BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5392
(100 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345497770|ref|XP_001599680.2| PREDICTED: semaphorin-1A-like [Nasonia vitripennis]
Length = 769
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/99 (95%), Positives = 98/99 (98%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDSMSLNAPNFVSS+TQGDFVYFFFRETAVE+INCGKAVYSRVARV
Sbjct: 185 MDPIIYREPLQTEQYDSMSLNAPNFVSSMTQGDFVYFFFRETAVEYINCGKAVYSRVARV 244
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYDRGGPHRFRNRWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 245 CKYDRGGPHRFRNRWTSFLKSRLNCSVTGDFPFYFNEIQ 283
>gi|322791473|gb|EFZ15870.1| hypothetical protein SINV_05024 [Solenopsis invicta]
Length = 630
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/99 (94%), Positives = 98/99 (98%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDSMSLNAPNFVSS++QGDFVYFFFRETAVE+INCGKAVYSRVARV
Sbjct: 89 MDPIIYREPLQTEQYDSMSLNAPNFVSSMSQGDFVYFFFRETAVEYINCGKAVYSRVARV 148
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYDRGGPHRFRNRWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 149 CKYDRGGPHRFRNRWTSFLKSRLNCSVTGDFPFYFNEIQ 187
>gi|332031158|gb|EGI70735.1| Semaphorin-1A [Acromyrmex echinatior]
Length = 701
Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/99 (94%), Positives = 98/99 (98%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDSMSLNAPNFVSS++QGDFVYFFFRETAVE+INCGKAVYSRVARV
Sbjct: 121 MDPIIYREPLQTEQYDSMSLNAPNFVSSMSQGDFVYFFFRETAVEYINCGKAVYSRVARV 180
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYDRGGPHRFRNRWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 181 CKYDRGGPHRFRNRWTSFLKSRLNCSVTGDFPFYFNEIQ 219
>gi|307198545|gb|EFN79430.1| Semaphorin-1A [Harpegnathos saltator]
Length = 739
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/99 (93%), Positives = 98/99 (98%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDSMSLNAPNFVSS++QGDFVYFFFRETAVE+INCGKAVYSRVARV
Sbjct: 159 MDPIIYREPLQTEQYDSMSLNAPNFVSSMSQGDFVYFFFRETAVEYINCGKAVYSRVARV 218
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYDRGGPHRFRNRWTS+LKSRLNCSV GDFPFYF+EIQ
Sbjct: 219 CKYDRGGPHRFRNRWTSYLKSRLNCSVTGDFPFYFNEIQ 257
>gi|442626901|ref|NP_001260265.1| Sema-1a, isoform G [Drosophila melanogaster]
gi|440213576|gb|AGB92801.1| Sema-1a, isoform G [Drosophila melanogaster]
Length = 1131
Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 229 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 288
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 289 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 326
>gi|195156593|ref|XP_002019184.1| GL25556 [Drosophila persimilis]
gi|194115337|gb|EDW37380.1| GL25556 [Drosophila persimilis]
Length = 905
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 231 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 290
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 291 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 328
>gi|442626905|ref|NP_001260267.1| Sema-1a, isoform I [Drosophila melanogaster]
gi|440213578|gb|AGB92803.1| Sema-1a, isoform I [Drosophila melanogaster]
Length = 817
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 229 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 288
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 289 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 326
>gi|194858641|ref|XP_001969222.1| GG25296 [Drosophila erecta]
gi|190661089|gb|EDV58281.1| GG25296 [Drosophila erecta]
Length = 902
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 233 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 292
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 293 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 330
>gi|442626903|ref|NP_001260266.1| Sema-1a, isoform H [Drosophila melanogaster]
gi|440213577|gb|AGB92802.1| Sema-1a, isoform H [Drosophila melanogaster]
Length = 820
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 229 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 288
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 289 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 326
>gi|28574079|ref|NP_723407.2| Sema-1a, isoform A [Drosophila melanogaster]
gi|28380314|gb|AAF52696.2| Sema-1a, isoform A [Drosophila melanogaster]
Length = 899
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 229 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 288
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 289 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 326
>gi|195577665|ref|XP_002078689.1| GD23556 [Drosophila simulans]
gi|194190698|gb|EDX04274.1| GD23556 [Drosophila simulans]
Length = 897
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 229 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 288
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 289 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 326
>gi|320544704|ref|NP_001188731.1| Sema-1a, isoform D [Drosophila melanogaster]
gi|320544706|ref|NP_609243.3| Sema-1a, isoform E [Drosophila melanogaster]
gi|318068356|gb|ADV36981.1| Sema-1a, isoform D [Drosophila melanogaster]
gi|318068357|gb|AAN10677.3| Sema-1a, isoform E [Drosophila melanogaster]
Length = 905
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 229 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 288
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 289 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 326
>gi|195033209|ref|XP_001988640.1| GH11272 [Drosophila grimshawi]
gi|193904640|gb|EDW03507.1| GH11272 [Drosophila grimshawi]
Length = 774
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 135 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 194
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 195 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 232
>gi|320544708|ref|NP_001188732.1| Sema-1a, isoform F [Drosophila melanogaster]
gi|318068358|gb|ADV36982.1| Sema-1a, isoform F [Drosophila melanogaster]
Length = 826
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 229 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 288
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 289 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 326
>gi|195339291|ref|XP_002036253.1| GM17077 [Drosophila sechellia]
gi|194130133|gb|EDW52176.1| GM17077 [Drosophila sechellia]
Length = 897
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 229 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 288
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 289 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 326
>gi|195473117|ref|XP_002088842.1| GE18787 [Drosophila yakuba]
gi|194174943|gb|EDW88554.1| GE18787 [Drosophila yakuba]
Length = 901
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 231 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 290
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 291 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 328
>gi|198472037|ref|XP_001355818.2| Sema-1a [Drosophila pseudoobscura pseudoobscura]
gi|198139577|gb|EAL32877.2| Sema-1a [Drosophila pseudoobscura pseudoobscura]
Length = 838
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 164 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 223
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 224 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 261
>gi|194760726|ref|XP_001962588.1| GF15536 [Drosophila ananassae]
gi|190616285|gb|EDV31809.1| GF15536 [Drosophila ananassae]
Length = 917
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 246 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 305
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 306 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 343
>gi|195118360|ref|XP_002003705.1| GI21441 [Drosophila mojavensis]
gi|193914280|gb|EDW13147.1| GI21441 [Drosophila mojavensis]
Length = 865
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 195 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 254
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 255 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 292
>gi|302393611|gb|ADL32751.1| MIP14656p [Drosophila melanogaster]
Length = 546
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 90 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 149
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 150 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 187
>gi|1197819|gb|AAA88789.1| semaphorin-I [Drosophila melanogaster]
Length = 771
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 180 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 239
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 240 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 277
>gi|45645191|sp|Q24322.2|SEM1A_DROME RecName: Full=Semaphorin-1A; AltName: Full=Semaphorin-I; Short=Sema
I; Flags: Precursor
Length = 850
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 180 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 239
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 240 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 277
>gi|630871|pir||B49423 semaphorin I - fruit fly (Drosophila melanogaster) (fragment)
Length = 656
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 82 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 141
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 142 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 179
>gi|195443440|ref|XP_002069425.1| GK18750 [Drosophila willistoni]
gi|194165510|gb|EDW80411.1| GK18750 [Drosophila willistoni]
Length = 851
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 180 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 239
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 240 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 277
>gi|195385825|ref|XP_002051605.1| GJ11247 [Drosophila virilis]
gi|194148062|gb|EDW63760.1| GJ11247 [Drosophila virilis]
Length = 868
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 97/98 (98%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DPIIYREPLQTEQYDS+SLNAPNFVSS TQGDFVYFFFRETAVEFINCGKA+YSRVARVC
Sbjct: 195 DPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVC 254
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPHRFRNRWTSFLKSRLNCS+PGD+PFYF+EIQ
Sbjct: 255 KWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQ 292
>gi|340709066|ref|XP_003393136.1| PREDICTED: semaphorin-1A-like [Bombus terrestris]
Length = 771
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/99 (91%), Positives = 95/99 (95%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDS SLNAPNFVSS+ QGDFVYFFFRETAVE+INCGK VYSRVARV
Sbjct: 191 MDPIIYREPLQTEQYDSKSLNAPNFVSSMAQGDFVYFFFRETAVEYINCGKTVYSRVARV 250
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYDRGGPHR+RNRWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 251 CKYDRGGPHRYRNRWTSFLKSRLNCSVTGDFPFYFNEIQ 289
>gi|350419131|ref|XP_003492080.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-1A-like [Bombus
impatiens]
Length = 788
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/99 (91%), Positives = 95/99 (95%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDS SLNAPNFVSS+ QGDFVYFFFRETAVE+INCGK VYSRVARV
Sbjct: 191 MDPIIYREPLQTEQYDSKSLNAPNFVSSMAQGDFVYFFFRETAVEYINCGKTVYSRVARV 250
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYDRGGPHR+RNRWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 251 CKYDRGGPHRYRNRWTSFLKSRLNCSVTGDFPFYFNEIQ 289
>gi|380014235|ref|XP_003691145.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-1A-like [Apis florea]
Length = 734
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 95/99 (95%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDS SLNAPNFV+S+ QGDFVYFFFRETAVE+INCGK VYSRVARV
Sbjct: 154 MDPIIYREPLQTEQYDSKSLNAPNFVNSMAQGDFVYFFFRETAVEYINCGKTVYSRVARV 213
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYDRGGPHR+RNRWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 214 CKYDRGGPHRYRNRWTSFLKSRLNCSVTGDFPFYFNEIQ 252
>gi|328792356|ref|XP_394163.3| PREDICTED: semaphorin-1A [Apis mellifera]
Length = 771
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 95/99 (95%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDS SLNAPNFV+S+ QGDFVYFFFRETAVE+INCGK VYSRVARV
Sbjct: 191 MDPIIYREPLQTEQYDSKSLNAPNFVNSMAQGDFVYFFFRETAVEYINCGKTVYSRVARV 250
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYDRGGPHR+RNRWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 251 CKYDRGGPHRYRNRWTSFLKSRLNCSVTGDFPFYFNEIQ 289
>gi|91087593|ref|XP_972078.1| PREDICTED: similar to Sema-1a CG18405-PA [Tribolium castaneum]
Length = 1326
Score = 197 bits (501), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/99 (91%), Positives = 96/99 (96%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDSMSLNAP+FVSS+TQ DFVYFFFRETAVE+INCGKAVYSRVARV
Sbjct: 704 MDPIIYREPLQTEQYDSMSLNAPDFVSSMTQKDFVYFFFRETAVEYINCGKAVYSRVARV 763
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK DRGGPHRFRNRWTSFLKSRLNCSV G+FPFYF+EIQ
Sbjct: 764 CKNDRGGPHRFRNRWTSFLKSRLNCSVTGEFPFYFNEIQ 802
>gi|383864859|ref|XP_003707895.1| PREDICTED: semaphorin-1A-like [Megachile rotundata]
Length = 771
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 95/99 (95%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDS SLN PNFVSS++QGDFVYFFFRETAVE++NCGK VYSRVARV
Sbjct: 191 MDPIIYREPLQTEQYDSKSLNTPNFVSSMSQGDFVYFFFRETAVEYMNCGKTVYSRVARV 250
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYDRGGPHR+RNRWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 251 CKYDRGGPHRYRNRWTSFLKSRLNCSVTGDFPFYFNEIQ 289
>gi|157130662|ref|XP_001661952.1| semaphorin [Aedes aegypti]
gi|108881913|gb|EAT46138.1| AAEL002653-PA, partial [Aedes aegypti]
Length = 677
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/99 (87%), Positives = 96/99 (96%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
+DPIIYREPLQTEQYDS+SLNAPNFV S TQGDFVYFFFRETAVEFINCGKAV SRVARV
Sbjct: 15 LDPIIYREPLQTEQYDSLSLNAPNFVGSFTQGDFVYFFFRETAVEFINCGKAVVSRVARV 74
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK+D+GGPHR++NRWT++LKSRLNCS+PGDFPFYFDEIQ
Sbjct: 75 CKWDKGGPHRYKNRWTTYLKSRLNCSMPGDFPFYFDEIQ 113
>gi|270011103|gb|EFA07551.1| semaphorin-1a-like protein [Tribolium castaneum]
Length = 765
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/99 (91%), Positives = 96/99 (96%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIYREPLQTEQYDSMSLNAP+FVSS+TQ DFVYFFFRETAVE+INCGKAVYSRVARV
Sbjct: 181 MDPIIYREPLQTEQYDSMSLNAPDFVSSMTQKDFVYFFFRETAVEYINCGKAVYSRVARV 240
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK DRGGPHRFRNRWTSFLKSRLNCSV G+FPFYF+EIQ
Sbjct: 241 CKNDRGGPHRFRNRWTSFLKSRLNCSVTGEFPFYFNEIQ 279
>gi|170030400|ref|XP_001843077.1| semaphorin [Culex quinquefasciatus]
gi|167866969|gb|EDS30352.1| semaphorin [Culex quinquefasciatus]
Length = 325
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 87/99 (87%), Positives = 97/99 (97%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
+DPIIYREPLQTEQYDS+SLNAPNFV S TQGDFVYFFFRETAVEFINCGKAV+SRVARV
Sbjct: 129 LDPIIYREPLQTEQYDSLSLNAPNFVGSFTQGDFVYFFFRETAVEFINCGKAVFSRVARV 188
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK+D+GGPHRF+NRWT++LKSRLNCS+PGDFPFYFDEI+
Sbjct: 189 CKWDKGGPHRFKNRWTTYLKSRLNCSMPGDFPFYFDEIR 227
>gi|242007665|ref|XP_002424651.1| Semaphorin-1A precursor, putative [Pediculus humanus corporis]
gi|212508125|gb|EEB11913.1| Semaphorin-1A precursor, putative [Pediculus humanus corporis]
Length = 797
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 94/99 (94%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
+DPIIYREPLQTE Y S+SLNAPNFV+S+TQGD+VYFFFRETAVE+INCGK VYSRVARV
Sbjct: 159 IDPIIYREPLQTEHYVSLSLNAPNFVNSMTQGDYVYFFFRETAVEYINCGKTVYSRVARV 218
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CKYD+GGPHR R RWTSFLKSRLNCSVPGDFPFYF+EIQ
Sbjct: 219 CKYDKGGPHRLRERWTSFLKSRLNCSVPGDFPFYFNEIQ 257
>gi|158293410|ref|XP_314756.4| AGAP008656-PA [Anopheles gambiae str. PEST]
gi|157016692|gb|EAA10136.5| AGAP008656-PA [Anopheles gambiae str. PEST]
Length = 812
Score = 190 bits (483), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 85/99 (85%), Positives = 95/99 (95%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
+DPIIYRE LQTEQYDS+SLNAPNFV S TQGDFVYFFFRETAVEFINCGKA++SRVARV
Sbjct: 150 LDPIIYREHLQTEQYDSLSLNAPNFVGSFTQGDFVYFFFRETAVEFINCGKAIFSRVARV 209
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK+D+GGP+R +NRWTS+LKSRLNCS+PGDFPFYFDEIQ
Sbjct: 210 CKWDKGGPNRLKNRWTSYLKSRLNCSMPGDFPFYFDEIQ 248
>gi|312380760|gb|EFR26668.1| hypothetical protein AND_07102 [Anopheles darlingi]
Length = 1288
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 94/99 (94%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
+DPIIYRE LQTEQ+DS+SLNAPNFV S TQGDFVYFFFRETAVEFINCGKA++SRVARV
Sbjct: 83 LDPIIYREHLQTEQHDSLSLNAPNFVGSFTQGDFVYFFFRETAVEFINCGKAIFSRVARV 142
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK+D+GGP R +NRWTS+LKSRLNCS+PGDFPFYFDEI+
Sbjct: 143 CKWDKGGPSRLKNRWTSYLKSRLNCSMPGDFPFYFDEIR 181
>gi|357603515|gb|EHJ63811.1| semaphorin-1a-like protein [Danaus plexippus]
Length = 659
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 93/99 (93%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
M+PIIYREPLQTE YDSM+LNAP+FV+SL G+FVYFFFRETAVE+INCGKAV+SRVARV
Sbjct: 89 MEPIIYREPLQTEPYDSMTLNAPDFVNSLVHGNFVYFFFRETAVEYINCGKAVFSRVARV 148
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
C+ DRGGPHRF+ RWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 149 CRDDRGGPHRFKQRWTSFLKSRLNCSVAGDFPFYFNEIQ 187
>gi|321458803|gb|EFX69865.1| hypothetical protein DAPPUDRAFT_328717 [Daphnia pulex]
Length = 666
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 90/99 (90%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
+DP+IY++PL+TEQYD LNAPNFVSS+ GD+VYFF RETAVE+INCGK VYSRVARV
Sbjct: 152 LDPLIYKDPLRTEQYDFKHLNAPNFVSSVADGDYVYFFLRETAVEYINCGKTVYSRVARV 211
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK D+GGPHR+ NRWTSFLKSRLNCS+PGDFPFYFDEIQ
Sbjct: 212 CKNDKGGPHRWSNRWTSFLKSRLNCSLPGDFPFYFDEIQ 250
>gi|321476899|gb|EFX87858.1| hypothetical protein DAPPUDRAFT_221078 [Daphnia pulex]
Length = 892
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 90/99 (90%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDP+IYREPL+TEQYD+ +LNAPNFVSS GD+VYF FRETAVE++NCGK VYSR+ARV
Sbjct: 120 MDPLIYREPLRTEQYDATNLNAPNFVSSFAHGDYVYFTFRETAVEYMNCGKTVYSRIARV 179
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK DRGGPH+FR RWTSFLKSRLNCSV GD+PFYF+EIQ
Sbjct: 180 CKSDRGGPHKFRYRWTSFLKSRLNCSVSGDYPFYFNEIQ 218
>gi|328716585|ref|XP_001952857.2| PREDICTED: semaphorin-1A-like [Acyrthosiphon pisum]
Length = 768
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
MDPIIY+E LQTEQYDS+SLNAP+FV S GDFVYFFFRETAVE+INCGK V+SRVARV
Sbjct: 186 MDPIIYKEQLQTEQYDSLSLNAPHFVHSFAHGDFVYFFFRETAVEYINCGKNVFSRVARV 245
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK DRGGP + +NRWTS+LKSRLNCSVPG+FPFYF+EIQ
Sbjct: 246 CKNDRGGPQQLKNRWTSYLKSRLNCSVPGEFPFYFNEIQ 284
>gi|237681147|ref|NP_001153720.1| semaphorin-1a [Tribolium castaneum]
gi|270015157|gb|EFA11605.1| semaphorin-1a-like protein [Tribolium castaneum]
Length = 724
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 69/98 (70%), Positives = 87/98 (88%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYREP +TE D LNAPNFV+S+ GD+++FF+RETAVE++NCGK +YSRVARVC
Sbjct: 195 DPLIYREPQRTELSDLKQLNAPNFVNSVAYGDYIFFFYRETAVEYMNCGKVIYSRVARVC 254
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K D+GGPH+ R+RWTSFLK+RLNCS+PG++PFYFDEIQ
Sbjct: 255 KDDKGGPHQSRDRWTSFLKARLNCSIPGEYPFYFDEIQ 292
>gi|8134678|sp|Q26473.1|SEM1A_SCHAM RecName: Full=Semaphorin-1A; AltName: Full=Fasciclin IV; AltName:
Full=Fasciclin-4; AltName: Full=Semaphorin-I; Short=Sema
I; Flags: Precursor
gi|160845|gb|AAA29808.1| fasciclin IV [Schistocerca americana]
Length = 730
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 89/98 (90%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYR PL+TE+ D LNAPNFV+++ DF++FFFRETAVE+INCGKA+YSRVARVC
Sbjct: 185 DPLIYRGPLRTERSDLKQLNAPNFVNTMEYNDFIFFFFRETAVEYINCGKAIYSRVARVC 244
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPH+F +RWTSFLKSRLNCSVPGD+PFYF+EIQ
Sbjct: 245 KHDKGGPHQFGDRWTSFLKSRLNCSVPGDYPFYFNEIQ 282
>gi|8134679|sp|Q26972.1|SEM1A_TRICF RecName: Full=Semaphorin-1A; AltName: Full=Semaphorin-I; Flags:
Precursor
gi|436568|gb|AAA16609.1| semaphorin-I [Tribolium confusum]
Length = 712
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 69/98 (70%), Positives = 87/98 (88%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYREP +TE D LNAPNFV+S+ GD+++FF+RETAVE++NCGK +YSRVARVC
Sbjct: 183 DPLIYREPQRTELSDLKQLNAPNFVNSVAYGDYIFFFYRETAVEYMNCGKVIYSRVARVC 242
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K D+GGPH+ R+RWTSFLK+RLNCS+PG++PFYFDEIQ
Sbjct: 243 KDDKGGPHQSRDRWTSFLKARLNCSIPGEYPFYFDEIQ 280
>gi|242005253|ref|XP_002423485.1| Semaphorin-1A precursor, putative [Pediculus humanus corporis]
gi|212506580|gb|EEB10747.1| Semaphorin-1A precursor, putative [Pediculus humanus corporis]
Length = 635
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 88/98 (89%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYREPL+TE+ D LN P+FVSS+ D+V+FFFRETAVE++NCGK VYSRVARVC
Sbjct: 113 DPLIYREPLRTERSDLKQLNGPSFVSSVAYEDYVFFFFRETAVEYMNCGKKVYSRVARVC 172
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPH+F +RWTSFLKSRLNCSVPGD+PFYFDEIQ
Sbjct: 173 KHDKGGPHQFGDRWTSFLKSRLNCSVPGDYPFYFDEIQ 210
>gi|345482246|ref|XP_001607258.2| PREDICTED: semaphorin-1A-like [Nasonia vitripennis]
Length = 953
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 88/98 (89%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+I+RE ++TE+ D LN PNFVSS T GD+VYFF+RETAVE++NCGKAVYSRVARVC
Sbjct: 167 EPLIHREKIRTERSDLNQLNGPNFVSSFTYGDYVYFFYRETAVEYMNCGKAVYSRVARVC 226
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPH F +RWTSFLK+RLNCSVPGD+PFYF+EIQ
Sbjct: 227 KHDKGGPHAFGDRWTSFLKARLNCSVPGDYPFYFNEIQ 264
>gi|157133916|ref|XP_001663071.1| semaphorin [Aedes aegypti]
gi|108881440|gb|EAT45665.1| AAEL003063-PA [Aedes aegypti]
Length = 776
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 68/98 (69%), Positives = 83/98 (84%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYREP +TEQYDS LN P FVS++ +V FFFRE AVE++NCGKA+YSRV+RVC
Sbjct: 185 DPLIYREPQRTEQYDSKQLNQPAFVSAVEHNGYVLFFFREVAVEYMNCGKAIYSRVSRVC 244
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K D+GGPH +RWTSFLK+RLNCS+PG++PFYFDEIQ
Sbjct: 245 KNDKGGPHPLNDRWTSFLKARLNCSIPGEYPFYFDEIQ 282
>gi|328707579|ref|XP_001944597.2| PREDICTED: semaphorin-1A-like [Acyrthosiphon pisum]
Length = 713
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 87/98 (88%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP++Y+EP++TE+ D LN PNFVSSL D+++FFFRE AVE+INCGK +YSRVARVC
Sbjct: 190 DPLVYKEPMRTERLDFKQLNDPNFVSSLEYKDYIFFFFREIAVEYINCGKTIYSRVARVC 249
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K+D+GGPH +R+RWTSFLK+RLNCS+PG++PFYFDEIQ
Sbjct: 250 KHDKGGPHSYRDRWTSFLKARLNCSMPGEYPFYFDEIQ 287
>gi|391335243|ref|XP_003742005.1| PREDICTED: semaphorin-1A-like [Metaseiulus occidentalis]
Length = 737
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 86/98 (87%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYR+PL+TEQ+D LNAP FVSS+ G VYFFFRE+AVEFINCGKA+YSRVARVC
Sbjct: 196 DPLIYRKPLRTEQFDLKHLNAPQFVSSMHIGSHVYFFFRESAVEFINCGKAIYSRVARVC 255
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
D+GGPH+F+ R+TSFLK+RLNCS+PGD PFYF+E+Q
Sbjct: 256 TNDQGGPHKFKERFTSFLKARLNCSIPGDMPFYFNELQ 293
>gi|427792355|gb|JAA61629.1| Putative semaphorin, partial [Rhipicephalus pulchellus]
Length = 741
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 85/98 (86%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYR+PL+TE +D LNAPNFVSS+ D+VYFFFRE+AVE+INCGK VYSRVARVC
Sbjct: 220 DPLIYRKPLRTEPFDLKHLNAPNFVSSIHYEDYVYFFFRESAVEYINCGKTVYSRVARVC 279
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
D+GGPH+F+ RWTSFLK+RLNCSV GD PFYF+EIQ
Sbjct: 280 TRDKGGPHKFQQRWTSFLKARLNCSVGGDIPFYFNEIQ 317
>gi|170027624|ref|XP_001841697.1| semaphorin [Culex quinquefasciatus]
gi|167862267|gb|EDS25650.1| semaphorin [Culex quinquefasciatus]
Length = 747
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 83/98 (84%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYREP +TEQYDS LN P FVS++ +V FFFRE AVE++NCGKA+YSRV+RVC
Sbjct: 157 DPLIYREPQRTEQYDSKQLNQPAFVSAVEHNGYVLFFFREIAVEYMNCGKAIYSRVSRVC 216
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K D+GGPH +RWTSF+K+RLNCS+PG++PFYFDEIQ
Sbjct: 217 KNDKGGPHPLNDRWTSFVKARLNCSIPGEYPFYFDEIQ 254
>gi|198458928|ref|XP_001361193.2| GA19600 [Drosophila pseudoobscura pseudoobscura]
gi|198136514|gb|EAL25771.2| GA19600 [Drosophila pseudoobscura pseudoobscura]
Length = 774
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 69/98 (70%), Positives = 80/98 (81%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + FV FFFRE ++EF+N GKAVYSRVARVC
Sbjct: 212 DPLIYRENLRTEQYDLKQLNQPDFVGTIERKGFVLFFFRELSMEFMNFGKAVYSRVARVC 271
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPGDFPFYFDEIQ
Sbjct: 272 KNDRGGPYNHGKSWTSFLKARLNCSVPGDFPFYFDEIQ 309
>gi|195154988|ref|XP_002018389.1| GL17680 [Drosophila persimilis]
gi|194114185|gb|EDW36228.1| GL17680 [Drosophila persimilis]
Length = 773
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 69/98 (70%), Positives = 80/98 (81%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + FV FFFRE ++EF+N GKAVYSRVARVC
Sbjct: 211 DPLIYRENLRTEQYDLKQLNQPDFVGTIERKGFVLFFFRELSMEFMNFGKAVYSRVARVC 270
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPGDFPFYFDEIQ
Sbjct: 271 KNDRGGPYNHGKSWTSFLKARLNCSVPGDFPFYFDEIQ 308
>gi|195487804|ref|XP_002092047.1| GE13973 [Drosophila yakuba]
gi|194178148|gb|EDW91759.1| GE13973 [Drosophila yakuba]
Length = 770
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/98 (69%), Positives = 80/98 (81%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + FV FFFRE ++EF+N GKAVYSRVARVC
Sbjct: 207 DPLIYRENLRTEQYDLKQLNQPDFVGAIERNGFVLFFFRELSMEFMNFGKAVYSRVARVC 266
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPG+FPFYFDEIQ
Sbjct: 267 KNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQ 304
>gi|312370919|gb|EFR19219.1| hypothetical protein AND_22880 [Anopheles darlingi]
Length = 899
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/98 (64%), Positives = 82/98 (83%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
D +IYRE +TE YDS LN P FVS++ +V FFFRE A+E++NCGKA+YSRVARVC
Sbjct: 302 DALIYRETQRTEHYDSKQLNQPAFVSAIEHNGYVMFFFREVAIEYMNCGKAIYSRVARVC 361
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K D+GGP+ F++RWTS+LK+RLNCS+PG++PFYFDE+Q
Sbjct: 362 KNDKGGPYPFQDRWTSYLKARLNCSIPGEYPFYFDELQ 399
>gi|241702926|ref|XP_002411954.1| Semaphorin-1A, putative [Ixodes scapularis]
gi|215504929|gb|EEC14423.1| Semaphorin-1A, putative [Ixodes scapularis]
Length = 733
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 83/98 (84%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+I+R PL+TE D LNAPNFVSS+ D+VYFFFRE+AVE+INCGK VYSRVARVC
Sbjct: 183 DPLIHRRPLRTEPSDLKHLNAPNFVSSIYFEDYVYFFFRESAVEYINCGKTVYSRVARVC 242
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
D+GGPH+F+ RWTSFLK+RLNCSV GD PFYF+EIQ
Sbjct: 243 TRDKGGPHKFQQRWTSFLKARLNCSVGGDIPFYFNEIQ 280
>gi|194880807|ref|XP_001974553.1| GG21030 [Drosophila erecta]
gi|190657740|gb|EDV54953.1| GG21030 [Drosophila erecta]
Length = 769
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 68/98 (69%), Positives = 80/98 (81%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + FV FFFRE ++EF+N GKAVYSRVARVC
Sbjct: 207 DPLIYRENLRTEQYDLKQLNQPDFVGAIERNGFVLFFFRELSMEFMNFGKAVYSRVARVC 266
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPG+FPFYFDEIQ
Sbjct: 267 KNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQ 304
>gi|194755813|ref|XP_001960174.1| GF13235 [Drosophila ananassae]
gi|190621472|gb|EDV36996.1| GF13235 [Drosophila ananassae]
Length = 753
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 67/98 (68%), Positives = 80/98 (81%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + FV FFFRE ++EF+N GKAVYSRVARVC
Sbjct: 194 DPLIYRENLRTEQYDLKQLNQPDFVGAIEKNGFVLFFFRELSMEFMNFGKAVYSRVARVC 253
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K D+GGP+ WT+FLK+RLNCSVPGDFPFYFDEIQ
Sbjct: 254 KNDKGGPYNHGKSWTTFLKARLNCSVPGDFPFYFDEIQ 291
>gi|350413728|ref|XP_003490090.1| PREDICTED: semaphorin-1A-like [Bombus impatiens]
Length = 954
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 85/98 (86%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+I+RE ++TE+ D LN PNFVSS D+V+FF+RETAVE++NCGKAVYSRV RVC
Sbjct: 184 EPLIHREKIRTERSDLNQLNGPNFVSSFAYEDYVFFFYRETAVEYMNCGKAVYSRVGRVC 243
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++D+GGPH F +RWTSFLK+RLNCSVPG++PFYF+EIQ
Sbjct: 244 QHDKGGPHAFSDRWTSFLKARLNCSVPGEYPFYFNEIQ 281
>gi|340710050|ref|XP_003393611.1| PREDICTED: semaphorin-1A-like [Bombus terrestris]
Length = 953
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 85/98 (86%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+I+RE ++TE+ D LN PNFVSS D+V+FF+RETAVE++NCGKAVYSRV RVC
Sbjct: 184 EPLIHREKIRTERSDLNQLNGPNFVSSFAYEDYVFFFYRETAVEYMNCGKAVYSRVGRVC 243
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++D+GGPH F +RWTSFLK+RLNCSVPG++PFYF+EIQ
Sbjct: 244 QHDKGGPHAFSDRWTSFLKARLNCSVPGEYPFYFNEIQ 281
>gi|307200628|gb|EFN80745.1| Semaphorin-1A [Harpegnathos saltator]
Length = 803
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 85/98 (86%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+I+RE ++TE+ D LN PNFVSS D+V+FF+RETAVE++NCGKAVYSRV RVC
Sbjct: 36 EPLIHREKIRTERSDLNQLNGPNFVSSFAYQDYVFFFYRETAVEYMNCGKAVYSRVGRVC 95
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++D+GGPH F +RWTSFLK+RLNCSVPG++PFYF+EIQ
Sbjct: 96 QHDKGGPHAFSDRWTSFLKARLNCSVPGEYPFYFNEIQ 133
>gi|307178630|gb|EFN67280.1| Semaphorin-1A [Camponotus floridanus]
Length = 772
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 85/98 (86%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+I+RE ++TE+ D LN PNFVSS D+V+FF+RETAVE++NCGKAVYSRV RVC
Sbjct: 20 EPLIHREKIRTERSDLNQLNGPNFVSSFAYQDYVFFFYRETAVEYMNCGKAVYSRVGRVC 79
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++D+GGPH F +RWTSFLK+RLNCSVPG++PFYF+EIQ
Sbjct: 80 QHDKGGPHAFSDRWTSFLKARLNCSVPGEYPFYFNEIQ 117
>gi|195123195|ref|XP_002006093.1| GI18743 [Drosophila mojavensis]
gi|193911161|gb|EDW10028.1| GI18743 [Drosophila mojavensis]
Length = 782
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/98 (67%), Positives = 79/98 (80%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + FV FFFRE ++E++N GKAVYSRV RVC
Sbjct: 216 DPLIYRENLRTEQYDLKQLNQPDFVGAIERNGFVLFFFRELSMEYMNFGKAVYSRVGRVC 275
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPG+FPFYFDEIQ
Sbjct: 276 KNDRGGPYNHAKSWTSFLKTRLNCSVPGEFPFYFDEIQ 313
>gi|322782994|gb|EFZ10712.1| hypothetical protein SINV_80445 [Solenopsis invicta]
Length = 776
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 85/98 (86%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+I+RE ++TE+ D LN PNFVSS D+V+FF+RETAVE++NCGK+VYSRV RVC
Sbjct: 23 EPLIHREKIRTERSDLNQLNGPNFVSSFAYQDYVFFFYRETAVEYMNCGKSVYSRVGRVC 82
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++D+GGPH F +RWTSFLK+RLNCSVPG++PFYF+EIQ
Sbjct: 83 QHDKGGPHAFSDRWTSFLKARLNCSVPGEYPFYFNEIQ 120
>gi|195431764|ref|XP_002063898.1| GK15918 [Drosophila willistoni]
gi|194159983|gb|EDW74884.1| GK15918 [Drosophila willistoni]
Length = 775
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/98 (67%), Positives = 80/98 (81%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + +V FFFRE ++EF+N GKAVYSRVARVC
Sbjct: 208 DPLIYRENLRTEQYDLKQLNQPDFVGTIERKGYVLFFFRELSMEFMNFGKAVYSRVARVC 267
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCS+PG+FPFYFDEIQ
Sbjct: 268 KNDRGGPYNHGKSWTSFLKARLNCSMPGEFPFYFDEIQ 305
>gi|195382057|ref|XP_002049749.1| GJ21763 [Drosophila virilis]
gi|194144546|gb|EDW60942.1| GJ21763 [Drosophila virilis]
Length = 757
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/98 (67%), Positives = 79/98 (80%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + +V FFFRE ++EF+N GKAVYSRV RVC
Sbjct: 191 DPLIYRETLRTEQYDLKQLNQPDFVGAIERNGYVLFFFRELSMEFMNFGKAVYSRVGRVC 250
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPG+FPFYFDEIQ
Sbjct: 251 KNDRGGPYNHGKSWTSFLKARLNCSVPGEFPFYFDEIQ 288
>gi|380014169|ref|XP_003691112.1| PREDICTED: semaphorin-1A-like, partial [Apis florea]
Length = 775
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 85/98 (86%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+I+R+ ++TE+ D LN PNFVSS D+V+FF+RETAVE++NCGKAVYSRV RVC
Sbjct: 15 EPLIHRDKIRTERSDLNQLNGPNFVSSFAYEDYVFFFYRETAVEYMNCGKAVYSRVGRVC 74
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++D+GGPH F +RWTSFLK+RLNCSVPG++PFYF+EIQ
Sbjct: 75 QHDKGGPHAFNDRWTSFLKARLNCSVPGEYPFYFNEIQ 112
>gi|328778122|ref|XP_003249452.1| PREDICTED: semaphorin-1A-like [Apis mellifera]
Length = 952
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 85/98 (86%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+I+R+ ++TE+ D LN PNFVSS D+V+FF+RETAVE++NCGKAVYSRV RVC
Sbjct: 184 EPLIHRDKIRTERSDLNQLNGPNFVSSFAYEDYVFFFYRETAVEYMNCGKAVYSRVGRVC 243
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++D+GGPH F +RWTSFLK+RLNCSVPG++PFYF+EIQ
Sbjct: 244 QHDKGGPHAFNDRWTSFLKARLNCSVPGEYPFYFNEIQ 281
>gi|2852642|gb|AAC19159.1| similar to semaphorin-I [Drosophila melanogaster]
Length = 770
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 66/98 (67%), Positives = 79/98 (80%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + +V FFFRE ++E +N GKAVYSRVARVC
Sbjct: 207 DPLIYRENLRTEQYDLKQLNQPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVC 266
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPG+FPFYFDEIQ
Sbjct: 267 KNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQ 304
>gi|19922466|ref|NP_611244.1| Sema-1b, isoform A [Drosophila melanogaster]
gi|45552709|ref|NP_995879.1| Sema-1b, isoform B [Drosophila melanogaster]
gi|281363577|ref|NP_001163178.1| Sema-1b, isoform C [Drosophila melanogaster]
gi|5901806|gb|AAD55411.1|AF181625_1 semaphorin-like [Drosophila melanogaster]
gi|7302738|gb|AAF57816.1| Sema-1b, isoform A [Drosophila melanogaster]
gi|45445491|gb|AAS64817.1| Sema-1b, isoform B [Drosophila melanogaster]
gi|220943646|gb|ACL84366.1| Sema-1b-PA [synthetic construct]
gi|229462534|gb|ACQ66050.1| MIP07328p [Drosophila melanogaster]
gi|272432525|gb|ACZ94450.1| Sema-1b, isoform C [Drosophila melanogaster]
Length = 770
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 66/98 (67%), Positives = 79/98 (80%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + +V FFFRE ++E +N GKAVYSRVARVC
Sbjct: 207 DPLIYRENLRTEQYDLKQLNQPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVC 266
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPG+FPFYFDEIQ
Sbjct: 267 KNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQ 304
>gi|195335324|ref|XP_002034324.1| GM19960 [Drosophila sechellia]
gi|194126294|gb|EDW48337.1| GM19960 [Drosophila sechellia]
Length = 770
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 66/98 (67%), Positives = 79/98 (80%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + +V FFFRE ++E +N GKAVYSRVARVC
Sbjct: 207 DPLIYRENLRTEQYDLKQLNQPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVC 266
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPG+FPFYFDEIQ
Sbjct: 267 KNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQ 304
>gi|195584315|ref|XP_002081959.1| GD25452 [Drosophila simulans]
gi|194193968|gb|EDX07544.1| GD25452 [Drosophila simulans]
Length = 579
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 66/98 (67%), Positives = 79/98 (80%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + +V FFFRE ++E +N GKAVYSRVARVC
Sbjct: 207 DPLIYRENLRTEQYDLKQLNQPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVC 266
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCSVPG+FPFYFDEIQ
Sbjct: 267 KNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQ 304
>gi|357622029|gb|EHJ73649.1| Semaphorin-1A [Danaus plexippus]
Length = 602
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 82/99 (82%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+IYREP++TE D LN P+FV ++ VYFF+RETAVE++NCGK+VYSRVARVC
Sbjct: 34 EPLIYREPVRTEHSDLRLLNDPSFVGAVASTSHVYFFYRETAVEYMNCGKSVYSRVARVC 93
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
D+GGPH F +RWTSFLK+RLNCS+PG++PFYFDEIQ
Sbjct: 94 LNDKGGPHPFNDRWTSFLKARLNCSIPGEYPFYFDEIQA 132
>gi|307173151|gb|EFN64251.1| Semaphorin-1A [Camponotus floridanus]
Length = 738
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 77/90 (85%), Gaps = 12/90 (13%)
Query: 22 APNFVSSLTQGDFVYFFFRETAVEFINCGK------------AVYSRVARVCKYDRGGPH 69
APNFV+S++QGDFVYFFFRETAVE+INCGK AVYSRVARVCKYDRGGPH
Sbjct: 167 APNFVNSMSQGDFVYFFFRETAVEYINCGKCNLPRWRSLHSQAVYSRVARVCKYDRGGPH 226
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RFRNRWTSFLKSRLNCSV GDFPFYF+EIQ
Sbjct: 227 RFRNRWTSFLKSRLNCSVTGDFPFYFNEIQ 256
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 1 MDPIIYREPLQTEQYDSMSLNA 22
MDPIIYREPLQTEQYDSMSLNA
Sbjct: 89 MDPIIYREPLQTEQYDSMSLNA 110
>gi|195025279|ref|XP_001986034.1| GH21142 [Drosophila grimshawi]
gi|193902034|gb|EDW00901.1| GH21142 [Drosophila grimshawi]
Length = 762
Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 64/98 (65%), Positives = 80/98 (81%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYRE L+TEQYD LN P+FV ++ + +V+FFFRE ++E++N GKAVYSRV RVC
Sbjct: 197 DPLIYRENLRTEQYDLKQLNQPDFVGAIQRNGYVFFFFRELSMEYMNFGKAVYSRVGRVC 256
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGGP+ WTSFLK+RLNCS+PG+FPFYFDEIQ
Sbjct: 257 KNDRGGPYNHGKSWTSFLKARLNCSMPGEFPFYFDEIQ 294
>gi|332016562|gb|EGI57443.1| Semaphorin-1A [Acromyrmex echinatior]
Length = 772
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 85/98 (86%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+I+R+ ++TE+ D LN PNFVS+ D+V+FF+RETAVE++NCGK+VYSRV RVC
Sbjct: 20 EPLIHRDKIRTERSDLNQLNGPNFVSTFAYQDYVFFFYRETAVEYMNCGKSVYSRVGRVC 79
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++D+GGPH F +RWTSFLK+RLNCSVPG++PFYF+EIQ
Sbjct: 80 QHDKGGPHAFSDRWTSFLKARLNCSVPGEYPFYFNEIQ 117
>gi|158294687|ref|XP_315755.4| AGAP005742-PB [Anopheles gambiae str. PEST]
gi|157015681|gb|EAA10953.4| AGAP005742-PB [Anopheles gambiae str. PEST]
Length = 766
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 84/99 (84%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
D +IYREP +TEQ+DS LN P FVS++ +V FF+RE A+E++NCGKA+YSRV+RVC
Sbjct: 172 DALIYREPQRTEQFDSKQLNQPAFVSAIEYNGYVMFFYREVAMEYMNCGKAIYSRVSRVC 231
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
K D+GGP+ F+++WTSFLK+RLNCS+PG++PFYFDE+Q
Sbjct: 232 KNDKGGPYPFQDKWTSFLKARLNCSIPGEYPFYFDELQA 270
>gi|158294685|ref|XP_001688723.1| AGAP005742-PA [Anopheles gambiae str. PEST]
gi|157015680|gb|EDO63729.1| AGAP005742-PA [Anopheles gambiae str. PEST]
Length = 769
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 84/99 (84%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
D +IYREP +TEQ+DS LN P FVS++ +V FF+RE A+E++NCGKA+YSRV+RVC
Sbjct: 172 DALIYREPQRTEQFDSKQLNQPAFVSAIEYNGYVMFFYREVAMEYMNCGKAIYSRVSRVC 231
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
K D+GGP+ F+++WTSFLK+RLNCS+PG++PFYFDE+Q
Sbjct: 232 KNDKGGPYPFQDKWTSFLKARLNCSIPGEYPFYFDELQA 270
>gi|357622027|gb|EHJ73647.1| Semaphorin-1A [Danaus plexippus]
Length = 283
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 82/98 (83%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
+P+IYREP++TE D LN P+FV ++ VYFF+RETAVE++NCGK+VYSRVARVC
Sbjct: 180 EPLIYREPVRTEHSDLRLLNDPSFVGAVASTSHVYFFYRETAVEYMNCGKSVYSRVARVC 239
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
D+GGPH F +RWTSFLK+RLNCS+PG++PFYFDEI+
Sbjct: 240 LNDKGGPHPFNDRWTSFLKARLNCSIPGEYPFYFDEIR 277
>gi|213159346|ref|YP_002321389.1| semaphorin-like protein [Oryctes rhinoceros virus]
gi|202073532|gb|ACH96208.1| semaphorin-like protein [Oryctes rhinoceros virus]
Length = 420
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 80/96 (83%)
Query: 4 IIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKY 63
IIYR+P +TE ++ LNA NFV+SL +V+FF+RE AVE INCGK +YSRVARVCK
Sbjct: 44 IIYRKPQRTEFFNLEQLNAANFVASLAFNGYVFFFYREVAVEHINCGKTIYSRVARVCKN 103
Query: 64 DRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
D GGPHR+ ++WTSFLK+RLNCSVPG+FPFYFDE+Q
Sbjct: 104 DHGGPHRYSDKWTSFLKTRLNCSVPGEFPFYFDELQ 139
>gi|332029263|gb|EGI69246.1| Semaphorin-5B [Acromyrmex echinatior]
Length = 1042
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 64/102 (62%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 2 DPIIYRE----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRV 57
DP IYR L+T QYDSM LN P FV S D VYF FRE+AVE+INCGK +YSR+
Sbjct: 136 DPAIYRTLASPNLRTRQYDSMWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRI 195
Query: 58 ARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK DRGG ++ WT+F K+RLNCS+PG+FPFY+DEIQ
Sbjct: 196 ARVCKNDRGGQIMMKDVWTTFSKARLNCSLPGEFPFYYDEIQ 237
>gi|223929910|gb|ACN24613.1| semaphorin precursor [Hirudo medicinalis]
Length = 583
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
D +I+ +PL+TE +DS LN P+FVSS + GD +YFFFRETAVE INCGK V+SRVARVC
Sbjct: 200 DALIFSKPLRTEHHDSKWLNDPSFVSSFSYGDRIYFFFRETAVENINCGKVVFSRVARVC 259
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
D GG RN WTSF K RLNCS+PG+FPFYFDEIQ
Sbjct: 260 ANDSGGQRVLRNTWTSFSKVRLNCSLPGEFPFYFDEIQ 297
>gi|260799260|ref|XP_002594615.1| hypothetical protein BRAFLDRAFT_279857 [Branchiostoma floridae]
gi|229279850|gb|EEN50626.1| hypothetical protein BRAFLDRAFT_279857 [Branchiostoma floridae]
Length = 452
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 83/108 (76%), Gaps = 9/108 (8%)
Query: 2 DPIIYR-----EP----LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
D +IYR EP L+TEQYDS LN P+F+ S G+ V+FFF+ETAVE+INCGK
Sbjct: 116 DTVIYRSLGYSEPYDPTLKTEQYDSKWLNEPSFIKSFEHGNKVFFFFKETAVEYINCGKT 175
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
+YSRVARVCK D+GG +NRWT+++K+RLNCSVPG++PFYFDEIQ
Sbjct: 176 IYSRVARVCKDDQGGQRVLQNRWTTYMKARLNCSVPGEYPFYFDEIQA 223
>gi|391335245|ref|XP_003742006.1| PREDICTED: semaphorin-1A-like [Metaseiulus occidentalis]
Length = 706
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
DP+IYR+PL+TEQ D LNAP FVSS+ G VYFFFRETA+E++NCGKA+YSRVARVC
Sbjct: 164 DPMIYRDPLRTEQNDLRILNAPQFVSSMHIGSHVYFFFRETAIEYLNCGKAIYSRVARVC 223
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
D G R + ++TSFLK+RLNCS+PGD PFYF+E+Q
Sbjct: 224 TNDEGISDRNK-KFTSFLKARLNCSIPGDIPFYFNELQ 260
>gi|443714202|gb|ELU06726.1| hypothetical protein CAPTEDRAFT_179561 [Capitella teleta]
Length = 542
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 78/98 (79%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
D +IY + ++T Q+DS LN P+FVSS D VYFFFRETAVE+INCGKA +SRVARVC
Sbjct: 146 DALIYSDSVRTVQHDSQWLNEPDFVSSFEHEDKVYFFFRETAVEYINCGKARFSRVARVC 205
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K DRGG RN +TSF K+RLNCS+PG++PFYFDEIQ
Sbjct: 206 KNDRGGERMLRNTFTSFFKARLNCSIPGEYPFYFDEIQ 243
>gi|242014732|ref|XP_002428039.1| Semaphorin-5A precursor, putative [Pediculus humanus corporis]
gi|212512558|gb|EEB15301.1| Semaphorin-5A precursor, putative [Pediculus humanus corporis]
Length = 1017
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 59/92 (64%), Positives = 72/92 (78%)
Query: 8 EPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGG 67
+PL+T Q+DS LN P FV S FV+F FRE AVE+INCGK VYSR+ARVCK D GG
Sbjct: 137 QPLRTNQFDSKWLNEPQFVGSFETDKFVFFLFREAAVEYINCGKIVYSRIARVCKNDEGG 196
Query: 68 PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+++WT+FLK+RLNCS+PGD+PFYFDEIQ
Sbjct: 197 QLLLKDKWTTFLKARLNCSLPGDYPFYFDEIQ 228
>gi|322784361|gb|EFZ11332.1| hypothetical protein SINV_00893 [Solenopsis invicta]
Length = 1147
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 63/102 (61%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 2 DPIIYRE----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRV 57
DP IYR L+T QYDS LN P FV S D VYF FRE+AVE+INCGK +YSR+
Sbjct: 227 DPAIYRTLASPNLRTRQYDSKWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRI 286
Query: 58 ARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK DRGG ++ WT+F K+RLNCS+PG+FPFY+DEIQ
Sbjct: 287 ARVCKNDRGGQIMMKDVWTTFSKARLNCSLPGEFPFYYDEIQ 328
>gi|157116984|ref|XP_001652919.1| semaphorin [Aedes aegypti]
gi|108876241|gb|EAT40466.1| AAEL007804-PA, partial [Aedes aegypti]
Length = 1026
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/106 (57%), Positives = 75/106 (70%), Gaps = 8/106 (7%)
Query: 2 DPIIYREP--------LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAV 53
DP I R L+T QY+S LN P FV S G+FVYF FRE AVE+INCGK V
Sbjct: 115 DPAILRADVTQEGSRMLRTNQYNSKWLNDPQFVGSFEHGEFVYFVFREAAVEYINCGKIV 174
Query: 54 YSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
YSR+AR+CK D GG ++ WTSF+K+RLNCS+PGD+PFYF+E+Q
Sbjct: 175 YSRIARICKNDPGGTQILKDNWTSFVKARLNCSLPGDYPFYFNEVQ 220
>gi|405962655|gb|EKC28312.1| Semaphorin-1A [Crassostrea gigas]
Length = 690
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 76/103 (73%), Gaps = 5/103 (4%)
Query: 2 DPIIYREP-----LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+I+ L+TEQ+DS LN PNFV S D +YFFFRETAVE INCGK V+SR
Sbjct: 113 DPLIFSTSNGPSGLRTEQHDSKWLNDPNFVGSFDIKDKIYFFFRETAVEHINCGKTVFSR 172
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK DRGG ++ WTSF K+RLNCS+PG++PFY DEIQ
Sbjct: 173 VARICKNDRGGQIMMKSIWTSFFKARLNCSIPGEYPFYLDEIQ 215
>gi|170053966|ref|XP_001862914.1| semaphorin [Culex quinquefasciatus]
gi|167874384|gb|EDS37767.1| semaphorin [Culex quinquefasciatus]
Length = 1231
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 76/106 (71%), Gaps = 8/106 (7%)
Query: 2 DPIIYREP--------LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAV 53
DP I R L+T QY+S LN P FV S +G+FVYF FRE AVE+INCGK V
Sbjct: 125 DPAIIRADVSQESARMLRTNQYNSKWLNDPQFVGSFEKGEFVYFLFREAAVEYINCGKIV 184
Query: 54 YSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
YSR+AR+CK D GG ++ WTSF+K+RLNCS+PGD+PFYF+EIQ
Sbjct: 185 YSRIARICKNDPGGTQILKDNWTSFVKARLNCSLPGDYPFYFNEIQ 230
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 54/106 (50%), Gaps = 36/106 (33%)
Query: 2 DPIIYREP--------LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAV 53
DP I R L+T QY+S LN P FV S +G+FVYF FRE AVE+INCGK V
Sbjct: 363 DPAIIRADVSQESARMLRTNQYNSKWLNDPQFVGSFEKGEFVYFLFREAAVEYINCGKIV 422
Query: 54 YSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++CS+PGD+PFYF+EIQ
Sbjct: 423 A----------------------------VDCSLPGDYPFYFNEIQ 440
>gi|328783402|ref|XP_394067.3| PREDICTED: semaphorin-5A [Apis mellifera]
Length = 1107
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Query: 2 DPIIYRE----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRV 57
DP I R L+T QYDS LN P FV S D VYF FRE+AVE+INCGK +YSR+
Sbjct: 199 DPAICRTLASPNLRTHQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRI 258
Query: 58 ARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK DRGG R WT+F K+RLNCS+PG+FPFY+DEIQ
Sbjct: 259 ARVCKNDRGGQIMMREVWTTFSKARLNCSLPGEFPFYYDEIQ 300
>gi|427788923|gb|JAA59913.1| Putative semaphorin [Rhipicephalus pulchellus]
Length = 704
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
++T +YDSM L+ PNFV S GD V+FFFRE+AVE+INCGK +YSRVARVCK D GG +
Sbjct: 212 MRTLKYDSMWLDKPNFVGSFDIGDHVFFFFRESAVEYINCGKVIYSRVARVCKKDTGGKN 271
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
+ W +FLK+RLNCS+PG++PFYF+EIQ
Sbjct: 272 ILTHNWATFLKARLNCSLPGEYPFYFNEIQA 302
>gi|195384291|ref|XP_002050851.1| GJ22377 [Drosophila virilis]
gi|194145648|gb|EDW62044.1| GJ22377 [Drosophila virilis]
Length = 701
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GD+VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 218 RTLKYDSKWLDKPNFVGSFDIGDYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 277
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 278 LAHNWATYLKARLNCSISGEFPFYFNEIQ 306
>gi|340725614|ref|XP_003401163.1| PREDICTED: semaphorin-5A-like [Bombus terrestris]
Length = 1113
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Query: 2 DPIIYRE----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRV 57
DP I R L+T QYDS LN P FV S D VYF FRE+AVE+INCGK VYSR+
Sbjct: 204 DPAICRTLASPNLRTHQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKVYSRI 263
Query: 58 ARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK DRGG + WT+F K+RLNCS+PG+FPFY+DEIQ
Sbjct: 264 ARVCKNDRGGKIMMKEVWTTFSKARLNCSLPGEFPFYYDEIQ 305
>gi|350404059|ref|XP_003486993.1| PREDICTED: semaphorin-5A-like [Bombus impatiens]
Length = 1120
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Query: 2 DPIIYRE----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRV 57
DP I R L+T QYDS LN P FV S D VYF FRE+AVE+INCGK VYSR+
Sbjct: 211 DPAICRTLASPNLRTHQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKVYSRI 270
Query: 58 ARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK DRGG + WT+F K+RLNCS+PG+FPFY+DEIQ
Sbjct: 271 ARVCKNDRGGKIMMKEVWTTFSKARLNCSLPGEFPFYYDEIQ 312
>gi|198456785|ref|XP_002138304.1| GA24470 [Drosophila pseudoobscura pseudoobscura]
gi|198135748|gb|EDY68862.1| GA24470 [Drosophila pseudoobscura pseudoobscura]
Length = 722
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GD+VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 239 RTLKYDSKWLDKPNFVGSFDIGDYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 298
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 299 LAHNWATYLKARLNCSISGEFPFYFNEIQ 327
>gi|321469350|gb|EFX80330.1| hypothetical protein DAPPUDRAFT_51392 [Daphnia pulex]
Length = 771
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GD+VYFFFRETAVE+INCGK VYSRVARVCK D GG +
Sbjct: 278 RTLKYDSKWLDKPNFVGSYDIGDYVYFFFRETAVEYINCGKNVYSRVARVCKKDNGGKNI 337
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
W +FLK+RLNCS+PG+FPFYF+EI+
Sbjct: 338 LSQNWATFLKARLNCSIPGEFPFYFNEIRT 367
>gi|195122104|ref|XP_002005552.1| GI20528 [Drosophila mojavensis]
gi|193910620|gb|EDW09487.1| GI20528 [Drosophila mojavensis]
Length = 720
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GD+VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 237 RTLKYDSKWLDKPNFVGSFDIGDYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 296
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 297 LAHNWATYLKARLNCSISGEFPFYFNEIQ 325
>gi|195150031|ref|XP_002015958.1| GL10746 [Drosophila persimilis]
gi|194109805|gb|EDW31848.1| GL10746 [Drosophila persimilis]
Length = 658
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GD+VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 239 RTLKYDSKWLDKPNFVGSFDIGDYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 298
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 299 LAHNWATYLKARLNCSISGEFPFYFNEIQ 327
>gi|195089576|ref|XP_001997484.1| GH23279 [Drosophila grimshawi]
gi|193906008|gb|EDW04875.1| GH23279 [Drosophila grimshawi]
Length = 850
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/90 (61%), Positives = 70/90 (77%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ LN FV S G+FVYF RE+A E ++CGKA+YSR+ARVCK D GG
Sbjct: 7 LRTKQYNNNWLNGAQFVGSFEAGNFVYFLLRESAAEHMSCGKAIYSRIARVCKNDAGGDQ 66
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
R+ WTSFLK+RLNCS+PGD+P+YFDEIQ
Sbjct: 67 VLRDNWTSFLKARLNCSLPGDYPYYFDEIQ 96
>gi|91077764|ref|XP_968340.1| PREDICTED: similar to semaphorin 2a [Tribolium castaneum]
Length = 724
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GD+V FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 238 RTLKYDSKWLDKPNFVGSFDIGDYVLFFFRETAVEYINCGKSVYSRVARVCKKDTGGKNI 297
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 298 LSQNWATYLKARLNCSIPGEFPFYFNEIQ 326
>gi|241119242|ref|XP_002402513.1| Semaphorin-2A, putative [Ixodes scapularis]
gi|215493310|gb|EEC02951.1| Semaphorin-2A, putative [Ixodes scapularis]
Length = 679
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 73/90 (81%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
++T +YDSM L+ PNFV S GD V+FFFRE+AVE+INCGK +YSRVARVCK D GG +
Sbjct: 185 MRTLKYDSMWLDKPNFVGSFDIGDHVFFFFRESAVEYINCGKVIYSRVARVCKKDTGGKN 244
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W +FLK+RLNCS+PG++PFYF+EIQ
Sbjct: 245 ILTHNWATFLKARLNCSLPGEYPFYFNEIQ 274
>gi|383860985|ref|XP_003705967.1| PREDICTED: semaphorin-5B [Megachile rotundata]
Length = 1103
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T QYDS LN P FV S D VYF FRE+AVE+INCGK +YSR+ARVCK DRGG
Sbjct: 195 LRTHQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRIARVCKNDRGGQI 254
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
R WT+F K+RLNCS+PG+FPFY+DEIQ
Sbjct: 255 MMREVWTTFSKARLNCSLPGEFPFYYDEIQ 284
>gi|380016324|ref|XP_003692137.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5A-like [Apis florea]
Length = 1087
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 4/102 (3%)
Query: 2 DPIIYRE----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRV 57
DP I R L+T QYDS LN P FV S D VYF FRE+AVE+INCGK +YSR+
Sbjct: 181 DPAICRTLASPNLRTHQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRI 240
Query: 58 ARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK DRGG R WT+F K+RLNC +PG+FPFY+DEIQ
Sbjct: 241 ARVCKNDRGGQIMMREVWTTFSKARLNCXLPGEFPFYYDEIQ 282
>gi|270002844|gb|EEZ99291.1| semaphorin-2a [Tribolium castaneum]
Length = 787
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GD+V FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 301 RTLKYDSKWLDKPNFVGSFDIGDYVLFFFRETAVEYINCGKSVYSRVARVCKKDTGGKNI 360
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 361 LSQNWATYLKARLNCSIPGEFPFYFNEIQ 389
>gi|195384275|ref|XP_002050843.1| GJ22373 [Drosophila virilis]
gi|194145640|gb|EDW62036.1| GJ22373 [Drosophila virilis]
Length = 744
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GDFVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 248 RTVKYDSKLLDKPNFVGSFEIGDFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 307
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 308 ISQNWATYLKARMNCSISSEFPFYFNEIQ 336
>gi|195122082|ref|XP_002005541.1| GI20523 [Drosophila mojavensis]
gi|193910609|gb|EDW09476.1| GI20523 [Drosophila mojavensis]
Length = 749
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GDFVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 244 RTVKYDSKLLDKPNFVGSFDIGDFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 303
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 304 ISQNWATYLKARMNCSISSEFPFYFNEIQ 332
>gi|170064517|ref|XP_001867558.1| semaphorin [Culex quinquefasciatus]
gi|167881888|gb|EDS45271.1| semaphorin [Culex quinquefasciatus]
Length = 627
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 144 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDTGGKNI 203
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 204 LNQNWATYLKARLNCSIAGEFPFYFNEIQ 232
>gi|195026254|ref|XP_001986216.1| GH21236 [Drosophila grimshawi]
gi|193902216|gb|EDW01083.1| GH21236 [Drosophila grimshawi]
Length = 735
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GDFVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 242 RTVKYDSKLLDKPNFVGSFDIGDFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 301
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 302 ISQNWATYLKARMNCSISSEFPFYFNEIQ 330
>gi|357610886|gb|EHJ67191.1| putative semaphorin 2a [Danaus plexippus]
Length = 631
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++V FFFRETAVE+INCGKAVYSRVAR+CK D GG +
Sbjct: 197 RTLKYDSKWLDKPNFVGSFDVGEYVLFFFRETAVEYINCGKAVYSRVARICKKDTGGKNI 256
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 257 LSQNWATYLKARLNCSIPGEFPFYFNEIQ 285
>gi|195026294|ref|XP_001986224.1| GH21241 [Drosophila grimshawi]
gi|193902224|gb|EDW01091.1| GH21241 [Drosophila grimshawi]
Length = 701
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 218 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 277
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 278 LAHNWATYLKARLNCSISGEFPFYFNEIQ 306
>gi|8134686|sp|Q9XZC8.1|SEM2A_SCHGR RecName: Full=Semaphorin-2A; Short=Sema-2A; AltName: Full=Sema II;
Flags: Precursor
gi|4809151|gb|AAD30114.1|AF134904_1 semaphorin 2a precursor [Schistocerca gregaria]
Length = 697
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++V FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 210 RTLKYDSKWLDNPNFVGSFDVGEYVLFFFRETAVEYINCGKSVYSRVARVCKKDVGGKNI 269
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W +FLK+RLNCS+PG+FPFYF+EIQ
Sbjct: 270 LSQNWATFLKARLNCSIPGEFPFYFNEIQ 298
>gi|391343223|ref|XP_003745912.1| PREDICTED: semaphorin-2A-like [Metaseiulus occidentalis]
Length = 674
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRE+AVE+INCGK+VYSRVAR+CK D GG +
Sbjct: 203 RTIKYDSKWLDRPNFVGSFDIGEYVYFFFRESAVEYINCGKSVYSRVARICKRDTGGKNI 262
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PGD+PFYF+EIQ
Sbjct: 263 LNKNWATYLKARLNCSIPGDYPFYFNEIQ 291
>gi|195334955|ref|XP_002034142.1| GM21705 [Drosophila sechellia]
gi|194126112|gb|EDW48155.1| GM21705 [Drosophila sechellia]
Length = 697
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 214 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 273
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 274 LAHNWATYLKARLNCSISGEFPFYFNEIQ 302
>gi|195488161|ref|XP_002092197.1| GE11800 [Drosophila yakuba]
gi|194178298|gb|EDW91909.1| GE11800 [Drosophila yakuba]
Length = 697
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 214 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 273
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 274 LAHNWATYLKARLNCSISGEFPFYFNEIQ 302
>gi|195583966|ref|XP_002081787.1| GD11202 [Drosophila simulans]
gi|194193796|gb|EDX07372.1| GD11202 [Drosophila simulans]
Length = 697
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 214 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 273
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 274 LAHNWATYLKARLNCSISGEFPFYFNEIQ 302
>gi|24654174|ref|NP_725586.1| Sema-2a, isoform C [Drosophila melanogaster]
gi|21627096|gb|AAM68500.1| Sema-2a, isoform C [Drosophila melanogaster]
Length = 697
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 214 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 273
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 274 LAHNWATYLKARLNCSISGEFPFYFNEIQ 302
>gi|194882491|ref|XP_001975344.1| GG20610 [Drosophila erecta]
gi|190658531|gb|EDV55744.1| GG20610 [Drosophila erecta]
Length = 697
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 214 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 273
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 274 LAHNWATYLKARLNCSISGEFPFYFNEIQ 302
>gi|41058083|gb|AAR99105.1| RE45189p [Drosophila melanogaster]
Length = 697
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 214 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 273
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 274 LAHNWATYLKARLNCSISGEFPFYFNEIQ 302
>gi|195429964|ref|XP_002063027.1| GK21702 [Drosophila willistoni]
gi|194159112|gb|EDW74013.1| GK21702 [Drosophila willistoni]
Length = 721
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 238 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 297
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 298 LAHNWATYLKARLNCSISGEFPFYFNEIQ 326
>gi|347967840|ref|XP_312521.5| AGAP002424-PA [Anopheles gambiae str. PEST]
gi|333468279|gb|EAA07529.5| AGAP002424-PA [Anopheles gambiae str. PEST]
Length = 1100
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 53/91 (58%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGG-P 68
L+T QY+S+ LN P F S G F+YF RE AVE++NCGK +YSR+ARVCK D GG P
Sbjct: 170 LRTVQYNSLWLNEPQFAGSFEHGGFIYFVLREAAVEYMNCGKIIYSRIARVCKNDAGGTP 229
Query: 69 HRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++ WTSF+K+RLNCS+PGD+PFY++E+Q
Sbjct: 230 GILKDNWTSFVKARLNCSLPGDYPFYYNEVQ 260
>gi|17137800|ref|NP_477507.1| Sema-2a, isoform A [Drosophila melanogaster]
gi|19549754|ref|NP_599130.1| Sema-2a, isoform B [Drosophila melanogaster]
gi|81175194|sp|Q24323.2|SEM2A_DROME RecName: Full=Semaphorin-2A; AltName: Full=Semaphorin-II;
Short=Sema II; Flags: Precursor
gi|7302917|gb|AAF57989.1| Sema-2a, isoform A [Drosophila melanogaster]
gi|7302918|gb|AAF57990.1| Sema-2a, isoform B [Drosophila melanogaster]
gi|20151989|gb|AAM11354.1| LD09561p [Drosophila melanogaster]
gi|21711679|gb|AAM75030.1| LD09306p [Drosophila melanogaster]
gi|220943556|gb|ACL84321.1| Sema-2a-PA [synthetic construct]
Length = 724
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 241 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 300
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 301 LAHNWATYLKARLNCSISGEFPFYFNEIQ 329
>gi|45552663|ref|NP_995856.1| Sema-2a, isoform D [Drosophila melanogaster]
gi|45445522|gb|AAS64837.1| Sema-2a, isoform D [Drosophila melanogaster]
Length = 701
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 218 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 277
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 278 LAHNWATYLKARLNCSISGEFPFYFNEIQ 306
>gi|195379490|ref|XP_002048511.1| GJ14011 [Drosophila virilis]
gi|194155669|gb|EDW70853.1| GJ14011 [Drosophila virilis]
Length = 1098
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 70/90 (77%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ LN FV S G+FVYF RE+A E ++CGKA+YSR+ARVCK D GG
Sbjct: 222 LRTKQYNTNWLNGAQFVGSFEAGNFVYFLLRESAAEHMSCGKAIYSRIARVCKNDAGGDQ 281
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
R+ WTSFLK+RLNCS+PGD+P+YFDEIQ
Sbjct: 282 VLRDNWTSFLKARLNCSLPGDYPYYFDEIQ 311
>gi|436557|gb|AAC37187.1| semaphorin-II [Drosophila melanogaster]
Length = 706
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 223 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 282
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 283 LAHNWATYLKARLNCSISGEFPFYFNEIQ 311
>gi|195173105|ref|XP_002027335.1| GL15685 [Drosophila persimilis]
gi|194113178|gb|EDW35221.1| GL15685 [Drosophila persimilis]
Length = 980
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 53/90 (58%), Positives = 69/90 (76%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ LN FV S G+FVYF RE+A E + CGKA+YSR+ARVCK D GG
Sbjct: 179 LRTKQYNNNWLNGAQFVGSFEAGNFVYFLLRESAAEHMTCGKAIYSRIARVCKNDAGGGQ 238
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
R+ WTSFLK+RLNCS+PG++P+YFDE+Q
Sbjct: 239 LLRDNWTSFLKARLNCSLPGEYPYYFDEVQ 268
>gi|224465291|gb|ACN43740.1| RT01502p [Drosophila melanogaster]
Length = 699
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 216 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 275
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 276 LAHNWATYLKARLNCSISGEFPFYFNEIQ 304
>gi|195128631|ref|XP_002008765.1| GI13674 [Drosophila mojavensis]
gi|193920374|gb|EDW19241.1| GI13674 [Drosophila mojavensis]
Length = 1081
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 54/90 (60%), Positives = 69/90 (76%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ LN FV S G+FVYF RE+A E ++CGK +YSR+ARVCK D GG
Sbjct: 214 LRTKQYNTNWLNGAQFVGSFEAGNFVYFLLRESASEHMSCGKVIYSRIARVCKNDAGGDQ 273
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
R+ WTSFLK+RLNCS+PGD+P+YFDEIQ
Sbjct: 274 VLRDNWTSFLKARLNCSLPGDYPYYFDEIQ 303
>gi|194757335|ref|XP_001960920.1| GF13604 [Drosophila ananassae]
gi|190622218|gb|EDV37742.1| GF13604 [Drosophila ananassae]
Length = 721
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 238 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNL 297
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 298 LAHNWATYLKARLNCSISGEFPFYFNEIQ 326
>gi|345497365|ref|XP_001599891.2| PREDICTED: semaphorin-2A-like [Nasonia vitripennis]
Length = 724
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+ V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 233 RTLKYDSKWLDKPNFVGSFDIGEHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 292
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 293 LAQNWATYLKARLNCSIPGEFPFYFNEIQ 321
>gi|195429944|ref|XP_002063017.1| GK21697 [Drosophila willistoni]
gi|194159102|gb|EDW74003.1| GK21697 [Drosophila willistoni]
Length = 731
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S GD+VYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 241 RTVKYDSKLLDKPNFVGSFDIGDYVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 300
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 301 ISQNWATYLKARMNCSISSEFPFYFNEIQ 329
>gi|345493255|ref|XP_001603820.2| PREDICTED: semaphorin-5A-like [Nasonia vitripennis]
Length = 1036
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 3 PIIYREP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
P IYR P L+T QYDS L+ P FV S D+VYF FRE+AVE+INCGK +YSR+AR+C
Sbjct: 131 PAIYRSPNLRTRQYDSKWLDNPQFVGSFDTDDYVYFLFRESAVEYINCGKRIYSRIARIC 190
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
KYD G ++ WT+F K+RLNCS+PG+FPFY+DEIQ
Sbjct: 191 KYDPGS-TIIKDVWTTFNKARLNCSLPGEFPFYYDEIQ 227
>gi|443705241|gb|ELU01896.1| hypothetical protein CAPTEDRAFT_100167, partial [Capitella teleta]
Length = 453
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 76/103 (73%), Gaps = 5/103 (4%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP I R P L+T QY+S LN PNFVS+ + VYFFFRETAVE+INCGK+VYSR
Sbjct: 142 DPAILRMMGPSPYLRTVQYNSRWLNEPNFVSTYEINESVYFFFRETAVEYINCGKSVYSR 201
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG + WTSF K+RLNCS+PG +PFYF+E+Q
Sbjct: 202 VARLCKSDTGGKFVLEDNWTSFSKARLNCSLPGTYPFYFNELQ 244
>gi|195488190|ref|XP_002092209.1| GE11790 [Drosophila yakuba]
gi|194178310|gb|EDW91921.1| GE11790 [Drosophila yakuba]
Length = 783
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 294 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 353
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 354 ISQNWATYLKARMNCSISSEFPFYFNEIQ 382
>gi|442623921|ref|NP_001261024.1| Semaphorin-2b, isoform D [Drosophila melanogaster]
gi|440214449|gb|AGB93556.1| Semaphorin-2b, isoform D [Drosophila melanogaster]
Length = 824
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 296 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 355
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 356 ISQNWATYLKARMNCSISSEFPFYFNEIQ 384
>gi|195334927|ref|XP_002034128.1| GM21695 [Drosophila sechellia]
gi|194126098|gb|EDW48141.1| GM21695 [Drosophila sechellia]
Length = 784
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 295 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 354
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 355 MSQNWATYLKARMNCSISSEFPFYFNEIQ 383
>gi|157111917|ref|XP_001657355.1| semaphorin [Aedes aegypti]
gi|108878254|gb|EAT42479.1| AAEL005993-PA [Aedes aegypti]
Length = 709
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRETAVE+INCGKAVYSR+ARVCK D GG +
Sbjct: 239 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDTGGKNI 298
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ G+FPFYF+EIQ
Sbjct: 299 LNQNWATYLKARINCSISGEFPFYFNEIQ 327
>gi|60677933|gb|AAX33473.1| RE07394p [Drosophila melanogaster]
Length = 798
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 295 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 354
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 355 ISQNWATYLKARMNCSISSEFPFYFNEIQ 383
>gi|195583934|ref|XP_002081771.1| GD11191 [Drosophila simulans]
gi|194193780|gb|EDX07356.1| GD11191 [Drosophila simulans]
Length = 784
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 295 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 354
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 355 ISQNWATYLKARMNCSISSEFPFYFNEIQ 383
>gi|194882513|ref|XP_001975355.1| GG20603 [Drosophila erecta]
gi|190658542|gb|EDV55755.1| GG20603 [Drosophila erecta]
Length = 783
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 294 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKSDRGGKYL 353
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 354 INQNWATYLKARMNCSISSEFPFYFNEIQ 382
>gi|85725032|ref|NP_001033952.1| Semaphorin-2b, isoform A [Drosophila melanogaster]
gi|442623923|ref|NP_001261025.1| Semaphorin-2b, isoform C [Drosophila melanogaster]
gi|84795748|gb|AAM68522.2| Semaphorin-2b, isoform A [Drosophila melanogaster]
gi|378548252|gb|AFC17500.1| FI18622p1 [Drosophila melanogaster]
gi|440214450|gb|AGB93557.1| Semaphorin-2b, isoform C [Drosophila melanogaster]
Length = 784
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 295 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 354
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 355 ISQNWATYLKARMNCSISSEFPFYFNEIQ 383
>gi|194757311|ref|XP_001960908.1| GF13596 [Drosophila ananassae]
gi|190622206|gb|EDV37730.1| GF13596 [Drosophila ananassae]
Length = 742
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 253 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 312
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 313 ISQNWATYLKARMNCSISSEFPFYFNEIQ 341
>gi|221330323|ref|NP_001137680.1| Semaphorin-2b, isoform B [Drosophila melanogaster]
gi|85857624|gb|ABC86347.1| IP13724p [Drosophila melanogaster]
gi|220902247|gb|ACL83134.1| Semaphorin-2b, isoform B [Drosophila melanogaster]
Length = 785
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 296 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 355
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 356 ISQNWATYLKARMNCSISSEFPFYFNEIQ 384
>gi|324096496|gb|ADY17777.1| RT10064p [Drosophila melanogaster]
Length = 712
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGKAVYSRVARVCK DRGG +
Sbjct: 223 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYM 282
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 283 ISQNWATYLKARMNCSISSEFPFYFNEIQ 311
>gi|195020364|ref|XP_001985180.1| GH16920 [Drosophila grimshawi]
gi|193898662|gb|EDV97528.1| GH16920 [Drosophila grimshawi]
Length = 1061
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 70/90 (77%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ LN FV S G+FVYF RE+A E ++CGKA+YSR+ARVCK D GG
Sbjct: 191 LRTKQYNNNWLNGAQFVGSFEAGNFVYFLLRESAAEHMSCGKAIYSRIARVCKNDAGGDQ 250
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
R+ WTSFLK+RLNCS+PGD+P+YFDEIQ
Sbjct: 251 VLRDNWTSFLKARLNCSLPGDYPYYFDEIQ 280
>gi|328704964|ref|XP_001945557.2| PREDICTED: semaphorin-5B-like [Acyrthosiphon pisum]
Length = 1039
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 70/90 (77%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+ YD+ LN P FV S +VYF FRE+AVE+INCGK VYSR+AR+CK D GG
Sbjct: 189 LRTKNYDAKWLNEPQFVGSFETDAYVYFLFRESAVEYINCGKRVYSRIARMCKNDVGGQT 248
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
R+ WT+F+K+RLNCS+PGD+PFYFDEIQ
Sbjct: 249 MLRDNWTTFIKARLNCSLPGDYPFYFDEIQ 278
>gi|242013140|ref|XP_002427273.1| Semaphorin-2A precursor, putative [Pediculus humanus corporis]
gi|212511606|gb|EEB14535.1| Semaphorin-2A precursor, putative [Pediculus humanus corporis]
Length = 693
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++V FFFRETAVE+INCGK++YSRVARVCK D GG +
Sbjct: 205 RTLKYDSKWLDKPNFVGSYDVGEYVLFFFRETAVEYINCGKSIYSRVARVCKRDTGGKNI 264
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 265 LSQNWATYLKARLNCSIPGEFPFYFNEIQ 293
>gi|158296201|ref|XP_316666.4| AGAP006634-PA [Anopheles gambiae str. PEST]
gi|157016398|gb|EAA11400.4| AGAP006634-PA [Anopheles gambiae str. PEST]
Length = 718
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+ VYFFFRETAVE+INCGKAVYSRVARVCK D GG +
Sbjct: 236 RTLKYDSKWLDKPNFVGSFDIGEHVYFFFRETAVEYINCGKAVYSRVARVCKKDTGGKNI 295
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ G+FPFYF+EIQ
Sbjct: 296 LNQNWATYLKARINCSISGEFPFYFNEIQ 324
>gi|332023628|gb|EGI63859.1| Semaphorin-2A [Acromyrmex echinatior]
Length = 555
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 64 RTLKYDSKWLDKPNFVGSFDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 123
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 124 LSQNWATYLKARLNCSIPGEFPFYFNEIQ 152
>gi|350414359|ref|XP_003490291.1| PREDICTED: semaphorin-2A-like isoform 2 [Bombus impatiens]
gi|350414361|ref|XP_003490292.1| PREDICTED: semaphorin-2A-like isoform 3 [Bombus impatiens]
Length = 711
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 220 RTLKYDSKWLDKPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 279
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W+++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 280 LSQNWSTYLKARLNCSIPGEFPFYFNEIQ 308
>gi|328782173|ref|XP_392426.3| PREDICTED: semaphorin-2A [Apis mellifera]
gi|380020174|ref|XP_003693969.1| PREDICTED: semaphorin-2A-like [Apis florea]
Length = 734
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 243 RTLKYDSKWLDKPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 302
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W+++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 303 LSQNWSTYLKARLNCSIPGEFPFYFNEIQ 331
>gi|340715165|ref|XP_003396089.1| PREDICTED: semaphorin-2A-like isoform 1 [Bombus terrestris]
gi|340715167|ref|XP_003396090.1| PREDICTED: semaphorin-2A-like isoform 2 [Bombus terrestris]
Length = 711
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 220 RTLKYDSKWLDKPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 279
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W+++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 280 LSQNWSTYLKARLNCSIPGEFPFYFNEIQ 308
>gi|158296205|ref|XP_316667.4| AGAP006636-PA [Anopheles gambiae str. PEST]
gi|157016400|gb|EAA11003.5| AGAP006636-PA [Anopheles gambiae str. PEST]
Length = 679
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G++VYFFFRE AVE+INCGKAVYSRVARVCK D GG +
Sbjct: 207 RTLKYDSKWLDKPNFVGSFDIGEYVYFFFREIAVEYINCGKAVYSRVARVCKKDTGGKNI 266
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+ G+FPFYF+EIQ
Sbjct: 267 LNQNWATYLKARLNCSISGEFPFYFNEIQ 295
>gi|405975987|gb|EKC40512.1| Semaphorin-5A [Crassostrea gigas]
Length = 1044
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 79/103 (76%), Gaps = 6/103 (5%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+I+R L+T Q +S LN P+FVS+ +F+YFFFRE A E+INCGK +Y+R
Sbjct: 156 DPVIFRILPSDSRLRTRQ-NSKWLNEPDFVSAYEVDNFIYFFFREVATEYINCGKRIYAR 214
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D+GG F++ WT++LK+RLNCS+PG++PFYFDE+Q
Sbjct: 215 VARVCKSDKGGDMHFKDNWTTYLKARLNCSIPGEYPFYFDELQ 257
>gi|350414357|ref|XP_003490290.1| PREDICTED: semaphorin-2A-like isoform 1 [Bombus impatiens]
Length = 734
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 243 RTLKYDSKWLDKPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 302
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W+++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 303 LSQNWSTYLKARLNCSIPGEFPFYFNEIQ 331
>gi|308222732|gb|ABK35089.2| semaphorin 2a [Gryllus bimaculatus]
Length = 435
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G +V FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 184 RTLKYDSKWLDKPNFVGSYDIGQYVLFFFRETAVEYINCGKSVYSRVARVCKKDTGGKNI 243
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 244 LSQNWATYLKARLNCSIPGEFPFYFNEIQ 272
>gi|212283364|gb|ACJ23177.1| semaphorin 2a [Polyrhachis vicina]
Length = 716
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 225 RTLKYDSKWLDKPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 284
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 285 LAQNWATYLKARLNCSIPGEFPFYFNEIQ 313
>gi|260825397|ref|XP_002607653.1| hypothetical protein BRAFLDRAFT_84658 [Branchiostoma floridae]
gi|229293001|gb|EEN63663.1| hypothetical protein BRAFLDRAFT_84658 [Branchiostoma floridae]
Length = 1096
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 73/104 (70%), Gaps = 5/104 (4%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR L+T QY+S LN PNFVSS GDF+YFFFRETA E NCGK V+SR
Sbjct: 239 DPAIYRMMGQHPTLRTVQYNSKWLNEPNFVSSYEIGDFIYFFFRETAAENENCGKTVFSR 298
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
VAR+CK D GG WT+F+K+RLNCS PG FPFY++E+Q
Sbjct: 299 VARICKNDIGGHFLLEENWTTFMKARLNCSRPGQFPFYYNELQA 342
>gi|270015605|gb|EFA12053.1| semaphorin-5c [Tribolium castaneum]
Length = 884
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 71/90 (78%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
++T+QY+S LN P FV + +FVYF FRETAVE++NCGK +YSR+ARVCK D GG
Sbjct: 195 IRTKQYNSFLLNDPQFVGTFETENFVYFLFRETAVEYMNCGKTIYSRIARVCKNDPGGHT 254
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++ WT+FLK+RLNCSV G++PFYFDEIQ
Sbjct: 255 MLKDNWTTFLKARLNCSVSGEYPFYFDEIQ 284
>gi|91093541|ref|XP_966934.1| PREDICTED: similar to AGAP002424-PA [Tribolium castaneum]
Length = 873
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 71/90 (78%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
++T+QY+S LN P FV + +FVYF FRETAVE++NCGK +YSR+ARVCK D GG
Sbjct: 184 IRTKQYNSFLLNDPQFVGTFETENFVYFLFRETAVEYMNCGKTIYSRIARVCKNDPGGHT 243
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++ WT+FLK+RLNCSV G++PFYFDEIQ
Sbjct: 244 MLKDNWTTFLKARLNCSVSGEYPFYFDEIQ 273
>gi|307184882|gb|EFN71160.1| Semaphorin-2A [Camponotus floridanus]
Length = 690
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 70/89 (78%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV + G V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 199 RTLKYDSKWLDKPNFVGAYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 258
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 259 LAQNWATYLKARLNCSIPGEFPFYFNEIQ 287
>gi|383860772|ref|XP_003705863.1| PREDICTED: semaphorin-2A-like [Megachile rotundata]
Length = 733
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 243 RTLKYDSKWLDKPNFVGSYDIGIHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 302
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W+++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 303 LSQNWSTYLKARLNCSIPGEFPFYFNEIQ 331
>gi|198465403|ref|XP_002134967.1| GA23503 [Drosophila pseudoobscura pseudoobscura]
gi|198150144|gb|EDY73594.1| GA23503 [Drosophila pseudoobscura pseudoobscura]
Length = 1094
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 69/90 (76%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ LN FV S G+FVYF RE+A E + CGKA+YSR+ARVCK D GG
Sbjct: 219 LRTKQYNNNWLNGAQFVGSFEAGNFVYFLLRESAAEHMTCGKAIYSRIARVCKNDAGGGQ 278
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
R+ WTSFLK+RLNCS+PG++P+YFDE+Q
Sbjct: 279 LLRDNWTSFLKARLNCSLPGEYPYYFDEVQ 308
>gi|390179713|ref|XP_001360453.3| GA30014 [Drosophila pseudoobscura pseudoobscura]
gi|388859941|gb|EAL25028.3| GA30014 [Drosophila pseudoobscura pseudoobscura]
Length = 766
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGK VYSRVARVCK DRGG +
Sbjct: 265 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKEVYSRVARVCKNDRGGKYM 324
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 325 ISQNWATYLKARMNCSISSEFPFYFNEIQ 353
>gi|321466135|gb|EFX77132.1| hypothetical protein DAPPUDRAFT_54505 [Daphnia pulex]
Length = 945
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 5 IYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYD 64
I + L+T QY++M LN P+FV S+ +FVYFFFRE AVEF NCGKAVYSRVARVCK D
Sbjct: 178 IIKGRLRTMQYNAMWLNVPDFVGSVEADNFVYFFFREAAVEFSNCGKAVYSRVARVCKND 237
Query: 65 RGGPH-RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
GG ++ WT+FLK+RLNCS+P ++PFY+D IQ
Sbjct: 238 LGGGQLMLKDTWTTFLKARLNCSLPAEYPFYYDHIQ 273
>gi|195150059|ref|XP_002015972.1| GL10736 [Drosophila persimilis]
gi|194109819|gb|EDW31862.1| GL10736 [Drosophila persimilis]
Length = 465
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S G+FVYFFFRE AVE+INCGK VYSRVARVCK DRGG +
Sbjct: 269 RTVKYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKEVYSRVARVCKNDRGGKYM 328
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W ++LK+R+NCS+ +FPFYF+EIQ
Sbjct: 329 ISQNWATYLKARMNCSISSEFPFYFNEIQ 357
>gi|307192922|gb|EFN75947.1| Semaphorin-2A [Harpegnathos saltator]
Length = 594
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ PNFV S + V+FFFRETAVE+INCGK+VYSRVARVCK D GG +
Sbjct: 103 RTLKYDSKWLDKPNFVGSYDIDNHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNI 162
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
W+++LK+RLNCS+PG+FPFYF+EIQ
Sbjct: 163 LAQNWSTYLKARLNCSIPGEFPFYFNEIQ 191
>gi|327270602|ref|XP_003220078.1| PREDICTED: semaphorin-5A-like [Anolis carolinensis]
Length = 1077
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+FVYFFFRE AVE +CGK V+SR
Sbjct: 194 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFVYFFFRENAVEH-DCGKIVFSR 252
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS+PG+ PFY++E+Q
Sbjct: 253 AARVCKNDIGGRFLLEDTWTTFMKARLNCSLPGEIPFYYNELQ 295
>gi|328703580|ref|XP_001948405.2| PREDICTED: semaphorin-2A-like [Acyrthosiphon pisum]
Length = 704
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 71/89 (79%)
Query: 11 QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR 70
+T +YDS L+ P+FV S G +V+FFFRETAVE+INCGK+++SRVARVCK D GG
Sbjct: 213 RTLKYDSNWLDKPDFVGSYDIGQYVFFFFRETAVEYINCGKSIFSRVARVCKKDTGGKSI 272
Query: 71 FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W ++LK+RLNCS+PG++PFYF+EIQ
Sbjct: 273 LSHNWATYLKARLNCSIPGEYPFYFNEIQ 301
>gi|390358028|ref|XP_785925.3| PREDICTED: semaphorin-5B-like, partial [Strongylocentrotus
purpuratus]
Length = 1053
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 5/103 (4%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL+T Q +S LN PNFV+S G +VYFFFRETAVEF NCG+ +YSR
Sbjct: 216 DAVVYRTLGPSAPLRTAQLNSKWLNNPNFVASYEIGPYVYFFFRETAVEFSNCGQIIYSR 275
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG WT+F K+RLNCS+PG PF F+EI+
Sbjct: 276 VARVCKSDNGGNFLLEENWTTFRKARLNCSIPGKIPFSFNEIE 318
>gi|312371479|gb|EFR19657.1| hypothetical protein AND_22051 [Anopheles darlingi]
Length = 362
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T QY+S+ LN P FV S G F+YF RE AVE++NCGK VYSR+ARVCK D GG +
Sbjct: 253 LRTVQYNSLLLNDPQFVGSFEHGGFIYFVLREAAVEYMNCGKIVYSRIARVCKNDPGGTY 312
Query: 70 R-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
R+ WTSF+K+RLNCS+PG++PFY++E+Q
Sbjct: 313 GILRDNWTSFVKARLNCSLPGNYPFYYNEVQ 343
>gi|350594507|ref|XP_003483911.1| PREDICTED: semaphorin-5A-like [Sus scrofa]
Length = 959
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 AARVCKNDLGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|359323724|ref|XP_003640174.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Canis lupus
familiaris]
Length = 1459
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 583 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 641
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 642 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 684
>gi|3080661|gb|AAC14668.1| semaphorin F [Homo sapiens]
Length = 494
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|363730594|ref|XP_419016.3| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5A [Gallus gallus]
Length = 1076
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 193 DPAIYRSLGALPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 251
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 252 AARVCKNDIGGKFVLEDTWTTFMKARLNCSRPGEIPFYYNELQ 294
>gi|395510825|ref|XP_003759669.1| PREDICTED: semaphorin-5A-like, partial [Sarcophilus harrisii]
Length = 596
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 194 DPAIYRSLGVLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 252
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 253 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 295
>gi|40674845|gb|AAH65137.1| Sema5a protein [Mus musculus]
Length = 562
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|431903064|gb|ELK09242.1| Semaphorin-5A [Pteropus alecto]
Length = 448
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGVLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|449493798|ref|XP_002189755.2| PREDICTED: semaphorin-5A [Taeniopygia guttata]
Length = 1076
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 193 DPAIYRSLGALPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 251
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 252 AARVCKNDIGGKFVLADTWTTFMKARLNCSRPGEIPFYYNELQ 294
>gi|432094214|gb|ELK25889.1| Semaphorin-5A [Myotis davidii]
Length = 1073
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGLLPPLRTAQYNSKWLNEPNFVSSYAIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 AARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|149508054|ref|XP_001519121.1| PREDICTED: semaphorin-5A [Ornithorhynchus anatinus]
Length = 1095
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 211 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 269
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 270 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEIPFYYNELQ 312
>gi|195427577|ref|XP_002061853.1| GK17220 [Drosophila willistoni]
gi|194157938|gb|EDW72839.1| GK17220 [Drosophila willistoni]
Length = 1098
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ LN FV S G+FVYF RE+A E + CGK +YSR+ARVCK D GG
Sbjct: 208 LRTKQYNNNWLNGAQFVGSFEAGNFVYFLLRESAAEHMTCGKVIYSRIARVCKNDVGGGG 267
Query: 70 R-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ R+ WTSFLK+RLNCS+PGD+P+YFDEIQ
Sbjct: 268 QLLRDNWTSFLKARLNCSLPGDYPYYFDEIQ 298
>gi|344272240|ref|XP_003407943.1| PREDICTED: semaphorin-5A [Loxodonta africana]
Length = 1073
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGVLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 AARVCKNDLGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|390460139|ref|XP_003732426.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5A [Callithrix jacchus]
Length = 1094
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|114598960|ref|XP_517627.2| PREDICTED: semaphorin-5A isoform 2 [Pan troglodytes]
gi|397475714|ref|XP_003809271.1| PREDICTED: semaphorin-5A [Pan paniscus]
gi|410208204|gb|JAA01321.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A [Pan troglodytes]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|147904700|ref|NP_003957.2| semaphorin-5A precursor [Homo sapiens]
gi|109939725|sp|Q13591.3|SEM5A_HUMAN RecName: Full=Semaphorin-5A; AltName: Full=Semaphorin-F; Short=Sema
F; Flags: Precursor
gi|92110209|gb|AAI15697.1| Sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A [Homo sapiens]
gi|119628483|gb|EAX08078.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_a [Homo sapiens]
gi|119628484|gb|EAX08079.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_a [Homo sapiens]
gi|168275656|dbj|BAG10548.1| semaphorin-5A precursor [synthetic construct]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|157817839|ref|NP_001101129.1| semaphorin-5A precursor [Rattus norvegicus]
gi|426020751|sp|D3ZTD8.1|SEM5A_RAT RecName: Full=Semaphorin-5A; AltName: Full=Semaphorin-F; Short=Sema
F; Flags: Precursor
gi|149026507|gb|EDL82657.1| rCG53309 [Rattus norvegicus]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|380785729|gb|AFE64740.1| semaphorin-5A precursor [Macaca mulatta]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|355749813|gb|EHH54151.1| Semaphorin-F [Macaca fascicularis]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|148676921|gb|EDL08868.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_b [Mus musculus]
Length = 661
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 210 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 268
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 269 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 311
>gi|332228051|ref|XP_003263204.1| PREDICTED: semaphorin-5A [Nomascus leucogenys]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|388452518|ref|NP_001253423.1| semaphorin-5A precursor [Macaca mulatta]
gi|387273365|gb|AFJ70177.1| semaphorin-5A precursor [Macaca mulatta]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|2772584|gb|AAC09473.1| semaphorin F homolog [Homo sapiens]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|410949833|ref|XP_003981621.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5A [Felis catus]
Length = 1060
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|119226253|ref|NP_033180.2| semaphorin-5A precursor [Mus musculus]
gi|74200772|dbj|BAE24765.1| unnamed protein product [Mus musculus]
gi|74224531|dbj|BAE25254.1| unnamed protein product [Mus musculus]
gi|148676920|gb|EDL08867.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_a [Mus musculus]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|74180414|dbj|BAE34160.1| unnamed protein product [Mus musculus]
Length = 710
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|359323752|ref|XP_848441.3| PREDICTED: semaphorin-5A isoform 2 [Canis lupus familiaris]
Length = 1073
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|402871141|ref|XP_003899540.1| PREDICTED: semaphorin-5A [Papio anubis]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|403282211|ref|XP_003932550.1| PREDICTED: semaphorin-5A [Saimiri boliviensis boliviensis]
Length = 1074
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|395833178|ref|XP_003789619.1| PREDICTED: semaphorin-5A [Otolemur garnettii]
Length = 1038
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|301766498|ref|XP_002918670.1| PREDICTED: semaphorin-5A-like [Ailuropoda melanoleuca]
gi|281339465|gb|EFB15049.1| hypothetical protein PANDA_007165 [Ailuropoda melanoleuca]
Length = 1073
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|194224024|ref|XP_001917420.1| PREDICTED: semaphorin-5A [Equus caballus]
Length = 1073
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGVLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|148229411|ref|NP_001079991.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B precursor [Xenopus laevis]
gi|37590696|gb|AAH59288.1| MGC68835 protein [Xenopus laevis]
Length = 1088
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 74/103 (71%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+IYR PL+T QY+S LN PNF+++ G F YFFFRE AVE +CGK VYSR
Sbjct: 199 DPVIYRSLGSVPPLRTAQYNSKWLNEPNFMAAYDIGIFTYFFFRENAVEH-DCGKTVYSR 257
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 258 VARVCKNDYGGRFLLEDTWTTFMKARLNCSRPGEIPFYYNELQ 300
>gi|444729753|gb|ELW70159.1| Semaphorin-5A [Tupaia chinensis]
Length = 1350
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 172 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 230
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY+ E+Q
Sbjct: 231 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYHELQ 273
>gi|148676922|gb|EDL08869.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_c [Mus musculus]
Length = 863
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 210 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 268
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 269 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 311
>gi|26335661|dbj|BAC31531.1| unnamed protein product [Mus musculus]
Length = 844
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|348561904|ref|XP_003466751.1| PREDICTED: semaphorin-5A-like [Cavia porcellus]
Length = 1073
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGLLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY+ E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYHELQ 291
>gi|194676657|ref|XP_583112.4| PREDICTED: semaphorin-5A [Bos taurus]
Length = 1051
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY+ E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYHELQ 291
>gi|126320975|ref|XP_001371845.1| PREDICTED: semaphorin-5A [Monodelphis domestica]
Length = 1074
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV+S G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVASYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|297487819|ref|XP_002696487.1| PREDICTED: semaphorin-5A [Bos taurus]
gi|296475692|tpg|DAA17807.1| TPA: sema domain, seven thrombospondin repeats (type 1 and type
1-like), transmembrane domain (TM) and short cytoplasmic
domain, (semaphorin) 5A [Bos taurus]
Length = 1073
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY+ E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYHELQ 291
>gi|426246722|ref|XP_004017140.1| PREDICTED: semaphorin-5A [Ovis aries]
Length = 1073
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY+ E+Q
Sbjct: 249 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYHELQ 291
>gi|440897171|gb|ELR48926.1| Semaphorin-5A, partial [Bos grunniens mutus]
Length = 607
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 103 DPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 161
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY+ E+Q
Sbjct: 162 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYHELQ 204
>gi|8134718|sp|Q62217.1|SEM5A_MOUSE RecName: Full=Semaphorin-5A; AltName: Full=Semaphorin-F; Short=Sema
F; Flags: Precursor
gi|1419019|emb|CAA66397.1| smaphorin F [Mus musculus]
Length = 1077
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 PARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|312371351|gb|EFR19565.1| hypothetical protein AND_22221 [Anopheles darlingi]
Length = 513
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 62/77 (80%)
Query: 23 PNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSR 82
PNFV S G+ VYFFFRETAVE+INCGKAVYSRVARVCK D GG + W ++LK+R
Sbjct: 319 PNFVGSFDIGEHVYFFFRETAVEYINCGKAVYSRVARVCKKDTGGKNILNQNWATYLKAR 378
Query: 83 LNCSVPGDFPFYFDEIQ 99
+NCS+ G+FPFYF+EIQ
Sbjct: 379 INCSISGEFPFYFNEIQ 395
>gi|194869616|ref|XP_001972486.1| GG13858 [Drosophila erecta]
gi|190654269|gb|EDV51512.1| GG13858 [Drosophila erecta]
Length = 1097
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/91 (57%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ L+ FV S G FVYF RE+A E ++CGK +YSR+ARVCK D GG
Sbjct: 220 LRTKQYNNNWLSGAQFVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRIARVCKNDVGGGG 279
Query: 70 R-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ R+ WTSFLK+RLNCS+PG++P+YFDEIQ
Sbjct: 280 QLLRDNWTSFLKARLNCSLPGEYPYYFDEIQ 310
>gi|351700257|gb|EHB03176.1| Semaphorin-5A [Heterocephalus glaber]
Length = 1073
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 190 DPAIYRSLGLLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 248
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+RVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 249 ASRVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 291
>gi|284005174|ref|NP_001164716.1| semaphorin 5A-like protein [Saccoglossus kowalevskii]
gi|283464109|gb|ADB22638.1| semaphorin 5A-like protein [Saccoglossus kowalevskii]
Length = 935
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 63/77 (81%)
Query: 23 PNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSR 82
PNFVSS G ++YF+FRETAVE++NCGK +YSRVARVCK D GG + WT+F K+R
Sbjct: 91 PNFVSSYEIGSYIYFYFRETAVEYMNCGKTIYSRVARVCKNDSGGHFLLEDNWTTFTKAR 150
Query: 83 LNCSVPGDFPFYFDEIQ 99
LNCS+PG+FPFYFDE+Q
Sbjct: 151 LNCSLPGEFPFYFDELQ 167
>gi|324504321|gb|ADY41866.1| Semaphorin-2A [Ascaris suum]
Length = 725
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 70/107 (65%), Gaps = 11/107 (10%)
Query: 4 IIYREPL-----------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL +T DS LN P FVSSL+ G +VYFF RE AVE NCG+
Sbjct: 224 LIYRPPLVLNNKEVHSSMRTVYTDSKWLNEPQFVSSLSIGSYVYFFLREVAVEHENCGRV 283
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VYSRVAR+CK D GG + R WTSF+K+RLNCS+ FP YFD+IQ
Sbjct: 284 VYSRVARLCKKDVGGKNVLRQVWTSFVKARLNCSISSQFPLYFDQIQ 330
>gi|324505574|gb|ADY42394.1| Semaphorin-2A [Ascaris suum]
Length = 661
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 70/107 (65%), Gaps = 11/107 (10%)
Query: 4 IIYREPL-----------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL +T DS LN P FVSSL+ G +VYFF RE AVE NCG+
Sbjct: 179 LIYRPPLVLNNKEVHSSMRTVYTDSKWLNEPQFVSSLSIGSYVYFFLREVAVEHENCGRV 238
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VYSRVAR+CK D GG + R WTSF+K+RLNCS+ FP YFD+IQ
Sbjct: 239 VYSRVARLCKKDVGGKNVLRQVWTSFVKARLNCSISSQFPLYFDQIQ 285
>gi|344249118|gb|EGW05222.1| Semaphorin-5A [Cricetulus griseus]
Length = 1046
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS +F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIANFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|354466052|ref|XP_003495490.1| PREDICTED: semaphorin-5B-like [Cricetulus griseus]
Length = 1046
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV+S G F YFF RE AVE +CG+ VYSR
Sbjct: 231 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVASFDIGLFAYFFLRENAVEH-DCGRTVYSR 289
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 290 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 332
>gi|354475930|ref|XP_003500179.1| PREDICTED: semaphorin-5A [Cricetulus griseus]
Length = 1074
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS +F YFFFRE AVE +CGK V+SR
Sbjct: 191 DPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIANFTYFFFRENAVEH-DCGKTVFSR 249
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 250 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 292
>gi|322787454|gb|EFZ13542.1| hypothetical protein SINV_06809 [Solenopsis invicta]
Length = 479
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 62/77 (80%)
Query: 23 PNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSR 82
PNFV S G V+FFFRETAVE+INCGK+VYSRVARVCK D GG + W ++LK+R
Sbjct: 7 PNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILAQNWATYLKAR 66
Query: 83 LNCSVPGDFPFYFDEIQ 99
LNCS+PG+FPFYF+EIQ
Sbjct: 67 LNCSIPGEFPFYFNEIQ 83
>gi|344240313|gb|EGV96416.1| Semaphorin-5B [Cricetulus griseus]
Length = 979
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV+S G F YFF RE AVE +CG+ VYSR
Sbjct: 108 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVASFDIGLFAYFFLRENAVEH-DCGRTVYSR 166
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 167 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 209
>gi|312381645|gb|EFR27350.1| hypothetical protein AND_06001 [Anopheles darlingi]
Length = 633
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 62/80 (77%)
Query: 20 LNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFL 79
L PNFV S G+ VYFFFRE AVE+INCGKAVYSRVARVCK D GG + W ++L
Sbjct: 169 LRQPNFVGSFDIGEHVYFFFREIAVEYINCGKAVYSRVARVCKKDTGGKNILNQNWATYL 228
Query: 80 KSRLNCSVPGDFPFYFDEIQ 99
K+RLNCS+ G+FPFYF+EIQ
Sbjct: 229 KARLNCSIAGEFPFYFNEIQ 248
>gi|194749961|ref|XP_001957400.1| GF10396 [Drosophila ananassae]
gi|190624682|gb|EDV40206.1| GF10396 [Drosophila ananassae]
Length = 1088
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ LN FV S G+FVYF RE+AVE ++CGK +YSR+ARVCK D GG
Sbjct: 214 LRTKQYNNNWLNGAQFVGSFEAGNFVYFLLRESAVEHLSCGKVIYSRIARVCKNDAGGGR 273
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ W SFLK+RL+CS+PG++P+YFDE+Q
Sbjct: 274 WAKENWMSFLKARLHCSLPGEYPYYFDEVQ 303
>gi|195493718|ref|XP_002094536.1| GE20151 [Drosophila yakuba]
gi|194180637|gb|EDW94248.1| GE20151 [Drosophila yakuba]
Length = 1088
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ L+ FV S G+FVYF RE+A E ++CGK +YSR+ARVCK D GG
Sbjct: 211 LRTKQYNNNWLSGAQFVGSFEAGNFVYFLLRESAAEHMSCGKVIYSRIARVCKNDVGGGG 270
Query: 70 R-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ R+ WTSFLK+RLNCS+PG++P+YFDEIQ
Sbjct: 271 QLLRDNWTSFLKARLNCSLPGEYPYYFDEIQ 301
>gi|157820763|ref|NP_001100561.1| semaphorin-5B precursor [Rattus norvegicus]
gi|149060595|gb|EDM11309.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1041
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|195589712|ref|XP_002084593.1| GD12751 [Drosophila simulans]
gi|194196602|gb|EDX10178.1| GD12751 [Drosophila simulans]
Length = 1097
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ L+ FV S G+FVYF RE+A E ++CGK +YSR+ARVCK D GG
Sbjct: 220 LRTKQYNNNWLSGAQFVGSFEAGNFVYFLLRESAAEHMSCGKVIYSRIARVCKNDVGGGG 279
Query: 70 R-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ R+ WTSFLK+RLNCS+PG++P+YFDEIQ
Sbjct: 280 QLLRDNWTSFLKARLNCSLPGEYPYYFDEIQ 310
>gi|148665469|gb|EDK97885.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_a [Mus musculus]
Length = 1072
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|149060596|gb|EDM11310.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 1066
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|149060598|gb|EDM11312.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 1087
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|195327031|ref|XP_002030225.1| GM24682 [Drosophila sechellia]
gi|194119168|gb|EDW41211.1| GM24682 [Drosophila sechellia]
Length = 1378
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ L+ FV S G+FVYF RE+A E ++CGK +YSR+ARVCK D GG
Sbjct: 501 LRTKQYNNNWLSGAQFVGSFEAGNFVYFLLRESAAEHMSCGKVIYSRIARVCKNDVGGGG 560
Query: 70 R-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ R+ WTSFLK+RLNCS+PG++P+YFDEIQ
Sbjct: 561 QLLRDNWTSFLKARLNCSLPGEYPYYFDEIQ 591
>gi|395519105|ref|XP_003763692.1| PREDICTED: semaphorin-5B isoform 3 [Sarcophilus harrisii]
Length = 1059
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEIPFYYNELQ 302
>gi|30851457|gb|AAH52397.1| Sema5b protein [Mus musculus]
Length = 1122
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|395519103|ref|XP_003763691.1| PREDICTED: semaphorin-5B isoform 2 [Sarcophilus harrisii]
Length = 1128
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEIPFYYNELQ 302
>gi|12081909|dbj|BAB20670.1| semaphorin Y [Homo sapiens]
Length = 930
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 59/104 (56%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE GK +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGKVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|334329781|ref|XP_003341264.1| PREDICTED: semaphorin-5B [Monodelphis domestica]
Length = 1082
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEIPFYYNELQ 302
>gi|324505777|gb|ADY42477.1| Semaphorin-1A [Ascaris suum]
Length = 754
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 8/107 (7%)
Query: 2 DPIIYRE--------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAV 53
DP+I+R ++TE+ D LN P F S +VY +FRE A E +C +A+
Sbjct: 192 DPLIHRRNVSKLLELGIRTERNDVKFLNEPQFAGSFKDEKYVYLWFREQAAELESCSRAI 251
Query: 54 YSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
YSRVAR+C+ D GGP + N WTSF+K+RLNCSVPGD+PFYFD+I+
Sbjct: 252 YSRVARLCRSDMGGPRPYSNEWTSFVKARLNCSVPGDYPFYFDQIEA 298
>gi|164698462|ref|NP_038689.2| semaphorin-5B precursor [Mus musculus]
gi|341942022|sp|Q60519.2|SEM5B_MOUSE RecName: Full=Semaphorin-5B; AltName: Full=Semaphorin-G; Short=Sema
G; Flags: Precursor
gi|148665473|gb|EDK97889.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_e [Mus musculus]
Length = 1093
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|281366124|ref|NP_001163430.1| Semaphorin-5c, isoform B [Drosophila melanogaster]
gi|33589336|gb|AAQ22435.1| RE68041p [Drosophila melanogaster]
gi|272455171|gb|ACZ94701.1| Semaphorin-5c, isoform B [Drosophila melanogaster]
Length = 1091
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ L+ FV S G FVYF RE+A E ++CGK +YSRVARVCK D GG
Sbjct: 218 LRTKQYNNNWLSGAQFVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGG 277
Query: 70 R-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ R+ WTSFLK+RLNCS+PG++P+YFDEIQ
Sbjct: 278 QLLRDNWTSFLKARLNCSLPGEYPYYFDEIQ 308
>gi|1418942|emb|CAA66398.1| samaphorin G [Mus musculus]
Length = 1093
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|395519101|ref|XP_003763690.1| PREDICTED: semaphorin-5B isoform 1 [Sarcophilus harrisii]
Length = 1095
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEIPFYYNELQ 302
>gi|432101040|gb|ELK29347.1| Semaphorin-5B [Myotis davidii]
Length = 1069
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 223 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 281
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 282 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 324
>gi|148665472|gb|EDK97888.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_d [Mus musculus]
Length = 1184
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 263 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSR 321
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 322 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 364
>gi|45550455|ref|NP_611293.3| Semaphorin-5c, isoform A [Drosophila melanogaster]
gi|45445917|gb|AAF49966.3| Semaphorin-5c, isoform A [Drosophila melanogaster]
Length = 1093
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ L+ FV S G FVYF RE+A E ++CGK +YSRVARVCK D GG
Sbjct: 220 LRTKQYNNNWLSGAQFVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGG 279
Query: 70 R-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ R+ WTSFLK+RLNCS+PG++P+YFDEIQ
Sbjct: 280 QLLRDNWTSFLKARLNCSLPGEYPYYFDEIQ 310
>gi|355559395|gb|EHH16123.1| hypothetical protein EGK_11363 [Macaca mulatta]
Length = 1018
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|148665471|gb|EDK97887.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_c [Mus musculus]
Length = 1072
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|355746475|gb|EHH51089.1| hypothetical protein EGM_10415 [Macaca fascicularis]
Length = 981
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|221040856|dbj|BAH12129.1| unnamed protein product [Homo sapiens]
Length = 1205
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 313 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 371
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 372 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 414
>gi|119599864|gb|EAW79458.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_b [Homo sapiens]
Length = 1156
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|426341840|ref|XP_004036231.1| PREDICTED: semaphorin-5B isoform 1 [Gorilla gorilla gorilla]
gi|426341844|ref|XP_004036233.1| PREDICTED: semaphorin-5B isoform 3 [Gorilla gorilla gorilla]
Length = 1151
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|426341842|ref|XP_004036232.1| PREDICTED: semaphorin-5B isoform 2 [Gorilla gorilla gorilla]
Length = 1165
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 273 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 331
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 332 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 374
>gi|426219265|ref|XP_004003848.1| PREDICTED: semaphorin-5B [Ovis aries]
Length = 1145
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 252 DPAIYRSLGSRPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 310
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 311 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 353
>gi|395733234|ref|XP_003776202.1| PREDICTED: semaphorin-5B isoform 4 [Pongo abelii]
Length = 1205
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 313 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 371
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 372 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 414
>gi|373432659|ref|NP_001243276.1| semaphorin-5B isoform 2 [Homo sapiens]
Length = 1205
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 313 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 371
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 372 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 414
>gi|426341848|ref|XP_004036235.1| PREDICTED: semaphorin-5B isoform 5 [Gorilla gorilla gorilla]
Length = 1092
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|37181354|gb|AAQ88491.1| SEMA5B [Homo sapiens]
Length = 1092
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|403302116|ref|XP_003941710.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Saimiri boliviensis
boliviensis]
Length = 1205
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 313 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 371
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 372 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 414
>gi|395733230|ref|XP_003776200.1| PREDICTED: semaphorin-5B isoform 2 [Pongo abelii]
gi|395733232|ref|XP_003776201.1| PREDICTED: semaphorin-5B isoform 3 [Pongo abelii]
Length = 1151
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|297670189|ref|XP_002813259.1| PREDICTED: semaphorin-5B isoform 1 [Pongo abelii]
Length = 1057
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|91982767|ref|NP_001026872.2| semaphorin-5B isoform 1 [Homo sapiens]
gi|373432656|ref|NP_001243275.1| semaphorin-5B isoform 1 [Homo sapiens]
gi|212276522|sp|Q9P283.4|SEM5B_HUMAN RecName: Full=Semaphorin-5B
gi|119599863|gb|EAW79457.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_a [Homo sapiens]
gi|158256250|dbj|BAF84096.1| unnamed protein product [Homo sapiens]
Length = 1151
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|426341846|ref|XP_004036234.1| PREDICTED: semaphorin-5B isoform 4 [Gorilla gorilla gorilla]
Length = 1057
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|301774406|ref|XP_002922623.1| PREDICTED: semaphorin-5B-like [Ailuropoda melanoleuca]
Length = 1228
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 337 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 395
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 396 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 438
>gi|402859224|ref|XP_003894066.1| PREDICTED: semaphorin-5B [Papio anubis]
Length = 1057
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|397509701|ref|XP_003825255.1| PREDICTED: semaphorin-5B isoform 5 [Pan paniscus]
Length = 1092
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|397509693|ref|XP_003825251.1| PREDICTED: semaphorin-5B isoform 1 [Pan paniscus]
gi|397509695|ref|XP_003825252.1| PREDICTED: semaphorin-5B isoform 2 [Pan paniscus]
gi|397509697|ref|XP_003825253.1| PREDICTED: semaphorin-5B isoform 3 [Pan paniscus]
gi|397509699|ref|XP_003825254.1| PREDICTED: semaphorin-5B isoform 4 [Pan paniscus]
Length = 1151
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|296226097|ref|XP_002807661.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Callithrix jacchus]
Length = 1340
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 448 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 506
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 507 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 549
>gi|50418190|gb|AAH77726.1| Sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B [Homo sapiens]
Length = 1151
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|373432662|ref|NP_001243277.1| semaphorin-5B isoform 3 precursor [Homo sapiens]
Length = 1057
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|297285147|ref|XP_002802721.1| PREDICTED: semaphorin-5B-like [Macaca mulatta]
Length = 1057
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFTYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|221040072|dbj|BAH11799.1| unnamed protein product [Homo sapiens]
Length = 1057
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|168270554|dbj|BAG10070.1| semaphorin-5B precursor [synthetic construct]
Length = 1151
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 259 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 317
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 318 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 360
>gi|395844839|ref|XP_003795158.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Otolemur garnettii]
Length = 1312
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 420 DPAIYRSLGRGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 478
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 479 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 521
>gi|194664080|ref|XP_001788332.1| PREDICTED: semaphorin-5B [Bos taurus]
gi|297470929|ref|XP_002684855.1| PREDICTED: semaphorin-5B [Bos taurus]
gi|296491408|tpg|DAA33471.1| TPA: semaphorin 6B-like [Bos taurus]
Length = 1086
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 194 DPAIYRSLGSRPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 252
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 253 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 295
>gi|7959149|dbj|BAA95969.1| KIAA1445 protein [Homo sapiens]
Length = 1202
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 310 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 368
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 369 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 411
>gi|410970587|ref|XP_003991759.1| PREDICTED: semaphorin-5B [Felis catus]
Length = 1057
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|224054649|ref|XP_002189131.1| PREDICTED: semaphorin-5B [Taeniopygia guttata]
Length = 1092
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNF+++ G F YFFFRE AVE +CGK VYSR
Sbjct: 201 DPAIYRSLGNVPPLKTAQYNSKWLNEPNFIAAYDIGLFTYFFFRENAVEH-DCGKTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 260 VARVCKNDIGGRFLLEDTWTTFMKARLNCSRAGEIPFYYNELQ 302
>gi|410037363|ref|XP_516697.4| PREDICTED: semaphorin-5B isoform 2 [Pan troglodytes]
Length = 1112
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 256 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 314
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 315 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 357
>gi|344282215|ref|XP_003412870.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B-like [Loxodonta
africana]
Length = 1267
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 375 DPAIYRSLGNGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 433
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 434 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 476
>gi|281338840|gb|EFB14424.1| hypothetical protein PANDA_011602 [Ailuropoda melanoleuca]
Length = 1108
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 217 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 275
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 276 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 318
>gi|194222762|ref|XP_001500249.2| PREDICTED: semaphorin-5B [Equus caballus]
Length = 1125
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 233 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 291
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 292 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 334
>gi|440907947|gb|ELR58024.1| Semaphorin-5B, partial [Bos grunniens mutus]
Length = 1094
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 203 DPAIYRSLGSRPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 261
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 262 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 304
>gi|431919738|gb|ELK18095.1| Semaphorin-5B [Pteropus alecto]
Length = 915
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 302
>gi|10432890|dbj|BAB13869.1| unnamed protein product [Homo sapiens]
Length = 367
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 86 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 145
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 146 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 189
>gi|410651510|ref|NP_001258599.1| semaphorin-5A [Danio rerio]
Length = 1048
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CG+ V+SR
Sbjct: 169 DPAIYRSLGGLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGRTVFSR 227
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PF ++E+Q
Sbjct: 228 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEIPFNYNELQ 270
>gi|24234744|ref|NP_705872.1| semaphorin-6D isoform 5 precursor [Homo sapiens]
Length = 597
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|332235469|ref|XP_003266926.1| PREDICTED: semaphorin-6D isoform 5 [Nomascus leucogenys]
Length = 597
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|410348814|gb|JAA41011.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
Length = 476
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|449269442|gb|EMC80209.1| Semaphorin-5B [Columba livia]
Length = 1092
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNF+++ G F YFFFRE AVE +CGK VYSR
Sbjct: 201 DPAIYRSLGNVPPLRTAQYNSKWLNEPNFIAAYDIGLFTYFFFRENAVEH-DCGKTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 260 VARVCKNDIGGRFLLEDTWTTFMKARLNCSRAGEIPFYYNELQ 302
>gi|426378987|ref|XP_004056189.1| PREDICTED: semaphorin-6D isoform 7 [Gorilla gorilla gorilla]
Length = 597
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|355758196|gb|EHH61433.1| hypothetical protein EGM_19895, partial [Macaca fascicularis]
Length = 695
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 197 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 300
>gi|207667288|gb|ACI25101.1| semaphorin 5a, partial [Danio rerio]
Length = 959
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CG+ V+SR
Sbjct: 80 DPAIYRSLGGLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGRTVFSR 138
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCK D GG + WT+F+K+RLNCS PG+ PF ++E+Q
Sbjct: 139 AARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEIPFNYNELQ 181
>gi|380787929|gb|AFE65840.1| semaphorin-6D isoform 4 precursor [Macaca mulatta]
Length = 476
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|118093825|ref|XP_422096.2| PREDICTED: semaphorin-5B [Gallus gallus]
Length = 1092
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNF+++ G F YFFFRE AVE +CGK VYSR
Sbjct: 201 DPAIYRSLGNVPPLRTAQYNSKWLNEPNFIAAYDIGLFTYFFFRENAVEH-DCGKTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 260 VARVCKNDIGGRFLLEDTWTTFMKARLNCSRAGEIPFYYNELQ 302
>gi|24234732|ref|NP_079242.2| semaphorin-6D isoform 6 precursor [Homo sapiens]
gi|21634819|gb|AAM69449.1|AF389426_1 semaphorin 6D short isoform [Homo sapiens]
gi|119597738|gb|EAW77332.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_a [Homo sapiens]
Length = 476
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|326922994|ref|XP_003207727.1| PREDICTED: semaphorin-5B-like [Meleagris gallopavo]
Length = 1092
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNF+++ G F YFFFRE AVE +CGK VYSR
Sbjct: 201 DPAIYRSLGNVPPLRTAQYNSKWLNEPNFIAAYDIGLFTYFFFRENAVEH-DCGKTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 260 VARVCKNDIGGRFLLEDTWTTFMKARLNCSRAGEIPFYYNELQ 302
>gi|402874225|ref|XP_003900943.1| PREDICTED: semaphorin-6D isoform 4 [Papio anubis]
Length = 597
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|114656858|ref|XP_001164546.1| PREDICTED: semaphorin-6D isoform 1 [Pan troglodytes]
Length = 597
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|338716990|ref|XP_003363561.1| PREDICTED: semaphorin-6D [Equus caballus]
Length = 597
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|295849299|ref|NP_001171532.1| semaphorin-6C isoform 1 precursor [Homo sapiens]
Length = 962
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|410961297|ref|XP_003987220.1| PREDICTED: semaphorin-6D isoform 5 [Felis catus]
Length = 597
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|426378985|ref|XP_004056188.1| PREDICTED: semaphorin-6D isoform 6 [Gorilla gorilla gorilla]
Length = 1017
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|426233374|ref|XP_004010692.1| PREDICTED: semaphorin-6D isoform 5 [Ovis aries]
Length = 597
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|18462034|gb|AAL72100.1|AF339154_1 semaphorin Y [Homo sapiens]
gi|119573854|gb|EAW53469.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Homo sapiens]
Length = 962
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|16306552|ref|NP_112175.2| semaphorin-6C isoform 2 precursor [Homo sapiens]
gi|313104318|sp|Q9H3T2.4|SEM6C_HUMAN RecName: Full=Semaphorin-6C; AltName: Full=Semaphorin-Y; Short=Sema
Y; Flags: Precursor
gi|168270750|dbj|BAG10168.1| semaphorin-6C precursor [synthetic construct]
Length = 930
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|14017955|dbj|BAB47498.1| KIAA1869 protein [Homo sapiens]
Length = 935
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 203 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 262
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 263 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 306
>gi|403274355|ref|XP_003928945.1| PREDICTED: semaphorin-6D isoform 5 [Saimiri boliviensis
boliviensis]
Length = 1017
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|197102440|ref|NP_001126349.1| semaphorin-6D precursor [Pongo abelii]
gi|75041404|sp|Q5R7F5.1|SEM6D_PONAB RecName: Full=Semaphorin-6D; Flags: Precursor
gi|55731182|emb|CAH92305.1| hypothetical protein [Pongo abelii]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|359323439|ref|XP_003640099.1| PREDICTED: semaphorin-6D-like isoform 2 [Canis lupus familiaris]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|402874219|ref|XP_003900940.1| PREDICTED: semaphorin-6D isoform 1 [Papio anubis]
gi|402874221|ref|XP_003900941.1| PREDICTED: semaphorin-6D isoform 2 [Papio anubis]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|354485391|ref|XP_003504867.1| PREDICTED: semaphorin-6D isoform 3 [Cricetulus griseus]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|332235465|ref|XP_003266924.1| PREDICTED: semaphorin-6D isoform 3 [Nomascus leucogenys]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|194206688|ref|XP_001502498.2| PREDICTED: semaphorin-6D isoform 6 [Equus caballus]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|14133251|dbj|BAA96003.2| KIAA1479 protein [Homo sapiens]
Length = 1022
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 206 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 265
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 266 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 309
>gi|402874223|ref|XP_003900942.1| PREDICTED: semaphorin-6D isoform 3 [Papio anubis]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|332235467|ref|XP_003266925.1| PREDICTED: semaphorin-6D isoform 4 [Nomascus leucogenys]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|326926617|ref|XP_003209495.1| PREDICTED: semaphorin-6D-like isoform 2 [Meleagris gallopavo]
Length = 1016
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNIGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|359323445|ref|XP_003640102.1| PREDICTED: semaphorin-6D-like isoform 5 [Canis lupus familiaris]
Length = 597
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|403274349|ref|XP_003928942.1| PREDICTED: semaphorin-6D isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|426378977|ref|XP_004056184.1| PREDICTED: semaphorin-6D isoform 2 [Gorilla gorilla gorilla]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|359323441|ref|XP_003640100.1| PREDICTED: semaphorin-6D-like isoform 3 [Canis lupus familiaris]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|109080995|ref|XP_001112381.1| PREDICTED: semaphorin-6D-like isoform 5 [Macaca mulatta]
gi|109080997|ref|XP_001112444.1| PREDICTED: semaphorin-6D-like isoform 7 [Macaca mulatta]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|40385875|ref|NP_954708.1| semaphorin-6D isoform 2 precursor [Mus musculus]
gi|38173713|gb|AAH60680.1| Sema6d protein [Mus musculus]
gi|40217483|dbj|BAD05169.1| semaphorin 6D-2 [Mus musculus]
gi|148696176|gb|EDL28123.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_e [Mus musculus]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|149691987|ref|XP_001502466.1| PREDICTED: semaphorin-6D isoform 2 [Equus caballus]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|410961291|ref|XP_003987217.1| PREDICTED: semaphorin-6D isoform 2 [Felis catus]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|410961289|ref|XP_003987216.1| PREDICTED: semaphorin-6D isoform 1 [Felis catus]
gi|410961295|ref|XP_003987219.1| PREDICTED: semaphorin-6D isoform 4 [Felis catus]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|403274353|ref|XP_003928944.1| PREDICTED: semaphorin-6D isoform 4 [Saimiri boliviensis
boliviensis]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|332235461|ref|XP_003266922.1| PREDICTED: semaphorin-6D isoform 1 [Nomascus leucogenys]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|380787737|gb|AFE65744.1| semaphorin-6D isoform 3 precursor [Macaca mulatta]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|332235463|ref|XP_003266923.1| PREDICTED: semaphorin-6D isoform 2 [Nomascus leucogenys]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|426378975|ref|XP_004056183.1| PREDICTED: semaphorin-6D isoform 1 [Gorilla gorilla gorilla]
gi|426378979|ref|XP_004056185.1| PREDICTED: semaphorin-6D isoform 3 [Gorilla gorilla gorilla]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|426331396|ref|XP_004026667.1| PREDICTED: semaphorin-6C [Gorilla gorilla gorilla]
Length = 930
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|426233368|ref|XP_004010689.1| PREDICTED: semaphorin-6D isoform 2 [Ovis aries]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|334321145|ref|XP_003340096.1| PREDICTED: semaphorin-6D isoform 2 [Monodelphis domestica]
Length = 1008
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|18462030|gb|AAL72098.1|AF339152_1 semaphorin Y short isoform 1 [Homo sapiens]
gi|119573855|gb|EAW53470.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Homo sapiens]
gi|119573857|gb|EAW53472.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Homo sapiens]
Length = 930
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|410961299|ref|XP_003987221.1| PREDICTED: semaphorin-6D isoform 6 [Felis catus]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|380787867|gb|AFE65809.1| semaphorin-6D isoform 4 precursor [Macaca mulatta]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|354485397|ref|XP_003504870.1| PREDICTED: semaphorin-6D isoform 6 [Cricetulus griseus]
Length = 1030
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|332810239|ref|XP_001170541.2| PREDICTED: semaphorin-6C isoform 5 [Pan troglodytes]
Length = 962
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|114656848|ref|XP_001164888.1| PREDICTED: semaphorin-6D isoform 9 [Pan troglodytes]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|109080999|ref|XP_001112417.1| PREDICTED: semaphorin-6D-like isoform 6 [Macaca mulatta]
gi|387273427|gb|AFJ70208.1| semaphorin-6D isoform 2 precursor [Macaca mulatta]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|109080993|ref|XP_001112343.1| PREDICTED: semaphorin-6D-like isoform 4 [Macaca mulatta]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|40385869|ref|NP_766125.2| semaphorin-6D isoform 1 precursor [Mus musculus]
gi|60729698|pir||JC8059 semaphorin 6D-1 - mouse
gi|40217481|dbj|BAD05168.1| semaphorin 6D-1 [Mus musculus]
gi|148696173|gb|EDL28120.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_c [Mus musculus]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|397522979|ref|XP_003831524.1| PREDICTED: semaphorin-6D isoform 5 [Pan paniscus]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|334321147|ref|XP_003340097.1| PREDICTED: semaphorin-6D isoform 3 [Monodelphis domestica]
Length = 995
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|338716988|ref|XP_003363560.1| PREDICTED: semaphorin-6D [Equus caballus]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|114656842|ref|XP_001164699.1| PREDICTED: semaphorin-6D isoform 4 [Pan troglodytes]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|380816706|gb|AFE80227.1| semaphorin-6D isoform 4 precursor [Macaca mulatta]
Length = 1086
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|354485399|ref|XP_003504871.1| PREDICTED: semaphorin-6D isoform 7 [Cricetulus griseus]
Length = 1054
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|354485389|ref|XP_003504866.1| PREDICTED: semaphorin-6D isoform 2 [Cricetulus griseus]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|126278227|ref|XP_001380368.1| PREDICTED: semaphorin-6D isoform 1 [Monodelphis domestica]
Length = 1070
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|24234735|ref|NP_705869.1| semaphorin-6D isoform 2 precursor [Homo sapiens]
gi|21634821|gb|AAM69450.1|AF389427_1 semaphorin 6D isoform 2 [Homo sapiens]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|395822127|ref|XP_003784375.1| PREDICTED: semaphorin-6D isoform 2 [Otolemur garnettii]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|296213928|ref|XP_002753477.1| PREDICTED: semaphorin-6D isoform 5 [Callithrix jacchus]
gi|296213930|ref|XP_002753478.1| PREDICTED: semaphorin-6D isoform 6 [Callithrix jacchus]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|24234738|ref|NP_705870.1| semaphorin-6D isoform 3 precursor [Homo sapiens]
gi|21634823|gb|AAM69451.1|AF389428_1 semaphorin 6D isoform 3 [Homo sapiens]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|449272107|gb|EMC82195.1| Semaphorin-6D [Columba livia]
Length = 1091
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|397522975|ref|XP_003831522.1| PREDICTED: semaphorin-6D isoform 3 [Pan paniscus]
gi|397522977|ref|XP_003831523.1| PREDICTED: semaphorin-6D isoform 4 [Pan paniscus]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|355558412|gb|EHH15192.1| hypothetical protein EGK_01250, partial [Macaca mulatta]
Length = 718
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|354485393|ref|XP_003504868.1| PREDICTED: semaphorin-6D isoform 4 [Cricetulus griseus]
Length = 990
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 174 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 233
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 234 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 277
>gi|114656840|ref|XP_523068.2| PREDICTED: semaphorin-6D isoform 11 [Pan troglodytes]
gi|332844075|ref|XP_003314766.1| PREDICTED: semaphorin-6D [Pan troglodytes]
gi|410299638|gb|JAA28419.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410299640|gb|JAA28420.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410299642|gb|JAA28421.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410299644|gb|JAA28422.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410348812|gb|JAA41010.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410348816|gb|JAA41012.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|426378981|ref|XP_004056186.1| PREDICTED: semaphorin-6D isoform 4 [Gorilla gorilla gorilla]
gi|426378983|ref|XP_004056187.1| PREDICTED: semaphorin-6D isoform 5 [Gorilla gorilla gorilla]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|410961293|ref|XP_003987218.1| PREDICTED: semaphorin-6D isoform 3 [Felis catus]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|397522981|ref|XP_003831525.1| PREDICTED: semaphorin-6D isoform 6 [Pan paniscus]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|40385877|ref|NP_954710.1| semaphorin-6D isoform 6 precursor [Mus musculus]
gi|40217487|dbj|BAD05171.1| semaphorin 6D-6 [Mus musculus]
Length = 1054
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|332810237|ref|XP_001170584.2| PREDICTED: semaphorin-6C isoform 7 [Pan troglodytes]
Length = 930
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|24234729|ref|NP_065909.1| semaphorin-6D isoform 1 precursor [Homo sapiens]
gi|312222667|ref|NP_001185928.1| semaphorin-6D isoform 1 precursor [Homo sapiens]
gi|21634827|gb|AAM69453.1|AF389430_1 semaphorin 6D isoform 1 [Homo sapiens]
gi|152012525|gb|AAI50254.1| SEMA6D protein [Homo sapiens]
gi|168270568|dbj|BAG10077.1| semaphorin-6D precursor [synthetic construct]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|24234741|ref|NP_705871.1| semaphorin-6D isoform 4 precursor [Homo sapiens]
gi|74715611|sp|Q8NFY4.1|SEM6D_HUMAN RecName: Full=Semaphorin-6D; Flags: Precursor
gi|21634825|gb|AAM69452.1|AF389429_1 semaphorin 6D isoform 4 [Homo sapiens]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|426233370|ref|XP_004010690.1| PREDICTED: semaphorin-6D isoform 3 [Ovis aries]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|397492966|ref|XP_003817387.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6C [Pan paniscus]
Length = 885
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|363737723|ref|XP_001231859.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6D isoform 1 [Gallus
gallus]
Length = 1078
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|149691977|ref|XP_001502464.1| PREDICTED: semaphorin-6D isoform 1 [Equus caballus]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|359323443|ref|XP_003640101.1| PREDICTED: semaphorin-6D-like isoform 4 [Canis lupus familiaris]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|359323437|ref|XP_003640098.1| PREDICTED: semaphorin-6D-like isoform 1 [Canis lupus familiaris]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|397522971|ref|XP_003831520.1| PREDICTED: semaphorin-6D isoform 1 [Pan paniscus]
gi|397522973|ref|XP_003831521.1| PREDICTED: semaphorin-6D isoform 2 [Pan paniscus]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|354485387|ref|XP_003504865.1| PREDICTED: semaphorin-6D isoform 1 [Cricetulus griseus]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|326926619|ref|XP_003209496.1| PREDICTED: semaphorin-6D-like isoform 3 [Meleagris gallopavo]
Length = 1003
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNIGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|326926615|ref|XP_003209494.1| PREDICTED: semaphorin-6D-like isoform 1 [Meleagris gallopavo]
Length = 1078
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNIGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|291403082|ref|XP_002717923.1| PREDICTED: semaphorin 6D isoform 5 [Oryctolagus cuniculus]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|114656844|ref|XP_001164625.1| PREDICTED: semaphorin-6D isoform 3 [Pan troglodytes]
gi|114656846|ref|XP_001164924.1| PREDICTED: semaphorin-6D isoform 10 [Pan troglodytes]
Length = 1011
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|109080991|ref|XP_001112236.1| PREDICTED: semaphorin-6D-like isoform 3 [Macaca mulatta]
gi|297296357|ref|XP_002804803.1| PREDICTED: semaphorin-6D-like [Macaca mulatta]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|296213926|ref|XP_002753476.1| PREDICTED: semaphorin-6D isoform 4 [Callithrix jacchus]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|28972762|dbj|BAC65797.1| mKIAA1479 protein [Mus musculus]
Length = 1009
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 206 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 265
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 266 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 309
>gi|426233366|ref|XP_004010688.1| PREDICTED: semaphorin-6D isoform 1 [Ovis aries]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|395822129|ref|XP_003784376.1| PREDICTED: semaphorin-6D isoform 3 [Otolemur garnettii]
Length = 998
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|395822125|ref|XP_003784374.1| PREDICTED: semaphorin-6D isoform 1 [Otolemur garnettii]
Length = 1073
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|334321149|ref|XP_003340098.1| PREDICTED: semaphorin-6D isoform 4 [Monodelphis domestica]
Length = 1014
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|432850539|ref|XP_004066803.1| PREDICTED: semaphorin-5B-like [Oryzias latipes]
Length = 1089
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+IYR PL+T QY+S LN P+FVSS G F YFF RE+AVE +CGK V+SR
Sbjct: 195 DPVIYRSLGNMPPLRTAQYNSKWLNEPHFVSSYGIGPFAYFFLRESAVEN-DCGKMVFSR 253
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 254 VARVCKNDMGGRFLLEDTWTTFMKARLNCSRSGEIPFYYNELQ 296
>gi|40385871|ref|NP_954709.1| semaphorin-6D isoform 5 precursor [Mus musculus]
gi|40217485|dbj|BAD05170.1| semaphorin 6D-5 [Mus musculus]
gi|148696171|gb|EDL28118.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_a [Mus musculus]
Length = 1030
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|291403076|ref|XP_002717920.1| PREDICTED: semaphorin 6D isoform 2 [Oryctolagus cuniculus]
Length = 1054
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|354485395|ref|XP_003504869.1| PREDICTED: semaphorin-6D isoform 5 [Cricetulus griseus]
Length = 1017
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|291403080|ref|XP_002717922.1| PREDICTED: semaphorin 6D isoform 4 [Oryctolagus cuniculus]
Length = 1030
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|300798537|ref|NP_001178062.1| semaphorin-6D precursor [Bos taurus]
gi|296483145|tpg|DAA25260.1| TPA: sema domain, transmembrane domain (TM), and cytoplasmic
domain, (semaphorin) 6D [Bos taurus]
Length = 1073
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|291403078|ref|XP_002717921.1| PREDICTED: semaphorin 6D isoform 3 [Oryctolagus cuniculus]
Length = 1017
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|311244800|ref|XP_003121572.1| PREDICTED: semaphorin-6D [Sus scrofa]
Length = 1073
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|426233372|ref|XP_004010691.1| PREDICTED: semaphorin-6D isoform 4 [Ovis aries]
Length = 1017
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|291403074|ref|XP_002717919.1| PREDICTED: semaphorin 6D isoform 1 [Oryctolagus cuniculus]
Length = 1073
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|157820913|ref|NP_001101238.1| semaphorin-6D precursor [Rattus norvegicus]
gi|149023159|gb|EDL80053.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 990
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 174 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 233
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 234 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 277
>gi|148696172|gb|EDL28119.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_b [Mus musculus]
gi|148696174|gb|EDL28121.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_b [Mus musculus]
Length = 595
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|326926621|ref|XP_003209497.1| PREDICTED: semaphorin-6D-like isoform 4 [Meleagris gallopavo]
Length = 1022
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNIGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|403274347|ref|XP_003928941.1| PREDICTED: semaphorin-6D isoform 1 [Saimiri boliviensis
boliviensis]
gi|403274351|ref|XP_003928943.1| PREDICTED: semaphorin-6D isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1073
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|296213924|ref|XP_002753475.1| PREDICTED: semaphorin-6D isoform 3 [Callithrix jacchus]
Length = 1073
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|395822131|ref|XP_003784377.1| PREDICTED: semaphorin-6D isoform 4 [Otolemur garnettii]
Length = 1017
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|158261087|dbj|BAF82721.1| unnamed protein product [Homo sapiens]
Length = 1073
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DTVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|40385879|ref|NP_954711.1| semaphorin-6D isoform 4 precursor [Mus musculus]
gi|81894127|sp|Q76KF0.1|SEM6D_MOUSE RecName: Full=Semaphorin-6D; Flags: Precursor
gi|40217489|dbj|BAD05172.1| Semaphorin 6D-4 [Mus musculus]
gi|148696175|gb|EDL28122.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_d [Mus musculus]
Length = 1073
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|444515088|gb|ELV10750.1| Semaphorin-6C [Tupaia chinensis]
Length = 904
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 178 DAVVYRSLGLQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 237
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 238 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSAFYFDVLQ 281
>gi|390476698|ref|XP_002759945.2| PREDICTED: semaphorin-6C isoform 1 [Callithrix jacchus]
Length = 1040
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 278 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 337
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 338 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 381
>gi|351698028|gb|EHB00947.1| Semaphorin-5B [Heterocephalus glaber]
Length = 1002
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 201 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 259
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F K+RLNCS PG+ PFY++E+Q
Sbjct: 260 VARVCKNDVGGRFLLEDTWTTFTKARLNCSRPGEVPFYYNELQ 302
>gi|37724884|gb|AAO18686.1| semaphorin 2a [Trichinella spiralis]
Length = 676
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 72/109 (66%), Gaps = 13/109 (11%)
Query: 4 IIYREPLQTEQYDSMS------------LNAPNFVSSLTQGD-FVYFFFRETAVEFINCG 50
+IYR PL E+ D M L PNFV++ GD +VY+FFRE AVE+++CG
Sbjct: 159 VIYRPPLLNERGDMMHPYMSTAHTDSKWLKEPNFVAAFDVGDGYVYYFFRELAVEYMSCG 218
Query: 51 KAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+YSRV R+CK D GG + + WTSF K+RLNCS+ G+FPFYF+EIQ
Sbjct: 219 TVIYSRVGRICKSDTGGRNLLKQTWTSFFKARLNCSISGEFPFYFNEIQ 267
>gi|332220234|ref|XP_003259262.1| PREDICTED: semaphorin-6C isoform 1 [Nomascus leucogenys]
Length = 962
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|297663678|ref|XP_002810296.1| PREDICTED: semaphorin-6C isoform 1 [Pongo abelii]
Length = 964
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|169410916|gb|ACA57926.1| Sema domain, transmembrane domain, and cytoplasmic domain, 6C
(predicted) [Callicebus moloch]
Length = 962
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|388452398|ref|NP_001252644.1| semaphorin-6C precursor [Macaca mulatta]
gi|387540744|gb|AFJ70999.1| semaphorin-6C isoform 2 precursor [Macaca mulatta]
Length = 930
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|395729875|ref|XP_003775630.1| PREDICTED: semaphorin-6C [Pongo abelii]
Length = 932
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|281182832|ref|NP_001162414.1| semaphorin-6C precursor [Papio anubis]
gi|163781010|gb|ABY40786.1| sema domain, transmembrane domain, and cytoplasmic domain, 6C
(predicted) [Papio anubis]
Length = 962
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|339249307|ref|XP_003373641.1| semaphorin-2A [Trichinella spiralis]
gi|316970190|gb|EFV54168.1| semaphorin-2A [Trichinella spiralis]
Length = 738
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 72/109 (66%), Gaps = 13/109 (11%)
Query: 4 IIYREPLQTEQYDSMS------------LNAPNFVSSLTQGD-FVYFFFRETAVEFINCG 50
+IYR PL E+ D M L PNFV++ GD +VY+FFRE AVE+++CG
Sbjct: 225 VIYRPPLLNERGDMMHPYMSTAHTDSKWLKEPNFVAAFDVGDGYVYYFFRELAVEYMSCG 284
Query: 51 KAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+YSRV R+CK D GG + + WTSF K+RLNCS+ G+FPFYF+EIQ
Sbjct: 285 TVIYSRVGRICKSDTGGRNLLKQTWTSFFKARLNCSISGEFPFYFNEIQ 333
>gi|395503195|ref|XP_003755957.1| PREDICTED: semaphorin-6D-like [Sarcophilus harrisii]
Length = 1198
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GKAVYSR
Sbjct: 327 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSR 386
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 387 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 430
>gi|339248595|ref|XP_003373285.1| semaphorin-1A [Trichinella spiralis]
gi|316970638|gb|EFV54538.1| semaphorin-1A [Trichinella spiralis]
Length = 600
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 74/103 (71%), Gaps = 7/103 (6%)
Query: 3 PIIYREPL-------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
P+IYR+PL +T++YD L+ P+FVSSL GD +YF+FRE A E+ NCG AV+S
Sbjct: 114 PLIYRKPLSGPTAELRTKRYDMKFLSDPHFVSSLDDGDSIYFWFREAAAEYNNCGTAVFS 173
Query: 56 RVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEI 98
R+ARVCK D+G + WT+++K+RLNCS+ G PFYF+EI
Sbjct: 174 RIARVCKSDQGDHKPDADTWTTYIKARLNCSLSGHVPFYFNEI 216
>gi|344275448|ref|XP_003409524.1| PREDICTED: semaphorin-6C isoform 2 [Loxodonta africana]
Length = 935
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|25742793|ref|NP_059004.1| semaphorin-6C precursor [Rattus norvegicus]
gi|8134706|sp|Q9WTL3.1|SEM6C_RAT RecName: Full=Semaphorin-6C; AltName: Full=Semaphorin-Y; Short=Sema
Y; Flags: Precursor
gi|4521274|dbj|BAA76293.2| semaphorin Y [Rattus norvegicus]
gi|149030696|gb|EDL85733.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
gi|149030697|gb|EDL85734.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
gi|149030698|gb|EDL85735.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
gi|149030699|gb|EDL85736.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
gi|149030700|gb|EDL85737.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
Length = 960
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 197 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGDHVYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 300
>gi|317419854|emb|CBN81890.1| Semaphorin-5A [Dicentrarchus labrax]
Length = 1108
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CG+ V+SR
Sbjct: 199 DPAIYRSLGGLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGRTVFSR 257
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVCK D GG + WT+F+K+RLNCS PG+ PF ++E+Q
Sbjct: 258 AGRVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEIPFNYNELQ 300
>gi|134085184|emb|CAM60072.1| si:ch211-278n20.1 [Danio rerio]
Length = 588
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ ++ GDFVYFFFRE A E N GKAVYSR
Sbjct: 197 DAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGDFVYFFFREIAAEHNNLGKAVYSR 256
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
VAR+CK D GG R WTSF+K+RLNCSVPG+ FYFD +Q
Sbjct: 257 VARICKNDMGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQA 301
>gi|395856119|ref|XP_003800485.1| PREDICTED: semaphorin-6C [Otolemur garnettii]
Length = 1012
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|311254342|ref|XP_003125816.1| PREDICTED: semaphorin-6C isoform 2 [Sus scrofa]
Length = 966
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|348512188|ref|XP_003443625.1| PREDICTED: semaphorin-5A [Oreochromis niloticus]
Length = 1081
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CG+ V+SR
Sbjct: 199 DPAIYRSLGGLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGRTVFSR 257
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVCK D GG + WT+F+K+RLNCS PG+ PF ++E+Q
Sbjct: 258 AGRVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEIPFNYNELQ 300
>gi|348556790|ref|XP_003464203.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B-like [Cavia
porcellus]
Length = 1224
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV++ G F YF RE AVE +CG+ VYSR
Sbjct: 332 DPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAYFLLRENAVEH-DCGRTVYSR 390
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 391 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 433
>gi|354473032|ref|XP_003498740.1| PREDICTED: semaphorin-6C-like [Cricetulus griseus]
Length = 974
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 69/104 (66%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 197 DAVVYRSLGPQPPLRSAKYDSKWLREPTFVYALEHGDHVYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 300
>gi|359063809|ref|XP_002686090.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6C [Bos taurus]
Length = 963
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 197 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 300
>gi|358411330|ref|XP_002684117.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6C [Bos taurus]
Length = 963
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 197 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 300
>gi|348536926|ref|XP_003455946.1| PREDICTED: semaphorin-5B-like [Oreochromis niloticus]
Length = 1092
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+IYR PL+T QY+S LN P+FVS G F YFF RETAVE +CGK V+SR
Sbjct: 198 DPVIYRSLGNMPPLRTAQYNSKWLNEPHFVSVYEIGRFAYFFLRETAVEN-DCGKMVFSR 256
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 257 VARVCKNDMGGRFLLEDTWTTFMKARLNCSRSGEIPFYYNELQ 299
>gi|403302844|ref|XP_003942060.1| PREDICTED: semaphorin-6C [Saimiri boliviensis boliviensis]
Length = 1053
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 391 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 450
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 451 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 494
>gi|344275446|ref|XP_003409523.1| PREDICTED: semaphorin-6C isoform 1 [Loxodonta africana]
Length = 967
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|194036253|ref|XP_001929695.1| PREDICTED: semaphorin-6C isoform 1 [Sus scrofa]
Length = 934
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|281352880|gb|EFB28464.1| hypothetical protein PANDA_007998 [Ailuropoda melanoleuca]
Length = 879
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|134085188|emb|CAM60074.1| si:ch211-278n20.1 [Danio rerio]
Length = 659
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ ++ GDFVYFFFRE A E N GKAVYSR
Sbjct: 197 DAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGDFVYFFFREIAAEHNNLGKAVYSR 256
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
VAR+CK D GG R WTSF+K+RLNCSVPG+ FYFD +Q
Sbjct: 257 VARICKNDMGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQA 301
>gi|301767918|ref|XP_002919370.1| PREDICTED: semaphorin-6C-like [Ailuropoda melanoleuca]
Length = 886
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|296489605|tpg|DAA31718.1| TPA: sema domain, transmembrane domain (TM), and cytoplasmic
domain, (semaphorin) 6C [Bos taurus]
Length = 931
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 197 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 300
>gi|348572235|ref|XP_003471899.1| PREDICTED: semaphorin-6D-like isoform 3 [Cavia porcellus]
Length = 998
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ + G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DHVIYRSMGDGSALRTIRYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R ++ WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLDKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|158148925|dbj|BAF81996.1| Semaphorin 6D-S [Danio rerio]
Length = 999
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ ++ GDFVYFFFRE A E N GKAVYSR
Sbjct: 197 DAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGDFVYFFFREIAAEHNNLGKAVYSR 256
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
VAR+CK D GG R WTSF+K+RLNCSVPG+ FYFD +Q
Sbjct: 257 VARICKNDMGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQA 301
>gi|4521231|dbj|BAA76295.1| semaphorin Y short isoform [Rattus norvegicus]
gi|149030706|gb|EDL85743.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
gi|149030707|gb|EDL85744.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
gi|149030708|gb|EDL85745.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
gi|149030709|gb|EDL85746.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
gi|149030710|gb|EDL85747.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 197 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGDHVYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 300
>gi|348572239|ref|XP_003471901.1| PREDICTED: semaphorin-6D-like isoform 5 [Cavia porcellus]
Length = 1017
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ + G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DHVIYRSMGDGSALRTIRYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R ++ WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLDKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|348572237|ref|XP_003471900.1| PREDICTED: semaphorin-6D-like isoform 4 [Cavia porcellus]
Length = 990
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ + G++VYFFFRE AVE N GKAVYSR
Sbjct: 174 DHVIYRSMGDGSALRTIRYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSR 233
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R ++ WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 234 VARICKNDMGGSQRVLDKHWTSFLKARLNCSVPGDSFFYFDVLQ 277
>gi|348572233|ref|XP_003471898.1| PREDICTED: semaphorin-6D-like isoform 2 [Cavia porcellus]
Length = 1011
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ + G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DHVIYRSMGDGSALRTIRYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R ++ WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLDKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|307212164|gb|EFN88018.1| Semaphorin-5A [Harpegnathos saltator]
Length = 1025
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 7/103 (6%)
Query: 2 DPIIYRE----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRV 57
D IYR ++T YDS LN P FV S D+VYF FRE AVE +NCGK +YSR+
Sbjct: 122 DKAIYRTLVSPNIRTLYYDSKWLNDPQFVGSFEAEDYVYFLFREIAVEHMNCGKIIYSRI 181
Query: 58 ARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
ARVCKYD G ++ R WT+F K+RLNCS+PG+FPFY+DEIQ
Sbjct: 182 ARVCKYDPG--YKIVEREWTTFRKARLNCSLPGEFPFYYDEIQ 222
>gi|158517921|ref|NP_001017682.2| semaphorin-6D precursor [Danio rerio]
gi|158148923|dbj|BAF81995.1| Semaphorin 6D-L [Danio rerio]
Length = 1018
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ ++ GDFVYFFFRE A E N GKAVYSR
Sbjct: 197 DAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGDFVYFFFREIAAEHNNLGKAVYSR 256
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
VAR+CK D GG R WTSF+K+RLNCSVPG+ FYFD +Q
Sbjct: 257 VARICKNDMGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQA 301
>gi|301764375|ref|XP_002917602.1| PREDICTED: semaphorin-6D-like isoform 3 [Ailuropoda melanoleuca]
Length = 998
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFF+E AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFQEIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|348572231|ref|XP_003471897.1| PREDICTED: semaphorin-6D-like isoform 1 [Cavia porcellus]
Length = 1073
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ + G++VYFFFRE AVE N GKAVYSR
Sbjct: 195 DHVIYRSMGDGSALRTIRYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R ++ WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLDKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|301764373|ref|XP_002917601.1| PREDICTED: semaphorin-6D-like isoform 2 [Ailuropoda melanoleuca]
Length = 1017
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFF+E AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFQEIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|47223515|emb|CAF98002.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1105
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CG+ V+SR
Sbjct: 204 DPAIYRSLGGLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGRMVFSR 262
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVCK D GG + WT+F+K+RLNCS PG+ PF ++E+Q
Sbjct: 263 AGRVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFNYNELQ 305
>gi|301764371|ref|XP_002917600.1| PREDICTED: semaphorin-6D-like isoform 1 [Ailuropoda melanoleuca]
Length = 1073
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFF+E AVE N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFQEIAVEHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|183637581|gb|ACC64583.1| Sema domain, transmembrane domain, and cytoplasmic domain, 6C
(predicted) [Rhinolophus ferrumequinum]
Length = 959
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEYGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSAFYFDVLQ 301
>gi|327291725|ref|XP_003230571.1| PREDICTED: semaphorin-6D-like, partial [Anolis carolinensis]
Length = 216
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 6/104 (5%)
Query: 2 DPIIY-----REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IY L+T +YDS + P+F+ ++ G+FVYFFFRE A+E N GKAVYSR
Sbjct: 46 DAVIYLNMGDGSALRTIKYDSKWIKEPHFLHAIEYGNFVYFFFREIAMEHNNLGKAVYSR 105
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 106 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 149
>gi|291387213|ref|XP_002710189.1| PREDICTED: sema domain, transmembrane domain (TM), and cytoplasmic
domain, (semaphorin) 6A [Oryctolagus cuniculus]
Length = 1021
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDHGDYIYFFFREMAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|432931028|ref|XP_004081579.1| PREDICTED: semaphorin-5B-like [Oryzias latipes]
Length = 1120
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+IYR PL+T QY+S LN P+F+S+ G F +FF RE AVE +CGK VYSR
Sbjct: 227 DPVIYRSLGGMPPLRTAQYNSKWLNEPHFISAYEIGLFTFFFLRENAVEH-DCGKTVYSR 285
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 286 VARVCKNDIGGRFLLEDTWTTFMKARLNCSRSGEIPFYYNELQ 328
>gi|449471083|ref|XP_004176943.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6D [Taeniopygia guttata]
Length = 1081
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNTLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|348527298|ref|XP_003451156.1| PREDICTED: semaphorin-6A [Oreochromis niloticus]
Length = 1021
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GDF+YFFFRE A+E+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVNYGDFIYFFFREIAMEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK DRGG P +WTSFLKSRLNCS+PGD FYF+ +Q
Sbjct: 253 RVARVCKNDRGGSPRVLEKQWTSFLKSRLNCSIPGDSHFYFNILQA 298
>gi|297675811|ref|XP_002815852.1| PREDICTED: semaphorin-6A isoform 2 [Pongo abelii]
gi|297675813|ref|XP_002815853.1| PREDICTED: semaphorin-6A isoform 3 [Pongo abelii]
Length = 1030
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/105 (53%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GDF+YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDFIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|149612842|ref|XP_001517979.1| PREDICTED: semaphorin-6D [Ornithorhynchus anatinus]
Length = 549
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ + G+FVYFFFRE AVE + GKAVYSR
Sbjct: 195 DAVIYRSLGDGSALRTIKYDSKWIKEPHFLHATEYGNFVYFFFREIAVEHNSLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDVGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQA 299
>gi|432873676|ref|XP_004072335.1| PREDICTED: semaphorin-6A-like [Oryzias latipes]
Length = 1016
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GDF+YFFFRE A+E+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVNYGDFIYFFFREIAMEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK DRGG P +WTSFLKSRLNCS+PGD FYF+ +Q
Sbjct: 253 RVARVCKNDRGGSPRVLEKQWTSFLKSRLNCSIPGDSHFYFNILQA 298
>gi|410897551|ref|XP_003962262.1| PREDICTED: semaphorin-5B-like [Takifugu rubripes]
Length = 964
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+IYR PL+T QY+S LN P+F+S+ G F +FF RE AVE +CGK VYSR
Sbjct: 247 DPVIYRSMGGMPPLRTAQYNSKWLNEPHFISAYDIGLFTFFFLRENAVEH-DCGKTVYSR 305
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 306 VARVCKNDIGGRFLLEDTWTTFMKARLNCSRSGEIPFYYNELQ 348
>gi|74145448|dbj|BAE36165.1| unnamed protein product [Mus musculus]
Length = 777
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 43 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSR 102
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 103 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 146
>gi|148706836|gb|EDL38783.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_d [Mus musculus]
Length = 858
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 94 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSR 153
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 154 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 197
>gi|348534869|ref|XP_003454924.1| PREDICTED: semaphorin-5B [Oreochromis niloticus]
Length = 1103
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+IYR PL+T QY+S LN P+F+S+ G F +FF RE AVE +CGK VYSR
Sbjct: 210 DPVIYRSLGGMPPLRTAQYNSKWLNEPHFISAYDIGLFTFFFLRENAVEH-DCGKTVYSR 268
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 269 VARVCKNDIGGRFLLEDTWTTFMKARLNCSRSGEIPFYYNELQ 311
>gi|410908903|ref|XP_003967930.1| PREDICTED: semaphorin-5A-like [Takifugu rubripes]
Length = 1082
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFV+S G+F YFFFRE AVE +CG+ V+SR
Sbjct: 199 DPAIYRSLGGLPPLRTAQYNSKWLNEPNFVASYDIGNFTYFFFRENAVEH-DCGRMVFSR 257
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVCK D GG + WT+F+K+RLNCS PG+ PF ++E+Q
Sbjct: 258 AGRVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEIPFNYNELQ 300
>gi|433660824|ref|NP_001258953.1| semaphorin-6C isoform 1 precursor [Mus musculus]
Length = 963
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 199 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSR 258
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 259 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 302
>gi|148706835|gb|EDL38782.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Mus musculus]
Length = 968
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 204 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSR 263
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 264 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 307
>gi|147899938|ref|NP_001089133.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D precursor [Xenopus laevis]
gi|83642779|dbj|BAE54371.1| semaphorin 6D4 [Xenopus laevis]
gi|213626596|gb|AAI69687.1| Semaphorin 6D4 [Xenopus laevis]
Length = 1085
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ ++ G+++YFFFRE AVE N GKAV+SR
Sbjct: 195 DAVIYRSMGDGFALRTIKYDSKWLKEPHFLHAIEYGNYIYFFFREIAVEHNNLGKAVHSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSF+K+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDLGGSQRVLEKHWTSFVKTRLNCSVPGDSFFYFDVLQ 298
>gi|391342866|ref|XP_003745736.1| PREDICTED: semaphorin-5A-like [Metaseiulus occidentalis]
Length = 979
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T QY+ L+ P FV+S GDFVYFFFRE A+E+ +CGK ++SR+ RVCK D+G P+
Sbjct: 191 LRTPQYNPEYLSNPQFVNSFEVGDFVYFFFRENAIEYSSCGKNIFSRIGRVCKNDQGSPY 250
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++ WT+FLK RLNCS+PG PFYF+E+Q
Sbjct: 251 NSKS-WTTFLKGRLNCSLPGAIPFYFNEMQ 279
>gi|432927861|ref|XP_004081063.1| PREDICTED: semaphorin-5A-like [Oryzias latipes]
Length = 1078
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS +F YFFFRE AVE +CG+ V+SR
Sbjct: 199 DPAIYRSLGGLPPLRTAQYNSKWLNEPNFVSSYDIANFTYFFFRENAVEH-DCGRTVFSR 257
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
V RVCK D GG + WT+F+K+R+NCS PG+ PF ++E+Q
Sbjct: 258 VGRVCKNDIGGRFLLEDTWTTFMKARMNCSRPGEIPFNYNELQ 300
>gi|395514224|ref|XP_003761319.1| PREDICTED: semaphorin-6A [Sarcophilus harrisii]
Length = 949
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|426216550|ref|XP_004002524.1| PREDICTED: semaphorin-6C isoform 2 [Ovis aries]
Length = 964
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGEHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|187607673|ref|NP_001120152.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D precursor [Xenopus (Silurana)
tropicalis]
gi|166797015|gb|AAI59148.1| sema6d protein [Xenopus (Silurana) tropicalis]
Length = 1084
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ ++ G+++YFFFRE AVE N GKAV+SR
Sbjct: 195 DAVIYRSMGDGFALRTIKYDSKWLKEPHFLHAIEYGNYIYFFFREIAVEHNNLGKAVHSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSF+K+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDLGGSQRVLEKHWTSFVKARLNCSVPGDSFFYFDVLQ 298
>gi|284005479|ref|NP_001164766.1| semaphorin-6C precursor [Oryctolagus cuniculus]
gi|217030846|gb|ACJ74008.1| Sema domain, transmembrane domain, and cytoplasmic domain, 6C
(predicted) [Oryctolagus cuniculus]
Length = 961
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGSQPPLRSAKYDSKWLREPHFVHALEHGEHVYFFFREVSVEDSRLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|37360582|dbj|BAC98269.1| mKIAA1869 protein [Mus musculus]
Length = 774
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 42 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSR 101
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 102 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 145
>gi|47227608|emb|CAG09605.1| unnamed protein product [Tetraodon nigroviridis]
Length = 982
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GDF+YFFFRE A+E+ GK V+
Sbjct: 127 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDFIYFFFREIAMEYNTMGKVVFP 186
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK DRGG P +WTSFLKSRLNCS+PGD FYF+ +Q
Sbjct: 187 RVARVCKNDRGGSPRVLEKQWTSFLKSRLNCSIPGDSHFYFNILQA 232
>gi|14010605|gb|AAK52051.1|AF363973_1 semaphorin 6C [Mus musculus]
Length = 963
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 199 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSR 258
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 259 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 302
>gi|426216548|ref|XP_004002523.1| PREDICTED: semaphorin-6C isoform 1 [Ovis aries]
Length = 932
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGEHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|26342458|dbj|BAC34891.1| unnamed protein product [Mus musculus]
Length = 595
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AV N GKAVYSR
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVGHNNLGKAVYSR 254
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 VARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 298
>gi|6166501|gb|AAF04860.1|AF198084_1 semaphorin 5C [Drosophila melanogaster]
Length = 1081
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T+QY++ L+ FV S G FVYF RE+A E ++CGK +YSRVARVCK D GG
Sbjct: 210 LRTKQYNNNWLSGAQFVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGG 269
Query: 70 R-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ R+ WTSFLK+RLNCS+P ++P+YFDEIQ
Sbjct: 270 QLLRDNWTSFLKARLNCSLPVEYPYYFDEIQ 300
>gi|6755464|ref|NP_035481.1| semaphorin-6C isoform 2 precursor [Mus musculus]
gi|8134721|sp|Q9WTM3.1|SEM6C_MOUSE RecName: Full=Semaphorin-6C; AltName: Full=Semaphorin-Y; Short=Sema
Y; Flags: Precursor
gi|4521227|dbj|BAA76294.1| semaphorin Y [Mus musculus]
gi|148706834|gb|EDL38781.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Mus musculus]
gi|162319512|gb|AAI56071.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C [synthetic construct]
gi|162319644|gb|AAI57038.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C [synthetic construct]
Length = 931
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L G+ VYFFFRE +VE G+ +SR
Sbjct: 199 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSR 258
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 259 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 302
>gi|321472248|gb|EFX83219.1| hypothetical protein DAPPUDRAFT_48390 [Daphnia pulex]
Length = 421
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 5 IYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYD 64
I+R PL + ++ L+A FV+S+ FV+FFFRE AVE NCGKAVYSRVARVCK D
Sbjct: 109 IFRLPLNSTLPNNNWLDAAEFVASVEVDQFVFFFFREVAVEVSNCGKAVYSRVARVCKND 168
Query: 65 RGGPHRFR---NRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
GG + R + WT+F+K+RLNCSVP ++PFY+D IQ
Sbjct: 169 MGGGQQQRLKDSTWTTFVKARLNCSVPAEYPFYYDHIQ 206
>gi|126333778|ref|XP_001363795.1| PREDICTED: semaphorin-6A [Monodelphis domestica]
Length = 1028
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|73970497|ref|XP_858843.1| PREDICTED: semaphorin-6A isoform 2 [Canis lupus familiaris]
Length = 1030
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|300794149|ref|NP_001180138.1| semaphorin-6A precursor [Bos taurus]
gi|296485559|tpg|DAA27674.1| TPA: sema domain, transmembrane domain (TM), and cytoplasmic
domain, (semaphorin) 6A [Bos taurus]
Length = 1029
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|440908663|gb|ELR58659.1| Semaphorin-6A [Bos grunniens mutus]
Length = 1034
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|426229325|ref|XP_004008741.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6A [Ovis aries]
Length = 1029
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|410922687|ref|XP_003974814.1| PREDICTED: semaphorin-6A-like [Takifugu rubripes]
Length = 1043
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GDF+YFF+RE A+E+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVNYGDFIYFFYREIAMEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK DRGG P +WTSFLKSRLNCS+PGD FYF+ +Q
Sbjct: 253 RVARVCKNDRGGSPRVLEKQWTSFLKSRLNCSIPGDSHFYFNILQA 298
>gi|149064211|gb|EDM14414.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1031
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|380788371|gb|AFE66061.1| semaphorin-6A precursor [Macaca mulatta]
Length = 1030
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|348575101|ref|XP_003473328.1| PREDICTED: semaphorin-6A-like [Cavia porcellus]
Length = 1030
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|402872314|ref|XP_003900066.1| PREDICTED: semaphorin-6A isoform 1 [Papio anubis]
gi|402872316|ref|XP_003900067.1| PREDICTED: semaphorin-6A isoform 2 [Papio anubis]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|355750119|gb|EHH54457.1| hypothetical protein EGM_15305 [Macaca fascicularis]
Length = 1052
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|311249995|ref|XP_003123902.1| PREDICTED: semaphorin-6A isoform 1 [Sus scrofa]
gi|335283359|ref|XP_003354294.1| PREDICTED: semaphorin-6A isoform 2 [Sus scrofa]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|297294887|ref|XP_002804530.1| PREDICTED: semaphorin-6A-like [Macaca mulatta]
Length = 971
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|189054769|dbj|BAG37591.1| unnamed protein product [Homo sapiens]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|426349706|ref|XP_004042431.1| PREDICTED: semaphorin-6A isoform 1 [Gorilla gorilla gorilla]
gi|426349708|ref|XP_004042432.1| PREDICTED: semaphorin-6A isoform 2 [Gorilla gorilla gorilla]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|11991660|ref|NP_065847.1| semaphorin-6A precursor [Homo sapiens]
gi|11093651|gb|AAG29378.1|AF279656_1 semaphorin SEMA6A1 [Homo sapiens]
gi|119569323|gb|EAW48938.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_e [Homo sapiens]
gi|162317994|gb|AAI56174.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A [synthetic construct]
gi|225000208|gb|AAI72468.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A [synthetic construct]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|410947977|ref|XP_003980718.1| PREDICTED: semaphorin-6A [Felis catus]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|403256074|ref|XP_003920724.1| PREDICTED: semaphorin-6A isoform 1 [Saimiri boliviensis
boliviensis]
gi|403256076|ref|XP_003920725.1| PREDICTED: semaphorin-6A isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|355691534|gb|EHH26719.1| hypothetical protein EGK_16770 [Macaca mulatta]
Length = 1052
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|332221523|ref|XP_003259911.1| PREDICTED: semaphorin-6A isoform 1 [Nomascus leucogenys]
gi|332221525|ref|XP_003259912.1| PREDICTED: semaphorin-6A isoform 2 [Nomascus leucogenys]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|125826377|ref|XP_684379.2| PREDICTED: semaphorin-5B [Danio rerio]
Length = 1185
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+IYR PL+T QY+S LN P+F+S+ G F +FF RE AVE +CGK VYSR
Sbjct: 297 DPVIYRSLGGMPPLRTAQYNSKWLNEPHFISAYDVGLFTFFFLRENAVEH-DCGKTVYSR 355
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F K+RLNCS G+ PFY++E+Q
Sbjct: 356 VARVCKNDIGGRFLLEDTWTTFTKARLNCSRSGEIPFYYNELQ 398
>gi|397512878|ref|XP_003826763.1| PREDICTED: semaphorin-6A isoform 1 [Pan paniscus]
gi|397512880|ref|XP_003826764.1| PREDICTED: semaphorin-6A isoform 2 [Pan paniscus]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|432114323|gb|ELK36251.1| Semaphorin-6C [Myotis davidii]
Length = 639
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDTRLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQV 100
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDAAFYFDVLQA 302
>gi|119569320|gb|EAW48935.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_b [Homo sapiens]
Length = 971
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|114601256|ref|XP_001151109.1| PREDICTED: semaphorin-6A isoform 8 [Pan troglodytes]
gi|114601258|ref|XP_001151177.1| PREDICTED: semaphorin-6A isoform 9 [Pan troglodytes]
Length = 1030
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|432114662|gb|ELK36501.1| Semaphorin-6A [Myotis davidii]
Length = 1008
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 172 IDAVIYRSFGDRPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 231
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 232 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 276
>gi|7243117|dbj|BAA92606.1| KIAA1368 protein [Homo sapiens]
Length = 1049
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 195 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 254
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 255 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 299
>gi|119569322|gb|EAW48937.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_d [Homo sapiens]
gi|168269834|dbj|BAG10044.1| semaphorin-6A precursor [synthetic construct]
Length = 1047
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|207667290|gb|ACI25102.1| semaphorin 5b, partial [Danio rerio]
Length = 245
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP+IYR PL+T QY+S LN P+F+S+ G F +FF RE AVE +CGK YSR
Sbjct: 94 DPVIYRSLGGMPPLRTAQYNSKWLNEPHFISAYDVGLFTFFFLRENAVEH-DCGKTAYSR 152
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F K+RLNCS G+ PFY++E+Q
Sbjct: 153 VARVCKNDIGGRFLLEDTWTAFTKARLNCSRSGEIPFYYNELQ 195
>gi|351706619|gb|EHB09538.1| Semaphorin-6A [Heterocephalus glaber]
Length = 1046
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/105 (51%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK ++
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVIFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|11093909|gb|AAG29494.1|AF288666_1 axon guidance signal SEMA6A1 [Mus musculus]
Length = 1005
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYREP-----LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR P L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSPGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|324503384|gb|ADY41474.1| Semaphorin-1A [Ascaris suum]
Length = 715
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 2 DPIIYR------EPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
DP+IYR + L+T++ D L++PNFV+S G VYF++RE A E + + VY+
Sbjct: 196 DPLIYRKRLSDDDGLRTQRDDLKVLDSPNFVASFAYGAHVYFWYREWAAEATDGDRQVYA 255
Query: 56 RVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK DRGG +RWTSF+K+RLNCS PG PFYF+E+Q
Sbjct: 256 RVARVCKGDRGGARPAHDRWTSFVKARLNCSYPGKTPFYFNELQA 300
>gi|410968394|ref|XP_003990692.1| PREDICTED: semaphorin-6C [Felis catus]
Length = 758
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 196 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 255
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQV 100
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 256 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQA 300
>gi|92058719|gb|AAI14624.1| SEMA6C protein [Homo sapiens]
Length = 537
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQV 100
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQA 302
>gi|351694432|gb|EHA97350.1| Semaphorin-6C [Heterocephalus glaber]
Length = 991
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 6/104 (5%)
Query: 2 DPIIYREP-----LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP++YR L+T ++DS L P+FV +L GD +YFFFRE +VE G+ +SR
Sbjct: 197 DPVVYRSLGPLPLLRTAKHDSKWLREPHFVHALEHGDHIYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSSRALDGQWTSFLKLRLNCSVPGDPTFYFDVLQ 300
>gi|89365929|gb|AAI14522.1| SEMA6C protein [Homo sapiens]
Length = 474
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQV 100
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQA 302
>gi|28279199|gb|AAH45964.1| Sema6d protein [Danio rerio]
Length = 366
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 71/106 (66%), Gaps = 8/106 (7%)
Query: 2 DPIIYRE-------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVY 54
D +IYR L+T +YDS L P+F+ ++ G++VYFFF E AVE GK VY
Sbjct: 189 DAVIYRSLGGEGRPVLRTVKYDSKWLREPHFLHAVEYGNYVYFFFSEIAVEHTAAGKVVY 248
Query: 55 SRVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
SRVARVCK D GG R +R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 249 SRVARVCKNDNGGSTRVLDRHWTSFLKARLNCSVPGDTFFYFDVLQ 294
>gi|194380956|dbj|BAG64046.1| unnamed protein product [Homo sapiens]
Length = 683
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQV 100
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQA 302
>gi|393907308|gb|EJD74593.1| sema domain-containing protein [Loa loa]
Length = 632
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 2 DPIIYR------EPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
DP+IYR E L+T++ D L++PNFV+S GD VYF++RE A E + + +Y+
Sbjct: 114 DPLIYRKRLSDDEGLRTQRDDLKVLDSPNFVASFVYGDHVYFWYREWAAETSDNDRQIYA 173
Query: 56 RVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG RWTS++K+RLNCS+P + PFYF+E+Q
Sbjct: 174 RVARVCKSDHGGARPAHERWTSYVKARLNCSIPANTPFYFNELQA 218
>gi|70912378|ref|NP_998164.2| semaphorin-6C precursor [Danio rerio]
gi|68534777|gb|AAH98887.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Danio rerio]
Length = 880
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 71/106 (66%), Gaps = 8/106 (7%)
Query: 2 DPIIYRE-------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVY 54
D +IYR L+T +YDS L P+F+ ++ G++VYFFF E AVE GK VY
Sbjct: 189 DAVIYRSLGGEGRPVLRTVKYDSKWLREPHFLHAVEYGNYVYFFFSEIAVEHTAAGKVVY 248
Query: 55 SRVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
SRVARVCK D GG R +R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 249 SRVARVCKNDNGGSTRVLDRHWTSFLKARLNCSVPGDTFFYFDVLQ 294
>gi|170595713|ref|XP_001902491.1| Sema domain containing protein [Brugia malayi]
gi|158589811|gb|EDP28661.1| Sema domain containing protein [Brugia malayi]
Length = 628
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 73/105 (69%), Gaps = 6/105 (5%)
Query: 2 DPIIYR------EPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
DP+IYR E L+T++ D L++PNFV+S G+ VYF++RE A E + + +Y+
Sbjct: 105 DPLIYRKRLSDDEGLRTQRDDLKVLDSPNFVASFVYGNHVYFWYREWAAEVSDGDRQIYA 164
Query: 56 RVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVC+ DRGG RWTS++K+RLNCSVP + PFYF+E+Q
Sbjct: 165 RVARVCRSDRGGARPAHERWTSYVKARLNCSVPANTPFYFNELQA 209
>gi|431907974|gb|ELK11581.1| Semaphorin-6A [Pteropus alecto]
Length = 1030
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ G+++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|344238723|gb|EGV94826.1| Semaphorin-6C [Cricetulus griseus]
Length = 331
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 197 DAVVYRSLGPQPPLRSAKYDSKWLREPTFVYALEHGDHVYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQV 100
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQA 301
>gi|355692694|gb|EHH27297.1| hypothetical protein EGK_17466 [Macaca mulatta]
gi|355754327|gb|EHH58292.1| hypothetical protein EGM_08108 [Macaca fascicularis]
Length = 1075
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 72/106 (67%), Gaps = 8/106 (7%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGK--AVY 54
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GK AVY
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKASAVY 254
Query: 55 SRVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
SRVAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 SRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 300
>gi|444707113|gb|ELW48415.1| Semaphorin-6A [Tupaia chinensis]
Length = 1096
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/105 (51%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ G ++YFFFRE AVE+ GK V+
Sbjct: 220 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGSYIYFFFREIAVEYNTMGKVVFP 279
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 280 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 324
>gi|301759291|ref|XP_002915496.1| PREDICTED: semaphorin-6A-like [Ailuropoda melanoleuca]
Length = 1030
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/105 (51%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK +
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVFFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|281341896|gb|EFB17480.1| hypothetical protein PANDA_003489 [Ailuropoda melanoleuca]
Length = 1047
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/105 (51%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK +
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVFFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|345782784|ref|XP_540309.3| PREDICTED: semaphorin-6C [Canis lupus familiaris]
Length = 963
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/104 (54%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR L++ +YDS L P FV +L GD VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSLGPQPALRSAKYDSKWLREPYFVHALEHGDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 301
>gi|441665030|ref|XP_004091790.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Nomascus leucogenys]
Length = 1209
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP YR PL+T QY+S L PNFV++ G F YFF RE AVE +CG+ VYSR
Sbjct: 313 DPAFYRILGSGPPLRTAQYNSEWLIEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSR 371
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVCK D GG + WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 372 VARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 414
>gi|432910788|ref|XP_004078525.1| PREDICTED: semaphorin-6D-like [Oryzias latipes]
Length = 1153
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 71/105 (67%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFFF E AVE+ GK V+S
Sbjct: 272 DAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGNYVYFFFSEIAVEYTTLGKVVFS 331
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 332 RVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQ 376
>gi|269785007|ref|NP_001161655.1| semaphorin II-like protein precursor [Saccoglossus kowalevskii]
gi|268054317|gb|ACY92645.1| semaphorin II-like protein [Saccoglossus kowalevskii]
Length = 727
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 5 IYREPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYD 64
+ + L+TE DS LN P+F+SS G V+FF RE A+E+ N GK VYSRVA+VCK D
Sbjct: 189 LLQTDLKTEDSDSRWLNEPDFISSFDIGQEVFFFLREIAMEYSNYGKIVYSRVAKVCKKD 248
Query: 65 RGGP-HRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+GG H N WT+FLK+R+ CS PG+FPFYF+ IQ
Sbjct: 249 QGGSDHVLENIWTTFLKARIICSFPGEFPFYFNNIQ 284
>gi|348525681|ref|XP_003450350.1| PREDICTED: semaphorin-6D [Oreochromis niloticus]
Length = 1089
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 71/105 (67%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFFF E AVE+ GK V+S
Sbjct: 204 DAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGNYVYFFFSEIAVEYTTLGKVVFS 263
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 264 RVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQ 308
>gi|431896630|gb|ELK06042.1| Semaphorin-6C [Pteropus alecto]
Length = 675
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+F+ + GD VYFFFRE +VE G+ +SR
Sbjct: 197 DAVVYRSLGSQPPLRSAKYDSKWLREPHFIHAFEHGDHVYFFFREVSVEDARLGRVQFSR 256
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQV 100
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 257 VARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSAFYFDVLQA 301
>gi|348541539|ref|XP_003458244.1| PREDICTED: semaphorin-6D-like [Oreochromis niloticus]
Length = 1047
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ + G++VYFF+RE AVE N GK VYSR
Sbjct: 201 DSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYFFYREIAVEHSNLGKVVYSR 260
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSF+K+RLNCSVPG+ FYFD +Q
Sbjct: 261 VARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQ 304
>gi|2623162|gb|AAB86408.1| semaphorin VIa [Mus musculus]
Length = 888
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|344243083|gb|EGV99186.1| Semaphorin-6A [Cricetulus griseus]
Length = 503
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 164 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 223
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 224 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 269
>gi|14042854|dbj|BAB55418.1| unnamed protein product [Homo sapiens]
Length = 418
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 132 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 191
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 192 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 237
>gi|345308242|ref|XP_001513097.2| PREDICTED: semaphorin-6A [Ornithorhynchus anatinus]
Length = 982
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|301604253|ref|XP_002931763.1| PREDICTED: semaphorin-6A-like [Xenopus (Silurana) tropicalis]
Length = 1025
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T +YDS L P FV ++ GD +YFF+RE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDGPTLRTVKYDSKWLKEPYFVHAVDYGDLIYFFYREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|296452903|sp|Q9H2E6.2|SEM6A_HUMAN RecName: Full=Semaphorin-6A; AltName: Full=Semaphorin VIA;
Short=Sema VIA; AltName: Full=Semaphorin-6A-1;
Short=SEMA6A-1; Flags: Precursor
Length = 1030
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|390459752|ref|XP_002744722.2| PREDICTED: semaphorin-6A [Callithrix jacchus]
Length = 674
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|327291087|ref|XP_003230253.1| PREDICTED: semaphorin-6D-like, partial [Anolis carolinensis]
Length = 446
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 69/106 (65%), Gaps = 7/106 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+FV +L GD+VY FFRE ++E+ G+ V+S
Sbjct: 118 DAVIYRSLGERSPVLRTVKYDSKWLREPHFVHALEYGDYVYLFFREISMEYTTLGRVVFS 177
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RV RVCK D GG P WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 178 RVGRVCKNDMGGSPRVLEKYWTSFLKARLNCSVPGDSFFYFDVLQA 223
>gi|119569319|gb|EAW48934.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_a [Homo sapiens]
Length = 975
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|47213712|emb|CAF95143.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1007
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 71/105 (67%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFFF E AVE+ GK V+S
Sbjct: 174 DAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIDYGNYVYFFFSEIAVEYTALGKVVFS 233
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 234 RVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQ 278
>gi|67846119|ref|NP_061214.2| semaphorin-6A precursor [Mus musculus]
gi|56405301|sp|O35464.2|SEM6A_MOUSE RecName: Full=Semaphorin-6A; AltName: Full=Semaphorin Q; Short=Sema
Q; AltName: Full=Semaphorin VIA; Short=Sema VIA;
AltName: Full=Semaphorin-6A-1; Short=SEMA6A-1; Flags:
Precursor
gi|37748387|gb|AAH59238.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A [Mus musculus]
gi|148678009|gb|EDL09956.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_c [Mus musculus]
Length = 1031
Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|392334157|ref|XP_003753094.1| PREDICTED: semaphorin-6A [Rattus norvegicus]
gi|392354691|ref|XP_003751830.1| PREDICTED: semaphorin-6A [Rattus norvegicus]
Length = 1048
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|38566246|gb|AAH62979.1| Sema6a protein [Mus musculus]
Length = 976
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|338713629|ref|XP_001503508.3| PREDICTED: semaphorin-6A-like [Equus caballus]
Length = 718
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|410904783|ref|XP_003965871.1| PREDICTED: semaphorin-6D-like [Takifugu rubripes]
Length = 1081
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 71/105 (67%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFFF E AVE+ GK V+S
Sbjct: 204 DAVIYRSLGESNPVLRTVKYDSKWLREPHFLHAIEYGNYVYFFFSEIAVEYTALGKVVFS 263
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 264 RVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQ 308
>gi|395831729|ref|XP_003788945.1| PREDICTED: semaphorin-6A [Otolemur garnettii]
Length = 1029
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|148678007|gb|EDL09954.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_a [Mus musculus]
Length = 1005
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|327276651|ref|XP_003223081.1| PREDICTED: semaphorin-6A-like [Anolis carolinensis]
Length = 1026
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ G+++YFFFRE AVE+ + GK ++
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVHAVDYGNYIYFFFREIAVEYHSMGKVIFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVARVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|26349885|dbj|BAC38582.1| unnamed protein product [Mus musculus]
Length = 587
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|326668395|ref|XP_001340298.4| PREDICTED: semaphorin-5B-like [Danio rerio]
Length = 1228
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 6/103 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DPIIYR PL+T QY+S LN P+F+S+ F Y F RE AVE +CGK V+SR
Sbjct: 337 DPIIYRSLGNMPPLRTAQYNSKWLNDPHFISAYEVSRFTYVFLRENAVE-QDCGKTVFSR 395
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VARVC+ D GG + WT+F+K+RLNCS GD PFY+ E+Q
Sbjct: 396 VARVCQNDIGGRFLLEDTWTTFMKARLNCSRSGDVPFYYHELQ 438
>gi|308388139|pdb|3OKW|A Chain A, Mouse Semaphorin 6a, Extracellular Domains 1-2
gi|308388140|pdb|3OKW|B Chain B, Mouse Semaphorin 6a, Extracellular Domains 1-2
gi|308388142|pdb|3OKY|B Chain B, Plexin A2 In Complex With Semaphorin 6a
Length = 565
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 178 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 237
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 238 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 283
>gi|26335301|dbj|BAC31351.1| unnamed protein product [Mus musculus]
Length = 605
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|207667298|gb|ACI25106.1| semaphorin 6db, partial [Danio rerio]
Length = 714
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFF E AVE+ GK V+S
Sbjct: 139 DAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGNYVYFFLSEIAVEYTTLGKVVFS 198
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 199 RVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQ 243
>gi|308198443|pdb|3AFC|A Chain A, Mouse Semaphorin 6a Extracellular Domain
gi|308198444|pdb|3AFC|B Chain B, Mouse Semaphorin 6a Extracellular Domain
gi|308198475|pdb|3AL8|A Chain A, Plexin A2 SEMAPHORIN 6A COMPLEX
Length = 556
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 179 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 238
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 239 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 284
>gi|432882289|ref|XP_004073961.1| PREDICTED: semaphorin-6D-like [Oryzias latipes]
Length = 1132
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 71/105 (67%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFF E AVE+ GK V+S
Sbjct: 180 DAVIYRSLGDDRPVLRTVKYDSKWLREPHFLHAIDYGNYVYFFLSEIAVEYTALGKMVFS 239
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R +R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 240 RVARVCKNDNGGSPRVLDRYWTSFLKARLNCSVPGDSFFYFDVLQ 284
>gi|339254230|ref|XP_003372338.1| mucolipin-1 [Trichinella spiralis]
gi|316967269|gb|EFV51717.1| mucolipin-1 [Trichinella spiralis]
Length = 680
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 70/106 (66%), Gaps = 9/106 (8%)
Query: 1 MDPIIYREP--------LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+DP+IY+ L+T ++D LN P+FV+S D+VYF+FRE E CGKA
Sbjct: 99 LDPLIYKRDMTKEEDLGLRTNRHDKKILNEPSFVASFKIEDYVYFWFREATYEQRGCGKA 158
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEI 98
VY+RV RVC +D G R ++ WTSF+K+ LNCS PG+FP YFDE+
Sbjct: 159 VYARVGRVCSHDHGHARR-KDTWTSFVKAPLNCSAPGEFPHYFDEL 203
>gi|313661380|ref|NP_001186294.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6E precursor [Danio rerio]
gi|312839808|dbj|BAJ34941.1| semaphorin 6E [Danio rerio]
Length = 1064
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFF E AVE+ GK V+S
Sbjct: 203 DAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGNYVYFFLSEIAVEYTTLGKVVFS 262
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 263 RVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQ 307
>gi|410911406|ref|XP_003969181.1| PREDICTED: semaphorin-6D-like [Takifugu rubripes]
Length = 1008
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 71/105 (67%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFF E AVE+ GK V+S
Sbjct: 202 DAVIYRSLGDGRPVLRTVKYDSKWLREPHFLHAIDYGNYVYFFLSEMAVEYTALGKVVFS 261
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R +R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 262 RVARVCKNDNGGSPRVLDRYWTSFLKARLNCSVPGDSFFYFDVLQ 306
>gi|351708815|gb|EHB11734.1| Semaphorin-6D [Heterocephalus glaber]
Length = 1079
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 12/110 (10%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGK----- 51
D +IYR L+T +YDS + P+F+ + G++VYFFFRE AVE N GK
Sbjct: 195 DHVIYRSMGDGSALRTIRYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAKSIL 254
Query: 52 -AVYSRVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
AVYSRVAR+CK D GG R ++ WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 QAVYSRVARICKNDMGGSQRVLDKHWTSFLKARLNCSVPGDSFFYFDVLQ 304
>gi|348539610|ref|XP_003457282.1| PREDICTED: semaphorin-6D-like [Oreochromis niloticus]
Length = 598
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFF E AVE+ GK V+S
Sbjct: 204 DAVIYRSLGEGRPVLRTVKYDSKWLREPHFLHAIDYGNYVYFFLSEIAVEYTTLGKVVFS 263
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 264 RVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQ 308
>gi|363744772|ref|XP_003643120.1| PREDICTED: semaphorin-6A isoform 1 [Gallus gallus]
Length = 1044
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ G+++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|118104558|ref|XP_424960.2| PREDICTED: semaphorin-6A isoform 2 [Gallus gallus]
Length = 1027
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ G+++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|449280199|gb|EMC87549.1| Semaphorin-6A [Columba livia]
Length = 1044
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ G+++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQA 298
>gi|449514948|ref|XP_004174294.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6A [Taeniopygia guttata]
Length = 1027
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ G+++YFFFRE AVE+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQ 297
>gi|431896028|gb|ELK05446.1| Semaphorin-6D [Pteropus alecto]
Length = 1079
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 18/116 (15%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGK----- 51
D +IYR L+T +YDS + P+F+ ++ G++VYFFFRE AVE N GK
Sbjct: 195 DAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKANLGL 254
Query: 52 -------AVYSRVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
AVYSRVAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 255 FRAKYREAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 310
>gi|41053391|ref|NP_956286.1| semaphorin-6A precursor [Danio rerio]
gi|38197291|gb|AAH61707.1| Zgc:66106 [Danio rerio]
Length = 968
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ DF+YFFFRE A+E+ + GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYEDFIYFFFREIAMEYNSMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG R +WTSFLK+RLNCS+PGD FYF+ +Q
Sbjct: 253 RVARVCKSDSGGSQRVLEKQWTSFLKTRLNCSIPGDSHFYFNILQA 298
>gi|432851299|ref|XP_004066954.1| PREDICTED: semaphorin-6D-like [Oryzias latipes]
Length = 1047
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 69/104 (66%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ + G++VYFF+RE AVE N GK VYSR
Sbjct: 200 DSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYFFYREIAVEHSNLGKVVYSR 259
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSF+K+R NCSVPG+ FYFD +Q
Sbjct: 260 VARICKNDVGGSQRVLEKHWTSFVKARFNCSVPGESFFYFDVLQ 303
>gi|344264903|ref|XP_003404529.1| PREDICTED: semaphorin-6A [Loxodonta africana]
Length = 1030
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 70/106 (66%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS L P FV ++ GD++YFFFRE AVE+ GK V+
Sbjct: 193 IDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFP 252
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVA+VCK D GG R +WTSFLK+RLNCSVPGD FYF+ +
Sbjct: 253 RVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILHA 298
>gi|410912822|ref|XP_003969888.1| PREDICTED: semaphorin-6D-like [Takifugu rubripes]
Length = 1047
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ + G++VYFF+RE AVE + GK VYSR
Sbjct: 199 DSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYFFYREIAVEQSSLGKVVYSR 258
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSF+K+RLNCSVPG+ FYFD +Q
Sbjct: 259 VARICKNDVGGSQRVLEKHWTSFMKARLNCSVPGESFFYFDVLQ 302
>gi|395536003|ref|XP_003770010.1| PREDICTED: semaphorin-6C [Sarcophilus harrisii]
Length = 701
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV ++ D VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSFGPQPPLRSAKYDSKWLREPHFVHAVEHRDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQV 100
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDVGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDALQA 302
>gi|341882443|gb|EGT38378.1| hypothetical protein CAEBREN_28508 [Caenorhabditis brenneri]
Length = 715
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/113 (47%), Positives = 72/113 (63%), Gaps = 15/113 (13%)
Query: 2 DPIIYREPL------------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFI-- 47
D +IYR+ + +T+ YD+ LNAPNFVS+ + VYF+FRE A E I
Sbjct: 192 DALIYRKTIDETPATAKSANIRTQSYDARVLNAPNFVSTFAYKEHVYFWFREIASEAIDN 251
Query: 48 NCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP-GDFPFYFDEIQ 99
N +Y+RVARVCK D+GG RWTS+LK+RLNCS+P G PFYF+E++
Sbjct: 252 NEESQIYARVARVCKNDKGGARPANERWTSYLKARLNCSLPSGSSPFYFNELK 304
>gi|301615711|ref|XP_002937315.1| PREDICTED: semaphorin-6D-like [Xenopus (Silurana) tropicalis]
Length = 963
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 7/105 (6%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFFFRE ++E+ GK +S
Sbjct: 193 DAVIYRSLGEKSPVLRTVKYDSKWLREPHFIHAVEYGNYVYFFFREISMEYTTIGKVTFS 252
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RV RVCK D GG P WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 253 RVGRVCKNDMGGSPRVLEKYWTSFLKARLNCSVPGDSFFYFDVLQ 297
>gi|47230648|emb|CAF99841.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1016
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +IYR L+T +YDS L P+F+ + G++VYFF+RE AVE + GK VYSR
Sbjct: 199 DSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYFFYREIAVEQSSLGKVVYSR 258
Query: 57 VARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VAR+CK D GG R WTSF+K+RLNCSVPG+ FYFD +Q
Sbjct: 259 VARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQ 302
>gi|341901579|gb|EGT57514.1| CBN-SMP-1 protein [Caenorhabditis brenneri]
Length = 715
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 53/113 (46%), Positives = 73/113 (64%), Gaps = 15/113 (13%)
Query: 2 DPIIYREPL------------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINC 49
D +IYR+ + +T+ YD+ LNAPNFVS+ + VYF+FRE A E I+
Sbjct: 192 DALIYRKTIDETPATAKSANIRTQSYDARVLNAPNFVSTFAYKEHVYFWFREIASEAIDN 251
Query: 50 GK--AVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP-GDFPFYFDEIQ 99
+ +Y+RVARVCK D+GG RWTS+LK+RLNCS+P G PFYF+E++
Sbjct: 252 NEEPQIYARVARVCKNDKGGARPANERWTSYLKARLNCSLPSGSSPFYFNELK 304
>gi|126313713|ref|XP_001366206.1| PREDICTED: semaphorin-6C [Monodelphis domestica]
Length = 941
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D ++YR PL++ +YDS L P+FV ++ D VYFFFRE +VE G+ +SR
Sbjct: 198 DAVVYRSFGPQPPLRSAKYDSKWLREPHFVHAVEHRDHVYFFFREVSVEDARLGRVQFSR 257
Query: 57 VARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQV 100
VARVCK D GG R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 258 VARVCKRDIGGSPRALDRHWTSFLKLRLNCSVPGDSAFYFDVLQA 302
>gi|268569918|ref|XP_002640648.1| C. briggsae CBR-SMP-1 protein [Caenorhabditis briggsae]
Length = 712
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 15/113 (13%)
Query: 2 DPIIYREPL------------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFI-- 47
D +IYR+ + +T+ YD+ LNAPNFV++ + VYF+FRE A E I
Sbjct: 188 DALIYRKTIDETPATKASANIRTQSYDARVLNAPNFVATFAYKEHVYFWFREIASEAIDN 247
Query: 48 NCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP-GDFPFYFDEIQ 99
N +Y+RVARVCK D+GG RWTS+LK+RLNCS+P G PFYF+E++
Sbjct: 248 NEESQIYARVARVCKNDKGGARPANERWTSYLKARLNCSLPSGSSPFYFNELK 300
>gi|47222015|emb|CAG08270.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1290
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 17/114 (14%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNA-----------PNFVSSLTQGDFVYFFFRETAVE 45
DP+IYR PL+T QY+S LN P+F+S+ G F +FF RE AVE
Sbjct: 308 DPVIYRSLGGMPPLRTAQYNSKWLNGRAQQHRHSGPEPHFISAYDIGLFTFFFLRENAVE 367
Query: 46 FINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+CGK VYSRVARVCK D GG + WT+F+K+RLNCS G+ PFY++E+Q
Sbjct: 368 H-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKARLNCSRSGEIPFYYNELQ 420
>gi|308485698|ref|XP_003105047.1| CRE-SMP-1 protein [Caenorhabditis remanei]
gi|308256992|gb|EFP00945.1| CRE-SMP-1 protein [Caenorhabditis remanei]
Length = 711
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 72/112 (64%), Gaps = 14/112 (12%)
Query: 2 DPIIYREPL-----------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFI--N 48
D +IYR+ + +T+ YD+ LNAPNFV++ + VYF+FRE A E I N
Sbjct: 188 DALIYRKTIDETASTKSANIRTQSYDARVLNAPNFVATFVYKEHVYFWFREIASEAIDNN 247
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP-GDFPFYFDEIQ 99
+Y+RVARVCK D+GG RWT++LK+RLNCS+P G PFYF+E++
Sbjct: 248 EESQIYARVARVCKNDKGGARPANERWTTYLKARLNCSLPSGSSPFYFNELK 299
>gi|149028217|gb|EDL83655.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [Rattus norvegicus]
Length = 931
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 247 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 306
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 307 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQ 351
>gi|16758220|ref|NP_445923.1| semaphorin-6B precursor [Rattus norvegicus]
gi|8134705|sp|O70141.1|SEM6B_RAT RecName: Full=Semaphorin-6B; AltName: Full=Semaphorin-Z; Short=Sema
Z; Flags: Precursor
gi|3062808|dbj|BAA25687.1| semaphorin Z [Rattus norvegicus]
Length = 887
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 203 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 262
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 263 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQ 307
>gi|295849301|ref|NP_001171533.1| semaphorin-6C isoform 3 precursor [Homo sapiens]
Length = 922
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q + P+FV +L GD VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 168 RCPFDATQSNVAIFAEPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 227
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 228 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 261
>gi|18462032|gb|AAL72099.1|AF339153_1 semaphorin Y short isoform 2 [Homo sapiens]
Length = 922
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q + P+FV +L GD VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 168 RCPFDATQSNVAIFAEPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 227
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 228 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 261
>gi|119573856|gb|EAW53471.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Homo sapiens]
Length = 922
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q + P+FV +L GD VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 168 RCPFDATQSNVAIFAEPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 227
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 228 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 261
>gi|332263145|ref|XP_003280614.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Nomascus leucogenys]
Length = 877
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDXHFYFNVLQ 306
>gi|74141579|dbj|BAE38558.1| unnamed protein product [Mus musculus]
Length = 886
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 203 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 262
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 263 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQ 307
>gi|7305475|ref|NP_038690.1| semaphorin-6B precursor [Mus musculus]
gi|194394223|ref|NP_001123928.1| semaphorin-6B precursor [Mus musculus]
gi|8134709|sp|O54951.1|SEM6B_MOUSE RecName: Full=Semaphorin-6B; AltName: Full=Semaphorin VIB;
Short=Sema VIB; AltName: Full=Semaphorin-N; Short=Sema
N; Flags: Precursor
gi|2687423|gb|AAC00493.1| semaphorin VIb [Mus musculus]
gi|74228190|dbj|BAE23975.1| unnamed protein product [Mus musculus]
gi|223460048|gb|AAI39416.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [Mus musculus]
Length = 886
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 203 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 262
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 263 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQ 307
>gi|332810241|ref|XP_001170512.2| PREDICTED: semaphorin-6C isoform 4 [Pan troglodytes]
Length = 922
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q + P+FV +L GD VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 168 RCPFDATQSNVAIFAEPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 227
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 228 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 261
>gi|297663680|ref|XP_002810297.1| PREDICTED: semaphorin-6C isoform 2 [Pongo abelii]
Length = 924
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q + P+FV +L GD VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 168 RCPFDATQSNVAVFAEPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 227
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 228 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 261
>gi|355691209|gb|EHH26394.1| Semaphorin-F [Macaca mulatta]
Length = 997
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 12 TEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRF 71
T + + N PNFVSS G+F YFFFRE AVE +CGK V+SR ARVCK D GG
Sbjct: 132 TNAFTPVCTNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLL 190
Query: 72 RNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 191 EDTWTTFMKARLNCSRPGEVPFYYNELQ 218
>gi|19718780|ref|NP_115484.2| semaphorin-6B precursor [Homo sapiens]
gi|116242786|sp|Q9H3T3.4|SEM6B_HUMAN RecName: Full=Semaphorin-6B; AltName: Full=Semaphorin-Z; Short=Sema
Z; Flags: Precursor
gi|37182996|gb|AAQ89298.1| semaphorin Z [Homo sapiens]
gi|119589614|gb|EAW69208.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_c [Homo sapiens]
gi|148745340|gb|AAI42618.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [Homo sapiens]
gi|208965490|dbj|BAG72759.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [synthetic construct]
Length = 888
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQ 306
>gi|410329705|gb|JAA33799.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [Pan troglodytes]
Length = 888
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQ 306
>gi|311254344|ref|XP_003125817.1| PREDICTED: semaphorin-6C isoform 3 [Sus scrofa]
Length = 926
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q + P+FV +L GD VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 168 RCPFDATQSNVAVFAEPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 227
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 228 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 261
>gi|12081907|dbj|BAB20669.1| semaphorin Z [Homo sapiens]
Length = 888
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQ 306
>gi|344275450|ref|XP_003409525.1| PREDICTED: semaphorin-6C isoform 3 [Loxodonta africana]
Length = 927
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q + P+FV +L GD VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 168 RCPFDATQSNVAVFAEPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 227
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 228 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 261
>gi|426385157|ref|XP_004059096.1| PREDICTED: semaphorin-5A [Gorilla gorilla gorilla]
Length = 990
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 9 PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGP 68
P +E +S PNFVSS G+F YFFFRE AVE +CGK V+SR ARVCK D GG
Sbjct: 146 PAVSEILARISYGEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGR 204
Query: 69 HRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ WT+F+K+RLNCS PG+ PFY++E+Q
Sbjct: 205 FLLEDTWTTFMKARLNCSRPGEVPFYYNELQ 235
>gi|291225442|ref|XP_002732714.1| PREDICTED: semaphorin II-like protein-like [Saccoglossus
kowalevskii]
Length = 589
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGP- 68
L+T +DS LN P+F+SS G+ V FF RE A+E+ N GK VYSRVA+VCK D+GG
Sbjct: 197 LKTLDHDSRWLNDPDFISSFDIGEEVLFFLREIAMEYSNYGKVVYSRVAKVCKKDKGGSN 256
Query: 69 HRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
H N WT+FLK+R+ C+ PG FPF F+ IQ
Sbjct: 257 HVLENIWTTFLKARIICAFPGKFPFDFNNIQ 287
>gi|449282774|gb|EMC89566.1| Semaphorin-5A, partial [Columba livia]
Length = 102
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 62/90 (68%), Gaps = 6/90 (6%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
DP IYR PL+T QY+S LN PNFVSS G+F YFFFRE AVE +CGK V+SR
Sbjct: 14 DPAIYRSLGALPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSR 72
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCS 86
ARVCK D GG + WT+F+K+RLNCS
Sbjct: 73 AARVCKNDIGGKFVLEDTWTTFMKARLNCS 102
>gi|443685898|gb|ELT89363.1| hypothetical protein CAPTEDRAFT_220634 [Capitella teleta]
Length = 682
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 62/90 (68%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L+T + LN P+F++S D+VYFFFRE +VE + YSRVARVCK DRGG
Sbjct: 210 LRTIHLEKKWLNVPHFIASFDIEDYVYFFFREISVEHPYEDEVTYSRVARVCKNDRGGDT 269
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+N WT+FLK+R+NCS+PGD P YF+ IQ
Sbjct: 270 ALKNSWTTFLKARINCSLPGDNPLYFNFIQ 299
>gi|363742877|ref|XP_003642725.1| PREDICTED: semaphorin-6C-like [Gallus gallus]
gi|363742925|ref|XP_003642743.1| PREDICTED: semaphorin-6C-like [Gallus gallus]
Length = 837
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/103 (49%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 2 DPIIYRE----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRV 57
D +IYR L++ +Y S L P+FV ++ G VYFFFRE A E GK SRV
Sbjct: 196 DAVIYRSVRGPALRSIKYSSRWLREPHFVHAMPHGAHVYFFFREMAAELGLPGKVPVSRV 255
Query: 58 ARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVC+ D GG P RWTSFLK RL C+VPGD PF+FD ++
Sbjct: 256 GRVCRNDAGGSPRVLERRWTSFLKKRLQCAVPGDVPFHFDVLE 298
>gi|426216552|ref|XP_004002525.1| PREDICTED: semaphorin-6C isoform 3 [Ovis aries]
Length = 924
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 51/94 (54%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q + P+FV +L G+ VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 168 RCPFDATQSNVAVFAEPHFVHALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 227
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 228 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 261
>gi|410921374|ref|XP_003974158.1| PREDICTED: semaphorin-6B-like, partial [Takifugu rubripes]
Length = 801
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P F+S++ G +YFFFRE A+EF K V S
Sbjct: 126 IDAVIYRSLGDSPALRTVKHDSKWFREPYFISAVEWGPHIYFFFREIAMEFNYLEKVVVS 185
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK DRGG R +WTSFLK+RLNCSVPGD FYF+ +
Sbjct: 186 RVARVCKRDRGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNLLH 230
>gi|207667296|gb|ACI25105.1| semaphorin 6bb, partial [Danio rerio]
Length = 296
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FVS++ G VYFFFRE A+EF K V S
Sbjct: 78 IDAVIYRSLGDNPALRTVKHDSKWFRGPYFVSAVEWGPHVYFFFREMAMEFNYLEKVVVS 137
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D+GG R +WTSFLK+RLNCS+PGD FYF+ +
Sbjct: 138 RVARVCKADQGGSQRVLEKQWTSFLKARLNCSIPGDSHFYFNLLH 182
>gi|47228364|emb|CAG07759.1| unnamed protein product [Tetraodon nigroviridis]
Length = 778
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FVSS+ G +YFFFRE A+EF + K + S
Sbjct: 178 IDAVIYRSLGDSPALRTVKHDSKWFREPYFVSSMEWGPHIYFFFREMAMEFHHLEKVMVS 237
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG R +WT+FLK+RLNCSVPGD FYF+ +
Sbjct: 238 RVARVCKADLGGSQRVLEKQWTTFLKARLNCSVPGDSHFYFNLLHA 283
>gi|71995633|ref|NP_493582.3| Protein SMP-1, isoform a [Caenorhabditis elegans]
gi|8134675|sp|Q17330.2|SEM1A_CAEEL RecName: Full=Semaphorin-1A; AltName: Full=CeSema; Flags: Precursor
gi|3881120|emb|CAA21714.1| Protein SMP-1, isoform a [Caenorhabditis elegans]
Length = 712
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 15/114 (13%)
Query: 2 DPIIYREPL------------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINC 49
D +IYR+ + +T+ YD+ LNAPNFV++ + VYF+FRE A E I+
Sbjct: 189 DALIYRKTIDETPSSKSAANIRTQSYDARVLNAPNFVATFAYKEHVYFWFREIASEAIDN 248
Query: 50 GKA--VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP-GDFPFYFDEIQV 100
+ +Y+RVARVCK D+GG RWTS+LK+RLNCS+P G PFYF+E++
Sbjct: 249 NEEPQIYARVARVCKNDKGGARPANERWTSYLKARLNCSLPSGSSPFYFNELKA 302
>gi|410924427|ref|XP_003975683.1| PREDICTED: semaphorin-6B-like [Takifugu rubripes]
Length = 920
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FVSS+ G +YFFFRE A+EF + K + S
Sbjct: 220 IDAVIYRSLSDSPALRTVKHDSKWFREPYFVSSMEWGPHIYFFFREMAMEFHHLEKVMVS 279
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG R +WT+FLK+RLNCSVPGD FYF+ +
Sbjct: 280 RVARVCKADLGGSQRVLEKQWTTFLKARLNCSVPGDSHFYFNLLHA 325
>gi|431922324|gb|ELK19415.1| Semaphorin-6B [Pteropus alecto]
Length = 1008
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G +YFFFRE A+EF KAV S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKAVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|326917188|ref|XP_003204883.1| PREDICTED: semaphorin-5A-like, partial [Meleagris gallopavo]
Length = 915
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 21 NAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLK 80
+ PNFVSS G+F YFFFRE AVE +CGK V+SR ARVCK D GG + WT+F+K
Sbjct: 97 HKPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGKFVLEDTWTTFMK 155
Query: 81 SRLNCSVPGDFPFYFDEIQ 99
+RLNCS PG+ PFY++E+Q
Sbjct: 156 ARLNCSRPGEIPFYYNELQ 174
>gi|19850863|gb|AAL99669.1|AF363971_1 semaphorin 6C short isoform 2 [Rattus norvegicus]
gi|149030701|gb|EDL85738.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
gi|149030702|gb|EDL85739.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
gi|149030703|gb|EDL85740.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
gi|149030704|gb|EDL85741.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
gi|149030705|gb|EDL85742.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
Length = 920
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q P+FV +L GD VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 167 RCPFDATQSTVAISAEPHFVYALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 226
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 227 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 260
>gi|312092572|ref|XP_003147385.1| hypothetical protein LOAG_11820 [Loa loa]
Length = 196
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%)
Query: 16 DSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRW 75
D + + PNFV+S GD VYF++RE A E + + +Y+RVARVCK D GG RW
Sbjct: 19 DQIDWDTPNFVASFVYGDHVYFWYREWAAETSDNDRQIYARVARVCKSDHGGARPAHERW 78
Query: 76 TSFLKSRLNCSVPGDFPFYFDEIQV 100
TS++K+RLNCS+P + PFYF+E+Q
Sbjct: 79 TSYVKARLNCSIPANTPFYFNELQA 103
>gi|47213153|emb|CAF93843.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1057
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 71/118 (60%), Gaps = 20/118 (16%)
Query: 2 DPIIYRE------PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
D +IYR L+T +YDS L P+F+ ++ G++VYFF RE AVE+ GK V+S
Sbjct: 243 DAVIYRSLGDERPVLRTVKYDSKWLREPHFLHAIDYGNYVYFFLREMAVEYTTLGKVVFS 302
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLK-------------SRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R R WTSFLK +RLNCSVPGD FYFD +Q
Sbjct: 303 RVARVCKNDNGGSPRVLERYWTSFLKARPSVGDHLVSVQARLNCSVPGDSFFYFDVLQ 360
>gi|348527784|ref|XP_003451399.1| PREDICTED: semaphorin-6B-like [Oreochromis niloticus]
Length = 849
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FVS++ G +YFFFRE A+EF K V S
Sbjct: 173 IDAVIYRSLGDSPALRTVKHDSKWFREPYFVSAVEWGPHIYFFFREIAMEFNYLEKVVVS 232
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D+GG R +WTSFLK+RLNCSVPGD FYF+ +
Sbjct: 233 RVARVCKRDQGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNLLH 277
>gi|344237600|gb|EGV93703.1| Semaphorin-6B [Cricetulus griseus]
Length = 823
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 203 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 262
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 263 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 308
>gi|292616794|ref|XP_002663156.1| PREDICTED: semaphorin-6B [Danio rerio]
Length = 921
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FVS++ G VYFFFRE A+EF K V S
Sbjct: 159 IDAVIYRSLGDNPALRTVKHDSKWFREPYFVSAVEWGPHVYFFFREMAMEFNYLEKVVVS 218
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D+GG R +WTSFLK+RLNCS+PGD FYF+ +
Sbjct: 219 RVARVCKADQGGSQRVLEKQWTSFLKARLNCSIPGDSHFYFNLLH 263
>gi|148706833|gb|EDL38780.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Mus musculus]
Length = 923
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/94 (54%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q P+FV +L G+ VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 169 RCPFDATQSTVAIFAEPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 228
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 229 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 262
>gi|170592713|ref|XP_001901109.1| Sema domain containing protein [Brugia malayi]
gi|158591176|gb|EDP29789.1| Sema domain containing protein [Brugia malayi]
Length = 656
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 11/107 (10%)
Query: 4 IIYREPL---QTEQYDSMS--------LNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL E Y SM L P+FV+S + G +VYFFFRE A+E NC +
Sbjct: 195 LIYRPPLVKNNKEVYSSMRTIYTDSKWLYEPDFVASFSIGKYVYFFFREVAIERENCERV 254
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
V+SRVAR+CK D GG + R WT+F+K+RLNCS YF+E+Q
Sbjct: 255 VFSRVARICKKDVGGKNVLRQVWTTFVKARLNCSTSSKLSIYFNELQ 301
>gi|348500940|ref|XP_003438029.1| PREDICTED: semaphorin-6B-like [Oreochromis niloticus]
Length = 893
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FVS++ G +YFFFRE A+EF + K + S
Sbjct: 192 IDAVIYRSLGDSPALRTVKHDSKWFREPYFVSAMEWGPHIYFFFREMAMEFHHLEKVMVS 251
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG R +WT+FLK+RLNCSVPGD FYF+ +
Sbjct: 252 RVARVCKSDLGGSQRVLEKQWTTFLKARLNCSVPGDSHFYFNLLHA 297
>gi|19850865|gb|AAL99670.1|AF363972_1 semaphorin 6C short isoform 2 [Mus musculus]
Length = 923
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/94 (54%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRG 66
R P Q P+FV +L G+ VYFFFRE +VE G+ +SRVARVCK D G
Sbjct: 169 RCPFDATQSTVAIFAEPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMG 228
Query: 67 GPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
G R +R WTSFLK RLNCSVPGD FYFD +Q
Sbjct: 229 GSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ 262
>gi|292611084|ref|XP_002660976.1| PREDICTED: semaphorin-6B [Danio rerio]
Length = 984
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FVS++ G +YFFFRE A+EF K + S
Sbjct: 305 IDAVIYRSLGESPALRTIKHDSKWFREPYFVSAVEWGPHIYFFFREMAMEFNYLEKVMVS 364
Query: 56 RVARVCKYDRGGPHRFRNR-WTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R R WTSFLK+RLNCS+PGD FYF+ +Q
Sbjct: 365 RVARVCKGDLGGSQRVLERQWTSFLKARLNCSIPGDSHFYFNLLQ 409
>gi|397497053|ref|XP_003846266.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Pan paniscus]
Length = 685
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|119589616|gb|EAW69210.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_e [Homo sapiens]
Length = 517
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|119589613|gb|EAW69207.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_b [Homo sapiens]
Length = 679
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|13259171|gb|AAK16831.1|AF293363_1 semaphorin 6B isoform 2 [Homo sapiens]
Length = 687
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|440905932|gb|ELR56249.1| Semaphorin-6B, partial [Bos grunniens mutus]
Length = 621
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G +YFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDMGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|119589612|gb|EAW69206.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_a [Homo sapiens]
Length = 682
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|194390172|dbj|BAG61848.1| unnamed protein product [Homo sapiens]
Length = 535
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|9454055|gb|AAF87661.1|AF216389_1 semaphorin 6B isoform 1 [Homo sapiens]
Length = 517
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|297476802|ref|XP_002688976.1| PREDICTED: semaphorin-6B [Bos taurus]
gi|296485711|tpg|DAA27826.1| TPA: semaphorin 6B-like [Bos taurus]
Length = 815
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G +YFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDMGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|355762571|gb|EHH62015.1| Semaphorin-Z, partial [Macaca fascicularis]
Length = 582
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|355703007|gb|EHH29498.1| Semaphorin-Z, partial [Macaca mulatta]
Length = 582
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|395831437|ref|XP_003788808.1| PREDICTED: semaphorin-6B [Otolemur garnettii]
Length = 889
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G+ VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGNHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|119589615|gb|EAW69209.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_d [Homo sapiens]
Length = 522
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|334353405|emb|CCA61013.1| semaphorin-6Ba [Homo sapiens]
Length = 677
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|312065915|ref|XP_003136020.1| sema domain-containing protein [Loa loa]
gi|307768806|gb|EFO28040.1| sema domain-containing protein [Loa loa]
Length = 521
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 65/107 (60%), Gaps = 11/107 (10%)
Query: 4 IIYREPL---QTEQYDSMS--------LNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL E Y SM L P+FV+S +VYFFFRE A+E NC
Sbjct: 189 LIYRPPLVKNNKEVYSSMRTIYTDSKWLYEPDFVASFNIDKYVYFFFREIAIERENCEHI 248
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
V+SRVAR+CK D GG + R WT+F+K+RLNCS FP YF+E+Q
Sbjct: 249 VFSRVARICKKDVGGKNVLRQVWTTFVKARLNCSTSSKFPVYFNELQ 295
>gi|358413023|ref|XP_003582449.1| PREDICTED: semaphorin-6B [Bos taurus]
Length = 818
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G +YFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDMGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|426230700|ref|XP_004023732.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Ovis aries]
Length = 770
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G +YFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDMGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|327290541|ref|XP_003229981.1| PREDICTED: semaphorin-6B-like, partial [Anolis carolinensis]
Length = 423
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ VYFFFRE A+EF K V S
Sbjct: 201 IDAVIYRSLGDSPTLRTVKHDSKWFKEPYFVHAVEWKSHVYFFFREIAMEFNYLEKVVVS 260
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R +WTSFLK+RLNCSVPGD FYF+ IQ
Sbjct: 261 RVARVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNVIQ 305
>gi|395512859|ref|XP_003760651.1| PREDICTED: semaphorin-6B [Sarcophilus harrisii]
Length = 747
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P F+ ++ G VYFFFRE A+EF K V S
Sbjct: 209 IDAVIYRSLGDSPTLRTVKHDSKWFKEPYFIHAVEWGSHVYFFFREIAMEFNYLEKVVVS 268
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 269 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 314
>gi|432916581|ref|XP_004079348.1| PREDICTED: semaphorin-6B-like [Oryzias latipes]
Length = 916
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FVS++ G +YFFFRE A+EF + K + S
Sbjct: 197 IDAVIYRSLGDSPALRTVKHDSKWFREPYFVSAMEWGPHIYFFFREMAMEFHHLEKVMVS 256
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WT+FLK+RLNCS+PGD FYF+ +
Sbjct: 257 RVARVCKADLGGSPRVLEKQWTTFLKARLNCSIPGDSHFYFNLLHA 302
>gi|296232581|ref|XP_002807832.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Callithrix jacchus]
Length = 801
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEGGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|410950209|ref|XP_004001683.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Felis catus]
Length = 606
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G +YFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|359322259|ref|XP_003639814.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Canis lupus
familiaris]
Length = 783
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G +YFFFRE A+EF K V S
Sbjct: 273 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVS 332
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 333 RVARVCKNDLGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 378
>gi|432116851|gb|ELK37438.1| Semaphorin-6B [Myotis davidii]
Length = 655
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G +YFFFRE A+EF K V S
Sbjct: 238 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVS 297
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 298 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVMQA 343
>gi|390363622|ref|XP_797201.3| PREDICTED: semaphorin-6B-like [Strongylocentrotus purpuratus]
Length = 676
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 10 LQTEQYDSMSLNAP-NFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGP 68
L+T+ L P NFV S+ +G+F+YFFFRE A+E+ N G+ +YSRVARVCK D GG
Sbjct: 216 LETDNNKENILKEPTNFVGSMERGEFIYFFFRERAIEYENIGQIIYSRVARVCKNDAGGT 275
Query: 69 HR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
F +T+FLK+RL CSV DFPF F+EIQ
Sbjct: 276 TNPFNGEFTTFLKTRLMCSVGADFPFIFNEIQ 307
>gi|403296256|ref|XP_003945353.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Saimiri boliviensis
boliviensis]
Length = 687
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G VYFFFRE A+EF K V S
Sbjct: 202 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVS 261
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 262 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 307
>gi|402585229|gb|EJW79169.1| sema domain-containing protein, partial [Wuchereria bancrofti]
Length = 350
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 23 PNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSR 82
PNFV+S GD VYF++RE A E + + +Y+RVARVC+ DRGG RWTS++K+R
Sbjct: 1 PNFVASFVYGDHVYFWYREWAAEVGDGDRQIYARVARVCRGDRGGARPAHERWTSYVKAR 60
Query: 83 LNCSVPGDFPFYFDEIQV 100
LNCSVP + PFYF+E+Q
Sbjct: 61 LNCSVPANTPFYFNELQA 78
>gi|268563705|ref|XP_002638911.1| C. briggsae CBR-MAB-20 protein [Caenorhabditis briggsae]
gi|74783346|sp|Q60PR7.1|SEM2A_CAEBR RecName: Full=Semaphorin-2A; Short=Sema-2a; AltName: Full=Male
abnormal protein 20; Flags: Precursor
Length = 656
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/107 (48%), Positives = 63/107 (58%), Gaps = 11/107 (10%)
Query: 4 IIYREPL-----------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL +T D+ LN P FV S G V FFFRE A + +
Sbjct: 180 LIYRPPLTKNGKQLHASIRTIYSDNKWLNEPQFVGSFDVGQHVLFFFREIAHDNSFGERI 239
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++SRVARVCK D GG + R WTSF+K+RLNCSV +FPFYFD IQ
Sbjct: 240 IHSRVARVCKKDIGGRNVLRQVWTSFVKARLNCSVSANFPFYFDHIQ 286
>gi|119936393|gb|ABM06119.1| semaphorin 6B precursor [Bos taurus]
Length = 367
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ G +YFFFRE A+EF K V S
Sbjct: 85 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVS 144
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ ++
Sbjct: 145 RVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLRA 190
>gi|355718504|gb|AES06290.1| semaphorin 6B isoform 3 precursor [Mustela putorius furo]
Length = 388
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ +YFFFRE A+EF K V S
Sbjct: 161 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWASHIYFFFREIAMEFNYLEKVVVS 220
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 221 RVARVCKNDLGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 266
>gi|308497901|ref|XP_003111137.1| CRE-MAB-20 protein [Caenorhabditis remanei]
gi|308240685|gb|EFO84637.1| CRE-MAB-20 protein [Caenorhabditis remanei]
Length = 659
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 52/107 (48%), Positives = 63/107 (58%), Gaps = 11/107 (10%)
Query: 4 IIYREPL-----------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL +T D+ LN P FV S G V FFFRE A + +
Sbjct: 184 LIYRPPLTKNGKQLHASIRTIYSDNKWLNEPQFVGSFDVGQHVLFFFREIAHDNSFGERI 243
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
V+SRVARVCK D GG + R WTSF+K+RLNCSV ++PFYFD IQ
Sbjct: 244 VHSRVARVCKKDIGGRNVLRQVWTSFVKARLNCSVSANYPFYFDHIQ 290
>gi|390359452|ref|XP_003729485.1| PREDICTED: semaphorin-6D [Strongylocentrotus purpuratus]
Length = 865
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Query: 2 DPIIYREP-----LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
D +I+R L T+ DS L P FV S GD+V FFFRE AVE+ + G AVYSR
Sbjct: 193 DSVIFRSQGPQNVLLTKAMDSKWLKIPAFVKSFDVGDWVMFFFREVAVEYTS-GDAVYSR 251
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
V +VCK D GG +WT+F K RLNCS PG FPFYF+ +Q
Sbjct: 252 VGKVCKSDEGGDWISAGQWTTFQKIRLNCSFPGAFPFYFNFLQ 294
>gi|402587203|gb|EJW81138.1| hypothetical protein WUBG_07953, partial [Wuchereria bancrofti]
Length = 294
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
Query: 2 DPIIYREPL---QTEQYDSMS--------LNAPNFVSSLTQGDFVYFFFRETAVEFINCG 50
+ +IYR PL E Y SM L P+FV+S G +VYFFFRE A+E NC
Sbjct: 186 NNLIYRPPLVKNNKEVYSSMRTIYTDSKWLYEPDFVASFNIGKYVYFFFREVAIERENCE 245
Query: 51 KAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V+SRVAR+CK D GG + R WT+F+K+RLNCS YF+E++
Sbjct: 246 RVVFSRVARICKKDVGGKNVLRQVWTTFVKARLNCSTSLKLSIYFNELR 294
>gi|561676|gb|AAA51021.1| CeSema [Caenorhabditis elegans]
Length = 562
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 17/116 (14%)
Query: 2 DPIIYREPL------------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINC 49
D +IYR+ + +T+ YD+ LNAPNFV++ + VYF+FRE A E I+
Sbjct: 190 DALIYRKTIDETPSSKSAANIRTQSYDARVLNAPNFVATFAYKEHVYFWFREIASEAIDN 249
Query: 50 GKA----VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP-GDFPFYFDEIQV 100
++ +Y+RVARVCK D+GG RWTS+LK+RLN S+P G PFYF+E++
Sbjct: 250 NRSRSFQIYARVARVCKNDKGGARPANERWTSYLKARLNYSLPSGSSPFYFNELKA 305
>gi|363743770|ref|XP_425890.3| PREDICTED: semaphorin-6B, partial [Gallus gallus]
Length = 892
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ VYFFFRE A+EF K V S
Sbjct: 190 IDAVIYRSLGDSPTLRTVKHDSKWFKEPYFVHAVEWRSHVYFFFREIAMEFNYLEKVVVS 249
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG R +WTSFLK+RLNCSVPGD FYF+ I
Sbjct: 250 RVARVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNVIHA 295
>gi|7407967|gb|AAF60253.2| semaphorin-2a [Caenorhabditis elegans]
Length = 658
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 64/107 (59%), Gaps = 11/107 (10%)
Query: 4 IIYREPL-----------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL +T D+ LN P FV S G V+FFFRE A + +
Sbjct: 184 LIYRPPLTKNGKQLHASIRTIYSDNKWLNEPQFVGSFDVGQHVFFFFREIAHDNSFGERI 243
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
V+SRVARVCK D GG + R WTSF+K+RLNCSV +FPFYFD IQ
Sbjct: 244 VHSRVARVCKKDIGGRNVLRQVWTSFVKARLNCSVSANFPFYFDHIQ 290
>gi|17508413|ref|NP_490875.1| Protein MAB-20, isoform a [Caenorhabditis elegans]
gi|75020111|sp|Q95XP4.1|SEM2A_CAEEL RecName: Full=Semaphorin-2A; Short=Sema-2a; AltName: Full=Protein
male abnormal 20; Flags: Precursor
gi|373219435|emb|CCD67974.1| Protein MAB-20, isoform a [Caenorhabditis elegans]
Length = 658
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 64/107 (59%), Gaps = 11/107 (10%)
Query: 4 IIYREPL-----------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL +T D+ LN P FV S G V+FFFRE A + +
Sbjct: 184 LIYRPPLTKNGKQLHASIRTIYSDNKWLNEPQFVGSFDVGQHVFFFFREIAHDNSFGERI 243
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
V+SRVARVCK D GG + R WTSF+K+RLNCSV +FPFYFD IQ
Sbjct: 244 VHSRVARVCKKDIGGRNVLRQVWTSFVKARLNCSVSANFPFYFDHIQ 290
>gi|197091711|gb|ACH42088.1| predicted semaphorin [Crassostrea gigas]
Length = 139
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%)
Query: 29 LTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
L D VYFFFRE AVEF K + SRVA+VCK D GG N+WT++ K+RLNCS+P
Sbjct: 14 LEVDDVVYFFFREIAVEFTGFMKKIVSRVAQVCKKDLGGSSLLVNKWTTYQKARLNCSLP 73
Query: 89 GDFPFYFDEIQ 99
G FPFYFDEIQ
Sbjct: 74 GTFPFYFDEIQ 84
>gi|348549980|ref|XP_003460811.1| PREDICTED: semaphorin-6B-like [Cavia porcellus]
Length = 1104
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ VYFFFRE A+EF K V S
Sbjct: 441 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVQWRSHVYFFFREIAMEFNYLEKVVVS 500
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVCK D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 501 RVARVCKNDLGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 546
>gi|341891462|gb|EGT47397.1| hypothetical protein CAEBREN_28753 [Caenorhabditis brenneri]
Length = 651
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 63/107 (58%), Gaps = 11/107 (10%)
Query: 4 IIYREPL-----------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL +T DS LN P FV S G V FFFRE A + +
Sbjct: 178 LIYRPPLTKNGKQLHASIRTIYSDSKWLNEPQFVGSFDVGQHVLFFFREIAHDNSFGERI 237
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++SRVARVCK D GG + R WTSF+K+RLNCSV D+P+YFD IQ
Sbjct: 238 IHSRVARVCKKDIGGRNVLRQVWTSFVKARLNCSVSADYPYYFDHIQ 284
>gi|341878171|gb|EGT34106.1| hypothetical protein CAEBREN_31462 [Caenorhabditis brenneri]
Length = 634
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 63/107 (58%), Gaps = 11/107 (10%)
Query: 4 IIYREPL-----------QTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKA 52
+IYR PL +T DS LN P FV S G V FFFRE A + +
Sbjct: 161 LIYRPPLTKNGKQLHASIRTIYSDSKWLNEPQFVGSFDVGQHVLFFFREIAHDNSFGERI 220
Query: 53 VYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
++SRVARVCK D GG + R WTSF+K+RLNCSV D+P+YFD IQ
Sbjct: 221 IHSRVARVCKKDIGGRNVLRQVWTSFVKARLNCSVSADYPYYFDHIQ 267
>gi|351713478|gb|EHB16397.1| Semaphorin-3A [Heterocephalus glaber]
Length = 821
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P FVS+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 272 HHHPIRTEQHDSRWLNDPRFVSAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 331
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 332 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPSGIDTHFDELQ 374
>gi|348568159|ref|XP_003469866.1| PREDICTED: semaphorin-3A-like [Cavia porcellus]
Length = 772
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P FVS+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFVSAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLVCSVPGPNGIDTHFDELQ 309
>gi|332206559|ref|XP_003252360.1| PREDICTED: semaphorin-3A [Nomascus leucogenys]
Length = 771
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPKFISAHLISESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|431839065|gb|ELK00993.1| Semaphorin-3A [Pteropus alecto]
Length = 734
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 169 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHTGKATHARIG 228
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 229 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 271
>gi|297681168|ref|XP_002818337.1| PREDICTED: semaphorin-3A [Pongo abelii]
Length = 771
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPKFISAHLISESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|5174673|ref|NP_006071.1| semaphorin-3A precursor [Homo sapiens]
gi|114614258|ref|XP_001160854.1| PREDICTED: semaphorin-3A isoform 3 [Pan troglodytes]
gi|8134674|sp|Q14563.1|SEM3A_HUMAN RecName: Full=Semaphorin-3A; AltName: Full=Semaphorin III;
Short=Sema III; Flags: Precursor
gi|436560|gb|AAA65938.1| semaphorin-III [Homo sapiens]
gi|51094940|gb|EAL24185.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Homo sapiens]
gi|111494030|gb|AAI11417.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Homo sapiens]
gi|119597388|gb|EAW76982.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Homo sapiens]
gi|410263800|gb|JAA19866.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Pan troglodytes]
gi|410301288|gb|JAA29244.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Pan troglodytes]
Length = 771
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPKFISAHLISESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|344270784|ref|XP_003407222.1| PREDICTED: semaphorin-3A-like [Loxodonta africana]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|397504405|ref|XP_003822787.1| PREDICTED: semaphorin-3A [Pan paniscus]
Length = 771
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPKFISAHLISESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|703190|gb|AAA73934.1| semaphorin III, partial [Mus musculus]
Length = 666
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 101 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 160
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 161 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 203
>gi|8394255|ref|NP_059006.1| semaphorin-3A precursor [Rattus norvegicus]
gi|8134665|sp|Q63548.1|SEM3A_RAT RecName: Full=Semaphorin-3A; AltName: Full=Semaphorin III;
Short=Sema III; Flags: Precursor
gi|1171619|emb|CAA64607.1| semaphorin III/collapsin-1 [Rattus norvegicus]
gi|149029001|gb|EDL84295.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Rattus norvegicus]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|426227495|ref|XP_004007853.1| PREDICTED: semaphorin-3A [Ovis aries]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHTGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|410952174|ref|XP_003982758.1| PREDICTED: semaphorin-3A [Felis catus]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHTGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|351711688|gb|EHB14607.1| Semaphorin-6B [Heterocephalus glaber]
Length = 888
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D +IYR L+T ++DS P FV ++ VYFFFRE A+EF K V S
Sbjct: 201 IDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVQWRSHVYFFFREIAMEFNYLEKVVVS 260
Query: 56 RVARVCKYDRGG-PHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
RVARVC D GG P +WTSFLK+RLNCSVPGD FYF+ +Q
Sbjct: 261 RVARVCTNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQA 306
>gi|358411781|ref|XP_617961.6| PREDICTED: semaphorin-3A [Bos taurus]
Length = 737
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 172 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHTGKATHARIG 231
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 232 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 274
>gi|74183783|dbj|BAE24487.1| unnamed protein product [Mus musculus]
Length = 688
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|31543681|ref|NP_033178.2| semaphorin-3A precursor [Mus musculus]
gi|340523100|ref|NP_001230001.1| semaphorin-3A precursor [Mus musculus]
gi|340523102|ref|NP_001230002.1| semaphorin-3A precursor [Mus musculus]
gi|18654370|gb|AAL77611.1|L41541_1 collapsin/semaphorin III [Mus musculus]
gi|2055316|dbj|BAA19773.1| semaphorin 3A [Mus musculus]
gi|34785839|gb|AAH57588.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Mus musculus]
gi|60552594|gb|AAH90844.1| Sema3a protein [Mus musculus]
gi|148706754|gb|EDL38701.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Mus musculus]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|341942015|sp|O08665.2|SEM3A_MOUSE RecName: Full=Semaphorin-3A; AltName: Full=Semaphorin III;
Short=Sema III; AltName: Full=Semaphorin-D; Short=Sema
D; Flags: Precursor
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|149705894|ref|XP_001491284.1| PREDICTED: semaphorin-3A-like [Equus caballus]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVAR 59
P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+ +
Sbjct: 208 HHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHTGKATHARIGQ 267
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+CK D GG N+WT+FLKSRL CSVPG +FDE+Q
Sbjct: 268 ICKNDFGGHRSLVNKWTTFLKSRLICSVPGPNGIDTHFDELQ 309
>gi|109067651|ref|XP_001096722.1| PREDICTED: semaphorin-3A-like [Macaca mulatta]
Length = 734
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 169 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 228
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 229 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 271
>gi|73981844|ref|XP_849675.1| PREDICTED: semaphorin-3A isoform 2 [Canis lupus familiaris]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHTGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|301756312|ref|XP_002914005.1| PREDICTED: semaphorin-3A-like [Ailuropoda melanoleuca]
gi|281347084|gb|EFB22668.1| hypothetical protein PANDA_001840 [Ailuropoda melanoleuca]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHTGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|402864351|ref|XP_003896434.1| PREDICTED: semaphorin-3A, partial [Papio anubis]
Length = 762
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|395818533|ref|XP_003782679.1| PREDICTED: semaphorin-3A [Otolemur garnettii]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLLCSVPGPNGIDTHFDELQ 309
>gi|354485785|ref|XP_003505062.1| PREDICTED: semaphorin-3A-like [Cricetulus griseus]
Length = 772
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|393906674|gb|EFO16578.2| hypothetical protein LOAG_11927 [Loa loa]
Length = 491
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 23 PNFVSSLTQGDFVYFFFRETAVEFINCGK-AVYSRVARVCKYDRGGPHRFRNRWTSFLKS 81
P ++ + +VY + RE AVE +C A+YSR+AR+C+ D GGP + N WTSF+K+
Sbjct: 2 PLYIYTRNAKRYVYIWLREQAVEHESCNDGAIYSRIARLCRSDHGGPRPYSNEWTSFVKA 61
Query: 82 RLNCSVPGDFPFYFDEIQV 100
RLNCS+PG +PFYFD+I+
Sbjct: 62 RLNCSIPGHYPFYFDQIEA 80
>gi|344244054|gb|EGW00158.1| Semaphorin-3A [Cricetulus griseus]
Length = 758
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|296209815|ref|XP_002807088.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3A-like [Callithrix
jacchus]
Length = 772
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D +YFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPKFISAHLIPESDNPEDDKIYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|452085175|ref|NP_001263630.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A precursor [Bos taurus]
gi|296488589|tpg|DAA30702.1| TPA: semaphorin-3A-like [Bos taurus]
gi|440902881|gb|ELR53615.1| Semaphorin-3A [Bos grunniens mutus]
Length = 772
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHTGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|327273401|ref|XP_003221469.1| PREDICTED: semaphorin-3A-like [Anolis carolinensis]
Length = 776
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D +YFFFRE A++ + GKA ++R+
Sbjct: 211 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKIYFFFRENAIDGEHSGKATHARIG 270
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 271 QICKNDFGGHRSLVNKWTTFLKARLMCSVPGPNGIDTHFDELQ 313
>gi|51247254|pdb|1Q47|A Chain A, Structure Of The Semaphorin 3a Receptor-Binding Module
gi|51247255|pdb|1Q47|B Chain B, Structure Of The Semaphorin 3a Receptor-Binding Module
Length = 495
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 182 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 241
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 242 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 284
>gi|224092966|ref|XP_002186657.1| PREDICTED: semaphorin-3A isoform 1 [Taeniopygia guttata]
Length = 808
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P FVS+ + D +YFFFRE A++ + GKA ++R+
Sbjct: 243 HHHPIRTEQHDSRWLNDPRFVSAHLIPESDNPEDDKIYFFFRENAIDGEHTGKATHARIG 302
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 303 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 345
>gi|8134683|sp|Q90607.1|SEM3A_CHICK RecName: Full=Semaphorin-3A; AltName: Full=Collapsin-1;
Short=COLL-1; Flags: Precursor
gi|410079|gb|AAC59638.1| collapsin [Gallus gallus]
Length = 772
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D +YFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKIYFFFRENAIDGEHTGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|426356748|ref|XP_004045717.1| PREDICTED: semaphorin-3A-like, partial [Gorilla gorilla gorilla]
Length = 344
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 67 HHHPIRTEQHDSRWLNDPKFISAHLISESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 126
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 127 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 169
>gi|312092881|ref|XP_003147491.1| hypothetical protein LOAG_11927 [Loa loa]
Length = 479
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 34 FVYFFFRETAVEFINCGK-AVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFP 92
+VY + RE AVE +C A+YSR+AR+C+ D GGP + N WTSF+K+RLNCS+PG +P
Sbjct: 1 YVYIWLREQAVEHESCNDGAIYSRIARLCRSDHGGPRPYSNEWTSFVKARLNCSIPGHYP 60
Query: 93 FYFDEIQV 100
FYFD+I+
Sbjct: 61 FYFDQIEA 68
>gi|30172710|gb|AAP22350.1| unknown [Homo sapiens]
Length = 301
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 24 HHHPIRTEQHDSRWLNDPKFISAHLISESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 83
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 84 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 126
>gi|449273917|gb|EMC83260.1| Semaphorin-3A [Columba livia]
Length = 772
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D +YFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKIYFFFRENAIDGEHTGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|301626126|ref|XP_002942249.1| PREDICTED: semaphorin-6B-like [Xenopus (Silurana) tropicalis]
Length = 537
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYS 55
+D ++YR L++ ++DS P FV ++ + VYFFFRE A+EF K V S
Sbjct: 196 IDAVLYRSLGPRLALRSVKHDSKWFKDPYFVHAVEWKEHVYFFFREVAMEFNYLEKVVVS 255
Query: 56 RVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RVARVCK D GG R +++SFLK+RLNCSVPGD FYF+ IQ
Sbjct: 256 RVARVCKNDMGGSQRVLEKQFSSFLKARLNCSVPGDSHFYFNVIQ 300
>gi|347921995|ref|NP_990308.2| semaphorin-3A [Gallus gallus]
Length = 808
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D +YFFFRE A++ + GKA ++R+
Sbjct: 243 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKIYFFFRENAIDGEHTGKATHARIG 302
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 303 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 345
>gi|417404511|gb|JAA49004.1| Putative semaphorin [Desmodus rotundus]
Length = 771
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+ S + D +YFFFRE A++ + GKA ++R++
Sbjct: 207 HHHPVRTEQHDSRWLNDPKFIGAHLIPESDNPEDDKIYFFFRENAIDVEHTGKATHARIS 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|409107366|pdb|4GZ8|A Chain A, Mouse Semaphorin 3a, Domains Sema-Psi-Ig
gi|409107367|pdb|4GZ8|B Chain B, Mouse Semaphorin 3a, Domains Sema-Psi-Ig
Length = 667
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 190 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 249
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 250 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 292
>gi|355718498|gb|AES06288.1| sema domain, transmembrane domain , and cytoplasmic domain, 6A
[Mustela putorius furo]
Length = 354
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 26 VSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR-FRNRWTSFLKSRLN 84
V ++ GD++YFFFRE AVE+ GK V+ RVA+VCK D GG R +WTSFLK+RLN
Sbjct: 1 VQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLN 60
Query: 85 CSVPGDFPFYFDEIQV 100
CSVPGD FYF+ +Q
Sbjct: 61 CSVPGDSHFYFNILQA 76
>gi|410338769|gb|JAA38331.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Pan troglodytes]
Length = 771
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPKFISAHLISESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL C+VPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICAVPGPNGIDTHFDELQ 309
>gi|345327791|ref|XP_001506000.2| PREDICTED: semaphorin-3A-like [Ornithorhynchus anatinus]
Length = 773
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICRNDFGGHRSLVNKWTTFLKARLICSVPGSNGIDTHFDELQ 309
>gi|409107375|pdb|4GZA|G Chain G, Complex Of Mouse Plexin A2 - Semaphorin 3a - Neuropilin-1
Length = 538
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 190 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 249
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 250 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 292
>gi|432857871|ref|XP_004068767.1| PREDICTED: semaphorin-3D-like [Oryzias latipes]
Length = 770
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 62/99 (62%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE YD LN P+FVSS + D +YFFF+E AVE + VYSRVARVCK
Sbjct: 199 IRTEAYDHNWLNEPDFVSSFSIPDTHSPDDDKIYFFFKEKAVEAEQWDRRVYSRVARVCK 258
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG NRWT+FLK+RL CSVPG +FDE+Q
Sbjct: 259 NDLGGKRSLINRWTTFLKARLVCSVPGPSGVDTHFDELQ 297
>gi|350596979|ref|XP_003361861.2| PREDICTED: semaphorin-3A-like, partial [Sus scrofa]
Length = 558
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 241 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHTGKATHARIG 300
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 301 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 343
>gi|395539084|ref|XP_003771503.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3A-like [Sarcophilus
harrisii]
Length = 750
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISVHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|334348349|ref|XP_001369710.2| PREDICTED: semaphorin-3A-like [Monodelphis domestica]
Length = 772
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVS-------SLTQGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISVHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|326912514|ref|XP_003202594.1| PREDICTED: semaphorin-3A-like [Meleagris gallopavo]
Length = 438
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D +YFFFRE A++ + GKA ++R+
Sbjct: 44 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKIYFFFRENAIDGEHTGKATHARIG 103
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 104 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 146
>gi|291394889|ref|XP_002713889.1| PREDICTED: semaphorin-3A-like [Oryctolagus cuniculus]
Length = 770
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 9/101 (8%)
Query: 8 EPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARV 60
P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+ ++
Sbjct: 209 HPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIGQI 268
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 269 CKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|403257161|ref|XP_003921200.1| PREDICTED: semaphorin-3A [Saimiri boliviensis boliviensis]
Length = 772
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVS-------SLTQGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S + D +YFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPKFISVHLIPESDNPEDDKIYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|432863501|ref|XP_004070098.1| PREDICTED: semaphorin-3ab-like [Oryzias latipes]
Length = 781
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
P++TEQ+DS LN P F+ + + D +Y FFRE A+E + GKAVY+R+ +
Sbjct: 210 HHPIRTEQHDSRWLNDPRFLGIYLIPENDNPEDDKIYLFFRENAMEGEHAGKAVYARIGQ 269
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
+CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 270 LCKNDLGGHRSLVNKWTTFLKARLICSVPGSNGIDTHFDELQ 311
>gi|410899178|ref|XP_003963074.1| PREDICTED: semaphorin-3B-like [Takifugu rubripes]
Length = 783
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
R ++TEQ+DS LN P FV S D V+FFFRETAVE GK+ YSR+ +
Sbjct: 205 RPSIRTEQHDSRWLNEPKFVGSFWVPESENPDDDKVFFFFRETAVEAQGLGKSTYSRIGQ 264
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+C+ D GG N+WT+FLK+RL CSVPG YFDE++
Sbjct: 265 LCRNDMGGQRSLVNKWTTFLKTRLICSVPGADGSDTYFDELR 306
>gi|47212969|emb|CAF93357.1| unnamed protein product [Tetraodon nigroviridis]
Length = 710
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
R ++TEQ+DS LN P FV S D V+FFFRETAVE GK+ YSR+ +
Sbjct: 182 RPSIRTEQHDSRWLNEPKFVGSFWVPESENPDDDKVFFFFRETAVEAQGLGKSTYSRIGQ 241
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+C+ D GG N+WT+FLK+RL CSVPG YFDE++
Sbjct: 242 LCRNDMGGQRSLVNKWTTFLKTRLICSVPGADGSDTYFDELR 283
>gi|158260931|dbj|BAF82643.1| unnamed protein product [Homo sapiens]
Length = 771
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPKFISAHLISESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++CK D GG ++WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QICKNDFGGHRSLVSKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|432866025|ref|XP_004070667.1| PREDICTED: semaphorin-3B-like [Oryzias latipes]
Length = 805
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
R ++TEQ+DS LN P FV S D V+FFFRETAVE GK+ YSR+ +
Sbjct: 227 RPSIRTEQHDSRWLNEPKFVGSFWVPESENPDDDKVFFFFRETAVEAQGLGKSTYSRIGQ 286
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+C+ D GG N+WT+FLK+RL CSVPG YFDE++
Sbjct: 287 LCRNDLGGQRSLVNKWTTFLKTRLICSVPGADGSDTYFDELR 328
>gi|348514724|ref|XP_003444890.1| PREDICTED: semaphorin-3B [Oreochromis niloticus]
Length = 806
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
R ++TEQ+DS LN P FV S D V+FFFRETAVE GK+ YSR+ +
Sbjct: 235 RPSVRTEQHDSRWLNEPKFVGSFWVPESENPDDDKVFFFFRETAVEAQGLGKSTYSRIGQ 294
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+C+ D GG N+WT+FLK+RL CSVPG YFDE++
Sbjct: 295 LCRNDMGGQRSLVNKWTTFLKTRLICSVPGADGSDTYFDELR 336
>gi|854330|emb|CAA59985.1| semaphorin D [Mus musculus]
Length = 772
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVAR 59
P++TEQ+DS LN P F+S+ + D VYFFFRE A+ + GKA ++R+ +
Sbjct: 208 HHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIGGEHSGKATHARIGQ 267
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 268 ICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|301611559|ref|XP_002935301.1| PREDICTED: semaphorin-3A-like [Xenopus (Silurana) tropicalis]
Length = 766
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
P++TEQ+DS LN P F+ S + D VYFFFRE A++ + GKA ++R+ +
Sbjct: 209 HHPIRTEQHDSRWLNDPRFIGAYLVPESDNPEDDKVYFFFRENAIDGEHTGKATHARIGQ 268
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 269 LCKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 310
>gi|147902059|ref|NP_001079324.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A precursor [Xenopus laevis]
gi|20384677|gb|AAK38166.1| semaphorin 3A [Xenopus laevis]
Length = 774
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
P++TEQ+DS LN P F+ S + D VYFFFRE A++ + GKA ++R+ +
Sbjct: 209 HHPIRTEQHDSRWLNDPRFIGAYLVPESDNPEDDKVYFFFRENAIDGEHTGKATHARIGQ 268
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 269 LCKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 310
>gi|402577010|gb|EJW70967.1| hypothetical protein WUBG_18126, partial [Wuchereria bancrofti]
Length = 154
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 34 FVYFFFRETAVEFINCGK-AVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFP 92
+VY +FRE +VE C A+YSRVAR+C+ D GGP + N WTSF+K+RLNCS+PG +P
Sbjct: 1 YVYIWFREQSVEHECCNDGAIYSRVARLCRSDNGGPRPYSNEWTSFVKARLNCSIPGHYP 60
Query: 93 FYFDEIQV 100
FYFD+I+
Sbjct: 61 FYFDQIEA 68
>gi|355560865|gb|EHH17551.1| hypothetical protein EGK_13978 [Macaca mulatta]
Length = 772
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 9/103 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+ P++TEQ+DS LN P F+S+ + D VYFFFRE A++ + GKA ++R+
Sbjct: 207 HHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+ C+ D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 QKCRNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQ 309
>gi|348505773|ref|XP_003440435.1| PREDICTED: semaphorin-3ab-like [Oreochromis niloticus]
Length = 791
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
P++TEQ+DS LN P F+ S + D +Y FFRE A++ + GKA ++RV +
Sbjct: 202 HHPIRTEQHDSRWLNDPRFLGIHLISESDNPEDDKIYLFFRENAIDGEHTGKATHARVGQ 261
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
+CK D GG N+WT+FLK+RL CSVPG+ +FDE+Q
Sbjct: 262 LCKNDLGGHRSLVNKWTTFLKARLICSVPGNNGIDTHFDELQ 303
>gi|410907439|ref|XP_003967199.1| PREDICTED: semaphorin-3ab-like [Takifugu rubripes]
Length = 796
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Query: 9 PLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
P++TEQ+DS LN P FV S + D +Y FF+E A++ + GKA ++RV ++C
Sbjct: 211 PIRTEQHDSRWLNDPRFVAVHLVPESDNQEDDKIYLFFKENAIDGEHAGKATHARVGQLC 270
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
K D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 271 KNDLGGHRSLVNKWTTFLKARLICSVPGSNGIDTHFDELQ 310
>gi|156405916|ref|XP_001640977.1| predicted protein [Nematostella vectensis]
gi|156228114|gb|EDO48914.1| predicted protein [Nematostella vectensis]
Length = 990
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGP- 68
L+T + D L+ FV+S G +VYFFFRE AVE + CGK YSRVAR+CK D GG
Sbjct: 209 LRTLRGDDKWLSDAEFVTSFDVGLYVYFFFREAAVENMKCGKTRYSRVARICKGDYGGSE 268
Query: 69 HRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ +N + +F K+RLNCS G++P Y+D IQ
Sbjct: 269 YVMKNTFVTFNKARLNCSTTGEYPAYYDLIQ 299
>gi|390344880|ref|XP_786421.3| PREDICTED: semaphorin-1A-like [Strongylocentrotus purpuratus]
Length = 707
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 10 LQTEQYDSMSLNAPNFVSS-LTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGP 68
L T Y S S+N +FV L GD VY+F+RE AVE +N GK VYSRVARVCK D G
Sbjct: 269 LDTTSYFSRSVNEADFVGKPLVIGDRVYYFYRELAVEHVNQGKMVYSRVARVCKDDVG-- 326
Query: 69 HRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
W+SF K+RL+C + GDF Y++EIQ+
Sbjct: 327 --ISRYWSSFQKARLSCFIDGDFALYYNEIQI 356
>gi|47215171|emb|CAG01437.1| unnamed protein product [Tetraodon nigroviridis]
Length = 461
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 68/129 (52%), Gaps = 30/129 (23%)
Query: 1 MDPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGK---- 51
+D +IYR L+T ++DS P FVS++ G +YFFFRE A+EF K
Sbjct: 77 IDAVIYRSLGDSPALRTVKHDSKWFREPYFVSAVEWGPHIYFFFREIAMEFNYLEKLFIK 136
Query: 52 --------------------AVYSRVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGD 90
V SRVARVCK DRGG R +WTSFLK+RLNCSVPGD
Sbjct: 137 SLKTRSFYLPANFPVPEQTQVVVSRVARVCKRDRGGSQRVLEKQWTSFLKARLNCSVPGD 196
Query: 91 FPFYFDEIQ 99
FYF+ +
Sbjct: 197 SHFYFNLLH 205
>gi|355718519|gb|AES06295.1| sema domain, transmembrane domain , and cytoplasmic domain, 6D
[Mustela putorius furo]
Length = 186
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 38 FFRETAVEFINCGKAVYSRVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFD 96
FFRE AVE N GKAVYSRVAR+CK D GG R WTSFLK+RLNCSVPGD FYFD
Sbjct: 1 FFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFD 60
Query: 97 EIQ 99
+Q
Sbjct: 61 VLQ 63
>gi|198428903|ref|XP_002125874.1| PREDICTED: similar to sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6A [Ciona intestinalis]
Length = 1244
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 9 PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFIN-CGKAVYSRVARVCKYDRGG 67
P T S L P FV + + V+ FFRE AVE + K ++SRV +VCK D GG
Sbjct: 229 PRLTTDEASRWLGDPRFVGMVDTMEKVFIFFREEAVEASDQTDKVIFSRVGQVCKNDEGG 288
Query: 68 PHRF-RNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ RN+WT+F K+RLNCS+PGD PFYF+EIQ
Sbjct: 289 SYSLLRNKWTTFFKARLNCSIPGDRPFYFNEIQ 321
>gi|239985641|ref|NP_001121818.1| semaphorin-3B precursor [Danio rerio]
Length = 775
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TEQ+DS LN P F+++ D V+FFFRETAVE GK YSR+ ++C+
Sbjct: 210 IRTEQHDSRWLNEPKFIAAFGVPESDNPDDDKVFFFFRETAVEAQGFGKVTYSRIGQLCR 269
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+WT+FLK+RL CSVPG+ +FDE++
Sbjct: 270 NDMGGQRSLVNKWTTFLKARLVCSVPGNDGTETHFDELR 308
>gi|296222997|ref|XP_002807556.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4C [Callithrix jacchus]
Length = 828
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R P++TE Y + LN P+FV S + G F VYFFFRE AVE+
Sbjct: 188 EPIILRNMGPHHPMKTE-YLAFWLNEPHFVGSAYIPESVGSFTGDDDKVYFFFRERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP-DWQLYFNQLQ 298
>gi|68400482|ref|XP_687092.1| PREDICTED: semaphorin-3D [Danio rerio]
Length = 758
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE Y LN P FV S + D VYFFF+ETAVE K +YSRVARVCK
Sbjct: 215 IRTEAYQDHWLNEPEFVGSYSIPDTHSLDDDKVYFFFKETAVESNQLDKRIYSRVARVCK 274
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSV--PGDFPFYFDEIQ 99
D GG NRW++FLK+RL C+V PG +FDE++
Sbjct: 275 NDIGGKRSLINRWSTFLKARLVCTVPGPGGMDTHFDELE 313
>gi|403301298|ref|XP_003941332.1| PREDICTED: semaphorin-4C [Saimiri boliviensis boliviensis]
Length = 820
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R P++TE Y + LN P+FV S + G F VYFFFRE AVE+
Sbjct: 188 EPIILRNMGPHHPMKTE-YLAFWLNEPHFVGSAYIPESVGSFTGDDDKVYFFFRERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP-DWQLYFNQLQ 298
>gi|94733771|emb|CAK04123.1| novel protein similar to vertebratesema domain, immunoglobulin
domain (Ig), short basic domain, secreted, (semaphorin)
3D (SEMA3D) [Danio rerio]
Length = 409
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE Y LN P FV S + D VYFFF+ETAVE K +YSRVARVCK
Sbjct: 159 IRTEAYQDHWLNEPEFVGSYSIPDTHSLDDDKVYFFFKETAVESNQLDKRIYSRVARVCK 218
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSV--PGDFPFYFDEIQ 99
D GG NRW++FLK+RL C+V PG +FDE++
Sbjct: 219 NDIGGKRSLINRWSTFLKARLVCTVPGPGGMDTHFDELE 257
>gi|348541195|ref|XP_003458072.1| PREDICTED: semaphorin-3D-like [Oreochromis niloticus]
Length = 1349
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE +D LN P+FV S + D VYFFF+E AVE K VYSRVARVCK
Sbjct: 761 IRTEAFDHNWLNEPDFVGSFSIPDTRSPDDDKVYFFFKERAVEAGQWDKRVYSRVARVCK 820
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG NRWT+FLK+RL CSVPG FDE++
Sbjct: 821 NDLGGRRSLINRWTTFLKARLVCSVPGPSGVDTQFDELE 859
>gi|190339706|gb|AAI63261.1| Semaphorin 3ab [Danio rerio]
Length = 778
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 8 EPLQTEQYDSMSLNAPNFVS-------SLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
P++TEQ+DS LN P FVS ++ D +Y FFRE A++ KA ++R+ ++
Sbjct: 210 HPIRTEQHDSRWLNDPRFVSVHLIPESDNSEDDKIYLFFRENAIDGEQISKATHARIGQL 269
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 270 CKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGIDTHFDELQ 310
>gi|18859355|ref|NP_571136.1| semaphorin-3ab precursor [Danio rerio]
gi|8134733|sp|Q9W686.1|SE3AB_DANRE RecName: Full=Semaphorin-3ab; AltName: Full=Semaphorin-1B; AltName:
Full=Semaphorin-Z1B; Short=Sema Z1B; Flags: Precursor
gi|4704473|gb|AAD28103.1|AF083382_1 semaphorin Z1b [Danio rerio]
Length = 778
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVS-------SLTQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
P++TEQ+DS LN P FVS + D +Y FFRE A++ KA ++R+ +
Sbjct: 209 HHPIRTEQHDSRWLNDPRFVSVHLIPESDNAEDDKIYLFFRENAIDGEQISKATHARIGQ 268
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 269 LCKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGIDTHFDELQ 310
>gi|134085182|emb|CAM60071.1| sema3ab [Danio rerio]
Length = 765
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVS-------SLTQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
P++TEQ+DS LN P FVS + D +Y FFRE A++ KA ++R+ +
Sbjct: 209 HHPIRTEQHDSRWLNDPRFVSVHLIPESDNAEDDKIYLFFRENAIDGEQISKATHARIGQ 268
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 269 LCKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGIDTHFDELQ 310
>gi|196000590|ref|XP_002110163.1| hypothetical protein TRIADDRAFT_53875 [Trichoplax adhaerens]
gi|190588287|gb|EDV28329.1| hypothetical protein TRIADDRAFT_53875 [Trichoplax adhaerens]
Length = 1065
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPH 69
L T+ LNAP F + ++ +F ET EF AVY R+AR+CK D GG +
Sbjct: 175 LNTDGSSPTWLNAPRFAGFHESLNHMFVWFSETIQEFQEADNAVYPRIARICKNDIGGVY 234
Query: 70 RFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
RN+WT+F K+RLNCS+PG FPFYF I+
Sbjct: 235 ILRNQWTTFAKARLNCSLPGKFPFYFRNIK 264
>gi|432943182|ref|XP_004083100.1| PREDICTED: semaphorin-3aa [Oryzias latipes]
Length = 859
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 9/101 (8%)
Query: 8 EPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
P++TEQ+DS LN P F+ S + D ++ FF+E A++ + GKA +R+A++
Sbjct: 207 HPIRTEQHDSRWLNDPRFIGVHLIPESDNPEDDKIFLFFKENAMDGEHTGKATIARIAQL 266
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 CKNDMGGHRSLVNKWTTFLKARLVCSVPGVNGIDTHFDELQ 307
>gi|410918741|ref|XP_003972843.1| PREDICTED: semaphorin-3aa-like [Takifugu rubripes]
Length = 778
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 8 EPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
P++TEQ+DS LN P FV S + D ++ FF+E A++ + GKA SR+ ++
Sbjct: 207 HPIRTEQHDSRWLNDPRFVGVHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQL 266
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 267 CKNDMGGHRSLVNKWTTFLKARLLCSVPGVNGIDTHFDELQ 307
>gi|188528965|ref|NP_001120908.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B precursor [Xenopus (Silurana)
tropicalis]
gi|183986447|gb|AAI66183.1| sema3b protein [Xenopus (Silurana) tropicalis]
Length = 773
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
R PL+TEQ+DS LN P FV S D +YFFF+ET VE K Y+R+ +
Sbjct: 204 RPPLRTEQHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFKETPVEGAGGVKQSYARIGQ 263
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD---FPFYFDEIQ 99
+C+ D GG N+WT+FLK+RL CSVPG+ +FDE++
Sbjct: 264 ICRNDLGGQRSLVNKWTTFLKARLVCSVPGNEIGGDTHFDELR 306
>gi|190337944|gb|AAI62381.1| Semaphorin 3aa [Danio rerio]
Length = 860
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Query: 9 PLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
P++TEQ+DS LN P F+ S + D ++ FF+E A++ + GKA SR+ ++C
Sbjct: 211 PIRTEQHDSRWLNEPRFLGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQLC 270
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
K D GG N+WT+FLK++L CSVPG +FDE+Q
Sbjct: 271 KNDMGGHRSLVNKWTTFLKAKLTCSVPGLNGIDTHFDELQ 310
>gi|18859353|ref|NP_571135.1| semaphorin-3aa precursor [Danio rerio]
gi|8134734|sp|Q9W7J1.1|SE3AA_DANRE RecName: Full=Semaphorin-3aa; AltName: Full=Semaphorin-1A; AltName:
Full=Semaphorin-Z1A; Short=Sema Z1A; Flags: Precursor
gi|5499717|gb|AAD43964.1|AF086761_1 semaphorin Z1a [Danio rerio]
Length = 860
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 8 EPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
P++TEQ+DS LN P F+ S + D ++ FF+E A++ + GKA SR+ ++
Sbjct: 210 HPIRTEQHDSRWLNEPRFLGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQL 269
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
CK D GG N+WT+FLK++L CSVPG +FDE+Q
Sbjct: 270 CKNDMGGHRSLVNKWTTFLKAKLTCSVPGLNGIDTHFDELQ 310
>gi|134085180|emb|CAM60070.1| sema3aa [Danio rerio]
Length = 857
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Query: 9 PLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
P++TEQ+DS LN P F+ S + D ++ FF+E A++ + GKA SR+ ++C
Sbjct: 211 PIRTEQHDSRWLNEPRFLGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQLC 270
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
K D GG N+WT+FLK++L CSVPG +FDE+Q
Sbjct: 271 KNDMGGHRSLVNKWTTFLKAKLTCSVPGLNGIDTHFDELQ 310
>gi|190336976|gb|AAI62398.1| Semaphorin 3aa [Danio rerio]
Length = 860
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Query: 9 PLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVC 61
P++TEQ+DS LN P F+ S + D ++ FF+E A++ + GKA SR+ ++C
Sbjct: 211 PIRTEQHDSRWLNEPRFLGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQLC 270
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
K D GG N+WT+FLK++L CSVPG +FDE+Q
Sbjct: 271 KNDMGGHRSLVNKWTTFLKAKLTCSVPGLNGIDTHFDELQ 310
>gi|45421828|dbj|BAD12488.1| semaphorin 3A [Oryzias latipes]
Length = 268
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVAR 59
P++TEQ+DS LN P F+ S + D ++ FF+E A++ + GKA +R+A+
Sbjct: 68 HHPIRTEQHDSRWLNDPRFIGVHLIPESDNPEDDKIFLFFKENAMDGEHTGKATIARIAQ 127
Query: 60 VCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+CK D GG N+WT+FLK+RL CSVPG +FDE+Q
Sbjct: 128 LCKNDMGGRRSLVNKWTTFLKARLVCSVPGVNGIDTHFDELQ 169
>gi|47218382|emb|CAG01903.1| unnamed protein product [Tetraodon nigroviridis]
Length = 870
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 8 EPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
P++TEQ+DS LN P FV S + D ++ FF+E A++ + GKA SR+ ++
Sbjct: 203 HPIRTEQHDSRWLNEPRFVGVHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQL 262
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
CK D GG N+WT+FLK+RL CSVPG +FDE++
Sbjct: 263 CKNDMGGHRSLVNKWTTFLKARLLCSVPGINGIDTHFDELR 303
>gi|348514941|ref|XP_003444998.1| PREDICTED: semaphorin-3aa-like [Oreochromis niloticus]
Length = 777
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 8 EPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
P++TEQ+DS LN P FV S + D ++ FF+E A++ + GKA +R+ ++
Sbjct: 207 HPIRTEQHDSRWLNDPRFVGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATIARIGQL 266
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
CK D GG N+WT+FLK+RL C+VPG +FDE+Q
Sbjct: 267 CKNDMGGHRSLVNKWTTFLKARLICAVPGVNGIDTHFDELQ 307
>gi|296225273|ref|XP_002758276.1| PREDICTED: semaphorin-3B [Callithrix jacchus]
Length = 780
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV D +YFFFRETAVE G+ + SRV
Sbjct: 205 RPSLRTEPHDSRWLNEPKFVKVFWIPENENPDDDKIYFFFRETAVETAPAMGRLLVSRVG 264
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 265 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 306
>gi|388454697|ref|NP_001253387.1| semaphorin-4C precursor [Macaca mulatta]
gi|355565914|gb|EHH22343.1| hypothetical protein EGK_05585 [Macaca mulatta]
gi|380789533|gb|AFE66642.1| semaphorin-4C precursor [Macaca mulatta]
Length = 833
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSS---------LT-QGDFVYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S LT D VYFFFRE AVE
Sbjct: 188 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSLTGDDDKVYFFFRERAVES 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP-DWQLYFNQLQ 298
>gi|10441913|gb|AAG17234.1|AF217991_1 unknown [Homo sapiens]
Length = 457
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|2880035|gb|AAC02731.1| semaphorin V [Homo sapiens]
gi|119585469|gb|EAW65065.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_d [Homo sapiens]
Length = 750
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 208 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 267
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 268 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 309
>gi|363738578|ref|XP_423897.3| PREDICTED: semaphorin-3B [Gallus gallus]
Length = 526
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFI-NCGKAVYSRVA 58
R ++TEQ+DS LN P FV S D +YFFFRETAVE GKA SR+
Sbjct: 188 RPSVRTEQHDSRWLNEPKFVDVFWVPESENPDDDKIYFFFRETAVERQQGLGKASVSRIG 247
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL C+VPG +FDE++
Sbjct: 248 QICRNDVGGQRSLVNKWTTFLKARLVCAVPGTDGADTHFDELR 290
>gi|397496062|ref|XP_003818862.1| PREDICTED: semaphorin-3B isoform 1 [Pan paniscus]
gi|410291182|gb|JAA24191.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Pan troglodytes]
Length = 749
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|402891629|ref|XP_003909045.1| PREDICTED: semaphorin-4C [Papio anubis]
Length = 833
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 188 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP-DWQLYFNQLQ 298
>gi|403291340|ref|XP_003936754.1| PREDICTED: semaphorin-3B [Saimiri boliviensis boliviensis]
Length = 676
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ + SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPAMGRLLVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|444513574|gb|ELV10420.1| Semaphorin-3B [Tupaia chinensis]
Length = 742
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|139948846|ref|NP_001077334.1| semaphorin-4E isoform 2 precursor [Danio rerio]
gi|134054522|emb|CAM73255.1| sema4e [Danio rerio]
Length = 766
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 14/100 (14%)
Query: 2 DPIIYR---EPLQTEQYDSMSLNAPNFV--SSLTQG--------DFVYFFFRETAVEFIN 48
+P++ R E ++TE + S L+ PNF+ + + +G D +Y FF ETAVE+ +
Sbjct: 190 EPVMMRSTEESIRTE-FTSTWLSEPNFIHMAHIPEGQSNPDGDDDKIYLFFSETAVEYES 248
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
C K SRVARVCK D GG + +WTSFLK+RL+C VP
Sbjct: 249 CTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCQVP 288
>gi|410951235|ref|XP_003982304.1| PREDICTED: semaphorin-3B [Felis catus]
Length = 748
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFI-NCGKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE+AVE + G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEASPSLGRQTVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD +Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDHLQ 308
>gi|355718429|gb|AES06264.1| sema domain, immunoglobulin domain , short basic domain, secreted,
3B [Mustela putorius furo]
Length = 559
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV
Sbjct: 210 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPALGRLSVSRVG 269
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 270 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGDTHFDQLQ 311
>gi|54607089|ref|NP_001005914.1| semaphorin-3B isoform 2 precursor [Homo sapiens]
gi|15559241|gb|AAH13975.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Homo sapiens]
gi|18999360|gb|AAH24220.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Homo sapiens]
gi|190690475|gb|ACE87012.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B protein [synthetic construct]
gi|190691851|gb|ACE87700.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B protein [synthetic construct]
Length = 748
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|426340617|ref|XP_004034225.1| PREDICTED: semaphorin-3B isoform 1 [Gorilla gorilla gorilla]
Length = 749
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVETAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|4759092|ref|NP_004627.1| semaphorin-3B isoform 1 precursor [Homo sapiens]
gi|8134673|sp|Q13214.1|SEM3B_HUMAN RecName: Full=Semaphorin-3B; AltName: Full=Sema A(V); AltName:
Full=Semaphorin-V; Short=Sema V; Flags: Precursor
gi|974284|gb|AAD09138.1| semaphorin V [Homo sapiens]
Length = 749
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|426340619|ref|XP_004034226.1| PREDICTED: semaphorin-3B isoform 2 [Gorilla gorilla gorilla]
Length = 635
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 94 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVETAPALGRLSVSRVG 153
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 154 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 195
>gi|397496064|ref|XP_003818863.1| PREDICTED: semaphorin-3B isoform 2 [Pan paniscus]
Length = 635
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 94 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 153
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 154 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 195
>gi|431913044|gb|ELK14794.1| Semaphorin-4C [Pteropus alecto]
Length = 867
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 67/113 (59%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R P++TE Y + LN P+FV S + G F VYFFF E AVE+
Sbjct: 201 EPIILRNMGPHHPMKTE-YLAFWLNEPHFVGSAYIPESMGSFTGDDDKVYFFFSERAVEY 259
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF++++
Sbjct: 260 DCYTEQVVARVARVCKGDLGGARTLQKKWTTFLKARLVCSAP-DWQLYFNQLR 311
>gi|14318630|gb|AAH09113.1| SEMA3B protein [Homo sapiens]
gi|119585471|gb|EAW65067.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_e [Homo sapiens]
gi|325464415|gb|ADZ15978.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [synthetic construct]
Length = 635
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 94 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 153
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 154 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 195
>gi|332216030|ref|XP_003257145.1| PREDICTED: semaphorin-3B [Nomascus leucogenys]
Length = 635
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 94 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 153
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 154 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 195
>gi|119585467|gb|EAW65063.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_b [Homo sapiens]
Length = 633
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 94 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 153
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 154 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 195
>gi|397468232|ref|XP_003805797.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4C [Pan paniscus]
Length = 833
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 188 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESMGSFTGDDDKVYFFFRERAVES 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP-NWQLYFNQLQ 298
>gi|119585468|gb|EAW65064.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_c [Homo sapiens]
gi|119585470|gb|EAW65066.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_c [Homo sapiens]
Length = 636
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 94 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 153
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 154 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 195
>gi|354476481|ref|XP_003500453.1| PREDICTED: semaphorin-3B [Cricetulus griseus]
gi|344252807|gb|EGW08911.1| Semaphorin-3B [Cricetulus griseus]
Length = 749
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV ++C
Sbjct: 210 LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPATGRMTVSRVGQIC 269
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 270 RNDLGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|395755010|ref|XP_002832676.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4C [Pongo abelii]
Length = 772
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 104 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 162
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 163 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP-NWQLYFNQLQ 214
>gi|281338327|gb|EFB13911.1| hypothetical protein PANDA_009323 [Ailuropoda melanoleuca]
Length = 735
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|224066009|ref|XP_002192378.1| PREDICTED: semaphorin-3B-like [Taeniopygia guttata]
Length = 616
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFI-NCGKAVYSRVA 58
R ++TEQ+DS LN P FV S D +YFFFRETAVE GK ++R+
Sbjct: 272 RPSIRTEQHDSRWLNEPKFVAVFWVPESEDPDDDKIYFFFRETAVERQQGLGKTSFARIG 331
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL C+VPG +FDE++
Sbjct: 332 QICRNDMGGQRSLVNKWTTFLKARLVCAVPGPDGADTHFDELR 374
>gi|209863103|ref|NP_001100372.1| semaphorin-4C precursor [Rattus norvegicus]
gi|149046375|gb|EDL99268.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C
(predicted) [Rattus norvegicus]
Length = 834
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R P++TE Y + LN P+FV S + G F +YFFF E AVE+
Sbjct: 188 EPVILRNMGPHHPIKTE-YLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF++++
Sbjct: 247 DCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAP-DWKVYFNQLR 298
>gi|410035448|ref|XP_515634.4| PREDICTED: semaphorin-4C [Pan troglodytes]
Length = 858
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 213 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 271
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 272 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP-NWQLYFNQLQ 323
>gi|121583784|ref|NP_001073411.1| semaphorin-3B precursor [Rattus norvegicus]
gi|120537404|gb|AAI29104.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Rattus norvegicus]
Length = 749
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV ++C
Sbjct: 210 LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPAMGRMTVSRVGQIC 269
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 270 RNDLGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|301770325|ref|XP_002920570.1| PREDICTED: semaphorin-3B-like [Ailuropoda melanoleuca]
Length = 748
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|395853678|ref|XP_003799331.1| PREDICTED: semaphorin-4C [Otolemur garnettii]
Length = 833
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSS----------LTQGDFVYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + D +YFFF E AVE+
Sbjct: 188 EPVILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYIPESVGSFIGDDDKIYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLVCSAP-DWQLYFNQLQ 298
>gi|410954644|ref|XP_003983973.1| PREDICTED: semaphorin-4C [Felis catus]
Length = 833
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F VYFFF E AVE+
Sbjct: 188 EPVILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLVCSAP-DWQLYFNQLQ 298
>gi|345777254|ref|XP_538464.3| PREDICTED: semaphorin-4C [Canis lupus familiaris]
Length = 833
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F VYFFF E AVE+
Sbjct: 188 EPVILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLVCSAP-DWQLYFNQLQ 298
>gi|341942016|sp|Q62177.2|SEM3B_MOUSE RecName: Full=Semaphorin-3B; AltName: Full=Semaphorin-A; Short=Sema
A; Flags: Precursor
Length = 748
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV ++C
Sbjct: 209 LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPAMGRMSVSRVGQIC 268
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 269 RNDLGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 307
>gi|301753184|ref|XP_002912440.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4C-like [Ailuropoda
melanoleuca]
Length = 831
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F VYFFF E AVE+
Sbjct: 188 EPVILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLVCSAP-DWQLYFNQLQ 298
>gi|449274941|gb|EMC83968.1| Semaphorin-3B, partial [Columba livia]
Length = 528
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFI-NCGKAVYSRVA 58
R ++TEQ+DS LN P FV S D +YFFFRETAVE GK ++R+
Sbjct: 171 RPSIRTEQHDSRWLNEPKFVAIFWVPESEDPDDDKIYFFFRETAVERQQGLGKTSFARIG 230
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL C+VPG +FDE++
Sbjct: 231 QICRNDVGGQRSLVNKWTTFLKARLVCAVPGQDGADTHFDELR 273
>gi|854324|emb|CAA59982.1| semaphorin A [Mus musculus]
Length = 748
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV ++C
Sbjct: 209 LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPAMGRMSVSRVGQIC 268
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 269 RNDLGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 307
>gi|194221286|ref|XP_001916031.1| PREDICTED: semaphorin-3B [Equus caballus]
Length = 747
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE AVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRELAVEATPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|345786926|ref|XP_541878.3| PREDICTED: semaphorin-3B [Canis lupus familiaris]
Length = 719
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGDTHFDQLQ 308
>gi|187956411|gb|AAI50759.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Mus musculus]
Length = 749
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV ++C
Sbjct: 210 LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPAMGRMSVSRVGQIC 269
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 270 RNDLGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|148689260|gb|EDL21207.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
gi|148689261|gb|EDL21208.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
gi|148689262|gb|EDL21209.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
gi|148689264|gb|EDL21211.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
gi|148689265|gb|EDL21212.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
Length = 749
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV ++C
Sbjct: 210 LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPAMGRMSVSRVGQIC 269
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 270 RNDLGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|148689263|gb|EDL21210.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_b [Mus musculus]
Length = 736
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV ++C
Sbjct: 197 LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPAMGRMSVSRVGQIC 256
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 257 RNDLGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 295
>gi|112421073|ref|NP_033179.2| semaphorin-3B precursor [Mus musculus]
gi|112421094|ref|NP_001036244.1| semaphorin-3B precursor [Mus musculus]
Length = 749
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV ++C
Sbjct: 210 LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPAMGRMSVSRVGQIC 269
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 270 RNDLGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|410206870|gb|JAA00654.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Pan
troglodytes]
gi|410254360|gb|JAA15147.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Pan
troglodytes]
gi|410288332|gb|JAA22766.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Pan
troglodytes]
gi|410336523|gb|JAA37208.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Pan
troglodytes]
Length = 833
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 188 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP-NWQLYFNQLQ 298
>gi|355718462|gb|AES06276.1| sema domain, immunoglobulin domain , transmembrane domain and short
cytoplasmic domain, 4C [Mustela putorius furo]
Length = 842
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F VYFFF E AVE+
Sbjct: 198 EPVILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEY 256
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 257 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLVCSAP-DWQLYFNQLQ 308
>gi|111598847|gb|AAH90669.1| Sema3b protein [Mus musculus]
Length = 749
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV ++C
Sbjct: 210 LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEAAPAMGRMSVSRVGQIC 269
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 270 RNDLGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|326934523|ref|XP_003213338.1| PREDICTED: semaphorin-4E-like [Meleagris gallopavo]
Length = 656
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 15/111 (13%)
Query: 2 DPIIYRE---PLQTEQYDSMSLNAPNFV----------SSLTQGDFVYFFFRETAVEFIN 48
+PII R P++TE + + LN P+FV S D +Y FF ETAVEF
Sbjct: 126 EPIILRSMQNPVRTE-FKTSWLNEPSFVGMEIVPESEFSPDGDDDKIYVFFTETAVEFEF 184
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K + SR+AR+CK D GG + RWTSFLK+RL+CSVP + F+F+ IQ
Sbjct: 185 YDKILVSRIARICKGDLGGKRLLQRRWTSFLKARLSCSVP-ELNFHFNIIQ 234
>gi|37182802|gb|AAQ89201.1| SEMA4C [Homo sapiens]
Length = 833
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 188 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAP-NWQLYFNQLQ 298
>gi|157388902|ref|NP_060259.4| semaphorin-4C precursor [Homo sapiens]
gi|47606208|sp|Q9C0C4.2|SEM4C_HUMAN RecName: Full=Semaphorin-4C; Flags: Precursor
gi|80476638|gb|AAI09104.1| Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Homo
sapiens]
gi|80478939|gb|AAI09105.1| Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Homo
sapiens]
gi|119591733|gb|EAW71327.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C, isoform
CRA_c [Homo sapiens]
gi|168275532|dbj|BAG10486.1| semaphorin-4C precursor [synthetic construct]
Length = 833
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 188 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAP-NWQLYFNQLQ 298
>gi|363744564|ref|XP_424426.3| PREDICTED: semaphorin-4D [Gallus gallus]
Length = 975
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 15/101 (14%)
Query: 2 DPIIYR----EPLQTEQYDSMSLNAPNFV----------SSLTQGDFVYFFFRETAVEFI 47
+PII R PL+TE Y LN PNFV S+ + D +YFFF E +VE+
Sbjct: 301 EPIISRNSHQSPLRTE-YAIPWLNEPNFVFADVVRADQNSTDGEDDKIYFFFTEVSVEYE 359
Query: 48 NCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
GK + R+ARVCK D+GG + +WTSFLK+RL C++P
Sbjct: 360 FVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIP 400
>gi|291393721|ref|XP_002713257.1| PREDICTED: semaphorin 3B [Oryctolagus cuniculus]
Length = 752
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE AVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRELAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|12698023|dbj|BAB21830.1| KIAA1739 protein [Homo sapiens]
Length = 963
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 318 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 376
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 377 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAP-NWQLYFNQLQ 428
>gi|426336485|ref|XP_004031500.1| PREDICTED: semaphorin-4C [Gorilla gorilla gorilla]
Length = 833
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 188 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP-NWQLYFNQLQ 298
>gi|402860035|ref|XP_003894441.1| PREDICTED: semaphorin-3B isoform 1 [Papio anubis]
Length = 749
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPENENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|355746689|gb|EHH51303.1| hypothetical protein EGM_10651 [Macaca fascicularis]
Length = 749
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPENENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|380789223|gb|AFE66487.1| semaphorin-3B isoform 2 precursor [Macaca mulatta]
gi|384949352|gb|AFI38281.1| semaphorin-3B isoform 2 precursor [Macaca mulatta]
Length = 748
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPENENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|109039520|ref|XP_001102773.1| PREDICTED: semaphorin-3B isoform 1 [Macaca mulatta]
Length = 635
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV D +YFFFRETAVE G+ SRV
Sbjct: 94 RPSLRTEPHDSRWLNEPKFVKVFWIPENENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 153
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 154 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 195
>gi|402860037|ref|XP_003894442.1| PREDICTED: semaphorin-3B isoform 2 [Papio anubis]
Length = 635
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV D +YFFFRETAVE G+ SRV
Sbjct: 94 RPSLRTEPHDSRWLNEPKFVKVFWIPENENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 153
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 154 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 195
>gi|326927795|ref|XP_003210074.1| PREDICTED: semaphorin-3B-like [Meleagris gallopavo]
Length = 556
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFI-NCGKAVYSRVA 58
R ++TEQ+DS LN P FV S D +YFFFRE AVE GKA SR+
Sbjct: 196 RPSVRTEQHDSRWLNEPKFVDVFWVPESENPDDDKIYFFFREMAVERQQGLGKASISRIG 255
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL C+VPG +FDE++
Sbjct: 256 QICRNDVGGQRSLVNKWTTFLKARLVCAVPGTDGADTHFDELR 298
>gi|332260450|ref|XP_003279302.1| PREDICTED: semaphorin-4C [Nomascus leucogenys]
Length = 833
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 188 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDVGGARTLQKKWTTFLKARLACSAP-NWQLYFNQLQ 298
>gi|348506150|ref|XP_003440623.1| PREDICTED: semaphorin-3E-like [Oreochromis niloticus]
Length = 791
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 11 QTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCKY 63
+TE+ D LN P FV S D VYFFF E ++ KAVYSR+ RVC
Sbjct: 213 RTERNDRSQLNEPKFVGSAVIPDNDDRGDDKVYFFFTEREMDAEGVTKAVYSRIGRVCAN 272
Query: 64 DRGGPHRFRNRWTSFLKSRLNCSV--PGDFPFYFDEIQ 99
D+GG NRWTSFLK+RL CSV P +FDE++
Sbjct: 273 DQGGQRMLVNRWTSFLKTRLICSVAGPNGIDTHFDELE 310
>gi|449271076|gb|EMC81669.1| Semaphorin-4D [Columba livia]
Length = 860
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 15/101 (14%)
Query: 2 DPIIYRE----PLQTEQYDSMSLNAPNFV----------SSLTQGDFVYFFFRETAVEFI 47
+PII R PL+TE Y LN PNFV S+ + D +YFFF E +VE+
Sbjct: 181 EPIISRHSHQSPLRTE-YAIPWLNEPNFVFADVIRADQNSTDGEDDKIYFFFTEVSVEYE 239
Query: 48 NCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
GK + R+ARVCK D+GG + +WTSFLK+RL C++P
Sbjct: 240 FVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIP 280
>gi|334333745|ref|XP_001378534.2| PREDICTED: semaphorin-3B [Monodelphis domestica]
Length = 764
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEF-INCGKAVYSRVA 58
R L+TEQ+DS LN P FV S D +YFFFRE AVE G+A SR+
Sbjct: 202 RPNLRTEQHDSRWLNEPTFVKVFWIPESENPDDDKIYFFFREVAVEGNPGLGRASVSRIG 261
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG 89
++C+ D GG N+WT+FLK+RL CSVPG
Sbjct: 262 QICRNDLGGQRSLVNKWTTFLKARLVCSVPG 292
>gi|311252168|ref|XP_003124961.1| PREDICTED: semaphorin-4C [Sus scrofa]
Length = 833
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F VYFFF E AVE+
Sbjct: 188 EPVILRNMGPHHAMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDVGGARTLQRKWTTFLKARLVCSAP-DWQLYFNQLQ 298
>gi|119591731|gb|EAW71325.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C, isoform
CRA_a [Homo sapiens]
Length = 886
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 241 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVES 299
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 300 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAP-NWQLYFNQLQ 351
>gi|363743888|ref|XP_418232.3| PREDICTED: semaphorin-4E-like [Gallus gallus]
Length = 763
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 66/111 (59%), Gaps = 15/111 (13%)
Query: 2 DPIIYRE---PLQTEQYDSMSLNAPNFV----------SSLTQGDFVYFFFRETAVEFIN 48
+PII R P++TE + + LN P+FV S D +Y FF ETAVEF
Sbjct: 126 EPIILRSMQNPVRTE-FKTSWLNEPSFVGMEIVPESEFSPDGDDDKIYVFFTETAVEFEF 184
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
K + SR+AR+CK D GG + RWTSFLK+RL+CS+P + F+F+ IQ
Sbjct: 185 YDKILVSRIARICKGDLGGKRLLQRRWTSFLKARLSCSIP-ELNFHFNIIQ 234
>gi|410037129|ref|XP_001149891.3| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3B [Pan troglodytes]
Length = 684
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVARVC 61
L+TE +D + LN P FV S D +YFFFRETAVE G+ SRV ++C
Sbjct: 145 LRTEPHDFLWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVGQIC 204
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 205 RNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 243
>gi|417404358|gb|JAA48938.1| Putative semaphorin [Desmodus rotundus]
Length = 750
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P F+ S D +YFFFRE+AVE G+ SR+
Sbjct: 207 RPSLRTEPHDSRWLNEPKFIKVFWIPESENPDDDKIYFFFRESAVETSPALGRLSVSRIG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGIEGDTHFDQLQ 308
>gi|20086412|dbj|BAB88870.1| semaphorin 3B [Homo sapiens]
Length = 754
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD+++
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLR 308
>gi|354472226|ref|XP_003498341.1| PREDICTED: semaphorin-4C [Cricetulus griseus]
gi|344250347|gb|EGW06451.1| Semaphorin-4C [Cricetulus griseus]
Length = 834
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+PII R P++TE Y + LN P+FV S + G F VYFFF E AVE+
Sbjct: 188 EPIILRNMGPHHPVKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK++L C+ P D+ YF++++
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKAQLACAAP-DWKVYFNQLR 298
>gi|119585466|gb|EAW65062.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Homo sapiens]
Length = 641
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 94 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 153
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD+++
Sbjct: 154 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLR 195
>gi|395516347|ref|XP_003762351.1| PREDICTED: semaphorin-3B [Sarcophilus harrisii]
Length = 1015
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVE-FINCGKAVYSRVA 58
R L+TEQ+DS LN P FV S D +YFFFRE AVE G+ SR+
Sbjct: 452 RPNLRTEQHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFREVAVEGNPGLGRVSVSRIG 511
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG 89
++C+ D GG N+WT+FLK+RL CSVPG
Sbjct: 512 QICRNDIGGQRSLVNKWTTFLKARLVCSVPG 542
>gi|327273399|ref|XP_003221468.1| PREDICTED: semaphorin-3E-like [Anolis carolinensis]
Length = 751
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FVSS + + VYFFF E A+E A+YSRV R+C
Sbjct: 187 IRTEPDDDRLLKEPKFVSSFLIPDNEDQEDNKVYFFFTEKALEAETGAHAIYSRVGRMCA 246
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+WT+FLK+RL CSVPG YFDE++
Sbjct: 247 NDMGGQRMLVNKWTTFLKTRLICSVPGMNGIDTYFDELE 285
>gi|157265863|gb|ABV26010.1| semaphorin 3E [Danio rerio]
Length = 720
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D LN P FV S D VY+FF E + KAVY+RVARVC
Sbjct: 161 IRTEVGDRQQLNEPKFVGSAVIPDNDDPADDKVYYFFTERVADVEGGNKAVYTRVARVCA 220
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSV--PGDFPFYFDEIQ 99
D+GG NRW+SFLK+RL CSV P +FDE++
Sbjct: 221 NDQGGQRMLVNRWSSFLKTRLICSVAGPNGIDTHFDELE 259
>gi|32425767|gb|AAH17476.2| SEMA4C protein [Homo sapiens]
Length = 645
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 17/112 (15%)
Query: 3 PIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEFI 47
PII R ++TE Y + LN P+FV S + G F VYFFFRE AVE
Sbjct: 1 PIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESD 59
Query: 48 NCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 60 CYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAP-NWQLYFNQLQ 110
>gi|440909442|gb|ELR59352.1| Semaphorin-4C [Bos grunniens mutus]
Length = 831
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSS----------LTQGDFVYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S D VYFFF E AVE+
Sbjct: 188 EPVILRNMGPHHAMKTE-YLAFWLNEPHFVGSAYVPESVGSYTGDDDKVYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+ +Q
Sbjct: 247 DCYAEQVVARVARVCKGDVGGARTLQRKWTTFLKARLVCSAP-DWQLYFNRLQ 298
>gi|395733782|ref|XP_003776291.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3B, partial [Pongo
abelii]
Length = 692
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 9/101 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRETAVE G+ SRV
Sbjct: 180 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVG 239
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEI 98
++C+ D GG N+WT+FLK+RL CSVPG + +FD++
Sbjct: 240 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQL 280
>gi|300797834|ref|NP_001179552.1| semaphorin-4C precursor [Bos taurus]
gi|296482831|tpg|DAA24946.1| TPA: sema domain, immunoglobulin domain (Ig), transmembrane domain
(TM) and short cytoplasmic domain, (semaphorin) 4C [Bos
taurus]
Length = 833
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSS----------LTQGDFVYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S D VYFFF E AVE+
Sbjct: 188 EPVILRNMGPHHAMKTE-YLAFWLNEPHFVGSAYVPESVGSYTGDDDKVYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF+ +Q
Sbjct: 247 DCYAEQVVARVARVCKGDVGGARTLQRKWTTFLKARLVCSAP-DWQLYFNRLQ 298
>gi|148226863|ref|NP_001079948.1| uncharacterized protein LOC379639 precursor [Xenopus laevis]
gi|34784601|gb|AAH57717.1| MGC68870 protein [Xenopus laevis]
Length = 695
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
++ P++TEQYDS LN P FV SL + D +Y FRE ++E N G AV SR+A
Sbjct: 204 HKPPIRTEQYDSRWLNDPLFVGSLVVSESSFKEDDKLYILFRERSLEGEN-GPAVLSRIA 262
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG 89
RVC D GG +WTS+LK+RL CSV G
Sbjct: 263 RVCLNDEGGLRSLVGKWTSYLKARLVCSVIG 293
>gi|327285262|ref|XP_003227353.1| PREDICTED: semaphorin-3G-like [Anolis carolinensis]
Length = 777
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
+R L+TE D LNAP FV++ D VYFFF E A E + G+A++SRV
Sbjct: 217 HRSSLRTEM-DQRLLNAPKFVAAYLIPDNDDRDNDKVYFFFTEKAAESESKGRAIFSRVG 275
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
R+C D GG N+W++F K+RL CSVPG YFDE++
Sbjct: 276 RICANDAGGQRVLVNKWSTFNKARLVCSVPGPDGIDTYFDELE 318
>gi|113682328|ref|NP_001038549.1| semaphorin-3E precursor [Danio rerio]
Length = 768
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D LN P FV S D VY+FF E + KAVY+RVARVC
Sbjct: 209 IRTEVGDRQQLNEPKFVGSAVIPDNDDPADDKVYYFFTERVADVEGGNKAVYTRVARVCA 268
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSV--PGDFPFYFDEIQ 99
D+GG NRW+SFLK+RL CSV P +FDE++
Sbjct: 269 NDQGGQRMLVNRWSSFLKTRLICSVAGPNGIDTHFDELE 307
>gi|440909024|gb|ELR58983.1| Semaphorin-3B [Bos grunniens mutus]
Length = 749
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P F+ S D +YFFFRE+AVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFIKVFWIPESENPDDDKIYFFFRESAVEATPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGDTNFDQLQ 308
>gi|196000596|ref|XP_002110166.1| hypothetical protein TRIADDRAFT_53879 [Trichoplax adhaerens]
gi|190588290|gb|EDV28332.1| hypothetical protein TRIADDRAFT_53879 [Trichoplax adhaerens]
Length = 1192
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 20 LNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHR-FRNRWTSF 78
LN P++V+ ++ ++FFFRE A E K ++SRV+R+CK D+G P+ R+ TSF
Sbjct: 152 LNDPHYVAEISLPGEIFFFFREHATEAETVEKMIFSRVSRICKNDQGAPNAGLRHMMTSF 211
Query: 79 LKSRLNCSVPGDFPFYFD 96
K+RL+CS+PG +P+YF+
Sbjct: 212 QKARLDCSLPGQYPYYFN 229
>gi|329664660|ref|NP_001192676.1| semaphorin-3B precursor [Bos taurus]
gi|296474902|tpg|DAA17017.1| TPA: sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Bos taurus]
Length = 748
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P F+ S D +YFFFRE+AVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFIKVFWIPESENPDDDKIYFFFRESAVEATPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGDTNFDQLQ 308
>gi|189217624|ref|NP_001121263.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F precursor [Xenopus laevis]
gi|115528243|gb|AAI24870.1| LOC100158345 protein [Xenopus laevis]
Length = 695
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
++ P++TEQYDS LN P FV SL + D +Y FRE ++E N G AV SR+A
Sbjct: 204 HKPPIRTEQYDSRWLNDPLFVGSLVVSESSFKEDDKLYILFRERSLEGEN-GPAVLSRIA 262
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG 89
RVC D GG +WTS+LK+RL CSV G
Sbjct: 263 RVCLNDEGGLRSLVGKWTSYLKARLVCSVIG 293
>gi|444517419|gb|ELV11542.1| Semaphorin-4C [Tupaia chinensis]
Length = 633
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F +YFFF E AVE+
Sbjct: 188 EPVILRNMGPHHAMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKIYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVAR+CK D GG + +WT+FLK+RL CS P D+ YF+++Q
Sbjct: 247 DCYAEQVVARVARICKGDVGGARTLQRKWTTFLKARLVCSAP-DWQLYFNQLQ 298
>gi|194041210|ref|XP_001927890.1| PREDICTED: semaphorin-3B [Sus scrofa]
Length = 747
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE+AVE G+ SRV
Sbjct: 207 RPSLRTEAHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEATPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG 89
++C+ D GG N+WT+FLK+RL CSVPG
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPG 297
>gi|344276695|ref|XP_003410143.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3B-like [Loxodonta
africana]
Length = 748
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE AVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRELAVEAAPALGRLSVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + +FD++Q
Sbjct: 267 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQ 308
>gi|345314366|ref|XP_001510220.2| PREDICTED: semaphorin-4A-like, partial [Ornithorhynchus anatinus]
Length = 574
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R PL+T+ + F +S + G F+YF F ETA EF SR
Sbjct: 87 EPILLRSLGTQPPLKTDNFLLWLQPDAAFAASFSNGSFIYFLFSETASEFHFFEPLTVSR 146
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFP 92
VARVC+ D+GG + +WT+FLK+ L C VPG P
Sbjct: 147 VARVCQNDKGGEKLLQKKWTTFLKAPLTCKVPGQLP 182
>gi|194220400|ref|XP_001916376.1| PREDICTED: semaphorin-4C [Equus caballus]
Length = 647
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F VYFFF E AVE+
Sbjct: 188 EPVILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D YF+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLVCSAP-DRQLYFNQLQ 298
>gi|165993283|emb|CAP71953.1| sema3h [Danio rerio]
Length = 686
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/103 (44%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R ++TEQYDS L FV S + D VY FF E A E GK +YSRVA
Sbjct: 200 RHVIRTEQYDSTWLQGAEFVHVTAMSESDNEEDDKVYVFFTERAQEAEGAAGKVLYSRVA 259
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
RVCK D GG N+W++F K+R+ CSVPG +FD++Q
Sbjct: 260 RVCKNDIGGQRSLVNKWSTFQKARIVCSVPGPDGIQTHFDKLQ 302
>gi|426227497|ref|XP_004007854.1| PREDICTED: semaphorin-3E [Ovis aries]
Length = 715
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 152 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTRVGRLCV 211
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W+SFLK+RL CSVPG YFDE++
Sbjct: 212 NDMGGQRILVNKWSSFLKARLVCSVPGMNGIDTYFDELE 250
>gi|212286080|ref|NP_001131042.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C precursor
[Xenopus laevis]
gi|50415520|gb|AAH78116.1| Sema4c protein [Xenopus laevis]
Length = 834
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 14/101 (13%)
Query: 2 DPIIYR----EPLQTEQYDSMSLNAPNFVSS----------LTQGDFVYFFFRETAVEFI 47
+P+I R L +Y + LN PNFVSS + D +YFFF E A+E+
Sbjct: 184 EPVIQRIVGQHNLMKTEYLASWLNEPNFVSSAHIPESVGSEIGDDDKIYFFFTERALEYD 243
Query: 48 NCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
+ V SRVAR+CK D GG + +WTSFLK+RL CS+P
Sbjct: 244 CQSEQVVSRVARICKGDLGGARTLQRKWTSFLKARLLCSIP 284
>gi|61097898|ref|NP_571125.1| semaphorin 3h precursor [Danio rerio]
gi|57547716|gb|AAW52551.1| Sema3H [Danio rerio]
Length = 748
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/103 (44%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R ++TEQYDS L FV S + D VY FF E A E GK +YSRVA
Sbjct: 200 RHVIRTEQYDSTWLQGAEFVHVTAMSESDNEEDDKVYVFFTERAQEAEGAAGKVLYSRVA 259
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
RVCK D GG N+W++F K+R+ CSVPG +FD++Q
Sbjct: 260 RVCKNDIGGQRSLVNKWSTFQKARIVCSVPGPDGIQTHFDKLQ 302
>gi|190336992|gb|AAI62689.1| Sema3h protein [Danio rerio]
Length = 749
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/103 (44%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R ++TEQYDS L FV S + D VY FF E A E GK +YSRVA
Sbjct: 200 RHVIRTEQYDSTWLQGAEFVHVTAMSESDNEEDDKVYVFFTERAQEAEGAAGKVLYSRVA 259
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
RVCK D GG N+W++F K+R+ CSVPG +FD++Q
Sbjct: 260 RVCKNDIGGQRSLVNKWSTFQKARIVCSVPGPDGIQTHFDKLQ 302
>gi|426249509|ref|XP_004018492.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3B [Ovis aries]
Length = 747
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P F+ S D +YFFFRE+AVE G+ SRV
Sbjct: 206 RPSLRTEPHDSRWLNEPKFIKVFWIPESENPDDDKIYFFFRESAVEATPALGRLSVSRVG 265
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CSVPG + FD++Q
Sbjct: 266 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGDTNFDQLQ 307
>gi|73960914|ref|XP_547538.2| PREDICTED: semaphorin-4A isoform 1 [Canis lupus familiaris]
Length = 759
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + +FV+++ FVYFFF ETA EF K SR
Sbjct: 204 EPILIRTLGPQPVLKTDNFLRWLQPDASFVAAIPSTHFVYFFFEETASEFEFFEKLHTSR 263
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L CS PG PF
Sbjct: 264 VARVCKNDVGGDKLLQKKWTTFLKAQLLCSQPGQLPF 300
>gi|55742366|ref|NP_001006924.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F precursor [Xenopus (Silurana)
tropicalis]
gi|49903346|gb|AAH76684.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F [Xenopus (Silurana)
tropicalis]
Length = 695
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
Query: 6 YREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVA 58
++ P++TEQYDS LN P FV SL + D +Y FRE ++E N G A+ SR+A
Sbjct: 204 HKPPIRTEQYDSRWLNDPLFVGSLVVSESSFKEDDKLYILFRERSLEGEN-GPALVSRIA 262
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG 89
RVC D GG +WTS+LK+RL CSV G
Sbjct: 263 RVCLNDEGGLRSLVGKWTSYLKARLVCSVIG 293
>gi|355718456|gb|AES06274.1| sema domain, immunoglobulin domain , transmembrane domain and short
cytoplasmic domain, 4A [Mustela putorius furo]
Length = 606
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + +FV+++ FVYFFF ETA EF K SR
Sbjct: 51 EPILIRTLGPQPVLKTDNFLRWLQPDASFVAAIPSTHFVYFFFEETASEFEFFEKLHTSR 110
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L CS PG PF
Sbjct: 111 VARVCKNDVGGDKLLQKKWTTFLKAQLLCSQPGQLPF 147
>gi|327265733|ref|XP_003217662.1| PREDICTED: semaphorin-3B-like [Anolis carolinensis]
Length = 812
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFI-NCGKAVYSRVA 58
R ++TEQ+DS LN P FV S D ++FFFRETAVE GK ++R+
Sbjct: 250 RPSIRTEQHDSRWLNEPKFVDVFWIPESENPDDDKIFFFFRETAVEGSQGLGKQTFARIG 309
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL C+V G YFD+++
Sbjct: 310 QICRNDMGGQRSLVNKWTTFLKARLVCAVQGSDGSDTYFDQLR 352
>gi|348581943|ref|XP_003476736.1| PREDICTED: semaphorin-3B-like [Cavia porcellus]
Length = 751
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFF E AVE G+ SRV
Sbjct: 209 RSSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFHELAVEAAPVLGRLTVSRVG 268
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CS+PG + +FD++Q
Sbjct: 269 QICRNDMGGQRSLVNKWTTFLKARLVCSIPGVEGDTHFDQLQ 310
>gi|432092429|gb|ELK25044.1| Semaphorin-3B [Myotis davidii]
Length = 965
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 9/101 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFFRE+AVE G+ SR+
Sbjct: 199 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRESAVEASQALGRRSVSRIG 258
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEI 98
++C+ D GG N+WT+FLK+RL CSVPG + +FD++
Sbjct: 259 QICRNDVGGQRSLVNKWTTFLKARLVCSVPGTEGDTHFDQL 299
>gi|301783139|ref|XP_002926984.1| PREDICTED: semaphorin-4A-like [Ailuropoda melanoleuca]
Length = 758
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + +FV+++ FVYFFF ETA EF K SR
Sbjct: 202 EPILIRTLGPQPVLKTDNFLRWLQPDASFVAAIPSTQFVYFFFEETASEFEFFEKLHTSR 261
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 262 VARVCKNDVGGDKLLQKKWTTFLKAQLLCTQPGQLPF 298
>gi|344306759|ref|XP_003422052.1| PREDICTED: semaphorin-4C [Loxodonta africana]
Length = 833
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F +YFFF E AVE+
Sbjct: 188 EPVILRNMGPHYSMKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKIYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ +F+++Q
Sbjct: 247 DCYAEQVVARVARVCKGDLGGARTLQRKWTTFLKARLVCSAP-DWQLHFNQLQ 298
>gi|335295561|ref|XP_003130268.2| PREDICTED: semaphorin-3E [Sus scrofa]
Length = 715
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+YSRV R+C
Sbjct: 152 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYSRVGRICV 211
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 212 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 250
>gi|311268931|ref|XP_001925178.2| PREDICTED: semaphorin-3F [Sus scrofa]
Length = 785
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPGD +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGDDGIETHFDELQ 340
>gi|186659517|ref|NP_001119519.1| semaphorin-4C precursor [Mus musculus]
gi|8134699|sp|Q64151.1|SEM4C_MOUSE RecName: Full=Semaphorin-4C; AltName: Full=M-Sema F; AltName:
Full=Semaphorin-C-like 1; Short=Sema I; Short=Semaphorin
I; Flags: Precursor
gi|1110599|gb|AAB35184.1| semaphorin homolog [Mus sp.]
gi|148682547|gb|EDL14494.1| mCG17761, isoform CRA_a [Mus musculus]
Length = 834
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F +YFFF E AVE+
Sbjct: 188 EPVILRYMGTHHSIKTE-YLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEY 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF++++
Sbjct: 247 DCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAP-DWKVYFNQLK 298
>gi|344270786|ref|XP_003407223.1| PREDICTED: semaphorin-3E [Loxodonta africana]
Length = 775
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 212 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+WT+FLK+RL CSVPG YFDE++
Sbjct: 272 NDVGGQRILVNKWTTFLKARLVCSVPGMNGIDTYFDELE 310
>gi|160773680|gb|AAI55169.1| Sema4e protein [Danio rerio]
Length = 766
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 14/100 (14%)
Query: 2 DPIIYR---EPLQTEQYDSMSLNAPNFV--SSLTQG--------DFVYFFFRETAVEFIN 48
+P++ R E ++TE + S L+ PNF+ + + +G D +Y FF ETAVE+ +
Sbjct: 190 EPVMMRSTEESIRTE-FTSTWLSEPNFIHMAHIPEGQSNPDGDDDKIYLFFSETAVEYES 248
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
K SRVARVCK D GG + +WTSFLK+RL+C VP
Sbjct: 249 YTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCQVP 288
>gi|301605938|ref|XP_002932614.1| PREDICTED: semaphorin-4C-like [Xenopus (Silurana) tropicalis]
Length = 599
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 14/101 (13%)
Query: 2 DPIIYR----EPLQTEQYDSMSLNAPNFVSS----------LTQGDFVYFFFRETAVEFI 47
+P+I R + +Y + LN PNFVSS + D +Y+FF E A+E+
Sbjct: 270 EPVIMRIVGQHNIMKTEYLASWLNEPNFVSSAHMPESVGSEIGDDDKIYYFFTERALEYD 329
Query: 48 NCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
+ V SRVAR+CK D GG + +WTSFLK+RL CS+P
Sbjct: 330 CSSEQVVSRVARICKGDLGGARTLQRKWTSFLKARLLCSIP 370
>gi|358411773|ref|XP_003582119.1| PREDICTED: semaphorin-3E-like [Bos taurus]
gi|359064625|ref|XP_003586003.1| PREDICTED: semaphorin-3E-like [Bos taurus]
Length = 715
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 152 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTRVGRLCV 211
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 212 NDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 250
>gi|281342891|gb|EFB18475.1| hypothetical protein PANDA_016687 [Ailuropoda melanoleuca]
Length = 722
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + +FV+++ FVYFFF ETA EF K SR
Sbjct: 166 EPILIRTLGPQPVLKTDNFLRWLQPDASFVAAIPSTQFVYFFFEETASEFEFFEKLHTSR 225
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 226 VARVCKNDVGGDKLLQKKWTTFLKAQLLCTQPGQLPF 262
>gi|410899200|ref|XP_003963085.1| PREDICTED: semaphorin-3ab-like [Takifugu rubripes]
Length = 773
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/103 (44%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R ++TEQYDS L FV + + D VY FF E A E GK +YSRVA
Sbjct: 203 RRVIRTEQYDSTWLLDAQFVRVAPLSETDNPEDDKVYVFFTERAQEAEGAAGKVLYSRVA 262
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
RVCK D GG N+W++F K+RL CSVPG +FD++Q
Sbjct: 263 RVCKNDIGGQRSLVNKWSTFQKARLECSVPGPDGLHTHFDQLQ 305
>gi|148682548|gb|EDL14495.1| mCG17761, isoform CRA_b [Mus musculus]
Length = 914
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F +YFFF E AVE+
Sbjct: 268 EPVILRYMGTHHSIKTE-YLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEY 326
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF++++
Sbjct: 327 DCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAP-DWKVYFNQLK 378
>gi|440910561|gb|ELR60349.1| Semaphorin-3E, partial [Bos grunniens mutus]
Length = 737
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 174 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTRVGRLCV 233
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 234 NDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 272
>gi|18859351|ref|NP_571124.1| semaphorin-4E isoform 1 precursor [Danio rerio]
gi|8134727|sp|Q9YHX4.1|SEM4E_DANRE RecName: Full=Semaphorin-4E; AltName: Full=Semaphorin-7; AltName:
Full=Semaphorin-Z7; Short=Sema Z7; Flags: Precursor
gi|3851536|gb|AAC72345.1| transmembrane class IV semaphorin [Danio rerio]
gi|94732888|emb|CAK04899.1| semaphorin 4e [Danio rerio]
Length = 766
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 14/100 (14%)
Query: 2 DPIIYR---EPLQTEQYDSMSLNAPNFV--SSLTQG--------DFVYFFFRETAVEFIN 48
+P++ R E ++TE + S L+ PNF+ + + +G D +Y FF ETAVE+ +
Sbjct: 190 EPVMMRSTEESIRTE-FTSTWLSEPNFIHMAHIPEGQSNPDGDDDKIYLFFSETAVEYES 248
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
K SRVARVCK D GG + +WTSFLK+RL+C VP
Sbjct: 249 YTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCQVP 288
>gi|432865867|ref|XP_004070653.1| PREDICTED: semaphorin-3ab-like [Oryzias latipes]
Length = 759
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R ++TEQYDS L FV + + D VY FF E A E GK +YSRVA
Sbjct: 203 RHVIRTEQYDSTWLQDAQFVRVAPLSETDNPEDDKVYVFFTERAQEAEGAAGKVLYSRVA 262
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
RVCK D GG N+W++F K+R+ CSVPG +FD++Q
Sbjct: 263 RVCKNDIGGQRSLVNKWSTFQKARMVCSVPGPDGLQTHFDQLQ 305
>gi|327265771|ref|XP_003217681.1| PREDICTED: semaphorin-3D-like [Anolis carolinensis]
Length = 919
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKA-VYSRVARVC 61
++TEQ L P FV + D VYFFFRETAVE K +Y+RVARVC
Sbjct: 323 IRTEQNQDYWLKEPVFVGAYAIPDTYNHDDDKVYFFFRETAVEAGQWEKRRIYARVARVC 382
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
K D GG H NRW++FLK+RL CS+P +FD+++
Sbjct: 383 KNDVGGKHSLINRWSTFLKARLVCSIPSLHGTETHFDQLE 422
>gi|50417869|gb|AAH78280.1| Sema4e protein [Danio rerio]
Length = 762
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 14/100 (14%)
Query: 2 DPIIYR---EPLQTEQYDSMSLNAPNFV--SSLTQG--------DFVYFFFRETAVEFIN 48
+P++ R E ++TE + S L+ PNF+ + + +G D +Y FF ETAVE+ +
Sbjct: 186 EPVMMRSTEESIRTE-FTSTWLSEPNFIHMAHIPEGQSNPDGDDDKIYLFFSETAVEYES 244
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
K SRVARVCK D GG + +WTSFLK+RL+C VP
Sbjct: 245 YTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCQVP 284
>gi|332206514|ref|XP_003252338.1| PREDICTED: semaphorin-3E isoform 2 [Nomascus leucogenys]
Length = 715
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV+S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 152 IRTEHDDERLLKEPKFVASYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCG 211
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 212 NDVGGQRILVNKWSTFLKARLICSVPGMNGIDTYFDELE 250
>gi|348514696|ref|XP_003444876.1| PREDICTED: semaphorin-3ab-like [Oreochromis niloticus]
Length = 747
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R ++TEQYDS L +FV + + D VY FF E A E GK +YSRVA
Sbjct: 187 RRVIRTEQYDSTWLQDAHFVRVAPLSETDNPEDDKVYVFFTERAQEAEGAAGKVLYSRVA 246
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
RVCK D GG N+W++F K+R+ CSVPG +FD++Q
Sbjct: 247 RVCKNDIGGQRSLVNKWSTFQKARMVCSVPGPDGLQTHFDQLQ 289
>gi|332206512|ref|XP_003252337.1| PREDICTED: semaphorin-3E isoform 1 [Nomascus leucogenys]
Length = 775
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV+S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 212 IRTEHDDERLLKEPKFVASYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCG 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 272 NDVGGQRILVNKWSTFLKARLICSVPGMNGIDTYFDELE 310
>gi|444715437|gb|ELW56305.1| Semaphorin-3A [Tupaia chinensis]
Length = 611
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 31 QGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG- 89
+ D VYFFFRE A++ + GKA ++R+ ++CK D GG N+WT+FLK+RL CSVPG
Sbjct: 198 EDDKVYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGP 257
Query: 90 -DFPFYFDEIQ 99
+FDE+Q
Sbjct: 258 NGIDTHFDELQ 268
>gi|327263471|ref|XP_003216543.1| PREDICTED: semaphorin-4D-like, partial [Anolis carolinensis]
Length = 595
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 2 DPIIYREPLQT---EQYDSMSLNAPNFV----------SSLTQGDFVYFFFRETAVEFIN 48
+PII R LQ +Y LN P+FV SS + D VYFFF E +VE+
Sbjct: 47 EPIISRNSLQNPLRTEYAIPWLNEPHFVFSDVIRADPNSSGEEDDKVYFFFTEVSVEYEF 106
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFY 94
GK + R+ARVCK D+GG + +WTS+LK+RL CS+P F+
Sbjct: 107 LGKLMIPRIARVCKGDQGGHRTLQKKWTSYLKARLLCSMPDKNLFF 152
>gi|417404531|gb|JAA49012.1| Putative semaphorin [Desmodus rotundus]
Length = 775
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A++SRV R+C
Sbjct: 212 IRTEHDDERLLKEPKFVGSYMIADNEDRDDNKVYFFFTEKALEAENKAHAIHSRVGRLCL 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 272 NDVGGQRILVNKWSTFLKARLVCSVPGLNGIDTYFDELE 310
>gi|219518233|gb|AAI44339.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
gi|223461601|gb|AAI40707.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
Length = 775
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAV 53
M P+ + ++TE D L P FV S D VYFFF E A+E N A+
Sbjct: 206 MGPLAH---IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAI 262
Query: 54 YSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
Y+RV R+C D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 263 YTRVGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 310
>gi|119914707|ref|XP_609627.3| PREDICTED: semaphorin-3F isoform 1 [Bos taurus]
gi|297488665|ref|XP_002697079.1| PREDICTED: semaphorin-3F [Bos taurus]
gi|296474903|tpg|DAA17018.1| TPA: sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3 F-like [Bos taurus]
gi|440909020|gb|ELR58979.1| Semaphorin-3F [Bos grunniens mutus]
Length = 792
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE ++E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSIEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|301611561|ref|XP_002935302.1| PREDICTED: semaphorin-3E-like [Xenopus (Silurana) tropicalis]
Length = 778
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 9 PLQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVC 61
P++TE D L P FV S D +YFF+ E A+E +A+YSRV RVC
Sbjct: 214 PIRTEHDDDRILTEPKFVGSYMIPDNEDKDDNKMYFFYTEKAIEGDKGVQAIYSRVGRVC 273
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+WT+FLK+RL CSVPG +FDE++
Sbjct: 274 ANDIGGQRMMVNKWTTFLKTRLICSVPGPNGIDTFFDELE 313
>gi|194386258|dbj|BAG59693.1| unnamed protein product [Homo sapiens]
Length = 766
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAV 53
M P+ + ++TE D L P FV S D VYFFF E A+E N A+
Sbjct: 206 MGPLAH---IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAI 262
Query: 54 YSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
Y+RV R+C D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 263 YTRVGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 310
>gi|426249513|ref|XP_004018494.1| PREDICTED: semaphorin-3F [Ovis aries]
Length = 792
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE ++E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSIEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|410952172|ref|XP_003982757.1| PREDICTED: semaphorin-3E [Felis catus]
Length = 715
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 152 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTRVGRLCV 211
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 212 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 250
>gi|390475159|ref|XP_002758275.2| PREDICTED: semaphorin-3F [Callithrix jacchus]
Length = 766
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ SS D +YFFFRE + E AVY+R+ R+C
Sbjct: 242 MRTDQYNSRWLNDPSFIHAELIPDSSERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 300
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 301 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 339
>gi|119591732|gb|EAW71326.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C, isoform
CRA_b [Homo sapiens]
Length = 794
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 2 DPIIYREPLQTEQYDSMSLNAPNFVSSLT-QGDFVYFFFRETAVEFINCGKAVYSRVARV 60
DP L E + S P V S T D VYFFFRE AVE + V +RVARV
Sbjct: 162 DPAKGHAGLLVEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARV 221
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
CK D GG + +WT+FLK+RL CS P ++ YF+++Q
Sbjct: 222 CKGDMGGARTLQRKWTTFLKARLACSAP-NWQLYFNQLQ 259
>gi|410986756|ref|XP_003999675.1| PREDICTED: semaphorin-4A [Felis catus]
Length = 760
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + +FV+++ FVYFFF ETA EF K SR
Sbjct: 204 EPILIRTLGPQPVLKTDNFLRWLQPDASFVAAIPSTHFVYFFFEETASEFEFFEKLHTSR 263
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 264 VARVCKNDVGGDKLLQKKWTTFLKAQLLCAQPGQLPF 300
>gi|403291207|ref|XP_003936690.1| PREDICTED: semaphorin-3F [Saimiri boliviensis boliviensis]
Length = 785
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ SS D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSSERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|348571927|ref|XP_003471746.1| PREDICTED: semaphorin-4C-like [Cavia porcellus]
Length = 831
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 15/112 (13%)
Query: 2 DPIIYRE--PLQT--EQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEFI 47
+P+I R P T +Y + LN P+FV S + G F +YFFF E AVE+
Sbjct: 188 EPVILRNMGPHHTMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKIYFFFSERAVEYD 247
Query: 48 NCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF++++
Sbjct: 248 CYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLVCSAP-NWQLYFNQLR 298
>gi|345782828|ref|XP_540506.3| PREDICTED: semaphorin-3E, partial [Canis lupus familiaris]
Length = 776
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 243 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTRVGRLCV 302
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 303 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 341
>gi|351711910|gb|EHB14829.1| Semaphorin-3B [Heterocephalus glaber]
Length = 751
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINC-GKAVYSRVA 58
R L+TE +DS LN P FV S D +YFFF E AVE G+ SRV
Sbjct: 207 RPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFHELAVEAAPVLGRLTVSRVG 266
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG-DFPFYFDEIQ 99
++C+ D GG N+WT+FLK+RL CS+PG + +FD++Q
Sbjct: 267 QICRNDMGGQRSLVNKWTTFLKARLVCSMPGVEGDSHFDQLQ 308
>gi|351711906|gb|EHB14825.1| Semaphorin-3F [Heterocephalus glaber]
Length = 845
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 241 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAETAQ-SPAVYARIGRICL 299
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 300 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 338
>gi|332206565|ref|XP_003252365.1| PREDICTED: semaphorin-3D [Nomascus leucogenys]
Length = 777
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+ + LN F+ + + D +YFFFRE++ E K + SRV RVCK
Sbjct: 228 IRTDISEHYWLNGAKFIGTFSIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCK 287
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+WT+FLK+RL CS+PG+ YFDE+Q
Sbjct: 288 NDVGGQRSLINKWTTFLKARLICSIPGNDGADTYFDELQ 326
>gi|296229154|ref|XP_002760138.1| PREDICTED: semaphorin-4A [Callithrix jacchus]
Length = 761
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + +FV+++ FVYFFF ETA EF + SR
Sbjct: 205 EPILMRTLGSQPVLKTDTFLRWLHPDASFVAAIPSTQFVYFFFEETASEFDFFERLHTSR 264
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 265 VARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPF 301
>gi|301770333|ref|XP_002920574.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3F-like [Ailuropoda
melanoleuca]
Length = 785
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 244 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAAQ-SPAVYARIGRICL 302
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 303 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 341
>gi|348581936|ref|XP_003476733.1| PREDICTED: semaphorin-3F-like isoform 2 [Cavia porcellus]
Length = 754
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIRAELIPDSAERNDDKLYFFFRERSAETAQ-SPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|1061351|gb|AAB18276.1| semaphorin III family homolog [Homo sapiens]
Length = 753
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 9/98 (9%)
Query: 10 LQTEQYDSMSLNAPNFV------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKY 63
++T+QY+S LN P+F+ S D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAENDDKLYFFFRERSAEAPQ-SPAVYARIGRICLN 270
Query: 64 DRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 DDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 308
>gi|348581934|ref|XP_003476732.1| PREDICTED: semaphorin-3F-like isoform 1 [Cavia porcellus]
Length = 785
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIRAELIPDSAERNDDKLYFFFRERSAETAQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|444510614|gb|ELV09636.1| Semaphorin-3F [Tupaia chinensis]
Length = 1311
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 870 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 928
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 929 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 967
>gi|431839066|gb|ELK00994.1| Semaphorin-3E [Pteropus alecto]
Length = 775
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDF-------VYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 212 IRTEHDDERLLKEPKFVGSYMIPDNEDQDDNKVYFFFTEKALEAENNAHAIYTRVGRLCL 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 272 NDVGGQRILVNKWSTFLKARLVCSVPGLNGIDTYFDELE 310
>gi|41472949|gb|AAS07488.1| unknown [Homo sapiens]
Length = 591
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 28 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 87
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 88 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 126
>gi|6912650|ref|NP_036563.1| semaphorin-3E isoform 1 precursor [Homo sapiens]
gi|8134690|sp|O15041.1|SEM3E_HUMAN RecName: Full=Semaphorin-3E; Flags: Precursor
gi|51094941|gb|EAL24186.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
gi|119597389|gb|EAW76983.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
gi|156230170|gb|AAI52459.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
gi|168267302|dbj|BAG09707.1| semaphorin-3E precursor [synthetic construct]
Length = 775
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 212 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 272 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 310
>gi|40788215|dbj|BAA20789.2| KIAA0331 [Homo sapiens]
Length = 814
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 251 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 310
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 311 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 349
>gi|332866249|ref|XP_527803.3| PREDICTED: semaphorin-3E isoform 2 [Pan troglodytes]
Length = 775
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 212 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 272 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 310
>gi|149728886|ref|XP_001496563.1| PREDICTED: semaphorin-3F [Equus caballus]
Length = 785
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNEPSFIHAELVPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|426356744|ref|XP_004045715.1| PREDICTED: semaphorin-3E, partial [Gorilla gorilla gorilla]
Length = 800
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 251 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 310
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 311 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 349
>gi|397504408|ref|XP_003822788.1| PREDICTED: semaphorin-3E [Pan paniscus]
Length = 775
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 212 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 272 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 310
>gi|432866623|ref|XP_004070895.1| PREDICTED: semaphorin-3F-like [Oryzias latipes]
Length = 736
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 7 REPLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGK-AVYSRVA 58
R ++TEQYDS LN P F+ S+ D +YFFFRE +++ V +RV
Sbjct: 202 RAAIRTEQYDSRWLNEPVFIQIQQIPDSAEKNDDKLYFFFREKSLDSTGGASPTVLARVG 261
Query: 59 RVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
RVC D GG NRWT+FLK+RL CSV GD FDE++
Sbjct: 262 RVCMNDEGGQKSLVNRWTTFLKARLICSVIGDDGVETRFDELR 304
>gi|296011008|ref|NP_001171600.1| semaphorin-3E isoform 2 [Homo sapiens]
gi|194384160|dbj|BAG64853.1| unnamed protein product [Homo sapiens]
Length = 715
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 152 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 211
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 212 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 250
>gi|297681160|ref|XP_002818334.1| PREDICTED: semaphorin-3D [Pongo abelii]
Length = 777
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+ + LN F+ + + D +YFFFRE++ E K + SRV RVCK
Sbjct: 228 IRTDISEHYWLNGAKFIGTFSIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCK 287
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+WT+FLK+RL CS+PG YFDE+Q
Sbjct: 288 NDVGGQRSLINKWTTFLKARLICSIPGSDGADTYFDELQ 326
>gi|332866251|ref|XP_003318607.1| PREDICTED: semaphorin-3E isoform 1 [Pan troglodytes]
Length = 715
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 152 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 211
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 212 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 250
>gi|345327803|ref|XP_001506080.2| PREDICTED: semaphorin-3E [Ornithorhynchus anatinus]
Length = 751
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE + L P FV+S D VYFFF E A+E N A+YSRV RVC
Sbjct: 188 IRTEPDNERQLKEPKFVASHMIPDNEDRDDNKVYFFFTEKALESENSAHAIYSRVGRVCV 247
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG +FDE++
Sbjct: 248 NDMGGQRILVNKWSTFLKTRLVCSVPGLNGIDTHFDELE 286
>gi|395856477|ref|XP_003800655.1| PREDICTED: semaphorin-3F [Otolemur garnettii]
Length = 786
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 244 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 302
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 303 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 341
>gi|355751509|gb|EHH55764.1| hypothetical protein EGM_05031 [Macaca fascicularis]
Length = 833
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 16/102 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSS---------LT-QGDFVYFFFRETAVEF 46
+PII R ++TE Y + LN P+FV S LT D VYFFFRE AVE
Sbjct: 188 EPIILRNMGPHHSMKTE-YLAFWLNEPHFVGSAYVPESVGSLTGDDDKVYFFFRERAVES 246
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
+ V +RVARVCK D GG + +WT+FLK+RL CS P
Sbjct: 247 DCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAP 288
>gi|344276703|ref|XP_003410147.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3F-like [Loxodonta
africana]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|444715438|gb|ELW56306.1| Semaphorin-3E [Tupaia chinensis]
Length = 745
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 182 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 241
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 242 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELE 280
>gi|397496102|ref|XP_003818882.1| PREDICTED: semaphorin-3F isoform 1 [Pan paniscus]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|354476489|ref|XP_003500457.1| PREDICTED: semaphorin-3F isoform 2 [Cricetulus griseus]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|354476487|ref|XP_003500456.1| PREDICTED: semaphorin-3F isoform 1 [Cricetulus griseus]
gi|344252810|gb|EGW08914.1| Semaphorin-3F [Cricetulus griseus]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|109039541|ref|XP_001103281.1| PREDICTED: semaphorin-3F isoform 1 [Macaca mulatta]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|3377766|gb|AAC28108.1| semaphorin IV isoform b [Mus musculus]
gi|148689276|gb|EDL21223.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3 F, isoform CRA_b [Mus musculus]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|426340609|ref|XP_004034221.1| PREDICTED: semaphorin-3F isoform 2 [Gorilla gorilla gorilla]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|426340607|ref|XP_004034220.1| PREDICTED: semaphorin-3F isoform 1 [Gorilla gorilla gorilla]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|410951227|ref|XP_003982300.1| PREDICTED: semaphorin-3F isoform 1 [Felis catus]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|402860051|ref|XP_003894449.1| PREDICTED: semaphorin-3F isoform 1 [Papio anubis]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|57101622|ref|XP_541879.1| PREDICTED: semaphorin-3F [Canis lupus familiaris]
Length = 786
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|27552839|gb|AAH42914.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F [Homo sapiens]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|188497703|ref|NP_004177.3| semaphorin-3F precursor [Homo sapiens]
gi|8134696|sp|Q13275.2|SEM3F_HUMAN RecName: Full=Semaphorin-3F; AltName: Full=Sema III/F; AltName:
Full=Semaphorin IV; Short=Sema IV; Flags: Precursor
gi|1669373|gb|AAB46344.1| semaphorin IV [Homo sapiens]
gi|119585448|gb|EAW65044.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F, isoform CRA_b [Homo sapiens]
gi|119585450|gb|EAW65046.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F, isoform CRA_b [Homo sapiens]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|311254129|ref|XP_003125753.1| PREDICTED: semaphorin-4A-like [Sus scrofa]
Length = 756
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + + +FV+++ VYFFF ETA EF K SR
Sbjct: 234 EPILMRTLGSQPVLKTDNFLRWLQSDASFVAAIPSTQVVYFFFEETASEFEFFEKLHTSR 293
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 294 VARVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQLPF 330
>gi|410222686|gb|JAA08562.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F [Pan troglodytes]
gi|410262900|gb|JAA19416.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F [Pan troglodytes]
gi|410303098|gb|JAA30149.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F [Pan troglodytes]
gi|410303100|gb|JAA30150.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F [Pan troglodytes]
gi|410342665|gb|JAA40279.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F [Pan troglodytes]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|109039548|ref|XP_001103599.1| PREDICTED: semaphorin-3F isoform 5 [Macaca mulatta]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|31543683|ref|NP_035479.2| semaphorin-3F precursor [Mus musculus]
gi|26343595|dbj|BAC35454.1| unnamed protein product [Mus musculus]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|1000207|gb|AAC50568.1| semaphorin [Homo sapiens]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|3377768|gb|AAC28109.1| semaphorin IV isoform a [Mus musculus]
gi|15012136|gb|AAH10976.1| Sema3f protein [Mus musculus]
gi|148689274|gb|EDL21221.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3 F, isoform CRA_a [Mus musculus]
gi|148689275|gb|EDL21222.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3 F, isoform CRA_a [Mus musculus]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|62088098|dbj|BAD92496.1| semaphorin 3F variant [Homo sapiens]
Length = 750
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 208 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 266
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 267 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 305
>gi|341942018|sp|O88632.2|SEM3F_MOUSE RecName: Full=Semaphorin-3F; AltName: Full=Semaphorin IV;
Short=Sema IV; Flags: Precursor
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|410951229|ref|XP_003982301.1| PREDICTED: semaphorin-3F isoform 2 [Felis catus]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|397496104|ref|XP_003818883.1| PREDICTED: semaphorin-3F isoform 2 [Pan paniscus]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|355559618|gb|EHH16346.1| hypothetical protein EGK_11616 [Macaca mulatta]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|149018578|gb|EDL77219.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3 F (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|403293749|ref|XP_003937874.1| PREDICTED: semaphorin-4A isoform 1 [Saimiri boliviensis
boliviensis]
gi|403293751|ref|XP_003937875.1| PREDICTED: semaphorin-4A isoform 2 [Saimiri boliviensis
boliviensis]
Length = 761
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/69 (50%), Positives = 45/69 (65%)
Query: 25 FVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLN 84
FV+++ FVYFFF ETA EF + SRVARVCK D GG + +WT+FLK++L
Sbjct: 233 FVAAIPSTQFVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLL 292
Query: 85 CSVPGDFPF 93
C+ PG PF
Sbjct: 293 CTQPGQLPF 301
>gi|190337426|gb|AAI63710.1| Semaphorin 3ga [Danio rerio]
gi|190338530|gb|AAI63715.1| Semaphorin 3ga [Danio rerio]
Length = 749
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 15/113 (13%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFIN- 48
DP I+R +++EQYDS LN P FV SS D +YFFFRE +++
Sbjct: 201 DPGIFRTMGSRPAVRSEQYDSKWLNEPVFVQMKQISDSSEKNDDKLYFFFREKSLDSGGG 260
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
+V +RV RVC D GG N+WT+FLK+RL CSV GD +FDE++
Sbjct: 261 ASPSVLARVGRVCLNDEGGQKSLVNKWTTFLKARLVCSVMGDDGVETFFDELR 313
>gi|119585447|gb|EAW65043.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F, isoform CRA_a [Homo sapiens]
gi|119585449|gb|EAW65045.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F, isoform CRA_a [Homo sapiens]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|355718450|gb|AES06272.1| sema domain, immunoglobulin domain , short basic domain, secreted,
3F [Mustela putorius furo]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|355746692|gb|EHH51306.1| hypothetical protein EGM_10655 [Macaca fascicularis]
Length = 748
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|402860053|ref|XP_003894450.1| PREDICTED: semaphorin-3F isoform 2 [Papio anubis]
Length = 754
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|209863130|ref|NP_001101655.1| semaphorin-3F precursor [Rattus norvegicus]
gi|149018577|gb|EDL77218.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3 F (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 785
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|395733771|ref|XP_002813777.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3F [Pongo abelii]
Length = 777
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 243 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-SPAVYARIGRICL 301
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 302 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 340
>gi|334333741|ref|XP_003341758.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3F-like [Monodelphis
domestica]
Length = 765
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+FV S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 215 MRTDQYNSRWLNDPSFVHAQLIPDSAERNDDKLYFFFREKSTEAPQ-SPAVYARIGRICL 273
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG +FDE+Q
Sbjct: 274 NDDGGHCCLVNKWSTFLKARLICSVPGPDGIETHFDELQ 312
>gi|74196698|dbj|BAE43091.1| unnamed protein product [Mus musculus]
Length = 441
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+F+ S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQ-NPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG+ +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQ 309
>gi|395516249|ref|XP_003762304.1| PREDICTED: semaphorin-3F [Sarcophilus harrisii]
Length = 762
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+FV S+ D +YFFFRE + E AVY+R+ R+C
Sbjct: 212 MRTDQYNSRWLNDPSFVHAQLIPDSAERNDDKLYFFFREKSTEAPQ-SPAVYARIGRICL 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG +FDE+Q
Sbjct: 271 NDDGGHCCLVNKWSTFLKARLICSVPGPDGIETHFDELQ 309
>gi|345308354|ref|XP_001508757.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3F-like [Ornithorhynchus
anatinus]
Length = 947
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 10 LQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+QY+S LN P+FV S+ D +YFFFRE + + AVYSR+ R+C
Sbjct: 402 MRTDQYNSRWLNDPSFVHAQLIPDSAERNDDKLYFFFREKSTDAPQ-SPAVYSRIGRICL 460
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQV 100
D GG N+W++FLK+RL CSVPG +FDE+Q
Sbjct: 461 NDDGGHCCLVNKWSTFLKARLICSVPGPDGIETHFDELQA 500
>gi|395818535|ref|XP_003782680.1| PREDICTED: semaphorin-3D [Otolemur garnettii]
Length = 777
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG+
Sbjct: 258 DKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGNDG 317
Query: 91 FPFYFDEIQ 99
YFDE+Q
Sbjct: 318 ADTYFDELQ 326
>gi|47228359|emb|CAG07754.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1217
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 2 DPIIYREPLQTE-QYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARV 60
DP L E + SM+ + +S+L D VY FF ETAVE K V SRVARV
Sbjct: 140 DPFQRHTSLMAEPTFVSMTQIPESHMSALGDDDKVYLFFSETAVECDCYQKLVVSRVARV 199
Query: 61 CKYDRGGPHRFRNRWTSFLKSRLNCSVPG 89
CK D GG + RWTSF+K+R+ C VPG
Sbjct: 200 CKGDMGGQRTLQKRWTSFMKARVECPVPG 228
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 45/72 (62%)
Query: 17 SMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWT 76
SM+ + +S+L D VY FF ETAVE K V SRVARVCK D GG + RWT
Sbjct: 664 SMTQIPESHMSALGDDDKVYLFFSETAVECDCYHKLVVSRVARVCKGDMGGQRTLQKRWT 723
Query: 77 SFLKSRLNCSVP 88
SF+K+R+ C VP
Sbjct: 724 SFMKARVECPVP 735
>gi|332220704|ref|XP_003259494.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4A [Nomascus leucogenys]
Length = 759
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + + +FV+++ VYFFF ETA EF + SR
Sbjct: 205 EPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDFFERLHTSR 264
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L CS PG PF
Sbjct: 265 VARVCKNDVGGEKLLQKKWTTFLKAQLLCSQPGQLPF 301
>gi|301605936|ref|XP_002932613.1| PREDICTED: semaphorin-4C-like [Xenopus (Silurana) tropicalis]
Length = 772
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 4 IIYREPLQTEQYDSMSLNAPNFVSS----------LTQGDFVYFFFRETAVEFINCGKAV 53
I+ + + +Y + LN PNFVSS + D +Y+FF E A+E+ + V
Sbjct: 128 IVGQHNIMKTEYLASWLNEPNFVSSAHMPESVGSEIGDDDKIYYFFTERALEYDCSSEQV 187
Query: 54 YSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
SRVAR+CK D GG + +WTSFLK+RL CS+P
Sbjct: 188 VSRVARICKGDLGGARTLQRKWTSFLKARLLCSIP 222
>gi|355560863|gb|EHH17549.1| hypothetical protein EGK_13976 [Macaca mulatta]
Length = 744
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E I K + SRV RVCK D GG N+WT+FLK+RL CS+PG
Sbjct: 248 DKIYFFFRESSQEGITSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDG 307
Query: 91 FPFYFDEI 98
YFDE+
Sbjct: 308 ADTYFDEL 315
>gi|449480865|ref|XP_004177238.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3E [Taeniopygia guttata]
Length = 775
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
L+TE + L P FV S + + VYFFF E A+E A+Y+RV RVC
Sbjct: 212 LRTEPDNERLLKEPKFVGSYMIPDNEDHEDNKVYFFFTEKALEAETSTHAIYTRVGRVCA 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+WT+FLK+RL CSVPG +FDE++
Sbjct: 272 NDMGGQRMLVNKWTTFLKTRLVCSVPGRNGIDTHFDELE 310
>gi|351707688|gb|EHB10607.1| Semaphorin-4C [Heterocephalus glaber]
Length = 835
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 17/113 (15%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSSL----TQGDF------VYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S + G F +YFFF E AVE+
Sbjct: 192 EPVILRNMGPHHAIKTE-YLAFWLNEPHFVGSAYVPESVGSFTGDDDKIYFFFSERAVEY 250
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
+ V +RVARVCK D GG + +WT+FLK+RL CS P ++ YF+ ++
Sbjct: 251 DCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLVCSAP-NWQLYFNHLR 302
>gi|403257165|ref|XP_003921201.1| PREDICTED: semaphorin-3D [Saimiri boliviensis boliviensis]
Length = 777
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG
Sbjct: 258 DKIYFFFRESSQEGSTSDKTILSRVGRVCKNDAGGQRSLINKWTTFLKARLICSIPGSDG 317
Query: 91 FPFYFDEIQ 99
YFDE+Q
Sbjct: 318 ADTYFDELQ 326
>gi|126303453|ref|XP_001379915.1| PREDICTED: semaphorin-4C [Monodelphis domestica]
Length = 832
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 19 SLNAPNFVSSLT-QGDFVYFFFRETAVEFINC-GKAVYSRVARVCKYDRGGPHRFRNRWT 76
S P V SLT D +YFFF E AVE+ NC + V +RVARVCK D GG + +WT
Sbjct: 218 SAYVPESVGSLTGDDDKIYFFFSERAVEY-NCYAEQVVARVARVCKGDMGGARTLQKKWT 276
Query: 77 SFLKSRLNCSVPGDFPFYFDEIQ 99
+FLK+RL C+ P D YF+++Q
Sbjct: 277 TFLKARLVCAAP-DRQLYFNQLQ 298
>gi|296209808|ref|XP_002751696.1| PREDICTED: semaphorin-3D [Callithrix jacchus]
Length = 777
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG
Sbjct: 258 DKIYFFFRESSQEGSTSDKTIISRVGRVCKNDAGGQRSLINKWTTFLKARLICSIPGSDG 317
Query: 91 FPFYFDEIQ 99
YFDE+Q
Sbjct: 318 ADTYFDELQ 326
>gi|62414142|ref|NP_001014824.1| semaphorin 3gb precursor [Danio rerio]
gi|57790316|gb|AAW56084.1| semaphorin 3Gb [Danio rerio]
Length = 745
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 15/113 (13%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFIN- 48
DP I+R ++TEQYDS LN P F+ S+ D +YFFFRE +++
Sbjct: 193 DPAIFRTLGDRPAVRTEQYDSRWLNEPVFIKIQKVPDSAEKNDDKLYFFFREKSLDASGG 252
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+V +RV RVC D GG N+WT+FLK+RL CSV G YFDE++
Sbjct: 253 SAPSVLARVGRVCLNDDGGQRSLVNKWTTFLKARLVCSVIGADGVETYFDELR 305
>gi|338723971|ref|XP_001491112.3| PREDICTED: semaphorin-3E [Equus caballus]
Length = 776
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGDF-------VYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E + A+YSRV R+C
Sbjct: 212 IRTEHDDERLLREPKFVGSHMIPDNEDGDDNKVYFFFTEKALEAESNAHAIYSRVGRLCV 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 272 NDVGGQRMLVNKWSTFLKARLVCSVPGMNGIDTYFDELE 310
>gi|193786965|dbj|BAG52288.1| unnamed protein product [Homo sapiens]
Length = 629
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + + +FV+++ VYFFF ETA EF + SR
Sbjct: 73 EPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDFFERLHTSR 132
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 133 VARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPF 169
>gi|190338322|gb|AAI63245.1| Sema3gb protein [Danio rerio]
Length = 746
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 15/113 (13%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFIN- 48
DP I+R ++TEQYDS LN P F+ S+ D +YFFFRE +++
Sbjct: 193 DPAIFRTLGDRPAVRTEQYDSRWLNEPVFIKIQKIPDSAEKNDDKLYFFFREKSLDASGG 252
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
+V +RV RVC D GG N+WT+FLK+RL CSV G YFDE++
Sbjct: 253 SAPSVLARVGRVCLNDDGGQRSLVNKWTTFLKARLVCSVIGADGVETYFDELR 305
>gi|300863076|ref|NP_001180231.1| semaphorin-4A isoform 2 [Homo sapiens]
Length = 629
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + + +FV+++ VYFFF ETA EF + SR
Sbjct: 73 EPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDFFERLHTSR 132
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 133 VARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPF 169
>gi|426332025|ref|XP_004026993.1| PREDICTED: semaphorin-4A isoform 3 [Gorilla gorilla gorilla]
Length = 592
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + + +FV+++ VYFFF ETA EF + SR
Sbjct: 36 EPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDFFERLHTSR 95
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 96 VARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPF 132
>gi|449513850|ref|XP_002190148.2| PREDICTED: semaphorin-4D [Taeniopygia guttata]
Length = 977
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 11/94 (11%)
Query: 5 IYREPLQTEQYDSMSLNAPNFV----------SSLTQGDFVYFFFRETAVEFINCGKAVY 54
++R L+TE Y LN PNFV S+ + D +YFFF E +VE+ GK +
Sbjct: 310 LHRSSLRTE-YAIPWLNEPNFVFADVIRADPNSTDGEDDKIYFFFTEVSVEYEFVGKLLI 368
Query: 55 SRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVP 88
R+ARVCK D+GG + +WTSFLK+RL C++P
Sbjct: 369 PRIARVCKRDQGGLRILQKKWTSFLKARLICTIP 402
>gi|50511079|dbj|BAD32525.1| mKIAA1739 protein [Mus musculus]
Length = 755
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 17/114 (14%)
Query: 2 DPIIYR-----EPLQTEQYDSMSLNAPNFVSS----------LTQGDFVYFFFRETAVEF 46
+P+I R ++TE Y + LN P+FV S D +YFFF E AVE+
Sbjct: 109 EPVILRYMGTHHSIKTE-YLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEY 167
Query: 47 INCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPFYFDEIQV 100
+ V +RVARVCK D GG + +WT+FLK+RL CS P D+ YF++++
Sbjct: 168 DCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAP-DWKVYFNQLKA 220
>gi|109067640|ref|XP_001107897.1| PREDICTED: semaphorin-3D [Macaca mulatta]
gi|355747881|gb|EHH52378.1| hypothetical protein EGM_12809 [Macaca fascicularis]
Length = 777
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG
Sbjct: 258 DKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDG 317
Query: 91 FPFYFDEIQ 99
YFDE+Q
Sbjct: 318 ADTYFDELQ 326
>gi|395532234|ref|XP_003768176.1| PREDICTED: semaphorin-4A [Sarcophilus harrisii]
Length = 757
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + +FV+S+ VYFFF ETA EF K SR
Sbjct: 201 EPILMRTLGTQPVLKTDAFLRWLQPDASFVASIPSTHVVYFFFGETAKEFDFFEKLTISR 260
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 261 VARVCKNDVGGEKLLQKKWTTFLKAQLFCAQPGQLPF 297
>gi|431892312|gb|ELK02752.1| Semaphorin-4A [Pteropus alecto]
Length = 759
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 24 NFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRL 83
+FV+++ VYFFF ETA EF K SRVARVCK D GG + +WT+FLK++L
Sbjct: 229 SFVAAIPSTQVVYFFFEETASEFEFFDKLRTSRVARVCKNDVGGERLLQRKWTTFLKAQL 288
Query: 84 NCSVPGDFPF 93
C+ PG PF
Sbjct: 289 LCTEPGQLPF 298
>gi|41406086|ref|NP_689967.2| semaphorin-3D precursor [Homo sapiens]
gi|8134693|sp|O95025.2|SEM3D_HUMAN RecName: Full=Semaphorin-3D; Flags: Precursor
gi|51094939|gb|EAL24184.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3D [Homo sapiens]
Length = 777
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG
Sbjct: 258 DKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDG 317
Query: 91 FPFYFDEIQ 99
YFDE+Q
Sbjct: 318 ADTYFDELQ 326
>gi|426356754|ref|XP_004045719.1| PREDICTED: semaphorin-3D [Gorilla gorilla gorilla]
Length = 760
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+ + LN F+ + D +YFFFRE++ E K + SRV RVCK
Sbjct: 211 IRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCK 270
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+WT+FLK+RL CS+PG YFDE+Q
Sbjct: 271 NDVGGQRSLINKWTTFLKARLICSIPGSDGADTYFDELQ 309
>gi|37182992|gb|AAQ89296.1| Collapsin-2 [Homo sapiens]
Length = 777
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG
Sbjct: 258 DKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDG 317
Query: 91 FPFYFDEIQ 99
YFDE+Q
Sbjct: 318 ADTYFDELQ 326
>gi|114614272|ref|XP_527805.2| PREDICTED: semaphorin-3D [Pan troglodytes]
gi|397504401|ref|XP_003822786.1| PREDICTED: semaphorin-3D [Pan paniscus]
Length = 777
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG
Sbjct: 258 DKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDG 317
Query: 91 FPFYFDEIQ 99
YFDE+Q
Sbjct: 318 ADTYFDELQ 326
>gi|403257156|ref|XP_003921198.1| PREDICTED: semaphorin-3E isoform 1 [Saimiri boliviensis
boliviensis]
Length = 774
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D LN P FV S D VYFFF E A+E + +Y+RV R+C
Sbjct: 212 IRTEHDDERLLNEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAEDNAHTIYARVGRLCV 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 272 NDIGGQRILVNKWSTFLKARLVCSVPGTNRIDTYFDELE 310
>gi|402864347|ref|XP_003896432.1| PREDICTED: semaphorin-3D [Papio anubis]
Length = 777
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG
Sbjct: 258 DKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDG 317
Query: 91 FPFYFDEIQ 99
YFDE+Q
Sbjct: 318 ADTYFDELQ 326
>gi|395539086|ref|XP_003771504.1| PREDICTED: semaphorin-3E, partial [Sarcophilus harrisii]
Length = 736
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N +Y+RV RVC
Sbjct: 173 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALESENNAHTIYTRVGRVCA 232
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG +FDE++
Sbjct: 233 NDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTHFDELE 271
>gi|297288983|ref|XP_002803437.1| PREDICTED: semaphorin-3E-like [Macaca mulatta]
Length = 735
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 172 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 231
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG +FDE++
Sbjct: 232 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTHFDELE 270
>gi|410952176|ref|XP_003982759.1| PREDICTED: semaphorin-3D [Felis catus]
Length = 777
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG+
Sbjct: 258 DKIYFFFRESSQEGTTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGNDG 317
Query: 91 FPFYFDEIQ 99
+FDE+Q
Sbjct: 318 ADTHFDELQ 326
>gi|432863503|ref|XP_004070099.1| PREDICTED: semaphorin-3E-like [Oryzias latipes]
Length = 792
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 11 QTEQYDSMSLNAPNFVSSL-------TQGDFVYFFFRETAVEFINCGKAVYSRVARVCKY 63
+TE+ D LNAP FV S D VYFFF E V+ +AVY+R+ RVC
Sbjct: 215 RTERNDREQLNAPKFVGSALIPDNDDRDDDKVYFFFTEREVDAEGVNRAVYTRIGRVCAN 274
Query: 64 DRGGPHRFRNRWTSFLKSRLNCSV--PGDFPFYFDEIQ 99
D+GG NRW+SF K+RL CSV P +FDE++
Sbjct: 275 DQGGQRMLVNRWSSFQKTRLICSVAGPNGIDTHFDELE 312
>gi|73982001|ref|XP_533138.2| PREDICTED: semaphorin-3D [Canis lupus familiaris]
Length = 777
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 33 DFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD-- 90
D +YFFFRE++ E K + SRV RVCK D GG N+WT+FLK+RL CS+PG+
Sbjct: 258 DKIYFFFRESSQEGTTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGNDG 317
Query: 91 FPFYFDEIQ 99
+FDE+Q
Sbjct: 318 ADTHFDELQ 326
>gi|194210682|ref|XP_001915766.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4A [Equus caballus]
Length = 726
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + +FV+++ VYFFF ETA EF K SR
Sbjct: 205 EPILIRTLGSQPVLKTDNFLRWLQPDASFVAAIPSTQVVYFFFEETASEFEFFEKLHTSR 264
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 265 VARVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQLPF 301
>gi|291394891|ref|XP_002713905.1| PREDICTED: semaphorin 3E [Oryctolagus cuniculus]
Length = 838
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 9 PLQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVC 61
P++TE + L P FV S D VYFFF E A+E + A+Y+RV R+C
Sbjct: 247 PIRTEPDNERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAEHGAHAIYARVGRLC 306
Query: 62 KYDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 307 VNDAGGQRILVNKWSTFLKARLVCSVPGVNGIDTYFDELE 346
>gi|403257158|ref|XP_003921199.1| PREDICTED: semaphorin-3E isoform 2 [Saimiri boliviensis
boliviensis]
Length = 714
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D LN P FV S D VYFFF E A+E + +Y+RV R+C
Sbjct: 152 IRTEHDDERLLNEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAEDNAHTIYARVGRLCV 211
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 212 NDIGGQRILVNKWSTFLKARLVCSVPGTNRIDTYFDELE 250
>gi|355560866|gb|EHH17552.1| hypothetical protein EGK_13979 [Macaca mulatta]
gi|355747882|gb|EHH52379.1| hypothetical protein EGM_12810 [Macaca fascicularis]
gi|380787549|gb|AFE65650.1| semaphorin-3E isoform 1 precursor [Macaca mulatta]
Length = 775
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 212 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG +FDE++
Sbjct: 272 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTHFDELE 310
>gi|301611557|ref|XP_002935293.1| PREDICTED: semaphorin-3D-like [Xenopus (Silurana) tropicalis]
Length = 776
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 13/101 (12%)
Query: 10 LQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAVYSRVARVCK 62
++T+ D LN F + D +YFFFRE++ E K+V+SRV RVCK
Sbjct: 227 IKTDTDDHYWLNGAKFFGAYAIPDTYNPDDDKIYFFFRESSPEGSFSEKSVFSRVGRVCK 286
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVP----GDFPFYFDEIQ 99
D GG N+WT+FLK+RL CS+P GD YFDE+Q
Sbjct: 287 NDIGGQRSLINKWTTFLKARLVCSIPAQDGGD--TYFDELQ 325
>gi|402864355|ref|XP_003896436.1| PREDICTED: semaphorin-3E-like, partial [Papio anubis]
Length = 623
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D L P FV S D VYFFF E A+E N A+Y+RV R+C
Sbjct: 60 IRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCV 119
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPG--DFPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG +FDE++
Sbjct: 120 NDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTHFDELE 158
>gi|148237334|ref|NP_001087589.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3D [Xenopus laevis]
gi|51512998|gb|AAH80392.1| MGC82143 protein [Xenopus laevis]
Length = 685
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 1 MDPIIYREPLQTEQYDSMSLNAPNFVSSLT-------QGDFVYFFFRETAVEFINCGKAV 53
M P ++T+ D LN F + D +YFFFRE E K+V
Sbjct: 218 MGPTPDHHFIKTDTDDHYWLNGAKFFGTYAIPDTYNPDDDKIYFFFREAHPEGSFSEKSV 277
Query: 54 YSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
+SRV RVCK D GG N+WT+FLK+RL CS+PG YFDE+Q
Sbjct: 278 FSRVGRVCKNDIGGQRSLINKWTTFLKARLVCSIPGQDGGDTYFDELQ 325
>gi|47228358|emb|CAG07753.1| unnamed protein product [Tetraodon nigroviridis]
Length = 517
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 17 SMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSRVARVCKYDRGGPHRFRNRWT 76
SM+ + +S+L D VY FF ETAVE K V SRVARVCK D GG + RWT
Sbjct: 130 SMTQIPESHMSALGDDDKVYLFFSETAVECDCYQKLVVSRVARVCKGDMGGQRTLQKRWT 189
Query: 77 SFLKSRLNCSVPG 89
SF+K+R+ C VPG
Sbjct: 190 SFMKARVECPVPG 202
>gi|296209819|ref|XP_002751698.1| PREDICTED: semaphorin-3E [Callithrix jacchus]
Length = 774
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 10 LQTEQYDSMSLNAPNFVSSLTQGD-------FVYFFFRETAVEFINCGKAVYSRVARVCK 62
++TE D LN P FV S D VYFFF E A+E + +Y+RV R+C
Sbjct: 212 IRTEHDDERLLNEPRFVGSYMIPDNEDRDDNKVYFFFTEKALEAEDNAHTIYARVGRLCV 271
Query: 63 YDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
D GG N+W++FLK+RL CSVPG YFDE++
Sbjct: 272 NDIGGQRILVNKWSTFLKARLVCSVPGTNRIDTYFDELE 310
>gi|62414155|ref|NP_001014823.1| semaphorin 3ga precursor [Danio rerio]
gi|57790314|gb|AAW56083.1| semaphorin 3Ga [Danio rerio]
Length = 749
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 15/113 (13%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFV-------SSLTQGDFVYFFFRETAVEFIN- 48
DP I+R +++EQYDS LN P FV SS D +YFFFRE +++
Sbjct: 201 DPGIFRTMGSRPAVRSEQYDSKWLNEPVFVQMKQISDSSEKNDDKLYFFFREKSLDSGGG 260
Query: 49 CGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGD--FPFYFDEIQ 99
+V ++V RVC D GG N+WT+FLK+RL CSV GD +FDE++
Sbjct: 261 ASPSVLAKVGRVCLNDEGGQKSLVNKWTTFLKARLVCSVMGDDGVETFFDELR 313
>gi|194383858|dbj|BAG59287.1| unnamed protein product [Homo sapiens]
Length = 662
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + + +FV+++ VYFFF ETA EF + SR
Sbjct: 106 EPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDFFERLHTSR 165
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 166 VARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPF 202
>gi|432095747|gb|ELK26794.1| Semaphorin-6D [Myotis davidii]
Length = 1116
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 60/108 (55%), Gaps = 17/108 (15%)
Query: 2 DPIIYRE-----PLQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAV----EFINCGKA 52
D +IYR L+T +YDS ++ L + F+ R V E+ +A
Sbjct: 228 DAVIYRSMGDGSALRTIKYDS------KWIKGLRRAHFISNM-RSKVVDKVWEWFPFSQA 280
Query: 53 VYSRVARVCKYDRGGPHR-FRNRWTSFLKSRLNCSVPGDFPFYFDEIQ 99
VYSRVAR+CK D GG R WTSFLK+RLNCSVPGD FYFD +Q
Sbjct: 281 VYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQ 328
>gi|397500861|ref|XP_003821123.1| PREDICTED: semaphorin-4A isoform 1 [Pan paniscus]
gi|397500863|ref|XP_003821124.1| PREDICTED: semaphorin-4A isoform 2 [Pan paniscus]
Length = 761
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + + +FV+++ VYFFF ETA EF + SR
Sbjct: 205 EPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDFFERLHTSR 264
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 265 VARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPF 301
>gi|158261729|dbj|BAF83042.1| unnamed protein product [Homo sapiens]
Length = 723
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + + +FV+++ VYFFF ETA EF + SR
Sbjct: 167 EPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDFFERLHTSR 226
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 227 VARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPF 263
>gi|21361914|ref|NP_071762.2| semaphorin-4A isoform 1 precursor [Homo sapiens]
gi|300863072|ref|NP_001180229.1| semaphorin-4A isoform 1 precursor [Homo sapiens]
gi|300863074|ref|NP_001180230.1| semaphorin-4A isoform 1 precursor [Homo sapiens]
gi|29840871|sp|Q9H3S1.2|SEM4A_HUMAN RecName: Full=Semaphorin-4A; AltName: Full=Semaphorin-B; Short=Sema
B; Flags: Precursor
gi|18088093|gb|AAH20974.1| Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4A [Homo
sapiens]
gi|37182185|gb|AAQ88895.1| semaphorin B [Homo sapiens]
gi|119573377|gb|EAW52992.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4A, isoform
CRA_a [Homo sapiens]
gi|119573379|gb|EAW52994.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4A, isoform
CRA_a [Homo sapiens]
gi|119573380|gb|EAW52995.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4A, isoform
CRA_a [Homo sapiens]
gi|189054941|dbj|BAG37925.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 2 DPIIYR----EP-LQTEQYDSMSLNAPNFVSSLTQGDFVYFFFRETAVEFINCGKAVYSR 56
+PI+ R +P L+T+ + + +FV+++ VYFFF ETA EF + SR
Sbjct: 205 EPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDFFERLHTSR 264
Query: 57 VARVCKYDRGGPHRFRNRWTSFLKSRLNCSVPGDFPF 93
VARVCK D GG + +WT+FLK++L C+ PG PF
Sbjct: 265 VARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPF 301
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.142 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,642,715,548
Number of Sequences: 23463169
Number of extensions: 55913389
Number of successful extensions: 107321
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 104645
Number of HSP's gapped (non-prelim): 1677
length of query: 100
length of database: 8,064,228,071
effective HSP length: 69
effective length of query: 31
effective length of database: 6,445,269,410
effective search space: 199803351710
effective search space used: 199803351710
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)