BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy538
(97 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2HJ98|FAHD1_BOVIN Acylpyruvase FAHD1, mitochondrial OS=Bos taurus GN=FAHD1 PE=2 SV=1
Length = 221
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%)
Query: 2 HAREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTG 61
++ GLPWT+ K F +CPVS F+P+ +I DP ++ LWLKVNGELRQ+ T M+F
Sbjct: 108 ECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHNLKLWLKVNGELRQEGETSSMIFSIP 167
Query: 62 DLISYISQHMTLEPYDLILTG 82
+ISY+S+ MTLE D+ILTG
Sbjct: 168 YIISYVSKIMTLEEGDIILTG 188
>sp|Q8R0F8|FAHD1_MOUSE Acylpyruvase FAHD1, mitochondrial OS=Mus musculus GN=Fahd1 PE=1
SV=2
Length = 227
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%)
Query: 1 KHAREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKT 60
+ ++ GLPWT+ K F ++CPVS F+P+ +I DP + LWLKVNGELRQ+ T M+F
Sbjct: 113 EECKKKGLPWTLAKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSI 172
Query: 61 GDLISYISQHMTLEPYDLILTG 82
+ISY+S+ +TLE DLILTG
Sbjct: 173 PYIISYVSKIITLEEGDLILTG 194
>sp|Q6AYQ8|FAHD1_RAT Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus GN=Fahd1
PE=2 SV=1
Length = 221
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%)
Query: 2 HAREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTG 61
++ GLPWT+ K F ++CPVS F+P+ +I DP + LWLKVNGELRQ+ T M+F
Sbjct: 108 ECKKKGLPWTLAKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSIP 167
Query: 62 DLISYISQHMTLEPYDLILTG 82
+ISY+S+ +TLE DLILTG
Sbjct: 168 YIISYVSKIITLEEGDLILTG 188
>sp|Q6P587|FAHD1_HUMAN Acylpyruvase FAHD1, mitochondrial OS=Homo sapiens GN=FAHD1 PE=1
SV=2
Length = 224
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%)
Query: 2 HAREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTG 61
++ GLPWT+ K F +CPVS F+P+ +I DP + LWLKVNGELRQ+ T M+F
Sbjct: 111 ECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIP 170
Query: 62 DLISYISQHMTLEPYDLILTG 82
+ISY+S+ +TLE D+ILTG
Sbjct: 171 YIISYVSKIITLEEGDIILTG 191
>sp|Q5RDW0|FAHD1_PONAB Acylpyruvase FAHD1, mitochondrial OS=Pongo abelii GN=FAHD1 PE=2
SV=1
Length = 224
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%)
Query: 2 HAREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTG 61
++ GLPWT+ K F +CPVS F+P+ +I DP + LWLKVNGELRQ+ T M+F
Sbjct: 111 ECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIP 170
Query: 62 DLISYISQHMTLEPYDLILTG 82
+ISY+S+ +TLE D+ILTG
Sbjct: 171 YIISYVSKIITLEEGDIILTG 191
>sp|Q86I22|FAHD1_DICDI Acylpyruvase FAHD1, mitochondrial OS=Dictyostelium discoideum
GN=fahd1 PE=3 SV=1
Length = 218
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 56/80 (70%)
Query: 3 AREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGD 62
A+ LPWTV KG+DT CP+S FIP+ +IKD ++V LW V+G+++QK T M+F
Sbjct: 104 AKAKSLPWTVSKGYDTFCPISGFIPKDKIKDLNNVELWCSVDGQIKQKGNTNQMIFDVPH 163
Query: 63 LISYISQHMTLEPYDLILTG 82
LI YIS MTLE DLILTG
Sbjct: 164 LIQYISSIMTLESGDLILTG 183
>sp|Q9UYW0|Y1397_PYRAB Uncharacterized protein PYRAB13970 OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=PYRAB13970 PE=3 SV=1
Length = 225
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%)
Query: 2 HAREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTG 61
AR+ G PWTV KGFDT P+ I + DP D+ + LKVNG++RQ T +M+FK
Sbjct: 109 EARKKGYPWTVSKGFDTFAPIGPRIVDKRELDPSDLEIGLKVNGKVRQLGRTSEMIFKIP 168
Query: 62 DLISYISQHMTLEPYDLILTG 82
+LI YIS MTLEP D+I TG
Sbjct: 169 ELIEYISSIMTLEPGDIIATG 189
>sp|O58377|Y643_PYRHO Uncharacterized protein PH0643 OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH0643 PE=3 SV=1
Length = 230
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 2 HAREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTG 61
AR+ G PWT+ KGFDT P+ + + DP D+ + LKVNG++RQ T M+FK
Sbjct: 114 EARKKGYPWTISKGFDTFAPIGPRVVDSRELDPSDLEIGLKVNGKIRQLGRTSQMIFKIP 173
Query: 62 DLISYISQHMTLEPYDLILTG 82
+LI YIS MTLEP D+I TG
Sbjct: 174 ELIEYISHIMTLEPGDIIATG 194
>sp|Q9P7L4|YOS9_SCHPO Uncharacterized hydrolase C21C3.09c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC21C3.09c PE=3 SV=1
Length = 221
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 1 KHAREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKT 60
A++ GLPW+ KG+DT PV IP+H I DP +V L L +NG++ QK +T ML K
Sbjct: 101 NEAKKKGLPWSFAKGYDTFLPVGPIIPKHLIPDPHNVILELSLNGKVVQKDSTSLMLNKI 160
Query: 61 GDLISYISQHMTLEPYDLILTG 82
+ S I++ M+L P DL+LTG
Sbjct: 161 PKIFSSITEAMSLNPGDLVLTG 182
>sp|P76004|YCGM_ECOLI Uncharacterized protein YcgM OS=Escherichia coli (strain K12)
GN=ycgM PE=1 SV=1
Length = 219
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 4 REHGLPWTVGKGFDTACPVSDFIPEHEIK-DPDDVPLWLKVNGELRQKSTTGDMLFKTGD 62
++ G PW K FD +CP+S FIP E DP + L L VNGE RQ+ TT DM+ K
Sbjct: 112 KKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLSLSVNGEQRQQGTTADMIHKIVP 171
Query: 63 LISYISQHMTLEPYDLILTG 82
LI+Y+S+ TL+ D++LTG
Sbjct: 172 LIAYMSKFFTLKAGDVVLTG 191
>sp|Q5RCX5|FAHD2_PONAB Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Pongo
abelii GN=FAHD2 PE=2 SV=1
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 4 REHGLPWTVGKGFDTACPVSD-FIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGD 62
R +G W +GK FDT CP+ + + + DP ++ + +VNGEL Q S T M+FKT D
Sbjct: 199 RRNGKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGELVQSSNTNQMVFKTED 258
Query: 63 LISYISQHMTLEPYDLILTGKAGFILMFQQSP 94
LI+++SQ +T P D+ILTG + +F++ P
Sbjct: 259 LIAWVSQFVTFYPGDVILTGTPPGVGVFRKPP 290
>sp|B2RYW9|FAHD2_RAT Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus
norvegicus GN=Fahd2 PE=1 SV=1
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 5 EHGLPWTVGKGFDTACPVS-DFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
+G W +GK FDT CP+ + + I DP ++ + +VNGE+ Q S T M+FKT DL
Sbjct: 199 RNGKQWLLGKTFDTFCPLGPALVTKDTIADPHNLKISCRVNGEIVQSSNTNQMVFKTEDL 258
Query: 64 ISYISQHMTLEPYDLILTGKAGFILMFQQSP 94
I+++SQ +TL P D++LTG + MF++ P
Sbjct: 259 IAWVSQFVTLYPGDILLTGTPPGVGMFRKPP 289
>sp|Q2KIB0|FAHD2_BOVIN Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Bos
taurus GN=FAHD2 PE=2 SV=1
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 6 HGLPWTVGKGFDTACPVSD-FIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLI 64
+G W +GK FDT CP+ + + + DP ++ + +VNGEL Q S T M+FKT +LI
Sbjct: 201 NGKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGELMQSSNTNQMVFKTEELI 260
Query: 65 SYISQHMTLEPYDLILTGKAGFILMFQQSP 94
+++SQ +TL P D+ILTG + +F++ P
Sbjct: 261 TWVSQFVTLYPGDIILTGTPPGVGVFRKPP 290
>sp|Q6P2I3|FAH2B_HUMAN Fumarylacetoacetate hydrolase domain-containing protein 2B OS=Homo
sapiens GN=FAHD2B PE=2 SV=1
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 4 REHGLPWTVGKGFDTACPVSD-FIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGD 62
R +G W +GK FDT CP+ + + + DP ++ + +VNGE+ Q S T M+FKT D
Sbjct: 199 RRNGKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTED 258
Query: 63 LISYISQHMTLEPYDLILTGKAGFILMFQQSP 94
LI+++SQ +T P D+ILTG + +F++ P
Sbjct: 259 LIAWVSQFVTFYPGDVILTGTPPGVGVFRKPP 290
>sp|Q3TC72|FAHD2_MOUSE Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Mus
musculus GN=Fahd2 PE=1 SV=1
Length = 313
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 5 EHGLPWTVGKGFDTACPVS-DFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
+G W +GK FDT CP+ + + I DP ++ + +VNGE+ Q S T M+FKT L
Sbjct: 199 RNGKQWLLGKTFDTFCPLGPALVTKDTIADPHNLKICCRVNGEVVQSSNTNQMVFKTEYL 258
Query: 64 ISYISQHMTLEPYDLILTGKAGFILMFQQSP 94
I+++SQ +TL P DL+LTG + MF++ P
Sbjct: 259 IAWVSQFVTLYPGDLLLTGTPPGVGMFRKPP 289
>sp|Q96GK7|FAH2A_HUMAN Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Homo
sapiens GN=FAHD2A PE=1 SV=1
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 4 REHGLPWTVGKGFDTACPVSD-FIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGD 62
R +G W +GK FDT CP+ + + + DP ++ + +VNGE+ Q T M+FKT D
Sbjct: 199 RRNGKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTED 258
Query: 63 LISYISQHMTLEPYDLILTGKAGFILMFQQSP 94
LI+++SQ +T P D+ILTG + +F++ P
Sbjct: 259 LIAWVSQFVTFYPGDVILTGTPPGVGVFRKPP 290
>sp|P34673|YO23_CAEEL Uncharacterized protein ZK688.3 OS=Caenorhabditis elegans
GN=ZK688.3 PE=3 SV=1
Length = 214
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 2 HAREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTG 61
A++ G PW + K FD +CP+ F+P +I +P DV L+ K+NG+ +Q+ T M+F
Sbjct: 105 EAKKAGAPWFLAKSFDGSCPIGGFLPVSDIPNPHDVELFCKINGKDQQRCRTDVMIFDIP 164
Query: 62 DLISYISQHMTLEPYDLILTG 82
L+ Y +Q TLE D++LTG
Sbjct: 165 TLLEYTTQFFTLEVGDVVLTG 185
>sp|Q6GLT8|FAHD2_XENLA Fumarylacetoacetate hydrolase domain-containing protein 2
OS=Xenopus laevis GN=fahd2 PE=2 SV=1
Length = 319
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 4 REHGLPWTVGKGFDTACPVSD-FIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGD 62
+++G W +GK FDT CP+ + + I DP ++ + +VNG+L Q S T M+FKT
Sbjct: 204 KKNGKQWLLGKTFDTFCPLGPALVTKDVISDPHNLGIRCRVNGDLVQNSNTNQMVFKTEA 263
Query: 63 LISYISQHMTLEPYDLILTGKAGFILMFQQSP 94
LI++ S+ +TL P D+ LTG + +F++ P
Sbjct: 264 LIAWASKFVTLNPGDVFLTGTPPGVGVFRKPP 295
>sp|A9ALD1|UGL_BURM1 Ureidoglycolate lyase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=Bmul_3283 PE=3 SV=1
Length = 282
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 EHGLPWTVGKGFDTACPVSDF-IPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
E G W GKGFDT P+ + + E+ DP + LWL+V+G Q T M+F L
Sbjct: 164 ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQSLDLWLEVDGHRYQNGNTRTMVFTVAQL 223
Query: 64 ISYISQHMTLEPYDLILTG 82
I+Y+S MTL+P D+I TG
Sbjct: 224 IAYLSSCMTLQPGDVITTG 242
>sp|B1Z1Y2|UGL_BURA4 Ureidoglycolate lyase OS=Burkholderia ambifaria (strain MC40-6)
GN=BamMC406_5393 PE=3 SV=1
Length = 282
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 EHGLPWTVGKGFDTACPVSDF-IPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
E G W GKGFDT P+ + + E+ DP V LWL+++G Q T M+F L
Sbjct: 164 ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRVDLWLEIDGHRYQNGNTRTMVFTVAQL 223
Query: 64 ISYISQHMTLEPYDLILTG 82
++Y+S MTL+P D+I TG
Sbjct: 224 VAYLSTCMTLQPGDVITTG 242
>sp|Q39BA7|UGL_BURS3 Ureidoglycolate lyase OS=Burkholderia sp. (strain 383)
GN=Bcep18194_B0137 PE=1 SV=1
Length = 282
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 EHGLPWTVGKGFDTACPVSDF-IPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
E G W GKGFDT P+ + + E+ DP + LWL+++G Q T M+F L
Sbjct: 164 ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQL 223
Query: 64 ISYISQHMTLEPYDLILTG 82
I+Y+S MTL+P D+I TG
Sbjct: 224 IAYLSSCMTLQPGDVITTG 242
>sp|Q0B628|UGL_BURCM Ureidoglycolate lyase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=Bamb_4846 PE=3 SV=1
Length = 282
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 EHGLPWTVGKGFDTACPVSDF-IPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
E G W GKGFDT P+ + + E+ DP + LWL+V+G Q T M+F L
Sbjct: 164 ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEVDGHRYQNGNTRTMVFTVAQL 223
Query: 64 ISYISQHMTLEPYDLILTG 82
++Y+S MTL+P D+I TG
Sbjct: 224 VAYLSTCMTLQPGDVITTG 242
>sp|B4EKX6|UGL_BURCJ Ureidoglycolate lyase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=BceJ2315_61450 PE=3 SV=1
Length = 282
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 EHGLPWTVGKGFDTACPVSDF-IPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
E G W GKGFDT P+ + + E+ DP + LWL+++G Q T M+F L
Sbjct: 164 ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQL 223
Query: 64 ISYISQHMTLEPYDLILTG 82
I+Y+S MTL+P D+I TG
Sbjct: 224 IAYLSTCMTLQPGDVITTG 242
>sp|B1K3Y3|UGL_BURCC Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain MC0-3)
GN=Bcenmc03_4750 PE=3 SV=1
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 EHGLPWTVGKGFDTACPVSDF-IPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
E G W GKGFDT P+ + + E+ DP + LWL+++G Q T M+F L
Sbjct: 164 ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQL 223
Query: 64 ISYISQHMTLEPYDLILTG 82
++Y+S MTL+P D+I TG
Sbjct: 224 VAYLSTCMTLQPGDVITTG 242
>sp|A0B3M8|UGL_BURCH Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain HI2424)
GN=Bcen2424_5521 PE=3 SV=1
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 EHGLPWTVGKGFDTACPVSDF-IPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
E G W GKGFDT P+ + + E+ DP + LWL+++G Q T M+F L
Sbjct: 164 ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQL 223
Query: 64 ISYISQHMTLEPYDLILTG 82
++Y+S MTL+P D+I TG
Sbjct: 224 VAYLSTCMTLQPGDVITTG 242
>sp|Q1BJJ1|UGL_BURCA Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain AU 1054)
GN=Bcen_5340 PE=3 SV=1
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 EHGLPWTVGKGFDTACPVSDF-IPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDL 63
E G W GKGFDT P+ + + E+ DP + LWL+++G Q T M+F L
Sbjct: 164 ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQL 223
Query: 64 ISYISQHMTLEPYDLILTG 82
++Y+S MTL+P D+I TG
Sbjct: 224 VAYLSTCMTLQPGDVITTG 242
>sp|Q59050|Y1656_METJA Uncharacterized protein MJ1656 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1656 PE=3 SV=1
Length = 237
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 10 WTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQ 69
WT K FDT CP+ I + DP ++ + +VNGE++QKS T +M+F +L+ +++
Sbjct: 135 WTRAKSFDTFCPIGPRIVKD--IDPMNLNIECRVNGEIKQKSNTKNMIFDVYELVEFVAS 192
Query: 70 HMTLEPYDLILTG 82
MTL P D+I TG
Sbjct: 193 IMTLYPGDIISTG 205
>sp|Q46978|HPAG_ECOLX 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase OS=Escherichia coli GN=hpaG PE=3
SV=1
Length = 429
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 22 VSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQHMTLEPYDLILT 81
+S +P+ I DP ++ L VNGELRQ+ TT D++F LI+Y+S+ MTL P D+I T
Sbjct: 334 LSTIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIAT 393
Query: 82 G 82
G
Sbjct: 394 G 394
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 9 PWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYIS 68
P K D CP+ + + + + D++ ++ ++NG T D+ L+S +S
Sbjct: 105 PAIKAKCRDGFCPIGETVA---LSNVDNLTIYTEINGRPADHWNTADLQRNAAQLLSALS 161
Query: 69 QHMTLEPYDLILTG 82
+ TL P D IL G
Sbjct: 162 EFATLNPGDAILLG 175
>sp|P37352|HPCE_ECOLX Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase
OS=Escherichia coli GN=hpcE PE=1 SV=2
Length = 427
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 22 VSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQHMTLEPYDLILT 81
+S +P+ I DP ++ L VNGELRQ+ TT D++F LI+Y+S+ MTL P D+I T
Sbjct: 334 LSTIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIAT 393
Query: 82 G 82
G
Sbjct: 394 G 394
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 9 PWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYIS 68
P K D CP+ + + + + D++ ++ ++NG T D+ L+S +S
Sbjct: 105 PAIKAKCRDGFCPIGETVA---LSNVDNLTIYTEINGRPADHWNTSDLQRNAAQLLSALS 161
Query: 69 QHMTLEPYDLILTG 82
+ TL P D IL G
Sbjct: 162 EFATLNPGDAILLG 175
>sp|Q9RPU5|HPAG_SALDU 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase OS=Salmonella dublin GN=hpaG
PE=3 SV=1
Length = 429
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 14 KGFDTACPVSDFIPEHE-IKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQHMT 72
K D P+ +I + E + DP ++ L VNGELRQ+ TT D++F LISY+S+ MT
Sbjct: 325 KSRDGLTPIGPWIVDKEAVSDPHNLTLRTFVNGELRQEGTTADLIFSIPFLISYLSEFMT 384
Query: 73 LEPYDLILTG 82
L+P D+I TG
Sbjct: 385 LQPGDMIATG 394
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 9 PWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYIS 68
P K D CP+ + P + D D++ + ++NG T D+ L+S +S
Sbjct: 105 PAIKAKCRDGFCPLGEMAP---LSDVDNLTIITEINGREADHWNTADLQRSAAQLLSALS 161
Query: 69 QHMTLEPYDLILTG 82
+ TL P D IL G
Sbjct: 162 EFATLNPGDAILLG 175
>sp|P53889|FMP41_YEAST Uncharacterized mitochondrial hydrolase FMP41 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FMP41 PE=1
SV=1
Length = 259
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 3 AREHGLPWTVGKGFDTACPVSDFIPEHEIKD-----PDDVPLWLKVNGELRQKSTTGDML 57
A++ GLPWT+ KGFDT P+S + + D + VNG+LRQ T ML
Sbjct: 131 AKKKGLPWTISKGFDTFMPISAIVSREKFSSYKSNLQDIFRVKCSVNGQLRQDGGTNLML 190
Query: 58 FKTGDLISYISQHMTLEPYDLILTG 82
++ +IS ++LEP D+ILTG
Sbjct: 191 HPLHKILQHISTMISLEPGDIILTG 215
>sp|O06724|YISK_BACSU Uncharacterized protein YisK OS=Bacillus subtilis (strain 168)
GN=yisK PE=2 SV=1
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 12 VGKGFDTACPVSD-FIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+GK DT CP+ + + I++P+ + + +VNGELRQ + DM+F +LI +S+
Sbjct: 194 IGKSLDTTCPMGPVLVHKSSIQEPERLKVETRVNGELRQSGSASDMIFSIPELIETLSKG 253
Query: 71 MTLEPYDLILTG 82
MTLE D+I TG
Sbjct: 254 MTLEAGDIIATG 265
>sp|O28058|Y2225_ARCFU Uncharacterized protein AF_2225 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2225 PE=3 SV=1
Length = 250
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 10 WTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQ 69
WT K FDT P+ +I EI DP + + +VNG++ QKS T +++F L+S++S
Sbjct: 141 WTRAKSFDTFAPLGPYI--AEIDDPSKLGIQTRVNGKVVQKSNTSNLIFDVFQLVSFVSS 198
Query: 70 HMTLEPYDLILTGKAGFILMFQ 91
MTL+ D+I TG + M +
Sbjct: 199 VMTLKAGDVIATGTPAGVGMLK 220
>sp|Q8CPT8|Y665_STAES Uncharacterized protein SE_0665 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_0665 PE=3 SV=1
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K ACP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGACPMGPYIVTKDELPAPENVNIVTKVNNEIRQDGNTGEMILKIDELIEKISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSPH 95
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGLQPPQ 276
>sp|Q5HQJ3|Y556_STAEQ Uncharacterized protein SERP0556 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0556 PE=3 SV=1
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K ACP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGACPMGPYIVTKDELPAPENVNIVTKVNNEIRQDGNTGEMILKIDELIEKISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSPH 95
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGLQPPQ 276
>sp|Q54BF3|FAHD2_DICDI Fumarylacetoacetate hydrolase domain-containing protein 2 homolog
OS=Dictyostelium discoideum GN=fahd2 PE=3 SV=1
Length = 305
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 4 REHGLPWTVGKGFDTACPVSDFI---PE------HEIKDPDDVPLWLKVNGELRQKSTTG 54
R++ W +GK FDT P+ I PE DP+++ + +NG++ Q STT
Sbjct: 181 RKNNSQWLLGKTFDTFAPIGPSIVINPEVAALSDDTYFDPNNLSIKCTLNGQVVQNSTTK 240
Query: 55 DMLFKTGDLISYISQHMTLEPYDLILTGK---AGFI 87
+ +F ++SY+S+ TL P D+I TG GFI
Sbjct: 241 EFIFNIQTVVSYLSKLFTLNPGDIIFTGTPSGVGFI 276
>sp|Q49WA8|Y1806_STAS1 Uncharacterized protein SSP1806 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1806 PE=3 SV=1
Length = 301
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CPV +I + E+ P+DV + KVN ++RQ TG M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPVGPYIVTKDELPTPEDVNIVTKVNNDIRQDGNTGQMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTG 82
+ L P D+I TG
Sbjct: 252 VALHPGDIIATG 263
>sp|Q6GIC0|Y930_STAAR Uncharacterized protein SAR0930 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR0930 PE=3 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSP 94
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGMQPP 275
>sp|Q5HHB6|Y973_STAAC Uncharacterized protein SACOL0973 OS=Staphylococcus aureus (strain
COL) GN=SACOL0973 PE=3 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSP 94
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGMQPP 275
>sp|Q99VC2|Y968_STAAM Uncharacterized protein SAV0968 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV0968 PE=1 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSP 94
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGMQPP 275
>sp|Q2FZT4|Y906_STAA8 Uncharacterized protein SAOUHSC_00906 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_00906 PE=3 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSP 94
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGMQPP 275
>sp|Q2FIA7|Y871_STAA3 Uncharacterized protein SAUSA300_0871 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_0871 PE=3 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSP 94
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGMQPP 275
>sp|Q7A1B6|Y850_STAAW Uncharacterized protein MW0850 OS=Staphylococcus aureus (strain
MW2) GN=MW0850 PE=3 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSP 94
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGMQPP 275
>sp|Q6GAV8|Y838_STAAS Uncharacterized protein SAS0838 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS0838 PE=3 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSP 94
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGMQPP 275
>sp|Q2YWW3|Y837_STAAB Uncharacterized protein SAB0837 OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB0837 PE=3 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSP 94
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGMQPP 275
>sp|Q7A6H3|Y829_STAAN Uncharacterized protein SA0829 OS=Staphylococcus aureus (strain
N315) GN=SA0829 PE=1 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN E+RQ TG+M+ K +LI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSP 94
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGMQPP 275
>sp|Q4L4Y4|Y1982_STAHJ Uncharacterized protein SH1982 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1982 PE=3 SV=1
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 12 VGKGFDTACPVSDFI-PEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLISYISQH 70
+ K CP+ +I + E+ P++V + KVN ++RQ T M+ K DLI IS++
Sbjct: 192 LSKSLTGGCPMGPYIVTKDELPTPENVNIVTKVNNDIRQDGNTSQMINKIDDLIEEISKY 251
Query: 71 MTLEPYDLILTGKAGFILMFQQSPH 95
+ L P D+I TG + Q P
Sbjct: 252 VALHPGDIIATGTPAGVGAGLQPPQ 276
>sp|O86042|NAGK_RALSP Fumarylpyruvate hydrolase OS=Ralstonia sp. GN=nagK PE=1 SV=1
Length = 192
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 3 AREHGLPWTVGKGFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGD 62
AR+ G PW GK + S+ +P + + + L+VNG+ +Q S +++ +
Sbjct: 82 ARDKGRPWDTGKDIEEGSVCSEIVPMQGVV-VEQGAIALEVNGQTKQSSNVDKLIWNVRE 140
Query: 63 LISYISQHMTLEPYDLILTG 82
+I+ +S + L+P DLI TG
Sbjct: 141 IIADLSTYYHLQPGDLIYTG 160
>sp|Q87VD5|GLNE_PSESM Glutamate-ammonia-ligase adenylyltransferase OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=glnE PE=3 SV=1
Length = 985
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 15 GFDTACPVSDFIPEHEIKDPDDVPLWLKVNGELRQKSTTGDMLFKTGDLIS 65
FD C SDF+ E +DP + L L +GEL + + G++ + D +S
Sbjct: 49 AFDRVCAASDFVTEQICRDP-QMLLQLAGSGELERSFSVGELRGQIADALS 98
>sp|P24151|NODC_RHILP N-acetylglucosaminyltransferase OS=Rhizobium leguminosarum bv.
phaseoli GN=nodC PE=3 SV=1
Length = 428
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 27 PEHEIKDP-DDVPLWLKVNGELRQKSTTGDMLFKTGDLISY-ISQHMTLEPYD 77
P+ ++ DP DD+ WL N E Q++ G ++F +G + Y + L+ YD
Sbjct: 173 PKRQLADPFDDMEYWLACNEERSQQARFGCVMFCSGSCVMYRLVSASLLDQYD 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,878,696
Number of Sequences: 539616
Number of extensions: 1688934
Number of successful extensions: 3640
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3564
Number of HSP's gapped (non-prelim): 59
length of query: 97
length of database: 191,569,459
effective HSP length: 66
effective length of query: 31
effective length of database: 155,954,803
effective search space: 4834598893
effective search space used: 4834598893
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)