BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy539
(70 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86I22|FAHD1_DICDI Acylpyruvase FAHD1, mitochondrial OS=Dictyostelium discoideum
GN=fahd1 PE=3 SV=1
Length = 218
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 32/41 (78%)
Query: 25 DGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+ S++HHEVE+GI+I ++ + ++ A++ ++GY LALD+T
Sbjct: 56 ESSDIHHEVELGIVIGKKGRDIDLKSAMDYVSGYTLALDMT 96
>sp|P34673|YO23_CAEEL Uncharacterized protein ZK688.3 OS=Caenorhabditis elegans
GN=ZK688.3 PE=3 SV=1
Length = 214
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 6 YIDNVNSMTLARDHHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
++ VNS + + +H EVE+G++IS++ ++++ DA++ I GY +ALD+T
Sbjct: 39 FVKTVNSFIVEGEPIVAPPGCQNLHQEVELGVVISKKASRISKSDAMDYIGGYTVALDMT 98
>sp|Q2HJ98|FAHD1_BOVIN Acylpyruvase FAHD1, mitochondrial OS=Bos taurus GN=FAHD1 PE=2 SV=1
Length = 221
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 28/37 (75%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+HHE+E+ +++ +RC+ V+ A++ +AGY L LD+T
Sbjct: 65 LHHELELAVVMGKRCRAVSEAAAMDYVAGYALCLDMT 101
>sp|Q6P587|FAHD1_HUMAN Acylpyruvase FAHD1, mitochondrial OS=Homo sapiens GN=FAHD1 PE=1
SV=2
Length = 224
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+HHE+E+G+++ +RC+ V A++ + GY L LD+T
Sbjct: 68 LHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMT 104
>sp|Q5RDW0|FAHD1_PONAB Acylpyruvase FAHD1, mitochondrial OS=Pongo abelii GN=FAHD1 PE=2
SV=1
Length = 224
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+HHE+E+G+++ +RC+ V A++ + GY L LD+T
Sbjct: 68 LHHELELGVVMGRRCRAVPEAAAMDYVGGYALCLDMT 104
>sp|B4EKX6|UGL_BURCJ Ureidoglycolate lyase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=BceJ2315_61450 PE=3 SV=1
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 32 EVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
EVE+G++I +CK V+ AL+ +AGYC+ D++E
Sbjct: 124 EVELGVVIGAKCKDVDEARALDYVAGYCVVNDVSE 158
>sp|A0B3M8|UGL_BURCH Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain HI2424)
GN=Bcen2424_5521 PE=3 SV=1
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 32 EVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
EVE+G++I +CK V+ AL+ +AGYC+ D++E
Sbjct: 124 EVELGVVIGAKCKDVDEARALDYVAGYCVVNDVSE 158
>sp|B1K3Y3|UGL_BURCC Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain MC0-3)
GN=Bcenmc03_4750 PE=3 SV=1
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 32 EVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
EVE+G++I +CK V+ AL+ +AGYC+ D++E
Sbjct: 124 EVELGVVIGAKCKDVDEARALDYVAGYCVVNDVSE 158
>sp|Q1BJJ1|UGL_BURCA Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain AU 1054)
GN=Bcen_5340 PE=3 SV=1
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 32 EVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
EVE+G++I +CK V+ AL+ +AGYC+ D++E
Sbjct: 124 EVELGVVIGAKCKDVDEARALDYVAGYCVVNDVSE 158
>sp|Q6AYQ8|FAHD1_RAT Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus GN=Fahd1
PE=2 SV=1
Length = 221
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+HHEVE+G+++ +R + V A++ +AGY L LD+T
Sbjct: 65 LHHEVELGVLLGRRGEAVPEAAAMDYVAGYALCLDMT 101
>sp|Q8R0F8|FAHD1_MOUSE Acylpyruvase FAHD1, mitochondrial OS=Mus musculus GN=Fahd1 PE=1
SV=2
Length = 227
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+HHEVE+G+++ +R + + A++ +AGY L LD+T
Sbjct: 71 LHHEVELGVLLGKRGEAIPEAAAMDYVAGYALCLDMT 107
>sp|Q0B628|UGL_BURCM Ureidoglycolate lyase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=Bamb_4846 PE=3 SV=1
Length = 282
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 32 EVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
EVE+G++I CK V+ AL+ +AGYC+ D++E
Sbjct: 124 EVELGVVIGTTCKDVDEARALDYVAGYCVVNDVSE 158
>sp|B1Z1Y2|UGL_BURA4 Ureidoglycolate lyase OS=Burkholderia ambifaria (strain MC40-6)
GN=BamMC406_5393 PE=3 SV=1
Length = 282
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 32 EVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
EVE+G++I CK V+ AL+ +AGYC+ D++E
Sbjct: 124 EVELGVVIGTTCKDVDEARALDYVAGYCVVNDVSE 158
>sp|Q39BA7|UGL_BURS3 Ureidoglycolate lyase OS=Burkholderia sp. (strain 383)
GN=Bcep18194_B0137 PE=1 SV=1
Length = 282
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 32 EVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
EVE+G++I CK V+ AL+ +AGYC+ D++E
Sbjct: 124 EVELGVVIGATCKDVDEARALDYVAGYCVVNDVSE 158
>sp|A9ALD1|UGL_BURM1 Ureidoglycolate lyase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=Bmul_3283 PE=3 SV=1
Length = 282
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 32 EVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
EVE+G++I CK V+ AL+ +AGYC+ D++E
Sbjct: 124 EVELGVVIGAPCKDVDEARALDYVAGYCVVNDVSE 158
>sp|P76004|YCGM_ECOLI Uncharacterized protein YcgM OS=Escherichia coli (strain K12)
GN=ycgM PE=1 SV=1
Length = 219
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 24 ADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+D VHHEVE+ ++I ++ IAGY +ALDLT
Sbjct: 62 SDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDLT 103
>sp|P53889|FMP41_YEAST Uncharacterized mitochondrial hydrolase FMP41 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FMP41 PE=1
SV=1
Length = 259
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 20 HPG---IADGSEVHHEVEMGIIISQRCKKVNRY---DALNCIAGYCLALDLT 65
+PG I G +VHHE+E+ +I+S+ V + + + I+G LALDLT
Sbjct: 72 NPGPIFIPRGVKVHHEIELALIVSKHLSNVTKMKPEEVYDSISGVALALDLT 123
>sp|Q9UYW0|Y1397_PYRAB Uncharacterized protein PYRAB13970 OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=PYRAB13970 PE=3 SV=1
Length = 225
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
V HEVE+ +II +R K V A + I GY + LD+T
Sbjct: 66 VDHEVELAVIIGKRAKNVPAEKAFDYILGYTILLDIT 102
>sp|O58377|Y643_PYRHO Uncharacterized protein PH0643 OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH0643 PE=3 SV=1
Length = 230
Score = 36.2 bits (82), Expect = 0.066, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
V HEVE+ +I+ +R K V A + I GY + LD+T
Sbjct: 71 VDHEVELAVIMGKRAKNVPASKAFDYILGYTIILDIT 107
>sp|Q54BF3|FAHD2_DICDI Fumarylacetoacetate hydrolase domain-containing protein 2 homolog
OS=Dictyostelium discoideum GN=fahd2 PE=3 SV=1
Length = 305
Score = 35.8 bits (81), Expect = 0.069, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 25 DGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+ EV +EVE+ ++I ++ K V+ DAL +AGY + D++
Sbjct: 134 ESDEVDYEVELVVVIGKQAKNVSESDALQYVAGYTVGNDVS 174
>sp|Q59050|Y1656_METJA Uncharacterized protein MJ1656 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1656 PE=3 SV=1
Length = 237
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
V +EVE+ I+I ++CK + + +A + I GY + D+T
Sbjct: 88 VDYEVELAIVIGKKCKNIKKDEANDYIMGYTILNDVT 124
>sp|Q2KIB0|FAHD2_BOVIN Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Bos
taurus GN=FAHD2 PE=2 SV=1
Length = 314
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 25 DGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+ EV EVE+ ++I +R K + DA+ +AG+ +A D++
Sbjct: 152 ESQEVDWEVELAVVIGKRGKYIKATDAMAHVAGFTVAHDVS 192
>sp|B2RYW9|FAHD2_RAT Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus
norvegicus GN=Fahd2 PE=1 SV=1
Length = 313
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 25 DGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+ EV EVEM ++I ++ K + D + +AG+ +A D++
Sbjct: 152 ESKEVDWEVEMAVVIGKKGKHIKATDVMAYVAGFTVAHDVS 192
>sp|Q3TC72|FAHD2_MOUSE Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Mus
musculus GN=Fahd2 PE=1 SV=1
Length = 313
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 25 DGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+ EV EVEM ++I ++ K + D + +AG+ +A D++
Sbjct: 152 ESKEVDWEVEMAVVIGKKGKHIKATDVMAHVAGFTVAHDVS 192
>sp|Q5RCX5|FAHD2_PONAB Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Pongo
abelii GN=FAHD2 PE=2 SV=1
Length = 314
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 28 EVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
EV EVE+ ++I ++ K + DA+ +AG+ +A D++
Sbjct: 155 EVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVS 192
>sp|Q6P2I3|FAH2B_HUMAN Fumarylacetoacetate hydrolase domain-containing protein 2B OS=Homo
sapiens GN=FAHD2B PE=2 SV=1
Length = 314
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 28 EVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
EV EVE+ ++I ++ K + DA+ +AG+ +A D++
Sbjct: 155 EVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVS 192
>sp|Q96GK7|FAH2A_HUMAN Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Homo
sapiens GN=FAHD2A PE=1 SV=1
Length = 314
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 28 EVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
EV EVE+ ++I ++ K + DA+ +AG+ +A D++
Sbjct: 155 EVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVS 192
>sp|P37352|HPCE_ECOLX Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase
OS=Escherichia coli GN=hpcE PE=1 SV=2
Length = 427
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALD 63
+H+E E+ ++I ++ + V+ DA++ +AGY + D
Sbjct: 273 MHYEAELVVVIGKQARNVSEADAMDYVAGYTVCND 307
>sp|Q46978|HPAG_ECOLX 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase OS=Escherichia coli GN=hpaG PE=3
SV=1
Length = 429
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALD 63
+H+E E+ ++I ++ + V+ DA++ +AGY + D
Sbjct: 273 MHYEAELVVVIGKQARNVSEADAMDYVAGYTVCND 307
>sp|Q6GLT8|FAHD2_XENLA Fumarylacetoacetate hydrolase domain-containing protein 2
OS=Xenopus laevis GN=fahd2 PE=2 SV=1
Length = 319
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 25 DGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLT 65
+ EV E E+ +I ++ K + DA++ + GY +A D++
Sbjct: 157 ESQEVDWEAELAFVIGKKGKNIKEEDAMDHVVGYTVAHDVS 197
>sp|Q4L4Y4|Y1982_STAHJ Uncharacterized protein SH1982 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1982 PE=3 SV=1
Length = 301
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ I GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYIYGYTIINDITD 180
>sp|Q9RPU5|HPAG_SALDU 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase OS=Salmonella dublin GN=hpaG
PE=3 SV=1
Length = 429
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 29 VHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALD 63
+H+E E+ ++I + +KV+ +A+ +AGY + D
Sbjct: 273 MHYEAELVVVIGKTARKVSEAEAMEYVAGYTVCND 307
>sp|Q5HHB6|Y973_STAAC Uncharacterized protein SACOL0973 OS=Staphylococcus aureus (strain
COL) GN=SACOL0973 PE=3 SV=1
Length = 300
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD 180
>sp|Q99VC2|Y968_STAAM Uncharacterized protein SAV0968 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV0968 PE=1 SV=1
Length = 300
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD 180
>sp|Q6GIC0|Y930_STAAR Uncharacterized protein SAR0930 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR0930 PE=3 SV=1
Length = 300
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD 180
>sp|Q2FZT4|Y906_STAA8 Uncharacterized protein SAOUHSC_00906 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_00906 PE=3 SV=1
Length = 300
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD 180
>sp|Q2FIA7|Y871_STAA3 Uncharacterized protein SAUSA300_0871 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_0871 PE=3 SV=1
Length = 300
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD 180
>sp|Q7A1B6|Y850_STAAW Uncharacterized protein MW0850 OS=Staphylococcus aureus (strain
MW2) GN=MW0850 PE=3 SV=1
Length = 300
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD 180
>sp|Q6GAV8|Y838_STAAS Uncharacterized protein SAS0838 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS0838 PE=3 SV=1
Length = 300
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD 180
>sp|Q2YWW3|Y837_STAAB Uncharacterized protein SAB0837 OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB0837 PE=3 SV=1
Length = 300
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD 180
>sp|Q7A6H3|Y829_STAAN Uncharacterized protein SA0829 OS=Staphylococcus aureus (strain
N315) GN=SA0829 PE=1 SV=1
Length = 300
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD 180
>sp|Q8CPT8|Y665_STAES Uncharacterized protein SE_0665 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_0665 PE=3 SV=1
Length = 301
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 28 EVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
++ +E E+GI+I + +K+ R AL+ I GY + D+T+
Sbjct: 142 QLDYEGELGIVIGKSGEKIPRGLALDYIYGYTIINDITD 180
>sp|Q5HQJ3|Y556_STAEQ Uncharacterized protein SERP0556 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0556 PE=3 SV=1
Length = 301
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 28 EVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
++ +E E+GI+I + +K+ R AL+ I GY + D+T+
Sbjct: 142 QLDYEGELGIVIGKSGEKIPRGLALDYIYGYTIINDITD 180
>sp|Q49WA8|Y1806_STAS1 Uncharacterized protein SSP1806 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1806 PE=3 SV=1
Length = 301
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 19 HHPGIADGSEVHHEVEMGIIISQRCKKVNRYDALNCIAGYCLALDLTE 66
+H I D ++ +E E+GI+I + +K+ + AL+ + GY + D+T+
Sbjct: 135 NHKDITD--QLDYEGELGIVIGKSGEKIPKGLALDYVYGYTIINDITD 180
>sp|Q8CP76|EBH_STAES Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=ebh PE=4 SV=1
Length = 9439
Score = 28.9 bits (63), Expect = 9.2, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 8 DNVNSMTLARDHHPGI--ADGSEVHHEVEMGIIISQRCKKVNRYDALN 53
DN NS T A +H + A + HE+E I+SQ N+ ALN
Sbjct: 7152 DNKNSKTFAVNHLDNLNQAQKEALTHEIEQATIVSQVNNIYNKAKALN 7199
>sp|Q5HPA2|EBH_STAEQ Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=ebh PE=4 SV=2
Length = 9439
Score = 28.9 bits (63), Expect = 9.2, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 8 DNVNSMTLARDHHPGI--ADGSEVHHEVEMGIIISQRCKKVNRYDALN 53
DN NS T A +H + A + HE+E I+SQ N+ ALN
Sbjct: 7152 DNKNSKTFAVNHLDNLNQAQKEALTHEIEQATIVSQVNNIYNKAKALN 7199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,448,446
Number of Sequences: 539616
Number of extensions: 707615
Number of successful extensions: 1193
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1149
Number of HSP's gapped (non-prelim): 48
length of query: 70
length of database: 191,569,459
effective HSP length: 42
effective length of query: 28
effective length of database: 168,905,587
effective search space: 4729356436
effective search space used: 4729356436
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)