245 QLRAQALSSAPITIPPNS------------------------------LSPDCMDFLSRL 274
Q + I PNS L +D LS++
Sbjct: 208 D---QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264
Query: 275 LQKDPMRRISYEDLFSHPY 293
L+ DP +RI+ + H Y
Sbjct: 265 LKLDPNQRITAKQALEHAY 283
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 108 VYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 165
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 166 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 224 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 283
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 284 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 323
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 107 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 164
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 165 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 223 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 282
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 283 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 322
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 121 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 178
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 179 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 237 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 296
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 297 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 336
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 107 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 164
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 165 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 223 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 282
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 283 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 322
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 101 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 158
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 159 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 216
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 217 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 276
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 277 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 316
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 98 AGLSN-LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKF 155
+G S +R + +RP +ILE + DL FI L E + F Q++ A++
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 156 LRENNVCHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
V H D+K +NILI N LKL DFG L D G+ +Y PE +
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYH 188
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
Y+ + A +WSLG+L+++ + G P+ + +R Q +S +C +
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIR 240
Query: 273 RLLQKDPMRRISYEDLFSHPYPDLIHAP--CAESH 305
L P R ++E++ +HP+ + P AE H
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIH 275
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 122 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 179
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 180 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 238 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 297
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 298 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 337
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 109 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 166
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 167 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 285 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 122 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 179
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 180 EDCELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 238 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 297
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 298 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 337
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 104 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 161
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 162 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 220 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 280 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 319
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 98 AGLSN-LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKF 155
+G S +R + +RP +ILE + DL FI L E + F Q++ A++
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 156 LRENNVCHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
V H D+K +NILI N LKL DFG L D G+ +Y PE +
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYH 184
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
Y+ + A +WSLG+L+++ + G P+ + +R Q +S +C +
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSXECQHLIR 236
Query: 273 RLLQKDPMRRISYEDLFSHPYPDLIHAP--CAESH 305
L P R ++E++ +HP+ + P AE H
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIH 271
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 84 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 143
Query: 176 NTLKLADFGFAQFLAPND---QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ + + P+ + APE + +++K+D+WS GVL++EA
Sbjct: 144 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 203
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 204 FSYGQKPYRGMKGSEVTA 221
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
Query: 117 IILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
++L +GGDL I E + + ++ L+ L + + DLKP+NIL+
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD 320
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
++ ++++D G A + G+ YMAPE++ Y D W+LG L++E +
Sbjct: 321 DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKDPMRRI-----SY 285
G +P+ +++ + + +P SP S+LL KDP R+ S
Sbjct: 381 GQSPFQQ-RKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSA 439
Query: 286 EDLFSHP 292
++ HP
Sbjct: 440 REVKEHP 446
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 121 VYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 178
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 179 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 237 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 296
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 297 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 336
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 108 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 165
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 166 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 224 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 283
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 284 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 323
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 99 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 156
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 157 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 215 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 274
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 275 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 314
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
Query: 117 IILEYCDGGDLCSFI--RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
++L +GGDL I E + + ++ L+ L + + DLKP+NIL+
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD 320
Query: 175 NNT-LKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALF 233
++ ++++D G A + G+ YMAPE++ Y D W+LG L++E +
Sbjct: 321 DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 234 GHAPYASCNLSQLRAQALSSAPITIPP---NSLSPDCMDFLSRLLQKDPMRRI-----SY 285
G +P+ +++ + + +P SP S+LL KDP R+ S
Sbjct: 381 GQSPFQQ-RKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSA 439
Query: 286 EDLFSHP 292
++ HP
Sbjct: 440 REVKEHP 446
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 100 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 157
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 158 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 216 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 275
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 276 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 315
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 98 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 155
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 156 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 273
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 122 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 179
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 180 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 238 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 297
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 298 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 337
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNI-LIKN 175
+++E + G L +++ + + + + V Q+ + +K+L E+N H DL +N+ L+
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 141
Query: 176 NTLKLADFGFAQFLAPND---QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ K++DFG ++ L ++ + + P+ + APE + +++K+D+WS GVL++EA
Sbjct: 142 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 201
Query: 232 L-FGHAPYASCNLSQLRA 248
+G PY S++ A
Sbjct: 202 FSYGQKPYRGMKGSEVTA 219
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 129/319 (40%), Gaps = 74/319 (23%)
Query: 9 YGTVRLGSVKYGQVQLSTVRYGKV-RYSQVRSDTVRSGTVRYDIVGSSTIRYGELQYDTV 67
+G ++G YG V + YG+ ++R + G + S+TIR + +
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEG------IPSTTIREISILKELK 58
Query: 68 QNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRPRYVYIILEYCDGGDL 127
++ ++L V +++ R + H + + + +L+ C+GG
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKK--------------------LLDVCEGG-- 96
Query: 128 CSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFA 186
L + F+ QL+ + + + V H DLKPQN+LI + LK+ADFG A
Sbjct: 97 ---------LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Query: 187 Q-FLAPNDQGDSIQGSPLYMAPEILAGS-PYNAKADLWSLGVLVFEALFGHAPYASCNLS 244
+ F P + + Y AP++L GS Y+ D+WS+G + E + G + + +
Sbjct: 148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA 207
Query: 245 QLRAQALSSAPITIPPNS------------------------------LSPDCMDFLSRL 274
Q + I PNS L +D LS++
Sbjct: 208 D---QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264
Query: 275 LQKDPMRRISYEDLFSHPY 293
L+ DP +RI+ + H Y
Sbjct: 265 LKLDPNQRITAKQALEHAY 283
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 112 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 169
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 170 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 227
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 228 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 287
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 288 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 327
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 99 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 156
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 157 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 215 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 274
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 275 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 314
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 104 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 161
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 162 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 220 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 280 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 319
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 98 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 155
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 156 EDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 273
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 37/215 (17%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
Y+++ + G DL ++ HEKL E + Q V Q++ L+++ + H DLKP N+ +
Sbjct: 106 YLVMPFM-GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE 163
Query: 176 N-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPE-ILAGSPYNAKADLWSLGVLVFEALF 233
+ LK+ DFG A+ G + + Y APE IL Y D+WS+G ++ E +
Sbjct: 164 DCELKILDFGLARQADSEMXGXVV--TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
Query: 234 GHAPY-ASCNLSQLR-------------AQALSSAP----------------ITIPPNSL 263
G + S +L QL+ Q L S +I N+
Sbjct: 222 GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNA- 280
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIH 298
SP ++ L ++L D +R++ + +HPY + +H
Sbjct: 281 SPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 98 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 155
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 156 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 273
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
V ++ E+ D DL +++ L + +RQ + L FL N + H DLKP+NIL
Sbjct: 94 VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL 152
Query: 173 IKN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ + T+KLADFG A+ + + + Y APE+L S Y D+WS+G +F
Sbjct: 153 VTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC-IFAE 211
Query: 232 LFGHAPYASCN 242
+F P N
Sbjct: 212 MFRRKPLFCGN 222
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 31/188 (16%)
Query: 137 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQ 194
L + Q + ++ QL+ + ++ + H DLKPQN+LI ++ LKLADFG A+ F P
Sbjct: 116 LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175
Query: 195 GDSIQGSPLYMAPEILAGS-PYNAKADLWSLGVLVFEALFGHAPYASCN----------- 242
+ Y AP++L GS Y+ D+WS+G + E + G +
Sbjct: 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
Query: 243 -----------------LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
Q Q P + + +D LS +L DP +RIS
Sbjct: 236 LGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA 295
Query: 286 EDLFSHPY 293
D +HPY
Sbjct: 296 RDAMNHPY 303
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 23/146 (15%)
Query: 115 VYIILEYCDGGDLCSFIR-------------SH---EKLSEFQCQQFVRQLVLALKFLRE 158
V +I EYC GDL +F+R SH E+LS F Q+ + FL
Sbjct: 125 VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLAS 184
Query: 159 NNVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILAGS 213
N H D+ +N+L+ N + K+ DFG A+ + ND ++G+ P+ +MAPE +
Sbjct: 185 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDC 243
Query: 214 PYNAKADLWSLGVLVFEAL-FGHAPY 238
Y ++D+WS G+L++E G PY
Sbjct: 244 VYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 31/188 (16%)
Query: 137 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQ 194
L + Q + ++ QL+ + ++ + H DLKPQN+LI ++ LKLADFG A+ F P
Sbjct: 116 LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175
Query: 195 GDSIQGSPLYMAPEILAGS-PYNAKADLWSLGVLVFEALFGHAPYASCN----------- 242
+ Y AP++L GS Y+ D+WS+G + E + G +
Sbjct: 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
Query: 243 -----------------LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
Q Q P + + +D LS +L DP +RIS
Sbjct: 236 LGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA 295
Query: 286 EDLFSHPY 293
D +HPY
Sbjct: 296 RDAMNHPY 303
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 98 AGLSN-LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKF 155
+G S +R + +RP +ILE + DL FI L E + F Q++ A++
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 156 LRENNVCHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
V H D+K +NILI N LKL DFG L D G+ +Y PE +
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYH 187
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
Y+ + A +WSLG+L+++ + G P+ + +R Q +S +C +
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIR 239
Query: 273 RLLQKDPMRRISYEDLFSHPYPDLIHAP--CAESH 305
L P R ++E++ +HP+ + P AE H
Sbjct: 240 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIH 274
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 33 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 90
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+E+ G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 91 LKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 229 FE 230
+E
Sbjct: 211 YE 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L ++RS + L +F + A+++L NN H DL +N+L
Sbjct: 81 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 140
Query: 173 I-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ ++N K++DFG + + D+ + + APE L + ++ K+D+WS G+L++E
Sbjct: 141 VSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
Query: 232 L-FGHAPY 238
FG PY
Sbjct: 199 YSFGRVPY 206
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 98 AGLSN-LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKF 155
+G S +R + +RP +ILE + DL FI L E + F Q++ A++
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 156 LRENNVCHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
V H D+K +NILI N LKL DFG L D G+ +Y PE +
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYH 184
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
Y+ + A +WSLG+L+++ + G P+ + +R Q +S +C +
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIR 236
Query: 273 RLLQKDPMRRISYEDLFSHPYPDLIHAP--CAESH 305
L P R ++E++ +HP+ + P AE H
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIH 271
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 98 AGLSN-LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKF 155
+G S +R + +RP +ILE + DL FI L E + F Q++ A++
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 156 LRENNVCHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
V H D+K +NILI N LKL DFG L D G+ +Y PE +
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYH 189
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
Y+ + A +WSLG+L+++ + G P+ + +R Q +S +C +
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIR 241
Query: 273 RLLQKDPMRRISYEDLFSHPY 293
L P R ++E++ +HP+
Sbjct: 242 WCLALRPSDRPTFEEIQNHPW 262
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L ++RS + L +F + A+++L NN H DL +N+L
Sbjct: 90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 149
Query: 173 I-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ ++N K++DFG + + D+ + + APE L ++ K+D+WS G+L++E
Sbjct: 150 VSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 232 L-FGHAPY 238
FG PY
Sbjct: 208 YSFGRVPY 215
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ + ++ E+CD F + L + F+ QL+ L F NV H DLKPQN+L
Sbjct: 74 KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133
Query: 173 I-KNNTLKLADFGFAQ-FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVF 229
I +N LKLADFG A+ F P + + Y P++L G+ Y+ D+WS G +
Sbjct: 134 INRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 230 EALFGHAPYASCN---------------LSQLRAQALSSAP--------------ITIPP 260
E P N ++ + +++ P + + P
Sbjct: 194 ELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP 253
Query: 261 NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
L+ D L LL+ +P++RIS E+ HPY
Sbjct: 254 -KLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 98 AGLSN-LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKF 155
+G S +R + +RP +ILE + DL FI L E + F Q++ A++
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 156 LRENNVCHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
V H D+K +NILI N LKL DFG L D G+ +Y PE +
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYH 188
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
Y+ + A +WSLG+L+++ + G P+ + +R Q +S +C +
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIR 240
Query: 273 RLLQKDPMRRISYEDLFSHPY 293
L P R ++E++ +HP+
Sbjct: 241 WCLALRPSDRPTFEEIQNHPW 261
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 30 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H DL +NIL+
Sbjct: 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 229 FE 230
+E
Sbjct: 208 YE 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 99 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 158
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 159 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 217
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 218 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSXECQHLIRWCLALRPXDRPTF 269
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 270 EEIQNHPW 277
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 98 AGLSN-LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKF 155
+G S +R + +RP +ILE + DL FI L E + F Q++ A++
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 156 LRENNVCHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
V H D+K +NILI N LKL DFG L D G+ +Y PE +
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYH 189
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
Y+ + A +WSLG+L+++ + G P+ + +R Q +S +C +
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIR 241
Query: 273 RLLQKDPMRRISYEDLFSHPY 293
L P R ++E++ +HP+
Sbjct: 242 WCLALRPSDRPTFEEIQNHPW 262
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 99 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 158
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 159 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 217
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 218 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 269
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 270 EEIQNHPW 277
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
+ + V I+ EY + G L +F++ ++ + + Q +R + +K+L + H DL +
Sbjct: 94 KSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAAR 153
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NILI +N + K++DFG ++ L + + + +G + + APE +A + + +D+WS
Sbjct: 154 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSY 213
Query: 225 GVLVFEAL-FGHAPY 238
G++++E + +G PY
Sbjct: 214 GIVMWEVVSYGERPY 228
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
V ++ E+ D DL +++ L + +RQ + L FL N + H DLKP+NIL
Sbjct: 86 VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL 144
Query: 173 IKN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ + T+KLADFG A+ + + + Y APE+L S Y D+WS+G +F
Sbjct: 145 VTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGC-IFAE 203
Query: 232 LFGHAPYASCN 242
+F P N
Sbjct: 204 MFRRKPLFCGN 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YI+ EY G L ++RS + L +F + A+++L NN H DL +N+L
Sbjct: 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 134
Query: 173 I-KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ ++N K++DFG + + D+ + + APE L ++ K+D+WS G+L++E
Sbjct: 135 VSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
Query: 232 L-FGHAPY 238
FG PY
Sbjct: 193 YSFGRVPY 200
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 84 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 143
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 144 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 202
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 203 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 254
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 255 EEIQNHPW 262
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 98 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 157
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 158 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 216
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 217 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 268
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 269 EEIQNHPW 276
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 118 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 177
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 178 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 236
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 237 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 288
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 289 EEIQNHPW 296
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+YI+ EY G L +++RSH K L Q + + + FL + H DL +N L+
Sbjct: 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV 137
Query: 174 KNN-TLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
+ +K++DFG +++ +DQ S G+ + APE+ Y++K+D+W+ G+L++
Sbjct: 138 DRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMW 196
Query: 230 EAL-FGHAPY 238
E G PY
Sbjct: 197 EVFSLGKMPY 206
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 98 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 157
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 158 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 216
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 217 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSXECQHLIRWCLALRPSDRPTF 268
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 269 EEIQNHPW 276
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 99 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 158
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 159 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 217
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 218 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSXECQHLIRWCLALRPSDRPTF 269
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 270 EEIQNHPW 277
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 111 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 170
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 171 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 229
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 230 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 281
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 282 EEIQNHPW 289
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 98 VYLV-THLMGADLNNIVKC-AKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 155
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DFG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 156 EDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 273
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 131 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 190
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 191 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 249
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 250 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSXECQHLIRWCLALRPSDRPTF 301
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 302 EEIQNHPW 309
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 126 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 185
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 186 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 244
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 245 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 296
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 297 EEIQNHPW 304
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 98 AGLSN-LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKF 155
+G S +R + +RP +ILE + DL FI L E + F Q++ A++
Sbjct: 93 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 156 LRENNVCHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
V H D+K +NILI N LKL DFG L D G+ +Y PE +
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYH 211
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
Y+ + A +WSLG+L+++ + G P+ + +R Q +S +C +
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSXECQHLIR 263
Query: 273 RLLQKDPMRRISYEDLFSHPY 293
L P R ++E++ +HP+
Sbjct: 264 WCLALRPSDRPTFEEIQNHPW 284
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 117/280 (41%), Gaps = 47/280 (16%)
Query: 58 RYGELQYDTVQNSQIRLG--TVKYSQVRYDTITSH--SEFERPRAGLSNLRAPEGRK--- 110
+ GE Y V ++ +L V ++R DT T S R + L L P K
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 111 ---RPRYVYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFD 165
+Y++ E+ D DL F+ + + + ++ QL+ L F + V H D
Sbjct: 73 VIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 166 LKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKA-DLW 222
LKPQN+LI +KLADFG A+ F P + Y APEIL G Y + A D+W
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 223 SLGVLVFEALFGHAPY-ASCNLSQL-------------RAQALSSAP------------- 255
SLG + E + A + + QL ++S P
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 256 --ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+PP L D LS++L DP +RIS + +HP+
Sbjct: 252 FSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 17/138 (12%)
Query: 114 YVYIILEYCDGGDLCSFIRSHEKLSEFQ---CQQFVRQLVLALKFLRENNVCHFDLKPQN 170
Y+YI ++ C +L ++ L + + C Q+ A++FL + H DLKP N
Sbjct: 135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN 194
Query: 171 ILIK-NNTLKLADFGFAQFLAPNDQGDSI-------------QGSPLYMAPEILAGSPYN 216
I ++ +K+ DFG + +++ ++ G+ LYM+PE + G+ Y+
Sbjct: 195 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYS 254
Query: 217 AKADLWSLGVLVFEALFG 234
K D++SLG+++FE L+
Sbjct: 255 HKVDIFSLGLILFELLYS 272
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ D+G A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 103 LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNV 161
+R + +RP +ILE + DL FI L E + F Q++ A++ V
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 178
Query: 162 CHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK- 218
H D+K +NILI N LKL DFG L D G+ +Y PE + Y+ +
Sbjct: 179 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRS 237
Query: 219 ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKD 278
A +WSLG+L+++ + G P+ + +R Q +S +C + L
Sbjct: 238 AAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSSECQHLIRWCLALR 289
Query: 279 PMRRISYEDLFSHPY 293
P R ++E++ +HP+
Sbjct: 290 PSDRPTFEEIQNHPW 304
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 222 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 281
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 282 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 126 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 185
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 186 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 244
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + +R Q +S +C + L P R ++
Sbjct: 245 ILLYDMVCGDIPFEH-DEEIIRGQVFFR-------QRVSXECQHLIRWCLALRPSDRPTF 296
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 297 EEIQNHPW 304
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK--LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
V ++ E+ D DL +++ L + +RQ + L FL N + H DLKP+NIL
Sbjct: 86 VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL 144
Query: 173 IKN-NTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ + T+KLADFG A+ + + + Y APE+L S Y D+WS+G +F
Sbjct: 145 VTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGC-IFAE 203
Query: 232 LFGHAPYASCN 242
+F P N
Sbjct: 204 MFRRKPLFCGN 214
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D + L +MAPE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRV 235
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Query: 100 LSNLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEK---LSEFQCQQFVRQLVLALKFL 156
+ L A E R+ +I+E+C G L + + L E + +R +V + L
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 157 RENNVCHFDLKPQNIL-----IKNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILA 211
REN + H ++KP NI+ + KL DFG A+ L ++Q S+ G+ Y+ P++
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE 188
Query: 212 GS--------PYNAKADLWSLGVLVFEALFGHAPY 238
+ Y A DLWS+GV + A G P+
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 21/144 (14%)
Query: 115 VYIILEYCDGGDLCSFIR--------------SHEKLSEFQCQQFVRQLVLALKFLRENN 160
V +I EYC GDL +F+R ++ LS F Q+ + FL N
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN 184
Query: 161 VCHFDLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILAGSPY 215
H D+ +N+L+ N + K+ DFG A+ + ND ++G+ P+ +MAPE + Y
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 216 NAKADLWSLGVLVFEAL-FGHAPY 238
++D+WS G+L++E G PY
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII E+ G L F++S E K + F Q+ + F+ + N H DL+ NIL
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 310
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFE 230
+ + + K+ADFG A+ A P+ + APE + + K+D+WS G+L+ E
Sbjct: 311 VSASLVCKIADFGLARVGAK---------FPIKWTAPEAINFGSFTIKSDVWSFGILLME 361
Query: 231 AL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYE 286
+ +G PY + ++ +AL P + + + + R + P R ++E
Sbjct: 362 IVTYGRIPYPGMSNPEV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFE 417
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 103 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 162
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 163 QKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 222
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 223 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 255
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 148 QLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND----QGDSIQGSP 202
Q+ ++FL H DL +NIL+ +NN +K+ DFG A+ + N +GD+ P
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL--P 264
Query: 203 L-YMAPEILAGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPP 260
L +MAPE + Y+ K+D+WS GVL++E G +PY + + L P
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAP 324
Query: 261 NSLSPDCMDFLSRLLQKDPMRRISYEDL 288
+P+ + +DP R + +L
Sbjct: 325 EYSTPEIYQIMLDCWHRDPKERPRFAEL 352
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 108 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 167
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 168 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 227
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 228 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 260
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 105 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 164
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 165 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 224
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 225 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 257
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Query: 111 RPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQ 169
R + V I++E+ + G L +F+R H+ + + Q +R + +++L + H DL +
Sbjct: 115 RGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAAR 174
Query: 170 NILIKNNTL-KLADFGFAQFLAPNDQGD-SIQGSPL---YMAPEILAGSPYNAKADLWSL 224
NIL+ +N + K++DFG ++ + + + + G + + APE + + + +D+WS
Sbjct: 175 NILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSY 234
Query: 225 GVLVFEAL-FGHAPY 238
G++++E + +G PY
Sbjct: 235 GIVMWEVMSYGERPY 249
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 53/283 (18%)
Query: 58 RYGELQYDTVQNSQIRLG--TVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRPRYV 115
+ GE Y V ++ +L V ++R DT T P + + + P V
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV----PSTAIREISLLKELNHPNIV 64
Query: 116 YII-LEYCDGGDLCSFIRSHEKLSEFQ------------CQQFVRQLVLALKFLRENNVC 162
++ + + + F H+ L F + ++ QL+ L F + V
Sbjct: 65 KLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 163 HFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKA- 219
H DLKPQN+LI +KLADFG A+ F P + Y APEIL G Y + A
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 220 DLWSLGVLVFEALFGHAPY-ASCNLSQL-------------RAQALSSAP---------- 255
D+WSLG + E + A + + QL ++S P
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 244
Query: 256 -----ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+PP L D LS++L DP +RIS + +HP+
Sbjct: 245 RQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ + ++ E+CD F + L + F+ QL+ L F NV H DLKPQN+L
Sbjct: 74 KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133
Query: 173 I-KNNTLKLADFGFAQ-FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVF 229
I +N LKLA+FG A+ F P + + Y P++L G+ Y+ D+WS G +
Sbjct: 134 INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 230 EALFGHAPYASCN---------------LSQLRAQALSSAP--------------ITIPP 260
E P N ++ + +++ P + + P
Sbjct: 194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP 253
Query: 261 NSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
L+ D L LL+ +P++RIS E+ HPY
Sbjct: 254 -KLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSH--EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+ I+ EY G L F++ + L Q Q+ + ++ N H DL+ NIL
Sbjct: 77 IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 136
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ N + K+ADFG A+ + N+ + QG+ + APE + K+D+WS G+L+
Sbjct: 137 VGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 195
Query: 229 FE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRISYE 286
E G PY ++ Q + PP P+ + D + + +K+P R ++E
Sbjct: 196 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE--CPESLHDLMCQCWRKEPEERPTFE 253
Query: 287 DL 288
L
Sbjct: 254 YL 255
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 132 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQFL 189
R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+ L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 190 APNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPYA--------- 239
+ S S Y APE++ G+ Y + D+WS G ++ E L G +
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 240 -----------------SCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKDPM 280
+ N ++ + + + P T P + P+ + SRLL+ P
Sbjct: 234 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYTPT 292
Query: 281 RRISYEDLFSHPYPDLIHAP 300
R++ + +H + D + P
Sbjct: 293 ARLTPLEACAHSFFDELRDP 312
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 132 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQFL 189
R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+ L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 190 APNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPYA--------- 239
+ S S Y APE++ G+ Y + D+WS G ++ E L G +
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 240 -----------------SCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKDPM 280
+ N ++ + + + P T P + P+ + SRLL+ P
Sbjct: 234 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYTPT 292
Query: 281 RRISYEDLFSHPYPDLIHAP 300
R++ + +H + D + P
Sbjct: 293 ARLTPLEACAHSFFDELRDP 312
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 132 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQFL 189
R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+ L
Sbjct: 115 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
Query: 190 APNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPYA--------- 239
+ S S Y APE++ G+ Y + D+WS G ++ E L G +
Sbjct: 175 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
Query: 240 -----------------SCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKDPM 280
+ N ++ + + + P T P + P+ + SRLL+ P
Sbjct: 235 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYTPT 293
Query: 281 RRISYEDLFSHPYPDLIHAP 300
R++ + +H + D + P
Sbjct: 294 ARLTPLEACAHSFFDELRDP 313
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 32/202 (15%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 120 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPYA------- 239
L + S S Y APE++ G+ Y + D+WS G ++ E L G +
Sbjct: 180 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 239
Query: 240 -------------------SCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKD 278
+ N ++ + + + P T P + P+ + SRLL+
Sbjct: 240 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 298
Query: 279 PMRRISYEDLFSHPYPDLIHAP 300
P R++ + +H + D + P
Sbjct: 299 PTARLTPLEACAHSFFDELRDP 320
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 124 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 184 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 63 QYDTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRP--------RY 114
+YD +Q++ + VK ++++ T +FER L +L+ K R
Sbjct: 31 RYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 88
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ +I+EY G L +++ H E++ + Q+ Q+ +++L H +L +NIL+
Sbjct: 89 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILV 148
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQG---SPLYM-APEILAGSPYNAKADLWSLGVLV 228
+N N +K+ DFG + L + + ++ SP++ APE L S ++ +D+WS GV++
Sbjct: 149 ENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 208
Query: 229 FE 230
+E
Sbjct: 209 YE 210
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 165 VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 290 SHPY 293
+HP+
Sbjct: 283 AHPF 286
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 146 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 146 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 206 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 131 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 191 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 132 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQFL 189
R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+ L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 190 APNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPYA--------- 239
+ S S Y APE++ G+ Y + D+WS G ++ E L G +
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 240 -----------------SCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKDPM 280
+ N ++ + + + P T P + P+ + SRLL+ P
Sbjct: 234 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYTPT 292
Query: 281 RRISYEDLFSHPYPDLIHAP 300
R++ + +H + D + P
Sbjct: 293 ARLTPLEACAHSFFDELRDP 312
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 132 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQFL 189
R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+ L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 190 APNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
+ S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 132 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQFL 189
R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+ L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 190 APNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPYA--------- 239
+ S S Y APE++ G+ Y + D+WS G ++ E L G +
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 240 -----------------SCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKDPM 280
+ N ++ + + + P T P + P+ + SRLL+ P
Sbjct: 234 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYTPT 292
Query: 281 RRISYEDLFSHPYPDLIHAP 300
R++ + +H + D + P
Sbjct: 293 ARLTPLEACAHSFFDELRDP 312
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 32/202 (15%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 124 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPYA------- 239
L + S S Y APE++ G+ Y + D+WS G ++ E L G +
Sbjct: 184 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 243
Query: 240 -------------------SCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKD 278
+ N ++ + + + P T P + P+ + SRLL+
Sbjct: 244 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 302
Query: 279 PMRRISYEDLFSHPYPDLIHAP 300
P R++ + +H + D + P
Sbjct: 303 PTARLTPLEACAHSFFDELRDP 324
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 148 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 208 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 150 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 210 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 132 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQFL 189
R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+ L
Sbjct: 118 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
Query: 190 APNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPYA--------- 239
+ S S Y APE++ G+ Y + D+WS G ++ E L G +
Sbjct: 178 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 237
Query: 240 -----------------SCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKDPM 280
+ N ++ + + + P T P + P+ + SRLL+ P
Sbjct: 238 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYTPT 296
Query: 281 RRISYEDLFSHPYPDLIHAP 300
R++ + +H + D + P
Sbjct: 297 ARLTPLEACAHSFFDELRDP 316
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 30/153 (19%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSE----FQCQQ------------------FVRQLVL 151
+Y+I EYC GDL +++RS EK SE ++ Q+ F Q+
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 152 ALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGS---PL-YMA 206
++FL + H DL +N+L+ + +K+ DFG A+ + +D ++G+ P+ +MA
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM-SDSNYVVRGNARLPVKWMA 242
Query: 207 PEILAGSPYNAKADLWSLGVLVFEAL-FGHAPY 238
PE L Y K+D+WS G+L++E G PY
Sbjct: 243 PESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 105 IKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 290 SHPY 293
+HP+
Sbjct: 283 AHPF 286
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 132 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQFL 189
R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+ L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 190 APNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGHAPYA--------- 239
+ S S Y APE++ G+ Y + D+WS G ++ E L G +
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 240 -----------------SCNLSQLRAQALSSAPIT--IPPNSLSPDCMDFLSRLLQKDPM 280
+ N ++ + + + P T P + P+ + SRLL+ P
Sbjct: 234 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYTPT 292
Query: 281 RRISYEDLFSHPYPDLIHAP 300
R++ + +H + D + P
Sbjct: 293 ARLTPLEACAHSFFDELRDP 312
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHE--KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+YII E+ G L F++S E K+ + F Q+ + ++ N H DL+ N+L
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 141
Query: 173 IKNNTL-KLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
+ + + K+ADFG A+ + N+ + +G+ + APE + + K+++WS G+L+
Sbjct: 142 VSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILL 200
Query: 229 FEAL-FGHAPY 238
+E + +G PY
Sbjct: 201 YEIVTYGKIPY 211
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 137 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND-- 193
L C F Q+ ++FL H DL +NIL+ + N +K+ DFG A+ + +
Sbjct: 190 LEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 194 --QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQ 249
+GD+ PL +MAPE + Y ++D+WS GVL++E G +PY + + +
Sbjct: 248 VRKGDA--RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 305
Query: 250 ALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
L P+ +P+ + +P +R ++ +L H
Sbjct: 306 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 117 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 177 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 290 SHPY 293
+HP+
Sbjct: 283 AHPF 286
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 290 SHPY 293
+HP+
Sbjct: 283 AHPF 286
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 290 SHPY 293
+HP+
Sbjct: 282 AHPF 285
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 191 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 251 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 225
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 226 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 290 SHPY 293
+HP+
Sbjct: 284 AHPF 287
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 125 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 185 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 130 FIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQ 187
+ R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+
Sbjct: 140 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
L + S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 200 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 290 SHPY 293
+HP+
Sbjct: 282 AHPF 285
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 165
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 225
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 226 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 290 SHPY 293
+HP+
Sbjct: 284 AHPF 287
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++R+ E+++ QL +++L
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +++ADFG A+ + D L +MAPE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ FG A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 112 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 171
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 172 VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 231
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 232 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 289
Query: 290 SHPY 293
+HP+
Sbjct: 290 AHPF 293
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 290 SHPY 293
+HP+
Sbjct: 283 AHPF 286
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 290 SHPY 293
+HP+
Sbjct: 283 AHPF 286
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 132 RSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNT--LKLADFGFAQFL 189
R+ + L + ++ QL +L ++ +CH D+KPQN+L+ +T LKL DFG A+ L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 190 APNDQGDSIQGSPLYMAPEILAGSP-YNAKADLWSLGVLVFEALFGH 235
+ S S Y APE++ G+ Y + D+WS G ++ E L G
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 290 SHPY 293
+HP+
Sbjct: 282 AHPF 285
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 290 SHPY 293
+HP+
Sbjct: 283 AHPF 286
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 290 SHPY 293
+HP+
Sbjct: 283 AHPF 286
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 137 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND-- 193
L C F Q+ ++FL H DL +NIL+ + N +K+ DFG A+ + +
Sbjct: 192 LEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 194 --QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQ 249
+GD+ PL +MAPE + Y ++D+WS GVL++E G +PY + + +
Sbjct: 250 VRKGDA--RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 307
Query: 250 ALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
L P+ +P+ + +P +R ++ +L H
Sbjct: 308 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 225
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 226 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 290 SHPY 293
+HP+
Sbjct: 284 AHPF 287
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDL-------------CSFIRSH---EKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L SF SH E+LS Q+ +++L
Sbjct: 109 LYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ ++N +K+ADFG A+ + D L +MAPE L
Sbjct: 169 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRI 228
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 21/144 (14%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQ--------------CQQFVRQLVLALKFLRENN 160
V +I EYC GDL +F+R ++ E F Q+ + FL N
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN 184
Query: 161 VCHFDLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILAGSPY 215
H D+ +N+L+ N + K+ DFG A+ + ND ++G+ P+ +MAPE + Y
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 216 NAKADLWSLGVLVFEAL-FGHAPY 238
++D+WS G+L++E G PY
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 163
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 290 SHPY 293
+HP+
Sbjct: 282 AHPF 285
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 226
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 227 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 290 SHPY 293
+HP+
Sbjct: 285 AHPF 288
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 163
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 290 SHPY 293
+HP+
Sbjct: 282 AHPF 285
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 168
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 228
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 229 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 286
Query: 290 SHPY 293
+HP+
Sbjct: 287 AHPF 290
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 228 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 290 SHPY 293
+HP+
Sbjct: 286 AHPF 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 290 SHPY 293
+HP+
Sbjct: 283 AHPF 286
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 226
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 227 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 290 SHPY 293
+HP+
Sbjct: 285 AHPF 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 228 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 290 SHPY 293
+HP+
Sbjct: 286 AHPF 289
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 137 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND-- 193
L C F Q+ ++FL H DL +NIL+ + N +K+ DFG A+ + +
Sbjct: 199 LEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 194 --QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQ 249
+GD+ PL +MAPE + Y ++D+WS GVL++E G +PY + + +
Sbjct: 257 VRKGDA--RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 314
Query: 250 ALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
L P+ +P+ + +P +R ++ +L H
Sbjct: 315 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 168
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 228
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 229 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 286
Query: 290 SHPY 293
+HP+
Sbjct: 287 AHPF 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 228 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 290 SHPY 293
+HP+
Sbjct: 286 AHPF 289
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 226
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 227 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 290 SHPY 293
+HP+
Sbjct: 285 AHPF 288
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 137 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND-- 193
L C F Q+ ++FL H DL +NIL+ + N +K+ DFG A+ + +
Sbjct: 197 LEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 194 --QGDSIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQ 249
+GD+ PL +MAPE + Y ++D+WS GVL++E G +PY + + +
Sbjct: 255 VRKGDA--RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 312
Query: 250 ALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSH 291
L P+ +P+ + +P +R ++ +L H
Sbjct: 313 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ D G A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 112 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 171
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 172 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 231
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 232 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 289
Query: 290 SHPY 293
+HP+
Sbjct: 290 AHPF 293
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ D G A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 98 AGLSN-LRAPEGRKRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKF 155
+G S +R + +RP +ILE + DL FI L E + F Q++ A++
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 156 LRENNVCHFDLKPQNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGS 213
V H D+K +NILI N LKL DFG L D G+ +Y PE +
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYH 184
Query: 214 PYNAK-ADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLS 272
Y+ + A +WSLG+L+++ + G P+ + + Q +S +C +
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQVFFR-------QRVSSECQHLIR 236
Query: 273 RLLQKDPMRRISYEDLFSHPYPDLIHAP--CAESH 305
L P R ++E++ +HP+ + P AE H
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIH 271
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKPQN+LI +KLADFG A+ F P
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 228 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 290 SHPY 293
+HP+
Sbjct: 286 AHPF 289
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ DF A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQ---LVLALKFLRENNVCHFDLKPQNI 171
+ ++ E+ + G L ++R+ L F + + + + +L E +V H DL +N
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNC 134
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ +N +K++DFG +F+ +DQ S G+ + +PE+ + S Y++K+D+WS GVL
Sbjct: 135 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 228 VFEALF-GHAPY 238
++E G PY
Sbjct: 194 MWEVFSEGKIPY 205
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
VY++ + G DL + ++ +KL++ Q + Q++ LK++ ++ H DLKP N+ +
Sbjct: 102 VYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 159
Query: 175 NN-TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEI-LAGSPYNAKADLWSLGVLVFEAL 232
+ LK+ D G A+ +D+ + Y APEI L YN D+WS+G ++ E L
Sbjct: 160 EDCELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 233 FGHAPYASCN-LSQLR-------------------------AQALSSAPITIPPNSL--- 263
G + + + QL+ Q+L+ P N
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 264 SPDCMDFLSRLLQKDPMRRISYEDLFSHPYPDLIHAPCAE 303
+P +D L ++L D +RI+ +H Y H P E
Sbjct: 278 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++++ E+LS Q+ +++L
Sbjct: 101 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 160
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ ++N +K+ADFG A+ + D L +MAPE L
Sbjct: 161 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 220
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 221 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 253
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 111 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 170
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 171 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 229
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + + Q +S +C + L P R ++
Sbjct: 230 ILLYDMVCGDIPFEH-DEEIIGGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 281
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 282 EEIQNHPW 289
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK----------LSEFQCQQFVRQLVLALKFLRENNVCHF 164
V +I EYC GDL +F+R + L F Q+ + FL N H
Sbjct: 125 VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 184
Query: 165 DLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILAGSPYNAKA 219
D+ +N+L+ N + K+ DFG A+ + ND ++G+ P+ +MAPE + Y ++
Sbjct: 185 DVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 243
Query: 220 DLWSLGVLVFEAL-FGHAPY 238
D+WS G+L++E G PY
Sbjct: 244 DVWSYGILLWEIFSLGLNPY 263
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 112 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 171
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 172 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 230
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + + Q +S +C + L P R ++
Sbjct: 231 ILLYDMVCGDIPFEH-DEEIIGGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 282
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 283 EEIQNHPW 290
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++++ E+LS Q+ +++L
Sbjct: 98 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 157
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ ++N +K+ADFG A+ + D L +MAPE L
Sbjct: 158 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 217
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 218 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 250
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 112 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 171
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 172 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 230
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + + Q +S +C + L P R ++
Sbjct: 231 ILLYDMVCGDIPFEH-DEEIIGGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 282
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 283 EEIQNHPW 290
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++++ E+LS Q+ +++L
Sbjct: 109 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ ++N +K+ADFG A+ + D L +MAPE L
Sbjct: 169 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++++ E+LS Q+ +++L
Sbjct: 102 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 161
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ ++N +K+ADFG A+ + D L +MAPE L
Sbjct: 162 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 221
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 222 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 254
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 100 LSNLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHEK---LSEFQCQQFVRQLVLALKFL 156
+ L A E R+ +I+E+C G L + + L E + +R +V + L
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 157 RENNVCHFDLKPQNIL-----IKNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILA 211
REN + H ++KP NI+ + KL DFG A+ L ++Q + G+ Y+ P++
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYE 188
Query: 212 GS--------PYNAKADLWSLGVLVFEALFGHAPY 238
+ Y A DLWS+GV + A G P+
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKP+N+LI +KLADFG A+ F P
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 225
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 226 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 290 SHPY 293
+HP+
Sbjct: 284 AHPF 287
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 111 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 170
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 171 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 229
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + + Q +S +C + L P R ++
Sbjct: 230 ILLYDMVCGDIPFEH-DEEIIGGQVFFR-------QRVSSECQHLIRWCLALRPSDRPTF 281
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 282 EEIQNHPW 289
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 112 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 171
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 172 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 230
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + + Q +S +C + L P R ++
Sbjct: 231 ILLYDMVCGDIPFEH-DEEIIGGQVFFR-------QRVSXECQHLIRWCLALRPSDRPTF 282
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 283 EEIQNHPW 290
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 53/283 (18%)
Query: 58 RYGELQYDTVQNSQIRLG--TVKYSQVRYDTITSHSEFERPRAGLSNLRAPEGRKRPRYV 115
+ GE Y V ++ +L V ++R DT T P + + + P V
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV----PSTAIREISLLKELNHPNIV 65
Query: 116 YII-LEYCDGGDLCSFIRSHEKLSEFQ------------CQQFVRQLVLALKFLRENNVC 162
++ + + + F H+ L +F + ++ QL+ L F + V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 163 HFDLKPQNILIKNN-TLKLADFGFAQ-FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKA- 219
H DLKP+N+LI +KLADFG A+ F P + Y APEIL G Y + A
Sbjct: 126 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 220 DLWSLGVLVFEALFGHAPY-ASCNLSQL-------------RAQALSSAP---------- 255
D+WSLG + E + A + + QL ++S P
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 245
Query: 256 -----ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
+PP L D LS++L DP +RIS + +HP+
Sbjct: 246 RQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++++ E+LS Q+ +++L
Sbjct: 109 LYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ ++N +K+ADFG A+ + D L +MAPE L
Sbjct: 169 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK----------LSEFQCQQFVRQLVLALKFLRENNVCHF 164
V +I EYC GDL +F+R + L F Q+ + FL N H
Sbjct: 117 VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 176
Query: 165 DLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGS---PL-YMAPEILAGSPYNAKA 219
D+ +N+L+ N + K+ DFG A+ + ND ++G+ P+ +MAPE + Y ++
Sbjct: 177 DVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 235
Query: 220 DLWSLGVLVFEAL-FGHAPY 238
D+WS G+L++E G PY
Sbjct: 236 DVWSYGILLWEIFSLGLNPY 255
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 112 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 171
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 172 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 230
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + + Q +S +C + L P R ++
Sbjct: 231 ILLYDMVCGDIPFEH-DEEIIGGQVFFR-------QRVSXECQHLIRWCLALRPSDRPTF 282
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 283 EEIQNHPW 290
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 110 KRPRYVYIILEYCDG-GDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+RP +ILE + DL FI L E + F Q++ A++ V H D+K
Sbjct: 111 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 170
Query: 169 QNILIKNN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK-ADLWSLG 225
+NILI N LKL DFG L D G+ +Y PE + Y+ + A +WSLG
Sbjct: 171 ENILIDLNRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRYHGRSAAVWSLG 229
Query: 226 VLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISY 285
+L+++ + G P+ + + Q +S +C + L P R ++
Sbjct: 230 ILLYDMVCGDIPFEH-DEEIIGGQVFFR-------QRVSXECQHLIRWCLALRPSDRPTF 281
Query: 286 EDLFSHPY 293
E++ +HP+
Sbjct: 282 EEIQNHPW 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKP+N+LI +KLADFG A+ F P
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 226
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 227 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 290 SHPY 293
+HP+
Sbjct: 285 AHPF 288
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++++ E+LS Q+ +++L
Sbjct: 109 LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ ++N +K+ADFG A+ + D L +MAPE L
Sbjct: 169 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+ Y G+L ++R+ E+++ QL +++L
Sbjct: 116 LYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKP+N+LI +KLADFG A+ F P
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 225
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 226 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 290 SHPY 293
+HP+
Sbjct: 284 AHPF 287
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++++ E+LS Q+ +++L
Sbjct: 94 LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 153
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ ++N +K+ADFG A+ + D L +MAPE L
Sbjct: 154 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 213
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 115 VYIILEYC--DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y++ ++C D L S + LSE + + ++ L+ L ++ N + H D+K N+L
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 173 I-KNNTLKLADFGFAQF--LAPNDQGDSIQG---SPLYMAPEILAGS-PYNAKADLWSLG 225
I ++ LKLADFG A+ LA N Q + + Y PE+L G Y DLW G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 226 VLVFEALFGHAPYASCNLSQ----LRAQALSSAPITIPPN-------------------- 261
++ E ++ +P N Q L +Q S + PN
Sbjct: 218 CIMAE-MWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKV 276
Query: 262 -------SLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
P +D + +LL DP +RI +D +H +
Sbjct: 277 KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+EY G+L ++++ E+LS Q+ +++L
Sbjct: 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 209
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ ++N +K+ADFG A+ + D L +MAPE L
Sbjct: 210 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 269
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 142 CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQ-FLAPNDQGDSIQ 199
+ ++ QL+ L F + V H DLKP+N+LI +KLADFG A+ F P
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 200 GSPLYMAPEILAGSPYNAKA-DLWSLGVLVFEALFGHAPY-ASCNLSQL----------- 246
+ Y APEIL G Y + A D+WSLG + E + A + + QL
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 247 --RAQALSSAP---------------ITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLF 289
++S P +PP L D LS++L DP +RIS +
Sbjct: 228 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 290 SHPY 293
+HP+
Sbjct: 286 AHPF 289
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVC---HFDLKPQNILI 173
+++E+ GG L + + S +++ + Q+ + +L + + H DLK NILI
Sbjct: 83 LVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
Query: 174 ---------KNNTLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSL 224
N LK+ DFG A+ + S G+ +MAPE++ S ++ +D+WS
Sbjct: 142 LQKVENGDLSNKILKITDFGLAREWHRTTKM-SAAGAYAWMAPEVIRASMFSKGSDVWSY 200
Query: 225 GVLVFEALFGHAPYASCN-LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQK----DP 279
GVL++E L G P+ + L+ A++ + IP C + ++L++ DP
Sbjct: 201 GVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPST-----CPEPFAKLMEDCWNPDP 255
Query: 280 MRRISYEDLFSH 291
R S+ ++
Sbjct: 256 HSRPSFTNILDQ 267
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 6/136 (4%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++ +Y G L +R H L + Q+ + +L E+ + H +L +N+L+K+
Sbjct: 109 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS 168
Query: 176 -NTLKLADFGFAQFLAPNDQGD--SIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ +++ADFG A L P+D+ S +P+ +MA E + Y ++D+WS GV V+E
Sbjct: 169 PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 228
Query: 232 L-FGHAPYASCNLSQL 246
+ FG PYA L+++
Sbjct: 229 MTFGAEPYAGLRLAEV 244
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 6/136 (4%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++ +Y G L +R H L + Q+ + +L E+ + H +L +N+L+K+
Sbjct: 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS 150
Query: 176 -NTLKLADFGFAQFLAPNDQGD--SIQGSPL-YMAPEILAGSPYNAKADLWSLGVLVFEA 231
+ +++ADFG A L P+D+ S +P+ +MA E + Y ++D+WS GV V+E
Sbjct: 151 PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 210
Query: 232 L-FGHAPYASCNLSQL 246
+ FG PYA L+++
Sbjct: 211 MTFGAEPYAGLRLAEV 226
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 115 VYIILEYC--DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y++ ++C D L S + LSE + + ++ L+ L ++ N + H D+K N+L
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 173 I-KNNTLKLADFGFAQF--LAPNDQGDSIQG---SPLYMAPEILAGS-PYNAKADLWSLG 225
I ++ LKLADFG A+ LA N Q + + Y PE+L G Y DLW G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 226 VLVFEALFGHAPYASCNLSQ----LRAQALSSAPITIPPN-------------------- 261
++ E ++ +P N Q L +Q S + PN
Sbjct: 218 CIMAE-MWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKV 276
Query: 262 -------SLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
P +D + +LL DP +RI +D +H +
Sbjct: 277 KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQ---LVLALKFLRENNVCHFDLKPQNI 171
+ ++ E+ + G L ++R+ L F + + + + +L E V H DL +N
Sbjct: 75 ICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNC 132
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ +N +K++DFG +F+ +DQ S G+ + +PE+ + S Y++K+D+WS GVL
Sbjct: 133 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 191
Query: 228 VFEALF-GHAPY 238
++E G PY
Sbjct: 192 MWEVFSEGKIPY 203
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 115 VYIILEYCDGGDLCSFIRS----------------HEKLSEFQCQQFVRQLVLALKFLRE 158
+Y+I+ Y G+L ++R+ E+++ QL +++L
Sbjct: 116 LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 159 NNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSP 214
H DL +N+L+ +NN +K+ADFG A+ + D L +MAPE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 215 YNAKADLWSLGVLVFEAL-FGHAPYASCNLSQL 246
Y ++D+WS GVL++E G +PY + +L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 115 VYIILEYC--DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y++ ++C D L S + LSE + + ++ L+ L ++ N + H D+K N+L
Sbjct: 99 IYLVFDFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIHRNKILHRDMKAANVL 156
Query: 173 I-KNNTLKLADFGFAQF--LAPNDQGDSIQG---SPLYMAPEILAGS-PYNAKADLWSLG 225
I ++ LKLADFG A+ LA N Q + + Y PE+L G Y DLW G
Sbjct: 157 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 216
Query: 226 VLVFEALFGHAPYASCNLSQ----LRAQALSSAPITIPPN-------------------- 261
++ E ++ +P N Q L +Q S + PN
Sbjct: 217 CIMAE-MWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKV 275
Query: 262 -------SLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
P +D + +LL DP +RI +D +H +
Sbjct: 276 KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 115 VYIILEYC--DGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNIL 172
+Y++ ++C D L S + LSE + + ++ L+ L ++ N + H D+K N+L
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVKFTLSEIK--RVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 173 I-KNNTLKLADFGFAQF--LAPNDQGDSIQG---SPLYMAPEILAGS-PYNAKADLWSLG 225
I ++ LKLADFG A+ LA N Q + + Y PE+L G Y DLW G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 226 VLVFEALFGHAPYASCNLSQ----LRAQALSSAPITIPPN-------------------- 261
++ E ++ +P N Q L +Q S + PN
Sbjct: 218 CIMAE-MWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKV 276
Query: 262 -------SLSPDCMDFLSRLLQKDPMRRISYEDLFSHPY 293
P +D + +LL DP +RI +D +H +
Sbjct: 277 KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQ---LVLALKFLRENNVCHFDLKPQNI 171
+ ++ E+ + G L ++R+ L F + + + + +L E V H DL +N
Sbjct: 80 ICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNC 137
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ +N +K++DFG +F+ +DQ S G+ + +PE+ + S Y++K+D+WS GVL
Sbjct: 138 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 196
Query: 228 VFEALF-GHAPY 238
++E G PY
Sbjct: 197 MWEVFSEGKIPY 208
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQ---LVLALKFLRENNVCHFDLKPQNI 171
+ ++ E+ + G L ++R+ L F + + + + +L E V H DL +N
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNC 134
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ +N +K++DFG +F+ +DQ S G+ + +PE+ + S Y++K+D+WS GVL
Sbjct: 135 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 228 VFEALF-GHAPY 238
++E G PY
Sbjct: 194 MWEVFSEGKIPY 205
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQ---LVLALKFLRENNVCHFDLKPQNI 171
+ ++ E+ + G L ++R+ L F + + + + +L E V H DL +N
Sbjct: 97 ICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNC 154
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ +N +K++DFG +F+ +DQ S G+ + +PE+ + S Y++K+D+WS GVL
Sbjct: 155 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 213
Query: 228 VFEALF-GHAPY 238
++E G PY
Sbjct: 214 MWEVFSEGKIPY 225
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 143 QQFVRQLVLALKFLR--ENNVCHFDLKPQNILI---KNNTLKLADFGFAQFLAPNDQGDS 197
++F +Q+ AL FL E ++ H DLKP+NIL+ K + +K+ DFG + L
Sbjct: 141 RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QX 199
Query: 198 IQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPIT 257
IQ S Y +PE+L G PY+ D+WSLG ++ E G ++ N + + +
Sbjct: 200 IQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV--LG 256
Query: 258 IPPNSL---SPDCMDFLSRL 274
IPP + +P F +L
Sbjct: 257 IPPAHILDQAPKARKFFEKL 276
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQ---LVLALKFLRENNVCHFDLKPQNI 171
+ ++ E+ + G L ++R+ L F + + + + +L E V H DL +N
Sbjct: 78 ICLVTEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNC 135
Query: 172 LI-KNNTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVL 227
L+ +N +K++DFG +F+ +DQ S G+ + +PE+ + S Y++K+D+WS GVL
Sbjct: 136 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 228 VFEALF-GHAPY 238
++E G PY
Sbjct: 195 MWEVFSEGKIPY 206
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 143 QQFVRQLVLALKFLR--ENNVCHFDLKPQNILI---KNNTLKLADFGFAQFLAPNDQGDS 197
++F +Q+ AL FL E ++ H DLKP+NIL+ K + +K+ DFG + L
Sbjct: 160 RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QX 218
Query: 198 IQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPIT 257
IQ S Y +PE+L G PY+ D+WSLG ++ E G ++ N ++ +
Sbjct: 219 IQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN--EVDQMNKIVEVLG 275
Query: 258 IPPNSL---SPDCMDFLSRL 274
IPP + +P F +L
Sbjct: 276 IPPAHILDQAPKARKFFEKL 295
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 92 VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 151
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 152 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 211
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 212 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 244
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 101/234 (43%), Gaps = 32/234 (13%)
Query: 86 TITSHSEFERPRAGLSNLRAPE--------GRKRPRYVYIILEYCDGGDLCSFIRSHE-- 135
T+ + +F+R L+NL+ G P + ++ EY GDL F+R+H
Sbjct: 57 TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP--LIMVFEYMKHGDLNKFLRAHGPD 114
Query: 136 --------------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKNNTL-KL 180
+L Q Q+ + +L + H DL +N L+ N L K+
Sbjct: 115 AMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKI 174
Query: 181 ADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEAL-FGHA 236
DFG ++ + D G +M PE + + ++D+WS GV+++E +G
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
Query: 237 PYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRISYEDLFS 290
P+ + +++ + ++ + P + D + Q++P +R++ ++++
Sbjct: 235 PWFQLSNTEV-IECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 143 QQFVRQLVLALKFLR--ENNVCHFDLKPQNILI---KNNTLKLADFGFAQFLAPNDQGDS 197
++F +Q+ AL FL E ++ H DLKP+NIL+ K +K+ DFG + L
Sbjct: 160 RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIY-QX 218
Query: 198 IQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPIT 257
IQ S Y +PE+L G PY+ D+WSLG ++ E G ++ N ++ +
Sbjct: 219 IQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN--EVDQMNKIVEVLG 275
Query: 258 IPPNSL---SPDCMDFLSRL 274
IPP + +P F +L
Sbjct: 276 IPPAHILDQAPKARKFFEKL 295
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 21/135 (15%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQ---FVRQLVLALKFLRENNVCHFDLKPQNILI 173
I EY GG L I+S + S++ Q F + + + +L N+ H DL N L+
Sbjct: 84 FITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV 141
Query: 174 K-NNTLKLADFGFAQFLA--------------PNDQGD-SIQGSPLYMAPEILAGSPYNA 217
+ N + +ADFG A+ + P+ + ++ G+P +MAPE++ G Y+
Sbjct: 142 RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE 201
Query: 218 KADLWSLGVLVFEAL 232
K D++S G+++ E +
Sbjct: 202 KVDVFSFGIVLCEII 216
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 13/136 (9%)
Query: 110 KRPRYVYIILEY-CDGGDLCSFIRS--HEKLSEFQCQQFVRQLVLALKFL-RENNVCHFD 165
K P V++++ + G +L + I+ H + +Q +QL+L L ++ R + H D
Sbjct: 98 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTD 157
Query: 166 LKPQNILIK-----NN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK 218
+KP+N+L++ N +K+AD G A + + +SIQ Y +PE+L G+P+
Sbjct: 158 IKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-YTNSIQTRE-YRSPEVLLGAPWGCG 215
Query: 219 ADLWSLGVLVFEALFG 234
AD+WS L+FE + G
Sbjct: 216 ADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 63/243 (25%)
Query: 110 KRPRYVYIILEY-CDGGDLCSFIRS--HEKLSEFQCQQFVRQLVLALKFL-RENNVCHFD 165
K P V++++ + G +L + I+ H + +Q +QL+L L ++ R + H D
Sbjct: 98 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTD 157
Query: 166 LKPQNILIK-----NN--TLKLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAK 218
+KP+N+L++ N +K+AD G A + + +SIQ Y +PE+L G+P+
Sbjct: 158 IKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-YTNSIQTRE-YRSPEVLLGAPWGCG 215
Query: 219 ADLWSLGVLVFE---------------------------ALFGHAP--------YASC-- 241
AD+WS L+FE L G P Y
Sbjct: 216 ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFF 275
Query: 242 -------NLSQLRAQALSSAPITIPPNSLSPD----CMDFLSRLLQKDPMRRISYEDLFS 290
N+S+L+ L + S D DFLS +LQ DP +R L +
Sbjct: 276 NSRGLLRNISKLKFWPLED--VLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333
Query: 291 HPY 293
HP+
Sbjct: 334 HPW 336
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 64/208 (30%)
Query: 148 QLVLALKFLRENNVCHFDLKPQNIL--------------------IKNNTLKLADFGFAQ 187
QL AL+FL EN + H DLKP+NIL +KN ++++ADFG A
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 222
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGH------------ 235
F ++ +I + Y PE++ + D+WS+G ++FE G
Sbjct: 223 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 236 -------APYASCNLSQLRAQA-LSSAPITIPPNS-----LSPDC--------------- 267
P S + + R Q + NS + +C
Sbjct: 281 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 340
Query: 268 --MDFLSRLLQKDPMRRISYEDLFSHPY 293
D + R+L+ DP +RI+ + HP+
Sbjct: 341 QLFDLMRRMLEFDPAQRITLAEALLHPF 368
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 64/208 (30%)
Query: 148 QLVLALKFLRENNVCHFDLKPQNIL--------------------IKNNTLKLADFGFAQ 187
QL AL+FL EN + H DLKP+NIL +KN ++++ADFG A
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 199
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGH------------ 235
F ++ +I + Y PE++ + D+WS+G ++FE G
Sbjct: 200 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 236 -------APYASCNLSQLRAQA-LSSAPITIPPNS-----LSPDC--------------- 267
P S + + R Q + NS + +C
Sbjct: 258 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 317
Query: 268 --MDFLSRLLQKDPMRRISYEDLFSHPY 293
D + R+L+ DP +RI+ + HP+
Sbjct: 318 QLFDLMRRMLEFDPAQRITLAEALLHPF 345
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG AQ + +G +M PE + +K D
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 230 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 288
Query: 281 RRISY 285
R ++
Sbjct: 289 DRPNF 293
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 64/208 (30%)
Query: 148 QLVLALKFLRENNVCHFDLKPQNIL--------------------IKNNTLKLADFGFAQ 187
QL AL+FL EN + H DLKP+NIL +KN ++++ADFG A
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGH------------ 235
F ++ +I + Y PE++ + D+WS+G ++FE G
Sbjct: 191 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 236 -------APYASCNLSQLRAQA-LSSAPITIPPNS-----LSPDC--------------- 267
P S + + R Q + NS + +C
Sbjct: 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308
Query: 268 --MDFLSRLLQKDPMRRISYEDLFSHPY 293
D + R+L+ DP +RI+ + HP+
Sbjct: 309 QLFDLMRRMLEFDPAQRITLAEALLHPF 336
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 19/194 (9%)
Query: 114 YVYIILEYCDGGDLCSFIR----------------SHEKLSEFQCQQFVRQLVLALKFLR 157
Y+Y+ +EY G+L F+R + LS Q F + + +L
Sbjct: 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 159
Query: 158 ENNVCHFDLKPQNILIKNNTL-KLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYN 216
+ H DL +NIL+ N + K+ADFG ++ + + +MA E L S Y
Sbjct: 160 QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT 219
Query: 217 AKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL 275
+D+WS GVL++E + G PY ++L + + P N + D + +
Sbjct: 220 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC-DDEVYDLMRQCW 278
Query: 276 QKDPMRRISYEDLF 289
++ P R S+ +
Sbjct: 279 REKPYERPSFAQIL 292
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 19/194 (9%)
Query: 114 YVYIILEYCDGGDLCSFIR----------------SHEKLSEFQCQQFVRQLVLALKFLR 157
Y+Y+ +EY G+L F+R + LS Q F + + +L
Sbjct: 90 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 149
Query: 158 ENNVCHFDLKPQNILIKNNTL-KLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYN 216
+ H DL +NIL+ N + K+ADFG ++ + + +MA E L S Y
Sbjct: 150 QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT 209
Query: 217 AKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL 275
+D+WS GVL++E + G PY ++L + + P N + D + +
Sbjct: 210 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC-DDEVYDLMRQCW 268
Query: 276 QKDPMRRISYEDLF 289
++ P R S+ +
Sbjct: 269 REKPYERPSFAQIL 282
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 113 RYVYIILEYCDGGDLCSFIRSHE---------KLSEFQCQQFVRQLVLALKFLRENNVCH 163
R V+++ +Y + DL I+ H +L + + Q++ + +L N V H
Sbjct: 93 RKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLH 151
Query: 164 FDLKPQNILI-----KNNTLKLADFGFAQF----LAPNDQGDSIQGSPLYMAPEILAGSP 214
DLKP NIL+ + +K+AD GFA+ L P D + + Y APE+L G+
Sbjct: 152 RDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGAR 211
Query: 215 YNAKA-DLWSLGVLVFEALFGHAPYASCNLSQLRA 248
+ KA D+W++G +F L P C ++
Sbjct: 212 HYTKAIDIWAIGC-IFAELLTSEPIFHCRQEDIKT 245
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 93 VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 153 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 212
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 213 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 117 IILEYCDGGDLCSFIRSH-------------EKLSEFQCQQFVRQLVLALKFLRENNVCH 163
++ EY GDL F+R+H +L++ Q +Q+ + +L + H
Sbjct: 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVH 151
Query: 164 FDLKPQNILIKNNTL-KLADFGFAQFLAPNDQ---GDSIQGSPLYMAPEILAGSPYNAKA 219
DL +N L+ N L K+ DFG ++ + D G +M PE + + ++
Sbjct: 152 RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 211
Query: 220 DLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKD 278
D+WSLGV+++E +G P+ + +++ + ++ + P + + + + Q++
Sbjct: 212 DVWSLGVVLWEIFTYGKQPWYQLSNNEV-IECITQGRVLQRPRTCPQEVYELMLGCWQRE 270
Query: 279 PMRR 282
P R
Sbjct: 271 PHMR 274
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 95 VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 154
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 155 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 214
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 215 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 247
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 98 VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 157
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 158 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 217
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 218 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 94 VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 153
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 154 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 213
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 214 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 92 VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 151
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 152 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 211
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 212 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 244
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 141 QCQQFVRQLVLALKFLRENNVCHFDLKPQNIL--------------------IKNNTLKL 180
Q + QL A+KFL +N + H DLKP+NIL +K+ +++
Sbjct: 138 QVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRV 197
Query: 181 ADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFG 234
DFG A F ++ +I + Y APE++ ++ D+WS+G ++FE G
Sbjct: 198 VDFGSATF--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 91 VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 151 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 211 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 91 VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 151 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 211 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +KFL H DL +N ++
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 169
Query: 176 N-TLKLADFGFAQFLAPNDQGDSIQ---GSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
T+K+ADFG A+ + + + DS+ G+ L +MA E L + K+D+WS GVL+
Sbjct: 170 KFTVKVADFGLARDML-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 228
Query: 229 FEALF-GHAPYASCN 242
+E + G PY N
Sbjct: 229 WELMTRGAPPYPDVN 243
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 37/215 (17%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI- 173
+++I EY + DL ++ + +S + F+ QL+ + F H DLKPQN+L+
Sbjct: 108 LHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLS 166
Query: 174 -----KNNTLKLADFGFAQ-FLAPNDQGDSIQGSPLYMAPEILAGS-PYNAKADLWSLGV 226
+ LK+ DFG A+ F P Q + Y PEIL GS Y+ D+WS+
Sbjct: 167 VSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIAC 226
Query: 227 LVFEALFGHAPY-ASCNLSQL-RAQALSSAP--ITIPPNSLSPDCMDFLSR--------- 273
+ E L + + QL + + P T P + PD +
Sbjct: 227 IWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRV 286
Query: 274 ---------------LLQKDPMRRISYEDLFSHPY 293
+L+ DP++RIS ++ HPY
Sbjct: 287 LGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 29/196 (14%)
Query: 48 RYDIVGSST---IRYGELQY---DTVQNSQIRLGTVKYSQVRYDTITSHSEFERPRAGLS 101
RYD +G +T + +LQ+ D ++ Q + +K HS+F G+S
Sbjct: 27 RYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK---------ALHSDFIVKYRGVS 77
Query: 102 NLRAPEGRKRPRYVYIILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENN 160
G RP + +++EY G L F++ H +L + + Q+ +++L
Sbjct: 78 Y-----GPGRPE-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 161 VCHFDLKPQNILIKNNT-LKLADFGFAQFLAPNDQGDSIQGSP-----LYMAPEILAGSP 214
H DL +NIL+++ +K+ADFG A+ L P D+ + P + APE L+ +
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYAPESLSDNI 190
Query: 215 YNAKADLWSLGVLVFE 230
++ ++D+WS GV+++E
Sbjct: 191 FSRQSDVWSFGVVLYE 206
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +KFL H DL +N ++
Sbjct: 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 227
Query: 176 N-TLKLADFGFAQFLAPNDQGDSIQ---GSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
T+K+ADFG A+ + + + DS+ G+ L +MA E L + K+D+WS GVL+
Sbjct: 228 KFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 286
Query: 229 FEALF-GHAPYASCN 242
+E + G PY N
Sbjct: 287 WELMTRGAPPYPDVN 301
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +KFL H DL +N ++
Sbjct: 114 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 173
Query: 176 N-TLKLADFGFAQFLAPNDQGDSIQ---GSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
T+K+ADFG A+ + + + DS+ G+ L +MA E L + K+D+WS GVL+
Sbjct: 174 KFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 232
Query: 229 FEALF-GHAPYASCN 242
+E + G PY N
Sbjct: 233 WELMTRGAPPYPDVN 247
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +KFL H DL +N ++
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 169
Query: 176 N-TLKLADFGFAQFLAPNDQGDSIQ---GSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
T+K+ADFG A+ + + + DS+ G+ L +MA E L + K+D+WS GVL+
Sbjct: 170 KFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 228
Query: 229 FEALF-GHAPYASCN 242
+E + G PY N
Sbjct: 229 WELMTRGAPPYPDVN 243
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +KFL H DL +N ++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 168
Query: 176 N-TLKLADFGFAQFLAPNDQGDSIQ---GSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
T+K+ADFG A+ + + + DS+ G+ L +MA E L + K+D+WS GVL+
Sbjct: 169 KFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 229 FEALF-GHAPYASCN 242
+E + G PY N
Sbjct: 228 WELMTRGAPPYPDVN 242
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +KFL H DL +N ++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 168
Query: 176 N-TLKLADFGFAQFLAPNDQGDSIQ---GSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
T+K+ADFG A+ + + + DS+ G+ L +MA E L + K+D+WS GVL+
Sbjct: 169 KFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 229 FEALF-GHAPYASCN 242
+E + G PY N
Sbjct: 228 WELMTRGAPPYPDVN 242
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +KFL H DL +N ++
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 166
Query: 176 N-TLKLADFGFAQFLAPNDQGDSIQ---GSPL---YMAPEILAGSPYNAKADLWSLGVLV 228
T+K+ADFG A+ + + + DS+ G+ L +MA E L + K+D+WS GVL+
Sbjct: 167 KFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 225
Query: 229 FEALF-GHAPYASCN 242
+E + G PY N
Sbjct: 226 WELMTRGAPPYPDVN 240
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 93 VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 153 KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 212
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 213 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 125 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 184
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 185 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 244
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 245 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 277
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSHE-------KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 136 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 195
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 196 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 255
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 256 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 314
Query: 281 RRISY 285
R ++
Sbjct: 315 DRPNF 319
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 124 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 302
Query: 281 RRISY 285
R ++
Sbjct: 303 DRPNF 307
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 116 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 175
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 176 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 235
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 236 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 294
Query: 281 RRISY 285
R ++
Sbjct: 295 DRPNF 299
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 116 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 175
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 176 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 235
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 236 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 268
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 230 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 288
Query: 281 RRISY 285
R ++
Sbjct: 289 DRPNF 293
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 94 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 153
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 154 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 213
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 214 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 101 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 160
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 161 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 220
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 221 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 253
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 230 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 288
Query: 281 RRISY 285
R ++
Sbjct: 289 DRPNF 293
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 98 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 157
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 158 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 217
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 218 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 94 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 153
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 154 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 213
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 214 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 93 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 153 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 212
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 213 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 151 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 211 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 94 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 153
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 154 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 213
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 214 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 97 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 156
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 157 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 216
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 217 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 249
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 151 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 211 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 98 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 157
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 158 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 217
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 218 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 93 VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 153 KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 212
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 213 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 85 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 144
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 145 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 204
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 205 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 237
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I++ G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 95 VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 154
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 155 KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 214
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 215 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 126 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 185
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 186 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 245
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 246 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 304
Query: 281 RRISY 285
R ++
Sbjct: 305 DRPNF 309
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 151 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 211 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 124 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 302
Query: 281 RRISY 285
R ++
Sbjct: 303 DRPNF 307
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 127 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 186
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 187 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 246
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 247 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 305
Query: 281 RRISY 285
R ++
Sbjct: 306 DRPNF 310
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 209
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 210 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 269
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 270 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 328
Query: 281 RRISY 285
R ++
Sbjct: 329 DRPNF 333
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 19/194 (9%)
Query: 114 YVYIILEYCDGGDLCSFIR----------------SHEKLSEFQCQQFVRQLVLALKFLR 157
Y+Y+ +EY G+L F+R + LS Q F + + +L
Sbjct: 97 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 156
Query: 158 ENNVCHFDLKPQNILIKNNTL-KLADFGFAQFLAPNDQGDSIQGSPLYMAPEILAGSPYN 216
+ H +L +NIL+ N + K+ADFG ++ + + +MA E L S Y
Sbjct: 157 QKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT 216
Query: 217 AKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLL 275
+D+WS GVL++E + G PY ++L + + P N + D + +
Sbjct: 217 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC-DDEVYDLMRQCW 275
Query: 276 QKDPMRRISYEDLF 289
++ P R S+ +
Sbjct: 276 REKPYERPSFAQIL 289
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 88 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLV 147
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 148 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 207
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 208 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 101 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 160
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 161 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 220
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S +Q + ++S PP + +++ Q P
Sbjct: 221 WSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 279
Query: 281 RRISY 285
R ++
Sbjct: 280 DRPNF 284
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I+LE GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 109 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 228
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S +Q + ++S PP + +++ Q P
Sbjct: 229 WSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 287
Query: 281 RRISY 285
R ++
Sbjct: 288 DRPNF 292
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 158
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 218
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 219 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 276
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 277 MRPSFLEIIS 286
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 90 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 149
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 150 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 209
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 210 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLLELMRMCWQYNPK 267
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 268 MRPSFLEIIS 277
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 186
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 187 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 246
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 247 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 304
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 305 MRPSFLEIIS 314
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I++E GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 124 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S + ++ S + P N P +++ Q P
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP-VYRIMTQCWQHQPE 302
Query: 281 RRISY 285
R ++
Sbjct: 303 DRPNF 307
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Query: 116 YIILEYCDGGDLCSFIRSH-------EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKP 168
+I++E GGDL SF+R L+ R + ++L EN+ H D+
Sbjct: 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168
Query: 169 QNILIK----NNTLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADL 221
+N L+ K+ DFG A+ + +G +M PE + +K D
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 228
Query: 222 WSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPM 280
WS GVL++E G+ PY S +Q + ++S PP + +++ Q P
Sbjct: 229 WSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 287
Query: 281 RRISY 285
R ++
Sbjct: 288 DRPNF 292
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 42/197 (21%)
Query: 141 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQ 199
Q F+ ++L L L E V H DL P NIL+ NN + + DF A+ +
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV 194
Query: 200 GSPLYMAPE-ILAGSPYNAKADLWSLGVLVFE-----ALF-GHAPYASCN---------- 242
Y APE ++ + D+WS G ++ E ALF G Y N
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 243 -------------------LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
LS + A+A ++ T P +L D ++++L+ +P RRI
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL-----DLIAKMLEFNPQRRI 309
Query: 284 SYEDLFSHPYPDLIHAP 300
S E HPY + + P
Sbjct: 310 STEQALRHPYFESLFDP 326
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 42/197 (21%)
Query: 141 QCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPNDQGDSIQ 199
Q F+ ++L L L E V H DL P NIL+ NN + + DF A+ +
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV 194
Query: 200 GSPLYMAPE-ILAGSPYNAKADLWSLGVLVFE-----ALF-GHAPYASCN---------- 242
Y APE ++ + D+WS G ++ E ALF G Y N
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 243 -------------------LSQLRAQALSSAPITIPPNSLSPDCMDFLSRLLQKDPMRRI 283
LS + A+A ++ T P +L D ++++L+ +P RRI
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL-----DLIAKMLEFNPQRRI 309
Query: 284 SYEDLFSHPYPDLIHAP 300
S E HPY + + P
Sbjct: 310 STEQALRHPYFESLFDP 326
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 157
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 217
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 218 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 275
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 276 MRPSFLEIIS 285
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 151
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 152 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 211
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 212 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 269
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 270 MRPSFLEIIS 279
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 93 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 152
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 153 KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 212
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 213 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 98 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 157
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 158 KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 217
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 218 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 158
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 218
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 219 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 276
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 277 MRPSFLEIIS 286
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
V +I + G L ++R H + + + Q+ + +L + + H DL +N+L+
Sbjct: 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 150
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K +K+ DFG A+ L ++ +G + +MA E + Y ++D+WS GV V+
Sbjct: 151 KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 210
Query: 230 EAL-FGHAPYASCNLSQL-----RAQALSSAPI 256
E + FG PY S++ + + L PI
Sbjct: 211 ELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 96 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 155
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 156 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 215
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 216 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 273
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 274 MRPSFLEIIS 283
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 157
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 217
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 218 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 275
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 276 MRPSFLEIIS 285
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 30/153 (19%)
Query: 115 VYIILEYCDGGDLCSFIRSHEK-----------------------LSEFQCQQFVRQLVL 151
V +I EYC GDL +F+R + L F Q+
Sbjct: 110 VLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQ 169
Query: 152 ALKFLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPNDQGDSIQGS---PL-YMA 206
+ FL N H D+ +N+L+ N + K+ DFG A+ + ND ++G+ P+ +MA
Sbjct: 170 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVKWMA 228
Query: 207 PEILAGSPYNAKADLWSLGVLVFEAL-FGHAPY 238
PE + Y ++D+WS G+L++E G PY
Sbjct: 229 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
+++EY G L F++ H +L + + Q+ +++L H DL +NIL+++
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 149
Query: 176 NT-LKLADFGFAQFLAPNDQGDSIQGSP-----LYMAPEILAGSPYNAKADLWSLGVLVF 229
+K+ADFG A+ L P D+ + P + APE L+ + ++ ++D+WS GV+++
Sbjct: 150 EAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 208
Query: 230 E 230
E
Sbjct: 209 E 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 105 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 164
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 224
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 225 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 282
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 283 MRPSFLEIIS 292
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
+++EY G L F++ H +L + + Q+ +++L H DL +NIL+++
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 162
Query: 176 NT-LKLADFGFAQFLAPNDQGDSIQGSP-----LYMAPEILAGSPYNAKADLWSLGVLVF 229
+K+ADFG A+ L P D+ + P + APE L+ + ++ ++D+WS GV+++
Sbjct: 163 EAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 221
Query: 230 E 230
E
Sbjct: 222 E 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKL----------SEFQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS S + Q ++ + +L N H DL
Sbjct: 95 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 154
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 155 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 214
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 215 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 272
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 273 MRPSFLEIIS 282
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 117 IILEYCDGGDLCSFIRSHE-KLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
+++EY G L F++ H +L + + Q+ +++L H DL +NIL+++
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 150
Query: 176 NT-LKLADFGFAQFLAPNDQGDSIQGSP-----LYMAPEILAGSPYNAKADLWSLGVLVF 229
+K+ADFG A+ L P D+ + P + APE L+ + ++ ++D+WS GV+++
Sbjct: 151 EAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 209
Query: 230 E 230
E
Sbjct: 210 E 210
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLADFGFAQFLAPNDQGDSIQ 199
++F ++ L L +N + H DLKP+NIL+K + +K+ DFG + + + + +
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTXI 260
Query: 200 GSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGH 235
S Y APE++ G+ Y D+WSLG ++ E L G+
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 115 VYIILEYCDGGDLCSFIRSHEKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+Y+ +G DL + +R L+ + VRQ+ AL H D+KP+NIL+
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS 168
Query: 175 NNTLK-LADFGFAQFLAPNDQ-----GDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLV 228
+ L DFG A A D+ G+++ G+ Y APE + S +AD+++L ++
Sbjct: 169 ADDFAYLVDFGIAS--ATTDEKLTQLGNTV-GTLYYXAPERFSESHATYRADIYALTCVL 225
Query: 229 FEALFGHAPYASCNLSQLRAQALSSAP 255
+E L G PY LS A + P
Sbjct: 226 YECLTGSPPYQGDQLSVXGAHINQAIP 252
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 144 QFVRQLVLALKFLRENNVCHFDLKPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQ 199
+F+ + L +++L N H DL +N +++++ T+ +ADFG ++ + D QG +
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 200 GSPLYMAPEILAGSPYNAKADLWSLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITI 258
++A E LA Y +K+D+W+ GV ++E A G PY ++ L +
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ 270
Query: 259 PPNSLSPDCMDFLSRLL----QKDPMRRISY 285
P DC+D L ++ + DP+ R ++
Sbjct: 271 P-----EDCLDELYEIMYSCWRTDPLDRPTF 296
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLADFGFAQFLAPNDQGDSIQ 199
++F ++ L L +N + H DLKP+NIL+K + +K+ DFG + + + + +
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTXI 260
Query: 200 GSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGH 235
S Y APE++ G+ Y D+WSLG ++ E L G+
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKL----------SEFQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS S + Q ++ + +L N H DL
Sbjct: 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 164
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N ++ + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 224
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 225 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCWQYNPK 282
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 283 MRPSFLEIIS 292
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSE----------FQCQQFVRQLVLALKFLRENNVCHFDL 166
+I+E GDL S++RS E + Q ++ + +L N H DL
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 151
Query: 167 KPQNILIKNN-TLKLADFGFAQFLAPND---QGDSIQGSPLYMAPEILAGSPYNAKADLW 222
+N + + T+K+ DFG + + D +G +M+PE L + +D+W
Sbjct: 152 AARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 211
Query: 223 SLGVLVFE-ALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSRL-LQKDPM 280
S GV+++E A PY + Q+ + + P N PD + L R+ Q +P
Sbjct: 212 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN--CPDMLLELMRMCWQYNPK 269
Query: 281 RRISYEDLFS 290
R S+ ++ S
Sbjct: 270 MRPSFLEIIS 279
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQCQQFVR---QLVLALKFLRENN--VCHFDLKPQNI 171
++ E C G L F++ E C ++ Q A++ + + H DLK +N+
Sbjct: 111 LLTELCKG-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENL 169
Query: 172 LIKN-NTLKLADFGFA-------------QFLAPNDQGDSIQGSPLYMAPEIL---AGSP 214
L+ N T+KL DFG A Q A ++ + +P+Y PEI+ + P
Sbjct: 170 LLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFP 229
Query: 215 YNAKADLWSLGVLVFEALFGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDFLSR- 273
K D+W+LG +++ F P+ + ++LR + + +IPP+ L R
Sbjct: 230 IGEKQDIWALGCILYLLCFRQHPFE--DGAKLR---IVNGKYSIPPHDTQYTVFHSLIRA 284
Query: 274 LLQKDPMRRISYEDL 288
+LQ +P R+S ++
Sbjct: 285 MLQVNPEERLSIAEV 299
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ ++ + G L ++ H + + + Q+ + +L E + H DL +N+L+
Sbjct: 114 IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV 173
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K+ N +K+ DFG A+ L +++ + G + +MA E + + ++D+WS GV ++
Sbjct: 174 KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIW 233
Query: 230 EAL-FGHAPY 238
E + FG PY
Sbjct: 234 ELMTFGGKPY 243
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 143 QQFVRQLVLALKFLRENNVCHFDLKPQNILIKN---NTLKLADFGFAQFLAPNDQGDSIQ 199
++F ++ L L +N + H DLKP+NIL+K + +K+ DFG + + IQ
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY-EHQRVYXXIQ 261
Query: 200 GSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGH 235
S Y APE++ G+ Y D+WSLG ++ E L G+
Sbjct: 262 -SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 137 LSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQ-FLAPNDQ 194
L+ + ++ + L++L ++ + H DLKP N+L+ +N LKLADFG A+ F +PN
Sbjct: 109 LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168
Query: 195 GDSIQGSPLYMAPEILAGS-PYNAKADLWSLGVLVFEALF 233
+ Y APE+L G+ Y D+W++G ++ E L
Sbjct: 169 YXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL 208
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 167
Query: 176 N-TLKLADFGFAQFLAPNDQGD--SIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
T+K+ADFG A+ + + + G+ L +MA E L + K+D+WS GVL++
Sbjct: 168 KFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 227
Query: 230 EALF-GHAPYASCN 242
E + G PY N
Sbjct: 228 ELMTRGAPPYPDVN 241
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 115 VYIILEYCDGGDLCSFIRSH-EKLSEFQCQQFVRQLVLALKFLRENNVCHFDLKPQNILI 173
+ ++ + G L ++ H + + + Q+ + +L E + H DL +N+L+
Sbjct: 91 IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV 150
Query: 174 KN-NTLKLADFGFAQFLAPNDQGDSIQGSPL---YMAPEILAGSPYNAKADLWSLGVLVF 229
K+ N +K+ DFG A+ L +++ + G + +MA E + + ++D+WS GV ++
Sbjct: 151 KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIW 210
Query: 230 EAL-FGHAPY 238
E + FG PY
Sbjct: 211 ELMTFGGKPY 220
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 168
Query: 176 N-TLKLADFGFAQ-------FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
T+K+ADFG A+ + N G + +MA E L + K+D+WS GVL
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--WMALESLQTQKFTTKSDVWSFGVL 226
Query: 228 VFEALF-GHAPYASCN 242
++E + G PY N
Sbjct: 227 LWELMTRGAPPYPDVN 242
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 167
Query: 176 N-TLKLADFGFAQ-------FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
T+K+ADFG A+ + N G + +MA E L + K+D+WS GVL
Sbjct: 168 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--WMALESLQTQKFTTKSDVWSFGVL 225
Query: 228 VFEALF-GHAPYASCN 242
++E + G PY N
Sbjct: 226 LWELMTRGAPPYPDVN 241
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 127 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 186
Query: 176 N-TLKLADFGFAQ-------FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
T+K+ADFG A+ + N G + +MA E L + K+D+WS GVL
Sbjct: 187 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--WMALESLQTQKFTTKSDVWSFGVL 244
Query: 228 VFEALF-GHAPYASCN 242
++E + G PY N
Sbjct: 245 LWELMTRGAPPYPDVN 260
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 163
Query: 176 N-TLKLADFGFAQ-------FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
T+K+ADFG A+ + N G + +MA E L + K+D+WS GVL
Sbjct: 164 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--WMALESLQTQKFTTKSDVWSFGVL 221
Query: 228 VFEALF-GHAPYASCN 242
++E + G PY N
Sbjct: 222 LWELMTRGAPPYPDVN 237
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 165
Query: 176 N-TLKLADFGFAQ-------FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
T+K+ADFG A+ + N G + +MA E L + K+D+WS GVL
Sbjct: 166 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--WMALESLQTQKFTTKSDVWSFGVL 223
Query: 228 VFEALF-GHAPYASCN 242
++E + G PY N
Sbjct: 224 LWELMTRGAPPYPDVN 239
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 128 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 187
Query: 176 N-TLKLADFGFAQ-------FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
T+K+ADFG A+ + N G + +MA E L + K+D+WS GVL
Sbjct: 188 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--WMALESLQTQKFTTKSDVWSFGVL 245
Query: 228 VFEALF-GHAPYASCN 242
++E + G PY N
Sbjct: 246 LWELMTRGAPPYPDVN 261
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 168
Query: 176 N-TLKLADFGFAQ-------FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
T+K+ADFG A+ + N G + +MA E L + K+D+WS GVL
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--WMALESLQTQKFTTKSDVWSFGVL 226
Query: 228 VFEALF-GHAPYASCN 242
++E + G PY N
Sbjct: 227 LWELMTRGAPPYPDVN 242
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 101 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 160
Query: 176 N-TLKLADFGFAQ-------FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
T+K+ADFG A+ + N G + +MA E L + K+D+WS GVL
Sbjct: 161 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--WMALESLQTQKFTTKSDVWSFGVL 218
Query: 228 VFEALF-GHAPYASCN 242
++E + G PY N
Sbjct: 219 LWELMTRGAPPYPDVN 234
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 117 IILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIKN 175
++L Y GDL +FIR+ + F Q+ +K+L H DL +N ++
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 166
Query: 176 N-TLKLADFGFAQ-------FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVL 227
T+K+ADFG A+ + N G + +MA E L + K+D+WS GVL
Sbjct: 167 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--WMALESLQTQKFTTKSDVWSFGVL 224
Query: 228 VFEALF-GHAPYASCN 242
++E + G PY N
Sbjct: 225 LWELMTRGAPPYPDVN 240
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 117 IILEYCDGGDLCSFIRS----------HEKLSE-----------FQCQQ---FVRQLVLA 152
++ EY GDL F+RS H LS C + RQ+
Sbjct: 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG 186
Query: 153 LKFLRENNVCHFDLKPQNILI-KNNTLKLADFGFAQFLAPND--QGDSIQGSPL-YMAPE 208
+ +L E H DL +N L+ +N +K+ADFG ++ + D + D P+ +M PE
Sbjct: 187 MAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE 246
Query: 209 ILAGSPYNAKADLWSLGVLVFEAL-FGHAPY 238
+ + Y ++D+W+ GV+++E +G PY
Sbjct: 247 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 116 YIILEYCDGGDLCSFIRSHEKLSEFQ-CQQFVRQLVLALKFLRENNVCHFDLKPQNILIK 174
+++L Y GDL FIRS ++ + F Q+ +++L E H DL +N ++
Sbjct: 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD 158
Query: 175 NN-TLKLADFGFAQFLAPND-----QGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLV 228
+ T+K+ADFG A+ + + Q + + A E L + K+D+WS GVL+
Sbjct: 159 ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL 218
Query: 229 FEALF-GHAPYASC---NLSQLRAQALSSAPITIPPNSLSPDCM-DFLSRLLQKDPMRRI 283
+E L G PY +L+ AQ +P PD + + + + DP R
Sbjct: 219 WELLTRGAPPYRHIDPFDLTHFLAQGRR-----LPQPEYCPDSLYQVMQQCWEADPAVRP 273
Query: 284 SYEDL 288
++ L
Sbjct: 274 TFRVL 278
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 105/258 (40%), Gaps = 15/258 (5%)
Query: 45 GTVRYDIVGSSTIR---YGELQYDTVQNSQIRLGTVKYSQVRYD-TITSHSEFERPRAGL 100
G R D+V + + +GE+ N + V + D T+ + +F +
Sbjct: 20 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 101 SNLRAPE-----GRKRPRYVYIILEYCDGGDLCSFI-RSHEKLSEFQCQQFVRQLVLALK 154
NL P G +II+E G+L ++ R+ L + Q+ A+
Sbjct: 80 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 139
Query: 155 FLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPND-QGDSIQGSPL-YMAPEILA 211
+L N H D+ +NIL+ + +KL DFG ++++ D S+ P+ +M+PE +
Sbjct: 140 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 199
Query: 212 GSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDF 270
+ +D+W V ++E L FG P+ + L P+ P
Sbjct: 200 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-VLEKGDRLPKPDLCPPVLYTL 258
Query: 271 LSRLLQKDPMRRISYEDL 288
++R DP R + +L
Sbjct: 259 MTRCWDYDPSDRPRFTEL 276
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 105/258 (40%), Gaps = 15/258 (5%)
Query: 45 GTVRYDIVGSSTIR---YGELQYDTVQNSQIRLGTVKYSQVRYD-TITSHSEFERPRAGL 100
G R D+V + + +GE+ N + V + D T+ + +F +
Sbjct: 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 101 SNLRAPE-----GRKRPRYVYIILEYCDGGDLCSFI-RSHEKLSEFQCQQFVRQLVLALK 154
NL P G +II+E G+L ++ R+ L + Q+ A+
Sbjct: 68 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 127
Query: 155 FLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPND-QGDSIQGSPL-YMAPEILA 211
+L N H D+ +NIL+ + +KL DFG ++++ D S+ P+ +M+PE +
Sbjct: 128 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 187
Query: 212 GSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDF 270
+ +D+W V ++E L FG P+ + L P+ P
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-VLEKGDRLPKPDLCPPVLYTL 246
Query: 271 LSRLLQKDPMRRISYEDL 288
++R DP R + +L
Sbjct: 247 MTRCWDYDPSDRPRFTEL 264
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 105/258 (40%), Gaps = 15/258 (5%)
Query: 45 GTVRYDIVGSSTIR---YGELQYDTVQNSQIRLGTVKYSQVRYD-TITSHSEFERPRAGL 100
G R D+V + + +GE+ N + V + D T+ + +F +
Sbjct: 4 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 63
Query: 101 SNLRAPE-----GRKRPRYVYIILEYCDGGDLCSFI-RSHEKLSEFQCQQFVRQLVLALK 154
NL P G +II+E G+L ++ R+ L + Q+ A+
Sbjct: 64 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 123
Query: 155 FLRENNVCHFDLKPQNILIKN-NTLKLADFGFAQFLAPND-QGDSIQGSPL-YMAPEILA 211
+L N H D+ +NIL+ + +KL DFG ++++ D S+ P+ +M+PE +
Sbjct: 124 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 183
Query: 212 GSPYNAKADLWSLGVLVFEAL-FGHAPYASCNLSQLRAQALSSAPITIPPNSLSPDCMDF 270
+ +D+W V ++E L FG P+ + L P+ P
Sbjct: 184 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-VLEKGDRLPKPDLCPPVLYTL 242
Query: 271 LSRLLQKDPMRRISYEDL 288
++R DP R + +L
Sbjct: 243 MTRCWDYDPSDRPRFTEL 260
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 81/212 (38%), Gaps = 64/212 (30%)
Query: 148 QLVLALKFLRENNVCHFDLKPQNIL--------------------IKNNTLKLADFGFAQ 187
Q+ ++ FL N + H DLKP+NIL + N +K+ DFG A
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 188 FLAPNDQGDSIQGSPLYMAPEILAGSPYNAKADLWSLGVLVFEALFGHAPYASCNLSQLR 247
+ ++ ++ + Y APE++ ++ D+WS+G ++ E G + + + +
Sbjct: 186 Y--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 248 AQA-------------------------------------LSSAPITIPPNSLSPDC--- 267
A +S A + LS D
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 268 --MDFLSRLLQKDPMRRISYEDLFSHPYPDLI 297
D + ++L+ DP +RI+ + HP+ DL+
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFFDLL 335
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,409,996
Number of Sequences: 62578
Number of extensions: 455450
Number of successful extensions: 3820
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 1024
Number of HSP's gapped (non-prelim): 1317
length of query: 406
length of database: 14,973,337
effective HSP length: 101
effective length of query: 305
effective length of database: 8,652,959
effective search space: 2639152495
effective search space used: 2639152495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)