BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5395
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0VCA9|TMED6_BOVIN Transmembrane emp24 domain-containing protein 6 OS=Bos taurus
GN=TMED6 PE=2 SV=1
Length = 240
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 18/202 (8%)
Query: 48 DYKIHIDPGKEDCFFQYVNPGATFYVNFQVLR----GGDGMAGFAVRNPNGQIVHPYEWK 103
D+ I I PG +CF+Q+ + FY +++V R D P G ++ E
Sbjct: 43 DFAIVIPPGGTECFWQFAHQTGYFYFSYEVQRTIGMSHDRHVAATAHTPQGFLI---ETS 99
Query: 104 KNAEYQD--TPPHGGYYSVCIDNQFSRNAGKLVNMYLTV-VRYDQWDKYHKEIE--DLNV 158
KN Q + G+Y +C+ NQ +R A V +YL V Y+ + HKE E LN
Sbjct: 100 KNVRGQINFSTHETGFYQLCLANQQNRFAS--VQVYLNFGVFYEGPEMDHKENERKQLND 157
Query: 159 SVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTT 218
++ +S R V NI + + AR R+ DF LL+ N YV WS Q LVI +
Sbjct: 158 TLDAIEESTRKVHYNIFHMWRHYNFARMRKTADFFLLQSNYNYVNWWSTAQSLVIVLSGI 217
Query: 219 VQVYFVRQLFN----SKTNKPR 236
+Q+YF+++LFN ++T KPR
Sbjct: 218 LQLYFLKRLFNTPMTTETQKPR 239
>sp|Q8WW62|TMED6_HUMAN Transmembrane emp24 domain-containing protein 6 OS=Homo sapiens
GN=TMED6 PE=2 SV=2
Length = 240
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 22/236 (9%)
Query: 16 LKYVLSGSMQAVTASTSDESAPWYENLPAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNF 75
L V S Q + P + A D+ I I PG +CF+Q+ + FY ++
Sbjct: 13 LNLVTSARSQKTEPLSGSGDQPLFRG--ADRYDFAIMIPPGGTECFWQFAHQTGYFYFSY 70
Query: 76 QVLR----GGDGMAGFAVRNPNGQIVHPYEWKK---NAEYQDTPPHGGYYSVCIDNQFSR 128
+V R D NP G ++ + + N Q+T G+Y +C+ NQ
Sbjct: 71 EVQRTVGMSHDRHVAATAHNPQGFLIDTSQGVRGQINFSTQET----GFYQLCLSNQ--H 124
Query: 129 NAGKLVNMYLTV-VRYD--QWDKYHKEIEDLNVSVQNFTDSVRTVERNINEILQQQYHAR 185
N V +YL V Y+ + D KE + LN ++ D + V+ NI + + AR
Sbjct: 125 NHFGSVQVYLNFGVFYEGPETDHKQKERKQLNDTLDAIEDGTQKVQNNIFHMWRYYNFAR 184
Query: 186 SREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVRQLFN----SKTNKPRA 237
R+ DF L++ N YV WS Q LVI + +Q+YF+++LFN + T KPR
Sbjct: 185 MRKMADFFLIQSNYNYVNWWSTAQSLVIILSGILQLYFLKRLFNVPTTTDTKKPRC 240
>sp|Q28BQ6|TMED1_XENTR Transmembrane emp24 domain-containing protein 1 OS=Xenopus
tropicalis GN=tmed1 PE=2 SV=1
Length = 220
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 56 GKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAEYQDTPPHG 115
G+++CF+Q + + +QV+ G F+V P+G ++ + + + P
Sbjct: 34 GRQECFYQTTLYNGSMEIEYQVIGGAGLDVDFSVTTPSGILLIMERRRSDGVHTVEPTEA 93
Query: 116 GYYSVCIDNQFSRNAGKLVNMYLTV------VRYDQWDKYHKEIEDLNVSVQNFTDSVRT 169
G Y +C DN FS + KLV L D W + E L++ +++ +S+ +
Sbjct: 94 GDYMICFDNSFSTISEKLVFFELIFDNQQGDEEPDSWADVVEPDELLDIKLEDIKESIES 153
Query: 170 VERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVRQLFN 229
V+ + +Q Q R+ EARD NL + N V WS I + V+ +QVY ++ LF+
Sbjct: 154 VKSRLERSIQMQTVLRAFEARDRNLQDSNLERVNFWSAINVGVLVTVAFLQVYMLKSLFD 213
Query: 230 SK 231
K
Sbjct: 214 DK 215
>sp|Q6AXN3|TMED5_RAT Transmembrane emp24 domain-containing protein 5 OS=Rattus
norvegicus GN=Tmed5 PE=2 SV=1
Length = 229
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 43 PAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW 102
P++ D+ + G+++CF+Q + A+ + +QVL GG+ F + +P G+ + +E
Sbjct: 30 PSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGGELDIDFHLASPEGRTL-VFEQ 88
Query: 103 KKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLV-------NMYLTVVRYDQWDKYHKEIED 155
+K+ G Y C DN FS + K++ NM V + W KY +
Sbjct: 89 RKSDGVHTVETEDGDYMFCFDNTFSTISEKVIFFELILDNMGEEVEGQEDWKKYITNTDV 148
Query: 156 LNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAA 215
L + +++ +S+ +++ +++ Q R+ EARD N+ E N V WSV+ ++V+
Sbjct: 149 LEMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSVVNLMVMVV 208
Query: 216 TTTVQVYFVRQLFNSK 231
+ +QVY ++ LF K
Sbjct: 209 VSAIQVYTLKSLFEDK 224
>sp|Q9CXE7|TMED5_MOUSE Transmembrane emp24 domain-containing protein 5 OS=Mus musculus
GN=Tmed5 PE=2 SV=1
Length = 229
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 43 PAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW 102
P++ D+ + G+++CF+Q + A+ + +QVL GG+ F + +P G+ + +E
Sbjct: 30 PSLDSDFTFTLPAGRKECFYQPMPLKASLEIEYQVLDGGELDIDFHLTSPEGRTL-VFEQ 88
Query: 103 KKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLV-------NMYLTVVRYDQWDKYHKEIED 155
+K+ G Y C DN FS + K++ NM V + W KY +
Sbjct: 89 RKSDGVHTIETEDGDYMFCFDNTFSTISEKVIFFELILDNMGEEVQGQEDWKKYITNTDV 148
Query: 156 LNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAA 215
L + +++ +S+ +++ +++ Q R+ EARD N+ E N V WSV+ ++V+
Sbjct: 149 LEMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSVVNLMVMVV 208
Query: 216 TTTVQVYFVRQLFNSK 231
+ +QVY ++ LF K
Sbjct: 209 VSAIQVYTLKSLFEDK 224
>sp|Q9Y3A6|TMED5_HUMAN Transmembrane emp24 domain-containing protein 5 OS=Homo sapiens
GN=TMED5 PE=1 SV=1
Length = 229
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 43 PAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW 102
P++ D+ + G+++CF+Q + A+ + +QVL G F + +P G+ + +E
Sbjct: 30 PSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDIDFHLASPEGKTL-VFEQ 88
Query: 103 KKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLV-------NMYLTVVRYDQWDKYHKEIED 155
+K+ G Y C DN FS + K++ NM + W KY +
Sbjct: 89 RKSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGTDI 148
Query: 156 LNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAA 215
L++ +++ +S+ +++ +++ Q R+ EARD N+ E N V WS++ ++V+
Sbjct: 149 LDMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVV 208
Query: 216 TTTVQVYFVRQLFNSK 231
+ +QVY ++ LF K
Sbjct: 209 VSAIQVYMLKSLFEDK 224
>sp|Q5R809|TMED5_PONAB Transmembrane emp24 domain-containing protein 5 OS=Pongo abelii
GN=TMED5 PE=2 SV=1
Length = 229
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 43 PAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW 102
P++ D+ + G+ +CF+Q + A+ + +QVL G F + +P G+ + +E
Sbjct: 30 PSLDSDFTFTLPAGQRECFYQPMPLKASLEIEYQVLDGAGLDIDFHLASPEGKTL-VFEQ 88
Query: 103 KKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLV-------NMYLTVVRYDQWDKYHKEIED 155
+K+ G Y C DN FS + K++ NM + W KY +
Sbjct: 89 RKSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGTDM 148
Query: 156 LNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAA 215
L++ +++ +S+ +++ +++ Q R+ EARD N+ E N V WS++ ++V+
Sbjct: 149 LDMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVV 208
Query: 216 TTTVQVYFVRQLFNSK 231
+ +QVY ++ LF K
Sbjct: 209 VSAIQVYMLKSLFEDK 224
>sp|Q2KJ84|TMED5_BOVIN Transmembrane emp24 domain-containing protein 5 OS=Bos taurus
GN=TMED5 PE=2 SV=1
Length = 226
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 43 PAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW 102
P++ D+ + G+++CF+Q + A+ + +QVL G F + +P G+ + +E
Sbjct: 27 PSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDIDFHLASPEGKTL-VFEQ 85
Query: 103 KKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLV-------NMYLTVVRYDQWDKYHKEIED 155
+K+ G Y C DN FS + K++ NM + W KY +
Sbjct: 86 RKSDGVHTIETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQEQEQEDWKKYITGTDM 145
Query: 156 LNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAA 215
L++ +++ +S+ +++ +++ Q R+ EARD N+ E N V WS++ ++V+
Sbjct: 146 LDMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVV 205
Query: 216 TTTVQVYFVRQLFNSK 231
+ +QVY ++ LF K
Sbjct: 206 VSAIQVYMLKSLFEDK 221
>sp|Q54BN0|TMEDB_DICDI Transmembrane emp24 domain-containing protein B OS=Dictyostelium
discoideum GN=empB PE=3 SV=1
Length = 209
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 91/188 (48%), Gaps = 13/188 (6%)
Query: 51 IHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHP---YEWKKNAE 107
+ ++P ++CF+ ++ G T + +QV+RGG + +P G + ++ + +
Sbjct: 27 LQVEPKSQECFYNFIESGKTSLLLYQVIRGGLLDINVKLTDPKGNTIFERLHFDTQMKGK 86
Query: 108 YQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDL--NVSVQNFTD 165
T G Y VC +N+ SR K+V W + ++++ S+
Sbjct: 87 QSFTAGESGAYKVCFNNEMSRFTAKVVTF--------TWASEEEGVKEVAKGDSITPMDQ 138
Query: 166 SVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVR 225
SV+ +ER + ++ +Q R RE + + E N V+ W++ +++V+ Q++++R
Sbjct: 139 SVQKIERVLQSVIHEQKKLRYREQANRDTSESTNARVVWWTIAEVIVLVVMGVGQIWYLR 198
Query: 226 QLFNSKTN 233
+ F++K+
Sbjct: 199 KWFDNKST 206
>sp|Q5BK85|TMED1_RAT Transmembrane emp24 domain-containing protein 1 OS=Rattus
norvegicus GN=Tmed1 PE=2 SV=1
Length = 227
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 48 DYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAE 107
++ + G++ CF+Q A+ +QV+ G F + +P G ++ K +
Sbjct: 33 EFTFLLPAGRKQCFYQSAPANASLETEYQVIGGAGLDVDFTLESPQGVLLVSESRKADGV 92
Query: 108 YQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRY------DQWDKYHKEIEDLNVSVQ 161
+ P G Y +C DN FS + KLV L + + W + + E L+V ++
Sbjct: 93 HTVEPTEAGDYRLCFDNSFSTISEKLVFFELIFDSFQDEEEVEGWAEAVEPEEMLDVKME 152
Query: 162 NFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQV 221
+ +S+ T+ + +Q R+ EARD NL EDN V WS + V+ +QV
Sbjct: 153 DIKESIETMRTRLERSIQMLTLLRAFEARDRNLQEDNLERVNFWSAANVAVLLLVAVLQV 212
Query: 222 YFVRQLFNSKTNKP 235
+++ F+ K P
Sbjct: 213 CTLKRFFHDKCPVP 226
>sp|Q3V009|TMED1_MOUSE Transmembrane emp24 domain-containing protein 1 OS=Mus musculus
GN=Tmed1 PE=2 SV=1
Length = 227
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 48 DYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAE 107
++ + G++ CF+Q A+ +QV+ G F + +P G ++ K +
Sbjct: 33 EFTFLLPAGRKQCFYQSAPANASLETEYQVIGGAGLDVDFTLESPQGVLLVSESRKADGV 92
Query: 108 YQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRY------DQWDKYHKEIEDLNVSVQ 161
+ P G Y +C DN FS + KLV L + + W + + E L+V ++
Sbjct: 93 HTVEPTEAGDYRLCFDNSFSTISEKLVFFELIFDSFQDEEEVEGWAEAVEPEEMLDVKME 152
Query: 162 NFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQV 221
+ +S+ T+ + +Q R+ EARD NL EDN V WS + V+ +QV
Sbjct: 153 DIKESIETMRTRLERSIQMLTLLRAFEARDRNLQEDNLERVNFWSAANVAVLLLVAVLQV 212
Query: 222 YFVRQLFNSKTNKP 235
+++ F+ K P
Sbjct: 213 CTLKRFFHDKRPVP 226
>sp|Q9CQG0|TMED6_MOUSE Transmembrane emp24 domain-containing protein 6 OS=Mus musculus
GN=Tmed6 PE=2 SV=1
Length = 239
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Query: 48 DYKIHIDPGKEDCFFQYVNPGATFYVNFQVLR----GGDGMAGFAVRNPNGQIVHPYE-- 101
D+ I + PG +CF+Q+ + Y +++V R D P G ++ +
Sbjct: 43 DFAIVVSPGAIECFWQFADQMGYLYFSYEVQRILGMSHDRHIVATAHTPQGFLIDTSQDV 102
Query: 102 -WKKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTV-VRYDQWDKYHKEIE--DLN 157
+ N Q+T G+Y +C+ N+ +R + + +YL V Y+ + HK+ + LN
Sbjct: 103 RGQINFATQET----GFYQLCLKNEQNRFSS--IQVYLNFGVFYEGPEVDHKQSQRKQLN 156
Query: 158 VSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATT 217
++ DS + VE + + + +AR R+ DF LL+ N YV WS Q L I +
Sbjct: 157 DTLDAIKDSTQRVENQVFHMWRFYNYARMRKVADFFLLQSNYTYVNWWSTAQSLAIVLSG 216
Query: 218 TVQVYFVRQLFNSKTN---KPR 236
+Q+YF+++LF + T KPR
Sbjct: 217 ALQLYFLKRLFTASTTDTKKPR 238
>sp|Q769F9|TMEDA_DICDI Transmembrane emp24 domain-containing protein A OS=Dictyostelium
discoideum GN=empA PE=3 SV=1
Length = 205
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Query: 44 AVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWK 103
++ + + E+C ++ + +F FQV++GG F + +P+ +IV+ + +
Sbjct: 20 SIVESFSFKVSAKVEECIYEEIGVDLSFTAMFQVIQGGFNDIDFTIISPDKRIVYSGQRE 79
Query: 104 KNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKY--HKEIEDLNVSVQ 161
G YS C N+ S K V+ L+V + K++ + S+
Sbjct: 80 SEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESSPIREIAKKKDLTPIERSIM 139
Query: 162 NFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQV 221
+D V V+ +Q + + REA N E N V+ WSV + V+ A + Q+
Sbjct: 140 TLSDGVIAVK-------NEQNYFKMREAAHRNTAESTNSRVLWWSVFEAFVLIALSIWQI 192
Query: 222 YFVRQLFNSK 231
Y++R+ F K
Sbjct: 193 YYLRRFFEVK 202
>sp|Q5R7E6|TMED1_PONAB Transmembrane emp24 domain-containing protein 1 OS=Pongo abelii
GN=TMED1 PE=2 SV=1
Length = 227
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 48 DYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAE 107
++ + G++ CF+Q A+ +QV+ G F + +P G ++ K +
Sbjct: 33 EFTFLLPAGRKQCFYQSAPANASLETEYQVIGGAGLDVDFTLESPQGVLLVSESRKADGV 92
Query: 108 YQDTPPHGGYYSVCIDNQFSRNAGKLV--NMYLTVVRYDQ----WDKYHKEIEDLNVSVQ 161
+ P G Y +C DN FS + KLV + ++ D+ W + + E L+V ++
Sbjct: 93 HTVEPTEAGDYKLCFDNSFSTISEKLVFFELIFDSLQDDEEVEGWAEAVEPEEMLDVKME 152
Query: 162 NFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQV 221
+ +S+ T+ + +Q R+ EARD NL E N V WS + + V+ +QV
Sbjct: 153 DIKESIETMRTRLERSIQMLTLLRAFEARDRNLQEGNLERVNFWSAVNVAVLLLVAVLQV 212
Query: 222 YFVRQLFNSKTNKP 235
+++ F K P
Sbjct: 213 CTLKRFFQDKRPVP 226
>sp|Q13445|TMED1_HUMAN Transmembrane emp24 domain-containing protein 1 OS=Homo sapiens
GN=TMED1 PE=1 SV=1
Length = 227
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 48 DYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAE 107
++ + G++ CF+Q A+ +QV+ G F + +P G ++ K +
Sbjct: 33 EFTFLLPAGRKQCFYQSAPANASLETEYQVIGGAGLDVDFTLESPQGVLLVSESRKADGV 92
Query: 108 YQDTPPHGGYYSVCIDNQFSRNAGKLV--NMYLTVVRYDQ----WDKYHKEIEDLNVSVQ 161
+ P G Y +C DN FS + KLV + ++ D+ W + + E L+V ++
Sbjct: 93 HTVEPTEAGDYKLCFDNSFSTISEKLVFFELIFDSLQDDEEVEGWAEAVEPEEMLDVKME 152
Query: 162 NFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQV 221
+ +S+ T+ + +Q R+ EARD NL E N V WS + + V+ +QV
Sbjct: 153 DIKESIETMRTRLERSIQMLTLLRAFEARDRNLQEGNLERVNFWSAVNVAVLLLVAVLQV 212
Query: 222 YFVRQLFNSKTNKP 235
+++ F K P
Sbjct: 213 CTLKRFFQDKRPVP 226
>sp|Q9P7I9|EMP24_SCHPO Endosomal protein P24B OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=emp24 PE=3 SV=1
Length = 199
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 44 AVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWK 103
+V + I + P + +CF++ + V +Q GGD + ++ NP GQI+H
Sbjct: 17 SVVFGHGITLKPHQRECFYENLRNNDQMSVTYQTNVGGDQLVSMSIYNPAGQIMHQEVPN 76
Query: 104 KNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQN- 162
A+Y T + G Y C N K V + V Y I D ++ N
Sbjct: 77 SMAQYSFTVKNPGKYMYCFYNDALDGESKEVLFNVHGVIY---------ISDEDLDANNP 127
Query: 163 FTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVY 222
VR + I+++ +Q + +RE N E N V WS++Q +++ + Q++
Sbjct: 128 LLGKVRQLHDTISKVKHEQEYFVARERIHRNTAESTNDRVKWWSILQTVILVSVCVFQIF 187
Query: 223 FVRQLFNSK 231
++++LF K
Sbjct: 188 YLKRLFEVK 196
>sp|Q2TBK5|TMED1_BOVIN Transmembrane emp24 domain-containing protein 1 OS=Bos taurus
GN=TMED1 PE=2 SV=1
Length = 227
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 6/194 (3%)
Query: 48 DYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAE 107
++ + G++ CF+Q A+ +QV+ G F++ +P G ++ K +
Sbjct: 33 EFTFLLPAGRKQCFYQSAPANASLETEYQVIGGAGLDVDFSLESPQGVLLVSESRKADGV 92
Query: 108 YQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTV------VRYDQWDKYHKEIEDLNVSVQ 161
+ P G Y +C DN FS + KLV L + W + + E L V ++
Sbjct: 93 HTVEPTEAGDYKLCFDNSFSTISEKLVFFELIFDSLQDEEEVEGWAEAVEPEEILEVKME 152
Query: 162 NFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQV 221
+ +S+ T+ + +Q R+ EARD NL E N V WS + + V+ +QV
Sbjct: 153 DIKESIETMRIRLERSIQVLTLLRAFEARDRNLQEGNLERVNFWSAVNVAVLLLVAVLQV 212
Query: 222 YFVRQLFNSKTNKP 235
+++ F K P
Sbjct: 213 CTLKRFFQDKRPVP 226
>sp|Q9Y3B3|TMED7_HUMAN Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens
GN=TMED7 PE=1 SV=2
Length = 224
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Query: 43 PAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW 102
P A + + + CF++ + G + FQV+ GG + +P+G++++
Sbjct: 31 PGGASEITFELPDNAKQCFYEDIAQGTKCTLEFQVITGGHYDVDCRLEDPDGKVLYKEMK 90
Query: 103 KKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQN 162
K+ + T G Y C N+FS K V V D E+ ++
Sbjct: 91 KQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVGE----DPPLFPSENRVSALTQ 146
Query: 163 FTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVY 222
+ ++ + ++ Q H R REA+ + ED N V WSV + L++ + QV+
Sbjct: 147 MESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVF 206
Query: 223 FVRQLFNSK 231
++ F+ K
Sbjct: 207 LLKSFFSDK 215
>sp|D3ZTX0|TMED7_RAT Transmembrane emp24 domain-containing protein 7 OS=Rattus
norvegicus GN=Tmed7 PE=1 SV=1
Length = 226
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Query: 43 PAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW 102
P+ + + + CF++ + G + FQV+ GG + +P+G++++
Sbjct: 33 PSGGSEITFELPDNAKQCFYEDITQGTKCTLEFQVITGGHYDVDCRLEDPDGKVLYKEMK 92
Query: 103 KKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQN 162
K+ + T G Y C N+FS K V V D E+ ++
Sbjct: 93 KQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVGE----DPPLFPSENRVSALTQ 148
Query: 163 FTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVY 222
+ ++ + ++ Q H R REA+ + ED N V WSV + L++ + QV+
Sbjct: 149 MESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVF 208
Query: 223 FVRQLFNSK 231
++ F+ K
Sbjct: 209 LLKSFFSDK 217
>sp|O17528|TMED2_CAEEL Suppressor/enhancer of lin-12 protein 9 OS=Caenorhabditis elegans
GN=sel-9 PE=1 SV=1
Length = 203
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 1/187 (0%)
Query: 46 AMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKN 105
A Y IH+D +E CFF + G + F+V GG + P+ + ++ E + +
Sbjct: 16 AASYFIHVDANEEQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGPDNKEIYKGERESS 75
Query: 106 AEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTD 165
++ G Y+ C N+ S K V M+ + +
Sbjct: 76 GKFTFAAHMDGVYTYCFGNKMSTMTPKAV-MFTVEITEPHQQAPGAAANQDAADNAKLEE 134
Query: 166 SVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVR 225
VR + + + +Q + RE N+ E+ N V+ W+ + V+ T Q+++++
Sbjct: 135 MVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLVGMTVGQIFYLK 194
Query: 226 QLFNSKT 232
+ F +T
Sbjct: 195 RFFEVRT 201
>sp|Q78IS1|TMED3_MOUSE Transmembrane emp24 domain-containing protein 3 OS=Mus musculus
GN=Tmed3 PE=2 SV=1
Length = 221
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 3/195 (1%)
Query: 43 PAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW 102
P + + + + CF + V G F +++QV+ GG V +P G +++
Sbjct: 27 PLRSAELTFELPDNAKQCFHEEVEQGVKFSLDYQVITGGHYDVDCYVEDPRGNVIYRETK 86
Query: 103 KKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQN 162
K+ + G Y C N+FS + K V V ++ + ++
Sbjct: 87 KQYDSFTYKTEAKGVYRFCFSNEFSTFSHKTVYFDFQV---GDEPPILPDMGNRVTALTQ 143
Query: 163 FTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVY 222
+ T+ + ++ Q H R REA+D ED N V WSV + + + + QV
Sbjct: 144 MESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVL 203
Query: 223 FVRQLFNSKTNKPRA 237
++ F K RA
Sbjct: 204 LLKSFFTEKRPVNRA 218
>sp|Q6AY25|TMED3_RAT Transmembrane emp24 domain-containing protein 3 OS=Rattus
norvegicus GN=Tmed3 PE=1 SV=1
Length = 221
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 3/178 (1%)
Query: 60 CFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAEYQDTPPHGGYYS 119
CF + V G F +++QV+ GG V +P G I++ K+ + G Y
Sbjct: 44 CFHEEVEQGVKFSLDYQVITGGHYDVDCYVEDPMGNIIYRETKKQYDSFTYKTEVKGVYR 103
Query: 120 VCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTDSVRTVERNINEILQ 179
C N+FS + K V V ++ + ++ + T+ + ++
Sbjct: 104 FCFSNEFSTFSHKTVYFDFQV---GDEPPILPDMGNRVTALTQMESACVTIHEALKTVID 160
Query: 180 QQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVRQLFNSKTNKPRA 237
Q H R REA+D ED N V WSV + + + + QV ++ F K RA
Sbjct: 161 SQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEKRPINRA 218
>sp|Q9Y3Q3|TMED3_HUMAN Transmembrane emp24 domain-containing protein 3 OS=Homo sapiens
GN=TMED3 PE=1 SV=1
Length = 217
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 3/178 (1%)
Query: 60 CFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAEYQDTPPHGGYYS 119
CF + V G F +++QV+ GG V +P G ++ K+ + G Y
Sbjct: 40 CFHEEVEQGVKFSLDYQVITGGHYDVDCYVEDPQGNTIYRETKKQYDSFTYRAEVKGVYQ 99
Query: 120 VCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTDSVRTVERNINEILQ 179
C N+FS + K V V ++ + ++ + T+ + ++
Sbjct: 100 FCFSNEFSTFSHKTVYFDFQV---GDEPPILPDMGNRVTALTQMESACVTIHEALKTVID 156
Query: 180 QQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVRQLFNSKTNKPRA 237
Q H R REA+D ED N V WSV + + + + QV ++ F K RA
Sbjct: 157 SQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEKRPISRA 214
>sp|Q12450|ERP4_YEAST Protein ERP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ERP4 PE=1 SV=1
Length = 207
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 13 VFSLKYVLSGSMQAVTASTSDESAPWYENLPAVAMDYKIHIDPGKEDCFFQYVNPGATFY 72
VF+L +L S +T + S AP +LPA KE ++ +
Sbjct: 3 VFTLIAILFSS-SLLTHAFSSNYAPVGISLPAFT----------KECLYYDLSSDKDVLV 51
Query: 73 VNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAEYQDTPPHGGYYSVCIDNQFSRNAGK 132
V++QVL GG+ F + P+G ++ KK++++ G Y+ C+ N + + K
Sbjct: 52 VSYQVLTGGNFEIDFDITAPDGSVIVTERQKKHSDFLLKSFGIGKYTFCLSNNYGTSPKK 111
Query: 133 LVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDF 192
+ +T+ + + H+ ED+ + N +++ ++RN+N+I + + R+RE R+
Sbjct: 112 V---EITLEKEKEIVSSHESKEDI---IAN--NAIEEIDRNLNKITKTMDYLRAREWRNM 163
Query: 193 NLLEDNNRYVMNWSVIQILVIAATTTVQVYFVRQLFNSK 231
+ + S++ + V+ + VQ ++ F S+
Sbjct: 164 YTVSSTESRLTWLSLLIMGVMVGISIVQALIIQFFFTSR 202
>sp|A7SXK3|TMED_NEMVE Transmembrane emp24 domain-containing protein OS=Nematostella
vectensis GN=v1g194562 PE=3 SV=1
Length = 203
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 5/190 (2%)
Query: 42 LPAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYE 101
L ++ Y I ID E+CF V G + F+V GG + P+ ++++ E
Sbjct: 16 LARSSLCYFITIDAHGEECFHDKVTSGTKMGLIFEVAEGGFLDIDVKIIGPDQKVIYSGE 75
Query: 102 WKKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQ 161
+ + +Y G Y+ C N+ S K++ + D + ++ N
Sbjct: 76 RETSGKYTFAAHMDGTYNYCFSNKMSTMTPKVLKFSM-----DIGEAPKDTSKEDNAGHD 130
Query: 162 NFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQV 221
++ V + + + +Q + RE ++ ++ N V+ WS + LV+ A T QV
Sbjct: 131 KLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFFESLVLVAMTLGQV 190
Query: 222 YFVRQLFNSK 231
Y++++ F +
Sbjct: 191 YYLKRFFEVR 200
>sp|P49020|TMED2_CRIGR Transmembrane emp24 domain-containing protein 2 (Fragment)
OS=Cricetulus griseus GN=TMED2 PE=1 SV=1
Length = 196
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 23/195 (11%)
Query: 46 AMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKN 105
A Y + ID E+CFF+ V G + F+V GG + P+ + ++ + + +
Sbjct: 13 ASGYFVSIDAHAEECFFERVTSGTKMGLIFEVAEGGFLDIDVEITGPDNKGIYKGDRESS 72
Query: 106 AEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTD 165
+Y G Y C N+ S K+V + + + E QN
Sbjct: 73 GKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAH------QN--- 123
Query: 166 SVRTVERNINEIL--------QQQY-HARSREARDFNLLEDNNRYVMNWSVIQILVIAAT 216
+E INE+ +Q+Y R R R N ++ N V+ WS + LV+ A
Sbjct: 124 ---KLEEMINELAVAMTAVKHEQEYMEVRERIHRAIN--DNTNSRVVLWSFFEALVLVAM 178
Query: 217 TTVQVYFVRQLFNSK 231
T Q+Y++++ F +
Sbjct: 179 TLGQIYYLKRFFEVR 193
>sp|Q63524|TMED2_RAT Transmembrane emp24 domain-containing protein 2 OS=Rattus
norvegicus GN=Tmed2 PE=1 SV=1
Length = 201
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 49 YKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAEY 108
Y + ID E+CFF+ V G + F+V GG + P+ + ++ + + + +Y
Sbjct: 21 YFVSIDAHAEECFFERVTSGTKMGLIFEVAEGGFLDIDVEITGPDNKGIYKGDRESSGKY 80
Query: 109 QDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTDSVR 168
G Y C N+ S K+V + + + E QN
Sbjct: 81 TFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAH------QN------ 128
Query: 169 TVERNINEIL--------QQQY-HARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTV 219
+E INE+ +Q+Y R R R N ++ N V+ WS + LV+ A T
Sbjct: 129 KLEEMINELAVAMTAVKHEQEYMEVRERIHRAIN--DNTNSRVVLWSFFEALVLVAMTLG 186
Query: 220 QVYFVRQLFNSK 231
Q+Y++++ F +
Sbjct: 187 QIYYLKRFFEVR 198
>sp|Q15363|TMED2_HUMAN Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens
GN=TMED2 PE=1 SV=1
Length = 201
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 49 YKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAEY 108
Y + ID E+CFF+ V G + F+V GG + P+ + ++ + + + +Y
Sbjct: 21 YFVSIDAHAEECFFERVTSGTKMGLIFEVAEGGFLDIDVEITGPDNKGIYKGDRESSGKY 80
Query: 109 QDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTDSVR 168
G Y C N+ S K+V + + + E QN
Sbjct: 81 TFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAH------QN------ 128
Query: 169 TVERNINEIL--------QQQY-HARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTV 219
+E INE+ +Q+Y R R R N ++ N V+ WS + LV+ A T
Sbjct: 129 KLEEMINELAVAMTAVKHEQEYMEVRERIHRAIN--DNTNSRVVLWSFFEALVLVAMTLG 186
Query: 220 QVYFVRQLFNSK 231
Q+Y++++ F +
Sbjct: 187 QIYYLKRFFEVR 198
>sp|Q9R0Q3|TMED2_MOUSE Transmembrane emp24 domain-containing protein 2 OS=Mus musculus
GN=Tmed2 PE=1 SV=1
Length = 201
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 49 YKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAEY 108
Y + ID E+CFF+ V G + F+V GG + P+ + ++ + + + +Y
Sbjct: 21 YFVSIDAHAEECFFERVTSGTKMGLIFEVAEGGFLDIDVEITGPDNKGIYKGDRESSGKY 80
Query: 109 QDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTDSVR 168
G Y C N+ S K+V + + + E QN
Sbjct: 81 TFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAH------QN------ 128
Query: 169 TVERNINEIL--------QQQY-HARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTV 219
+E INE+ +Q+Y R R R N ++ N V+ WS + LV+ A T
Sbjct: 129 KLEEMINELAVAMTAVKHEQEYMEVRERIHRAIN--DNTNSRVVLWSFFEALVLVAMTLG 186
Query: 220 QVYFVRQLFNSK 231
Q+Y++++ F +
Sbjct: 187 QIYYLKRFFEVR 198
>sp|O13770|YE98_SCHPO Uncharacterized membrane protein C17A5.08 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC17A5.08 PE=3 SV=1
Length = 210
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 44 AVAMDYKIHIDPGKEDCFF-QYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW 102
A A++ ++ ++ C++ + G + + V GG + ++ P+ + V +
Sbjct: 18 ASAIELTFKLENQEKQCYYLDSFHTGEKTHFTYAVQSGGSFDVDYMIKAPSQKTVALGKK 77
Query: 103 KKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTV--------VRYDQWDKYHKEIE 154
++ A+ T G Y C DN S K+V M +T+ + D+ Y K+
Sbjct: 78 RRQADVFFTLEEKGEYEFCFDNHMSTFTDKIVTMEITMENELSLPALTRDEAKDYKKD-- 135
Query: 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIA 214
S+Q+ +V + ++EI + Q + ++RE R+++ ++ + +S+ + +++
Sbjct: 136 ----SMQS---TVLEISTALSEIDRVQNYFKTREHRNYSTVKSTQARIFWFSLAESIMVV 188
Query: 215 ATTTVQVYFVRQLFN 229
A + +QV+ V+ F
Sbjct: 189 ALSALQVFIVKTFFK 203
>sp|Q9LIL4|P24B3_ARATH Transmembrane emp24 domain-containing protein p24beta3
OS=Arabidopsis thaliana GN=At3g22845 PE=2 SV=1
Length = 214
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 58 EDCFFQYV-NPGATFYVNFQVLRG----GDGMAG--FAVRNPNGQIVHPYEWKKNAEYQD 110
E+C +YV G T NF V+ G G F V +P G IV + +++
Sbjct: 35 EECVQEYVLYEGDTVSGNFVVVDHDIFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEF 94
Query: 111 TPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKE--IEDLNVSVQNFTDSVR 168
P G Y C N +S + V+ Y+ V K+ ++ +NV + +++
Sbjct: 95 KAPKSGMYKFCFHNPYS--TPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALE 152
Query: 169 TVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVRQLF 228
+V + +Q + ++R+ R + E + V+ ++V + + +AA + +QV ++R+LF
Sbjct: 153 SV-------VAEQKYLKARDTRHRHTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLF 205
Query: 229 N 229
+
Sbjct: 206 S 206
>sp|P39704|ERP2_YEAST Protein ERP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ERP2 PE=1 SV=1
Length = 215
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 24 MQAVTASTSDESAPWYENLPAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDG 83
+ +V AS+S AP +LPA + KE ++ V + V +QVL GG+
Sbjct: 20 VNSVAASSS--YAPVAISLPAFS----------KECLYYDMVTEDDSLAVGYQVLTGGNF 67
Query: 84 MAGFAVRNPNGQIVHPYEWKKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRY 143
F + P+G ++ + KK +++ G Y+ C N + A K V + L +
Sbjct: 68 EIDFDITAPDGSVITSEKQKKYSDFLLKSFGVGKYTFCFSNNYG-TALKKVEITLEKEK- 125
Query: 144 DQWDKYHKEIEDLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFN 193
D++ ++ + ++ N +V ++RN+N+I + + R+RE R+ +
Sbjct: 126 TLTDEHEADVNNDDIIANN---AVEEIDRNLNKITKTLNYLRAREWRNMS 172
>sp|Q6CWW7|TMEDA_KLULA Endoplasmic reticulum vesicle protein 25 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ERV25 PE=3 SV=1
Length = 212
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 24 MQAVTASTSDESAPWYENLPAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRG-GD 82
M++ A A ++E + AV D P ++ C +V+ G ++ + GD
Sbjct: 1 MKSFAACVLLLCALFFEQVFAVRFDIPASTKP-EQVCIRDFVSEGQLVLIDIETDGSVGD 59
Query: 83 GMA-GFAVRNPNGQIVHPYEWKKNAEYQD------TPPHGGYYSVCIDNQFSRNAGKLV- 134
G VR+ NG E+++N + T P + VC +N N L
Sbjct: 60 GQQLNLYVRDSNGN-----EYRRNRDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSR 114
Query: 135 NMYLTVVRYDQ---WDKYHKEIEDLNVSVQNFTDSVRTVERNINEILQQQYHARSREARD 191
++ L + + W+K + V V+ +R +E +EI+ + + + RE R
Sbjct: 115 SIELDIESGSEARDWNKIQASEKLKPVEVE-----LRRIEELTDEIVDEFNYLKGREERL 169
Query: 192 FNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVRQLFNSK 231
+ E NR V N+S+ I+V+ A QV +++ F +K
Sbjct: 170 RDTNESTNRRVRNFSIAVIVVLVALGAWQVNYMKNFFRAK 209
>sp|P32803|EMP24_YEAST Endosomal protein P24B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=EMP24 PE=1 SV=1
Length = 203
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 60 CFFQYVNPGATFYVNFQV----LRGGDGMAG-FAVRNPN-GQIVHPYEWKKNAEYQDTPP 113
CFF+ ++ G ++FQ + + G F + P +++ + E + P
Sbjct: 32 CFFEDLSKGDELSISFQFGDRNPQSSSQLTGDFIIYGPERHEVLKTVRDTSHGEITLSAP 91
Query: 114 HGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTDSVRTVERN 173
+ G++ C N+ + K V + V Y +++D N + + +VR + +
Sbjct: 92 YKGHFQYCFLNENTGIETKDVTFNIHGVVY-------VDLDDPNTNTLD--SAVRKLSKL 142
Query: 174 INEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVRQLF 228
E+ +Q + RE N E N V WS+ Q+ V+ A + Q+Y++R+ F
Sbjct: 143 TREVKDEQSYIVIRERTHRNTAESTNDRVKWWSIFQLGVVIANSLFQIYYLRRFF 197
>sp|P38819|ERP5_YEAST Protein ERP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ERP5 PE=1 SV=1
Length = 212
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 23/188 (12%)
Query: 55 PGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIV----------HPYEWKK 104
G+ CF+++++ G + + DG+ +P + H +K
Sbjct: 28 SGETKCFYEHLSRGNLLIGDLDLYVEKDGLFE---EDPESSLTITVDETFDNDHRVLNQK 84
Query: 105 NAEYQD---TPPHGGYYSVCIDNQFSRNAGKL-VNMYLTVVRYDQWDKYHKEIEDLNVSV 160
N+ D T G + C +S+ + L V + L + + D K+ ED+N
Sbjct: 85 NSHTGDVTFTALDTGEHRFCFTPFYSKKSATLRVFIELEIGNVEALDS--KKKEDMN--- 139
Query: 161 QNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQ 220
+ V + + ++ I ++Q R +EA N E N +M WSV Q+L++ T Q
Sbjct: 140 -SLKGRVGQLTQRLSSIRKEQDAIREKEAEFRNQSESANSKIMTWSVFQLLILLGTCAFQ 198
Query: 221 VYFVRQLF 228
+ +++ F
Sbjct: 199 LRYLKNFF 206
>sp|Q8R1V4|TMED4_MOUSE Transmembrane emp24 domain-containing protein 4 OS=Mus musculus
GN=Tmed4 PE=2 SV=1
Length = 227
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 44 AVAMDYKIHIDPGKEDCFFQYVNPGATFYVN-------------FQVLRGGDGMAGFAVR 90
A A HI ++ CF + + P T + F G GM V+
Sbjct: 25 ACARGLYFHIGETEKRCFIEEI-PDETMVIGNYRTQMWDKQKEVFLPSTPGLGMH-VEVK 82
Query: 91 NPNGQIVHPYEWKKNAEYQDTPPHGGYYSVCIDNQFSRN---AGKLVNMYLTVVRYDQWD 147
+P+G++V ++ + T G + +C+ + +R AG + ++L + + +
Sbjct: 83 DPDGKVVLSRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGKLRVHLDIQVGEHAN 142
Query: 148 KYHK-----EIEDLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYV 202
Y + ++ +L + + D V +++ +Q + R RE R E N+ V
Sbjct: 143 NYPEIAAKDKLTELQLRARQLLDQVEQIQK-------EQDYQRYREERFRLTSESTNQRV 195
Query: 203 MNWSVIQILVIAATTTVQVYFVRQLFNSK 231
+ WS+ Q +++ T Q+ ++ F +K
Sbjct: 196 LWWSIAQTVILILTGIWQMRHLKSFFEAK 224
>sp|Q6FRZ3|TMEDA_CANGA Endoplasmic reticulum vesicle protein 25 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=ERV25 PE=3 SV=2
Length = 208
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 36 APWYENLPAVAMDYKIHIDPGKEDCFFQYVNPGATFYVNFQV---LRGGDGMAGFAVRNP 92
AP+ + A+ D K P ++ C +V+ G +N L G+ + V +
Sbjct: 10 APF---ISALRFDLKAESKP-EQMCIRDFVSEGELVVINIDTDGSLNDGN-VLNLYVHDS 64
Query: 93 NGQIVHPYEWKKNAEYQD----TPPHGGYYSVCIDNQF-----SRNAGKLVNMYL-TVVR 142
NG + Y KN + T P + VC +N +RNA + + + + + +
Sbjct: 65 NG---NEYRRLKNFVGEQRIAFTAPATTSFDVCFENTLDSNRGNRNAKRAIELDIESGSQ 121
Query: 143 YDQWDKYHKEIEDLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYV 202
W+K + + ++ +R +E +EI+ + + ++RE R N E N V
Sbjct: 122 ARDWNKISATEKLRPIELE-----LRKIEELTDEIVDELNYLKNREERLRNTNESTNERV 176
Query: 203 MNWSVIQILVIAATTTVQVYFVRQLFNSK 231
N+SV+ I+V+ + QV +++ F SK
Sbjct: 177 RNFSVLVIIVLTSLGAWQVNYLKNYFKSK 205
>sp|Q7Z7H5|TMED4_HUMAN Transmembrane emp24 domain-containing protein 4 OS=Homo sapiens
GN=TMED4 PE=1 SV=1
Length = 227
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 85/201 (42%), Gaps = 30/201 (14%)
Query: 52 HIDPGKEDCFFQYVNPGATFYVN-------------FQVLRGGDGMAGFAVRNPNGQIVH 98
HI ++ CF + + P T + F G GM V++P+G++V
Sbjct: 33 HIGETEKRCFIEEI-PDETMVIGNYRTQMWDKQKEVFLPSTPGLGMH-VEVKDPDGKVVL 90
Query: 99 PYEWKKNAEYQDTPPHGGYYSVCIDNQFSRN---AGKLVNMYLTVVRYDQWDKYHK---- 151
++ + T G + +C+ + +R AG + ++L + + + Y +
Sbjct: 91 SRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGKLRVHLDIQVGEHANNYPEIAAK 150
Query: 152 -EIEDLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQI 210
++ +L + + D V +++ +Q + R RE R E N+ V+ WS+ Q
Sbjct: 151 DKLTELQLRARQLLDQVEQIQK-------EQDYQRYREERFRLTSESTNQRVLWWSIAQT 203
Query: 211 LVIAATTTVQVYFVRQLFNSK 231
+++ T Q+ ++ F +K
Sbjct: 204 VILILTGIWQMRHLKSFFEAK 224
>sp|Q759T8|TMEDA_ASHGO Endoplasmic reticulum vesicle protein 25 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=ERV25 PE=3 SV=1
Length = 209
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 60 CFFQYVNPGATFYVNFQV-LRGGDG-MAGFAVRNPNGQIVHPYEWKKN-AEYQD---TPP 113
C +V G + + R GDG + F V + G + + KKN AE + T P
Sbjct: 33 CIRDFVEAGNQVVITMESDGRVGDGQVLSFYVIDSMG---NEHRRKKNFAEKLNVAFTAP 89
Query: 114 HGGYYSVCIDNQFSRNAGKL------VNMYLTVVRYDQWDKYHKEIEDLNVSVQNFTDSV 167
+ VC +N+ + AG+ VN+ D WDK + VQ +
Sbjct: 90 SSAVFDVCFENK-AEAAGRSLMRNVEVNIESGSAARD-WDKIRSAEKLRPAEVQ-----L 142
Query: 168 RTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVRQL 227
R VE +EI+++ + + RE R + E NR V N+S+ I+V AA Q+ +++
Sbjct: 143 RQVEEMSDEIVERLNYLKLREERLRDTNESTNRRVRNFSMAVIVVFAALCAWQLNYLKNY 202
Query: 228 FNSK 231
F +K
Sbjct: 203 FRAK 206
>sp|P54837|TMEDA_YEAST Endoplasmic reticulum vesicle protein 25 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ERV25 PE=1
SV=1
Length = 211
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 21/195 (10%)
Query: 48 DYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAG------FAVRNPNG-QIVHPY 100
D DP ++ C +V G + DG G VR+ G +
Sbjct: 24 DIAASTDP-EQVCIRDFVTEGQLVVADIH----SDGSVGDGQKLNLFVRDSVGNEYRRKR 78
Query: 101 EWKKNAEYQDTPPHGGYYSVCIDNQF---SRNAGKLVNMYL-TVVRYDQWDKYHKEIEDL 156
++ + T P + VC +NQ R+ + + + + + W+K
Sbjct: 79 DFAGDVRVAFTAPSSTAFDVCFENQAQYRGRSLSRAIELDIESGAEARDWNKISA----- 133
Query: 157 NVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAAT 216
N ++ +R VE +EI+ + + ++RE R + E NR V N+S++ I+V+++
Sbjct: 134 NEKLKPIEVELRRVEEITDEIVDELTYLKNREERLRDTNESTNRRVRNFSILVIIVLSSL 193
Query: 217 TTVQVYFVRQLFNSK 231
QV +++ F +K
Sbjct: 194 GVWQVNYLKNYFKTK 208
>sp|Q9FVU0|P24D4_ARATH Transmembrane emp24 domain-containing protein p24delta4
OS=Arabidopsis thaliana GN=At1g57620 PE=1 SV=1
Length = 212
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 89 VRNPNGQIVHPYEWKKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYL---TVVRYDQ 145
V P G ++H E N ++ T G Y C + + K ++ + T +
Sbjct: 69 VTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDWKTGIAAKD 128
Query: 146 WDKYHK--EIEDLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVM 203
WD + +IE + + + +V + N+ + R+REA + E N V
Sbjct: 129 WDSIARKEKIEGVELEFKKLEGAVEAIHENL-------IYLRNREAEMRIVSEKTNSRVA 181
Query: 204 NWSVIQILVIAATTTVQVYFVRQLFNSK 231
+S++ + + + +Q+ +++Q F K
Sbjct: 182 WYSIMSLGICIVVSGLQILYLKQYFEKK 209
>sp|O14324|YB79_SCHPO Uncharacterized membrane protein C16E9.09c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC16E9.09c PE=3
SV=1
Length = 215
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 92 PNGQIVHPYEWKKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQW--DKY 149
N +++ + + N + T + G + +C S + G + T + D DKY
Sbjct: 75 ANNHLIYKNDLRSNEAVRFTTTNEGTHRICY---LSTSDGAWFSSTKTRLHVDLASDDKY 131
Query: 150 HKEIEDLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQ 209
+ I ++ TD V + + IL +Q RSRE + E N V+ W+++Q
Sbjct: 132 NL-IASSEDEAKDLTDRVAALNTRLESILGEQMLQRSREMTFRDTSESANSRVVRWTIVQ 190
Query: 210 ILVIAATTTVQVYFVRQLF 228
I+V+ T Q+ +++ F
Sbjct: 191 IVVLLVTCIWQLSHLQRFF 209
>sp|Q295B2|TMEDE_DROPS Transmembrane emp24 domain-containing protein eca OS=Drosophila
pseudoobscura pseudoobscura GN=eca PE=3 SV=1
Length = 216
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 24/197 (12%)
Query: 52 HIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGF-----------AVRNPNGQIVHPY 100
HI + CF + V T VN++V GF VR+ + +I+
Sbjct: 24 HISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEVRDSDDKIILSR 83
Query: 101 EWKKNAEYQDTPPHGGYYSVCI-DNQFSRNAGKLVNMYLTVVRYDQWDKY-----HKEIE 154
+ T G + +C+ N + +G + ++L + + Y +++
Sbjct: 84 VYSSQGRISFTSHTPGEHVICMYSNSTAWFSGAQLRVHLDIQVGEHAIDYANVAQKEKLT 143
Query: 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIA 214
+L + ++ D V +I ++Q + R RE R + E N V+ WS+ Q LV+
Sbjct: 144 ELQLRIRQLLDQV-------EQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTLVLV 196
Query: 215 ATTTVQVYFVRQLFNSK 231
Q+ ++ F +K
Sbjct: 197 CMGFWQMRHLKSFFEAK 213
>sp|B4HJV5|TMEDE_DROSE Transmembrane emp24 domain-containing protein eca OS=Drosophila
sechellia GN=eca PE=3 SV=1
Length = 216
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 24/197 (12%)
Query: 52 HIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFA-----------VRNPNGQIVHPY 100
HI + CF + V T VN++V GF VR+ + +IV
Sbjct: 24 HISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEVRDSDDKIVLSR 83
Query: 101 EWKKNAEYQDTPPHGGYYSVCI-DNQFSRNAGKLVNMYLTVVRYDQWDKY-----HKEIE 154
+ T G + +C+ N + +G + ++L + + Y +++
Sbjct: 84 VYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYANVAQKEKLT 143
Query: 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIA 214
+L + ++ D V +I ++Q + R RE R + E N V+ WS+ Q +V+
Sbjct: 144 ELQLRIRQLLDQV-------EQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTIVLV 196
Query: 215 ATTTVQVYFVRQLFNSK 231
Q+ ++ F +K
Sbjct: 197 CMGFWQMRHLKSFFEAK 213
>sp|Q9S7M9|P24B2_ARATH Transmembrane emp24 domain-containing protein p24beta2
OS=Arabidopsis thaliana GN=At3g07680 PE=1 SV=1
Length = 208
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/191 (18%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 57 KEDCFFQYVN-PGATFYVNFQVLRGG-------DGMAGFAVRNPNGQIVHPYEWKKNAEY 108
+E+CF G T +V+F V++ DG+ + P G+ +H + + +A++
Sbjct: 28 REECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGV-DLVIHGPTGEQIHDFREQISAKH 86
Query: 109 QDTPPHGGYYSVCIDNQFSRNAGKLVNMYLTVVRYDQWDKYHKEIEDLNVSVQNFT---D 165
G Y C N+ + + ++ + + + +D++ K+ ++FT +
Sbjct: 87 DFVVQKKGVYRFCFTNKSPYH--ETIDFDVQLGHFAYYDQHAKD--------EHFTPLME 136
Query: 166 SVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIAATTTVQVYFVR 225
+ +E + I +Q+ ++ R + E+ ++ ++ ++ + + + +QVY +R
Sbjct: 137 QISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQVYLLR 196
Query: 226 QLFNSKTNKPR 236
+LF K R
Sbjct: 197 RLFERKLGMSR 207
>sp|Q9I7K5|TMEDE_DROME Transmembrane emp24 domain-containing protein eca OS=Drosophila
melanogaster GN=eca PE=2 SV=2
Length = 216
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 52 HIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFA-----------VRNPNGQIVHPY 100
HI + CF + V T VN++V GF VR+ + +IV
Sbjct: 24 HISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEVRDSDDKIVLSR 83
Query: 101 EWKKNAEYQDTPPHGGYYSVCI-DNQFSRNAGKLVNMYLTV-VRYDQWDKYH----KEIE 154
+ T G + +C+ N + +G + ++L + V D H +++
Sbjct: 84 VYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYAHVAQKEKLT 143
Query: 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIA 214
+L + ++ D V +I ++Q + R RE R + E N V+ WS+ Q +V+
Sbjct: 144 ELQLRIRQLLDQV-------EQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLV 196
Query: 215 ATTTVQVYFVRQLFNSK 231
Q+ ++ F +K
Sbjct: 197 CMGFWQMRHLKSFFEAK 213
>sp|B4PVC6|TMEDE_DROYA Transmembrane emp24 domain-containing protein eca OS=Drosophila
yakuba GN=eca PE=3 SV=1
Length = 216
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 24/197 (12%)
Query: 52 HIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFA-----------VRNPNGQIVHPY 100
HI + CF + V T VN++V GF VR+ + +IV
Sbjct: 24 HISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEVRDSDDKIVLSR 83
Query: 101 EWKKNAEYQDTPPHGGYYSVCI-DNQFSRNAGKLVNMYLTVVRYDQWDKY-----HKEIE 154
+ T G + +C+ N + +G + ++L + + Y +++
Sbjct: 84 VYSSQGRISFTSHTPGEHVICMYSNSTAWFSGAQLRVHLDIQVGEHAIDYANVAQKEKLT 143
Query: 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIA 214
+L + ++ D V +I ++Q + R RE R + E N V+ WS+ Q +V+
Sbjct: 144 ELQLRIRQLLDQV-------EQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLV 196
Query: 215 ATTTVQVYFVRQLFNSK 231
Q+ ++ F +K
Sbjct: 197 CMGFWQMRHLKSFFEAK 213
>sp|B3NZM5|TMEDE_DROER Transmembrane emp24 domain-containing protein eca OS=Drosophila
erecta GN=eca PE=3 SV=1
Length = 216
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 24/197 (12%)
Query: 52 HIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFA-----------VRNPNGQIVHPY 100
HI + CF + V T VN++V GF VR+ + +IV
Sbjct: 24 HISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEVRDSDDKIVLSR 83
Query: 101 EWKKNAEYQDTPPHGGYYSVCI-DNQFSRNAGKLVNMYLTVVRYDQWDKY-----HKEIE 154
+ T G + +C+ N + +G + ++L + + Y +++
Sbjct: 84 VYSSQGRISFTSHTPGEHVICMYSNSTAWFSGAQLRVHLDIQVGEHAIDYANVAQKEKLT 143
Query: 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIA 214
+L + ++ D V +I ++Q + R RE R + E N V+ WS+ Q +V+
Sbjct: 144 ELQLRIRQLLDQV-------EQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLV 196
Query: 215 ATTTVQVYFVRQLFNSK 231
Q+ ++ F +K
Sbjct: 197 CMGFWQMRHLKSFFEAK 213
>sp|B4QWH9|TMEDE_DROSI Transmembrane emp24 domain-containing protein eca OS=Drosophila
simulans GN=eca PE=3 SV=1
Length = 216
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 24/197 (12%)
Query: 52 HIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFA-----------VRNPNGQIVHPY 100
HI + CF + V T VN++V GF VR+ + +IV
Sbjct: 24 HISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEVRDSDDKIVLSR 83
Query: 101 EWKKNAEYQDTPPHGGYYSVCI-DNQFSRNAGKLVNMYLTVVRYDQWDKY-----HKEIE 154
+ T G + +C+ N + +G + ++L + + Y +++
Sbjct: 84 VYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYANVAQKEKLT 143
Query: 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIA 214
+L + ++ D V +I ++Q + R RE R + E N V+ WS+ Q +V+
Sbjct: 144 ELQLRIRQLLDQV-------EQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLV 196
Query: 215 ATTTVQVYFVRQLFNSK 231
Q+ ++ F +K
Sbjct: 197 CMGFWQMRHLKSFFEAK 213
>sp|B4NKL0|TMEDE_DROWI Transmembrane emp24 domain-containing protein eca OS=Drosophila
willistoni GN=eca PE=3 SV=1
Length = 216
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 52 HIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFA-----------VRNPNGQIVHPY 100
HI + CF + V T VN++V GF VR+ + +++
Sbjct: 24 HISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEVRDSDDKVILSR 83
Query: 101 EWKKNAEYQDTPPHGGYYSVCI-DNQFSRNAGKLVNMYLTVVRYDQWDKY-----HKEIE 154
+ T G + +C+ N + +G + ++L + + Y +++
Sbjct: 84 VYSSQGRISFTSHTPGEHVICMYSNSTAWFSGAQLRVHLDIQVGEHAIDYANVAQKEKLT 143
Query: 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILVIA 214
+L + ++ D V ++I ++Q + R RE R + E N V+ WS+ Q +V+
Sbjct: 144 ELQLRIRQLLDQV-------DQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLV 196
Query: 215 ATTTVQVYFVRQLFNSK 231
Q+ ++ F +K
Sbjct: 197 CMGFWQMRHLKSFFEAK 213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,567,980
Number of Sequences: 539616
Number of extensions: 3938745
Number of successful extensions: 8906
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 8819
Number of HSP's gapped (non-prelim): 75
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)