Your job contains 1 sequence.
>psy5391
MSSRWYPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIY
NVTVKHVESTLENATSMAEWVSWLAFQMTLQPTRTVSTSLFESYLSSGIITSAKRLMKCI
KLQNGLFIKINPIGTKDLLVLGVWGALSLVKTARLLE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5391
(157 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035335 - symbol:mRpL23 "mitochondrial ribosomal p... 260 2.1e-22 1
UNIPROTKB|F1NVZ3 - symbol:MRPL23 "Uncharacterized protein... 193 2.6e-15 1
ZFIN|ZDB-GENE-040625-12 - symbol:mrpl23 "mitochondrial ri... 193 2.6e-15 1
UNIPROTKB|F1PBY1 - symbol:MRPL23 "Uncharacterized protein... 189 6.9e-15 1
UNIPROTKB|F1NK84 - symbol:MRPL23 "Uncharacterized protein... 185 1.8e-14 1
MGI|MGI:1196612 - symbol:Mrpl23 "mitochondrial ribosomal ... 181 4.9e-14 1
RGD|68343 - symbol:Mrpl23 "mitochondrial ribosomal protei... 181 4.9e-14 1
UNIPROTKB|A6NJD9 - symbol:MRPL23 "39S ribosomal protein L... 173 3.4e-13 1
UNIPROTKB|A8MVT4 - symbol:MRPL23 "39S ribosomal protein L... 173 3.4e-13 1
UNIPROTKB|A8MYK1 - symbol:MRPL23 "39S ribosomal protein L... 173 3.4e-13 1
UNIPROTKB|H7C2P7 - symbol:MRPL23 "39S ribosomal protein L... 173 3.4e-13 1
UNIPROTKB|Q16540 - symbol:MRPL23 "39S ribosomal protein L... 173 3.4e-13 1
WB|WBGene00020348 - symbol:mrpl-23 species:6239 "Caenorha... 171 5.6e-13 1
ASPGD|ASPL0000058899 - symbol:AN0123 species:162425 "Emer... 114 1.9e-06 1
>FB|FBgn0035335 [details] [associations]
symbol:mRpL23 "mitochondrial ribosomal protein L23"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 InterPro:IPR012678 InterPro:IPR013025
Pfam:PF00276 EMBL:AE014296 GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0005762 GO:GO:0003735 SUPFAM:SSF54189
eggNOG:NOG309821 GeneTree:ENSGT00390000007739 OMA:RVFLPNF CTD:6150
EMBL:AY071415 RefSeq:NP_001137873.1 RefSeq:NP_523889.1
UniGene:Dm.2750 ProteinModelPortal:Q9W021 SMR:Q9W021 STRING:Q9W021
PaxDb:Q9W021 PRIDE:Q9W021 EnsemblMetazoa:FBtr0072900
EnsemblMetazoa:FBtr0289966 EnsemblMetazoa:FBtr0331415
EnsemblMetazoa:FBtr0331416 GeneID:38302 KEGG:dme:Dmel_CG1320
FlyBase:FBgn0035335 InParanoid:Q9W021 OrthoDB:EOG4THT9F
PhylomeDB:Q9W021 GenomeRNAi:38302 NextBio:807945 Bgee:Q9W021
GermOnline:CG1320 Uniprot:Q9W021
Length = 150
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 45/71 (63%), Positives = 56/71 (78%)
Query: 1 MSSRWYPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIY 60
MS+RWYPIYQ+GNPQLR+FLPNFWMKL+R E PPNVV F V + MT +D++NYLEKIY
Sbjct: 1 MSTRWYPIYQRGNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIY 60
Query: 61 NVTVKHVESTL 71
+ V V + +
Sbjct: 61 KLPVVDVRTRI 71
>UNIPROTKB|F1NVZ3 [details] [associations]
symbol:MRPL23 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR012677 InterPro:IPR012678 InterPro:IPR013025
Pfam:PF00276 GO:GO:0005739 GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54189
GeneTree:ENSGT00390000007739 OMA:RVFLPNF EMBL:AC159011
IPI:IPI00822064 Ensembl:ENSGALT00000010592 ArrayExpress:F1NVZ3
Uniprot:F1NVZ3
Length = 152
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/67 (56%), Positives = 46/67 (68%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+YQ G PQLRIF PNF+M VR P P + V+F V + MT DIKNYLEKIYNV V
Sbjct: 7 YPLYQLGGPQLRIFRPNFFMLAVRPGVPQPEDTVQFRVSMEMTKVDIKNYLEKIYNVPVA 66
Query: 66 HVESTLE 72
V + ++
Sbjct: 67 AVRTRIQ 73
>ZFIN|ZDB-GENE-040625-12 [details] [associations]
symbol:mrpl23 "mitochondrial ribosomal protein L23"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR012677 InterPro:IPR012678
InterPro:IPR013025 Pfam:PF00276 ZFIN:ZDB-GENE-040625-12
GO:GO:0005739 GO:GO:0000166 GO:GO:0006412 Gene3D:3.30.70.330
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54189 eggNOG:NOG309821
GeneTree:ENSGT00390000007739 HOGENOM:HOG000231896 OMA:RVFLPNF
EMBL:BC071325 IPI:IPI00497520 RefSeq:NP_001002052.1
UniGene:Dr.11081 ProteinModelPortal:Q6IQS9 STRING:Q6IQS9
PRIDE:Q6IQS9 Ensembl:ENSDART00000067179 GeneID:415142
KEGG:dre:415142 CTD:6150 HOVERGEN:HBG052914 InParanoid:Q6IQS9
OrthoDB:EOG4N5VZ3 NextBio:20818819 ArrayExpress:Q6IQS9 Bgee:Q6IQS9
Uniprot:Q6IQS9
Length = 153
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+YQ GNPQLRIF P F M LVR + PP+ V+F + +AMT D++NYLEKIY+V V
Sbjct: 7 YPLYQLGNPQLRIFRPTFNMTLVRPGKEQPPDTVQFRISMAMTKCDVRNYLEKIYSVPVS 66
Query: 66 HVESTLE 72
V + ++
Sbjct: 67 AVRTRIQ 73
>UNIPROTKB|F1PBY1 [details] [associations]
symbol:MRPL23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR012677 InterPro:IPR012678
InterPro:IPR013025 Pfam:PF00276 GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54189
GeneTree:ENSGT00390000007739 OMA:RVFLPNF CTD:6150 EMBL:AAEX03011552
RefSeq:XP_540784.3 Ensembl:ENSCAFT00000016030 GeneID:483663
KEGG:cfa:483663 Uniprot:F1PBY1
Length = 153
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+YQ GNPQLRIF NF+++LVR P + V+F +P+ MT D++NYLE+IYNV V
Sbjct: 7 YPLYQLGNPQLRIFRTNFFIQLVRPGTAQPEDTVQFRIPMEMTRVDLRNYLERIYNVPVA 66
Query: 66 HVESTLENATS 76
V + +++ ++
Sbjct: 67 AVRTRVQHGSN 77
>UNIPROTKB|F1NK84 [details] [associations]
symbol:MRPL23 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR012678 InterPro:IPR013025
Pfam:PF00276 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF54189 GeneTree:ENSGT00390000007739 EMBL:AC159011
IPI:IPI00603860 Ensembl:ENSGALT00000039265 ArrayExpress:F1NK84
Uniprot:F1NK84
Length = 105
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 36/57 (63%), Positives = 41/57 (71%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNV 62
YP+YQ G PQLRIF PNF+M VR P P + V+F V + MT DIKNYLEKIYNV
Sbjct: 10 YPLYQLGGPQLRIFRPNFFMLAVRPGVPQPEDTVQFRVSMEMTKVDIKNYLEKIYNV 66
>MGI|MGI:1196612 [details] [associations]
symbol:Mrpl23 "mitochondrial ribosomal protein L23"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR012677
InterPro:IPR012678 InterPro:IPR013025 Pfam:PF00276 EMBL:AB049646
MGI:MGI:1196612 GO:GO:0005739 GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54189
eggNOG:NOG309821 GeneTree:ENSGT00390000007739 HOGENOM:HOG000231896
OMA:RVFLPNF CTD:6150 HOVERGEN:HBG052914 OrthoDB:EOG4N5VZ3
EMBL:U84902 EMBL:U84903 EMBL:AK086805 EMBL:BC081460 EMBL:U71209
IPI:IPI00136310 RefSeq:NP_035418.1 UniGene:Mm.12144
ProteinModelPortal:O35972 SMR:O35972 STRING:O35972
PhosphoSite:O35972 PaxDb:O35972 PRIDE:O35972
Ensembl:ENSMUST00000038675 GeneID:19935 KEGG:mmu:19935
InParanoid:O35972 NextBio:297449 Bgee:O35972 CleanEx:MM_MRPL23
Genevestigator:O35972 GermOnline:ENSMUSG00000037772
GermOnline:ENSMUSG00000075279 Uniprot:O35972
Length = 146
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 32/71 (45%), Positives = 50/71 (70%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+YQ G PQLR+F NF+++LVR P + V+F +P+ MT D++NYLE+IYNV V
Sbjct: 7 YPLYQLGGPQLRVFRTNFFIQLVRPGTAQPEDTVQFRIPMEMTRVDLRNYLEQIYNVPVA 66
Query: 66 HVESTLENATS 76
V + +++ ++
Sbjct: 67 AVRTRVQHGSN 77
>RGD|68343 [details] [associations]
symbol:Mrpl23 "mitochondrial ribosomal protein L23" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR012677 InterPro:IPR012678 InterPro:IPR013025
Pfam:PF00276 EMBL:U62635 RGD:68343 GO:GO:0005739 GO:GO:0000166
GO:GO:0006412 Gene3D:3.30.70.330 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF54189 eggNOG:NOG309821 GeneTree:ENSGT00390000007739
HOGENOM:HOG000231896 OMA:RVFLPNF CTD:6150 HOVERGEN:HBG052914
OrthoDB:EOG4N5VZ3 IPI:IPI00211861 RefSeq:NP_071974.1 UniGene:Rn.1608
ProteinModelPortal:Q63750 IntAct:Q63750 STRING:Q63750 PRIDE:Q63750
Ensembl:ENSRNOT00000027585 GeneID:64360 KEGG:rno:64360
UCSC:RGD:68343 InParanoid:Q63750 NextBio:613062
Genevestigator:Q63750 GermOnline:ENSRNOG00000020354 Uniprot:Q63750
Length = 146
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 32/71 (45%), Positives = 50/71 (70%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+YQ G PQLR+F NF+++LVR P + V+F +P+ MT D++NYLE+IYNV V
Sbjct: 7 YPLYQLGGPQLRVFRTNFFIQLVRPGTAQPEDTVQFRIPMEMTRVDLRNYLEQIYNVPVA 66
Query: 66 HVESTLENATS 76
V + +++ ++
Sbjct: 67 AVRTRVQHGSN 77
>UNIPROTKB|A6NJD9 [details] [associations]
symbol:MRPL23 "39S ribosomal protein L23, mitochondrial"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR012677 InterPro:IPR012678
InterPro:IPR013025 Pfam:PF00276 GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0005840 GO:GO:0003735 EMBL:AC051649
SUPFAM:SSF54189 HGNC:HGNC:10322 IPI:IPI00658024
ProteinModelPortal:A6NJD9 SMR:A6NJD9 STRING:A6NJD9 PRIDE:A6NJD9
Ensembl:ENST00000381514 HOGENOM:HOG000207863 ArrayExpress:A6NJD9
Bgee:A6NJD9 Uniprot:A6NJD9
Length = 163
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+Y+ G PQLR+F NF+++LVR P + V+F +P+ MT D++NYLE IYNV V
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 66 HVESTLENATS 76
V + +++ ++
Sbjct: 67 AVRTRVQHGSN 77
>UNIPROTKB|A8MVT4 [details] [associations]
symbol:MRPL23 "39S ribosomal protein L23, mitochondrial"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR012677 InterPro:IPR012678
InterPro:IPR013025 Pfam:PF00276 GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0005840 GO:GO:0003735 EMBL:AC051649
SUPFAM:SSF54189 HOGENOM:HOG000231896 HOVERGEN:HBG052914
HGNC:HGNC:10322 IPI:IPI00853031 ProteinModelPortal:A8MVT4
SMR:A8MVT4 STRING:A8MVT4 PRIDE:A8MVT4 Ensembl:ENST00000397294
ArrayExpress:A8MVT4 Bgee:A8MVT4 Uniprot:A8MVT4
Length = 166
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+Y+ G PQLR+F NF+++LVR P + V+F +P+ MT D++NYLE IYNV V
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 66 HVESTLENATS 76
V + +++ ++
Sbjct: 67 AVRTRVQHGSN 77
>UNIPROTKB|A8MYK1 [details] [associations]
symbol:MRPL23 "39S ribosomal protein L23, mitochondrial"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR012677 InterPro:IPR012678
InterPro:IPR013025 Pfam:PF00276 GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0005840 GO:GO:0003735 EMBL:AC051649
SUPFAM:SSF54189 HOGENOM:HOG000231896 HOVERGEN:HBG052914
HGNC:HGNC:10322 IPI:IPI00853201 ProteinModelPortal:A8MYK1
SMR:A8MYK1 STRING:A8MYK1 Ensembl:ENST00000397297
ArrayExpress:A8MYK1 Bgee:A8MYK1 Uniprot:A8MYK1
Length = 191
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+Y+ G PQLR+F NF+++LVR P + V+F +P+ MT D++NYLE IYNV V
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 66 HVESTLENATS 76
V + +++ ++
Sbjct: 67 AVRTRVQHGSN 77
>UNIPROTKB|H7C2P7 [details] [associations]
symbol:MRPL23 "39S ribosomal protein L23, mitochondrial"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR012677 InterPro:IPR012678
InterPro:IPR013025 Pfam:PF00276 GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0005840 GO:GO:0003735 EMBL:AC051649
SUPFAM:SSF54189 HGNC:HGNC:10322 ProteinModelPortal:H7C2P7
Ensembl:ENST00000429295 Uniprot:H7C2P7
Length = 118
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+Y+ G PQLR+F NF+++LVR P + V+F +P+ MT D++NYLE IYNV V
Sbjct: 2 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 61
Query: 66 HVESTLENATS 76
V + +++ ++
Sbjct: 62 AVRTRVQHGSN 72
>UNIPROTKB|Q16540 [details] [associations]
symbol:MRPL23 "39S ribosomal protein L23, mitochondrial"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=TAS] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=TAS] InterPro:IPR012677
InterPro:IPR012678 InterPro:IPR013025 Pfam:PF00276 GO:GO:0000166
GO:GO:0006412 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0005762
GO:GO:0003735 EMBL:CH471158 EMBL:AC051649 SUPFAM:SSF54189
eggNOG:NOG309821 HOGENOM:HOG000231896 OMA:RVFLPNF CTD:6150
HOVERGEN:HBG052914 OrthoDB:EOG4N5VZ3 EMBL:Z49254 EMBL:U26596
EMBL:BC027710 EMBL:AB051340 IPI:IPI00293476 RefSeq:NP_066957.3
UniGene:Hs.3254 ProteinModelPortal:Q16540 SMR:Q16540 IntAct:Q16540
STRING:Q16540 PhosphoSite:Q16540 DMDM:68566020 PaxDb:Q16540
PRIDE:Q16540 DNASU:6150 Ensembl:ENST00000381519
Ensembl:ENST00000397298 GeneID:6150 KEGG:hsa:6150 UCSC:uc001lux.3
GeneCards:GC11P001961 HGNC:HGNC:10322 MIM:600789 neXtProt:NX_Q16540
PharmGKB:PA30953 GenomeRNAi:6150 NextBio:23889 ArrayExpress:Q16540
Bgee:Q16540 CleanEx:HS_MRPL23 Genevestigator:Q16540
GermOnline:ENSG00000205751 Uniprot:Q16540
Length = 153
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 6 YPIYQKGNPQLRIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVK 65
YP+Y+ G PQLR+F NF+++LVR P + V+F +P+ MT D++NYLE IYNV V
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 66 HVESTLENATS 76
V + +++ ++
Sbjct: 67 AVRTRVQHGSN 77
>WB|WBGene00020348 [details] [associations]
symbol:mrpl-23 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] InterPro:IPR012677
InterPro:IPR012678 InterPro:IPR013025 Pfam:PF00276 GO:GO:0005739
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0005840 GO:GO:0040035 GO:GO:0003735
SUPFAM:SSF54189 EMBL:FO080899 PIR:T28751 RefSeq:NP_491791.1
ProteinModelPortal:Q9GYS9 STRING:Q9GYS9 PaxDb:Q9GYS9
EnsemblMetazoa:T08B2.8.1 EnsemblMetazoa:T08B2.8.2 GeneID:188274
KEGG:cel:CELE_T08B2.8 UCSC:T08B2.8 CTD:188274 WormBase:T08B2.8
eggNOG:NOG309821 GeneTree:ENSGT00390000007739 HOGENOM:HOG000231896
InParanoid:Q9GYS9 OMA:RVFLPNF NextBio:938212 Uniprot:Q9GYS9
Length = 159
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 41/125 (32%), Positives = 66/125 (52%)
Query: 1 MSSRWYPIYQKGNPQLRIFLPNFWMKLVRS----KEPLPPNVVEFHVPLAMTNHDIKNYL 56
M+SR ++Q GNPQ R+FLP+FWM +V S + LP N V+F V M+ HDI+ YL
Sbjct: 1 MTSRLARLWQPGNPQRRVFLPDFWMAVVESPSVGRNRLPRNCVKFEVDPRMSRHDIREYL 60
Query: 57 EKIYNVTVKHVESTLENATSMAEWVSWLAFQMTLQPTRTVSTSLFESYLSSGIITSAKRL 116
KIY++ V+ V + ++ W S L Q + + ++S G S ++
Sbjct: 61 TKIYDLPVRDVRTEVQMGD--ITWNSKLDHQYKKAMWKDEDKKIAYVFMSKGFEFSYPQM 118
Query: 117 MKCIK 121
+ ++
Sbjct: 119 FEALE 123
>ASPGD|ASPL0000058899 [details] [associations]
symbol:AN0123 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR012678 InterPro:IPR013025 Pfam:PF00276 EMBL:BN001308
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AACD01000004
eggNOG:NOG261038 OrthoDB:EOG48SM3C SUPFAM:SSF54189
RefSeq:XP_657727.1 EnsemblFungi:CADANIAT00002624 GeneID:2875901
KEGG:ani:AN0123.2 HOGENOM:HOG000176023 OMA:VEMKEPF Uniprot:Q5BH57
Length = 206
Score = 114 (45.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 17 RIFLPNFWMKLVRSKEPLPPNVVEFHVPLAMTNHDIKNYLEKIYNVTVKHVESTLE 72
+++LPNF + LVR+ LPP F+VPL D+++YL+++Y V V + S +E
Sbjct: 27 QVYLPNFTVALVRTPF-LPPRYASFYVPLTFNKLDMRDYLQRLYGVGVLSIRSYVE 81
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 157 157 0.00079 106 3 11 22 0.47 31
30 0.42 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 603 (64 KB)
Total size of DFA: 157 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.06u 0.13s 17.19t Elapsed: 00:00:00
Total cpu time: 17.06u 0.13s 17.19t Elapsed: 00:00:01
Start: Thu Aug 15 16:02:25 2013 End: Thu Aug 15 16:02:26 2013