RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5372
(586 letters)
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT
like protease, serine protease; HET: NDG; 1.90A
{Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB:
1r64_A* 1ot5_A*
Length = 503
Score = 440 bits (1132), Expect = e-150
Identities = 182/453 (40%), Positives = 264/453 (58%), Gaps = 11/453 (2%)
Query: 120 FTDEWWPMQWYEQDYRLSNSSK-KLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIK 178
D + QW+ L N S D+N++ ++ NI GAGV I+DDG++Y +ED+K
Sbjct: 20 INDPLFERQWH-----LVNPSFPGSDINVLDLW-YNNITGAGVVAAIVDDGLDYENEDLK 73
Query: 179 DSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVK 238
D+F E S++FN PR D + HGTRCAGE+ K N+ CGVGV Y A++ G++
Sbjct: 74 DNFCAEGSWDFNDNTNLPKPRLSD--DYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIR 131
Query: 239 LLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGK 298
+L G+ T E+ +L +GLD DIYS SWGP DDG+ + GP L K A+ +G+ EGR K
Sbjct: 132 ILSGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSK 191
Query: 299 GVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGI 358
G ++VFA+GNG GDNC DGY NSIY+I I + P YSE C+ ++A YS G
Sbjct: 192 GAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYSSGS 251
Query: 359 SDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREP 418
+ I ++D++ C+ H GTSAAAP+AAGV L LEANPN+TWRD Q++ ++
Sbjct: 252 GE--YIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLE 309
Query: 419 LSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSY 478
+ W +A + YGFG I+ KL+ ++K W NV AQ + S + S
Sbjct: 310 KNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTWENVNAQTWFYLPTLYVSQSTNST 369
Query: 479 ASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQ 538
+ + I+ S K +EHV T++I+ RG ++L +P+G+ S L RP+
Sbjct: 370 EETLESVITISEKSLQDANFKRIEHVTVTVDIDTEIRGTTTVDLISPAGIISNLGVVRPR 429
Query: 539 DDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDT 571
D GF DW+ +++ HWGE+ VG+WK ++ T
Sbjct: 430 DVSSEGFKDWTFMSVAHWGENGVGDWKIKVKTT 462
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET:
DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus}
SCOP: b.18.1.20 c.41.1.1
Length = 471
Score = 436 bits (1121), Expect = e-148
Identities = 193/458 (42%), Positives = 273/458 (59%), Gaps = 12/458 (2%)
Query: 119 MFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIK 178
TD +P QWY LS ++ DLN+ + + G G+ + I+DDG+E H D+
Sbjct: 5 EPTDPKFPQQWY-----LSGVTQ-RDLNVKEAWAQ-GFTGHGIVVSILDDGIEKNHPDLA 57
Query: 179 DSFAPELSYNFNAEKWDITPRYEDP-RNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGV 237
++ P S++ N + D PRY N+HGTRCAGE+ NN CGVGV Y AR+GGV
Sbjct: 58 GNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGV 117
Query: 238 KLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQG 297
++LDGE TD +E+++L + + IYS SWGP DDGK++DGP +L++ A RG+ +GR G
Sbjct: 118 RMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGG 177
Query: 298 KGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGG 357
G +FV+A+GNG D+C DGY NSIYT++I+SA + G P+YSE C+ +AT YS G
Sbjct: 178 LGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSG 237
Query: 358 ISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSERE 417
+ +I+TTD+ CT H+GTSA+AP+AAG++AL LEAN N+TWRD QH++ TS+
Sbjct: 238 NQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPA 297
Query: 418 PLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFS 477
L+ W N +YG+GL++ +V+LA+NW V Q KC + + V
Sbjct: 298 HLNA-DDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIGK 356
Query: 478 YASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRP 537
+T C + + LEHV A L + + RRGD+ I L +P G +S L+ RP
Sbjct: 357 RLEV---RKAVTACLGEPNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARP 413
Query: 538 QDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDTKYDG 575
D GF DW+ +T W EDP GEW EI +T
Sbjct: 414 HDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEAN 451
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas
sobria} PDB: 3hjr_A
Length = 600
Score = 348 bits (893), Expect = e-113
Identities = 116/538 (21%), Positives = 202/538 (37%), Gaps = 96/538 (17%)
Query: 120 FTDEWWPMQWY-----EQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTH 174
+ QWY + + DLN+ ++ + G GVN+ ++DDG+ H
Sbjct: 27 GANPLQDQQWYLLNSGQDGFSARGGIAGNDLNLWWAHRT-GVLGHGVNVAVVDDGLAIAH 85
Query: 175 EDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARV 234
D+ D+ P S N D TP D HGT +G + +N+ G+ A++
Sbjct: 86 PDLADNVRPG-SKNVVTGSDDPTPTDPD--TGHGTSVSGIIAAV-DNAIGTKGIAPRAQL 141
Query: 235 GGVKLLDGE----TTDLIESKALQFGLDKVDIYSGSWGPPD------------------D 272
G LLD D + + +++ S+ +
Sbjct: 142 QGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFE 201
Query: 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNG-KYNGDNCAADGYINSIYTIAIA 331
+++ G A G + G + GNG K +N D ++ + + ++
Sbjct: 202 QQTLKAQGAAYIKAAGNGFNKI--AAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVS 259
Query: 332 SAREDGQSPFYSEECTGLIATAYSGGISDPVKIITT------------------------ 367
+ DG YS + + +A G + T
Sbjct: 260 ALNADGVRSSYSSVGSNIFLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGN 319
Query: 368 ---DVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLS---- 420
D +GTS+A P +G +AL + A P+++ RD + +LA ++ R
Sbjct: 320 SQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPV 379
Query: 421 ---------------HVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKCE 465
+ GWERNA +WF YGFGLI+ K + LA N +P +
Sbjct: 380 MVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANHQPLPPLVQLP 439
Query: 466 IALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAP 525
+ + + A + T + + +E V ++++H R D+ IEL +P
Sbjct: 440 WQKINVTGSAAAIADV---GNSPTSSTTRIATPLTVEAVQVMVSLDHQRLPDLLIELVSP 496
Query: 526 SGVKSVLMEP------RPQDDCKTGFV------DWSILTLKHWGEDPVGEWKFEIFDT 571
+G +S+L+ P + D + GFV D +L+ K +GE G W+ E+ D
Sbjct: 497 AGTRSILLSPFNSLVGQSLDQQQLGFVRTKGLRDMRMLSNKFYGESAQGTWRLEVTDV 554
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A
{Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E*
1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E*
1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E*
1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Length = 281
Score = 114 bits (287), Expect = 2e-28
Identities = 76/308 (24%), Positives = 119/308 (38%), Gaps = 72/308 (23%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
G+ V + +ID G++ +H D+K + + + T ++D N HGT A
Sbjct: 18 SQGYTGSNVKVAVIDSGIDSSHPDLKVA----GGASMVPSE---TNPFQD-NNSHGTHVA 69
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-KVDIYSGSW 267
G V NNS +GV A + VK+L G+ + +I +++ + +D+ + S
Sbjct: 70 G-TVAALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIIN--GIEWAIANNMDVINMSL 126
Query: 268 GPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC------AADGY 321
G P ++ AA+D+ + GV+ V AAGN +G +
Sbjct: 127 GGPSGSAALK-------AAVDKAVA-----SGVVVVAAAGNEGTSGSSSTVGYPGKYPS- 173
Query: 322 INSIYTIAIASAREDGQSPFYSEECTGLIATAYSGG----ISDP-VKIITTDVHNTCTCE 376
IA+ + Q +S S G + P V I +T N
Sbjct: 174 -----VIAVGAVDSSNQRASFS-----------SVGPELDVMAPGVSIQSTLPGNK-YGA 216
Query: 377 HSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHS 436
++GTS A+P AG AL L +PN T + L E L
Sbjct: 217 YNGTSMASPHVAGAAALILSKHPNWTNTQVRSSL---------------ENTTTKLGDSF 261
Query: 437 AYGFGLIN 444
YG GLIN
Sbjct: 262 YYGKGLIN 269
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like
protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP:
c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Length = 310
Score = 113 bits (286), Expect = 3e-28
Identities = 71/310 (22%), Positives = 115/310 (37%), Gaps = 49/310 (15%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G+G+NI ++D G+ +H D+ ++ +F I D RN HGT AG +
Sbjct: 25 GSGINIAVLDTGVNTSHPDLVNNVEQ--CKDFTGATTPINNSCTD-RNGHGTHVAGTALA 81
Query: 218 KPNNSKCGV-GVCYGARVGGVKLLD----GETTDLIESKALQF------GLDKVDIYSGS 266
+ + G+ GV A + K+L G + D+ A++ I S S
Sbjct: 82 DGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAA--AIRHAADQATATGTKTIISMS 139
Query: 267 WGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIY 326
G + + +A++ KGVL V AAGN Y+ G + +
Sbjct: 140 LGSSANNSLIS-------SAVNYAYS-----KGVLIVAAAGNSGYSQGTIGYPGALPNAI 187
Query: 327 TIAIASAREDGQSPF----YSEECTGLIATAYSGGISDP--------VKIITTDVHNTCT 374
+A A + YS G I+TA I + + +T +N
Sbjct: 188 AVA-ALENVQQNGTYRVADYS--SRGYISTAGDYVIQEGDIEISAPGSSVYST-WYNGGY 243
Query: 375 CEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWF 434
SGTS A P +G+ A NP+++ + L ++ + G D
Sbjct: 244 NTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAAIG-DD--- 299
Query: 435 HSAYGFGLIN 444
A GFG
Sbjct: 300 -YASGFGFAR 308
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel,
hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1
PDB: 1wme_A 1wmf_A
Length = 434
Score = 113 bits (284), Expect = 3e-27
Identities = 71/409 (17%), Positives = 119/409 (29%), Gaps = 73/409 (17%)
Query: 150 VYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGT 209
+ G G + + D G++ D A + N HGT
Sbjct: 13 AQSSYGLYGQGQIVAVADTGLDTGRNDSSM--HEAFRGKITALYALGRTNNANDTNGHGT 70
Query: 210 RCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLD-----KVDIYS 264
AG ++ + +K G+ A + ++D LQ I++
Sbjct: 71 HVAGSVLGNGSTNK---GMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHT 127
Query: 265 GSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINS 324
SWG +G S+ D +R+ + +FAAGN NG +A G +
Sbjct: 128 NSWGAAVNG----AYTTDSRNV-DDYVRK----NDMTILFAAGNEGPNGGTISAPG--TA 176
Query: 325 IYTIAIASAREDGQSPFYSEECTGLIATAYSGG-----ISDP------VKIITTDVHNTC 373
I + + S + +A S G P I++
Sbjct: 177 KNAITVGATENLRPSFGSYADNINHVAQFSSRGPTKDGRIKPDVMAPGTFILSARSSLAP 236
Query: 374 TCEH-----------SGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHV 422
GTS A PI AG +A E + L +
Sbjct: 237 DSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALI------ 290
Query: 423 SGWERNARDLW---FHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYA 479
A D+ + G+G + K +++A V S+ S +
Sbjct: 291 ----AGAADIGLGYPNGNQGWGRVTLDKSLNVAY----------------VNESSSLSTS 330
Query: 480 SSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGV 528
SF T + A+ D+ + +TAP+G
Sbjct: 331 QKATYSFTATA-GKPLKISLVWSDAPASTTASVTLVNDLDLVITAPNGT 378
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Length = 280
Score = 110 bits (277), Expect = 4e-27
Identities = 64/305 (20%), Positives = 114/305 (37%), Gaps = 67/305 (21%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
+G I +ID G++YTH D+ Y+F +D N HGT AG
Sbjct: 30 SSGQEIAVIDTGVDYTHPDLDGKVIK--GYDFVDNDYDPMDL-----NNHGTHVAGIAAA 82
Query: 218 KPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDK-VDIYSGSWGPPDD 272
+ NN+ G+ R+ V+ LD G +D+ + A+ + D ++ + S G
Sbjct: 83 ETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIAD--AIIYAADSGAEVINLSLGCDCH 140
Query: 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY-INSIYTIAIA 331
+++ A++ KG + V AAGN + + + IA+
Sbjct: 141 TTTLE-------NAVNYAWN-----KGSVVVAAAGN-----NGSSTTFEPASYENVIAVG 183
Query: 332 SAREDGQSPFYSEECTGLIATAYSGG----ISDP-VKIITTDVHNTCTCEHSGTSAAAPI 386
+ + + +S + G + P V I++T N SGTS A+P
Sbjct: 184 AVDQYDRLASFS-----------NYGTWVDVVAPGVDIVSTITGNR-YAYMSGTSMASPH 231
Query: 387 AAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHS-AYGFGLINT 445
AG+ AL + + + E+ A + + +G IN+
Sbjct: 232 VAGLAALLASQGR--NNIEIRQAI---------------EQTADKISGTGTYFKYGRINS 274
Query: 446 FKLVS 450
+ V+
Sbjct: 275 YNAVT 279
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein
inhibitor, hydrolase; 1.10A {Bacillus licheniformis}
SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A
1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A
2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Length = 274
Score = 109 bits (274), Expect = 8e-27
Identities = 70/309 (22%), Positives = 113/309 (36%), Gaps = 75/309 (24%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
GA V + ++D G++ +H D+ +F A + D N HGT A
Sbjct: 18 AQGFKGANVKVAVLDTGIQASHPDLNVV----GGASFVAGEAY----NTD-GNGHGTHVA 68
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-KVDIYSGSW 267
G V +N+ +GV + VK+L+ G + ++ +++ +D+ + S
Sbjct: 69 G-TVAALDNTTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVS--GIEWATTNGMDVINMSL 125
Query: 268 GPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIY- 326
G +M A+D +GV+ V AAGN G N+I
Sbjct: 126 GGASGSTAMK-------QAVDNAYA-----RGVVVVAAAGNS-------GNSGSTNTIGY 166
Query: 327 ------TIAIASAREDGQSPFYSEECTGLIATAYSGG----ISDP-VKIITTDVHNTCTC 375
IA+ + + +S S G + P + +T NT
Sbjct: 167 PAKYDSVIAVGAVDSNSNRASFS-----------SVGAELEVMAPGAGVYSTYPTNT-YA 214
Query: 376 EHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFH 435
+GTS A+P AG AL L +PN++ ++ L A L
Sbjct: 215 TLNGTSMASPHVAGAAALILSKHPNLSASQVRNRL---------------SSTATYLGSS 259
Query: 436 SAYGFGLIN 444
YG GLIN
Sbjct: 260 FYYGKGLIN 268
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces
vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Length = 279
Score = 108 bits (272), Expect = 2e-26
Identities = 66/307 (21%), Positives = 104/307 (33%), Gaps = 71/307 (23%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELV 216
G+G I I+D G++ H D+ ++F D ++ N HGT CAG
Sbjct: 28 EGSGAKIAIVDTGVQSNHPDLAGKVVG--GWDF----VDNDSTPQN-GNGHGTHCAGIAA 80
Query: 217 MKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDK-VDIYSGSWGPPD 271
NNS G A + V++LD G T + + + D+ + S S G
Sbjct: 81 AVTNNSTGIAGTAPKASILAVRVLDNSGSGTWTAVAN--GITYAADQGAKVISLSLGGTV 138
Query: 272 DGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDN-----CAADGYINSIY 326
+ A++ KG + V AAGN G+
Sbjct: 139 GNSGLQ-------QAVNYAWN-----KGSVVVAAAGN---AGNTAPNYPAYYSN------ 177
Query: 327 TIAIASAREDGQSPFYSE--ECTGLIATAYSGGISDP-VKIITTDVHNTCTCEHSGTSAA 383
IA+AS ++ +S + A P I +T +T SGTS A
Sbjct: 178 AIAVASTDQNDNKSSFSTYGSWVDVAA---------PGSSIYSTYPTST-YASLSGTSMA 227
Query: 384 APIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFH-SAYGFGL 442
P AGV L + + + + E A + + + G
Sbjct: 228 TPHVAGVAGLLASQGR--SASNIRAAI---------------ENTADKISGTGTYWAKGR 270
Query: 443 INTFKLV 449
+N +K V
Sbjct: 271 VNAYKAV 277
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus
kodakaraensis, hydrolas protease; 2.00A {Thermococcus
kodakarensis}
Length = 539
Score = 111 bits (280), Expect = 3e-26
Identities = 75/423 (17%), Positives = 139/423 (32%), Gaps = 83/423 (19%)
Query: 131 EQDYRLSNSSKKLDLN------IVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPE 184
++DY + + + L+ + L +G+G+ I IID G++ +H D++
Sbjct: 105 QEDYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQGKVIG- 163
Query: 185 LSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGV-GVCYGARVGGVKLLD-- 241
+F K D N HGT A S G+ GA++ G+K+L+
Sbjct: 164 -WVDFVNGKTT----PYD-DNGHGTHVASIAAGTGAASNGKYKGMAPGAKLVGIKVLNGQ 217
Query: 242 --GETTDLIESKALQFGLDK-----VDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREG 294
G +D+I + + + + + + S G D ++ + +
Sbjct: 218 GSGSISDIIN--GVDWAVQNKDKYGIKVINLSLGSSQSSDGTD--------SLSQAVNNA 267
Query: 295 RQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTG-LIATA 353
G++ V AAGN + + I + + + +S G
Sbjct: 268 WD-AGLVVVVAAGN--SGPNKYTVGSPAAASKVITVGAVDKYDVITDFS--SRGPTADNR 322
Query: 354 YSGGISDP-VKIITTDVHNTCTCEH--------SGTSAAAPIAAGVLALALEANPNMTWR 404
+ P II T + GT+ A P AG+ AL L+A+P+ T
Sbjct: 323 LKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPD 382
Query: 405 DCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVPAQAKC 464
+ L T+ + + + AYG G +N +K
Sbjct: 383 KVKTALIETA--DIVKPDEIAD---------IAYGAGRVNAYKAAYYD------------ 419
Query: 465 EIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTA 524
+ + S S F I+ + + D+ + L
Sbjct: 420 -NYAKLTFTGYVSNKGSQSHQFTISGAGFVTATLYW-----------DNSGSDLDLYLYD 467
Query: 525 PSG 527
P+G
Sbjct: 468 PNG 470
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease,
intracellular proteinase regulat; HET: CSX 1PE; 1.56A
{Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Length = 327
Score = 107 bits (269), Expect = 9e-26
Identities = 67/317 (21%), Positives = 108/317 (34%), Gaps = 58/317 (18%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
+ GAG I +ID G + H D+ + N + + D N HGT A
Sbjct: 35 RASAKGAGQIIGVIDTGCQVDHPDLAERIIG--GVNLTTDYGGDETNFSD-NNGHGTHVA 91
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIES-----KALQFGLDKVDIY 263
G V VGV A + +K L GE + ++ +++ I
Sbjct: 92 G-TVAAAETGSGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRII 150
Query: 264 SGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY-- 321
+ S G P D + + A+ + V V AAGN ++ Y
Sbjct: 151 TMSLGGPTDSEELH-------DAVKYAVS-----NNVSVVCAAGNEGDGREDTNEFAYPA 198
Query: 322 -INSIYTIAIASAREDGQSPFYSE-ECTGLIATAYSGGISDP-VKIITTDVHNTCTCEHS 378
N + + A + S F + E ++A P V I +T ++ E S
Sbjct: 199 AYNEVIAVG-AVDFDLRLSDFTNTNEEIDIVA---------PGVGIKST-YLDSGYAELS 247
Query: 379 GTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSE--REPLSHVSGWERNARDL---W 433
GT+ AAP AG LAL + + R + L R A +
Sbjct: 248 GTAMAAPHVAGALALIINLAEDAFKRS------LSETEIYAQL------VRRATPIGFTA 295
Query: 434 FHSAYGFGLINTFKLVS 450
GF ++ + ++
Sbjct: 296 QAEGNGFLTLDLVERIT 312
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A
{Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A
2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Length = 320
Score = 105 bits (264), Expect = 3e-25
Identities = 64/330 (19%), Positives = 113/330 (34%), Gaps = 72/330 (21%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPR--NKHGTRCAGE 214
+ + + + ++D G++Y H D+ + A + + ++ + D N HGT G
Sbjct: 27 SVSVIQVAVLDTGVDYDHPDLAANIAW----CVSTLRGKVSTKLRDCADQNGHGTHVIGT 82
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIE-------------------SK 251
+ NN VGV G ++ V++LD G +D+
Sbjct: 83 IAAL-NNDIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGII 141
Query: 252 ALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKY 311
A D ++ S S G P D + I + G++ V A+GN
Sbjct: 142 AGDPDDDAAEVISMSLGGPADDSYLY-------DMIIQAY-----NAGIVIVAASGN--- 186
Query: 312 NGDNCAADGY-INSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTDV 369
+ + Y IA+ + + +S +S P V I++T
Sbjct: 187 --EGAPSPSYPAAYPEVIAVGAIDSNDNIASFS---------NRQPEVSAPGVDILST-Y 234
Query: 370 HNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILA--WTSE--REPLSHVSGW 425
+ GT+ A P +GV+AL A + + R L
Sbjct: 235 PDDSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGIL------ 288
Query: 426 ERNARDLW---FHSAYGFGLINTFKLVSLA 452
A DL + + YG+G++ V A
Sbjct: 289 HITADDLGPTGWDADYGYGVVRAALAVQAA 318
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus}
SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A
1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A
1q5p_A* 1st3_A 1c9n_A*
Length = 269
Score = 102 bits (257), Expect = 1e-24
Identities = 63/299 (21%), Positives = 114/299 (38%), Gaps = 70/299 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G+GV + ++D G+ TH D+ +F + +D N HGT AG +
Sbjct: 23 GSGVKVAVLDTGI-STHPDLNIR----GGASFVPGEPS----TQD-GNGHGTHVAG-TIA 71
Query: 218 KPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-KVDIYSGSWGPPDD 272
NNS +GV A + VK+L G + + + L++ + + + + S G P
Sbjct: 72 ALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQ--GLEWAGNNGMHVANLSLGSPSP 129
Query: 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC----AADGYINSIYTI 328
+++ A++ +GVL V A+GN + +
Sbjct: 130 SATLE-------QAVNSATS-----RGVLVVAASGNS--GAGSISYPARYAN------AM 169
Query: 329 AIASAREDGQSPFYSE--ECTGLIATAYSGGISDP-VKIITTDVHNTCTCEHSGTSAAAP 385
A+ + ++ +S+ ++A P V + +T + +GTS A P
Sbjct: 170 AVGATDQNNNRASFSQYGAGLDIVA---------PGVNVQST-YPGSTYASLNGTSMATP 219
Query: 386 IAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLIN 444
AG AL + NP+ + ++ L + A L + YG GL+N
Sbjct: 220 HVAGAAALVKQKNPSWSNVQIRNHL---------------KNTATSLGSTNLYGSGLVN 263
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide,
hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP:
c.41.1.1
Length = 671
Score = 106 bits (266), Expect = 2e-24
Identities = 69/361 (19%), Positives = 117/361 (32%), Gaps = 73/361 (20%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPR--NKHGTRCAGEL 215
G + + ++D G++ TH D++ Y + + P D GT AG +
Sbjct: 153 GTNIIVAVVDTGVDGTHPDLEGQVIA--GYRPAFD--EELPAGTDSSYGGSAGTHVAGTI 208
Query: 216 VMKPNNSKCGVGVCYGARVGGVKLLD--------GETTDLIESKALQFGLDK-VDIYSGS 266
K + K VGV GA++ + + D G D + + + D + + S
Sbjct: 209 AAK-KDGKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHS 267
Query: 267 WGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC---AADGYIN 323
WG G K A D + GV+ V +AGN + + G
Sbjct: 268 WG-------GWGYSYTMKEAFDYAME-----HGVVMVVSAGNNTSDSHHQYPAGYPG--- 312
Query: 324 SIYTIAIASAREDGQSP---FYSEECTGL----------IATAYSGGISDPVKIITTDVH 370
I +A+ G + +S I + G S + +V
Sbjct: 313 ---VIQVAALDYYGGTFRVAGFS--SRSDGVSVGAPGVTILSTVPGEDSIGYEGHNENVP 367
Query: 371 NTCTCEH---SGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWER 427
T + GTS AAP GV+A+ L+ PN + +L E
Sbjct: 368 ATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLL---------------EN 412
Query: 428 NARDLW---FHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYASSWQR 484
A D + G+GL+ + + + + G+ + S R
Sbjct: 413 TAFDFNGNGWDHDTGYGLVKLDAALQGPLPTQGGVEEFQVVVTDAKGNFGVPTVFVSMMR 472
Query: 485 S 485
Sbjct: 473 D 473
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase;
1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A
2zwo_A
Length = 395
Score = 103 bits (259), Expect = 4e-24
Identities = 63/329 (19%), Positives = 113/329 (34%), Gaps = 70/329 (21%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPR--NKHGTRCAGE 214
+ + + + ++D G++Y H D+ + A + + ++ + D N HGT G
Sbjct: 102 SVSVIQVAVLDTGVDYDHPDLAANIAW----CVSTLRGKVSTKLRDCADQNGHGTHVIGT 157
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIE-------------------SK 251
+ NN VGV G ++ V++LD G +D+
Sbjct: 158 IAAL-NNDIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGII 216
Query: 252 ALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKY 311
A D ++ S S G P D + I + G++ V A+GN
Sbjct: 217 AGDPDDDAAEVISMSLGGPADDSYLY-------DMIIQAYN-----AGIVIVAASGNE-- 262
Query: 312 NGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTDVH 370
+ + + + A D + F + +S P V I++T
Sbjct: 263 GAPSPSYPAAYPEVIAVG-AIDSNDNIASFSN----------RQPEVSAPGVDILSTYPD 311
Query: 371 NTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILA--WTSE--REPLSHVSGWE 426
++ GT+ A P +GV+AL A + + R L
Sbjct: 312 DS-YETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGIL------H 364
Query: 427 RNARDLW---FHSAYGFGLINTFKLVSLA 452
A DL + + YG+G++ V A
Sbjct: 365 ITADDLGPTGWDADYGYGVVRAALAVQAA 393
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Length = 347
Score = 102 bits (256), Expect = 6e-24
Identities = 61/369 (16%), Positives = 106/369 (28%), Gaps = 74/369 (20%)
Query: 121 TDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDS 180
WY + + L V + ++D G+ +
Sbjct: 17 ASARAEKPWY-----FDA------IGLTETTMSLTDKNTPVVVSVVDSGVAFIGGLSDSE 65
Query: 181 FAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGV-GVCYGARVGGVKL 239
FA ++F + + + HGT A + S+ G+ GV A + ++
Sbjct: 66 FA---KFSFTQDGSPFPVKKSEALYIHGTAMASLIA-----SRYGIYGVYPHALISSRRV 117
Query: 240 LD----GETTDLIES-KALQFGLDK-VDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIRE 293
+ IES + F I + S G K + ++ G
Sbjct: 118 IPDGVQDSWIRAIESIMSNVFLAPGEEKIINISGG----QKGVASASVWTELLSRMGRN- 172
Query: 294 GRQGKGVLFVFAAGNGKYNGDNCAAD---------------GYINSIYTIAIASAREDGQ 338
L V A GN + +A + + +A A A+
Sbjct: 173 ----NDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVA-ALAQYRKG 227
Query: 339 SPFYSEECTGLIATAYSGGISDP------VKIITTDVHNTCTCEHSGTSAAAPIAAGVLA 392
G T G + I T SGTS A I +GVLA
Sbjct: 228 ETPVLH---GGGITGSRFGNNWVDIAAPGQNITFLRPDAK-TGTGSGTSEATAIVSGVLA 283
Query: 393 LALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLA 452
NP T + + L ++++ P + D ++N K +S+
Sbjct: 284 AMTSCNPRATATELKRTLLESADKYP---------SLVDKV----TEGRVLNAEKAISMF 330
Query: 453 KNWVNVPAQ 461
+P +
Sbjct: 331 CKKNYIPVR 339
>3t41_A Epidermin leader peptide processing serine protea; structural
genomics, center for structural genomics of infec
diseases, csgid; 1.95A {Staphylococcus aureus} PDB:
3qfh_A
Length = 471
Score = 99 bits (249), Expect = 2e-22
Identities = 54/346 (15%), Positives = 109/346 (31%), Gaps = 73/346 (21%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKD-------SFAPELSYNFNAEKWDITPRYEDPRNKHGTR 210
A I IID G+ H+D+K+ + P + + + R HGT
Sbjct: 145 HANTKIAIIDTGVMKNHDDLKNNFSTDSKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTM 204
Query: 211 CAGELVMKPNNSKCGVGVCYGARVGGVKLLD---GETTDLIESKALQFGLD-KVDIYSGS 266
+G+ N K +GV + ++ E + + A+ + + + S
Sbjct: 205 VSGQTS---ANGK-LIGVAPNNKFTMYRVFGSKKTELLWVSK--AIVQAANDGNQVINIS 258
Query: 267 WG-----PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY 321
G +D ++ K+ A+ + I ++ K + V AAGN + ++
Sbjct: 259 VGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKK-KKSIVVAAAGNDGIDVNDKQKLKL 317
Query: 322 INSIYT--------------IAIASAREDGQSPFYS-----------------EECTGLI 350
+ + S + +S +
Sbjct: 318 QREYQGNGEVKDVPASMDNVVTVGSTDQKSNLSEFSNFGMNYTDIAAPGGSFAYLNQFGV 377
Query: 351 ATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEA-NPNMTWRDCQHI 409
+ G I+TT + +GT+ A P +G LAL ++ + +
Sbjct: 378 DKWMNEGYMHKENILTTANNGR-YIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIEL 436
Query: 410 LAWTSEREPLSHVSGWERNARDLW--FHSAYGFGLINTFKLVSLAK 453
L ++ S YG G ++ +K +++A
Sbjct: 437 L---------------YQHGTSKNNKPFSRYGHGELDVYKALNVAN 467
>1kn6_A Prohormone convertase 1; beta-alpha-beta-BETA-alpha-beta,
hydrolase; NMR {Mus musculus} SCOP: d.58.3.3
Length = 90
Score = 90.4 bits (224), Expect = 3e-22
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 2 HVGVERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPE 61
H F+N+W I G + A+ +A++LG+ G I L+NHYLF K H ++
Sbjct: 2 HHHHHHKRQFVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLENHYLFKHKSHPRRSRR 61
Query: 62 ETTFETVGLLNDARVIWTQQQFAKHLRKR 90
T L +D RV W +QQ+ K KR
Sbjct: 62 SALHITKRLSDDDRVTWAEQQYEKERSKR 90
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A
{Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Length = 340
Score = 95.9 bits (239), Expect = 9e-22
Identities = 71/389 (18%), Positives = 120/389 (30%), Gaps = 112/389 (28%)
Query: 122 DEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSF 181
D+ + QW+ + + V+ ++ G V + ++D G+ H D+ +
Sbjct: 4 DQHYREQWH-----YFDRY---GVKADKVW-DMGFTGQNVVVAVVDTGI-LHHRDLNANV 53
Query: 182 APELSYNF-------------------------NAEKWDITPRYEDPR--NKHGTRCAGE 214
P Y+F N ++ + HG+ AG
Sbjct: 54 LP--GYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRPDPRKERSDSSWHGSHVAGT 111
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD---GETTDLIE---------SKALQFGLDKVDI 262
+ NN GV YGA+V V+ L G +D+ + + + +
Sbjct: 112 IAAVTNNRIGVAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPENRNPAKV 171
Query: 263 YSGSWGPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD 319
+ S G G+ S IDR G L V AAGN N N
Sbjct: 172 INMSLG---------SDGQCSYNAQTMIDRAT-----RLGALVVVAAGNENQNASNTWPT 217
Query: 320 GYINSIYTIAIASAREDGQSPFYSEECTGL----------IATAYSGGISDPVKIITTDV 369
N +++ + G +S G+ I + G PV
Sbjct: 218 SCNN---VLSVGATTSRGIRASFS--NYGVDVDLAAPGQDILSTVDSGTRRPV------- 265
Query: 370 HNTCTCEHSGTSAAAPIAAGVLALAL----EANPNMTWRDCQHILAWTSEREPLSHVSGW 425
+ +GTS A P +GV AL + N N+T + + +L
Sbjct: 266 -SDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVL--------------- 309
Query: 426 ERNARDL--WFHSAYGFGLINTFKLVSLA 452
A G G+++ V+
Sbjct: 310 VSTTSPFNGRLDRALGSGIVDAEAAVNSV 338
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase,
hydrolase, phosphoprotein, protease; 3.14A {Drosophila
melanogaster}
Length = 1354
Score = 96.1 bits (238), Expect = 1e-20
Identities = 85/567 (14%), Positives = 177/567 (31%), Gaps = 96/567 (16%)
Query: 20 SGDPDIANQVAQDLGFHYNGIINGLDNHYL---------FSKKQHNHKTPEETTFETVGL 70
GD D+ +V D NG I GL + L + + + ++ + +
Sbjct: 74 CGDVDMKKKVTPD----ENGNIKGLSGNSLKLSPELMALNTDPEKAVRVGLKSFSDLLPS 129
Query: 71 LNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWY 130
++ + + R++ E + D+ +
Sbjct: 130 KVRNNIVAQAKLKHWDKPHKTATANASRKIVEFESQNPGEASK-----LPWDKKILKENL 184
Query: 131 EQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDD---------------GMEYTHE 175
+ + + NS +K+ +I Y + A + I+D +
Sbjct: 185 DFELEMLNSYEKVYGDIKTSYDCILFPTADGWLTIVDTTEQGDLDQALRIGEYSRTHETR 244
Query: 176 DIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVG 235
++ D + S N + E + + HGT + ++ GV A++
Sbjct: 245 NVDDFLSI--SVNVHDEGNVLEVVGMS--SPHGTHVSSIASGNHSSRDV-DGVAPNAKIV 299
Query: 236 GVKLLDGE------TTDLIESKALQFGLD------KVDIYSGSWGPPDDGKSMDGPGKLS 283
+ + DG T L+ +A+ ++ ++D+ + S+G + + G+L
Sbjct: 300 SMTIGDGRLGSMETGTALV--RAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGELM 357
Query: 284 KAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAI-ASAREDGQSPFY 342
+++ GV++V +AGN I+ I + A Y
Sbjct: 358 NEVVNK--------YGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEY 409
Query: 343 S--EECTGLIATAYSGG----------ISDP-VKIITTDVHNTCTCEH-SGTSAAAPIAA 388
+ E+ G + T S + P I + + +GTS AAP A
Sbjct: 410 AMREKLPGNVYTWTSRDPCIDGGQGVTVCAPGGAIASVPQFTMSKSQLMNGTSMAAPHVA 469
Query: 389 GVLALALEA----NPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLIN 444
G +AL + N + + ++ T+ L +V + G GL+N
Sbjct: 470 GAVALLISGLKQQNIEYSPYSIKRAISVTA--TKLGYVDPFA-----------QGHGLLN 516
Query: 445 TFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHV 504
K ++ VG++ R D ++ + +
Sbjct: 517 VEKAFEHLTEHRQSKDNML-RFSVRVGNNADKGIHL---RQGVQRNSIDYNVYIEPIFYN 572
Query: 505 HATLNIEHPRRGDVRIELTAPSGVKSV 531
+ + +VR+ L A
Sbjct: 573 DKEADPKDKFNFNVRLNLIASQPWVQC 599
>4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase,
patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A
Length = 360
Score = 89.5 bits (222), Expect = 1e-19
Identities = 54/320 (16%), Positives = 94/320 (29%), Gaps = 69/320 (21%)
Query: 155 NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPR--NKHGTRCA 212
I D G++ ++ + P +D N H
Sbjct: 87 TPEDYAAFQSIRDQGLKGKEKEEAL--------------EAVIPDTKDRIVLNDHACHVT 132
Query: 213 GELVMKPNNSKCGV-GVCYGARVGGVKLL---DGETTDLIESKALQFGLD-----KVDIY 263
+V + ++ V G+ RV + G D++ L +D +I
Sbjct: 133 STIVGQEHS---PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANII 189
Query: 264 SGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC-----AA 318
++ ++ AI + VL V GN N +
Sbjct: 190 HCAFC---RPTQTSEGEEILVQAIKKCQD-----NNVLIVSPTGN---NSNESWCLPAVL 238
Query: 319 DGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTDVHNTCTCEH 377
G T+A+ +A+ DG +S G T GI P +I+
Sbjct: 239 PG------TLAVGAAKVDGTPCHFS--NWGGNNTKE--GILAPGEEILGAQPCTEEPVRL 288
Query: 378 SGTSAAAPIAAGVLALAL----EANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLW 433
+GTS AAP+ G+ AL + + + + L T+ P E R
Sbjct: 289 TGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTA--IPCD-PEVVEEPER--- 342
Query: 434 FHSAYGFGLINTFKLVSLAK 453
G +N + +
Sbjct: 343 ----CLRGFVNIPGAMKVLF 358
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL
receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Length = 692
Score = 83.9 bits (207), Expect = 5e-17
Identities = 61/276 (22%), Positives = 100/276 (36%), Gaps = 57/276 (20%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAP--ELSYNFNAEKWDITPRYEDPR--NKHGTRCAG 213
G+ V + ++D ++ H + ++ N + D T + + HGT AG
Sbjct: 177 GSLVEVYLLDTSIQSDHRE----IEGRVMVTDFENVPEEDGTRFHRQASKCDSHGTHLAG 232
Query: 214 ELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKV--DIYSGSW 267
+ + GV GA + +++L+ G + + GL+ +
Sbjct: 233 VVSGR------DAGVAKGASMRSLRVLNCQGKGTVSGTLI------GLEFIRKSQLVQPV 280
Query: 268 GPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GYIN 323
GP + G S+ A R R GV+ V AAGN + D C
Sbjct: 281 GP--LVVLLPLAGGYSRVLNAACQRLAR-----AGVVLVTAAGN--FRDDACLYSPASAP 331
Query: 324 SIYTIAIASAREDGQSPFYSEE-----CTGLIATAYSGGISDP-VKIITTDVH-NTCTCE 376
+ T+ A+ +D + C L A P II +TC
Sbjct: 332 EVITVG-ATNAQDQPVTLGTLGTNFGRCVDLFA---------PGEDIIGASSDCSTCFVS 381
Query: 377 HSGTSAAAPIAAGVLALALEANPNMTWRD-CQHILA 411
SGTS AA AG+ A+ L A P +T + Q ++
Sbjct: 382 QSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIH 417
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart
disease, hypercholest low density lipoprotein receptor,
autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens}
PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B
3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Length = 546
Score = 81.9 bits (202), Expect = 2e-16
Identities = 63/280 (22%), Positives = 102/280 (36%), Gaps = 65/280 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAP--ELSYNFNAEKWDITPRYEDPR--NKHGTRCAG 213
G+ V + ++D ++ H + ++ N + D T + + HGT AG
Sbjct: 25 GSLVEVYLLDTSIQSDHRE----IEGRVMVTDFENVPEEDGTRFHRQASKCDSHGTHLAG 80
Query: 214 ELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKV--DIYSGSW 267
+ + GV GA + +++L+ G + + GL+ +
Sbjct: 81 VVSGR------DAGVAKGASMRSLRVLNCQGKGTVSGTLI------GLEFIRKSQLVQPV 128
Query: 268 GPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNC-----AAD 319
GP + G S+ A R R GV+ V AAGN + D C +A
Sbjct: 129 GP--LVVLLPLAGGYSRVLNAACQRLAR-----AGVVLVTAAGN--FRDDACLYSPASAP 179
Query: 320 GYINSIYTIAIASAREDGQSPFYSEE-----CTGLIATAYSGGISDP-VKIITTDVH-NT 372
I T+ A+ +D + C L A P II +T
Sbjct: 180 EVI----TVG-ATNAQDQPVTLGTLGTNFGRCVDLFA---------PGEDIIGASSDCST 225
Query: 373 CTCEHSGTSAAAPIAAGVLALALEANPNMTWRD-CQHILA 411
C SGTS AA AG+ A+ L A P +T + Q ++
Sbjct: 226 CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIH 265
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation,
psychrotrophic, subtilisin-like proteinase, depentent,
hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Length = 284
Score = 77.3 bits (191), Expect = 7e-16
Identities = 67/259 (25%), Positives = 97/259 (37%), Gaps = 59/259 (22%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G GV +ID G+ HE+ F ++ D D N HGT AG +
Sbjct: 28 GFGVTAYVIDTGVNNNHEE----FGGRSVSGYDFVDNDADS--SD-CNGHGTHVAGTIGG 80
Query: 218 KPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-------KVDIYSGS 266
GV + GV++L G T+ +I G+D + + S
Sbjct: 81 S------QYGVAKNVNIVGVRVLSCSGSGTTSGVIS------GVDWVAQNASGPSVANMS 128
Query: 267 WGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GYINSI 325
G ++D +A+ I+ GV F+ AAGN N D C + S
Sbjct: 129 LGGGQS-TALD-------SAVQGAIQ-----SGVSFMLAAGNS--NADACNTSPARVPSG 173
Query: 326 YTIAIASAREDGQSPFYSE--ECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAA 383
T+ ++ D +S F S C L A P I + ++ SGTS A
Sbjct: 174 VTVG-STTSSDSRSSF-SNWGSCVDLFA---------PGSQIKSAWYDGGYKTISGTSMA 222
Query: 384 APIAAGVLALALEANPNMT 402
P AGV AL L+ N +T
Sbjct: 223 TPHVAGVAALYLQENNGLT 241
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding,
inhibitor, hydrolase-hydro inhibitor complex; HET: PMS;
1.95A {Thermus aquaticus}
Length = 276
Score = 76.5 bits (189), Expect = 1e-15
Identities = 71/274 (25%), Positives = 101/274 (36%), Gaps = 68/274 (24%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFN--AEK-WDITPRYEDPRNKHGTRCAGE 214
G GVN+ +ID G+ TH + F A +D N HGT AG
Sbjct: 30 GRGVNVYVIDTGIRTTHRE------------FGGRARVGYDALGGNGQDCNGHGTHVAGT 77
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKVDIYSGSWGPP 270
+ GV + V++LD G T+ +I G+D W
Sbjct: 78 IGGV------TYGVAKAVNLYAVRVLDCNGSGSTSGVIA------GVD--------WVTR 117
Query: 271 DDGK----SMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GYI 322
+ + +M G +S A A+ I GV++ AAGN N + C +
Sbjct: 118 NHRRPAVANMSLGGGVSTALDNAVKNSIA-----AGVVYAVAAGN--DNANACNYSPARV 170
Query: 323 NSIYTIAIASAREDGQSPFYSE-ECTGLIATAYSGGISDP-VKIITTDVH-NTCTCEHSG 379
T+ A+ D ++ F + C L A P I + +T T +G
Sbjct: 171 AEALTVG-ATTSSDARASFSNYGSCVDLFA---------PGASIPSAWYTSDTATQTLNG 220
Query: 380 TSAAAPIAAGVLALALEANPNMTWRD-CQHILAW 412
TS A P AGV AL LE NP+ T IL
Sbjct: 221 TSMATPHVAGVAALYLEQNPSATPASVASAILNG 254
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K,
subtilase, psychrotrophic, psychrophilic, hydrolase;
1.80A {Serratia SP}
Length = 278
Score = 74.9 bits (185), Expect = 4e-15
Identities = 68/262 (25%), Positives = 103/262 (39%), Gaps = 63/262 (24%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFA--PELSYNFNAEKWDITPRYEDPRNKHGTRCAGEL 215
G+GV +ID G+ TH + F Y+F +D D N HGT AG +
Sbjct: 30 GSGVTAFVIDTGVLNTHNE----FGGRASSGYDFIDNDYD----ATD-CNGHGTHVAGTI 80
Query: 216 VMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD---KVDIYSGSWG 268
GV V GV++L+ G + +I + + + + + S G
Sbjct: 81 GGS------TYGVAKNVNVVGVRVLNCSGSGSNSGVI--AGINWVKNNASGPAVANMSLG 132
Query: 269 PPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GYINS 324
G S+A A++ + G+ FV AAGN N + C
Sbjct: 133 -----------GGASQATDDAVNAAVA-----AGITFVVAAGND--NSNACNYSPARAAD 174
Query: 325 IYTIAIASAREDGQSPFYSE--ECTGLIATAYSGGISDP-VKIITTDV-HNTCTCEHSGT 380
T+ ++ D +S F S C + A P I ++ N+ T SGT
Sbjct: 175 AITVG-STTSNDSRSSF-SNYGTCLDIYA---------PGSSITSSWYTSNSATNTISGT 223
Query: 381 SAAAPIAAGVLALALEANPNMT 402
S A+P AGV AL L+ NPN++
Sbjct: 224 SMASPHVAGVAALYLDENPNLS 245
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert
beta barrel domain hydrolase; HET: PMS; 1.40A
{Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Length = 441
Score = 74.8 bits (184), Expect = 2e-14
Identities = 46/270 (17%), Positives = 83/270 (30%), Gaps = 43/270 (15%)
Query: 155 NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGE 214
+ I IID G + +H D+ + N + P N HGT AG
Sbjct: 18 DSQAGNRTICIIDSGYDRSHNDLNANNVT--GTNNSGTGNWYQP---GNNNAHGTHVAGT 72
Query: 215 LVMKPNNSKC-GVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD--KVDIYSGSW 267
+ NN GV A + VK+ + G ++ L+ A+ ++ ++ + S
Sbjct: 73 IAAIANNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLV--AAIDTCVNSGGANVVTMSL 130
Query: 268 GPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNC-----AADGYI 322
G G + A++ GVL + AAGN GD+ + D
Sbjct: 131 G-------GSGSTTTERNALNTHY-----NNGVLLIAAAGN---AGDSSYSYPASYDS-- 173
Query: 323 NSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSA 382
+++A+ + +S+ + + I + +T G S
Sbjct: 174 ----VMSVAAVDSNLDHAAFSQYTDQVEISGPGEAI---LSTVTVGEGRLADITIGGQSY 226
Query: 383 AAPIAAGVLALALEANPNMTWRDCQHILAW 412
+ L
Sbjct: 227 FSNGVVPHNRLTPSGTSYAPAPINASATGA 256
Score = 56.3 bits (136), Expect = 1e-08
Identities = 26/202 (12%), Positives = 48/202 (23%), Gaps = 33/202 (16%)
Query: 263 YSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYI 322
+ ++ G + + + + G + N G
Sbjct: 266 SFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDA 325
Query: 323 NSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSA 382
NS T+ S ++ + + +GTS
Sbjct: 326 NSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYY---------------NGTSM 370
Query: 383 AAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDL---WFHSAYG 439
A P +GV L +P + + L A DL + G
Sbjct: 371 ATPHVSGVATLVWSYHPECSASQVRAAL---------------NATADDLSVAGRDNQTG 415
Query: 440 FGLINTFKLVSLAKNWVNVPAQ 461
+G+IN + P
Sbjct: 416 YGMINAVAAKAYLDESCTGPTD 437
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A
{Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A
2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A
2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A*
3gt4_A* 3l1k_A 3osz_A ...
Length = 279
Score = 71.8 bits (177), Expect = 4e-14
Identities = 65/272 (23%), Positives = 92/272 (33%), Gaps = 65/272 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFN--AEK-WDITPRYEDPRNKHGTRCAGE 214
G G + +ID G+E +H + F A+ D N HGT CAG
Sbjct: 30 GQGSCVYVIDTGIEASHPE------------FEGRAQMVKTYYYSSRD-GNGHGTHCAGT 76
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIE------SKALQFGLDKVDIYS 264
+ + GV ++ GVK+LD G+ + +I S K + S
Sbjct: 77 VGSRT------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVAS 130
Query: 265 GSWGPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-G 320
S G G S + A R GV+ AAGN N D
Sbjct: 131 LSLG-----------GGYSSSVNSAAARLQS-----SGVMVAVAAGN--NNADARNYSPA 172
Query: 321 YINSIYTIAIASAREDGQSPFYSE-ECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSG 379
S+ T+ AS R D +S F + + P I + T SG
Sbjct: 173 SEPSVCTVG-ASDRYDRRSSFSNYGSVLDIFG---------PGTDILSTWIGGSTRSISG 222
Query: 380 TSAAAPIAAGVLALALEANPNMTWRDCQHILA 411
TS A P AG+ A + C++I
Sbjct: 223 TSMATPHVAGLAAYLMTLGKTTAASACRYIAD 254
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle-
degrading protease, nematodes, hydrolase, secreted,
zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A
Length = 279
Score = 71.5 bits (176), Expect = 5e-14
Identities = 66/271 (24%), Positives = 91/271 (33%), Gaps = 63/271 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFA--PELSYNFNAEKWDITPRYEDPRNKHGTRCAGEL 215
GAG + +ID G+E TH D F + ++ + D + HGT CAG +
Sbjct: 31 GAGACVYVIDTGVEDTHPD----FEGRAKQIKSYASTARD--------GHGHGTHCAGTI 78
Query: 216 VMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIE------SKALQFGLDKVDIYSG 265
K GV + GVK+LD G +++I S + + S
Sbjct: 79 GSK------TWGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASM 132
Query: 266 SWGPPDDGKSMDGPGKLSKA---AIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAAD-GY 321
S G G S A A R GV AAGN N D
Sbjct: 133 SLG-----------GGYSAALNQAAARLQS-----SGVFVAVAAGND--NRDAANTSPAS 174
Query: 322 INSIYTIAIASAREDGQSPFYSE-ECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGT 380
++ T+ A+ D +S F + + A P IT+ T SGT
Sbjct: 175 EPTVCTVG-ATDSNDVRSTFSNYGRVVDIFA---------PGTSITSTWIGGRTNTISGT 224
Query: 381 SAAAPIAAGVLALALEANPNMTWRDCQHILA 411
S A P AG+ A C I
Sbjct: 225 SMATPHIAGLAAYLFGLEGGSAGAMCGRIQT 255
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 42.5 bits (99), Expect = 4e-04
Identities = 23/207 (11%), Positives = 58/207 (28%), Gaps = 30/207 (14%)
Query: 19 ISGDPDIANQVAQDLGFHY--NGIINGLDNHY---LFSK--KQHNHKTPEET------TF 65
+ + + ++ H + L L K P E
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330
Query: 66 ETVG-LLNDARVIWTQQQFAKHLRKRAEIQ---------ELRRQLRAMSQIYRKETEVSK 115
+ + D W + + I+ E R+ +S ++ +
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS-VFPPSAHIP- 388
Query: 116 YEGMFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHE 175
+ + W+ + + ++ K + P ++I + + + + H
Sbjct: 389 -TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447
Query: 176 DIKDSFAPELSYNFNAEKWDITPRYED 202
I D + ++ + D+ P Y D
Sbjct: 448 SIVDHYNIPKTF----DSDDLIPPYLD 470
Score = 37.5 bits (86), Expect = 0.012
Identities = 69/491 (14%), Positives = 132/491 (26%), Gaps = 150/491 (30%)
Query: 170 MEYTHEDIKDSFAPELSYNFNAEKWDITPRYED-PRNKHGTRCAGELVMKPNNSKCGVGV 228
+Y ++DI F NF+ + D+ +D P++ ++M +
Sbjct: 14 HQYQYKDILSVFEDAFVDNFDCK--DV----QDMPKSILSKEEIDHIIMSKD-------- 59
Query: 229 CYGARVGGVKLLDGETTDLIESK----ALQF--GLDKVDIYS---GSWGPPDDGKSMD-- 277
V G L + SK +F + +++ Y SM
Sbjct: 60 ----AVSGTLRL----FWTLLSKQEEMVQKFVEEVLRIN-YKFLMSPIKTEQRQPSMMTR 110
Query: 278 -----------GPGKLSKAAIDRG-----IREG----RQGKGVLFVFAAGNGK--YNGDN 315
+K + R +R+ R K VL G+GK D
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 316 CAADGYI----NSIYTIAIASAREDG------QSPFYSEECTGLIATAYSGGISDPV--- 362
C + I+ + + + Q Y + + +S I +
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 363 -----KIITTDVHNTCTCEHSGTSAAAPIAAGVLALALE--ANPNMTWR----DCQHILA 411
+++ + + C L L L N W C+ IL
Sbjct: 231 QAELRRLLKSKPYENC-----------------L-LVLLNVQNAK-AWNAFNLSCK-ILL 270
Query: 412 WTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNV-----PAQAKCEI 466
T ++ +S L H + L L K +++ P +
Sbjct: 271 TTRFKQVTDFLSAATTTHISL-DHHSMTLTPDEVKSL--LLK-YLDCRPQDLPREV-LTT 325
Query: 467 ALDVGSSTGFS---YASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPR--------- 514
S S ++W ++ D + + + ++LN+ P
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVN--CDKLTTI-----IESSLNVLEPAEYRKMFDRL 378
Query: 515 ---RGDVRIELTAPSGVKSVL---MEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFEI 568
I P+ + S++ + +S L K E I
Sbjct: 379 SVFPPSAHI----PTILLSLIWFDVIKSDVMVVVNKLHKYS-LVEKQPKES-----TISI 428
Query: 569 FDTKYDGLLDF 579
L+
Sbjct: 429 ----PSIYLEL 435
Score = 28.3 bits (62), Expect = 9.4
Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 51/179 (28%)
Query: 24 DIANQVAQDLGFHYNGIINGLDNHYLFSKK-QHNHKTPEETTFETVGLLNDARVIWTQQQ 82
++ ++ + H I++ HY K + P D
Sbjct: 434 ELKVKLENEYALH-RSIVD----HYNIPKTFDSDDLIPPY---------LDQYFYS---H 476
Query: 83 FAKHLRK--RAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLSNSS 140
HL+ E L R + F D ++ EQ R +++
Sbjct: 477 IGHHLKNIEHPERMTLFRMV-------------------FLD----FRFLEQKIRHDSTA 513
Query: 141 KKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTH--EDIKDSFAPELSYN-FNAEKWDI 196
+I+ Q+L I D+ +Y I D F P++ N ++ D+
Sbjct: 514 WNASGSILNTLQQLKFYKP----YICDNDPKYERLVNAILD-FLPKIEENLICSKYTDL 567
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus
pyogenes} PDB: 3eif_A*
Length = 926
Score = 42.4 bits (99), Expect = 5e-04
Identities = 35/221 (15%), Positives = 62/221 (28%), Gaps = 45/221 (20%)
Query: 148 VPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPEL----SYNFNAEKWDITPRYEDP 203
V QE GAG + +ID G + HE + + + + K + Y +
Sbjct: 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLTDKTKARYQSKEDLEKAKKEHGITYGEW 65
Query: 204 RNK-------------------HGTRCAGELVMKPNNSKCG----VGVCYGARVG----- 235
N HGT +G L + G A++
Sbjct: 66 VNDKVAYYHDYSKDGKTAVDQEHGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVE 125
Query: 236 GVKLLDGETTDLIES--KALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIRE 293
V L + ++ A+ + + S+G + +
Sbjct: 126 IVNGLADYARNYAQAIRDAIN---LGAKVINMSFG------NAALAYANLPDETKKAFDY 176
Query: 294 GRQGKGVLFVFAAGN-GKYNGDNCAADGYINSIYTIAIASA 333
+ KGV V +AGN + G + +A
Sbjct: 177 AKS-KGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAA 216
Score = 35.4 bits (81), Expect = 0.067
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 378 SGTSAAAPIAAGVLALALEANPNM 401
SGTS +AP+ AG++ L +
Sbjct: 404 SGTSMSAPLVAGIMGLLQKQYETQ 427
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET:
DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Length = 621
Score = 39.7 bits (92), Expect = 0.003
Identities = 43/187 (22%), Positives = 63/187 (33%), Gaps = 44/187 (23%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDS-FAP---------ELSYNFNAEKWDITPR-------- 199
+ + + ++D G+ D F+P E S NF + I R
Sbjct: 21 ESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGRPI 80
Query: 200 ----YEDPR--NKHGTRCAGELV--MKPNNSKCGV------GVCYGARVGGVKLL--DGE 243
PR N HGT A + + G+ G AR+ K+ DG
Sbjct: 81 SPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGC 140
Query: 244 TTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKL-SKAAIDRGIREGRQGKGVLF 302
+ I + D VDI S S G + + S A++RGI L
Sbjct: 141 SDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGI---------LT 191
Query: 303 VFAAGNG 309
+AGNG
Sbjct: 192 SNSAGNG 198
Score = 32.3 bits (73), Expect = 0.51
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 378 SGTSAAAPIAAGVLALALEANPNMT 402
SGTS + P G+ NP +
Sbjct: 412 SGTSMSCPHITGIATYVKTYNPTWS 436
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 38.1 bits (88), Expect = 0.010
Identities = 40/251 (15%), Positives = 70/251 (27%), Gaps = 92/251 (36%)
Query: 2 HVGVERAEHFLNQWVVHISGDPDIANQVAQDLGFHYNGI------INGLDNHYLFSK-KQ 54
+GV E + + + + +D + G+ I+ L + +
Sbjct: 305 FIGVRCYEAY---------PNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNK 355
Query: 55 HNHKTPEETTFETVGLLNDAR--VI----WTQQQFAKHLRKRAEIQELRRQLRA-MSQIY 107
N P E + L+N A+ V+ + LRK L Q R S+
Sbjct: 356 TNSHLPAGKQVE-ISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLD-QSRIPFSE-- 411
Query: 108 RKETEV-----------SKY-----EGMFTD------EWWPMQW----YE----QDYRLS 137
RK S + + D + Y+ D R+
Sbjct: 412 RKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVL 471
Query: 138 NSSKKLDLNIV------PVYQEL--------------------------NINGAGVNIII 165
+ S + IV PV E N +G GV +I+
Sbjct: 472 SGS--ISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIV 529
Query: 166 IDDGMEYTHED 176
++ +D
Sbjct: 530 AGT-LDINPDD 539
Score = 38.1 bits (88), Expect = 0.010
Identities = 90/517 (17%), Positives = 153/517 (29%), Gaps = 157/517 (30%)
Query: 5 VERAEHFLNQWVVHISG--DPDIANQVAQDL-----GFHYNGIINGLDNHYLFSKKQHNH 57
E FL ++S +P Q Q L F N + G D H L +K +
Sbjct: 58 AELVGKFLG----YVSSLVEPSKVGQFDQVLNLCLTEFE-NCYLEGNDIHALAAKLLQEN 112
Query: 58 KTPEETTFETVGLLNDARVIWTQQQFAKH----LRKRAEIQELR---------------R 98
T T E + AR++ ++ F K L + +
Sbjct: 113 DTTLVKTKELIKNYITARIM-AKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFE 171
Query: 99 QLRAMSQIYRK----------------ETEVSKYEGMFTDEWWPMQWYEQDYRLSNSSKK 142
+LR + Q Y E +FT ++W L N S
Sbjct: 172 ELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEW------LENPSNT 225
Query: 143 LD---LNIVPVYQELNINGAG--VNIIIIDDGMEYTHEDIKDSF---------------- 181
D L +P+ + G + ++ + +T +++
Sbjct: 226 PDKDYLLSIPI--SCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAI 283
Query: 182 APELSY-NF--NAEK------WDITPRYEDPRNKHGTRC---AGELVMKPNNSK----CG 225
A S+ +F + K + I G RC + P+ +
Sbjct: 284 AETDSWESFFVSVRKAITVLFF-I-----------GVRCYEAYPNTSLPPSILEDSLENN 331
Query: 226 VGV-CYGARVGGV------KLLDGETTDLIESKALQFGL----DKVDIYSGSWGPPDDGK 274
GV + + ++ + L K ++ L + + SG PP +
Sbjct: 332 EGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL-VVSG---PP---Q 384
Query: 275 SMDG-PGKLSKAAIDRGIREGR----QGKGV-----LFVFAAGNGKYNGDNCAADGYINS 324
S+ G L KA G+ + R + K L V + + A+D
Sbjct: 385 SLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVP--ASDLINKD 442
Query: 325 IYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDP-VKIITTD-VH--NTCTCE--H- 377
+ ++ +D Q P Y G SG IS+ V I V T + H
Sbjct: 443 LVKNNVSFNAKDIQIPVYDTF-DGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHI 501
Query: 378 -----SGTSAAAP----IAAG-----VLALALEANPN 400
G S G ++A L+ NP+
Sbjct: 502 LDFGPGGASGLGVLTHRNKDGTGVRVIVAGTLDINPD 538
Score = 31.2 bits (70), Expect = 1.2
Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 35/132 (26%)
Query: 434 FHSAYGFGLINTFKLVS--LAKNWVNVPAQAKCEIALDV-GSSTGFSYASSWQR-SFNIT 489
FHS L+ L++ L KN V+ A+ +I + V + G S + S +I+
Sbjct: 427 FHSHL---LVPASDLINKDLVKNNVSFNAK---DIQIPVYDTFDG----SDLRVLSGSIS 476
Query: 490 PCSDTVDEVKYLEHVH--ATLNIE--H-----P----RRGDVRIELTAPSGVKSVL---M 533
VD + V T + H P G + +GV+ ++ +
Sbjct: 477 E--RIVDCI-IRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIVAGTL 533
Query: 534 EPRPQDDCKTGF 545
+ P DD GF
Sbjct: 534 DINPDDD--YGF 543
Score = 29.2 bits (65), Expect = 5.5
Identities = 25/159 (15%), Positives = 44/159 (27%), Gaps = 58/159 (36%)
Query: 429 ARDLW------FHSAYGFGLINTFKLVSLAKNWVNVPAQAKCEIALDVGSSTGFSYASSW 482
A+D+W F YGF +++ N P + + G G
Sbjct: 1642 AQDVWNRADNHFKDTYGFSILDIVI---------NNPV----NLTIHFGGEKG------- 1681
Query: 483 QRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDC- 541
+R I Y + T+ + + E+ S + +
Sbjct: 1682 KR---IR--------ENYSAMIFETIVDGKLKTEKIFKEINEHS---TSYTFRSEKGLLS 1727
Query: 542 KTGF-------VDWSIL-TLKHWGEDP---------VGE 563
T F ++ + LK G P +GE
Sbjct: 1728 ATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGE 1766
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET:
NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Length = 649
Score = 37.0 bits (85), Expect = 0.015
Identities = 37/192 (19%), Positives = 56/192 (29%), Gaps = 50/192 (26%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAP----------ELSYNFNAEKW------------- 194
G V + ++D G+ +D P + FNA
Sbjct: 23 GQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFNKG 82
Query: 195 ------DITPRYEDPR--NKHGTRCAG--------ELVMKPNNSKCGVGVCYGARVGGVK 238
+ R + HGT CA + GV AR+ K
Sbjct: 83 ILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYK 142
Query: 239 LL--DGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQ 296
+G T + + Q D VD+ S S+G D S A+ +G+
Sbjct: 143 FSFNEGTFTSDLIAAMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGV----- 197
Query: 297 GKGVLFVFAAGN 308
L +AGN
Sbjct: 198 ----LVSASAGN 205
Score = 36.7 bits (84), Expect = 0.022
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 350 IATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHI 409
I AY + I T + +T SGTS AAP AAG+ A+ A+P + +
Sbjct: 396 ILAAYPPNVF-ATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSA 454
Query: 410 LAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFK 447
+ T++ + + + G G ++ +
Sbjct: 455 MMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNR 492
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 34.5 bits (79), Expect = 0.12
Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 20/118 (16%)
Query: 148 VPVYQELNING-AGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYE---DP 203
+P E ++ G + I + + D A ++ +NA+ + I+ DP
Sbjct: 958 IPETGEYSVKLLKGATLYI-PKALRF---DRL--VAGQIPTGWNAKTYGISDDIISQVDP 1011
Query: 204 RNKHGTRCAGE------LVMKPNNSK----CGVGVCYGARVGGVKLLDGETTDLIESK 251
E + K VG C G+ +GGV L G D + +
Sbjct: 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDE 1069
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 29.7 bits (66), Expect = 1.8
Identities = 9/67 (13%), Positives = 25/67 (37%), Gaps = 14/67 (20%)
Query: 78 WTQQQFAKHLRKRAEIQELRRQLRAMSQIYRKETEVSKYEGMFTDEWWPMQWYEQDYRLS 137
W +++ K L++ + + + +K+ +EW + EQ +
Sbjct: 90 W-REEQRKRLQELDA--ASKVMEQEWREKAKKD----------LEEWN-QRQSEQVEKNK 135
Query: 138 NSSKKLD 144
+++ D
Sbjct: 136 INNRIAD 142
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural
genomics, NPPSFA, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens}
Length = 146
Score = 29.1 bits (65), Expect = 2.2
Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Query: 44 LDNHYLFSKKQHNHKTPEETTFETVGLL---NDARVIWTQQQFAKHLRKR 90
L+N F K ++ FE L N +V + A + +
Sbjct: 73 LENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTK 122
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like,
structural genomics, joint center for struc genomics,
JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Length = 205
Score = 28.9 bits (64), Expect = 3.8
Identities = 14/125 (11%), Positives = 45/125 (36%), Gaps = 6/125 (4%)
Query: 63 TTFETVGLLNDARVIWTQQQFAKHLRKRAEIQELRRQLRAMS--QIYRKETEV--SKYEG 118
F G + + + ++ A + + A+ + R + ++ ++ ++ V SK
Sbjct: 24 NVFCLYGNVEKVKFMKSKPGAA--MVEMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPA 81
Query: 119 MFTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIK 178
+ + + ++ Y+ + S+ + + I + + +E T E+
Sbjct: 82 IMPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFF 141
Query: 179 DSFAP 183
+
Sbjct: 142 EICDE 146
>2r6a_C DNAG primase, helicase binding domain, replicative helicase;
replication, DNAB; 2.90A {Geobacillus
stearothermophilus} PDB: 2r6c_G 1z8s_A*
Length = 143
Score = 28.2 bits (63), Expect = 4.1
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 5 VERAEHFLNQWVVHISGDPDIANQVAQDLGFHYN 38
+ AE L ++ D+A V + +G +N
Sbjct: 6 FQNAERLLLAHMMR---SRDVALVVQERIGGRFN 36
>3lo7_A PBPA, penicillin-binding protein A; transpeptidase domain, cell
membrane, cell shape, cell WALL biogenesis/degradation,
membrane; 2.05A {Mycobacterium tuberculosis}
Length = 483
Score = 28.8 bits (65), Expect = 5.4
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 370 HNTCTCEHSGTSAAAPIAAGVLALALEANP 399
+ +G + AAPI V+ AL+ P
Sbjct: 454 NGADRLSATGGALAAPIGRAVIEAALQGEP 483
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 27.9 bits (62), Expect = 8.0
Identities = 12/47 (25%), Positives = 15/47 (31%), Gaps = 6/47 (12%)
Query: 539 DDCKTG------FVDWSILTLKHWGEDPVGEWKFEIFDTKYDGLLDF 579
DC +G F + E F FD DG +DF
Sbjct: 36 RDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDF 82
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.135 0.422
Gapped
Lambda K H
0.267 0.0750 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 9,520,485
Number of extensions: 594450
Number of successful extensions: 1526
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1390
Number of HSP's successfully gapped: 62
Length of query: 586
Length of database: 6,701,793
Length adjustment: 99
Effective length of query: 487
Effective length of database: 3,937,614
Effective search space: 1917618018
Effective search space used: 1917618018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (26.8 bits)