Query psy5380
Match_columns 129
No_of_seqs 135 out of 1546
Neff 8.6
Searched_HMMs 29240
Date Sat Aug 17 01:06:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5380.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5380hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n2t_A Putative oxidoreductase 99.9 2.3E-26 7.9E-31 174.0 11.6 118 1-128 161-285 (348)
2 3eau_A Voltage-gated potassium 99.9 1.6E-26 5.6E-31 173.3 10.1 124 1-128 139-274 (327)
3 1lqa_A TAS protein; TIM barrel 99.9 2.3E-26 7.7E-31 173.5 10.9 124 1-128 164-293 (346)
4 3erp_A Putative oxidoreductase 99.9 4.3E-26 1.5E-30 172.8 11.0 122 1-128 174-303 (353)
5 3lut_A Voltage-gated potassium 99.9 5.3E-26 1.8E-30 173.1 10.8 124 1-128 173-308 (367)
6 1gve_A Aflatoxin B1 aldehyde r 99.9 1E-25 3.6E-30 169.0 11.3 124 1-128 124-264 (327)
7 3n6q_A YGHZ aldo-keto reductas 99.9 7.8E-26 2.7E-30 170.9 10.2 123 1-128 153-286 (346)
8 1pyf_A IOLS protein; beta-alph 99.9 6.6E-26 2.3E-30 169.1 9.3 118 1-128 140-264 (312)
9 1pz1_A GSP69, general stress p 99.9 1.2E-25 4.2E-30 169.2 9.7 118 1-128 140-265 (333)
10 2bp1_A Aflatoxin B1 aldehyde r 99.9 3.2E-25 1.1E-29 168.5 11.1 124 1-128 157-297 (360)
11 3v0s_A Perakine reductase; AKR 99.9 3.8E-25 1.3E-29 166.7 6.1 117 1-128 141-264 (337)
12 1ynp_A Oxidoreductase, AKR11C1 99.9 4.1E-23 1.4E-27 154.5 8.2 109 1-129 154-262 (317)
13 1ur3_M Hypothetical oxidoreduc 99.9 4E-22 1.4E-26 149.3 8.0 105 1-128 164-268 (319)
14 3krb_A Aldose reductase; ssgci 99.9 2.2E-22 7.7E-27 151.5 6.2 106 1-124 161-266 (334)
15 1afs_A 3-alpha-HSD, 3-alpha-hy 99.8 3E-21 1E-25 144.6 8.6 105 1-128 151-257 (323)
16 1qwk_A Aldose reductase, aldo- 99.8 2.1E-21 7E-26 145.2 6.4 112 1-128 138-250 (317)
17 3buv_A 3-OXO-5-beta-steroid 4- 99.8 3.9E-21 1.3E-25 144.2 7.8 105 1-128 154-260 (326)
18 1s1p_A Aldo-keto reductase fam 99.8 3.7E-21 1.3E-25 144.6 7.7 105 1-128 151-257 (331)
19 3f7j_A YVGN protein; aldo-keto 99.8 5.2E-21 1.8E-25 140.7 7.9 92 1-123 126-217 (276)
20 3b3e_A YVGN protein; aldo-keto 99.8 7.9E-21 2.7E-25 141.9 7.9 94 1-128 160-253 (310)
21 3o0k_A Aldo/keto reductase; ss 99.8 9.9E-21 3.4E-25 139.7 8.0 94 1-128 147-240 (283)
22 4f40_A Prostaglandin F2-alpha 99.8 3.8E-21 1.3E-25 142.1 5.7 94 1-128 138-231 (288)
23 4gac_A Alcohol dehydrogenase [ 99.8 6E-21 2E-25 142.7 6.4 104 1-128 146-249 (324)
24 2wzm_A Aldo-keto reductase; ox 99.8 1.2E-20 4.1E-25 139.3 7.3 94 1-128 132-225 (283)
25 1hw6_A 2,5-diketo-D-gluconic a 99.8 1.6E-20 5.3E-25 138.3 7.5 96 1-128 124-219 (278)
26 1us0_A Aldose reductase; oxido 99.8 1.8E-20 6E-25 140.0 7.6 106 1-128 145-250 (316)
27 1vbj_A Prostaglandin F synthas 99.8 1.4E-20 4.7E-25 138.8 6.3 94 1-128 129-222 (281)
28 1mzr_A 2,5-diketo-D-gluconate 99.8 2.2E-20 7.6E-25 138.7 7.4 96 1-128 144-239 (296)
29 3up8_A Putative 2,5-diketo-D-g 99.8 1.8E-20 6.3E-25 139.2 6.6 94 1-128 143-236 (298)
30 4gie_A Prostaglandin F synthas 99.8 2E-20 6.7E-25 138.5 6.7 97 1-128 133-229 (290)
31 1vp5_A 2,5-diketo-D-gluconic a 99.8 2.6E-20 8.8E-25 138.4 7.0 96 1-128 137-232 (298)
32 1zgd_A Chalcone reductase; pol 99.8 2.5E-20 8.6E-25 139.0 6.9 100 1-128 151-250 (312)
33 3b3d_A YTBE protein, putative 99.8 1.5E-20 5.2E-25 140.5 5.1 94 1-128 164-257 (314)
34 4exb_A Putative uncharacterize 99.8 1.7E-20 5.8E-25 139.0 5.2 74 1-84 175-248 (292)
35 3ln3_A Dihydrodiol dehydrogena 99.8 3E-20 1E-24 139.2 5.9 105 1-128 152-258 (324)
36 1mi3_A Xylose reductase, XR; a 99.8 7.8E-20 2.7E-24 136.9 6.8 107 1-128 154-261 (322)
37 3h7r_A Aldo-keto reductase; st 99.8 1.5E-19 5E-24 136.0 8.3 101 1-128 159-259 (331)
38 2bgs_A Aldose reductase; holoe 99.8 1.3E-19 4.5E-24 137.0 7.0 96 1-128 175-270 (344)
39 3h7u_A Aldo-keto reductase; st 99.8 1.1E-19 3.8E-24 136.8 6.4 101 1-128 163-263 (335)
40 3o3r_A Aldo-keto reductase fam 99.8 2.2E-19 7.5E-24 134.1 7.6 105 1-128 145-250 (316)
41 3cf4_A Acetyl-COA decarboxylas 92.5 0.033 1.1E-06 46.3 0.9 38 37-79 313-351 (807)
42 2ay0_A Bifunctional PUTA prote 76.2 1.3 4.6E-05 24.2 1.7 29 100-128 9-37 (58)
43 2cpg_A REPA protein, transcrip 75.8 0.78 2.7E-05 23.3 0.6 29 100-128 8-36 (45)
44 2gpe_A Bifunctional protein PU 73.4 1.4 4.9E-05 23.2 1.3 29 100-128 9-37 (52)
45 2k9i_A Plasmid PRN1, complete 65.7 3 0.0001 21.9 1.6 30 99-128 14-43 (55)
46 2w6k_A COBE; biosynthetic prot 63.5 15 0.00051 23.8 4.9 55 17-73 21-76 (145)
47 3e96_A Dihydrodipicolinate syn 51.9 34 0.0012 24.9 5.7 64 8-73 80-145 (316)
48 3kws_A Putative sugar isomeras 51.4 13 0.00045 25.9 3.3 63 6-73 19-85 (287)
49 1baz_A ARC repressor; transcri 51.3 12 0.0004 19.9 2.4 30 99-128 12-41 (53)
50 3t7y_A YOP proteins translocat 50.9 15 0.00051 22.2 3.0 24 56-79 46-69 (97)
51 3eb2_A Putative dihydrodipicol 48.7 34 0.0012 24.6 5.2 70 8-77 72-143 (300)
52 3daq_A DHDPS, dihydrodipicolin 48.4 49 0.0017 23.7 6.0 70 8-77 70-141 (292)
53 3gd6_A Muconate cycloisomerase 48.2 28 0.00095 26.0 4.8 68 3-77 234-301 (391)
54 3qc0_A Sugar isomerase; TIM ba 48.2 7.3 0.00025 26.9 1.5 57 13-73 7-66 (275)
55 3m5v_A DHDPS, dihydrodipicolin 47.7 46 0.0016 23.9 5.8 67 11-77 80-147 (301)
56 2ehh_A DHDPS, dihydrodipicolin 47.6 49 0.0017 23.6 5.9 70 8-77 68-139 (294)
57 3dz1_A Dihydrodipicolinate syn 47.5 54 0.0018 23.7 6.2 69 8-77 75-147 (313)
58 2b9s_B DNA topoisomerase I-lik 47.3 6.4 0.00022 21.9 0.9 22 44-69 19-40 (62)
59 2vc6_A MOSA, dihydrodipicolina 47.3 48 0.0016 23.7 5.8 70 8-77 68-139 (292)
60 3c01_E Surface presentation of 46.9 19 0.00064 21.9 3.0 24 56-79 31-54 (98)
61 3flu_A DHDPS, dihydrodipicolin 46.9 50 0.0017 23.7 5.9 70 8-77 75-146 (297)
62 2k5j_A Uncharacterized protein 46.6 6.9 0.00023 22.7 1.0 30 99-128 14-43 (80)
63 1f6k_A N-acetylneuraminate lya 45.8 58 0.002 23.3 6.1 71 7-77 71-143 (293)
64 3cpr_A Dihydrodipicolinate syn 45.8 54 0.0019 23.6 5.9 70 8-77 84-155 (304)
65 2ekg_A Proline dehydrogenase/d 45.5 57 0.002 24.0 6.0 59 12-76 241-300 (327)
66 3si9_A DHDPS, dihydrodipicolin 45.3 53 0.0018 23.9 5.8 70 8-77 90-161 (315)
67 3tak_A DHDPS, dihydrodipicolin 44.8 52 0.0018 23.5 5.7 70 8-77 69-140 (291)
68 1xky_A Dihydrodipicolinate syn 44.6 50 0.0017 23.8 5.6 70 8-77 80-151 (301)
69 2yxg_A DHDPS, dihydrodipicolin 44.5 52 0.0018 23.5 5.6 71 7-77 67-139 (289)
70 3d0c_A Dihydrodipicolinate syn 44.1 59 0.002 23.5 5.9 64 7-72 79-144 (314)
71 3vni_A Xylose isomerase domain 43.9 26 0.0009 24.3 3.9 58 13-74 4-70 (294)
72 3qze_A DHDPS, dihydrodipicolin 43.6 61 0.0021 23.5 5.9 70 8-77 91-162 (314)
73 3na8_A Putative dihydrodipicol 43.5 52 0.0018 23.9 5.6 70 8-77 92-163 (315)
74 3lmz_A Putative sugar isomeras 43.3 28 0.00095 23.8 3.9 18 56-73 65-82 (257)
75 2wkj_A N-acetylneuraminate lya 42.9 65 0.0022 23.1 6.0 70 8-77 79-151 (303)
76 2nuw_A 2-keto-3-deoxygluconate 42.8 57 0.0019 23.3 5.6 67 11-77 68-136 (288)
77 1w3i_A EDA, 2-keto-3-deoxy glu 41.6 63 0.0022 23.1 5.7 67 11-77 68-136 (293)
78 2rfg_A Dihydrodipicolinate syn 41.3 55 0.0019 23.5 5.4 70 8-77 68-139 (297)
79 2r91_A 2-keto-3-deoxy-(6-phosp 41.3 61 0.0021 23.0 5.6 67 11-77 67-135 (286)
80 2hmc_A AGR_L_411P, dihydrodipi 40.7 64 0.0022 23.8 5.7 69 8-77 91-163 (344)
81 4h6q_A Proline dehydrogenase; 40.4 79 0.0027 23.1 6.1 60 11-76 225-285 (312)
82 2r8w_A AGR_C_1641P; APC7498, d 40.3 61 0.0021 23.7 5.5 70 8-77 102-173 (332)
83 4ggi_A UDP-2,3-diacylglucosami 40.2 46 0.0016 23.8 4.8 46 20-73 234-279 (283)
84 3bzy_B ESCU; auto cleavage pro 39.9 14 0.00049 21.6 1.7 24 56-79 31-54 (83)
85 1pq4_A Periplasmic binding pro 39.9 83 0.0028 22.4 6.1 53 16-76 219-271 (291)
86 3l21_A DHDPS, dihydrodipicolin 39.7 46 0.0016 24.0 4.7 70 8-77 83-154 (304)
87 2zvr_A Uncharacterized protein 39.0 69 0.0023 22.1 5.5 58 11-73 21-89 (290)
88 3vp6_A Glutamate decarboxylase 38.8 70 0.0024 24.5 5.9 69 10-79 219-292 (511)
89 3b4u_A Dihydrodipicolinate syn 38.3 90 0.0031 22.3 6.1 70 8-77 71-146 (294)
90 2v9d_A YAGE; dihydrodipicolini 37.2 66 0.0023 23.7 5.3 70 8-77 99-170 (343)
91 1o5k_A DHDPS, dihydrodipicolin 37.0 57 0.0019 23.5 4.8 66 8-77 80-151 (306)
92 2qul_A D-tagatose 3-epimerase; 36.8 35 0.0012 23.5 3.7 58 13-73 4-68 (290)
93 3ff4_A Uncharacterized protein 36.4 34 0.0012 21.3 3.1 44 19-70 67-110 (122)
94 2okt_A OSB synthetase, O-succi 36.3 52 0.0018 24.0 4.6 60 12-77 218-277 (342)
95 1wuf_A Hypothetical protein LI 34.7 67 0.0023 23.9 5.1 60 12-77 256-315 (393)
96 2ojp_A DHDPS, dihydrodipicolin 34.7 52 0.0018 23.5 4.3 66 8-77 69-140 (292)
97 3gi1_A LBP, laminin-binding pr 34.4 96 0.0033 22.0 5.7 53 17-77 211-263 (286)
98 3by5_A Cobalamin biosynthesis 33.9 74 0.0025 20.8 4.6 62 7-73 7-72 (155)
99 1vli_A Spore coat polysacchari 33.8 1.5E+02 0.0052 22.3 7.3 68 6-77 156-229 (385)
100 2vt1_B Surface presentation of 33.7 15 0.0005 22.1 1.0 25 55-79 30-54 (93)
101 2kel_A SVTR protein, uncharact 33.3 25 0.00087 18.8 1.9 30 99-128 18-47 (56)
102 3thd_A Beta-galactosidase; TIM 33.2 1.2E+02 0.0039 24.8 6.4 53 18-71 37-98 (654)
103 3aal_A Probable endonuclease 4 32.1 85 0.0029 21.9 5.1 60 11-74 6-76 (303)
104 2g0w_A LMO2234 protein; putati 31.9 33 0.0011 24.0 2.9 60 12-74 24-90 (296)
105 2q02_A Putative cytoplasmic pr 31.3 54 0.0019 22.2 3.9 56 13-72 9-71 (272)
106 1nla_A Transcriptional repress 31.0 37 0.0013 18.8 2.3 31 97-127 10-40 (64)
107 4h41_A Putative alpha-L-fucosi 30.8 1.3E+02 0.0046 22.2 6.0 52 17-70 50-118 (340)
108 3qld_A Mandelate racemase/muco 30.7 54 0.0018 24.5 4.0 60 11-76 243-302 (388)
109 3ik4_A Mandelate racemase/muco 30.6 55 0.0019 24.1 4.0 59 11-77 243-302 (365)
110 3piu_A 1-aminocyclopropane-1-c 30.4 1.6E+02 0.0054 21.5 6.5 65 18-82 173-241 (435)
111 3dx5_A Uncharacterized protein 30.2 28 0.00096 24.1 2.2 19 56-74 52-70 (286)
112 1wue_A Mandelate racemase/muco 30.1 60 0.002 24.1 4.1 60 12-77 256-315 (386)
113 3fkr_A L-2-keto-3-deoxyarabona 30.1 1.4E+02 0.0049 21.4 6.1 66 7-73 75-145 (309)
114 2pcq_A Putative dihydrodipicol 29.8 1.1E+02 0.0039 21.6 5.4 65 11-77 65-131 (283)
115 3dg3_A Muconate cycloisomerase 29.8 67 0.0023 23.6 4.3 57 12-76 240-297 (367)
116 3s5o_A 4-hydroxy-2-oxoglutarat 29.3 1.4E+02 0.0047 21.4 5.8 69 8-77 82-155 (307)
117 3h5d_A DHDPS, dihydrodipicolin 29.2 1.1E+02 0.0039 22.0 5.4 70 8-77 75-147 (311)
118 2p0o_A Hypothetical protein DU 28.7 78 0.0027 23.8 4.5 58 12-71 4-69 (372)
119 2ps2_A Putative mandelate race 28.7 65 0.0022 23.6 4.1 56 16-77 247-302 (371)
120 3i4k_A Muconate lactonizing en 28.5 85 0.0029 23.2 4.7 59 12-76 249-307 (383)
121 3fcp_A L-Ala-D/L-Glu epimerase 28.5 58 0.002 24.1 3.8 60 12-77 248-307 (381)
122 2jlj_A YSCU, YOP proteins tran 28.5 28 0.00097 22.6 1.8 24 56-79 84-107 (144)
123 3bzs_A ESCU; auto cleavage pro 28.4 29 0.00099 22.4 1.8 24 56-79 85-108 (137)
124 3q45_A Mandelate racemase/muco 28.1 68 0.0023 23.6 4.1 60 12-77 239-298 (368)
125 2nly_A BH1492 protein, diverge 28.1 1E+02 0.0035 21.6 4.8 55 16-71 78-134 (245)
126 1wa3_A 2-keto-3-deoxy-6-phosph 27.9 1E+02 0.0036 20.2 4.7 46 11-70 63-109 (205)
127 3kki_A CAI-1 autoinducer synth 27.8 1.7E+02 0.0059 21.0 6.8 61 13-77 168-228 (409)
128 3dgb_A Muconate cycloisomerase 27.8 67 0.0023 23.8 4.0 60 12-77 249-308 (382)
129 1m0d_A Endonuclease, endodeoxy 27.3 1.3E+02 0.0043 19.4 5.9 51 18-69 59-110 (138)
130 3qoq_A Alginate and motility r 27.2 27 0.00091 19.8 1.3 31 97-127 22-52 (69)
131 3p6l_A Sugar phosphate isomera 27.2 1.2E+02 0.0042 20.4 5.1 52 19-73 61-112 (262)
132 3u9i_A Mandelate racemase/muco 27.2 56 0.0019 24.4 3.5 59 11-77 273-332 (393)
133 2jli_A YSCU, YOP proteins tran 26.9 32 0.0011 21.7 1.8 24 56-79 75-98 (123)
134 1chr_A Chloromuconate cycloiso 26.8 78 0.0027 23.3 4.2 60 12-77 243-302 (370)
135 1js3_A DDC;, DOPA decarboxylas 26.8 1.6E+02 0.0056 21.9 6.1 61 18-79 217-279 (486)
136 3a5f_A Dihydrodipicolinate syn 26.6 50 0.0017 23.6 3.0 66 8-77 69-140 (291)
137 3ess_A Cholix toxin; ADP-ribos 26.6 77 0.0026 21.4 3.6 22 13-34 29-50 (230)
138 1v77_A PH1877P, hypothetical p 26.2 57 0.0019 22.1 3.1 13 57-69 152-164 (212)
139 2prs_A High-affinity zinc upta 26.0 1.2E+02 0.004 21.4 4.9 52 17-76 206-257 (284)
140 1nu5_A Chloromuconate cycloiso 25.8 63 0.0022 23.6 3.5 57 15-77 246-302 (370)
141 1jvr_A HTLV-II MA, MA, human T 25.6 41 0.0014 21.2 2.0 33 14-49 38-70 (137)
142 1tkk_A Similar to chloromucona 25.3 77 0.0026 23.1 3.9 57 14-76 244-300 (366)
143 3jva_A Dipeptide epimerase; en 25.2 79 0.0027 23.1 4.0 60 12-77 238-298 (354)
144 2p8b_A Mandelate racemase/muco 25.2 79 0.0027 23.1 4.0 54 16-75 245-298 (369)
145 3u7v_A Beta-galactosidase; str 25.1 92 0.0031 24.8 4.4 61 10-71 58-128 (552)
146 4fc5_A TON_0340, putative unch 25.1 27 0.00091 25.2 1.3 41 12-65 192-232 (270)
147 3i6e_A Muconate cycloisomerase 24.6 81 0.0028 23.4 4.0 60 12-77 247-306 (385)
148 2lju_A Putative oxidoreductase 24.4 1.3E+02 0.0044 18.5 4.2 29 56-84 71-99 (108)
149 3qfe_A Putative dihydrodipicol 24.2 1.8E+02 0.0063 20.9 5.7 65 8-73 79-147 (318)
150 1kko_A 3-methylaspartate ammon 24.2 1.1E+02 0.0038 23.0 4.7 60 12-77 305-365 (413)
151 3kgw_A Alanine-glyoxylate amin 24.1 1.4E+02 0.0047 21.1 5.1 59 9-71 123-184 (393)
152 3s5s_A Mandelate racemase/muco 24.1 59 0.002 24.3 3.1 59 11-77 244-303 (389)
153 2g0t_A Conserved hypothetical 24.0 2.2E+02 0.0074 21.1 6.1 63 3-71 84-150 (350)
154 3nnk_A Ureidoglycine-glyoxylat 24.0 1.4E+02 0.0049 21.3 5.2 61 9-73 113-176 (411)
155 3my9_A Muconate cycloisomerase 23.5 80 0.0027 23.3 3.7 59 12-76 246-304 (377)
156 4e8g_A Enolase, mandelate race 23.4 67 0.0023 24.0 3.3 60 12-77 262-321 (391)
157 4f9i_A Proline dehydrogenase/d 23.4 2.4E+02 0.0081 24.2 6.9 69 2-76 364-433 (1026)
158 1yx1_A Hypothetical protein PA 23.3 45 0.0015 22.8 2.2 18 56-73 55-72 (264)
159 4h62_V Mediator of RNA polymer 23.2 65 0.0022 14.6 2.0 17 14-30 5-21 (31)
160 3no3_A Glycerophosphodiester p 22.5 1E+02 0.0035 21.1 3.9 67 4-73 124-204 (238)
161 3r0u_A Enzyme of enolase super 21.9 78 0.0027 23.5 3.4 60 12-77 243-302 (379)
162 2chr_A Chloromuconate cycloiso 21.8 67 0.0023 23.5 3.0 69 3-77 233-302 (370)
163 1x7f_A Outer surface protein; 21.8 84 0.0029 23.8 3.5 59 11-71 27-93 (385)
164 1dd4_C 50S ribosomal protein L 21.7 85 0.0029 15.6 2.5 20 104-123 17-36 (40)
165 1mnt_A MNT repressor; transcri 21.7 46 0.0016 19.0 1.7 29 99-127 9-37 (76)
166 4e8d_A Glycosyl hydrolase, fam 21.7 2.6E+02 0.009 22.4 6.5 57 17-74 28-94 (595)
167 1r0m_A N-acylamino acid racema 21.6 1.3E+02 0.0046 21.9 4.7 55 13-73 244-298 (375)
168 1ta3_B Endo-1,4-beta-xylanase; 21.5 1.1E+02 0.0037 22.0 4.0 71 2-74 191-271 (303)
169 2qde_A Mandelate racemase/muco 21.4 1E+02 0.0034 22.9 3.9 56 14-75 246-301 (397)
170 2rdx_A Mandelate racemase/muco 21.4 1.4E+02 0.0048 21.9 4.7 53 16-74 245-297 (379)
171 3isl_A Purine catabolism prote 20.9 1.5E+02 0.005 21.2 4.7 61 9-73 111-174 (416)
172 3d3a_A Beta-galactosidase; pro 20.8 91 0.0031 25.0 3.7 53 19-72 35-96 (612)
173 3jug_A Beta-mannanase; TIM-bar 20.6 1.4E+02 0.0049 21.8 4.6 56 19-77 220-277 (345)
174 3eez_A Putative mandelate race 20.1 97 0.0033 22.9 3.6 59 13-77 242-300 (378)
No 1
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=99.94 E-value=2.3e-26 Score=174.04 Aligned_cols=118 Identities=20% Similarity=0.221 Sum_probs=97.1
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+. .+|+++|++||++++.. +.+++++|+++||++++||||++|+|+
T Consensus 161 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~------~~~~~~Q~~~nl~~~~~-e~~l~~~~~~~gi~v~a~spL~~G~Lt 233 (348)
T 3n2t_A 161 LQKLHQDGKIRALGVSNFSPEQMDIFREV------APLATIQPPLNLFERTI-EKDILPYAEKHNAVVLAYGALCRGLLT 233 (348)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHH------SCCCEEECBCBTTBCGG-GGTHHHHHHHHTCEEEEBCTTGGGGGG
T ss_pred HHHHHHhCcceEEecCCCCHHHHHHHHHh------CCccEEEeeecCccCch-HHHHHHHHHHcCCeEEEeecccCcccc
Confidence 57899999999999999999999999987 37999999999999986 778999999999999999999999999
Q ss_pred CCccCCCCCCCCCccccccccCH-------HHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNA-------AVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+|.....+...+.+...+.+.+ +.++.++++|+++++++ +|+||
T Consensus 234 g~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~---aqvaL 285 (348)
T 3n2t_A 234 GKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSV---MAFAV 285 (348)
T ss_dssp TCCCTTCCCCTTSGGGGCGGGSTTHHHHHHHHHHHHHHHHHHTTCCH---HHHHH
T ss_pred CCccCCCCCCCcchhhcccccchhhHHHHHHHHHHHHHHHHHhCCCH---HHHHH
Confidence 99987544444444433333322 45678899999999875 55554
No 2
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=99.94 E-value=1.6e-26 Score=173.30 Aligned_cols=124 Identities=49% Similarity=0.878 Sum_probs=100.4
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||+++++.++.+++..+++.+|+++|++||+++++..+.+++++|+++||++++||||++|+|+
T Consensus 139 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Lt 218 (327)
T 3eau_A 139 MTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVS 218 (327)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGG
T ss_pred HHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceec
Confidence 57899999999999999999999999999988888899999999999999865667999999999999999999999999
Q ss_pred CCccCCCCCCCCCcccc-----cccc-------CHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKL-----VPKL-------NAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~-----~~~~-------~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+|.. ..|.+.+.... .+++ ..+.++.++++|+++++++ +|+||
T Consensus 219 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~---aqvaL 274 (327)
T 3eau_A 219 GKYDS-GIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTL---PQLAI 274 (327)
T ss_dssp TTTTT-SCCTTSGGGSTTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCH---HHHHH
T ss_pred CcccC-CCCCCcccccccccccccccccchhHHHHHHHHHHHHHHHHhCcCH---HHHHH
Confidence 99987 33443322110 0111 1235688899999999875 55555
No 3
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=99.94 E-value=2.3e-26 Score=173.51 Aligned_cols=124 Identities=17% Similarity=0.248 Sum_probs=99.8
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||||||++++++++.++++..++.+|+++|++||++++.. +.+++++|+++||++++||||++|+|+
T Consensus 164 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spL~~G~L~ 242 (346)
T 1lqa_A 164 LAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSF-EVGLAEVSQYEGVELLAYSCLGFGTLT 242 (346)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTH-HHHHHHHHHHHCCEEEEECTTGGGGGG
T ss_pred HHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchh-HHHHHHHHHHcCCeEEEecchhhhhhc
Confidence 5789999999999999999999999999988878778999999999999985 678999999999999999999999999
Q ss_pred CCccCCCCCCCCCcc---ccccccC---HHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSS---KLVPKLN---AAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~---~~~~~~~---~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+|.....|.+.+.. .+..... .+.++.++++|+++++++ +|+||
T Consensus 243 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~---aqvaL 293 (346)
T 1lqa_A 243 GKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDP---AQMAL 293 (346)
T ss_dssp TTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCH---HHHHH
T ss_pred CccccccCCCcchhhcchhhcccccHHHHHHHHHHHHHHHHHCcCH---HHHHH
Confidence 998763334333211 1111112 356778889999999875 55554
No 4
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=99.93 E-value=4.3e-26 Score=172.83 Aligned_cols=122 Identities=20% Similarity=0.348 Sum_probs=95.3
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||||||++++++++.++++..+ .+|+++|++||++++.. +.+++++|+++||++++||||++|+|+
T Consensus 174 L~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~-~~~~~~Q~~~~~~~~~~-e~~ll~~~~~~gI~v~a~spL~~G~Lt 251 (353)
T 3erp_A 174 LDHLVRHGKALYVGISNYPADLARQAIDILEDLG-TPCLIHQPKYSLFERWV-EDGLLALLQEKGVGSIAFSPLAGGQLT 251 (353)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHT-CCEEEEECBCBTTBCGG-GGTHHHHHHHHTCEEEEBSTTGGGTSS
T ss_pred HHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcC-CCeEEeeccccccccch-hhHHHHHHHHcCCeEEEeccccccccC
Confidence 5789999999999999999999999999988777 68999999999999985 778999999999999999999999999
Q ss_pred CCccCCCCCCCCCccc----ccc-ccC---HHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSK----LVP-KLN---AAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~----~~~-~~~---~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+|..+ .|.+.+... +.+ .+. .+.++.++++|+++++++ +|+||
T Consensus 252 g~~~~~-~p~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~---aqvaL 303 (353)
T 3erp_A 252 DRYLNG-IPEDSRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKL---SQMAL 303 (353)
T ss_dssp GGGTC--------------------CCHHHHHHHHHHHHHHHHTTCCH---HHHHH
T ss_pred CCccCC-CCCcccccccccccccccccHHHHHHHHHHHHHHHHhCCCH---HHHHH
Confidence 999873 444333211 111 122 256778899999999875 55554
No 5
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=99.93 E-value=5.3e-26 Score=173.10 Aligned_cols=124 Identities=50% Similarity=0.897 Sum_probs=100.0
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||+++++.++...+..+++.+|+++|++||+++++..+.+++++|+++||++++||||++|+|+
T Consensus 173 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Lt 252 (367)
T 3lut_A 173 MTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVS 252 (367)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGG
T ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEeccccccccc
Confidence 57899999999999999999999999999988888899999999999999865668999999999999999999999999
Q ss_pred CCccCCCCCCCCCccc--c--c-cc-cC------HHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSK--L--V-PK-LN------AAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~--~--~-~~-~~------~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+|.. ..|.+.+... + . ++ +. .+.++.++++|+++++++ +|+||
T Consensus 253 gk~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~---aqvaL 308 (367)
T 3lut_A 253 GKYDS-GIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTL---PQLAI 308 (367)
T ss_dssp TTTTT-SCCTTSGGGSTTCHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCH---HHHHH
T ss_pred CCcCC-CCCCcccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCH---HHHHH
Confidence 99986 3333322110 0 0 01 11 135678899999999875 55555
No 6
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=99.93 E-value=1e-25 Score=168.97 Aligned_cols=124 Identities=16% Similarity=0.217 Sum_probs=98.0
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+...|+.+|+++|++||++++.. +.+++++|+++||++++||||++|+|+
T Consensus 124 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~-e~~l~~~~~~~gi~v~a~spL~~G~Lt 202 (327)
T 1gve_A 124 CHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQV-ETELFPCLRHFGLRFYAFNPLAGGLLT 202 (327)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGG-GTTHHHHHHHHTCEEEEECTTGGGGGG
T ss_pred HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHcCCCCeEEEeccCcceeccc-HHHHHHHHHHcCCeEEEeccccccccc
Confidence 5789999999999999999999999999998889889999999999999986 678999999999999999999999999
Q ss_pred CCccCCCCC---CCCCccc------c----ccccCHHHHHHHHHHHhh----CCCCcchhhhccc
Q psy5380 81 GKIEEFTVP---VYPKSSK------L----VPKLNAAVMGEVERVLDN----KPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~---~~~~~~~------~----~~~~~~~~~~~l~~la~~----~~~~~~~la~~AL 128 (129)
|+|.....+ .++++.. + ...-..+.++.++++|++ +++++ +|+||
T Consensus 203 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~---aqvaL 264 (327)
T 1gve_A 203 GRYKYQDKDGKNPESRFFGNPFSQLYMDRYWKEEHFNGIALVEKALKTTYGPTAPSM---ISAAV 264 (327)
T ss_dssp TCCCGGGGGSCCCSSSSSSCTTHHHHHHHHCSHHHHHHHHHHHHHHHHHHCTTCCCH---HHHHH
T ss_pred CcccCCCccccCCCccccccccchhhhhcccChHHHHHHHHHHHHHHhhccccCCCH---HHHHH
Confidence 998653211 1112110 0 001112456788889998 88764 55555
No 7
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=99.93 E-value=7.8e-26 Score=170.87 Aligned_cols=123 Identities=22% Similarity=0.405 Sum_probs=93.4
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||||||++++++++.++++..+ .+++++|++||++++.+++.+++++|+++||++++||||++|+|+
T Consensus 153 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~-~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~ 231 (346)
T 3n6q_A 153 LAHAVQSGKALYVGISSYSPERTQKMVELLREWK-IPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLT 231 (346)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTT-CCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGG
T ss_pred HHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcC-CCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecC
Confidence 5789999999999999999999999999888776 478999999999999863338999999999999999999999999
Q ss_pred CCccCCCCCCCCCccc-------ccc-ccC---HHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSK-------LVP-KLN---AAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~-------~~~-~~~---~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+|.. +.|.+.+... +.+ .+. .+.++.++++|+++++++ +|+||
T Consensus 232 g~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~---aqvaL 286 (346)
T 3n6q_A 232 GKYLN-GIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSM---AQMAL 286 (346)
T ss_dssp TSCC------------------------CCHHHHHHHHHHHHHHHHTTCCH---HHHHH
T ss_pred CCccC-CCCCccccccccccccccchhhhhHHHHHHHHHHHHHHHHhCcCH---HHHHH
Confidence 99976 3333322110 111 122 246778899999999875 55554
No 8
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=99.93 E-value=6.6e-26 Score=169.09 Aligned_cols=118 Identities=17% Similarity=0.217 Sum_probs=95.0
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+. .+|+++|++||+++++. +.+++++|+++||++++||||++|+|+
T Consensus 140 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~------~~~~~~Q~~~~~~~~~~-e~~l~~~~~~~gi~v~a~spL~~G~L~ 212 (312)
T 1pyf_A 140 LNEMKKAGKIRSIGVSNFSLEQLKEANKD------GLVDVLQGEYNLLNREA-EKTFFPYTKEHNISFIPYFPLVSGLLA 212 (312)
T ss_dssp HHHHHHTTSBSCEEEESCCHHHHHHHTTT------SCCCEEEEECBTTBCGG-GTTHHHHHHHHTCEEEEESTTTTTGGG
T ss_pred HHHHHHCCCcCEEEecCCCHHHHHHHHhh------CCceEEeccCCccccch-HHHHHHHHHHcCCeEEEeccccccccc
Confidence 57899999999999999999999998864 57999999999999986 668999999999999999999999999
Q ss_pred CCccCCCCCCCCCccccccccCH-------HHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNA-------AVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+|.+...+...+.+...+.+.. +..+.++++|+++++++ +|+||
T Consensus 213 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~---aqvaL 264 (312)
T 1pyf_A 213 GKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDI---PHIVL 264 (312)
T ss_dssp TCCCTTCCCCTTCGGGGSGGGSHHHHHHHHHHHHTTHHHHHHTTSCH---HHHHH
T ss_pred CCCCCCCCCCCcccccccccccchhHHHHHHHHHHHHHHHHHcCCCH---HHHHH
Confidence 99876433223345544444432 34567888999998865 55554
No 9
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=99.93 E-value=1.2e-25 Score=169.16 Aligned_cols=118 Identities=17% Similarity=0.185 Sum_probs=94.0
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+. .+|+++|++||+++++. +.+++++|+++||++++||||++|+|+
T Consensus 140 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~------~~~~~~Q~~~nl~~~~~-e~~l~~~~~~~gi~v~a~spL~~G~Lt 212 (333)
T 1pz1_A 140 MKELYDAGKIRAIGVSNFSIEQMDTFRAV------APLHTIQPPYNLFEREM-EESVLPYAKDNKITTLLYGSLCRGLLT 212 (333)
T ss_dssp HHHHHHTTSBSCEEECSCCHHHHHHHHTT------SCCCEECCBCBTTBCGG-GGTHHHHHHHTTCEEEEBCTTGGGTTS
T ss_pred HHHHHHCCcCCEEEecCCCHHHHHHHHhc------CCcEEEeccccCccCch-HHHHHHHHHHcCceEEEeecccCCccC
Confidence 57899999999999999999999999875 57999999999999986 678999999999999999999999999
Q ss_pred CCccCCCCCCCCCcccccccc-------CHHHHHHHHHHHhhCCC-Ccchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKL-------NAAVMGEVERVLDNKPA-RPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~la~~~~~-~~~~la~~AL 128 (129)
|+|.+...+...+.+...+.+ ..++++.++++|+++++ ++ +|+||
T Consensus 213 g~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~~s~---aqvaL 265 (333)
T 1pz1_A 213 GKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSV---IHLAV 265 (333)
T ss_dssp SCCCTTCCCCTTCGGGSCGGGSTTTHHHHHHHHHHHHHHHHHHHSCCH---HHHHH
T ss_pred CCccccccCCCccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCH---HHHHH
Confidence 998764322222333222222 12567788899999887 64 55554
No 10
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=99.92 E-value=3.2e-25 Score=168.50 Aligned_cols=124 Identities=18% Similarity=0.231 Sum_probs=97.7
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+...|+.+|+++|++||+++++. +.+++++|+++||++++||||++|+|+
T Consensus 157 L~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~-e~~l~~~~~~~gi~v~a~spL~~G~Lt 235 (360)
T 2bp1_A 157 CQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQV-ETELFPCLRHFGLRFYAYNPLAGGLLT 235 (360)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGG-GTTHHHHHHHHTCEEEEECTTGGGGGG
T ss_pred HHHHHHCCCccEEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhccc-hhhHHHHHHHcCCeEEEecccccCccc
Confidence 5789999999999999999999999999998889889999999999999986 678999999999999999999999999
Q ss_pred CCccCCCCC---CCCCccc------c----ccccCHHHHHHHHHHHhh----CCCCcchhhhccc
Q psy5380 81 GKIEEFTVP---VYPKSSK------L----VPKLNAAVMGEVERVLDN----KPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~---~~~~~~~------~----~~~~~~~~~~~l~~la~~----~~~~~~~la~~AL 128 (129)
|+|.....+ .++++.. + ...-..+.++.+++++++ +++++ +|+||
T Consensus 236 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~---aqvaL 297 (360)
T 2bp1_A 236 GKYKYEDKDGKQPVGRFFGNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPSV---TSAAL 297 (360)
T ss_dssp TCCCGGGGTTTCCSBTTBSSTTHHHHHHHHCCHHHHHHHHHHHHHHHHHHGGGCCCH---HHHHH
T ss_pred CCccCcCcccccccccccccccchhhhhcccchhHHHHHHHHHHHHHHhhhhcCCCH---HHHHH
Confidence 998653211 1111110 0 001112356778888888 88764 55555
No 11
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=99.91 E-value=3.8e-25 Score=166.67 Aligned_cols=117 Identities=26% Similarity=0.374 Sum_probs=87.3
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+. .+++++|++||+++++. +.+++++|+++||++++||||++|+|+
T Consensus 141 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~------~~~~~~Q~~~~~~~~~~-e~~l~~~~~~~gi~v~a~spL~~G~L~ 213 (337)
T 3v0s_A 141 LXXLVEEGKIXYVGLSEASPDTIRRAHAV------HPVTALQIEYSLWTRDI-EDEIVPLCRQLGIGIVPYSPIGRGLFW 213 (337)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHH------SCCCEEEEECBTTBCGG-GTTHHHHHHHHTCEEEEESTTHHHHHH
T ss_pred HHHHHHCCCeeEEeccCCCHHHHHHHhcc------CCceEEEeeccccccch-hHHHHHHHHHcCceEEEeccccCcccC
Confidence 57899999999999999999999999876 57899999999999986 678999999999999999999999999
Q ss_pred CCccCCCCCCCCCccccccccC-------HHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLN-------AAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|++.....+. .+.+...+.+. .+.++.++++|+++++++ +|+||
T Consensus 214 g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~---aqvaL 264 (337)
T 3v0s_A 214 GKAIKESLPE-NSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTP---VQLAL 264 (337)
T ss_dssp HHHHHC--------------------------CHHHHHHHHHTTSCH---HHHHH
T ss_pred CCCCCCCCCC-cchhhcccccchhhhhhHHHHHHHHHHHHHHhCCCH---HHHHH
Confidence 9843322222 23332223222 245678999999999875 55554
No 12
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=99.88 E-value=4.1e-23 Score=154.54 Aligned_cols=109 Identities=19% Similarity=0.203 Sum_probs=85.8
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||||||++++++++.+. .+++++|++||++++.+ +. ++++|+++||++++||||++|+|+
T Consensus 154 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~------~~~~~~Q~~~nl~~~~~-e~-l~~~~~~~gI~v~a~spL~~G~L~ 225 (317)
T 1ynp_A 154 FEELKQEGVIRYYGISSIRPNVIKEYLKR------SNIVSIMMQYSILDRRP-EE-WFPLIQEHGVSVVVRGPVARGLLS 225 (317)
T ss_dssp HHHHHHHTSEEEEEEECCCHHHHHHHHHH------SCCCEEEEECBTTBCGG-GG-GHHHHHHTTCEEEEECTTGGGTTS
T ss_pred HHHHHhCCceEEEEecCCCHHHHHHHHhc------CCCEEEeccCCchhCCH-HH-HHHHHHHcCCeEEEecCccCcccC
Confidence 57899999999999999999999999876 46899999999999986 44 999999999999999999999999
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhcccC
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLALR 129 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL~ 129 (129)
|+ .++ + + ..+.......+.+.++++|+ ++ +++|+|||
T Consensus 226 ~~-~~~--~---~-~~~~~~~~~~~~~~l~~ia~--g~---s~aqvaL~ 262 (317)
T 1ynp_A 226 RR-PLP--E---G-EGYLNYRYDELKLLRESLPT--DR---PLHELALQ 262 (317)
T ss_dssp SS-CCC--T---T-CCBTTBCHHHHHHHHHHSCS--SS---CHHHHHHH
T ss_pred CC-CCc--c---c-cccccccHHHHHHHHHHHHc--CC---CHHHHHHH
Confidence 98 321 0 1 11122223456677888887 54 46676663
No 13
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=99.86 E-value=4e-22 Score=149.33 Aligned_cols=105 Identities=16% Similarity=0.134 Sum_probs=87.0
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||++++...+.+++++|+++||++++||||++|+|.
T Consensus 164 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~ 239 (319)
T 1ur3_M 164 FKHLHQSGKVRHFGVSNFTPAQFALLQSRLP----FTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF 239 (319)
T ss_dssp HHHHHHTTSBCCEEEESCCHHHHHHHHTTCS----SCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSS
T ss_pred HHHHHHCCCccEEEecCCCHHHHHHHHHhcC----CCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCcccc
Confidence 5789999999999999999999998887643 479999999999999865677999999999999999999999885
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+. +. .....+.++++|+++++++ ++|+||
T Consensus 240 ~~----------------~~-~~~~~~~l~~ia~~~g~t~--~aqvaL 268 (319)
T 1ur3_M 240 ND----------------DY-FQPLRDELAVVAEELNAGS--IEQVVN 268 (319)
T ss_dssp SC----------------GG-GHHHHHHHHHHHHHTTCSC--HHHHHH
T ss_pred CC----------------ch-hHHHHHHHHHHHHHcCCCh--HHHHHH
Confidence 31 01 2456788999999999875 144444
No 14
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=99.86 E-value=2.2e-22 Score=151.47 Aligned_cols=106 Identities=17% Similarity=0.267 Sum_probs=81.2
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|+|+
T Consensus 161 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~Q~~~~~~~~~---~~l~~~c~~~gI~v~ayspL~~G~L~ 233 (334)
T 3krb_A 161 MEQLVEEGLVKHIGVSNYTVPLLADLLNYAK----IKPLVNQIEIHPWHPN---DATVKFCLDNGIGVTAYSPMGGSYAD 233 (334)
T ss_dssp HHHHHHHTSEEEEEEESCCHHHHHHHHHHCS----SCCSEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTCCSBC-
T ss_pred HHHHHHcCCccEEEEecCCHHHHHHHHHhCC----CceEEeeeecCccccc---HHHHHHHHHcCCEEEEEecCCCCccc
Confidence 5789999999999999999999999998753 5899999999999886 47999999999999999999999999
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhh
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVS 124 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la 124 (129)
|++..+.. .+.. ...+.+.++|++++++++|+|
T Consensus 234 ~~~~~~~~---------~~~~--~~~~~l~~iA~~~g~s~aqva 266 (334)
T 3krb_A 234 PRDPSGTQ---------KNVI--LECKTLKAIADAKGTSPHCVA 266 (334)
T ss_dssp ------CC---------BCGG--GGCHHHHHHHHHHTSCHHHHH
T ss_pred CCCCCCCc---------ccch--hccHHHHHHHHHhCcCHHHhH
Confidence 98754210 0000 012578899999998754443
No 15
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=99.84 E-value=3e-21 Score=144.65 Aligned_cols=105 Identities=13% Similarity=0.174 Sum_probs=84.1
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCC--CceEecccccccccchhhccHHHHHHHhCCeeeeeccccccc
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCA--TPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMAL 78 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~--~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~ 78 (129)
|++|+++||||+||||||++++++++.+.+. . +|+++|++||++.++ .+++++|+++||++++||||++|+
T Consensus 151 le~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~p~~~Q~~~~~~~~~---~~l~~~~~~~gI~v~a~spL~~G~ 223 (323)
T 1afs_A 151 MEKCKDAGLAKSIGVSNFNCRQLERILNKPG----LKYKPVCNQVECHLYLNQ---SKMLDYCKSKDIILVSYCTLGSSR 223 (323)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHTCTT----CCSCCSEEEEECBTTBCC---HHHHHHHHHHTCEEEEESTTSCCC
T ss_pred HHHHHHcCCcCEEEeeCCCHHHHHHHHHhcC----cCCCCEEEeeccccccch---HHHHHHHHHcCCEEEEecCccCCc
Confidence 5789999999999999999999999987653 4 789999999999876 369999999999999999999999
Q ss_pred cCCCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 79 ISGKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 79 Ltgk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+| |.....| .. + ..+.++++|+++++++ +|+||
T Consensus 224 l~~-~~~~~~~---~~------~---~~~~l~~ia~~~g~s~---aqvaL 257 (323)
T 1afs_A 224 DKT-WVDQKSP---VL------L---DDPVLCAIAKKYKQTP---ALVAL 257 (323)
T ss_dssp CTT-TSCTTSC---CG------G---GCHHHHHHHHHTTCCH---HHHHH
T ss_pred ccc-ccccCCc---ch------h---cCHHHHHHHHHhCCCH---HHHHH
Confidence 987 5431110 00 1 1257889999998864 55555
No 16
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=99.84 E-value=2.1e-21 Score=145.22 Aligned_cols=112 Identities=13% Similarity=0.149 Sum_probs=85.2
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||||||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|.|+
T Consensus 138 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~Q~~~~~~~~~---~~l~~~~~~~gI~v~a~spL~~G~l~ 210 (317)
T 1qwk_A 138 FDAVYKAGLAKAVGVSNWNNDQISRALALGL----TPVHNSQVELHLYFPQ---HDHVDFCKKHNISVTSYATLGSPGRV 210 (317)
T ss_dssp HHHHHHTTSBSSEEEESCCHHHHHHHHTTCS----SCCCEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTCSCCEE
T ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHhcC----CccceecceeccccCc---HHHHHHHHHcCCEEEEecCccCCCcc
Confidence 5789999999999999999999999987643 5789999999999886 36999999999999999999999887
Q ss_pred CCccCCC-CCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFT-VPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+|.... .+. +.+. .+.+ ...+.++++|+++++++ +|+||
T Consensus 211 -~~~~~~~~~~--~~~~-~~~~--~~~~~l~~ia~~~g~s~---aqvaL 250 (317)
T 1qwk_A 211 -NFTLPTGQKL--DWAP-APSD--LQDQNVLALAEKTHKTP---AQVLL 250 (317)
T ss_dssp -CCBCTTCCBC--CCEE-CSSG--GGCHHHHHHHHHHTCCH---HHHHH
T ss_pred -cccccccccc--cccc-cchh--hccHHHHHHHHHHCcCH---HHHHH
Confidence 565421 111 1111 1111 01357889999998864 55555
No 17
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=99.84 E-value=3.9e-21 Score=144.19 Aligned_cols=105 Identities=13% Similarity=0.179 Sum_probs=83.4
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCC--ceEecccccccccchhhccHHHHHHHhCCeeeeeccccccc
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCAT--PIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMAL 78 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~--~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~ 78 (129)
|++|+++||||+||||||++++++++.+.+. .+ |+++|++||++.++ .+++++|+++||++++||||++|+
T Consensus 154 le~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~p~~~Q~~~~~~~~~---~~l~~~~~~~gI~v~a~spL~~G~ 226 (326)
T 3buv_A 154 MEACKDAGLVKSLGVSNFNRRQLELILNKPG----LKHKPVSNQVECHPYFTQ---PKLLKFCQQHDIVITAYSPLGTSR 226 (326)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHTCTT----CCSCCCEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTCCCC
T ss_pred HHHHHHcCCccEEEEeCCCHHHHHHHHHhCC----CCCCCeeeeeecccccCc---HHHHHHHHHcCCEEEEeccccCCc
Confidence 5789999999999999999999999987653 45 89999999999876 369999999999999999999999
Q ss_pred cCCCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 79 ISGKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 79 Ltgk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+ +|... ..... + ..+.+.++|+++++++ +|+||
T Consensus 227 l~-~~~~~---~~~~~------~---~~~~l~~ia~~~g~s~---aqvaL 260 (326)
T 3buv_A 227 NP-IWVNV---SSPPL------L---KDALLNSLGKRYNKTA---AQIVL 260 (326)
T ss_dssp CT-TTSCT---TSCCG------G---GCHHHHHHHHHHTCCH---HHHHH
T ss_pred cc-ccccc---CCccc------c---ccHHHHHHHHHhCCCH---HHHHH
Confidence 98 55431 11010 1 1257889999998865 55554
No 18
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=99.84 E-value=3.7e-21 Score=144.61 Aligned_cols=105 Identities=15% Similarity=0.209 Sum_probs=83.8
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCC--CceEecccccccccchhhccHHHHHHHhCCeeeeeccccccc
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCA--TPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMAL 78 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~--~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~ 78 (129)
|++|+++||||+||||||++++++++.+.+. . +|+++|++||++.++ .+++++|+++||++++||||++|.
T Consensus 151 le~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~p~v~Q~~~~~~~~~---~~l~~~~~~~gI~v~a~spL~~G~ 223 (331)
T 1s1p_A 151 MEKCKDAGLAKSIGVSNFNRRQLEMILNKPG----LKYKPVCNQVECHPYFNR---SKLLDFCKSKDIVLVAYSALGSQR 223 (331)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHTCTT----CCCCCSEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTSCCC
T ss_pred HHHHHHcCCccEEEEeCCCHHHHHHHHHhcC----ccCCCceeeeecCCCcCh---HHHHHHHHHcCCEEEEeccccCCc
Confidence 5789999999999999999999999987654 3 789999999999876 369999999999999999999999
Q ss_pred cCCCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 79 ISGKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 79 Ltgk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|+| |.. +..... +. .+.++++|+++++++ +|+||
T Consensus 224 l~~-~~~---~~~~~~------~~---~~~l~~ia~~~g~s~---aqvaL 257 (331)
T 1s1p_A 224 DKR-WVD---PNSPVL------LE---DPVLCALAKKHKRTP---ALIAL 257 (331)
T ss_dssp CTT-TSC---TTSCCG------GG---CHHHHHHHHHHTSCH---HHHHH
T ss_pred ccc-ccc---CCCccc------cc---CHHHHHHHHHhCCCH---HHHHH
Confidence 987 433 111010 11 257889999998764 55555
No 19
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=99.84 E-value=5.2e-21 Score=140.68 Aligned_cols=92 Identities=16% Similarity=0.312 Sum_probs=78.5
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|.|.
T Consensus 126 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~Q~~~~~~~~~---~~l~~~~~~~gi~v~a~spl~~G~l~ 198 (276)
T 3f7j_A 126 LEKLYKDGKIRAIGVSNFQVHHLEELLKDAE----IKPMVNQVEFHPRLTQ---KELRDYCKGQGIQLEAWSPLMQGQLL 198 (276)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHCS----SCCSEEEEECBTTBCC---HHHHHHHHHHTCEEEEESTTGGGTTT
T ss_pred HHHHHHcCCccEEEeccCCHHHHHHHHHhcC----CCceeeeeeeccccCC---HHHHHHHHHCCCEEEEecCCCCCccC
Confidence 5789999999999999999999999987653 5789999999999876 47899999999999999999999765
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchh
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMV 123 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~l 123 (129)
+. +.++++|++++++++|+
T Consensus 199 ~~------------------------~~l~~ia~~~g~t~aqv 217 (276)
T 3f7j_A 199 DN------------------------EVLTQIAEKHNKSVAQV 217 (276)
T ss_dssp TC------------------------HHHHHHHHHHTCCHHHH
T ss_pred CC------------------------HHHHHHHHHhCCCHHHH
Confidence 31 26788899988775443
No 20
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=99.83 E-value=7.9e-21 Score=141.88 Aligned_cols=94 Identities=16% Similarity=0.317 Sum_probs=80.0
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|.|.
T Consensus 160 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~p~~~Q~~~~~~~~~---~~l~~~~~~~gi~v~a~spL~~G~l~ 232 (310)
T 3b3e_A 160 LEKLYKDGKIRAIGVSNFQVHHLEELLKDAE----IKPMVNQVEFHPRLTQ---KELRDYCKGQGIQLEAWSPLMQGQLL 232 (310)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHCS----SCCSEEEEECBTTBCC---HHHHHHHHHHTCEEEEESTTGGGTTT
T ss_pred HHHHHHcCCcceEeecCCCHHHHHHHHHhcC----CCcceeeeeccCccCC---HHHHHHHHHcCCEEEEeccccCCCcC
Confidence 5789999999999999999999999988753 5789999999999876 47999999999999999999999765
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+. +.++++|+++++++ +|+||
T Consensus 233 ~~------------------------~~l~~iA~~~g~t~---aqvaL 253 (310)
T 3b3e_A 233 DN------------------------EVLTQIAEKHNKSV---AQVIL 253 (310)
T ss_dssp TC------------------------HHHHHHHHHHTCCH---HHHHH
T ss_pred CC------------------------HHHHHHHHHhCCCH---HHHHH
Confidence 31 26788899988765 45544
No 21
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=99.83 E-value=9.9e-21 Score=139.74 Aligned_cols=94 Identities=15% Similarity=0.271 Sum_probs=78.6
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|.|.
T Consensus 147 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~p~~~Q~~~~~~~~~---~~l~~~~~~~gi~v~a~spL~~G~l~ 219 (283)
T 3o0k_A 147 FIKLKEEGRVKSIGVSNFRTADLERLIKESG----VTPVLNQIELHPQFQQ---DELRLFHGKHDIATEAWSPLGQGKLL 219 (283)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHS----CCCSEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTCCC-CT
T ss_pred HHHHHHCCCcceEEeccCcHHHHHHHHHhCC----CCeEEEEeecCcccCc---HHHHHHHHHCCcEEEEecCCCCCccc
Confidence 5789999999999999999999999987653 5788999999999975 36999999999999999999999764
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
.. +.+.++|+++++++ +|+||
T Consensus 220 ~~------------------------~~l~~ia~~~g~t~---aqvaL 240 (283)
T 3o0k_A 220 ED------------------------PTLKSIAEKHAKSV---AQIIL 240 (283)
T ss_dssp TC------------------------HHHHHHHHHHTSCH---HHHHH
T ss_pred cc------------------------hHHHHHHHHhCCCH---HHHHH
Confidence 21 26888899888765 55554
No 22
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=99.83 E-value=3.8e-21 Score=142.14 Aligned_cols=94 Identities=14% Similarity=0.270 Sum_probs=77.8
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++. +++++|+++||++++||||++|.|.
T Consensus 138 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~Q~~~~~~~~~~---~l~~~~~~~gi~v~a~spl~~G~l~ 210 (288)
T 4f40_A 138 FEQLYKEKKVRAIGVSNFHIHHLEDVLAMCT----VTPMVNQVELHPLNNQA---DLRAFCDAKQIKVEAWSPLGQGKLL 210 (288)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHTTCS----SCCCEEEEECBTTBCCH---HHHHHHHHTTCEEEEESTTC--CGG
T ss_pred HHHHHHcCCccEEEeccCCHHHHHHHHHhCC----CCCeEEeccCccccCCH---HHHHHHHHCCCEEEEecCCCCCccc
Confidence 5789999999999999999999999987653 57899999999999873 6899999999999999999999876
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+. +.+.++|+++++++ +|+||
T Consensus 211 ~~------------------------~~l~~ia~~~g~t~---aqvaL 231 (288)
T 4f40_A 211 SN------------------------PILSAIGAKYNKTA---AQVIL 231 (288)
T ss_dssp GC------------------------HHHHHHHHHHTCCH---HHHHH
T ss_pred cc------------------------HHHHHHHHHhCCCH---HHHHH
Confidence 41 15778888888765 55554
No 23
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=99.83 E-value=6e-21 Score=142.71 Aligned_cols=104 Identities=17% Similarity=0.225 Sum_probs=85.7
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++...+. ..+.++|++|++..++ .+++++|+++||++++||||++|.++
T Consensus 146 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~q~~~~~~~~~---~~l~~~~~~~gi~~~a~spL~~g~~~ 218 (324)
T 4gac_A 146 LEVLVAKGLVKALGLSNFNSRQIDDVLSVAS----VRPAVLQVECHPYLAQ---NELIAHCHARGLEVTAYSPLGSSDRA 218 (324)
T ss_dssp HHHHHHTTSBSCEEEESCCHHHHHHHHHHCS----SCCCEEEEECBTTBCC---HHHHHHHHHHTCEEEEESTTCCGGGG
T ss_pred HHHHHHCCCeeEecCCCCCHHHHHHHHHhCC----CCcceeeeccCchhhH---HHHHHHHHHhceeeeecCCcccCccc
Confidence 5789999999999999999999999988764 6789999999998765 46999999999999999999999999
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+++..... + ...+.+.++|+++++++ +|+||
T Consensus 219 ~~~~~~~~------------~--~~~~~l~~iA~~~g~t~---aqvaL 249 (324)
T 4gac_A 219 WRHPDEPV------------L--LEEPVVLALAEKHGRSP---AQILL 249 (324)
T ss_dssp GGSTTSCC------------G--GGCHHHHHHHHHHTCCH---HHHHH
T ss_pred cCCCCCcc------------h--hhHHHHHHHHHHhCCCH---HHHHH
Confidence 98765211 0 01236788999999875 55554
No 24
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=99.82 E-value=1.2e-20 Score=139.26 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=78.5
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++. +++++|+++||++++||||++|.|.
T Consensus 132 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~p~~~Q~~~~~~~~~~---~l~~~~~~~gi~v~a~spl~~G~l~ 204 (283)
T 2wzm_A 132 LMKVKEDGIARSIGVCNFGAEDLETIVSLTY----FTPAVNQIELHPLLNQA---ALREVNAGYNIVTEAYGPLGVGRLL 204 (283)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHC----CCCSEEEEECBTTBCCH---HHHHHHHHTTCEEEEECTTTTTGGG
T ss_pred HHHHHHcCCccEEEEcCCCHHHHHHHHHhcC----CCcccccccCCcccCCH---HHHHHHHHCCCEEEEecCCCCCccc
Confidence 5789999999999999999999999998764 57899999999999873 5899999999999999999998431
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
. . +.+.++|++++.++ +|+||
T Consensus 205 ~--------------------~----~~l~~ia~~~g~s~---aqvaL 225 (283)
T 2wzm_A 205 D--------------------H----PAVTAIAEAHGRTA---AQVLL 225 (283)
T ss_dssp G--------------------C----HHHHHHHHHHTCCH---HHHHH
T ss_pred c--------------------h----HHHHHHHHHhCCCH---HHHHH
Confidence 1 0 26778888888764 55554
No 25
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=99.82 E-value=1.6e-20 Score=138.27 Aligned_cols=96 Identities=15% Similarity=0.157 Sum_probs=79.0
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|.
T Consensus 124 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~p~~~Q~~~~~~~~~---~~l~~~~~~~gi~v~a~spl~~G~-- 194 (278)
T 1hw6_A 124 MIELRAAGLTRSIGVSNHLVPHLERIVAATG----VVPAVNQIELHPAYQQ---REITDWAAAHDVKIESWGPLGQGK-- 194 (278)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHS----CCCSEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTGGGS--
T ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHhcC----CCceeEEEEeCcccCC---HHHHHHHHHcCCEEEEeccccCCC--
Confidence 5789999999999999999999999998764 5789999999999987 368999999999999999999994
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|++.. . +.+.++|+++++++ +|+||
T Consensus 195 ~~~~~----------------~----~~l~~ia~~~g~s~---aqvaL 219 (278)
T 1hw6_A 195 YDLFG----------------A----EPVTAAAAAHGKTP---AQAVL 219 (278)
T ss_dssp SCCTT----------------S----HHHHHHHHHHTCCH---HHHHH
T ss_pred ccccc----------------c----HHHHHHHHHhCCCH---HHHHH
Confidence 22111 1 26778888888764 55554
No 26
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=99.82 E-value=1.8e-20 Score=140.05 Aligned_cols=106 Identities=13% Similarity=0.225 Sum_probs=82.0
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||||||++++++++.+.+.- + .+|+++|++||++.++ .+++++|+++||++++||||++|.|+
T Consensus 145 le~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~-~-~~p~~~Q~~~~~~~~~---~~l~~~~~~~gI~v~a~spL~~G~l~ 219 (316)
T 1us0_A 145 MEELVDEGLVKAIGISNFNHLQVEMILNKPGL-K-YKPAVNQIECHPYLTQ---EKLIQYCQSKGIVVTAYSPLGSPDRP 219 (316)
T ss_dssp HHHHHHTTSBSCEEEESCCHHHHHHHHTCTTC-C-SCCSEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTCCTTCT
T ss_pred HHHHHHCCCccEEEEecCCHHHHHHHHHhCcc-c-CCceeeehhcCCccCC---HHHHHHHHHcCCEEEEecccccCccc
Confidence 57899999999999999999999999876541 1 1789999999999876 36999999999999999999999873
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|...+.| .. +. .+.+.++|+++++++ +|+||
T Consensus 220 --~~~~~~~---~~------~~---~~~l~~ia~~~g~s~---aqvaL 250 (316)
T 1us0_A 220 --WAKPEDP---SL------LE---DPRIKAIAAKHNKTT---AQVLI 250 (316)
T ss_dssp --TCCTTSC---CT------TT---CHHHHHHHHHHTCCH---HHHHH
T ss_pred --cccCCCc---cc------cc---CHHHHHHHHHhCCCH---HHHHH
Confidence 4321110 00 11 247889999998764 55555
No 27
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=99.82 E-value=1.4e-20 Score=138.80 Aligned_cols=94 Identities=18% Similarity=0.350 Sum_probs=77.6
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++. +++++|+++||++++||||++|.+-
T Consensus 129 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~p~~~Q~~~~~~~~~~---~l~~~~~~~gi~v~a~spL~~G~~~ 201 (281)
T 1vbj_A 129 FEKLYADKKVRAIGVSNFHEHHIEELLKHCK----VAPMVNQIELHPLLNQK---ALCEYCKSKNIAVTAWSPLGQGHLV 201 (281)
T ss_dssp HHHHHHTTSBSCEEEESCCHHHHHHHHTSCS----SCCSEEEEECBTTBCCH---HHHHHHHHTTCEEEEESTTGGGTTT
T ss_pred HHHHHHCCCccEEEeeCCCHHHHHHHHHhCC----CCceeeeEEeccccCCH---HHHHHHHHcCCEEEEecCCcCCCCC
Confidence 5789999999999999999999999887643 57899999999999863 6999999999999999999999421
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
. . +.+.++|+++++++ +|+||
T Consensus 202 ----~----------------~----~~l~~ia~~~g~s~---aqvaL 222 (281)
T 1vbj_A 202 ----E----------------D----ARLKAIGGKYGKTA---AQVML 222 (281)
T ss_dssp ----T----------------C----HHHHHHHHTTTCCH---HHHHH
T ss_pred ----C----------------C----HHHHHHHHHhCCCH---HHHHH
Confidence 0 0 26788888888764 55554
No 28
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=99.82 E-value=2.2e-20 Score=138.65 Aligned_cols=96 Identities=16% Similarity=0.286 Sum_probs=79.1
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++. +++++|+++||++++||||++|++.
T Consensus 144 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~p~v~Q~~~~~~~~~~---~l~~~~~~~gI~v~a~spL~~G~~~ 216 (296)
T 1mzr_A 144 MIELQKEGLIKSIGVCNFQIHHLQRLIDETG----VTPVINQIELHPLMQQR---QLHAWNATHKIQTESWSPLAQGGKG 216 (296)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHS----CCCSEEEEECBTTBCCH---HHHHHHHHTTCEEEEESTTTTTCTT
T ss_pred HHHHHHCCCcCEEEEeCCCHHHHHHHHHhcC----CCceEEeeecccccCCH---HHHHHHHHCCCeEEEeccccCCcch
Confidence 5789999999999999999999999998764 57899999999999863 6999999999999999999999641
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+.. . +.+.++|+++++++ +|+||
T Consensus 217 --~l~----------------~----~~l~~ia~~~g~s~---aqvaL 239 (296)
T 1mzr_A 217 --VFD----------------Q----KVIRDLADKYGKTP---AQIVI 239 (296)
T ss_dssp --TTT----------------S----HHHHHHHHHHTCCH---HHHHH
T ss_pred --hcC----------------h----HHHHHHHHHhCCCH---HHHHH
Confidence 000 1 26778898888764 55554
No 29
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=99.81 E-value=1.8e-20 Score=139.22 Aligned_cols=94 Identities=16% Similarity=0.247 Sum_probs=79.3
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|.|.
T Consensus 143 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~Q~~~~~~~~~---~~l~~~~~~~gi~v~a~spL~~G~l~ 215 (298)
T 3up8_A 143 LNEVRNAGKVRHIGISNFNTTQMEEAARLSD----APIATNQVEYHPYLDQ---TKVLQTARRLGMSLTSYYAMANGKVP 215 (298)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHCS----SCEEEEEEECBTTBCC---HHHHHHHHHHTCEEEEECTTGGGHHH
T ss_pred HHHHHHcCCccEEEEcCCCHHHHHHHHHhCC----CCceEEEEeccccccc---HHHHHHHHHCCCEEEEECCCcCCccc
Confidence 5789999999999999999999999988643 4799999999999885 47999999999999999999999764
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+. +.+.++|+++++++ +|+||
T Consensus 216 ~~------------------------~~l~~ia~~~g~s~---aqvaL 236 (298)
T 3up8_A 216 AD------------------------PLLTEIGGRHGKTA---AQVAL 236 (298)
T ss_dssp HC------------------------HHHHHHHHHHTCCH---HHHHH
T ss_pred cc------------------------chHHHHHHHcCCCH---HHHHH
Confidence 21 26788888888765 55544
No 30
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=99.81 E-value=2e-20 Score=138.47 Aligned_cols=97 Identities=16% Similarity=0.429 Sum_probs=79.7
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||+++++.++.+.+. ..++++|++++...+. .+++++|+++||++++||||++|.|+
T Consensus 133 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~q~~~~~~~~~---~~l~~~~~~~gi~~~a~spl~~G~l~ 205 (290)
T 4gie_A 133 LEKLYEEKKVRAIGVSNFEPHHLTELFKSCK----IRPMVNQVELHPLFQQ---RTLREFCKQHNIAITAWSPLGSGEEA 205 (290)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHTTCS----SCCSEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTCSSGGG
T ss_pred HHHHHHCCCcceeeecCCCHHHHHHHHHhcc----CCCceeeEeccccchh---HHHHHHHHHcCceEeeeccccccccc
Confidence 5789999999999999999999999887653 5677777777665554 57999999999999999999999998
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+++.. +.+.++|+++++++ +|+||
T Consensus 206 ~~~~~---------------------~~l~~iA~~~g~t~---aqvaL 229 (290)
T 4gie_A 206 GILKN---------------------HVLGEIAKKHNKSP---AQVVI 229 (290)
T ss_dssp CGGGC---------------------HHHHHHHHHHTCCH---HHHHH
T ss_pred ccchh---------------------HHHHHHHHHhCCCH---HHHHH
Confidence 86544 25788999998875 55555
No 31
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=99.81 E-value=2.6e-20 Score=138.44 Aligned_cols=96 Identities=20% Similarity=0.340 Sum_probs=78.7
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||||||++++++++.+.+. .+|+++|++||+++++. +++++|+++||++++||||++|+
T Consensus 137 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~p~v~Q~~~~~~~~~~---~l~~~~~~~gI~v~a~spL~~G~-- 207 (298)
T 1vp5_A 137 MEEMYKDGLVRAIGVSNFYPDRLMDLMVHHE----IVPAVNQIEIHPFYQRQ---EEIEFMRNYNIQPEAWGPFAEGR-- 207 (298)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHCS----SCCSEEEEECBTTBCCH---HHHHHHHHTTCEEEEESTTGGGG--
T ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHhCC----CCceEEEEecccccCCH---HHHHHHHHCCCEEEEecccccCC--
Confidence 5789999999999999999999999998753 57899999999999873 68999999999999999999995
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+++.. + +.++++|++++.++ +|+||
T Consensus 208 ~~~l~----------------~----~~l~~ia~~~g~s~---aqvaL 232 (298)
T 1vp5_A 208 KNIFQ----------------N----GVLRSIAEKYGKTV---AQVIL 232 (298)
T ss_dssp GGGGG----------------C----HHHHHHHHHHTCCH---HHHHH
T ss_pred ccccC----------------c----HHHHHHHHHhCCCH---HHHHH
Confidence 11111 1 26778888888764 55554
No 32
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=99.81 E-value=2.5e-20 Score=139.04 Aligned_cols=100 Identities=18% Similarity=0.303 Sum_probs=80.6
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||||||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|.+.
T Consensus 151 le~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~p~~~Q~~~~~~~~~---~~l~~~~~~~gi~v~a~spl~~G~~~ 223 (312)
T 1zgd_A 151 MEESLKLGLTKAIGVSNFSVKKLENLLSVAT----VLPAVNQVEMNLAWQQ---KKLREFCNAHGIVLTAFSPVRKGASR 223 (312)
T ss_dssp HHHHHHTTSBSCEEEESCCHHHHHHHHTTCS----SCCSEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTTTTTTT
T ss_pred HHHHHHcCCCCEEEEeCCCHHHHHHHHHhCC----CCceEEeeecCcccCC---HHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 5789999999999999999999999987643 5789999999999986 36899999999999999999998765
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
|. + . .+ . .+.+.++|+++++++ +|+||
T Consensus 224 ~~--~-~---------~~---~---~~~l~~ia~~~g~s~---aqvaL 250 (312)
T 1zgd_A 224 GP--N-E---------VM---E---NDMLKEIADAHGKSV---AQISL 250 (312)
T ss_dssp SS--C-T---------TT---T---CHHHHHHHHHHTSCH---HHHHH
T ss_pred CC--c-c---------cc---c---cHHHHHHHHHcCCCH---HHHHH
Confidence 41 0 0 00 1 147788999998765 55554
No 33
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=99.81 E-value=1.5e-20 Score=140.47 Aligned_cols=94 Identities=16% Similarity=0.259 Sum_probs=73.5
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. ..++++| |++..+.. +.+++++|+++||++++||||++|+|+
T Consensus 164 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----i~~~~nq--~~~~~~~~-~~~ll~~c~~~gI~v~a~sPL~~G~L~ 236 (314)
T 3b3d_A 164 LETLYKEGRIKAIGVSNFQIHHLEDLMTAAE----IKPMINQ--VEFHPRLT-QKELIRYCQNQGIQMEAWSPLMQGQLL 236 (314)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHTTTCS----SCCSEEE--EECBTTBC-CHHHHHHHHHHTCEEEEESTTGGGTTT
T ss_pred HHHHHHCCCEeEEEecCCchHHHHHHHHhcC----CCeEEEE--eccccccc-hHHHHHHHHHcCCEEEEeccccCCccc
Confidence 5789999999999999999999999887642 3455555 55555554 567999999999999999999999998
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+++ .+.++++++++++ +|+||
T Consensus 237 ~~~------------------------~~~~ia~~~g~t~---aqvaL 257 (314)
T 3b3d_A 237 DHP------------------------VLADIAQTYNKSV---AQIIL 257 (314)
T ss_dssp TCH------------------------HHHHHHHHTTCCH---HHHHH
T ss_pred Cch------------------------hhHHHHHHcCCCH---HHHHH
Confidence 752 3456788888764 55554
No 34
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=99.81 E-value=1.7e-20 Score=138.97 Aligned_cols=74 Identities=12% Similarity=0.036 Sum_probs=61.6
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+. |+++|++||+++++. .+++++|+++||++++||||++|+|+
T Consensus 175 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~--------~~~~Q~~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~L~ 244 (292)
T 4exb_A 175 LAALKREGLIGAYGLSGKTVEGGLRALRE--------GDCAMVTYNLNERAE--RPVIEYAAAHAKGILVKKALASGHAC 244 (292)
T ss_dssp HHHHHHTTSEEEEEEECSSHHHHHHHHHH--------SSEEEEECSSSCCTT--HHHHHHHHHTTCEEEEECCSCC----
T ss_pred HHHHHHCCCceEEEeCCCCHHHHHHHHHh--------hcEEeeccccccCCH--HHHHHHHHHCCcEEEEeccccCCccC
Confidence 57899999999999999999999988874 899999999999985 57999999999999999999999998
Q ss_pred CCcc
Q psy5380 81 GKIE 84 (129)
Q Consensus 81 gk~~ 84 (129)
+++.
T Consensus 245 ~~~g 248 (292)
T 4exb_A 245 LGAG 248 (292)
T ss_dssp ----
T ss_pred CCCC
Confidence 7643
No 35
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=99.80 E-value=3e-20 Score=139.20 Aligned_cols=105 Identities=13% Similarity=0.219 Sum_probs=80.7
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCC--ceEecccccccccchhhccHHHHHHHhCCeeeeeccccccc
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCAT--PIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMAL 78 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~--~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~ 78 (129)
|++|+++||||+||+|||++++++++.+.+. .+ |+++|++||++.++ .+++++|+++||++++||||++|.
T Consensus 152 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~p~~~Q~~~~~~~~~---~~l~~~~~~~gi~v~a~spL~~g~ 224 (324)
T 3ln3_A 152 LEECXDAGLVXSIGVSNFNHRQLERILNXPG----LXYXPVCNQVECHLYLNQ---RXLLDYCESXDIVLVAYGALGTQR 224 (324)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHTCTT----CCCCCSEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTSCCC
T ss_pred HHHHHhcCCeeEEEecCCcHHHHHHHHHhcC----ccCCceeeEeeeCcccch---HHHHHHHHHcCCEEEEecCCCCCC
Confidence 5789999999999999999999999887542 33 88999999999874 479999999999999999999998
Q ss_pred cCCCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 79 ISGKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 79 Ltgk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+.. +.....| .+ ...+.+.++|+++++++ +|+||
T Consensus 225 ~~~-~~~~~~~----------~~--~~~~~l~~ia~~~g~t~---aqvaL 258 (324)
T 3ln3_A 225 YXE-WVDQNSP----------VL--LNDPVLCDVAXXNXRSP---ALIAL 258 (324)
T ss_dssp CTT-TSCTTSC----------CG--GGCHHHHHHHHHHTSCH---HHHHH
T ss_pred ccc-ccccCCc----------ch--hcCHHHHHHHHhhCCCH---HHHHH
Confidence 642 2211111 00 01247889999998875 55555
No 36
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=99.79 E-value=7.8e-20 Score=136.86 Aligned_cols=107 Identities=16% Similarity=0.266 Sum_probs=80.7
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||++.++ .+++++|+++||++++||||++|.+.
T Consensus 154 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~Q~~~~~~~~~---~~l~~~~~~~gi~v~a~spL~~G~~~ 226 (322)
T 1mi3_A 154 LEKLVAAGKIKSIGVSNFPGALLLDLLRGAT----IKPAVLQVEHHPYLQQ---PKLIEFAQKAGVTITAYSSFGPQSFV 226 (322)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHCS----SCCCEEEEECBTTBCC---HHHHHHHHHTTCEEEEECTTTTHHHH
T ss_pred HHHHHHcCCcCEEEEcCCCHHHHHHHHHhCC----CCceEeecccCcCcCc---HHHHHHHHHcCCEEEEECCCCCCCcc
Confidence 5789999999999999999999999998754 5799999999999876 36999999999999999999999432
Q ss_pred CCccCCCCCCCCCccccccc-cCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPK-LNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
.. .. ..+.. .+. +. .+.++++|+++++++ +|+||
T Consensus 227 ~~-~~-~~~~~------~~~~~~---~~~l~~iA~~~g~t~---aqvaL 261 (322)
T 1mi3_A 227 EM-NQ-GRALN------TPTLFA---HDTIKAIAAKYNKTP---AEVLL 261 (322)
T ss_dssp TT-TC-HHHHT------SCCTTS---CHHHHHHHHHHTCCH---HHHHH
T ss_pred cc-cc-ccccc------Cccccc---CHHHHHHHHHcCCCH---HHHHH
Confidence 11 00 00000 000 11 257889999998875 55555
No 37
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=99.79 E-value=1.5e-19 Score=136.02 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=79.8
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|-..
T Consensus 159 L~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~Q~~~~~~~~~---~~l~~~~~~~gI~v~a~spL~~g~~~ 231 (331)
T 3h7r_A 159 MEALYDSGKARAIGVSNFSSKKLTDLLNVAR----VTPAVNQVECHPVWQQ---QGLHELCKSKGVHLSGYSPLGSQSKG 231 (331)
T ss_dssp HHHHHHTTSBSSEEEESCCHHHHHHHHHHCS----SCCSEEEEECBTTBCC---HHHHHHHHHHTCEEEEESTTSCSCTT
T ss_pred HHHHHHcCCCcEEEecCCCHHHHHHHHHhcC----CCceeEEeecccccCC---HHHHHHHHHCCCEEEEeCCCCCCCCC
Confidence 5789999999999999999999999988754 5799999999999886 37999999999999999999986210
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+.+ +. ....+.++++|+++++++ +|+||
T Consensus 232 --~~~-------------~~--~~~~~~l~~iA~~~g~t~---aqvaL 259 (331)
T 3h7r_A 232 --EVR-------------LK--VLQNPIVTEVAEKLGKTT---AQVAL 259 (331)
T ss_dssp --TTT-------------HH--HHTCHHHHHHHHHHTCCH---HHHHH
T ss_pred --CCc-------------cc--hhcCHHHHHHHHHHCcCH---HHHHH
Confidence 000 00 001257889999998875 55555
No 38
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=99.79 E-value=1.3e-19 Score=136.96 Aligned_cols=96 Identities=18% Similarity=0.309 Sum_probs=78.5
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||||||++++++++.+.+. .+|+++|++||++++. .+++++|+++||++++||||++|
T Consensus 175 Le~l~~~GkIr~iGvSn~~~~~l~~~~~~~~----i~p~v~Q~e~~~~~~~---~~ll~~~~~~gI~v~a~spL~~G--- 244 (344)
T 2bgs_A 175 MENLVKDGLVKDIGVCNYTVTKLNRLLRSAK----IPPAVCQMEMHPGWKN---DKIFEACKKHGIHITAYSPLGSS--- 244 (344)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHCS----SCCSEEEEECBTTBCC---HHHHHHHHHTTCEEEEESTTCTT---
T ss_pred HHHHHHcCCccEEEEecCCHHHHHHHHHhcC----CCceeeecccCcccCc---HHHHHHHHHCCCEEEEeCcccCC---
Confidence 5789999999999999999999999988754 5789999999999876 36999999999999999999998
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
| + .. + . .+.+.++|+++++++ +|+||
T Consensus 245 ~---~-~~---------~---~---~~~l~~iA~~~g~s~---aqvaL 270 (344)
T 2bgs_A 245 E---K-NL---------A---H---DPVVEKVANKLNKTP---GQVLI 270 (344)
T ss_dssp T---T-CC---------T---T---CHHHHHHHHHHTCCH---HHHHH
T ss_pred C---c-hh---------h---c---cHHHHHHHHHhCCCH---HHHHH
Confidence 2 1 00 0 0 136788999998764 55555
No 39
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=99.79 E-value=1.1e-19 Score=136.84 Aligned_cols=101 Identities=22% Similarity=0.276 Sum_probs=79.8
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccccccC
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALIS 80 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~Lt 80 (129)
|++|+++||||+||+|||++++++++.+.+. .+|+++|++||+++++ .+++++|+++||++++||||++|-+.
T Consensus 163 L~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~----~~~~~~Q~~~~~~~~~---~~l~~~~~~~gI~v~a~sPL~~g~~~ 235 (335)
T 3h7u_A 163 MEALYDSGKARAIGVSNFSTKKLADLLELAR----VPPAVNQVECHPSWRQ---TKLQEFCKSKGVHLSAYSPLGSPGTT 235 (335)
T ss_dssp HHHHHHTTSBSSEEEESCCHHHHHHHHHHCS----SCCSEEEEECBTTBCC---HHHHHHHHHHTCEEEEESTTCCTTCT
T ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHhCC----CCeEEEecccccccCC---HHHHHHHHHCCCEEEEeccCcCCCCC
Confidence 5789999999999999999999999988754 5789999999999986 36899999999999999999986321
Q ss_pred CCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 81 GKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 81 gk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
+... +. +. .+.++++|+++++++ +|+||
T Consensus 236 --~~~~------~~------~~---~~~l~~iA~~~g~t~---aqvaL 263 (335)
T 3h7u_A 236 --WLKS------DV------LK---NPILNMVAEKLGKSP---AQVAL 263 (335)
T ss_dssp --TSCC------CG------GG---CHHHHHHHHHHTCCH---HHHHH
T ss_pred --CCCc------cc------cc---cHHHHHHHHHHCcCH---HHHHH
Confidence 1110 00 00 147888999998875 55554
No 40
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=99.78 E-value=2.2e-19 Score=134.11 Aligned_cols=105 Identities=16% Similarity=0.316 Sum_probs=79.2
Q ss_pred ChHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCC-CCceEecccccccccchhhccHHHHHHHhCCeeeeecccccccc
Q psy5380 1 MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNC-ATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 1 l~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~-~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
|++|+++||||+||+|||++++++++.+.+ ++ .+|+++|++||++.++ .+++++|+++||++++||||++|..
T Consensus 145 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~---~~~~~p~~~Q~~~~~~~~~---~~l~~~~~~~gi~v~a~spL~~G~~ 218 (316)
T 3o3r_A 145 MEELVDQGLVKALGVSNFNHFQIERLLNKP---GLKHKPVTNQVECHPYLTQ---EKLIQYCHSKGIAVIAYSPLGSPDR 218 (316)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHTCT---TCCSCCCEEEEECBTTBCC---HHHHHHHHTTTCEEEEECTTCCTTC
T ss_pred HHHHHHcCCCcEEEEecCCHHHHHHHHHhC---CCCCCceEeeccCCcccch---HHHHHHHHHcCCEEEEecccCCCCC
Confidence 578999999999999999999999987643 21 2589999999999875 4799999999999999999999932
Q ss_pred CCCccCCCCCCCCCccccccccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 80 SGKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 80 tgk~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
.+.. +...+. +. .+.+.++|+++++++ +|+||
T Consensus 219 --~~~~---~~~~~~------~~---~~~l~~ia~~~g~t~---aqvaL 250 (316)
T 3o3r_A 219 --PYAK---PEDPVV------LE---IPKIKEIAAKHKKTI---AQVLI 250 (316)
T ss_dssp --TTCC---TTSCCS------TT---CHHHHHHHHHHTCCH---HHHHH
T ss_pred --cccc---ccchhh------hc---CHHHHHHHHHhCCCH---HHHHH
Confidence 1111 111010 01 147889999999875 55554
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=92.48 E-value=0.033 Score=46.28 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=30.5
Q ss_pred CceEecccccccccchhhccHHHHHHHhCCeeeeeccccc-ccc
Q psy5380 37 TPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM-ALI 79 (129)
Q Consensus 37 ~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~-G~L 79 (129)
.+.+++++||-.++ .+++.|.++|+++++.+|..+ |.+
T Consensus 313 a~dv~vV~~n~i~~-----~ll~~a~~~Gm~Vit~sp~~~~Grp 351 (807)
T 3cf4_A 313 MPDVIVVDEQCVRG-----DIVPEAQKLKIPVIASNPKIMYGLP 351 (807)
T ss_dssp CCSEEEECSSSCCT-----THHHHHHHTTCCEEECSTTCCTTCC
T ss_pred CCeEEEEEecCCCh-----HHHHHHHHCCCEEEEechhhhcCCC
Confidence 57888888887653 457899999999999999976 543
No 42
>2ay0_A Bifunctional PUTA protein; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.43.1.11
Probab=76.19 E-value=1.3 Score=24.22 Aligned_cols=29 Identities=14% Similarity=0.160 Sum_probs=25.0
Q ss_pred ccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 100 KLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 100 ~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
++++++.++++++|+..+.+...+..-||
T Consensus 9 rL~~el~~rL~~lA~~~~rs~s~lireAi 37 (58)
T 2ay0_A 9 MLDDATRERIKSAATRIDRTPHWLIKQAI 37 (58)
T ss_dssp EECHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 45789999999999999999888877665
No 43
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=75.78 E-value=0.78 Score=23.30 Aligned_cols=29 Identities=17% Similarity=0.297 Sum_probs=24.0
Q ss_pred ccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 100 KLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 100 ~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
.+++++.+.++++|+..|.+...+...||
T Consensus 8 ~l~~~l~~~Ld~~a~~~g~srS~~ir~ai 36 (45)
T 2cpg_A 8 TLSESVLENLEKMAREMGLSKSAMISVAL 36 (45)
T ss_dssp EEEHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 45789999999999999988777766665
No 44
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=73.41 E-value=1.4 Score=23.16 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=24.7
Q ss_pred ccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 100 KLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 100 ~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
++++++.+.++.+|+..+.+...+..-|+
T Consensus 9 rl~~~l~~~l~~lA~~~~rs~s~lir~Ai 37 (52)
T 2gpe_A 9 KLDDATRERIKSAATRIDRTPHWLIKQAI 37 (52)
T ss_dssp EEEHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 45789999999999999999888877665
No 45
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=65.72 E-value=3 Score=21.88 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=24.9
Q ss_pred cccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 99 PKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 99 ~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
-.+++++.+.++++|...|.+...+..-||
T Consensus 14 vrl~~el~~~l~~~a~~~g~s~s~~ir~ai 43 (55)
T 2k9i_A 14 VYIPQEWHDRLMEIAKEKNLTLSDVCRLAI 43 (55)
T ss_dssp EEECHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred EEcCHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 356889999999999999998777776665
No 46
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=63.45 E-value=15 Score=23.81 Aligned_cols=55 Identities=7% Similarity=-0.036 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHHHH-HhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 17 RWSPVEIMEAYSNC-RQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 17 n~~~~~~~~~~~~~-~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
+.+.+.+.++.+.+ ..+|+ .+..+-.--++ +....|..++++|+++|+.+..|++
T Consensus 21 g~~~~~i~~ai~~aL~~~~l-~~~~v~~lati-d~K~dE~gL~~~A~~lg~pl~~~~~ 76 (145)
T 2w6k_A 21 GCSAEHLRALLERTLGEHGR-SLAELDALASI-DGKRDEPGLRQLATLLERPVHFLAP 76 (145)
T ss_dssp TCCHHHHHHHHHHHHHHTTC-CGGGCCEEEEE-CSSSCCHHHHHHHHHHTSCEEEECH
T ss_pred CCCHHHHHHHHHHHHHHcCC-CHHHcceEech-HHhCCCHHHHHHHHHhCCCcEEeCH
Confidence 56788887777654 34442 33333333333 2222367899999999999999865
No 47
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=51.93 E-value=34 Score=24.86 Aligned_cols=64 Identities=6% Similarity=0.112 Sum_probs=38.6
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccc-cccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEY-HMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~-~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
|++ -.+|+++ +..+..+..+.+.+.|. .-+.+-.+| +..+++....-+...++..++.++.|.-
T Consensus 80 grvpViaGvg~-~t~~ai~la~~A~~~Ga-davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 80 GRALVVAGIGY-ATSTAIELGNAAKAAGA-DAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp TSSEEEEEECS-SHHHHHHHHHHHHHHTC-SEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred CCCcEEEEeCc-CHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 554 4568887 77777777777877774 444444444 3333221112234556677999999974
No 48
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=51.39 E-value=13 Score=25.88 Aligned_cols=63 Identities=6% Similarity=-0.096 Sum_probs=37.6
Q ss_pred HcCCc--cEEEecCCCHH--HHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 6 NQGWI--MYWGTSRWSPV--EIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 6 ~~G~i--r~iG~Sn~~~~--~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
..|+. ..+|++.++.. .+.+..+.+.+.| +..+++...-+... -.++.+.++++|+.+.+..+
T Consensus 19 ~~~~~m~mklg~~~~~~~~~~~~~~l~~~~~~G---~~~vEl~~~~~~~~--~~~~~~~l~~~gl~v~~~~~ 85 (287)
T 3kws_A 19 KTGKDLELKLSFQEGIAPGESLNEKLDFMEKLG---VVGFEPGGGGLAGR--VNEIKQALNGRNIKVSAICA 85 (287)
T ss_dssp ----CCCCEEEEETTSSCCSSHHHHHHHHHHTT---CCEEECBSTTCGGG--HHHHHHHHTTSSCEECEEEC
T ss_pred ccCCcceeeEEEEecccCCCCHHHHHHHHHHcC---CCEEEecCCchHHH--HHHHHHHHHHcCCeEEEEec
Confidence 34553 56888876553 3666777766655 46666655422322 24577888999998876544
No 49
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=51.26 E-value=12 Score=19.86 Aligned_cols=30 Identities=10% Similarity=0.028 Sum_probs=23.6
Q ss_pred cccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 99 PKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 99 ~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
-++++++.++++..|+..+.+..+....+|
T Consensus 12 lRlp~eL~~~l~~~A~~~grS~N~~i~~~L 41 (53)
T 1baz_A 12 LRWPREVLDLVRKVAEENGRSVNSEIYQRV 41 (53)
T ss_dssp EECCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 356889999999999999998666554443
No 50
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=50.91 E-value=15 Score=22.25 Aligned_cols=24 Identities=25% Similarity=0.325 Sum_probs=22.3
Q ss_pred cHHHHHHHhCCeeeeecccccccc
Q psy5380 56 YMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
.+.+.++++||.++-.-||++-+.
T Consensus 46 ~I~~~A~e~gVPi~e~~~LAr~L~ 69 (97)
T 3t7y_A 46 RIIAEAEKYGVPIMRNVPLAHQLL 69 (97)
T ss_dssp HHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHcCCeEEECHHHHHHHH
Confidence 478899999999999999999987
No 51
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=48.73 E-value=34 Score=24.65 Aligned_cols=70 Identities=9% Similarity=0.136 Sum_probs=42.9
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|...+.++-..|+..+++....-+...++..++.++.|. |-..|
T Consensus 72 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg 143 (300)
T 3eb2_A 72 RRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQR 143 (300)
T ss_dssp TSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCS
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccC
Confidence 553 45688877777777777778877853444444455554332212223445666799999996 65444
No 52
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=48.35 E-value=49 Score=23.66 Aligned_cols=70 Identities=7% Similarity=0.109 Sum_probs=42.3
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|...+.++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 70 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg 141 (292)
T 3daq_A 70 KRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTN 141 (292)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHS
T ss_pred CCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccC
Confidence 543 45689877777777777888877843344444445554332112223445666799999994 54334
No 53
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=48.18 E-value=28 Score=26.04 Aligned_cols=68 Identities=6% Similarity=-0.138 Sum_probs=43.8
Q ss_pred HHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 3 HAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 3 ~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
+++++-.|.- |-|-++.+++.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.+|
T Consensus 234 ~l~~~~~iPI-dE~~~~~~~~~~~~~~------~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 234 QLRLKTDYPI-SEHVWSFKQQQEMIKK------DAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHHCSSCE-EEECCCHHHHHHHHHH------TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHcCCCc-CCCCCCHHHHHHHHHc------CCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecCCCccH
Confidence 4455444544 8888999888888764 346777776655321001235678999999999876554443
No 54
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=48.16 E-value=7.3 Score=26.85 Aligned_cols=57 Identities=7% Similarity=-0.094 Sum_probs=33.7
Q ss_pred EEecCCCH---HHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 13 WGTSRWSP---VEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 13 iG~Sn~~~---~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
+|++.++. ..+.++.+.+.+.| +..+++....++... -.++.+.++++|+.+.+..|
T Consensus 7 lg~~~~~~~~~~~~~~~l~~~~~~G---~~~vEl~~~~~~~~~-~~~~~~~l~~~gl~~~~~~~ 66 (275)
T 3qc0_A 7 LSINLATIREQCGFAEAVDICLKHG---ITAIAPWRDQVAAIG-LGEAGRIVRANGLKLTGLCR 66 (275)
T ss_dssp EEEEGGGGTTTCCHHHHHHHHHHTT---CCEEECBHHHHHHHC-HHHHHHHHHHHTCEESCEEE
T ss_pred ceeeeeeccCCCCHHHHHHHHHHcC---CCEEEeccccccccC-HHHHHHHHHHcCCceEEeec
Confidence 56665544 34566666666655 566666443222211 23577788888988877765
No 55
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=47.75 E-value=46 Score=23.89 Aligned_cols=67 Identities=6% Similarity=0.043 Sum_probs=41.8
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
--+|++..+..+..+..+.+.+.|...+.++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 80 viaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 147 (301)
T 3m5v_A 80 VLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTG 147 (301)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhC
Confidence 46699888888888888888888854444454455544332112223445666799999995 44333
No 56
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=47.62 E-value=49 Score=23.64 Aligned_cols=70 Identities=10% Similarity=0.171 Sum_probs=42.9
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 68 grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 139 (294)
T 2ehh_A 68 GRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTC 139 (294)
T ss_dssp TSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 554 45799888888887777888887853344444445443332111223345666789999995 65445
No 57
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=47.49 E-value=54 Score=23.73 Aligned_cols=69 Identities=12% Similarity=0.111 Sum_probs=42.7
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhC--Ceeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIG--VGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~g--i~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.| ..-+.+-.+|+..+++....-+...++..+ +.++.|. |-..|
T Consensus 75 grvpViaGvg~~~t~~ai~la~~A~~~G-adavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg 147 (313)
T 3dz1_A 75 KSMQVIVGVSAPGFAAMRRLARLSMDAG-AAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLS 147 (313)
T ss_dssp TTSEEEEECCCSSHHHHHHHHHHHHHHT-CSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHC
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHHcC-CCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccC
Confidence 554 355998777777777778888778 455566778854322211112334556677 9999994 54334
No 58
>2b9s_B DNA topoisomerase I-like protein; vanadate complex, isomerase/DNA complex; HET: DNA; 2.27A {Leishmania donovani}
Probab=47.30 E-value=6.4 Score=21.89 Aligned_cols=22 Identities=5% Similarity=-0.097 Sum_probs=16.9
Q ss_pred cccccccchhhccHHHHHHHhCCeee
Q psy5380 44 EYHMFCRDKAELYMPELYNKIGVGMM 69 (129)
Q Consensus 44 ~~~l~~~~~~e~~~~~~~~~~gi~~~ 69 (129)
..|++|+++ .+.+|++++|.+-
T Consensus 19 KiNYlDPRI----tvaWcKr~~VPie 40 (62)
T 2b9s_B 19 KINYIDPRI----ICSWAKAQDVPIN 40 (62)
T ss_dssp HHHTSCHHH----HHHHHHHTTCCGG
T ss_pred hhhccCchh----hhhhhhhcCCCHH
Confidence 567788775 4679999998764
No 59
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=47.26 E-value=48 Score=23.67 Aligned_cols=70 Identities=11% Similarity=0.131 Sum_probs=42.8
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 68 gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 139 (292)
T 2vc6_A 68 GRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSA 139 (292)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred CCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccC
Confidence 554 45799888888888888888888853344444445444332111122345666789999985 54344
No 60
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=46.91 E-value=19 Score=21.86 Aligned_cols=24 Identities=17% Similarity=0.235 Sum_probs=22.3
Q ss_pred cHHHHHHHhCCeeeeecccccccc
Q psy5380 56 YMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
.+.+.++++||.++-.-||++-+.
T Consensus 31 ~I~e~A~e~gVPi~e~~~LAr~Ly 54 (98)
T 3c01_E 31 AVRAYAEKVGVPVIVDIKLARSLF 54 (98)
T ss_dssp HHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHcCCCeecCHHHHHHHH
Confidence 578899999999999999999987
No 61
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=46.89 E-value=50 Score=23.67 Aligned_cols=70 Identities=10% Similarity=0.096 Sum_probs=43.0
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|.....++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 75 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg 146 (297)
T 3flu_A 75 KRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTV 146 (297)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhc
Confidence 554 35699888888888888888888854444444455544332112223445666799999994 44334
No 62
>2k5j_A Uncharacterized protein YIIF; structure, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Shigella flexneri 5 str}
Probab=46.61 E-value=6.9 Score=22.69 Aligned_cols=30 Identities=10% Similarity=0.083 Sum_probs=24.0
Q ss_pred cccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 99 PKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 99 ~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
-.+++++++.++++|+..+.+...+..-||
T Consensus 14 I~Lpdel~~~Ld~la~~~g~srselireAi 43 (80)
T 2k5j_A 14 LDLSNEVIKQLDDLEVQRNLPRADLLREAV 43 (80)
T ss_dssp EEECHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 356889999999999999988777666554
No 63
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=45.81 E-value=58 Score=23.25 Aligned_cols=71 Identities=14% Similarity=0.147 Sum_probs=44.8
Q ss_pred cCCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 7 QGWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 7 ~G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
.|++ --.|++..+..+..+..+.+.+.|...+.++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 71 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg 143 (293)
T 1f6k_A 71 KDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTG 143 (293)
T ss_dssp TTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHC
T ss_pred CCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccC
Confidence 3555 45799988888888888888888854444454445444332111223355677799999995 66555
No 64
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=45.78 E-value=54 Score=23.59 Aligned_cols=70 Identities=7% Similarity=0.003 Sum_probs=43.1
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-.-|+..+++.....+...++..++.++.|. |-..|
T Consensus 84 grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg 155 (304)
T 3cpr_A 84 DRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSG 155 (304)
T ss_dssp TTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred CCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 554 34799988888888888888888853344444444443332111223355666789999995 65445
No 65
>2ekg_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; flavoenzyme, prodh, beta-alpha-barrel inhibitor, inactivation, flavocyanine; HET: LYX FAD; 1.90A {Thermus thermophilus} PDB: 2g37_A*
Probab=45.50 E-value=57 Score=24.00 Aligned_cols=59 Identities=15% Similarity=0.082 Sum_probs=42.6
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCC-ceEecccccccccchhhccHHHHHHHhCCeeeeeccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCAT-PIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~-~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
++++..++...+..+.+.+.+.|+.+ ..-.|.-|.+-+. +-....+.|..+..|.|.+.
T Consensus 241 ~~~vATHN~~si~~a~~l~~~~gi~~~~~eFq~L~GM~d~------l~~~L~~~g~~vr~YvP~G~ 300 (327)
T 2ekg_A 241 YVAFATHDPRIIAELKRYTEAMGIPRSRFEFQFLYGVRPE------EQRRLAREGYTVRAYVPYGR 300 (327)
T ss_dssp CEEEECCCHHHHHHHHHHHHHTTCCGGGEEEEEETTSSHH------HHHHHHHTTCEEEEEEEEET
T ss_pred ceeEeCCCHHHHHHHHHHHHHcCCCCCCEEEEcCCCCCHH------HHHHHHhCCCCEEEEEEEcc
Confidence 99999999999999999998887533 2335555666432 22233457888999999886
No 66
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=45.28 E-value=53 Score=23.86 Aligned_cols=70 Identities=10% Similarity=0.127 Sum_probs=42.6
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|...+.++-..|+..+++....-+...++..++.++.|. |-..|
T Consensus 90 grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg 161 (315)
T 3si9_A 90 KRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSV 161 (315)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhC
Confidence 443 46799888888888888888888854444444445544332111223445666799999995 43333
No 67
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=44.85 E-value=52 Score=23.47 Aligned_cols=70 Identities=11% Similarity=0.158 Sum_probs=42.3
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|...+.++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 69 gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg 140 (291)
T 3tak_A 69 KRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTG 140 (291)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccC
Confidence 554 35699888888888888888888853344444444543332111223445566799999994 44334
No 68
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=44.60 E-value=50 Score=23.77 Aligned_cols=70 Identities=7% Similarity=0.079 Sum_probs=42.7
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..+++....-+...++..++.++.|. |-..|
T Consensus 80 grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 151 (301)
T 1xky_A 80 KRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSI 151 (301)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHS
T ss_pred CCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 554 45799988888887888888887843344444445443332111122345666789999995 65444
No 69
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=44.54 E-value=52 Score=23.45 Aligned_cols=71 Identities=11% Similarity=0.142 Sum_probs=43.1
Q ss_pred cCCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 7 QGWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 7 ~G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
.|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 67 ~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 139 (289)
T 2yxg_A 67 NGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTA 139 (289)
T ss_dssp TTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 3555 44799888888887777888887853344444445443332111223345666789999995 54444
No 70
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=44.07 E-value=59 Score=23.54 Aligned_cols=64 Identities=9% Similarity=0.048 Sum_probs=40.2
Q ss_pred cCCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEeccc-ccccccchhhccHHHHHHHhCCeeeeec
Q psy5380 7 QGWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTE-YHMFCRDKAELYMPELYNKIGVGMMAWS 72 (129)
Q Consensus 7 ~G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~-~~l~~~~~~e~~~~~~~~~~gi~~~~~s 72 (129)
.|++ --+|++. +..+..+..+.+.+.|. .-+.+-.+ |+..+++....-+...++..++.++.|.
T Consensus 79 ~grvpViaGvg~-st~~ai~la~~A~~~Ga-davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 79 NGRATVVAGIGY-SVDTAIELGKSAIDSGA-DCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp TTSSEEEEEECS-SHHHHHHHHHHHHHTTC-SEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred CCCCeEEecCCc-CHHHHHHHHHHHHHcCC-CEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 3555 3469999 88888788888888784 44444444 4443332111223355677789999999
No 71
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=43.92 E-value=26 Score=24.30 Aligned_cols=58 Identities=7% Similarity=-0.055 Sum_probs=33.0
Q ss_pred EEecCCCHH-----HHHHHHHHHHhcCCCCceEeccccc---ccccchhhccHHHHHHHhCCeeee-eccc
Q psy5380 13 WGTSRWSPV-----EIMEAYSNCRQFNCATPIIEQTEYH---MFCRDKAELYMPELYNKIGVGMMA-WSPI 74 (129)
Q Consensus 13 iG~Sn~~~~-----~~~~~~~~~~~~g~~~~~~~q~~~~---l~~~~~~e~~~~~~~~~~gi~~~~-~spL 74 (129)
+|+|.+... .+.+..+.+.+.|. ..+++... -++.. .-.++.+.++++|+.+.+ .+|.
T Consensus 4 igi~~~~~~~~~~~~~~~~l~~~~~~G~---~~vEl~~~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~~ 70 (294)
T 3vni_A 4 HGIYYAYWEQEWEADYKYYIEKVAKLGF---DILEIAASPLPFYSDI-QINELKACAHGNGITLTVGHGPS 70 (294)
T ss_dssp EEEEGGGGCSSSCCCHHHHHHHHHHHTC---SEEEEESTTGGGCCHH-HHHHHHHHHHHTTCEEEEEECCC
T ss_pred EEEehhhhcCCcCcCHHHHHHHHHHcCC---CEEEecCcccCCcCHH-HHHHHHHHHHHcCCeEEEeecCC
Confidence 566654222 36667776666664 44444322 11111 124578889999999887 5553
No 72
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=43.59 E-value=61 Score=23.50 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=42.8
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|...+.++-..|+..+++....-+...++..++.++.|. |-..|
T Consensus 91 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 162 (314)
T 3qze_A 91 GRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTS 162 (314)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHS
T ss_pred CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 554 36699888888888888888888853344444445544332111223445666799999994 44334
No 73
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=43.53 E-value=52 Score=23.86 Aligned_cols=70 Identities=10% Similarity=0.116 Sum_probs=42.6
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|...+.++-..|+..+++....-+...++..++.++.|. |-..|
T Consensus 92 grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 163 (315)
T 3na8_A 92 HRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSG 163 (315)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhC
Confidence 543 56799877887777777888887843333344445544332212223445666789999996 65444
No 74
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=43.34 E-value=28 Score=23.81 Aligned_cols=18 Identities=17% Similarity=0.017 Sum_probs=11.0
Q ss_pred cHHHHHHHhCCeeeeecc
Q psy5380 56 YMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~sp 73 (129)
++.+.++++|+.+.+..+
T Consensus 65 ~~~~~l~~~gl~i~~~~~ 82 (257)
T 3lmz_A 65 AFHDKCAAHKVTGYAVGP 82 (257)
T ss_dssp HHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHcCCeEEEEec
Confidence 455666677776665544
No 75
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=42.90 E-value=65 Score=23.14 Aligned_cols=70 Identities=11% Similarity=0.105 Sum_probs=43.3
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhC-Ceeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIG-VGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~g-i~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..+++....-+...++..+ +.++.|. |-..|
T Consensus 79 grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg 151 (303)
T 2wkj_A 79 GKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSG 151 (303)
T ss_dssp TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHC
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccC
Confidence 555 4469998888888777788888785444444444544433211122334566677 9999995 76555
No 76
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=42.78 E-value=57 Score=23.26 Aligned_cols=67 Identities=9% Similarity=0.120 Sum_probs=41.1
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccc-cccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHM-FCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l-~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
--+|++..+..+..+..+.+.+.|...+.++-..|+. .+++.....+...++..++.++.|. |-..|
T Consensus 68 ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 136 (288)
T 2nuw_A 68 LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATG 136 (288)
T ss_dssp EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhC
Confidence 4589998888888888888888774333334334443 3322111223355667799999995 65444
No 77
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=41.60 E-value=63 Score=23.08 Aligned_cols=67 Identities=7% Similarity=0.083 Sum_probs=41.7
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccc-cccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHM-FCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l-~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
--+|++..+..+..+..+.+.+.|...+.++-..|+. .+++.....+...++..++.++.|. |-..|
T Consensus 68 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 136 (293)
T 1w3i_A 68 IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATG 136 (293)
T ss_dssp EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhC
Confidence 4589998888888888888888885334444444544 3332111223345666789999995 54444
No 78
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=41.35 E-value=55 Score=23.47 Aligned_cols=70 Identities=13% Similarity=0.191 Sum_probs=42.3
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..+++....-+...++..++.++.|. |-..|
T Consensus 68 grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 139 (297)
T 2rfg_A 68 GRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAV 139 (297)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred CCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 554 45799988888887777888877843333343344443322111123345666789999995 65445
No 79
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=41.31 E-value=61 Score=23.04 Aligned_cols=67 Identities=7% Similarity=0.147 Sum_probs=40.7
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccc-cccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHM-FCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l-~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
--+|++..+..+..+..+.+.+.|...+.++-..|+- .+++.....+...++..++.++.|. |-..|
T Consensus 67 vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 135 (286)
T 2r91_A 67 VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVG 135 (286)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcC
Confidence 4589998888888888888888784333334334443 3322111223345666789999995 54444
No 80
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=40.74 E-value=64 Score=23.81 Aligned_cols=69 Identities=7% Similarity=0.052 Sum_probs=41.0
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccc-cccchhhccHHHHHH-HhCCeeeee-cccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHM-FCRDKAELYMPELYN-KIGVGMMAW-SPISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l-~~~~~~e~~~~~~~~-~~gi~~~~~-spL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+. .+++....-+...++ ..++.++.| .| ..|
T Consensus 91 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P-~tg 163 (344)
T 2hmc_A 91 AGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP-YYG 163 (344)
T ss_dssp TTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG-GGT
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC-ccC
Confidence 444 3478988887777777777777774333334334443 332211122334566 568999999 57 656
No 81
>4h6q_A Proline dehydrogenase; BETA8-alpha8-barrel, flavoenzyme, oxidoreductase; HET: FAD; 1.36A {Deinococcus radiodurans} PDB: 4h6r_A*
Probab=40.44 E-value=79 Score=23.09 Aligned_cols=60 Identities=10% Similarity=0.013 Sum_probs=43.3
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCC-ceEecccccccccchhhccHHHHHHHhCCeeeeeccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCAT-PIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~-~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
.++++..|++..+..+.+.+...|..+ -.-.|.-|.+-+. +-....+.|..+..|.|.+.
T Consensus 225 ~~~~vATHN~~si~~a~~l~~~~g~~~~~~eFq~L~GM~d~------l~~~L~~~g~~vr~YvP~G~ 285 (312)
T 4h6q_A 225 NYTNVATHDERIIDDVKRFVLAHGIGKDAFEFQMLYGIRRD------LQKQLAAEGYRVRVYLPYGR 285 (312)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHTTCCTTSEEEEEETTSCHH------HHHHHHHTTCCEEEEEEESS
T ss_pred CceeEecCCHHHHHHHHHHHHHcCCCCCCEEEEccCCCCHH------HHHHHHhcCCCEEEEeEEcc
Confidence 578999999999999999998888543 2345666666432 22233456888999999885
No 82
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=40.28 E-value=61 Score=23.72 Aligned_cols=70 Identities=9% Similarity=0.158 Sum_probs=42.1
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..+++....-+...++..++.++.|. |-..|
T Consensus 102 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg 173 (332)
T 2r8w_A 102 GRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTR 173 (332)
T ss_dssp TSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHC
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 555 34699888888777777788877843333343344443332111123345666789999995 65445
No 83
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=40.19 E-value=46 Score=23.80 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 20 PVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 20 ~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
++.++.+.+ .| ..-.++|---|++-++ +++++.|.++||.+++-.|
T Consensus 234 ~dti~~~~~----ag-~~~ivi~~g~si~~~~---~~~i~~a~~~gi~~~~~~~ 279 (283)
T 4ggi_A 234 VATIHRAAR----AG-LAGIVGEAGRLLVVDR---EAVIAAADDLGLFVLGVDP 279 (283)
T ss_dssp HHHHHHHHH----TT-CCEEEEETTBCEETTH---HHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHH----cC-CeEEEEcCCCcEEeCH---HHHHHHHHHcCCEEEEeCC
Confidence 355555544 34 2444579999986554 3689999999999998766
No 84
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=39.94 E-value=14 Score=21.63 Aligned_cols=24 Identities=13% Similarity=0.129 Sum_probs=22.2
Q ss_pred cHHHHHHHhCCeeeeecccccccc
Q psy5380 56 YMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
.+.+.++++||.++-.-||++-+.
T Consensus 31 ~I~~~A~e~~VPi~e~~~LAr~L~ 54 (83)
T 3bzy_B 31 QIIKLAELYDIPVIEDIPLARSLD 54 (83)
T ss_dssp HHHHHHHHTTCCEEECHHHHHHHH
T ss_pred HHHHHHHHcCCCEEeCHHHHHHHH
Confidence 578899999999999999999987
No 85
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=39.85 E-value=83 Score=22.40 Aligned_cols=53 Identities=17% Similarity=0.260 Sum_probs=34.7
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccc
Q psy5380 16 SRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 16 Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
+.-++.++.++.+.++..+ .+.++.+.++|.= -.-..+++.|+.++...||+.
T Consensus 219 ~eps~~~l~~l~~~ik~~~-v~~If~e~~~~~~-------~~~~ia~~~g~~v~~ld~l~~ 271 (291)
T 1pq4_A 219 QEPSAQELKQLIDTAKENN-LTMVFGETQFSTK-------SSEAIAAEIGAGVELLDPLAA 271 (291)
T ss_dssp BCCCHHHHHHHHHHHHTTT-CCEEEEETTSCCH-------HHHHHHHHHTCEEEEECTTCS
T ss_pred CCCCHHHHHHHHHHHHHcC-CCEEEEeCCCChH-------HHHHHHHHcCCeEEEEcCchh
Confidence 3567888888888887776 4666666665531 112246788888877777654
No 86
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=39.68 E-value=46 Score=24.03 Aligned_cols=70 Identities=9% Similarity=0.111 Sum_probs=41.6
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|...+.++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 83 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 154 (304)
T 3l21_A 83 DRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSA 154 (304)
T ss_dssp TTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHS
T ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 544 45689877888887877888888853444444445544322111123345556689999994 43333
No 87
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=38.97 E-value=69 Score=22.15 Aligned_cols=58 Identities=7% Similarity=-0.079 Sum_probs=35.8
Q ss_pred cEEEecC----CC------HHHHHHHHHHHHhcCCCCceEecccccc-cccchhhccHHHHHHHhCCeeeeecc
Q psy5380 11 MYWGTSR----WS------PVEIMEAYSNCRQFNCATPIIEQTEYHM-FCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 11 r~iG~Sn----~~------~~~~~~~~~~~~~~g~~~~~~~q~~~~l-~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
..+|++. ++ ...+.++.+.+.+.| +..+++...- .... -.++.+.++++|+.+.+..+
T Consensus 21 mklg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G---~~~vEl~~~~~~~~~--~~~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 21 MKLSLVISTSDAAFDALAFKGDLRKGMELAKRVG---YQAVEIAVRDPSIVD--WNEVKILSEELNLPICAIGT 89 (290)
T ss_dssp CEEEEEECCCC-------CHHHHHHHHHHHHHHT---CSEEEEECSCGGGSC--HHHHHHHHHHHTCCEEEEEC
T ss_pred ceeEEecccchhhccccccccCHHHHHHHHHHhC---CCEEEEcCCCcchhh--HHHHHHHHHHcCCeEEEEec
Confidence 4588877 32 345677777777766 4555554332 1222 24578899999999876654
No 88
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=38.79 E-value=70 Score=24.51 Aligned_cols=69 Identities=7% Similarity=0.077 Sum_probs=42.7
Q ss_pred ccEEEec---CCCHHHHHHHHHHHHhcCC-CCceEeccccccccc-chhhccHHHHHHHhCCeeeeecccccccc
Q psy5380 10 IMYWGTS---RWSPVEIMEAYSNCRQFNC-ATPIIEQTEYHMFCR-DKAELYMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 10 ir~iG~S---n~~~~~~~~~~~~~~~~g~-~~~~~~q~~~~l~~~-~~~e~~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
++.+-+. ..+++.++++++-....|. +..++.....|..-. ++ -.++.+.|+++|+-++.=...+.|.+
T Consensus 219 ~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~-l~~I~~ia~~~~~~lhvD~a~~~~~~ 292 (511)
T 3vp6_A 219 VILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP-IQEIADICEKYNLWLHVDAAWGGGLL 292 (511)
T ss_dssp EEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC-HHHHHHHHHHHTCEEEEEETTGGGGG
T ss_pred EEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc-HHHHHHHHHHcCCEEEEEccchhhHh
Confidence 4445442 2478888888865544443 234455555554322 22 34688999999999887777776655
No 89
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=38.30 E-value=90 Score=22.26 Aligned_cols=70 Identities=10% Similarity=0.136 Sum_probs=41.3
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccc-cccchhhccHHHHHHHh---CCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHM-FCRDKAELYMPELYNKI---GVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l-~~~~~~e~~~~~~~~~~---gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+. .+++.....+...++.. ++.++.|. |-..|
T Consensus 71 gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg 146 (294)
T 3b4u_A 71 APSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTM 146 (294)
T ss_dssp CGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHS
T ss_pred CCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhC
Confidence 544 4479988888888777888888774333333333443 22221111233456667 89999995 55444
No 90
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=37.22 E-value=66 Score=23.67 Aligned_cols=70 Identities=13% Similarity=0.204 Sum_probs=41.5
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++---|+..+++....-+...++..++.++.|. |-..|
T Consensus 99 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg 170 (343)
T 2v9d_A 99 RRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTG 170 (343)
T ss_dssp TSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHS
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcC
Confidence 554 45799888887777777788887843344444444443322111122345566789999984 54444
No 91
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=36.99 E-value=57 Score=23.52 Aligned_cols=66 Identities=11% Similarity=0.182 Sum_probs=41.4
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHH----HHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMP----ELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~----~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..++ +++. ..++..++.++.|. |-..|
T Consensus 80 grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~----~~l~~~f~~va~a~~lPiilYn~P~~tg 151 (306)
T 1o5k_A 80 GKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQ----EGLYQHYKYISERTDLGIVVYNVPGRTG 151 (306)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH----HHHHHHHHHHHTTCSSCEEEEECHHHHS
T ss_pred CCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH----HHHHHHHHHHHHhCCCCEEEEeCccccC
Confidence 554 3579988888888777788887784333344444444332 3444 44555689999985 55444
No 92
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=36.85 E-value=35 Score=23.48 Aligned_cols=58 Identities=9% Similarity=-0.016 Sum_probs=34.5
Q ss_pred EEecCCCH-----HHHHHHHHHHHhcCCCCceEecccccccccc--hhhccHHHHHHHhCCeeeeecc
Q psy5380 13 WGTSRWSP-----VEIMEAYSNCRQFNCATPIIEQTEYHMFCRD--KAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 13 iG~Sn~~~-----~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~--~~e~~~~~~~~~~gi~~~~~sp 73 (129)
+|++.++. ..+.+..+.+.+.| +..+++...-.... ..-.++.+.++++|+.+....+
T Consensus 4 ig~~~~~~~~~~~~~~~~~l~~~~~~G---~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 68 (290)
T 2qul_A 4 VGMFYTYWSTEWMVDFPATAKRIAGLG---FDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIG 68 (290)
T ss_dssp EEEETTSSCSSSCCCHHHHHHHHHHTT---CSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred eeEEeeeecCcccccHHHHHHHHHHhC---CCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecC
Confidence 67777652 23566666666666 45555543221110 1124578899999999888654
No 93
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=36.40 E-value=34 Score=21.28 Aligned_cols=44 Identities=11% Similarity=0.210 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeee
Q psy5380 19 SPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMA 70 (129)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~ 70 (129)
+++...++.+.+.+.| .+-+++|.-+ .++++.+.|+++||.++.
T Consensus 67 p~~~v~~~v~e~~~~g-~k~v~~~~G~-------~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 67 NPQNQLSEYNYILSLK-PKRVIFNPGT-------ENEELEEILSENGIEPVI 110 (122)
T ss_dssp CHHHHGGGHHHHHHHC-CSEEEECTTC-------CCHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHhcC-CCEEEECCCC-------ChHHHHHHHHHcCCeEEC
Confidence 4555555555555566 3545555443 135788999999999885
No 94
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=36.30 E-value=52 Score=23.96 Aligned_cols=60 Identities=5% Similarity=-0.120 Sum_probs=39.7
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|=|.++.+.+.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.+|
T Consensus 218 a~dEs~~~~~~~~~~i~~------~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 277 (342)
T 2okt_A 218 ALDEKATSLLDIINLIEL------YNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGMYEYG 277 (342)
T ss_dssp EESTTCCCHHHHHHHHHH------SCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBCSSCCH
T ss_pred EecCCCCCHHHHHHHHHh------CCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcCCcccH
Confidence 456677888888777654 346777776654211000135778999999999988766554
No 95
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=34.69 E-value=67 Score=23.89 Aligned_cols=60 Identities=8% Similarity=-0.084 Sum_probs=38.3
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.+|
T Consensus 256 a~dE~~~~~~~~~~~i~~------~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 315 (393)
T 1wuf_A 256 CLDENIRSVKDVEQAHSI------GSCRAINLKLARVGGMSSALKIAEYCALNEILVWCGGMLEAG 315 (393)
T ss_dssp EECTTCCSHHHHHHHHHH------TCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred EECCCcCCHHHHHHHHHh------CCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 445567788888777764 246777776665321101135678999999999877665443
No 96
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=34.65 E-value=52 Score=23.48 Aligned_cols=66 Identities=11% Similarity=0.088 Sum_probs=41.4
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHH----HHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMP----ELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~----~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..++ +++. ..++..++.++.|. |-..|
T Consensus 69 gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~----~~l~~~f~~ia~a~~lPiilYn~P~~tg 140 (292)
T 2ojp_A 69 GRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQ----EGLYQHFKAIAEHTDLPQILYNVPSRTG 140 (292)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCH----HHHHHHHHHHHTTCSSCEEEECCHHHHS
T ss_pred CCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH----HHHHHHHHHHHHhcCCCEEEEeCcchhc
Confidence 554 4479988888888777788877774333344444444332 3444 34555689999995 65445
No 97
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=34.43 E-value=96 Score=22.01 Aligned_cols=53 Identities=17% Similarity=0.271 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 17 RWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 17 n~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
.-++.++.++.+.++..+ .+.++.+.+++. . -.-..+++.|+.++.-.||..+
T Consensus 211 eps~~~l~~l~~~ik~~~-v~~if~e~~~~~---~----~~~~la~~~g~~v~~l~pl~~~ 263 (286)
T 3gi1_A 211 EPSPRQLKEIQDFVKEYN-VKTIFAEDNVNP---K----IAHAIAKSTGAKVKTLSPLEAA 263 (286)
T ss_dssp -CCHHHHHHHHHHHHHTT-CCEEEECTTSCT---H----HHHHHHHTTTCEEEECCCSCSC
T ss_pred CCCHHHHHHHHHHHHHcC-CCEEEEeCCCCh---H----HHHHHHHHhCCeEEEecccccC
Confidence 468899999999988887 577777776654 1 1223578889998887787653
No 98
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=33.86 E-value=74 Score=20.78 Aligned_cols=62 Identities=13% Similarity=0.064 Sum_probs=37.6
Q ss_pred cCCccEEEec---CCCHHHHHHHHHHH-HhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 7 QGWIMYWGTS---RWSPVEIMEAYSNC-RQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 7 ~G~ir~iG~S---n~~~~~~~~~~~~~-~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
.+..-.+|+. +.+.+.+.++.+.+ ...|+. +-.--++ +....|..++++|++.|+.+..|++
T Consensus 7 ~~~~lvvGIGcrrg~~~~~i~~ai~~aL~~~gl~----v~~lATi-d~K~dE~gL~e~A~~lgvPl~~~~~ 72 (155)
T 3by5_A 7 QAMVTVAGIGCRKGAASDAIIAAVRAAERAFGVT----VDYLATA-PLKADEAGLAEAAKGLSLSLEIVAQ 72 (155)
T ss_dssp ---CEEEEEEECSSCCHHHHHHHHHHHHHHHTCC----CCEEEES-SCCSCCHHHHHHHHHTTCCEEECCH
T ss_pred CCCEEEEEEccCCCCCHHHHHHHHHHHHHHCCCC----eEEEEch-hhhCCCHHHHHHHHHhCCCeEEECH
Confidence 3444556663 56788887777654 445542 2222222 3333367899999999999999863
No 99
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=33.82 E-value=1.5e+02 Score=22.35 Aligned_cols=68 Identities=10% Similarity=-0.025 Sum_probs=42.6
Q ss_pred HcCC--ccEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhc--cHHHHHHH-h-CCeeeeecccccc
Q psy5380 6 NQGW--IMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAEL--YMPELYNK-I-GVGMMAWSPISMA 77 (129)
Q Consensus 6 ~~G~--ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~--~~~~~~~~-~-gi~~~~~spL~~G 77 (129)
+.|| |-.-|+| +.+.+..+.++....|...++.+++-=++ -....+- ..++..++ . ++.+ .||--..|
T Consensus 156 ~~gKPViLStGma--Tl~Ei~~Ave~i~~~Gn~~iiLlhc~s~Y-Ptp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G 229 (385)
T 1vli_A 156 RLNRPMIFSTAGA--EISDVHEAWRTIRAEGNNQIAIMHCVAKY-PAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEH 229 (385)
T ss_dssp TTCSCEEEECTTC--CHHHHHHHHHHHHTTTCCCEEEEEECSSS-SCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSS
T ss_pred hcCCeEEEECCCC--CHHHHHHHHHHHHHCCCCcEEEEeccCCC-CCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCC
Confidence 3455 4556666 89999999999998886567766642221 1111111 23555555 4 6877 78888888
No 100
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=33.66 E-value=15 Score=22.13 Aligned_cols=25 Identities=16% Similarity=0.220 Sum_probs=22.6
Q ss_pred ccHHHHHHHhCCeeeeecccccccc
Q psy5380 55 LYMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 55 ~~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
..+.+.++++||.++-.-||++-+.
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr~Ly 54 (93)
T 2vt1_B 30 LAVRKYANEVGIPTVRDVKLARKLY 54 (93)
T ss_dssp HHHHHHHHHTTCCEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEECHHHHHHHH
Confidence 3578899999999999999999988
No 101
>2kel_A SVTR protein, uncharacterized protein 56B; homodimer, ribbon-helix-helix, transcription repres; NMR {Sulfolobus islandicus rod-shaped virus}
Probab=33.29 E-value=25 Score=18.82 Aligned_cols=30 Identities=3% Similarity=-0.044 Sum_probs=25.0
Q ss_pred cccCHHHHHHHHHHHhhCCCCcchhhhccc
Q psy5380 99 PKLNAAVMGEVERVLDNKPARPPMVSTLAL 128 (129)
Q Consensus 99 ~~~~~~~~~~l~~la~~~~~~~~~la~~AL 128 (129)
-+.++++..++..+|...|.+..++..-||
T Consensus 18 vrId~eLH~rlk~~Aa~~g~Sln~~i~eAL 47 (56)
T 2kel_A 18 IYMDKDLKTRLKVYCAKNNLQLTQAIEEAI 47 (56)
T ss_dssp EEEEHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 356789999999999999998887776665
No 102
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=33.21 E-value=1.2e+02 Score=24.78 Aligned_cols=53 Identities=8% Similarity=0.019 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHHHHhcCCCCceEecccccccccchh---------hccHHHHHHHhCCeeeee
Q psy5380 18 WSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKA---------ELYMPELYNKIGVGMMAW 71 (129)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~---------e~~~~~~~~~~gi~~~~~ 71 (129)
++++.+++..+..++.|+ ..+...+.||..++.+- -+.+++.|+++|+-+|.+
T Consensus 37 ~p~~~W~d~l~kmKa~G~-NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr 98 (654)
T 3thd_A 37 VPRFYWKDRLLKMKMAGL-NAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILR 98 (654)
T ss_dssp SCGGGHHHHHHHHHHTTC-SEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCC-CEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEec
Confidence 456677777777777774 44445778888776531 135789999999999986
No 103
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=32.05 E-value=85 Score=21.89 Aligned_cols=60 Identities=7% Similarity=-0.045 Sum_probs=35.5
Q ss_pred cEEEecCCCHH--HHHHHHHHHHhcCCCCceEeccc----cccc----ccchhhccHHHHHHHhCC-eeeeeccc
Q psy5380 11 MYWGTSRWSPV--EIMEAYSNCRQFNCATPIIEQTE----YHMF----CRDKAELYMPELYNKIGV-GMMAWSPI 74 (129)
Q Consensus 11 r~iG~Sn~~~~--~~~~~~~~~~~~g~~~~~~~q~~----~~l~----~~~~~e~~~~~~~~~~gi-~~~~~spL 74 (129)
..+|++++... .+.++.+.+.+.|. ..+|+- .... +.. .-..+.+.++++|+ .+....|.
T Consensus 6 mklG~~~~~~~~~~~~~~l~~~~~~G~---~~vEl~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gl~~~~~h~~~ 76 (303)
T 3aal_A 6 LKIGSHVSMSGKKMLLAASEEAASYGA---NTFMIYTGAPQNTKRKSIEEL-NIEAGRQHMQAHGIEEIVVHAPY 76 (303)
T ss_dssp CCEEEECCCCTTTTHHHHHHHHHHTTC---SEEEEESSCTTCCCCCCSGGG-CHHHHHHHHHHTTCCEEEEECCT
T ss_pred eeeceeeecCCCccHHHHHHHHHHcCC---CEEEEcCCCCCccCCCCCCHH-HHHHHHHHHHHcCCceEEEeccc
Confidence 34888776643 37788777777664 555551 1111 111 12357788999999 56655554
No 104
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=31.91 E-value=33 Score=24.03 Aligned_cols=60 Identities=7% Similarity=-0.089 Sum_probs=36.1
Q ss_pred EEEecCCCH---HHHHHHHHHHHhcCCCCceEecccccccc----cchhhccHHHHHHHhCCeeeeeccc
Q psy5380 12 YWGTSRWSP---VEIMEAYSNCRQFNCATPIIEQTEYHMFC----RDKAELYMPELYNKIGVGMMAWSPI 74 (129)
Q Consensus 12 ~iG~Sn~~~---~~~~~~~~~~~~~g~~~~~~~q~~~~l~~----~~~~e~~~~~~~~~~gi~~~~~spL 74 (129)
.+|+|.++. ..+.+..+.+.+.| +..+|+.+.-.. ....-.++.+.++++|+.+.+..|+
T Consensus 24 klgi~~~~~~~~~~~~~~l~~a~~~G---~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~ 90 (296)
T 2g0w_A 24 PITISSYTLGTEVSFPKRVKVAAENG---FDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYI 90 (296)
T ss_dssp CEEECGGGGTTTSCHHHHHHHHHHTT---CSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEECB
T ss_pred CceeechhcCCCCCHHHHHHHHHHcC---CCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehhh
Confidence 478877653 23566666666666 455555442110 0111235778899999999887763
No 105
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=31.26 E-value=54 Score=22.24 Aligned_cols=56 Identities=11% Similarity=0.059 Sum_probs=29.1
Q ss_pred EEecCCCH--HHHHHHHHHHHhcCCCCceEecccccc-----cccchhhccHHHHHHHhCCeeeeec
Q psy5380 13 WGTSRWSP--VEIMEAYSNCRQFNCATPIIEQTEYHM-----FCRDKAELYMPELYNKIGVGMMAWS 72 (129)
Q Consensus 13 iG~Sn~~~--~~~~~~~~~~~~~g~~~~~~~q~~~~l-----~~~~~~e~~~~~~~~~~gi~~~~~s 72 (129)
+|++.++. ..+.+..+.+.+.|. ..+++.... .+.. .-.++.+.++++|+.+.+..
T Consensus 9 lg~~~~~~~~~~~~~~l~~~~~~G~---~~vEl~~~~~~~~~~~~~-~~~~~~~~~~~~gl~~~~~~ 71 (272)
T 2q02_A 9 FCINRKIAPGLSIEAFFRLVKRLEF---NKVELRNDMPSGSVTDDL-NYNQVRNLAEKYGLEIVTIN 71 (272)
T ss_dssp EEEEGGGCTTSCHHHHHHHHHHTTC---CEEEEETTSTTSSTTTTC-CHHHHHHHHHHTTCEEEEEE
T ss_pred hhhcccccCCCCHHHHHHHHHHcCC---CEEEeecccccccccccc-CHHHHHHHHHHcCCeEEech
Confidence 67665542 235566666666553 444443211 1111 12346777888888776543
No 106
>1nla_A Transcriptional repressor ARC; 3(10) helix, beta-ribbon, beta-sheet, structural switching; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=30.95 E-value=37 Score=18.84 Aligned_cols=31 Identities=10% Similarity=0.064 Sum_probs=23.1
Q ss_pred cccccCHHHHHHHHHHHhhCCCCcchhhhcc
Q psy5380 97 LVPKLNAAVMGEVERVLDNKPARPPMVSTLA 127 (129)
Q Consensus 97 ~~~~~~~~~~~~l~~la~~~~~~~~~la~~A 127 (129)
+.-++++++.+.+...|+..|.+..+....+
T Consensus 10 f~lRlp~eLh~~l~~~A~~~GrSlN~~Iv~~ 40 (64)
T 1nla_A 10 FLNRWPREVLDLVRKVAEENGRSVNSEIYQR 40 (64)
T ss_dssp GGGSSCHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred eEeeCCHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 3446688999999999999998865544433
No 107
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=30.83 E-value=1.3e+02 Score=22.17 Aligned_cols=52 Identities=12% Similarity=0.174 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCCceEecc-c---cccc-------------ccchhhccHHHHHHHhCCeeee
Q psy5380 17 RWSPVEIMEAYSNCRQFNCATPIIEQT-E---YHMF-------------CRDKAELYMPELYNKIGVGMMA 70 (129)
Q Consensus 17 n~~~~~~~~~~~~~~~~g~~~~~~~q~-~---~~l~-------------~~~~~e~~~~~~~~~~gi~~~~ 70 (129)
||++++.++-.+..++.|. +-+++|. . |.+. .++. -+.+++.|+++||.|..
T Consensus 50 nWd~~eW~~~~~~mK~~Gi-kyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dl-v~~~l~aa~k~Gmkv~~ 118 (340)
T 4h41_A 50 NWGEKEWDLDFQHMKRIGI-DTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDL-VDMYLRLAEKYNMKFYF 118 (340)
T ss_dssp CCCHHHHHHHHHHHHHTTC-CEEEESCSEETTEESSCCHHHHHTTCCCCSBCH-HHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCC-CEEEEEEEeeCCeeccCcccccccCccCCcccH-HHHHHHHHHHhCCeEEE
Confidence 9999999988888888884 5555544 1 1111 1121 23467899999998754
No 108
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=30.73 E-value=54 Score=24.45 Aligned_cols=60 Identities=10% Similarity=-0.065 Sum_probs=37.9
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
-..|=|-++.+.+.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.+
T Consensus 243 Ia~dE~~~~~~~~~~~~~~------~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 302 (388)
T 3qld_A 243 VCLDESVRSVRELKLTARL------GAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVGGMYET 302 (388)
T ss_dssp EEESTTCCSHHHHHHHHHH------TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred EEeCCCCCCHHHHHHHHHc------CCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEecCccch
Confidence 3556677888877777654 24667777655431100023577899999999987765543
No 109
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=30.59 E-value=55 Score=24.12 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=38.7
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccch-hhccHHHHHHHhCCeeeeecccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDK-AELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~-~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
-..|=|-++.+++.++.+. ...+++|+..+. - .. .-..+...|+.+|+.++.-+.+.++
T Consensus 243 Ia~dE~~~~~~~~~~~i~~------~a~d~v~ik~~~-G-Git~~~~i~~~A~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 243 VAADESARSAHDVLRIARE------GTASVINIKLMK-A-GVAEGLKMIAIAQAAGLGLMIGGMVESI 302 (365)
T ss_dssp EEESTTCSSHHHHHHHHHH------TCCSEEEECHHH-H-CHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred EEECCCCCCHHHHHHHHHh------CCCCEEEEcCCc-c-CHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 3556677788877777654 346677776655 1 11 0124678999999999988776554
No 110
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=30.41 E-value=1.6e+02 Score=21.51 Aligned_cols=65 Identities=11% Similarity=0.101 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHHhcC-CCCceEecccccccccch---hhccHHHHHHHhCCeeeeeccccccccCCC
Q psy5380 18 WSPVEIMEAYSNCRQFN-CATPIIEQTEYHMFCRDK---AELYMPELYNKIGVGMMAWSPISMALISGK 82 (129)
Q Consensus 18 ~~~~~~~~~~~~~~~~g-~~~~~~~q~~~~l~~~~~---~e~~~~~~~~~~gi~~~~~spL~~G~Ltgk 82 (129)
.+.+.++++++-....+ .++.+++..+.|+.-.-. .-.++.++|+++|+-++.=...+.+.++|+
T Consensus 173 ~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~ 241 (435)
T 3piu_A 173 ITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP 241 (435)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Confidence 46788887776543222 134455555555532211 124678899999999987666655555543
No 111
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=30.22 E-value=28 Score=24.05 Aligned_cols=19 Identities=5% Similarity=-0.127 Sum_probs=12.1
Q ss_pred cHHHHHHHhCCeeeeeccc
Q psy5380 56 YMPELYNKIGVGMMAWSPI 74 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~spL 74 (129)
++.+.++++|+.+.+.+|.
T Consensus 52 ~~~~~l~~~gl~~~~~~~~ 70 (286)
T 3dx5_A 52 RELNCLKDKTLEITMISDY 70 (286)
T ss_dssp HHHHHTGGGTCCEEEEECC
T ss_pred HHHHHHHHcCCeEEEEecC
Confidence 4556677777777666553
No 112
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=30.14 E-value=60 Score=24.06 Aligned_cols=60 Identities=5% Similarity=-0.149 Sum_probs=37.9
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+++|+.++.-+.+.+|
T Consensus 256 a~dE~~~~~~~~~~~i~~------~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 315 (386)
T 1wue_A 256 CLDENIRSLKDCQVALAL------GSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLGGMFESG 315 (386)
T ss_dssp EECTTCCSHHHHHHHHHH------TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred EeCCccCCHHHHHHHHHc------CCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEECCCcccH
Confidence 445577788877777654 246677776655311001135678899999999877665443
No 113
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=30.05 E-value=1.4e+02 Score=21.39 Aligned_cols=66 Identities=14% Similarity=0.178 Sum_probs=40.6
Q ss_pred cCCcc-EEEecCCCHHHHHHHHHHHHhcCCCCceEeccccc----ccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 7 QGWIM-YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYH----MFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 7 ~G~ir-~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~----l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
.|++. -+|++..+..+..+..+.+.+.|. .-+.+-.+|- -.+++.....+...++..++.++.|..
T Consensus 75 ~grvpviaGvg~~~t~~ai~la~~A~~~Ga-davlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (309)
T 3fkr_A 75 AGRVPVIVTTSHYSTQVCAARSLRAQQLGA-AMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDA 145 (309)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHTTC-SEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCCCcEEEecCCchHHHHHHHHHHHHHcCC-CEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 36654 458988888888888888888884 4444445553 222221112234456677999999953
No 114
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=29.84 E-value=1.1e+02 Score=21.60 Aligned_cols=65 Identities=9% Similarity=0.041 Sum_probs=37.7
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCCceEeccccccc-ccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMF-CRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~-~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
--+|++..+..+..+..+.+.+.|.....++-..|+.. +++.....+...++ ++.++.|. |-..|
T Consensus 65 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~--~lPiilYn~P~~tg 131 (283)
T 2pcq_A 65 FLVGLMEETLPQAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE--KMPLFLYHVPQNTK 131 (283)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH--HSCEEEEECHHHHC
T ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc--CCCEEEEeCccccC
Confidence 34789888888777777788877843333343344443 33211111223444 89999995 55444
No 115
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=29.80 E-value=67 Score=23.61 Aligned_cols=57 Identities=11% Similarity=0.040 Sum_probs=37.7
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchh-hccHHHHHHHhCCeeeeeccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKA-ELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~-e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
..|=|-++.+++.++.+. ...+++|+..+.+ ... -..+...|+.+|+.++.-+.+.+
T Consensus 240 a~dE~~~~~~~~~~~i~~------~~~d~v~~k~~~~--Git~~~~ia~~A~~~gi~~~~~~~~es 297 (367)
T 3dg3_A 240 IADESVPTPADVTREVLG------GSATAISIKTART--GFTGSTRVHHLAEGLGLDMVMGNQIDG 297 (367)
T ss_dssp EECTTCSSHHHHHHHHHH------TSCSEEEECHHHH--TTHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EecCCcCCHHHHHHHHHc------CCCCEEEeehhhh--hHHHHHHHHHHHHHcCCeEEECCcCCc
Confidence 445577788887777664 3467777776654 221 13477899999999987654433
No 116
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=29.27 E-value=1.4e+02 Score=21.44 Aligned_cols=69 Identities=10% Similarity=0.016 Sum_probs=41.4
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccc-cc--cccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEY-HM--FCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~-~l--~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|. .-+.+-.+| +. .+++.....+...++..++.++.|. |-..|
T Consensus 82 gr~pviaGvg~~~t~~ai~la~~A~~~Ga-davlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 155 (307)
T 3s5o_A 82 KNRLLLAGSGCESTQATVEMTVSMAQVGA-DAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTG 155 (307)
T ss_dssp TTSEEEEECCCSSHHHHHHHHHHHHHTTC-SEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHHcCC-CEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccC
Confidence 555 3679987777777777788887774 444444444 32 2222111223445666789999996 55445
No 117
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=29.18 E-value=1.1e+02 Score=21.98 Aligned_cols=70 Identities=10% Similarity=0.153 Sum_probs=40.2
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCC-CCceEecccccccccchhhccHHHHHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNC-ATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~-~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~s-pL~~G 77 (129)
|++ -.+|++..+..+..+..+.+.+.|- ..+.++-..|+..+++.....+...++..++.++.|. |-..|
T Consensus 75 grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg 147 (311)
T 3h5d_A 75 GRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVV 147 (311)
T ss_dssp SSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHS
T ss_pred CCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccC
Confidence 443 4568887778777777788877763 2333344444443322111123344555689999995 53334
No 118
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=28.70 E-value=78 Score=23.85 Aligned_cols=58 Identities=5% Similarity=-0.005 Sum_probs=35.7
Q ss_pred EEEecCCCHH----HHHHHHHHHHhcCCCC-ceEecccc---cccccchhhccHHHHHHHhCCeeeee
Q psy5380 12 YWGTSRWSPV----EIMEAYSNCRQFNCAT-PIIEQTEY---HMFCRDKAELYMPELYNKIGVGMMAW 71 (129)
Q Consensus 12 ~iG~Sn~~~~----~~~~~~~~~~~~g~~~-~~~~q~~~---~l~~~~~~e~~~~~~~~~~gi~~~~~ 71 (129)
-+|+|-|... +..+.++.+.++|... |.+++.+= .-.... -.++..+|++.|+.+++=
T Consensus 4 mlGiSvY~~~~~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~--~~~l~~~a~~~g~~vi~D 69 (372)
T 2p0o_A 4 MYGISVFLGEEITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQR--LTDLGAIAKAEKMKIMVD 69 (372)
T ss_dssp EEEEECCTTSCCCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHH--HHHHHHHHHHHTCEEEEE
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHH--HHHHHHHHHHCCCEEEEE
Confidence 4799988653 5556777777788543 33454321 111111 236789999999999863
No 119
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=28.66 E-value=65 Score=23.62 Aligned_cols=56 Identities=4% Similarity=-0.115 Sum_probs=34.7
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 16 SRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 16 Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
|-+++++++++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.++
T Consensus 247 ~~~~~~~~~~~i~~------~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 247 LATNEMSIVKILAD------DAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp TCCSHHHHHHHHHH------TCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEECSSCCH
T ss_pred CcCCHHHHHHHHHh------CCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecCCCcCH
Confidence 55677777777654 345667765554211000134678999999999887766554
No 120
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=28.54 E-value=85 Score=23.24 Aligned_cols=59 Identities=8% Similarity=0.052 Sum_probs=34.6
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
..|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.+
T Consensus 249 a~dE~~~~~~~~~~~i~~------~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 307 (383)
T 3i4k_A 249 MADESVWTPAEALAVVKA------QAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGATSLEG 307 (383)
T ss_dssp EESTTCSSHHHHHHHHHH------TCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCC
T ss_pred EecCccCCHHHHHHHHHc------CCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCcc
Confidence 334466677777666653 24566666655431100013467789999999886555443
No 121
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=28.52 E-value=58 Score=24.14 Aligned_cols=60 Identities=5% Similarity=-0.053 Sum_probs=36.1
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|=|-++.+.+.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.+|
T Consensus 248 a~dE~~~~~~~~~~~~~~------~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 307 (381)
T 3fcp_A 248 LADEAVATAYDGYQLAQQ------GFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGT 307 (381)
T ss_dssp EESTTCCSHHHHHHHHHT------TCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred EECCCcCCHHHHHHHHHc------CCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCCccH
Confidence 445566777777666553 245667766554310000234678999999999876665443
No 122
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=28.49 E-value=28 Score=22.60 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=22.3
Q ss_pred cHHHHHHHhCCeeeeecccccccc
Q psy5380 56 YMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
.+.+.++++||.++-.-||++-+.
T Consensus 84 ~I~e~A~e~gVPi~e~~~LAr~Ly 107 (144)
T 2jlj_A 84 TVRKIAEEEGVPILQRIPLARALY 107 (144)
T ss_dssp HHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHcCCCEEeCHHHHHHHH
Confidence 478899999999999999999988
No 123
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=28.37 E-value=29 Score=22.37 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=22.2
Q ss_pred cHHHHHHHhCCeeeeecccccccc
Q psy5380 56 YMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
.+.+.++++||.++-.-||++-|.
T Consensus 85 ~I~e~A~e~gVPi~e~~~LAr~Ly 108 (137)
T 3bzs_A 85 QIIKLAELYDIPVIEDIPLARSLY 108 (137)
T ss_dssp HHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHcCCCEEeCHHHHHHHH
Confidence 478899999999999999999987
No 124
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=28.11 E-value=68 Score=23.63 Aligned_cols=60 Identities=5% Similarity=-0.158 Sum_probs=37.9
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.++
T Consensus 239 a~dE~~~~~~~~~~~~~~------~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 239 MADESCCNSFDAERLIQI------QACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp EESTTCCSHHHHHHHHHT------TCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCCH
T ss_pred EEcCCcCCHHHHHHHHHc------CCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 444566778877777653 346777776655311001235778999999999887666554
No 125
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=28.10 E-value=1e+02 Score=21.63 Aligned_cols=55 Identities=7% Similarity=-0.095 Sum_probs=27.5
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCceEeccc-ccccccchh-hccHHHHHHHhCCeeeee
Q psy5380 16 SRWSPVEIMEAYSNCRQFNCATPIIEQTE-YHMFCRDKA-ELYMPELYNKIGVGMMAW 71 (129)
Q Consensus 16 Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~-~~l~~~~~~-e~~~~~~~~~~gi~~~~~ 71 (129)
.+.+.++++...+.+...= +..+-+-++ =|.+..+.. -+.+++.++++|+.++--
T Consensus 78 ~~~s~~ei~~~l~~al~~v-P~a~GvnNHmGS~~T~~~~~m~~vm~~l~~~gL~fvDS 134 (245)
T 2nly_A 78 SNLSVGEVKSRVRKAFDDI-PYAVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDS 134 (245)
T ss_dssp TTCCHHHHHHHHHHHHHHS-TTCCEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHC-CCcEEEecccccchhcCHHHHHHHHHHHHHCCCEEEcC
Confidence 3556777766665554321 233333332 244443320 123567778888776653
No 126
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=27.88 E-value=1e+02 Score=20.17 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=27.8
Q ss_pred cEEEec-CCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeee
Q psy5380 11 MYWGTS-RWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMA 70 (129)
Q Consensus 11 r~iG~S-n~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~ 70 (129)
..+|++ ..+++++.++.+. | .+.+ +..+. ..++++.|+++|+.+++
T Consensus 63 ~~ig~~~v~~~~~~~~a~~~----G---ad~i-v~~~~------~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 63 AIIGAGTVTSVEQCRKAVES----G---AEFI-VSPHL------DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp CEEEEESCCSHHHHHHHHHH----T---CSEE-ECSSC------CHHHHHHHHHHTCEEEC
T ss_pred cEEEecccCCHHHHHHHHHc----C---CCEE-EcCCC------CHHHHHHHHHcCCcEEC
Confidence 467884 4677777666653 2 3333 21111 23577889999988886
No 127
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=27.78 E-value=1.7e+02 Score=21.04 Aligned_cols=61 Identities=7% Similarity=-0.001 Sum_probs=36.1
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 13 WGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 13 iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
+.+...+.+.++++.+. .+ .+.+++...+|+.-.-..-+++.++|+++|+-++.=.+.+.|
T Consensus 168 ~~~~~~d~~~le~~l~~---~~-~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g 228 (409)
T 3kki_A 168 HPFMHNNCDHLRMLIQR---HG-PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLG 228 (409)
T ss_dssp EEECTTCHHHHHHHHHH---HC-SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred EEecCCCHHHHHHHHHh---cC-CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCcccc
Confidence 34444567777776653 12 356666666665322111346889999999988754444333
No 128
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=27.77 E-value=67 Score=23.83 Aligned_cols=60 Identities=8% Similarity=0.004 Sum_probs=36.3
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.+|
T Consensus 249 a~dE~~~~~~~~~~~~~~------~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 308 (382)
T 3dgb_A 249 MADESIECVEDAFNLARE------GAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLEGG 308 (382)
T ss_dssp EESTTCSSHHHHHHHHHH------TCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred EeCCCcCCHHHHHHHHHc------CCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecCCCccH
Confidence 445566777777666653 245666666544210000134678999999999877665543
No 129
>1m0d_A Endonuclease, endodeoxyribonuclease I; holliday junction resolvase, homodimer, domain swapped, composite active site, hydrolase; 1.90A {Enterobacteria phage T7} SCOP: c.52.1.17 PDB: 1m0i_A 2pfj_A 1fzr_A 3cae_A
Probab=27.34 E-value=1.3e+02 Score=19.39 Aligned_cols=51 Identities=12% Similarity=0.073 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCceE-ecccccccccchhhccHHHHHHHhCCeee
Q psy5380 18 WSPVEIMEAYSNCRQFNCATPII-EQTEYHMFCRDKAELYMPELYNKIGVGMM 69 (129)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~-~q~~~~l~~~~~~e~~~~~~~~~~gi~~~ 69 (129)
|+.+.-.....+.+.+-...+.+ .|...+-+.... -..--++|.++|+..-
T Consensus 59 ~~~~dR~K~k~ikeq~P~ldirfvf~~~~~ki~K~s-~ttya~Wc~k~g~~~~ 110 (138)
T 1m0d_A 59 WESDDRKKHLLIREQHPELDIRIVFSSSRTKLYKGS-PTSYGEFCEKHGIKFA 110 (138)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEEEESCTTSBSSTTC-SCBHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHHHHCCCceEEEEEeccccceeccC-CCcHHHHHHHcCCcee
Confidence 67777777777777664333443 688888888653 3456789999999443
No 130
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=27.19 E-value=27 Score=19.76 Aligned_cols=31 Identities=10% Similarity=0.055 Sum_probs=23.0
Q ss_pred cccccCHHHHHHHHHHHhhCCCCcchhhhcc
Q psy5380 97 LVPKLNAAVMGEVERVLDNKPARPPMVSTLA 127 (129)
Q Consensus 97 ~~~~~~~~~~~~l~~la~~~~~~~~~la~~A 127 (129)
+.-++++++.+++++.|+..+.+..+....+
T Consensus 22 f~LRlP~eL~~~L~~~A~~~grSlNaeIv~~ 52 (69)
T 3qoq_A 22 FVVRLPEGMREQIAEVARSHHRSMNSEIIAR 52 (69)
T ss_dssp EEEECCTTHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eEEECCHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 3345678999999999999998865554433
No 131
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=27.18 E-value=1.2e+02 Score=20.42 Aligned_cols=52 Identities=8% Similarity=-0.078 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 19 SPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
+...++++.+.++++|+ ++.++...++..... -...++.|++.|...+...|
T Consensus 61 ~~~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~--~~~~i~~A~~lGa~~v~~~~ 112 (262)
T 3p6l_A 61 DAQTQKEIKELAASKGI-KIVGTGVYVAEKSSD--WEKMFKFAKAMDLEFITCEP 112 (262)
T ss_dssp CHHHHHHHHHHHHHTTC-EEEEEEEECCSSTTH--HHHHHHHHHHTTCSEEEECC
T ss_pred CHHHHHHHHHHHHHcCC-eEEEEeccCCccHHH--HHHHHHHHHHcCCCEEEecC
Confidence 45556666666666664 444444333321111 12345566666665555443
No 132
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=27.16 E-value=56 Score=24.44 Aligned_cols=59 Identities=14% Similarity=0.085 Sum_probs=39.8
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccch-hhccHHHHHHHhCCeeeeecccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDK-AELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~-~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
-..|=|-++.+.+.++.+. ..++++|+..+. - .. .-..+...|+.+|+.++.-+.+.++
T Consensus 273 Ia~dE~~~~~~~~~~~i~~------~a~d~i~~k~~~-G-Git~~~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 273 VAADESVASATDAARLARN------AAVDVLNIKLMK-C-GIVEALDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp EEESTTCCSHHHHHHHHHT------TCCSEEEECHHH-H-CHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred EEeCCcCCCHHHHHHHHHc------CCCCEEEecccc-c-CHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 4566778888887777653 346777777655 1 11 1234678999999999987766554
No 133
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=26.94 E-value=32 Score=21.72 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=22.2
Q ss_pred cHHHHHHHhCCeeeeecccccccc
Q psy5380 56 YMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
.+.+.++++||.++-.-||++-+.
T Consensus 75 ~I~~~A~e~~VPi~e~~~LAr~Ly 98 (123)
T 2jli_A 75 TVRKIAEEEGVPILQRIPLARALY 98 (123)
T ss_dssp HHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHcCCCEEeCHHHHHHHH
Confidence 478899999999999999999987
No 134
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=26.82 E-value=78 Score=23.26 Aligned_cols=60 Identities=5% Similarity=-0.065 Sum_probs=35.8
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.+|
T Consensus 243 a~dE~~~~~~~~~~~~~~------~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1chr_A 243 MADESLSTLASAFDLARD------RSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp EESSSCCSHHHHHHHHTT------TSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECCSCCTT
T ss_pred EeCCCcCCHHHHHHHHHc------CCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecCCCccH
Confidence 344566777766666542 235666666554310000234678999999999877666554
No 135
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=26.79 E-value=1.6e+02 Score=21.95 Aligned_cols=61 Identities=8% Similarity=0.036 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHHHhcCCCC-ceEecccccccc-cchhhccHHHHHHHhCCeeeeecccccccc
Q psy5380 18 WSPVEIMEAYSNCRQFNCAT-PIIEQTEYHMFC-RDKAELYMPELYNKIGVGMMAWSPISMALI 79 (129)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~-~~~~q~~~~l~~-~~~~e~~~~~~~~~~gi~~~~~spL~~G~L 79 (129)
.+++.++++++-..+.|..+ .+++...-|..- .++ -.++.+.|+++|+-++.=...+.|.+
T Consensus 217 ~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~-l~~I~~la~~~~~~lhvD~a~g~~~~ 279 (486)
T 1js3_A 217 MRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN-LLEVGPICHEEDIWLHVDAAYAGSAF 279 (486)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC-HHHHHHHHHHTTCEEEEECTTGGGGG
T ss_pred CCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC-HHHHHHHHHHcCCEEEEehhhHHHHH
Confidence 47888888876543333222 344444433321 122 34688999999998887666666544
No 136
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=26.60 E-value=50 Score=23.56 Aligned_cols=66 Identities=8% Similarity=0.092 Sum_probs=41.3
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHH----HHHHhCCeeeeec-ccccc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPE----LYNKIGVGMMAWS-PISMA 77 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~----~~~~~gi~~~~~s-pL~~G 77 (129)
|++ --+|++..+..+..+..+.+.+.|...+.++-..|+..+ ++++.. .++..++.++.|. |-..|
T Consensus 69 gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s----~~~l~~~f~~ia~a~~lPiilYn~P~~tg 140 (291)
T 3a5f_A 69 KRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTT----QKGLVKHFKAVSDAVSTPIIIYNVPGRTG 140 (291)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC----HHHHHHHC-CTGGGCCSCEEEEECHHHHS
T ss_pred CCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC----HHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 554 457898888888878888888878533444444444432 234543 3455689999985 55444
No 137
>3ess_A Cholix toxin; ADP-ribosyl transferase, domain III (C-terminal catalytic domain), alpha-beta complex, transferase, transferase,toxin; HET: 18N; 1.19A {Vibrio cholerae} PDB: 2q6m_A* 3ki3_A* 3ki1_A* 3ki0_A* 3ki2_A* 3ki4_A* 3ki5_A* 3ki6_A* 3ki7_A* 3ny6_A*
Probab=26.56 E-value=77 Score=21.39 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=19.5
Q ss_pred EEecCCCHHHHHHHHHHHHhcC
Q psy5380 13 WGTSRWSPVEIMEAYSNCRQFN 34 (129)
Q Consensus 13 iG~Sn~~~~~~~~~~~~~~~~g 34 (129)
=|+.||+..+++...+...+.|
T Consensus 29 qGvtNWT~qeL~atHqaLt~eG 50 (230)
T 3ess_A 29 QGVTNWTYQELEATHQALTREG 50 (230)
T ss_dssp TEEESCCHHHHHHHHHHHHHTT
T ss_pred cccccccHHHHHHHHHHHhhCc
Confidence 3899999999999998888776
No 138
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=26.18 E-value=57 Score=22.07 Aligned_cols=13 Identities=23% Similarity=0.079 Sum_probs=6.4
Q ss_pred HHHHHHHhCCeee
Q psy5380 57 MPELYNKIGVGMM 69 (129)
Q Consensus 57 ~~~~~~~~gi~~~ 69 (129)
++..|+++|+.++
T Consensus 152 il~l~k~~g~~iv 164 (212)
T 1v77_A 152 AWKLVEKYKVRRF 164 (212)
T ss_dssp HHHHHHHHTCCEE
T ss_pred HHHHHHhcCCCEE
Confidence 4445555555444
No 139
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=26.01 E-value=1.2e+02 Score=21.41 Aligned_cols=52 Identities=12% Similarity=0.144 Sum_probs=32.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccc
Q psy5380 17 RWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 17 n~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
.-++.++.++.+.++..+ .+.++.+.+++. . -.-..+++.|+.+..-.||+.
T Consensus 206 eps~~~l~~l~~~ik~~~-v~~if~e~~~~~---~----~~~~ia~~~g~~v~~ld~l~~ 257 (284)
T 2prs_A 206 QPGAQRLHEIRTQLVEQK-ATCVFAEPQFRP---A----VVESVARGTSVRMGTLDPLGT 257 (284)
T ss_dssp CCCHHHHHHHHHHHHHTT-CCEEEECTTSCS---H----HHHHHTTTSCCEEEECCTTCT
T ss_pred CCCHHHHHHHHHHHHHcC-CCEEEEeCCCCh---H----HHHHHHHHcCCeEEEeccCcc
Confidence 467788888888777776 466666665543 1 112235677777766556654
No 140
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=25.83 E-value=63 Score=23.65 Aligned_cols=57 Identities=9% Similarity=-0.064 Sum_probs=33.3
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 15 TSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 15 ~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
=|-++.+.+.++.+. ...+++|+..+.+---..-..+...|+++|+.++.-+.+.++
T Consensus 246 E~~~~~~~~~~~i~~------~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 246 ESLSSLSSAFELARD------HAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp TTCCSHHHHHHHHHT------TCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred CCCCCHHHHHHHHHh------CCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcchH
Confidence 345666666666543 235666665544211000134677899999999887765444
No 141
>1jvr_A HTLV-II MA, MA, human T-cell leukemia virus type II matrix protein; HTLV-II matrix protein, retroviral matrix protein; NMR {Human t-lymphotropic virus 2} SCOP: a.61.1.2
Probab=25.62 E-value=41 Score=21.19 Aligned_cols=33 Identities=9% Similarity=0.204 Sum_probs=24.6
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCceEecccccccc
Q psy5380 14 GTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFC 49 (129)
Q Consensus 14 G~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~ 49 (129)
|=|.|+..+++++++.+.+ .++=.+-+.||++-
T Consensus 38 gPS~fDFhqLr~fLklAl~---TPvWlnPI~YSlLA 70 (137)
T 1jvr_A 38 GPSDFDFQQLRRFLKLALK---TPIWLNPIDYSLLA 70 (137)
T ss_dssp CCSTTTHHHHHHHHHHHHT---CTTSTTTTCTTTHH
T ss_pred CCCcccHHHHHHHHHHHhc---CcccccchhHHHHH
Confidence 6789999999999998873 22334677888865
No 142
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=25.34 E-value=77 Score=23.14 Aligned_cols=57 Identities=14% Similarity=0.085 Sum_probs=32.6
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccc
Q psy5380 14 GTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 14 G~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
|=|-++.+.+.++.+. ...+++|+..+.+---..-..+...|+++|+.++.-+.+.+
T Consensus 244 dE~~~~~~~~~~~i~~------~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 300 (366)
T 1tkk_A 244 DESVFTPRQAFEVLQT------RSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSMIET 300 (366)
T ss_dssp CTTCCSHHHHHHHHHH------TCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSCC
T ss_pred cCCCCCHHHHHHHHHh------CCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 3355666666666543 23556666554421100013467789999999887766543
No 143
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=25.22 E-value=79 Score=23.11 Aligned_cols=60 Identities=10% Similarity=0.045 Sum_probs=36.4
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccc-ccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPI-SMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL-~~G 77 (129)
..|=|-++.+++.++.+. ...+.+|+..+.+---..-..+...|+.+|+.++.-+.+ .++
T Consensus 238 a~dE~~~~~~~~~~~l~~------~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~es~ 298 (354)
T 3jva_A 238 MADESCFDAQDALELVKK------GTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMAEETT 298 (354)
T ss_dssp EESTTCCSHHHHHHHHHH------TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCTTCCH
T ss_pred EEcCCcCCHHHHHHHHHc------CCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCCCcccH
Confidence 334466677777666653 245666666544311000235678999999999987777 444
No 144
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=25.16 E-value=79 Score=23.12 Aligned_cols=54 Identities=7% Similarity=-0.098 Sum_probs=31.3
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccc
Q psy5380 16 SRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPIS 75 (129)
Q Consensus 16 Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~ 75 (129)
|-++++.+.++.+. ...+.+|+..+.+---..-..+...|+++|+.++.-+.+.
T Consensus 245 ~~~~~~~~~~~i~~------~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 245 GLKSSREMRQIIKL------EAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp TCCSHHHHHHHHHH------TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred CCCCHHHHHHHHHh------CCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCc
Confidence 45666666666553 2456666655442110001246778999999988766543
No 145
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=25.13 E-value=92 Score=24.80 Aligned_cols=61 Identities=5% Similarity=0.044 Sum_probs=40.3
Q ss_pred ccEEEecCC----CHHHHHHHHHHHHhcCCCCceEecccccccccchh------hccHHHHHHHhCCeeeee
Q psy5380 10 IMYWGTSRW----SPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKA------ELYMPELYNKIGVGMMAW 71 (129)
Q Consensus 10 ir~iG~Sn~----~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~------e~~~~~~~~~~gi~~~~~ 71 (129)
++.+|.+.| ......+..+..+..|. ..+.+.+.|+..++.+- -+.+++.|+++|+-++..
T Consensus 58 f~i~gg~~H~~~~y~r~~~~~W~~mKa~G~-NtVr~~V~W~~hEP~~G~yDF~~LD~~ldla~e~GL~VIL~ 128 (552)
T 3u7v_A 58 FLMLAAQVNNSSAWPSQMAKVWPAIEKVGA-NTVQVPIAWEQIEPVEGQFDFSYLDLLLEQARERKVRLVLL 128 (552)
T ss_dssp ECEEEEECCTTCCSGGGHHHHHHHHHHHTC-SEEEEEEEHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEEeCCCCCchhhhHHHHHHHHHhCC-CEEEEEehhhccCCCCCccChhhHHHHHHHHHHCCCEEEEE
Confidence 667788877 54444444455566664 34444457787776531 146789999999999986
No 146
>4fc5_A TON_0340, putative uncharacterized protein; unknown function; 2.30A {Thermococcus onnurineus}
Probab=25.07 E-value=27 Score=25.17 Aligned_cols=41 Identities=15% Similarity=0.062 Sum_probs=25.2
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhC
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIG 65 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~g 65 (129)
--|||||..+-+..+....... ++++.. .|+.+++.+-++|
T Consensus 192 ~agVSNWGayaL~a~l~~~~~~------------~ll~~~-~e~~~L~~~~~~G 232 (270)
T 4fc5_A 192 VSAVSNWGAYGLVAQASIEVGR------------NLLEGW-DERRVIEAISSAG 232 (270)
T ss_dssp ECSSHHHHHHHHHHHHHHHHTS------------CTTTTC-CHHHHHHHHHHTT
T ss_pred EeccchHHHHHHHHHHHHhcCC------------CCCChH-hHHHHHHHHHHcC
Confidence 3589999999887776554321 133333 2556777777664
No 147
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=24.58 E-value=81 Score=23.40 Aligned_cols=60 Identities=7% Similarity=-0.082 Sum_probs=35.8
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.+|
T Consensus 247 a~dE~~~~~~~~~~~~~~------~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 306 (385)
T 3i6e_A 247 LADESVYGPEDMVRAAHE------GICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEAG 306 (385)
T ss_dssp EESTTCCSHHHHHHHHHH------TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCH
T ss_pred EEeCCcCCHHHHHHHHHc------CCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCCCCccH
Confidence 445566777777776654 245666666544210000134678899999999776554443
No 148
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=24.37 E-value=1.3e+02 Score=18.49 Aligned_cols=29 Identities=0% Similarity=-0.101 Sum_probs=20.7
Q ss_pred cHHHHHHHhCCeeeeeccccccccCCCcc
Q psy5380 56 YMPELYNKIGVGMMAWSPISMALISGKIE 84 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~spL~~G~Ltgk~~ 84 (129)
+-+.+|+++|+.+..-.|-..-.-...|.
T Consensus 71 ~AiayAek~G~~y~V~ep~~~~~r~ksYa 99 (108)
T 2lju_A 71 LAIAYAVAHKIDYTVLQDNPRTIVPKSYA 99 (108)
T ss_dssp HHHHHHHHTTCEEEEECSSCCCCCCCCCC
T ss_pred HHHHHHHHcCCEEEEecCCcccCCcCchH
Confidence 45779999999999988866443333333
No 149
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=24.20 E-value=1.8e+02 Score=20.94 Aligned_cols=65 Identities=6% Similarity=0.072 Sum_probs=39.9
Q ss_pred CCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEeccc-ccc--cccchhhccHHHHHHHhCCeeeeecc
Q psy5380 8 GWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTE-YHM--FCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 8 G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~-~~l--~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
|++ -.+|++..+..+..+..+.+.+.|. .-+.+-.+ |.. .+++.....+...++..++.++.|.-
T Consensus 79 grvpviaGvg~~~t~~ai~la~~a~~~Ga-davlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~ 147 (318)
T 3qfe_A 79 PDFPIMAGVGAHSTRQVLEHINDASVAGA-NYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNF 147 (318)
T ss_dssp TTSCEEEECCCSSHHHHHHHHHHHHHHTC-SEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHHcCC-CEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 554 3569987788877777788887774 55555566 432 22221122234566677999999953
No 150
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=24.17 E-value=1.1e+02 Score=22.95 Aligned_cols=60 Identities=8% Similarity=-0.126 Sum_probs=38.0
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccc-ccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPI-SMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL-~~G 77 (129)
..|=|.++.+++.++.+. ...+++|+..+-+---..-..+..+|+++|+.++.-+.. ..+
T Consensus 305 a~dE~~~~~~~~~~~i~~------~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~~et~ 365 (413)
T 1kko_A 305 VADEWCNTYQDIVDFTDA------GSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCNETE 365 (413)
T ss_dssp EECTTCCSHHHHHHHHHT------TCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCTTSCH
T ss_pred EcCCCCCCHHHHHHHHHh------CCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCCCCCH
Confidence 444566777777776653 246677776665321101235788999999999987664 444
No 151
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=24.14 E-value=1.4e+02 Score=21.12 Aligned_cols=59 Identities=7% Similarity=-0.081 Sum_probs=33.2
Q ss_pred CccEEEec---CCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeee
Q psy5380 9 WIMYWGTS---RWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAW 71 (129)
Q Consensus 9 ~ir~iG~S---n~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~ 71 (129)
.+..+-+. ..+.+.++++.+.. + ++.+++-...|+.-.-..-+++.++|+++|+-++.=
T Consensus 123 ~~~~~~~~~~~~~d~~~l~~~i~~~---~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 184 (393)
T 3kgw_A 123 RVHQMIKKPGEHYTLQEVEEGLAQH---K-PVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVD 184 (393)
T ss_dssp EEEEEECCTTCCCCHHHHHHHHHHH---C-CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEE
T ss_pred ceEEEeCCCCCCCCHHHHHHHHhhC---C-CcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEE
Confidence 34444432 35677777766431 2 455555444444221111347899999999988753
No 152
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=24.09 E-value=59 Score=24.26 Aligned_cols=59 Identities=10% Similarity=0.108 Sum_probs=37.5
Q ss_pred cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccch-hhccHHHHHHHhCCeeeeecccccc
Q psy5380 11 MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDK-AELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 11 r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~-~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
-..|=|-++.+.+.++.+. ...+++|+..+. - .. .-..+...|+.+|+.++.-+.+.++
T Consensus 244 Ia~dEs~~~~~~~~~~i~~------~a~d~v~~k~~~-G-Git~~~~i~~~A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 244 VAADESAASAEDVLRVAAE------RAATVVNIKLMK-G-GIAEALDIAAVARAAGLGLMIGGMVESV 303 (389)
T ss_dssp EEESTTCSSHHHHHHHHHT------TCCSEEEECHHH-H-HHHHHHHHHHHHHHTTCEEEECCSSCCH
T ss_pred EEECCCCCCHHHHHHHHHc------CCCCEEEecCCC-C-CHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 3556677777777776553 246667776555 1 11 0124678899999999887766544
No 153
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=23.96 E-value=2.2e+02 Score=21.09 Aligned_cols=63 Identities=10% Similarity=0.053 Sum_probs=34.4
Q ss_pred HHHHcC-CccEEEecCCCHH---HHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeee
Q psy5380 3 HAINQG-WIMYWGTSRWSPV---EIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAW 71 (129)
Q Consensus 3 ~l~~~G-~ir~iG~Sn~~~~---~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~ 71 (129)
+..+.| .+--||+++.+.. .+..-...+.+.| ..++-.-..++...+ ++.+.|+++|+.++--
T Consensus 84 ~al~~~~d~lvig~a~~gg~l~~~~~~~I~~Al~~G---~nVvsglh~~l~~~p---el~~~A~~~Gv~i~dv 150 (350)
T 2g0t_A 84 KAKEMGAEVLIIGVSNPGGYLEEQIATLVKKALSLG---MDVISGLHFKISQQT---EFLKIAHENGTRIIDI 150 (350)
T ss_dssp HHHHTTCCEEEECCCSCCHHHHHHHHHHHHHHHHTT---CEEEECCCC--CCHH---HHHHHHHHHTCCEEES
T ss_pred HHHhcCCCEEEEEecCCCCCCCHHHHHHHHHHHHcC---CcEEeCChhhhhCCH---HHHHHHHHCCCEEEEe
Confidence 344433 6788998777632 2222233333444 344333333455443 5778899999988764
No 154
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=23.95 E-value=1.4e+02 Score=21.26 Aligned_cols=61 Identities=5% Similarity=-0.030 Sum_probs=34.3
Q ss_pred CccEEEec---CCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 9 WIMYWGTS---RWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 9 ~ir~iG~S---n~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
++..+-+. ..+++.++++.+.. . ++.+++....|+.-.-..-+++.++|+++|+-++.=..
T Consensus 113 ~~~~v~~~~~~~~d~~~l~~~i~~~---~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 176 (411)
T 3nnk_A 113 EVHTIEVPWGEVFTPDQVEDAVKRI---R-PRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDAT 176 (411)
T ss_dssp EEEEEECCTTCCCCHHHHHHHHHHH---C-CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred eEEEEecCCCCCCCHHHHHHHHhhC---C-CeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence 45555543 23677777766431 2 45565544444322111134789999999998875433
No 155
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=23.48 E-value=80 Score=23.29 Aligned_cols=59 Identities=8% Similarity=-0.047 Sum_probs=34.6
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
..|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+++|+.++.-+.+.+
T Consensus 246 a~dE~~~~~~~~~~~i~~------~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es 304 (377)
T 3my9_A 246 LADESCFDAVDLMEVVRR------QAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEG 304 (377)
T ss_dssp EESTTCSSHHHHHHHHHH------TCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCEECCS
T ss_pred EECCccCCHHHHHHHHHc------CCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecCCCCCc
Confidence 344566777777666653 24566776655431000013467889999999876554443
No 156
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=23.40 E-value=67 Score=24.00 Aligned_cols=60 Identities=5% Similarity=-0.150 Sum_probs=37.5
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.++
T Consensus 262 a~dE~~~~~~~~~~~~~~------~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 321 (391)
T 4e8g_A 262 YLDESGEDLSTVIRAAGQ------GLCDGFGMKLTRIGGLQQMAAFRDICEARALPHSCDDAWGGD 321 (391)
T ss_dssp EESTTCCSHHHHHHHHHT------TCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCCEEEECSSCSH
T ss_pred EeCCCCCCHHHHHHHHHc------CCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEeCCcCCCH
Confidence 455677777777776653 245677776554311000134678999999999887666554
No 157
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=23.37 E-value=2.4e+02 Score=24.24 Aligned_cols=69 Identities=13% Similarity=0.084 Sum_probs=47.0
Q ss_pred hHHHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCC-ceEecccccccccchhhccHHHHHHHhCCeeeeeccccc
Q psy5380 2 NHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCAT-PIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISM 76 (129)
Q Consensus 2 ~~l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~-~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~ 76 (129)
+.|.+.+..-++++..|+...+..+.+.+...|..+ -...|.-|.+-+. +-....+.|..+..|.|.+.
T Consensus 364 ~~ll~~~~~~~~~~ATHN~~si~~a~~l~~~~g~~~~~~eFq~L~GM~d~------l~~~L~~~g~~vr~YvP~G~ 433 (1026)
T 4f9i_A 364 RKILENHQICHFACASHNIRTISAVMEMARELNVPEDRYEFQVLYGMAEP------VRKGILKVAGRIRLYAPYGN 433 (1026)
T ss_dssp HHHHHTTTTEEEEEECCCHHHHHHHHHHHHHTTCCGGGEEEEEETTSCHH------HHHHHHHHTCCEEEEEEESC
T ss_pred HHHHhCCCCcCceEeCCCHHHHHHHHHHHHHcCCCCCcEEEEcCCCCCHH------HHHHHHhcCCCEEEEEEecc
Confidence 345566666799999999999999999998888632 2345555666432 22233446877777777763
No 158
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=23.31 E-value=45 Score=22.80 Aligned_cols=18 Identities=17% Similarity=0.150 Sum_probs=11.2
Q ss_pred cHHHHHHHhCCeeeeecc
Q psy5380 56 YMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 56 ~~~~~~~~~gi~~~~~sp 73 (129)
++.+.++++|+.+....|
T Consensus 55 ~~~~~l~~~gl~i~~~~~ 72 (264)
T 1yx1_A 55 ALTAAIQLQGLECVFSSP 72 (264)
T ss_dssp HHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHcCCEEEEecc
Confidence 456667777776655444
No 159
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=23.17 E-value=65 Score=14.63 Aligned_cols=17 Identities=35% Similarity=0.718 Sum_probs=9.4
Q ss_pred EecCCCHHHHHHHHHHH
Q psy5380 14 GTSRWSPVEIMEAYSNC 30 (129)
Q Consensus 14 G~Sn~~~~~~~~~~~~~ 30 (129)
|+..|+..++++.++.+
T Consensus 5 gvtrfdekqieelldnc 21 (31)
T 4h62_V 5 GVTRFDEKQIEELLDNC 21 (31)
T ss_dssp -----CHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHH
Confidence 67788888888887654
No 160
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=22.48 E-value=1e+02 Score=21.07 Aligned_cols=67 Identities=6% Similarity=-0.050 Sum_probs=37.1
Q ss_pred HHHcCCccEEEecCCCHHHHHHHHHHHHhcCCCCceEecc----------cccccccch----hhccHHHHHHHhCCeee
Q psy5380 4 AINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQT----------EYHMFCRDK----AELYMPELYNKIGVGMM 69 (129)
Q Consensus 4 l~~~G~ir~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~----------~~~l~~~~~----~e~~~~~~~~~~gi~~~ 69 (129)
+.+.|....+=+|.|+...+.++.+.... .+...+-. .+..++... ...++++.+++.|+.+.
T Consensus 124 l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~v~ 200 (238)
T 3no3_A 124 VKRMKLAKRTDYISFNMDACKEFIRLCPK---SEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSN 200 (238)
T ss_dssp HHHTTCGGGEEEEESCHHHHHHHHHHCTT---SCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTCEEE
T ss_pred HHHcCCcCCEEEEECCHHHHHHHHHHCCC---CeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHCCCEEE
Confidence 34456666777888999988888776421 11111110 011011100 02356778888899888
Q ss_pred eecc
Q psy5380 70 AWSP 73 (129)
Q Consensus 70 ~~sp 73 (129)
+|.+
T Consensus 201 ~WTV 204 (238)
T 3no3_A 201 VWTV 204 (238)
T ss_dssp EECC
T ss_pred EECC
Confidence 8853
No 161
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=21.94 E-value=78 Score=23.52 Aligned_cols=60 Identities=7% Similarity=-0.035 Sum_probs=34.2
Q ss_pred EEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 12 YWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 12 ~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
..|-|-++.+++.++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+.+.++
T Consensus 243 a~dE~~~~~~~~~~~i~~------~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 243 VADESVFDAKDAERVIDE------QACNMINIKLAKTGGILEAQKIKKLADSAGISCMVGCMMESP 302 (379)
T ss_dssp EESTTCSSHHHHHHHHHT------TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCH
T ss_pred EeCCccCCHHHHHHHHHc------CCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeCCCccH
Confidence 444566666666655542 234556655444210000134678999999999887766544
No 162
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=21.82 E-value=67 Score=23.51 Aligned_cols=69 Identities=4% Similarity=-0.033 Sum_probs=41.2
Q ss_pred HHHHcCCc-cEEEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 3 HAINQGWI-MYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 3 ~l~~~G~i-r~iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
+|+++-.| -..|=|-++.+.+.++.+. ...+++|...+.+-=-..-..+...|+.+|+.++.-+.+.++
T Consensus 233 ~l~~~~~ipIa~dE~~~~~~~~~~~~~~------~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 233 RLSDNNRVAIMADESLSTLASAFDLARD------RSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHCSSEEEESSSCCSHHHHHHHHTT------TCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCH
T ss_pred HHhhhccCCccCCccCCCHHHHHHHHHc------CCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccH
Confidence 34444333 3556677787777776643 246677776654310000134678899999998876666554
No 163
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=21.77 E-value=84 Score=23.79 Aligned_cols=59 Identities=7% Similarity=-0.105 Sum_probs=34.5
Q ss_pred cEEEecCCCH----HHHHHHHHHHHhcCCCC-ceEeccc-c--cccccchhhccHHHHHHHhCCeeeee
Q psy5380 11 MYWGTSRWSP----VEIMEAYSNCRQFNCAT-PIIEQTE-Y--HMFCRDKAELYMPELYNKIGVGMMAW 71 (129)
Q Consensus 11 r~iG~Sn~~~----~~~~~~~~~~~~~g~~~-~~~~q~~-~--~l~~~~~~e~~~~~~~~~~gi~~~~~ 71 (129)
+-+|+|-|.- ++..+.++.+.++|... |.+++.+ = .-.... -.++..+|++.|+.+++=
T Consensus 27 ~~LGiSvYp~~~~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~--~~~l~~~a~~~g~~vi~D 93 (385)
T 1x7f_A 27 RKLGISLYPEHSTKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAE--FKEIINHAKDNNMEVILD 93 (385)
T ss_dssp CEEEEEECGGGSCHHHHHHHHHHHHTTTEEEEEEEECCC--------HH--HHHHHHHHHHTTCEEEEE
T ss_pred HheEEEEcCCCCCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHH--HHHHHHHHHHCCCEEEEE
Confidence 3489998854 35556677777777433 3344432 0 000011 235789999999998863
No 164
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=21.73 E-value=85 Score=15.61 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=15.4
Q ss_pred HHHHHHHHHHhhCCCCcchh
Q psy5380 104 AVMGEVERVLDNKPARPPMV 123 (129)
Q Consensus 104 ~~~~~l~~la~~~~~~~~~l 123 (129)
++.+.++.+-++.|++.+..
T Consensus 17 E~~eLvk~leekfGVsaaa~ 36 (40)
T 1dd4_C 17 ELAELVKKLEDKFGVTAAAP 36 (40)
T ss_dssp HHHHHHHHHHHHTCCCSCC-
T ss_pred HHHHHHHHHHHHHCCCcccc
Confidence 67788889999999986543
No 165
>1mnt_A MNT repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=21.67 E-value=46 Score=18.96 Aligned_cols=29 Identities=3% Similarity=-0.144 Sum_probs=21.5
Q ss_pred cccCHHHHHHHHHHHhhCCCCcchhhhcc
Q psy5380 99 PKLNAAVMGEVERVLDNKPARPPMVSTLA 127 (129)
Q Consensus 99 ~~~~~~~~~~l~~la~~~~~~~~~la~~A 127 (129)
-++++++.+++...|...|.+..+....+
T Consensus 9 lRi~~eLh~~L~~~A~~~grSlN~~I~~~ 37 (76)
T 1mnt_A 9 FRMPMEVREKLKFRAEANGRSMNSELLQI 37 (76)
T ss_dssp EECCHHHHHHHHHTHHHHTSCTHHHHHHH
T ss_pred eeCCHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 35678899999999998888766554443
No 166
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=21.66 E-value=2.6e+02 Score=22.40 Aligned_cols=57 Identities=11% Similarity=0.178 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCCceEecccccccccchh---------hccHHHHHHHhCCeeeee-ccc
Q psy5380 17 RWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKA---------ELYMPELYNKIGVGMMAW-SPI 74 (129)
Q Consensus 17 n~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~---------e~~~~~~~~~~gi~~~~~-spL 74 (129)
-++++.+++..+..++.|+ ..+..-+.||..++.+- -+.+++.|+++|+-++.. .|.
T Consensus 28 r~p~~~W~d~l~kmKa~G~-NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpGPY 94 (595)
T 4e8d_A 28 RVPPEDWYHSLYNLKALGF-NTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPSPF 94 (595)
T ss_dssp GSCGGGHHHHHHHHHHTTC-CEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCSC
T ss_pred hCCHHHHHHHHHHHHHcCC-CEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEecCCc
Confidence 3566777777777777774 44555667888776531 135789999999999887 444
No 167
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=21.62 E-value=1.3e+02 Score=21.90 Aligned_cols=55 Identities=7% Similarity=-0.059 Sum_probs=32.2
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 13 WGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 13 iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
.|=|-++.+++.++.+. ...+++|+..+.+---..-..+...|+++|+.++.-+-
T Consensus 244 ~dE~~~~~~~~~~~i~~------~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 298 (375)
T 1r0m_A 244 LDESVASASDARKALAL------GAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGM 298 (375)
T ss_dssp ESTTCCSHHHHHHHHHH------TSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred ecCccCCHHHHHHHHHh------CCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCc
Confidence 34456677777777654 34667777655431100013567889999998655443
No 168
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=21.50 E-value=1.1e+02 Score=21.98 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=39.9
Q ss_pred hHHHHcCC-ccEEEe------cCCCHHHHHHHHHHHHhcCCCCceEecccccccccch-hhccHHHHHHHhC--Ceeeee
Q psy5380 2 NHAINQGW-IMYWGT------SRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDK-AELYMPELYNKIG--VGMMAW 71 (129)
Q Consensus 2 ~~l~~~G~-ir~iG~------Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~-~e~~~~~~~~~~g--i~~~~~ 71 (129)
..|+++|. |-.||+ .+.+...+.+.++.....|+.++.+-++..+ ..+. .-..+++.|.++. ++++.|
T Consensus 191 ~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G~~pi~iTEldi~--~~qa~~y~~~~~~~~~~~~v~git~W 268 (303)
T 1ta3_B 191 KKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSSLANTGVSEVAITELDIA--GAASSDYLNLLNACLNEQKCVGITVW 268 (303)
T ss_dssp HHHHHTTCCCCEEEECCEECTTCCCGGGHHHHHHHHHTTCCSEEEEEEEEET--TCCHHHHHHHHHHHHTCTTEEEEEES
T ss_pred HHHHHCCCCcceEEEeeecCCCCCCHHHHHHHHHHHHHCCCCeEEEeeCCcC--hhHHHHHHHHHHHHHhCCCceEEEEe
Confidence 35677886 888887 2223367777777666666323333333332 1221 1124678888875 677777
Q ss_pred ccc
Q psy5380 72 SPI 74 (129)
Q Consensus 72 spL 74 (129)
..-
T Consensus 269 g~~ 271 (303)
T 1ta3_B 269 GVS 271 (303)
T ss_dssp CSB
T ss_pred cCC
Confidence 643
No 169
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=21.45 E-value=1e+02 Score=22.88 Aligned_cols=56 Identities=4% Similarity=-0.151 Sum_probs=33.0
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccc
Q psy5380 14 GTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPIS 75 (129)
Q Consensus 14 G~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~ 75 (129)
|=|-++.+.++++.+. ...+++|+..+.+---..-..+...|+.+|+.++.-+-+.
T Consensus 246 dE~~~~~~~~~~~i~~------~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 301 (397)
T 2qde_A 246 DESAQELHDLLAIINK------GAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGCMVG 301 (397)
T ss_dssp STTCCSHHHHHHHHHH------TCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSC
T ss_pred eCCcCCHHHHHHHHHc------CCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEecCcc
Confidence 3355667777666653 2456666665542110001346788999999988875433
No 170
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=21.35 E-value=1.4e+02 Score=21.90 Aligned_cols=53 Identities=4% Similarity=-0.197 Sum_probs=28.1
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeeccc
Q psy5380 16 SRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPI 74 (129)
Q Consensus 16 Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL 74 (129)
+-++++.++++.+. ...+.+|+..+.+---..-..+...|+++|+.++.-+-+
T Consensus 245 ~i~~~~~~~~~i~~------~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 297 (379)
T 2rdx_A 245 CVTGLHMAQRIVAD------RGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAEDSW 297 (379)
T ss_dssp TCCSHHHHHHHHHH------TCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEECSB
T ss_pred CcCCHHHHHHHHHc------CCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEeecc
Confidence 44566666666543 235566665544211000124566788888877776433
No 171
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=20.94 E-value=1.5e+02 Score=21.22 Aligned_cols=61 Identities=7% Similarity=-0.047 Sum_probs=34.2
Q ss_pred CccEEEec---CCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecc
Q psy5380 9 WIMYWGTS---RWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSP 73 (129)
Q Consensus 9 ~ir~iG~S---n~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~sp 73 (129)
+++.+-+. ..+++.++++.+.- + .+.+++....|+.-.-..-+++.+.|+++|+-++.=..
T Consensus 111 ~~~~v~~~~~~~~d~~~l~~~i~~~---~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a 174 (416)
T 3isl_A 111 NVHMLECEWGTVFDPEDIIREIKKV---K-PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAV 174 (416)
T ss_dssp EEEEEECCTTCCCCHHHHHHHHHHH---C-CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECT
T ss_pred eeEEEecCCCCCCCHHHHHHHHhhC---C-CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECC
Confidence 34555443 23677777766421 2 45565555444422111134688999999998875433
No 172
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.81 E-value=91 Score=25.03 Aligned_cols=53 Identities=8% Similarity=0.048 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHhcCCCCceEecccccccccchh---------hccHHHHHHHhCCeeeeec
Q psy5380 19 SPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKA---------ELYMPELYNKIGVGMMAWS 72 (129)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~---------e~~~~~~~~~~gi~~~~~s 72 (129)
+.+.+++-++..++.|+ ..+-.-+.||..++.+- -+.+++.|+++|+-++..-
T Consensus 35 ~~e~w~~dl~~mK~~G~-N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~ 96 (612)
T 3d3a_A 35 PKEYWEHRIKMCKALGM-NTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRP 96 (612)
T ss_dssp CGGGHHHHHHHHHHHTC-CEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHcCC-CEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEec
Confidence 45677777777887784 44445555777766531 0345899999999999873
No 173
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=20.64 E-value=1.4e+02 Score=21.80 Aligned_cols=56 Identities=16% Similarity=0.172 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHhcCCCCceEecccccccccc--hhhccHHHHHHHhCCeeeeecccccc
Q psy5380 19 SPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRD--KAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~--~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
+...+....+.+...|. ++.+ .+|...+.+ ...+.+++++++++|+.+.|+=-+.|
T Consensus 220 ~~~~~~~~~~~~~~~g~-Pv~i--gEfG~~~~~~~~~~~~~l~~~~~~~i~w~~W~~~~~~ 277 (345)
T 3jug_A 220 DANTVRSNIDRVIDQDL-ALVI--GEFGHRHTDGDVDEDTILSYSEETGTGWLAWSWKGNS 277 (345)
T ss_dssp SHHHHHHHHHHHHTTTC-CEEE--EEECCCCCC--CCHHHHHHHHHHHTCEEEESCSSCCC
T ss_pred CHHHHHHHHHHHHHcCC-cEEE--ECcCCCCCCCCHHHHHHHHHHHHcCCEEEEEEEECCC
Confidence 45666666666666663 3222 222222211 11357899999999999999754444
No 174
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=20.11 E-value=97 Score=22.91 Aligned_cols=59 Identities=5% Similarity=-0.060 Sum_probs=36.2
Q ss_pred EEecCCCHHHHHHHHHHHHhcCCCCceEecccccccccchhhccHHHHHHHhCCeeeeecccccc
Q psy5380 13 WGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMA 77 (129)
Q Consensus 13 iG~Sn~~~~~~~~~~~~~~~~g~~~~~~~q~~~~l~~~~~~e~~~~~~~~~~gi~~~~~spL~~G 77 (129)
.|=|-++.+++.++.+. ...+.+|+..+.+---..-..+...|+.+|+.++.-+.+.++
T Consensus 242 ~dE~~~~~~~~~~~l~~------~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~~~es~ 300 (378)
T 3eez_A 242 VDECLVTLQDAARVARD------GLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMATGGSV 300 (378)
T ss_dssp ECTTCCSHHHHHHHHHT------TCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCSH
T ss_pred ECCCCCCHHHHHHHHHc------CCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCCCCCCH
Confidence 44566777777776653 246677776554311001235678999999999876655444
Done!