RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5372
(586 letters)
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 334
Score = 181 bits (458), Expect = 1e-52
Identities = 152/336 (45%), Positives = 218/336 (64%), Gaps = 9/336 (2%)
Query: 121 TDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKDS 180
TD +P QWY LS +++ DLN+ + G G+ + I+DDG+E H D+ +
Sbjct: 6 TDPKFPQQWY-----LSGVTQR-DLNVKEAW-AQGFTGHGIVVSILDDGIEKNHPDLAGN 58
Query: 181 FAPELSYNFNAEKWDITPRYEDPR-NKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239
+ P S++ N + D PRY N+HGTRCAGE+ NN CGVGV Y AR+GGV++
Sbjct: 59 YDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRM 118
Query: 240 LDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKG 299
LDGE TD +E+++L + + IYS SWGP DDGK++DGP +L++ A RG+ +GR G G
Sbjct: 119 LDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLG 178
Query: 300 VLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGIS 359
+FV+A+GNG D+C DGY NSIYT++I+SA + G P+YSE C+ +AT YS G
Sbjct: 179 SIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQ 238
Query: 360 DPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPL 419
+ +I+TTD+ CT H+GTSA+AP+AAG++AL LEAN N+TWRD QH++ TS+ L
Sbjct: 239 NEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL 298
Query: 420 SHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNW 455
+ W N +YG+GL++ +V+LA+NW
Sbjct: 299 NA-DDWATNGVGRKVSHSYGYGLLDAGAMVALAQNW 333
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 339
Score = 177 bits (449), Expect = 3e-51
Identities = 142/336 (42%), Positives = 201/336 (59%), Gaps = 9/336 (2%)
Query: 120 FTDEWWPMQWYEQDYRLSNSSKKLDLNIVPVYQELNINGAGVNIIIIDDGMEYTHEDIKD 179
D + QW+ + S D+N++ ++ NI GAGV I+DDG++Y +ED+KD
Sbjct: 12 INDPLFERQWHLVNPSFPGS----DINVLDLWYN-NITGAGVVAAIVDDGLDYENEDLKD 66
Query: 180 SFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVMKPNNSKCGVGVCYGARVGGVKL 239
+F E S++FN PR D + HGTRCAGE+ K N+ CGVGV Y A++ G+++
Sbjct: 67 NFCAEGSWDFNDNTNLPKPRLSD--DYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRI 124
Query: 240 LDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKG 299
L G+ T E+ +L +GLD DIYS SWGP DDG+ + GP L K A+ +G+ EGR KG
Sbjct: 125 LSGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKG 184
Query: 300 VLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGIS 359
++VFA+GNG GDNC DGY NSIY+I I + P YSE C+ ++A YS
Sbjct: 185 AIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYS--SG 242
Query: 360 DPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPL 419
I ++D++ C+ H GTSAAAP+AAGV L LEANPN+TWRD Q++ ++
Sbjct: 243 SGEYIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEK 302
Query: 420 SHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNW 455
+ W +A + YGFG I+ KL+ ++K W
Sbjct: 303 NADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTW 338
>d1p8ja1 b.18.1.20 (A:443-578) Furin, C-terminal domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 136
Score = 107 bits (267), Expect = 5e-28
Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 458 VPAQAKCEIALDVGSSTGFSYASSWQRSFNITPCSDTVDEVKYLEHVHATLNIEHPRRGD 517
V Q KC + + V + +T C + + LEHV A L + + RRGD
Sbjct: 2 VAPQRKCIVEILVEPKD---IGKRLEVRKAVTACLGEPNHITRLEHVQARLTLSYNRRGD 58
Query: 518 VRIELTAPSGVKSVLMEPRPQDDCKTGFVDWSILTLKHWGEDPVGEWKFEIFDTKYDG 575
+ I L +P G +S L+ RP D GF DW+ +T W EDP GEW EI +T
Sbjct: 59 LAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEAN 116
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens,
Novo/BPN' [TaxId: 1390]}
Length = 281
Score = 102 bits (254), Expect = 8e-25
Identities = 69/313 (22%), Positives = 110/313 (35%), Gaps = 50/313 (15%)
Query: 148 VPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKH 207
P G+ V + +ID G++ +H D+K + + + + N H
Sbjct: 13 APALHSQGYTGSNVKVAVIDSGIDSSHPDLKVAG----GASMVPSETNPF----QDNNSH 64
Query: 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLD-KVDI 262
GT AG V NNS +GV A + VK+L G+ + +I +++ + +D+
Sbjct: 65 GTHVAGT-VAALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIIN--GIEWAIANNMDV 121
Query: 263 YSGSWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYI 322
+ S G P ++ + GV+ V AAGN +G +
Sbjct: 122 INMSLGGPSGSAALKAA------------VDKAVASGVVVVAAAGNEGTSGSSSTVGYPG 169
Query: 323 NSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSA 382
IA+ + Q +S L A P I + + ++GTS
Sbjct: 170 KYPSVIAVGAVDSSNQRASFSSVGPELDVMA-------PGVSIQSTLPGNKYGAYNGTSM 222
Query: 383 AAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGL 442
A+P AG AL L +PN T + L T L YG GL
Sbjct: 223 ASPHVAGAAALILSKHPNWTNTQVRSSLENT---------------TTKLGDSFYYGKGL 267
Query: 443 INTFKLVSLAKNW 455
IN +
Sbjct: 268 INVQAAAQHHHHH 280
>d2id4a1 b.18.1.20 (A:461-601) Kexin, C-terminal domain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 141
Score = 95.1 bits (236), Expect = 9e-24
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 485 SFNITPCSDTVDEVKYLEHVHATLNIEHPRRGDVRIELTAPSGVKSVLMEPRPQDDCKTG 544
I+ S K +EHV T++I+ RG ++L +P+G+ S L RP+D G
Sbjct: 29 VITISEKSLQDANFKRIEHVTVTVDIDTEIRGTTTVDLISPAGIISNLGVVRPRDVSSEG 88
Query: 545 FVDWSILTLKHWGEDPVGEWKFEIFDTKY 573
F DW+ +++ HWGE+ VG+WK ++ T+
Sbjct: 89 FKDWTFMSVAHWGENGVGDWKIKVKTTEN 117
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp.,
AK.1 [TaxId: 1409]}
Length = 280
Score = 91.2 bits (225), Expect = 5e-21
Identities = 61/302 (20%), Positives = 106/302 (35%), Gaps = 51/302 (16%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
++ +G I +ID G++YTH D ++ ++ D P + H A
Sbjct: 25 DVTKGSSGQEIAVIDTGVDYTHPD----LDGKVIKGYDFVDNDYDPMDLNNHGTH---VA 77
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKVDIYSGSWG 268
G + NN+ G+ R+ V+ LD G +D+ ++ IY+ G
Sbjct: 78 GIAAAETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIADA----------IIYAADSG 127
Query: 269 PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTI 328
S+ KG + V AAGN + A Y N I
Sbjct: 128 AEVINLSLGCD---CHTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPA-SYENVIAVG 183
Query: 329 AIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAA 388
A+ + +S T + A P I + + SGTS A+P A
Sbjct: 184 AVDQ---YDRLASFSNYGTWVDVVA-------PGVDIVSTITGNRYAYMSGTSMASPHVA 233
Query: 389 GVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKL 448
G+ AL + + + + T+++ +SG + +G IN++
Sbjct: 234 GLAALLA--SQGRNNIEIRQAIEQTADK-----ISGTGTY---------FKYGRINSYNA 277
Query: 449 VS 450
V+
Sbjct: 278 VT 279
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg
[TaxId: 1423]}
Length = 274
Score = 90.8 bits (224), Expect = 6e-21
Identities = 58/304 (19%), Positives = 96/304 (31%), Gaps = 45/304 (14%)
Query: 148 VPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKH 207
Q GA V + ++D G++ +H D+ +F A + + H
Sbjct: 13 ADKVQAQGFKGANVKVAVLDTGIQASHPDLNVVG----GASFVAGEAY--NTDGNGHGTH 66
Query: 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSW 267
V +N+ +GV + VK+L+ + I SG
Sbjct: 67 VAGT----VAALDNTTGVLGVAPSVSLYAVKVLNSSGSGSYS-----------GIVSGIE 111
Query: 268 GPPDDGKSMDGPGKLSKAAID--RGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSI 325
+G + + + + +GV+ V AAGN +G
Sbjct: 112 WATTNGMDVINMSLGGASGSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYD 171
Query: 326 YTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAP 385
IA+ + + +S L A G+ +GTS A+P
Sbjct: 172 SVIAVGAVDSNSNRASFSSVGAELEVMAPGAGVYSTY-------PTNTYATLNGTSMASP 224
Query: 386 IAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINT 445
AG AL L +PN++ ++ L+ T A L YG GLIN
Sbjct: 225 HVAGAAALILSKHPNLSASQVRNRLSST---------------ATYLGSSFYYGKGLINV 269
Query: 446 FKLV 449
Sbjct: 270 EAAA 273
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans
[TaxId: 93466]}
Length = 671
Score = 92.8 bits (229), Expect = 2e-20
Identities = 56/315 (17%), Positives = 100/315 (31%), Gaps = 47/315 (14%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G + + ++D G++ TH D++ Y ++ GT AG +
Sbjct: 153 GTNIIVAVVDTGVDGTHPDLEGQVIA--GYRPAFDEELPAGTDSSYGGSAGTHVAGTIAA 210
Query: 218 KPNNSKCGVGVCYGARVGGVKLLD--------GETTDLIESKALQFGLD-KVDIYSGSWG 268
K + VGV GA++ + + D G D + + + D + + SWG
Sbjct: 211 KKDGK-GIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWG 269
Query: 269 PPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTI 328
+M + V +AGN + + GY I
Sbjct: 270 GWGYSYTMKEAFDYAMEHGVV------------MVVSAGNNTSDSHHQYPAGYPGVIQVA 317
Query: 329 AIASAREDGQSPFYSEECTGLIATAYSGGI-----------SDPVKIITTDVHNTCTCEH 377
A+ + +S G+ A I + + +
Sbjct: 318 ALDYYGGTFRVAGFSSRSDGVSVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYY 377
Query: 378 SGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437
GTS AAP GV+A+ L+ PN + +L T+ +GW+
Sbjct: 378 QGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFN---GNGWDH---------D 425
Query: 438 YGFGLINTFKLVSLA 452
G+GL+ +
Sbjct: 426 TGYGLVKLDAALQGP 440
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]}
Length = 269
Score = 87.3 bits (215), Expect = 8e-20
Identities = 56/304 (18%), Positives = 99/304 (32%), Gaps = 50/304 (16%)
Query: 148 VPVYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKH 207
P + G+GV + ++D G+ TH D+ +F + + + H
Sbjct: 13 APAAHNRGLTGSGVKVAVLDTGIS-THPDLNI----RGGASFVPGEPS--TQDGNGHGTH 65
Query: 208 GTRCAGELVMKPNNSKCGVGVCYGARVGGVKLLD--GETTDLIESKALQFGLDKVDIYSG 265
NNS +GV A + VK+L G + ++ L++ + +
Sbjct: 66 VAGTIA----ALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVAN 121
Query: 266 SWGPPDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSI 325
+ +GVL V A+GN + A
Sbjct: 122 LSLGSPSPSATL-----------EQAVNSATSRGVLVVAASGNSGAGSISYPA----RYA 166
Query: 326 YTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAP 385
+A+ + ++ +S+ GL A P + + + +GTS A P
Sbjct: 167 NAMAVGATDQNNNRASFSQYGAGLDIVA-------PGVNVQSTYPGSTYASLNGTSMATP 219
Query: 386 IAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINT 445
AG AL + NP+ + ++ L T A L + YG GL+N
Sbjct: 220 HVAGAAALVKQKNPSWSNVQIRNHLKNT---------------ATSLGSTNLYGSGLVNA 264
Query: 446 FKLV 449
Sbjct: 265 EAAT 268
>d1kn6a_ d.58.3.3 (A:) Prohormone convertase 1 pro-domain {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 73
Score = 72.5 bits (178), Expect = 1e-16
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 11 FLNQWVVHISGDPDIANQVAQDLGFHYNGIINGLDNHYLFSKKQHNHKTPEETTFETVGL 70
F+N+W I G + A+ +A++LG+ G I L+NHYLF K H ++ T L
Sbjct: 1 FVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLENHYLFKHKSHPRRSRRSALHITKRL 60
Query: 71 LNDARVIWTQQQF 83
+D RV W +QQ+
Sbjct: 61 SDDDRVTWAEQQY 73
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId:
1421]}
Length = 309
Score = 75.7 bits (184), Expect = 1e-15
Identities = 50/300 (16%), Positives = 96/300 (32%), Gaps = 19/300 (6%)
Query: 153 ELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCA 212
G+G+NI ++D G+ +H D+ ++ +F I D N HGT A
Sbjct: 20 TSTTGGSGINIAVLDTGVNTSHPDLVNNVEQ--CKDFTGATTPINNSCTDR-NGHGTHVA 76
Query: 213 GELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDD 272
G + + + G+ + ++ D + +
Sbjct: 77 GTALADGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTII 136
Query: 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIAS 332
S+ ++ KGVL V AAGN Y+ G + + +A
Sbjct: 137 SMSLGSSAN---NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALE 193
Query: 333 AREDGQSPFYSEECTGLIATAYSGGISDPVKI--------ITTDVHNTCTCEHSGTSAAA 384
+ + ++ + + + I + + +N SGTS A
Sbjct: 194 NVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYNGGYNTISGTSMAT 253
Query: 385 PIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLIN 444
P +G+ A NP+++ + L ++ + G + A GFG
Sbjct: 254 PHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAA-----IGDDYASGFGFAR 308
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris
[TaxId: 2026]}
Length = 279
Score = 71.7 bits (174), Expect = 2e-14
Identities = 59/295 (20%), Positives = 95/295 (32%), Gaps = 49/295 (16%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G+G I I+D G++ H D+ + N N HGT CAG
Sbjct: 29 GSGAKIAIVDTGVQSNHPDLAGKVVGGWDFVDNDSTP-------QNGNGHGTHCAGIAAA 81
Query: 218 KPNNSKCGVGVCYGARVGGVKLL--DGETTDLIESKALQFGLD-KVDIYSGSWGPPDDGK 274
NNS G A + V++L G T + + + D + S S G
Sbjct: 82 VTNNSTGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTVGNS 141
Query: 275 SMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAR 334
+ + + V AAGN N IA+AS
Sbjct: 142 GLQQAVNYAWNKGS------------VVVAAAGNAGNTAPNY----PAYYSNAIAVASTD 185
Query: 335 EDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALA 394
++ +S + + A I + + SGTS A P AGV L
Sbjct: 186 QNDNKSSFSTYGSWVDVAAP-------GSSIYSTYPTSTYASLSGTSMATPHVAGVAGLL 238
Query: 395 LEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLV 449
+ + + + T+++ +SG + + G +N +K V
Sbjct: 239 ASQGR--SASNIRAAIENTADK-----ISGTG---------TYWAKGRVNAYKAV 277
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium
album), strain limber [TaxId: 37998]}
Length = 279
Score = 70.1 bits (170), Expect = 6e-14
Identities = 42/254 (16%), Positives = 72/254 (28%), Gaps = 29/254 (11%)
Query: 158 GAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELVM 217
G G + +ID G+E +H + + +Y +++ + GT + +
Sbjct: 30 GQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDG-----NGHGTHCAGTVGSRTYGV 84
Query: 218 KPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGPPDDGKSMD 277
GV V G + + K K + S S G
Sbjct: 85 AKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKN-NRNCPKGVVASLSLGGGYSSSVNS 143
Query: 278 GPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDG 337
+ Q GV+ AAGN + N + + ++
Sbjct: 144 AAAR-------------LQSSGVMVAVAAGNNNADARNY---SPASEPSVCTVGASDRYD 187
Query: 338 QSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEA 397
+ +S + L I T SGTS A P AG+ A +
Sbjct: 188 RRSSFSNYGSVLDIFGPGTDILSTW-------IGGSTRSISGTSMATPHVAGLAAYLMTL 240
Query: 398 NPNMTWRDCQHILA 411
C++I
Sbjct: 241 GKTTAASACRYIAD 254
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43,
N-terminal domain {Bacillus sp. KSM-KP43 [TaxId:
109322]}
Length = 318
Score = 68.8 bits (166), Expect = 3e-13
Identities = 47/325 (14%), Positives = 86/325 (26%), Gaps = 42/325 (12%)
Query: 150 VYQELNINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGT 209
+ G G + + D G++ D A + N HGT
Sbjct: 13 AQSSYGLYGQGQIVAVADTGLDTGRNDSSMH--EAFRGKITALYALGRTNNANDTNGHGT 70
Query: 210 RCAGELVMKPNNSKCGVGVCYGARVGGVKLLDGETTDLIESKALQFGLDKVDIYSGSWGP 269
AG ++ + +K + L L + + S G
Sbjct: 71 HVAGSVLGNGSTNKGMAPQAN-------LVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGA 123
Query: 270 PDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIA 329
S + R + + + + +FAAGN NG +A G + T+
Sbjct: 124 RIHTNSWGAAVNGAYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVG 183
Query: 330 IASAREDGQSPFYSEECTGLIATAYSGGISDPVKI--------------------ITTDV 369
+ ++ +K
Sbjct: 184 ATENLRPSFGSYADNINHVAQFSSRGPTKDGRIKPDVMAPGTFILSARSSLAPDSSFWAN 243
Query: 370 HNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNA 429
H++ GTS A PI AG +A E + L + A
Sbjct: 244 HDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALI----------AGA 293
Query: 430 RDL---WFHSAYGFGLINTFKLVSL 451
D+ + + G+G + K +++
Sbjct: 294 ADIGLGYPNGNQGWGRVTLDKSLNV 318
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas
sp., sedolisin [TaxId: 306]}
Length = 369
Score = 67.3 bits (163), Expect = 1e-12
Identities = 48/354 (13%), Positives = 87/354 (24%), Gaps = 64/354 (18%)
Query: 157 NGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGELV 216
A + II G F + T + G+
Sbjct: 23 TAANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQTIQTG---SSNGDYSDDQQGQ-G 78
Query: 217 MKPNNSKCGVGVCYGARVGGVKLLD----GETTDLIESKALQFGLDKVDIYSGSWGPPDD 272
+S+ VG GA + + T L ++ + + + S G +
Sbjct: 79 EWDLDSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEA 138
Query: 273 GKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNGDNCAADGY----------- 321
+ DG + +G F ++G+ N
Sbjct: 139 DANADGTLQAEDRIFATAAA-----QGQTFSVSSGDEGVYECNNRGYPDGSTYSVSWPAS 193
Query: 322 ------INSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISD--PVKIITTDVHNTC 373
+ ++ ++ + + A GG S + V T
Sbjct: 194 SPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYESKPSWQSVVSGTP 253
Query: 374 TCEH-------------------------SGTSAAAPIAAGVLALALEANPNMTWRDCQH 408
GTS A+PI G+ A AN N
Sbjct: 254 GRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWARLQSANSNSLGFPAAS 313
Query: 409 ILAWTSEREPLSH--VSGWERNARDLW-----FHSAYGFGLINTFKLVSLAKNW 455
+ S L H SG + + G+G ++ KL + ++
Sbjct: 314 FYSAISSTPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRSN 367
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus
novosp. MN-32, kumamolisin [TaxId: 198803]}
Length = 357
Score = 65.1 bits (157), Expect = 5e-12
Identities = 56/347 (16%), Positives = 88/347 (25%), Gaps = 62/347 (17%)
Query: 155 NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGE 214
++G G I II G Y + FA + P G +
Sbjct: 20 GLDGQGQCIAIIALGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQP---TGDPNGPD 76
Query: 215 LVMKPNNSKCGVGVCYGARVGGVKLLDGETTDL-IESKALQFGLDKVDIYSGSWGPPDDG 273
+ + + GA++ + + L + A+ K I S SWG P+D
Sbjct: 77 -GEVELDIEVAGALAPGAKIAVYFAPNTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDS 135
Query: 274 KSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNG----KYNGDNCAADGYINSIYTIA 329
+ +++A +D GV + AAG+ D S Y +A
Sbjct: 136 WAPASIAAMNRAFLDAA------ALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLA 189
Query: 330 IASAREDGQSPFYSEE------------------------CTGLIATAYSGGISDPVKII 365
R + E S
Sbjct: 190 CGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVPPSANPGAGSGRG 249
Query: 366 TTDVHNTC-------------TCEHSGTSAAAPIAAGVLALALEA--------NPNMTWR 404
DV T GTSA AP+ A ++A + NP +
Sbjct: 250 VPDVAGNADPATGYEVVIDGETTVIGGTSAVAPLFAALVARINQKLGKPVGYLNPTLYQL 309
Query: 405 DCQHILAWTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSL 451
+ T A W G G +L+
Sbjct: 310 PPEVFHDITEGNND-IANRARIYQAGPGW-DPCTGLGSPIGIRLLQA 354
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1
{Pseudoalteromonas sp. AS-11 [TaxId: 247492]}
Length = 435
Score = 54.3 bits (129), Expect = 2e-08
Identities = 55/302 (18%), Positives = 87/302 (28%), Gaps = 34/302 (11%)
Query: 155 NINGAGVNIIIIDDGMEYTHEDIKDSFAPELSYNFNAEKWDITPRYEDPRNKHGTRCAGE 214
+ I IID G + +H D+ + N + P N HGT AG
Sbjct: 18 DSQAGNRTICIIDSGYDRSHNDLNANNVT--GTNNSGTGNWYQP---GNNNAHGTHVAGT 72
Query: 215 LVMKPNNSK-CGVGVCYGARVGGVKLLDG----ETTDLIESKALQFGLDKVDIYSGSWGP 269
+ NN GV A + VK+ + ++ L+ + ++ + S G
Sbjct: 73 IAAIANNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGG 132
Query: 270 PDDGKSMDGPGKLSKAAIDRGIREGRQGKGVLFVFAAGNGKYNG-------DNCAADGYI 322
+R GVL + AAGN + D+ + +
Sbjct: 133 SGS------------TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAV 180
Query: 323 NSIYTIAIASAREDGQSPFYSEECTGLIATAYSGGISDPVKIITTDVHNTCTCEHSGTS- 381
+S A S D E T G ++D + N + T
Sbjct: 181 DSNLDHAAFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPS 240
Query: 382 ----AAAPIAAGVLALALEANPNMTWRDCQHILAWTSEREPLSHVSGWERNARDLWFHSA 437
A API A E N T C ++ E + +
Sbjct: 241 GTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKT 300
Query: 438 YG 439
G
Sbjct: 301 AG 302
Score = 50.1 bits (118), Expect = 4e-07
Identities = 32/168 (19%), Positives = 51/168 (30%), Gaps = 13/168 (7%)
Query: 292 REGRQGKGVLFVFAAGNGKYNGDNCAADGYINSIYTIAIASAREDGQSPFYSEECTGLIA 351
R G QG + + K G Y NS D S + A
Sbjct: 281 RVGNQGSSYPEINSTKACKTAGAKGIIV-YSNSALPGLQNPFLVDANSDITVPSVSVDRA 339
Query: 352 TAYSGGISDPVKIITTDVHNTCTCEHSGTSAAAPIAAGVLALALEANPNMTWRDCQHILA 411
T + ++ N ++GTS A P +GV L +P + + L
Sbjct: 340 TGLALKAKLGQSTTVSNQGNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALN 399
Query: 412 WTSEREPLSHVSGWERNARDLWFHSAYGFGLINTFKLVSLAKNWVNVP 459
T++ V+G + G+G+IN + P
Sbjct: 400 ATADDLS---VAGRDN---------QTGYGMINAVAAKAYLDESCTGP 435
>d3c0na2 f.8.1.1 (A:85-468) (Pro)aerolysin, pore-forming lobe
{Aeromonas hydrophila [TaxId: 644]}
Length = 384
Score = 27.9 bits (62), Expect = 3.4
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 23/92 (25%)
Query: 414 SEREPLSHVSGWERNARDL----------------WFHSAYGFGLINTFKLVSLAKNWVN 457
S+R+ + V GW N D W + +G KN
Sbjct: 108 SDRQLVKTVVGWAVNDSDTPQSGYDVTLRGDTATNWSKTN-TYG----LSEKVTTKNKFK 162
Query: 458 VPAQAKCEIALDVGSSTGFSYASSWQRSFNIT 489
P + E+++++ + S+AS S +
Sbjct: 163 WPLVGETELSIEI--AANQSWASQNGGSTTTS 192
>d1h67a_ a.40.1.1 (A:) Calponin {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 108
Score = 26.0 bits (57), Expect = 5.1
Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Query: 44 LDNHYLFSKKQHNHKTPEETTFETVGLL---NDARVIWTQQQFAKHLRKR 90
L+N F + ++ FE L N +V T A + +
Sbjct: 59 LENIGNFLRAIKHYGVKPHDIFEANDLFENTNHTQVQSTLIALASQAKTK 108
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.135 0.422
Gapped
Lambda K H
0.267 0.0627 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,347,020
Number of extensions: 114207
Number of successful extensions: 394
Number of sequences better than 10.0: 1
Number of HSP's gapped: 368
Number of HSP's successfully gapped: 25
Length of query: 586
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 496
Effective length of database: 1,171,896
Effective search space: 581260416
Effective search space used: 581260416
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.2 bits)