BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5386
(287 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3E4U|A Chain A, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|B Chain B, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|C Chain C, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|D Chain D, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|E Chain E, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|F Chain F, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
Length = 130
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 13 MGSEHYCLRWNNHQNNLLGVFSQLLHDESLVDVTLACSEGHSIRAHKVVLSACSSYFQSL 72
+GS C+++ H +++L ++L + L DV + S RAHK VL ACS F S+
Sbjct: 3 LGSADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSR-EQFRAHKTVLMACSGLFYSI 61
Query: 73 FIDHPSRHPIVILKD-------VCFSELRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVK 125
F D + VI D C L++FMY +N+ + ++ TA L+++
Sbjct: 62 FTDQLKCNLSVINLDPEINPEGFC-----ILLDFMYTSRLNLREGNIMAVMATAMYLQME 116
Query: 126 GLAE 129
+ +
Sbjct: 117 HVVD 120
>pdb|1R28|A Chain A, Crystal Structure Of The B-Cell Lymphoma 6 (Bcl6) Btb
Domain To 2.2 Angstrom
pdb|1R28|B Chain B, Crystal Structure Of The B-Cell Lymphoma 6 (Bcl6) Btb
Domain To 2.2 Angstrom
pdb|1R29|A Chain A, Crystal Structure Of The B-cell Lymphoma 6 (bcl6) Btb
Domain To 1.3 Angstrom
pdb|1R2B|A Chain A, Crystal Structure Of The Bcl6 Btb Domain Complexed With A
Smrt Co-Repressor Peptide
pdb|1R2B|B Chain B, Crystal Structure Of The Bcl6 Btb Domain Complexed With A
Smrt Co-Repressor Peptide
pdb|3BIM|A Chain A, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|B Chain B, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|C Chain C, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|D Chain D, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|E Chain E, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|F Chain F, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|G Chain G, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|H Chain H, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3LBZ|A Chain A, Crystal Structure Of The Bcl6 Btb Domain Complexed With
The Molecule Inhibitor 79-6
pdb|3LBZ|B Chain B, Crystal Structure Of The Bcl6 Btb Domain Complexed With
The Molecule Inhibitor 79-6
Length = 127
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 14 GSEHYCLRWNNHQNNLLGVFSQLLHDESLVDVTLACSEGHSIRAHKVVLSACSSYFQSLF 73
GS +++ H +++L ++L + L DV + S RAHK VL ACS F S+F
Sbjct: 1 GSADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSR-EQFRAHKTVLMACSGLFYSIF 59
Query: 74 IDHPSRHPIVILKD--VCFSELRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVKGLAE 129
D R+ VI D + L++FMY +N+ + ++ TA L+++ + +
Sbjct: 60 TDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVD 117
>pdb|2Z8H|A Chain A, Structure Of Mouse Bach1 Btb Domain
Length = 138
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 25 HQNNLLGVFSQLLHDESLVDVTLACSEGHSIRAHKVVLSACSSYFQSLFIDHPSRHPIVI 84
H N+L + + L DVT+ EG RAH+ VL+ACSSYF S + V
Sbjct: 19 HSTNVLLSLNDQRKKDVLCDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTDAELTVT 77
Query: 85 L-KDVCFSELRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVKGLAE 129
L ++V LI+F Y ++ + + + + E L V + E
Sbjct: 78 LPEEVTVKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEE 123
>pdb|2NN2|A Chain A, Crystal Structure Of The Btb Domain From The LrfZBTB7
Transcriptional Regulator
pdb|2NN2|B Chain B, Crystal Structure Of The Btb Domain From The LrfZBTB7
Transcriptional Regulator
Length = 133
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 22 WNNHQNNLLGVFSQLLHDESLVDVTLACSEGHSIRAHKVVLSACSSYFQSLF-----IDH 76
+ +H +++L ++ L DV + EG H+ VL+ACS YF+ LF +D
Sbjct: 15 FPDHSSDILSGLNEQRTQGLLCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSGAVVDQ 73
Query: 77 PSRHPIVILKDVCFSELRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVKGLAEMTQDLST 136
+ + I V L L++F Y + V + +L A L++ ++ + DL
Sbjct: 74 QNVYEI---DFVSAEALTALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLLD 130
Query: 137 R 137
R
Sbjct: 131 R 131
>pdb|2Q81|A Chain A, Crystal Structure Of The Miz-1 BtbPOZ DOMAIN
pdb|2Q81|B Chain B, Crystal Structure Of The Miz-1 BtbPOZ DOMAIN
pdb|2Q81|C Chain C, Crystal Structure Of The Miz-1 BtbPOZ DOMAIN
pdb|2Q81|D Chain D, Crystal Structure Of The Miz-1 BtbPOZ DOMAIN
Length = 119
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 7 LGRDTDMGSEHYCLRWNNHQNNLLGVFSQLLHDESLVDVTLACSEGHSIRAHKVVLSACS 66
LG D S+H + N Q LG+ L D T +G +AHK VL+ACS
Sbjct: 3 LGSDFPQHSQHVLEQLN--QQRQLGL---------LCDCTFVV-DGVHFKAHKAVLAACS 50
Query: 67 SYFQSLFIDHPSRHPIVILKDVCFSELRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVKG 126
YF+ LF+D + +V L + L ++EFMY ++++ + +L A L+++
Sbjct: 51 EYFKMLFVD---QKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQD 107
Query: 127 L 127
+
Sbjct: 108 I 108
>pdb|3GA1|A Chain A, Crystal Structure Of The Human Nac1 Poz Domain
pdb|3GA1|B Chain B, Crystal Structure Of The Human Nac1 Poz Domain
Length = 129
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 44 DVTLACSEGHSIRAHKVVLSACSSYFQSLFIDHPSRHPIVIL-KDVCFSELRTLIEFMYR 102
DV++ +GH+ +AH+ VL+A SSYF+ LF + SR +V L V + ++ F Y
Sbjct: 35 DVSVVV-KGHAFKAHRAVLAASSSYFRDLF--NNSRSAVVELPAAVQPQSFQQILSFCYT 91
Query: 103 GEVNVEYCQLSTLLKTAESLKVKGLAE 129
G +++ L+ TA L+++ + E
Sbjct: 92 GRLSMNVGDQDLLMYTAGFLQIQEIME 118
>pdb|2IHC|A Chain A, Crystal Structure Of The Bric-A-Brac (Btb) Domain Of Human
Bach1
pdb|2IHC|B Chain B, Crystal Structure Of The Bric-A-Brac (Btb) Domain Of Human
Bach1
pdb|2IHC|C Chain C, Crystal Structure Of The Bric-A-Brac (Btb) Domain Of Human
Bach1
pdb|2IHC|D Chain D, Crystal Structure Of The Bric-A-Brac (Btb) Domain Of Human
Bach1
Length = 124
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 25 HQNNLLGVFSQLLHDESLVDVTLACSEGHSIRAHKVVLSACSSYFQSLFIDHPSRHPIVI 84
H N+L + + L DVT+ EG RAH+ VL+ACSSYF S + +
Sbjct: 12 HSTNVLLSLNDQRKKDVLCDVTIF-VEGQRFRAHRSVLAACSSYFHSRIVGQADGELNIT 70
Query: 85 L-KDVCFSELRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVKGLAE 129
L ++V LI+F Y ++ + + + K E L V + E
Sbjct: 71 LPEEVTVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEE 116
>pdb|3M52|A Chain A, Crystal Structure Of The Btb Domain From The Miz-1ZBTB17
Transcription Regulator
pdb|3M52|B Chain B, Crystal Structure Of The Btb Domain From The Miz-1ZBTB17
Transcription Regulator
Length = 117
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 42 LVDVTLACSEGHSIRAHKVVLSACSSYFQSLFIDHPSRHPIVILKDVCFSELRTLIEFMY 101
L D T +G +AHK VL+ACS YF+ LF+D + +V L + L ++EFMY
Sbjct: 25 LCDCTFV-VDGVHFKAHKAVLAACSEYFKMLFVD---QKDVVHLDISNAAGLGQVLEFMY 80
Query: 102 RGEVNVEYCQLSTLLKTAESLKVKGL 127
++++ + +L A L+++ +
Sbjct: 81 TAKLSLSPENVDDVLAVATFLQMQDI 106
>pdb|3OHU|A Chain A, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|B Chain B, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|C Chain C, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|D Chain D, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|E Chain E, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|F Chain F, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHV|A Chain A, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|B Chain B, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|C Chain C, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|D Chain D, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|E Chain E, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|F Chain F, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
Length = 125
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 13 MGSEHYCLRWNNHQNNLLGVFSQLLHDESLVDVTLACSEGHSIRAHKVVLSACSSYFQSL 72
+GS Y H N+L + + L DVTL E RAH+ VL+ACS YF
Sbjct: 3 LGSPMYVYESTVHCTNILLGLNDQRKKDILCDVTLI-VERKEFRAHRAVLAACSEYFWQA 61
Query: 73 FIDHPSRHPIVIL-KDVCFSELRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVKGLAE 129
+ +V L ++V L++F Y ++ + + +++ AE L++ L +
Sbjct: 62 LVGQTKNDLVVSLPEEVTARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLED 119
>pdb|2IF5|A Chain A, Structure Of The Poz Domain Of Human Lrf, A Master
Regulator Of Oncogenesis
Length = 120
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 24 NHQNNLLGVFSQLLHDESLVDVTLACSEGHSIRAHKVVLSACSSYFQSLF-----IDHPS 78
+H +++L ++ L DV + EG H+ VL+ACS YF+ LF +D +
Sbjct: 7 DHSSDILSGLNEQRTQGLLCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSGAVVDQQN 65
Query: 79 RHPIVILKDVCFSELRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVKGLAEMTQDL 134
+ I V L L++F Y + V + +L A L++ ++ + DL
Sbjct: 66 VYEI---DFVSAEALTALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADL 118
>pdb|3M8V|A Chain A, Crystal Structure Of The Btb Domain From KaisoZBTB33, FORM
II
pdb|3M4T|A Chain A, Crystal Structure Of The Btb Domain From KaisoZBTB33, FORM
I
Length = 124
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 44 DVTLACSEGHSIRAHKVVLSACSSYFQSLFIDHPSRHPIVILKDVCFSELRTLIEFMYRG 103
DVT+ E RAHK +LSA S+YF LF + ++ F+E ++ ++Y
Sbjct: 35 DVTVIV-EDRKFRAHKNILSASSTYFHQLFSVAGQVVELSFIRAEIFAE---ILNYIYSS 90
Query: 104 E-VNVEYCQLSTLLKTAESLKVKGLAEMTQDLS 135
+ V V L L+K+ + L VK +AE+ LS
Sbjct: 91 KIVRVRSDLLDELIKSGQLLGVKFIAELGVPLS 123
>pdb|3FKC|A Chain A, Crystal Structure Of Human Zinc Finger And Btb Domain
Containing 33
Length = 116
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 44 DVTLACSEGHSIRAHKVVLSACSSYFQSLFIDHPSRHPIVILKDVCFSELRTLIEFMYRG 103
DVT+ E RAHK +LSA S+YF LF + ++ F+E ++ ++Y
Sbjct: 33 DVTVIV-EDRKFRAHKNILSASSTYFHQLFSVAGQVVELSFIRAEIFAE---ILNYIYSS 88
Query: 104 E-VNVEYCQLSTLLKTAESLKVKGLAEM 130
+ V V L L+K+ + L VK +A +
Sbjct: 89 KIVRVRSDLLDELIKSGQLLGVKFIAAL 116
>pdb|2VPK|A Chain A, Crystal Structure Of The Btb Domain Of Human Myoneurin
Length = 116
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 42 LVDVTLACSEGHSIRAHKVVLSACSSYFQSLFIDHPSRHPIVILKDVCFSELRTLIEFMY 101
L D T+ E +AH+ VL++ S YF +++ + + V + L+EF+Y
Sbjct: 22 LCDCTIVIGE-FQFKAHRNVLASFSEYFGAIYRSTSENNVFLDQSQVKADGFQKLLEFIY 80
Query: 102 RGEVNVEYCQLSTLLKTAESLKVK 125
G +N++ + + + A+ LKV+
Sbjct: 81 TGTLNLDSWNVKEIHQAADYLKVE 104
>pdb|3B84|A Chain A, Crystal Structure Of The Human Btb Domain Of The Krueppel
Related Zinc Finger Protein 3 (Hkr3)
Length = 119
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 52 GHSIRAHKVVLSACSSYFQSLFIDHPSRHPIVILKDVCFSEL-RTLIEFMYRGEVNVEYC 110
G +AH VL+ CS +FQSL+ D ++ F+E+ L++F Y G + +
Sbjct: 33 GLVFKAHWSVLACCSHFFQSLYGDGSGGSVVL---PAGFAEIFGLLLDFFYTGHLALTSG 89
Query: 111 QLSTLLKTAESLKVKGLAEMTQDLSTRS 138
+L A L+V E+ Q ++
Sbjct: 90 NRDQVLLAARELRVPEAVELCQSFKPKT 117
>pdb|2YY9|A Chain A, Crystal Structure Of Btb Domain From Mouse Hkr3
pdb|2YY9|B Chain B, Crystal Structure Of Btb Domain From Mouse Hkr3
Length = 135
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 44 DVTLACSEGHSIRAHKVVLSACSSYFQSLFIDHPSRHPIVILKDVCFSEL-RTLIEFMYR 102
D TL G +AH VL+ CS +FQ ++ D ++ F+E+ L++F Y
Sbjct: 27 DATLDVG-GLVFKAHWSVLACCSHFFQRIYGDGTGGSVVL---PAGFAEIFGLLLDFFYT 82
Query: 103 GEVNVEYCQLSTLLKTAESLKVKGLAEMTQDL 134
G + + +L A+ L+V E+ Q
Sbjct: 83 GHLALTSGNRDQVLLAAKELRVPEAVELCQSF 114
>pdb|4AP2|A Chain A, Crystal Structure Of The Human Klhl11-cul3 Complex At 2.8a
Resolution
pdb|4APF|A Chain A, Crystal Structure Of The Human Klhl11-cul3 Complex At 3.1a
Resolution
Length = 297
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 20 LRWNNHQNNLLGVFSQLLHDESLVDVTLAC--SEGHSIRAHKVVLSACSSYFQSLFIDH- 76
L W ++ G+F D+TL + G RAH+ VL+A + YF L
Sbjct: 37 LSWRQNEQRRQGLF---------CDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQF 87
Query: 77 -PSRHPIVILKDVCFSE-------LRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVKGLA 128
SR V ++ SE + +IE+MY G + V + +L+ A+ + L
Sbjct: 88 SESRSGRVEMRKWS-SEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLK 146
Query: 129 EMTQDL 134
E +
Sbjct: 147 EFCGEF 152
>pdb|3I3N|A Chain A, Crystal Structure Of The Btb-Back Domains Of Human Klhl11
pdb|3I3N|B Chain B, Crystal Structure Of The Btb-Back Domains Of Human Klhl11
Length = 279
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 20 LRWNNHQNNLLGVFSQLLHDESLVDVTLAC--SEGHSIRAHKVVLSACSSYFQSLFIDHP 77
L W ++ G+F D+TL + G RAH+ VL+A + YF L
Sbjct: 19 LSWRQNEQRRQGLF---------CDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQF 69
Query: 78 SRHPIVILKDVCFSE--------LRTLIEFMYRGEVNVEYCQLSTLLKTAESLKVKGLAE 129
S ++ +S + +IE+ Y G + V + +L+ A+ + L E
Sbjct: 70 SESRSGRVEXRKWSSEPGPEPDTVEAVIEYXYTGRIRVSTGSVHEVLELADRFLLIRLKE 129
Query: 130 MTQDL 134
+
Sbjct: 130 FCGEF 134
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.130 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,204,192
Number of Sequences: 62578
Number of extensions: 246178
Number of successful extensions: 517
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 502
Number of HSP's gapped (non-prelim): 18
length of query: 287
length of database: 14,973,337
effective HSP length: 98
effective length of query: 189
effective length of database: 8,840,693
effective search space: 1670890977
effective search space used: 1670890977
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)