BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy5385
         (180 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9SMJ4|LEG_CICAR Legumin OS=Cicer arietinum GN=leg3 PE=1 SV=1
          Length = 496

 Score = 32.3 bits (72), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 61  QTECLIVLVPNGNKLKSIKPNIEKWPSSNRKNRLEEVVLTRMRIGHTRLTHSYLFTRSPQ 120
           Q E L  L P+ N++KS    IE W  SN++     V L+R  +    L  ++L  RSP+
Sbjct: 32  QLEHLNALKPD-NRIKSEGGLIETWNPSNKQFACAGVALSRATLQPNSLLQTFLHQRSPE 90

Query: 121 PTCRCGD 127
              + G+
Sbjct: 91  IFIQQGN 97


>sp|Q59MW2|DBP6_CANAL ATP-dependent RNA helicase DBP6 OS=Candida albicans (strain SC5314
           / ATCC MYA-2876) GN=DBP6 PE=3 SV=1
          Length = 606

 Score = 32.3 bits (72), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 36/64 (56%)

Query: 91  KNRLEEVVLTRMRIGHTRLTHSYLFTRSPQPTCRCGDILTTVKHILTCPLDIQLRSSLPN 150
           KN L+ ++LT+  I   +L++  +FT+S + + R  ++L ++   L+  L I   +S  N
Sbjct: 423 KNSLKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELLISLFQKLSINLKIAFINSTNN 482

Query: 151 PPSL 154
             S+
Sbjct: 483 RTSI 486


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.131    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,258,244
Number of Sequences: 539616
Number of extensions: 2436568
Number of successful extensions: 4830
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4827
Number of HSP's gapped (non-prelim): 5
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)