Query psy5395
Match_columns 237
No_of_seqs 111 out of 1123
Neff 7.9
Searched_HMMs 29240
Date Sat Aug 17 01:30:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5395.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5395hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 97.2 0.0064 2.2E-07 54.2 13.7 88 50-142 281-385 (403)
2 2d7n_A Filamin-C; beta-sandwic 93.1 0.6 2E-05 32.8 8.3 47 82-128 21-70 (93)
3 2ee9_A Filamin-B; beta-sandwic 92.5 0.48 1.6E-05 33.5 7.0 47 81-127 28-77 (95)
4 2d7m_A Filamin-C; beta-sandwic 91.8 0.93 3.2E-05 32.8 8.1 47 81-127 42-91 (115)
5 4dzg_A PLIG; lysozyme inhibito 91.6 0.33 1.1E-05 35.5 5.5 75 48-126 19-96 (114)
6 2dj4_A Filamin-B; beta-sandwic 91.2 1.2 4.2E-05 31.8 8.1 46 81-126 41-89 (108)
7 2dmb_A Filamin-B; beta-sandwic 90.9 1.4 4.9E-05 32.4 8.5 46 81-126 41-89 (124)
8 2dlg_A Filamin-B; beta-sandwic 90.8 0.46 1.6E-05 34.0 5.5 47 81-127 29-78 (102)
9 2p9r_A Alpha-2-M, alpha-2-macr 90.4 3.3 0.00011 28.9 10.7 61 66-126 14-86 (102)
10 2dmc_A Filamin-B; beta-sandwic 89.8 0.53 1.8E-05 34.4 5.2 61 66-126 28-91 (116)
11 3cnk_A Filamin-A; FLNA24, X-RA 89.1 1.4 4.8E-05 30.2 6.8 46 81-126 28-76 (89)
12 2e9j_A Filamin-B; beta-sandwic 88.6 1.1 3.7E-05 32.7 6.2 47 80-126 51-100 (119)
13 3rgh_A Filamin-A; cell adhesio 88.5 1.4 4.7E-05 31.1 6.5 44 81-124 37-83 (100)
14 4g9s_B Inhibitor of G-type lys 87.9 2.8 9.6E-05 30.1 8.0 90 46-140 15-108 (111)
15 2d7p_A Filamin-C; beta-sandwic 86.4 2.6 8.8E-05 30.4 7.0 44 83-126 41-87 (112)
16 2dia_A Filamin-B; beta-sandwic 85.0 2.5 8.6E-05 30.3 6.4 46 81-126 40-88 (113)
17 2k9u_A Gamma filamin; cytoskel 84.6 7.6 0.00026 28.0 9.0 45 81-126 47-93 (119)
18 2ee6_A Filamin-B; beta-sandwic 84.3 1.9 6.4E-05 30.6 5.3 43 82-125 41-85 (105)
19 2w0p_A Filamin-A; alternative 84.2 4 0.00014 28.2 7.0 43 82-125 33-77 (94)
20 2dic_A Filamin-B; beta-sandwic 82.9 2.8 9.5E-05 29.7 5.8 43 82-125 41-85 (105)
21 2eea_A Filamin-B; beta-sandwic 82.6 7.2 0.00025 27.9 8.0 43 82-125 51-95 (115)
22 4b7l_A Filamin-B; structural p 82.5 2.5 8.5E-05 36.8 6.4 74 52-125 251-334 (347)
23 2bp3_A Filamin A; structural p 82.0 4 0.00014 28.3 6.2 42 83-125 37-80 (97)
24 1v05_A Filamin C; actin-bindin 80.5 5.4 0.00018 27.5 6.5 45 82-126 36-83 (96)
25 3c12_A FLGD, flagellar protein 77.7 12 0.00042 27.7 8.1 53 71-125 29-92 (138)
26 2nqc_A Filamin-C; immunoglobul 76.7 16 0.00054 27.3 8.5 45 80-125 73-118 (138)
27 4fxk_A Complement C4 beta chai 75.7 35 0.0012 31.5 12.5 81 46-126 108-202 (656)
28 2dib_A Filamin-B; beta-sandwic 75.2 3.8 0.00013 30.0 4.6 46 82-127 56-104 (128)
29 3d33_A Domain of unknown funct 74.8 21 0.0007 25.6 9.4 56 68-126 37-97 (108)
30 2di9_A Filamin-B; beta-sandwic 74.1 16 0.00055 26.8 7.9 44 82-126 61-106 (131)
31 2k7p_A Filamin-A; IG-like, ABP 74.1 9.6 0.00033 29.8 7.0 45 81-126 126-172 (188)
32 3osv_A Flagellar basal-BODY RO 73.7 16 0.00055 27.1 7.8 57 69-126 24-91 (138)
33 3isy_A Bsupi, intracellular pr 73.4 14 0.00048 27.0 7.1 58 67-124 16-88 (120)
34 2ds4_A Tripartite motif protei 73.0 13 0.00045 26.1 6.9 43 84-126 50-97 (113)
35 2di8_A Filamin-B; beta-sandwic 73.0 16 0.00055 25.9 7.4 43 83-126 42-86 (111)
36 2k7p_A Filamin-A; IG-like, ABP 72.1 11 0.00037 29.6 6.8 45 82-126 33-80 (188)
37 2d7o_A Filamin-C; beta-sandwic 71.1 8.6 0.00029 27.4 5.5 43 83-126 42-86 (111)
38 2k8e_A UPF0339 protein YEGP; p 70.9 7.4 0.00025 29.0 5.2 62 65-126 11-90 (130)
39 1gl2_D Syntaxin 8, vesicle tra 69.8 19 0.00064 23.0 6.7 47 157-203 8-54 (65)
40 2eec_A Filamin-B; beta-sandwic 68.2 12 0.00042 27.3 5.9 45 81-126 50-95 (125)
41 2nps_D Syntaxin-6; vesicle fus 65.3 28 0.00096 23.3 7.0 48 156-203 17-64 (82)
42 3irp_X URO-adherence factor A; 64.5 7.1 0.00024 35.0 4.7 44 83-126 330-373 (429)
43 3hrz_A Cobra venom factor; ser 63.6 28 0.00094 32.6 8.8 60 67-126 117-183 (627)
44 3sd2_A Putative member of DUF3 63.5 19 0.00065 25.5 5.8 74 47-127 16-92 (101)
45 1qfh_A Protein (gelation facto 61.9 35 0.0012 26.8 8.1 44 82-126 134-180 (212)
46 2k7q_A Filamin-A; IG-like, ABP 61.9 5.7 0.00019 31.2 3.2 46 81-126 29-77 (191)
47 2hr0_A Complement C3 beta chai 61.4 60 0.002 30.1 10.7 59 67-125 119-189 (645)
48 1sfc_D Protein (SNAP-25B), pro 61.0 33 0.0011 23.3 6.7 49 155-203 26-74 (87)
49 2k7q_A Filamin-A; IG-like, ABP 60.6 21 0.00072 27.7 6.4 45 81-126 126-172 (191)
50 3swy_A Cyclic nucleotide-gated 60.6 25 0.00086 21.2 5.9 34 158-191 5-38 (46)
51 4hci_A Cupredoxin 1; structura 60.0 25 0.00086 24.0 6.1 69 46-121 13-85 (100)
52 1n7s_D SNAP-25A; neuronal snar 59.7 31 0.0011 22.0 6.7 48 156-203 8-55 (66)
53 1jcd_A Major outer membrane li 56.6 32 0.0011 21.2 6.7 21 159-179 12-32 (52)
54 2pn5_A TEP1R, thioester-contai 55.5 1.1E+02 0.0038 31.0 12.2 77 49-125 91-184 (1325)
55 3swf_A CGMP-gated cation chann 55.2 39 0.0013 22.5 5.8 40 157-196 6-45 (74)
56 3cu7_A Complement C5; Mg domai 54.8 46 0.0016 34.9 9.4 60 67-126 137-207 (1676)
57 2yko_A LINE-1 ORF1P; RNA-bindi 54.4 39 0.0013 27.6 7.0 44 155-198 3-46 (233)
58 1wlh_A Gelation factor; ABP-12 52.9 20 0.00067 30.1 5.3 43 83-126 234-279 (311)
59 2j3s_A Filamin-A; cytoskeleton 52.4 10 0.00035 31.7 3.4 44 82-125 130-176 (288)
60 1qfh_A Protein (gelation facto 51.9 44 0.0015 26.2 7.1 44 83-126 44-90 (212)
61 3hd7_B Syntaxin-1A; membrane p 49.4 67 0.0023 22.7 9.4 18 159-176 22-39 (109)
62 1wlh_A Gelation factor; ABP-12 49.3 28 0.00097 29.1 5.7 44 83-126 143-189 (311)
63 2j3s_A Filamin-A; cytoskeleton 47.5 37 0.0013 28.1 6.2 46 79-125 224-271 (288)
64 3b5n_D Protein transport prote 46.7 55 0.0019 20.9 6.7 49 155-203 7-55 (64)
65 3bid_A UPF0339 protein NMB1088 46.0 29 0.001 22.3 4.1 28 74-101 2-29 (64)
66 1l4a_D S-SNAP25 fusion protein 45.7 47 0.0016 22.6 5.4 48 155-202 27-74 (87)
67 4ani_A Protein GRPE; chaperone 44.4 1E+02 0.0034 24.8 7.9 56 155-210 63-118 (213)
68 2oqq_A Transcription factor HY 40.6 51 0.0017 19.3 4.1 29 157-185 9-37 (42)
69 3prx_B Cobra venom factor; imm 40.6 75 0.0026 33.4 8.2 59 67-125 139-204 (1642)
70 2b39_A C3; thioester, immune d 37.8 86 0.0029 32.8 8.2 59 67-125 140-210 (1661)
71 1qle_D Cytochrome AA3, ccytoch 37.7 63 0.0021 19.0 4.4 28 191-218 13-40 (43)
72 3jqw_A COLH protein, collagena 36.8 1.2E+02 0.004 21.9 9.6 68 55-126 35-105 (121)
73 2k49_A UPF0339 protein SO_3888 36.1 61 0.0021 23.5 5.0 53 73-125 3-73 (118)
74 2xwx_A GBPA, glcnac-binding pr 35.6 2.2E+02 0.0077 24.9 9.4 59 68-126 310-374 (391)
75 2x5p_A FBA2, fibronectin bindi 34.6 33 0.0011 24.9 3.3 53 84-138 44-97 (121)
76 1m56_D Cytochrome C oxidase; m 34.1 81 0.0028 19.3 4.9 29 191-219 21-49 (51)
77 3p6b_A Cellulose 1,4-beta-cell 30.7 2E+02 0.0067 22.6 8.1 48 47-94 75-129 (205)
78 3okq_A BUD site selection prot 30.0 1.7E+02 0.0059 21.8 8.2 55 158-212 68-130 (141)
79 2xr4_A Lectin; sugar binding p 29.2 1.6E+02 0.0055 21.1 7.3 76 59-137 5-82 (116)
80 3gf8_A Putative polysaccharide 28.7 83 0.0028 26.3 5.3 67 60-126 4-86 (296)
81 3swf_A CGMP-gated cation chann 27.8 1.3E+02 0.0046 19.8 5.3 16 162-177 4-19 (74)
82 3e8v_A Possible transglutamina 26.8 56 0.0019 22.2 3.1 19 103-121 39-66 (82)
83 1dip_A Delta-sleep-inducing pe 26.1 1.1E+02 0.0038 20.2 4.4 29 158-186 15-43 (78)
84 2k7i_A UPF0339 protein ATU0232 25.1 53 0.0018 22.3 2.8 31 70-101 21-51 (83)
85 2chh_A Protein RSC3288; lectin 24.9 1.9E+02 0.0066 20.6 6.7 75 58-137 4-80 (114)
86 3u59_A Tropomyosin beta chain; 24.7 1.7E+02 0.006 20.1 7.1 11 193-203 86-96 (101)
87 3hd7_A Vesicle-associated memb 24.4 1.7E+02 0.0058 19.8 10.7 34 172-205 33-66 (91)
88 1iby_A Nitrosocyanin; RED copp 24.2 1.6E+02 0.0054 20.1 5.5 53 64-120 41-93 (112)
89 2bv4_A Lectin CV-IIL; mannose; 23.7 2E+02 0.007 20.5 6.7 74 59-137 4-79 (113)
90 4etp_A Kinesin-like protein KA 23.5 1.8E+02 0.0062 25.4 6.8 33 158-190 10-42 (403)
91 1kd8_B GABH BLL, GCN4 acid bas 22.6 1.1E+02 0.0039 17.2 4.5 24 160-183 3-26 (36)
92 2pnv_A Small conductance calci 22.5 1.1E+02 0.0038 18.0 3.5 23 158-180 16-38 (43)
93 3u1c_A Tropomyosin alpha-1 cha 22.2 2E+02 0.0068 19.9 7.1 10 194-203 87-96 (101)
94 3fn2_A Putative sensor histidi 22.0 67 0.0023 22.7 2.8 32 86-117 51-82 (106)
95 2wra_A Lectin, BCLA; sugar bin 20.7 2.5E+02 0.0085 20.4 6.1 33 57-91 9-41 (128)
96 4acq_A Alpha-2-macroglobulin; 20.7 7.1E+02 0.024 25.7 13.0 60 67-126 117-188 (1451)
97 2r5o_A Putative ATP binding co 20.7 76 0.0026 24.4 3.3 35 66-100 67-104 (188)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=97.20 E-value=0.0064 Score=54.24 Aligned_cols=88 Identities=23% Similarity=0.276 Sum_probs=65.4
Q ss_pred EEEEcCCCcceEEEEcC-CCCEEEEEEEEEeCCCcceEEEEeC-----CC---C--CEEeccee------eccceEEEeC
Q psy5395 50 KIHIDPGKEDCFFQYVN-PGATFYVNFQVLRGGDGMAGFAVRN-----PN---G--QIVHPYEW------KKNAEYQDTP 112 (237)
Q Consensus 50 ~f~l~~g~~~Cf~e~v~-~~~~i~~~y~v~~~~~~~I~v~I~d-----P~---g--~~v~~~~~------~~~g~f~f~~ 112 (237)
++.|.+|+...+-..+. +|+.+...|.+. ..||.|.|+- ++ | ..+..... ..+| ++.+
T Consensus 281 ~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~---~~DI~F~v~~~~~~~~~~~~~~~~~v~p~~r~~~~~~~~~G--~~~~ 355 (403)
T 1olm_A 281 SVQISRGSSHQVEYEILFPGCVLRWQFMSD---GADVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDG--TLTC 355 (403)
T ss_dssp EEEECTTCEEEEEEEECSTTCEEEEEEEES---SSCEEEEEEEC----CCCCGGGSEEEEEEEEECTTTSCEEE--EEEC
T ss_pred EEEEcCCCEEEEEEEEcCCCCEEEEEEEec---CCcEEEEEEEecccccccCCCcceEEeeeeeecCccccccC--EEEc
Confidence 48999999999998886 899999999984 2466677651 11 1 12332211 1244 5779
Q ss_pred CCeeeEEEEEEcCCCCCCCeEEEEEEEEEe
Q psy5395 113 PHGGYYSVCIDNQFSRNAGKLVNMYLTVVR 142 (237)
Q Consensus 113 ~~~G~Y~~Cf~N~~s~~~~k~V~f~i~v~~ 142 (237)
+++|.|.++|+|+.|.+.+|.|.+.+.+..
T Consensus 356 ~~~G~y~l~fdNs~S~~~~k~l~y~v~v~~ 385 (403)
T 1olm_A 356 SDPGIYVLRFDNTYSFIHAKKVNFTVEVLL 385 (403)
T ss_dssp CSCEEEEEEEECTTCCCCSEEEEEEEEEEC
T ss_pred CCCeEEEEEEeccccceeceEEEEEEEEeC
Confidence 999999999999999878899999998864
No 2
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=93.14 E-value=0.6 Score=32.82 Aligned_cols=47 Identities=21% Similarity=0.270 Sum_probs=34.7
Q ss_pred CcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCCCC
Q psy5395 82 DGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQFSR 128 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~s~ 128 (237)
..++.+.|.+|+|+.+... .+..+|.| +|++++.|.|.+++.-....
T Consensus 21 ~~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~~ 70 (93)
T 2d7n_A 21 KGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNH 70 (93)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESSSC
T ss_pred CCCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECCEe
Confidence 4568999999999865543 33556655 67899999999999755443
No 3
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.52 E-value=0.48 Score=33.52 Aligned_cols=47 Identities=21% Similarity=0.186 Sum_probs=35.0
Q ss_pred CCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQFS 127 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~s 127 (237)
+..++.+.|.+|+|+.+... .+..+|.| +|+.++.|.|.+++.-...
T Consensus 28 g~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~ 77 (95)
T 2ee9_A 28 RKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGS 77 (95)
T ss_dssp CTTSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESSC
T ss_pred CCCCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECCE
Confidence 45678999999999866543 23556655 5778999999999975543
No 4
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=91.76 E-value=0.93 Score=32.81 Aligned_cols=47 Identities=19% Similarity=0.375 Sum_probs=33.4
Q ss_pred CCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQFS 127 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~s 127 (237)
+...+.+.|.+|+|+.+... .+..+|.| +|+.++.|.|.+.+.-...
T Consensus 42 G~~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~ 91 (115)
T 2d7m_A 42 GEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGD 91 (115)
T ss_dssp CSSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEESSC
T ss_pred CCCEEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEECCE
Confidence 44568899999998644332 23456665 5788999999999975543
No 5
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=91.59 E-value=0.33 Score=35.51 Aligned_cols=75 Identities=16% Similarity=0.109 Sum_probs=53.5
Q ss_pred eEEEEEcCCCcceEEEEcCCCCEEEEEEEEEeCCCcceEEEEeCCCCCE---EecceeeccceEEEeCCCeeeEEEEEEc
Q psy5395 48 DYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQI---VHPYEWKKNAEYQDTPPHGGYYSVCIDN 124 (237)
Q Consensus 48 ~l~f~l~~g~~~Cf~e~v~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~---v~~~~~~~~g~f~f~~~~~G~Y~~Cf~N 124 (237)
.+.=.|.+++...+...+.+|+.+.+.. ... ..+.+.|.+|+|+. ++..+....+.++-+.+.+|.|.+=+..
T Consensus 19 ~v~G~I~g~~~~~Y~~~a~aGQ~l~V~l--s~~--~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~ 94 (114)
T 4dzg_A 19 QLXGSFTGYDTIHYTLVAXAGQTMTVXI--GGS--SNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQ 94 (114)
T ss_dssp EC-CCCBTTCCEEEECCC-CCCEEEC-C--EES--TTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEEC
T ss_pred EEeEEecCCCceEEEEEecCCCEEEEEe--CCC--CcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEe
Confidence 3444678888899998899999999887 222 34678899999974 3444434456888899999999999987
Q ss_pred CC
Q psy5395 125 QF 126 (237)
Q Consensus 125 ~~ 126 (237)
..
T Consensus 95 ~r 96 (114)
T 4dzg_A 95 MR 96 (114)
T ss_dssp CH
T ss_pred cc
Confidence 63
No 6
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=91.16 E-value=1.2 Score=31.81 Aligned_cols=46 Identities=20% Similarity=0.159 Sum_probs=33.6
Q ss_pred CCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
+...+.+.|.+|+|..+... .+..+|.| +|+.+..|.|.+.+.-..
T Consensus 41 G~~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 89 (108)
T 2dj4_A 41 GLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYAD 89 (108)
T ss_dssp CSCCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEESS
T ss_pred CCceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 44568899999999655443 34566766 577899999999997544
No 7
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=90.91 E-value=1.4 Score=32.43 Aligned_cols=46 Identities=20% Similarity=0.250 Sum_probs=33.3
Q ss_pred CCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
+...+.+.|.+|+|..+... .+..+|.| +|+.+..|.|.+.+.-..
T Consensus 41 G~~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g 89 (124)
T 2dmb_A 41 GKGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGG 89 (124)
T ss_dssp CSCCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESS
T ss_pred CCCcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECC
Confidence 34568899999998654433 23456665 588999999999997544
No 8
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=90.84 E-value=0.46 Score=34.01 Aligned_cols=47 Identities=13% Similarity=0.102 Sum_probs=35.0
Q ss_pred CCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQFS 127 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~s 127 (237)
+..++.+.|.+|+|..+.-. ....+|.| +|++++.|.|.+.+.-...
T Consensus 29 g~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g~ 78 (102)
T 2dlg_A 29 NSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQ 78 (102)
T ss_dssp CGGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSSS
T ss_pred CCCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECCE
Confidence 44678999999999865543 23456666 5789999999999975543
No 9
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=90.42 E-value=3.3 Score=28.90 Aligned_cols=61 Identities=15% Similarity=0.271 Sum_probs=42.3
Q ss_pred CCCCEEEEEEEEEeCC-----CcceEEEEeCCCCCEEeccee--eccceE--EEeC---CCeeeEEEEEEcCC
Q psy5395 66 NPGATFYVNFQVLRGG-----DGMAGFAVRNPNGQIVHPYEW--KKNAEY--QDTP---PHGGYYSVCIDNQF 126 (237)
Q Consensus 66 ~~~~~i~~~y~v~~~~-----~~~I~v~I~dP~g~~v~~~~~--~~~g~f--~f~~---~~~G~Y~~Cf~N~~ 126 (237)
.+|+++++..-+.+.+ ...+.+.|.||+|+.+.++.. ...|.+ .|.. ...|.|++-.....
T Consensus 14 rPGetV~~~~~~~~~~~~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 14 KPGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp CTTCEEEEEEEEECGGGCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CCCCEEEEEEEEECCCCcCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 4788888887766432 223688999999999988632 234544 3443 35799999998753
No 10
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=89.84 E-value=0.53 Score=34.45 Aligned_cols=61 Identities=13% Similarity=0.050 Sum_probs=40.0
Q ss_pred CCCCEEEEEEEEEeCCCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 66 NPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 66 ~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
..|....+.....+.+..++.+.|.+|+|+.+-.. ....+|.| +|+.++.|.|.+.+.-..
T Consensus 28 ~vg~~~~f~v~~~~ag~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~g 91 (116)
T 2dmc_A 28 KLGSAADFLLDISETDLSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNG 91 (116)
T ss_dssp CTTSCEEEECCCSCCCSTTBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBSS
T ss_pred ccCCceEEEEEecCCCCCCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEECC
Confidence 34444444433333445678999999999754432 23456665 688999999999997544
No 11
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=89.13 E-value=1.4 Score=30.18 Aligned_cols=46 Identities=15% Similarity=0.165 Sum_probs=31.5
Q ss_pred CCcceEEEEeCCCCCEEec-ceeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHP-YEWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~-~~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
+...+.+.|.+|+|..+.. -.+..+|.| +|+.++.|.|.+.+.-..
T Consensus 28 G~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 76 (89)
T 3cnk_A 28 GNNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGH 76 (89)
T ss_dssp CSCCEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEETT
T ss_pred CCCcEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEECC
Confidence 3456788889999853222 134556665 578999999999987443
No 12
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.62 E-value=1.1 Score=32.69 Aligned_cols=47 Identities=17% Similarity=0.346 Sum_probs=33.0
Q ss_pred CCCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 80 GGDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 80 ~~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
.+...+.+.|.+|+|..+... .+..+|.| +|+....|.|.+.+.-..
T Consensus 51 aG~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 100 (119)
T 2e9j_A 51 AGEGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGG 100 (119)
T ss_dssp CCCCCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEECCEESS
T ss_pred CCCCeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 345578889999998643332 23556665 577899999999987544
No 13
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=88.52 E-value=1.4 Score=31.10 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=30.5
Q ss_pred CCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEc
Q psy5395 81 GDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDN 124 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N 124 (237)
+...+.+.|.+|+|..+.-. .+..+|.| +|+.+..|.|.+.+.=
T Consensus 37 G~~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~ 83 (100)
T 3rgh_A 37 GSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKY 83 (100)
T ss_dssp CSCCEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEE
T ss_pred CCceEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEE
Confidence 34468889999988644332 34556655 5778899999988753
No 14
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=87.92 E-value=2.8 Score=30.11 Aligned_cols=90 Identities=14% Similarity=0.108 Sum_probs=61.6
Q ss_pred ceeEEEEEcCCCcceEEEEcCCCCEEEEEEEEEeCCCcceEEEEeCCCCCEEecc---eeeccceEEEeCCCeeeEEEEE
Q psy5395 46 AMDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPY---EWKKNAEYQDTPPHGGYYSVCI 122 (237)
Q Consensus 46 ~~~l~f~l~~g~~~Cf~e~v~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~---~~~~~g~f~f~~~~~G~Y~~Cf 122 (237)
...+.=.|.+++...+...+.+|+.+.+... + ....+.|..|.+...... .......++.+.|.+|+|.+=+
T Consensus 15 ~a~v~G~I~g~~~~~Y~~~a~aGQ~l~v~l~--s---~~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y~I~V 89 (111)
T 4g9s_B 15 SAQYSGEIKGYDYDTYTFYAKKGQKVHVSIS--N---EGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRV 89 (111)
T ss_dssp EEEEEEEEETTCCEEEEEEECTTCEEEEEES--C---TTCEEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEEEEEE
T ss_pred CeEEEEEEeCCCceEEEEEecCCCEEEEEEe--c---CCccEEEECCCCccccccccccccCCceEEEEecCCccEEEEE
Confidence 4556778899999999999999999998753 2 234577888977543321 1223445778899999999999
Q ss_pred EcCCCC-CCCeEEEEEEEE
Q psy5395 123 DNQFSR-NAGKLVNMYLTV 140 (237)
Q Consensus 123 ~N~~s~-~~~k~V~f~i~v 140 (237)
....+. ...+...+.+.|
T Consensus 90 ~~~r~~ar~~~~~~Y~L~v 108 (111)
T 4g9s_B 90 LQTRNDARKNKTKKYNVDI 108 (111)
T ss_dssp ECCHHHHHTTCEEEEEEEE
T ss_pred EeccchhccCCCcCEEEEE
Confidence 754321 124566666655
No 15
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=86.45 E-value=2.6 Score=30.44 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=31.7
Q ss_pred cceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 83 GMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 83 ~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
.++.+.|.+|+|..+... .....|.| +|+.++.|.|.+.+.-..
T Consensus 41 g~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~g 87 (112)
T 2d7p_A 41 GVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNG 87 (112)
T ss_dssp SCEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEESS
T ss_pred CCEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEECC
Confidence 468889999999754432 22455655 688999999999887444
No 16
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=85.02 E-value=2.5 Score=30.34 Aligned_cols=46 Identities=20% Similarity=0.344 Sum_probs=32.5
Q ss_pred CCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
+...+.+.|.+|+|..+... .+..+|.| +|+.+..|.|.+.+.-..
T Consensus 40 G~~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 88 (113)
T 2dia_A 40 GPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGG 88 (113)
T ss_dssp CSCCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETT
T ss_pred CCccEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECC
Confidence 44568888888887544332 34566765 578899999999997543
No 17
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=84.64 E-value=7.6 Score=28.01 Aligned_cols=45 Identities=24% Similarity=0.246 Sum_probs=31.5
Q ss_pred CCcceEEEEeCCCCCEEecceeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPYEWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
+...+.+.|.+|.+-.+.- .+..+|.| +|+.+..|.|.+.+.-..
T Consensus 47 g~~~l~v~v~~p~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g 93 (119)
T 2k9u_A 47 GAGGLSIAVEGPSKAEIAF-EDRKDGSCGVSYVVQEPGDYEVSIKFND 93 (119)
T ss_dssp CSEEEEEEEESSSCCEEEE-ECCSSSEEEEEEECCSSEEEEEEEEETS
T ss_pred CCCcEEEEEeCCCCCeEEE-EECCCCEEEEEEEECCCceEEEEEEECC
Confidence 4456888889998843322 34556655 688999999999997443
No 18
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.26 E-value=1.9 Score=30.61 Aligned_cols=43 Identities=23% Similarity=0.324 Sum_probs=30.9
Q ss_pred CcceEEEEeCCCCCEEecceeeccce--EEEeCCCeeeEEEEEEcC
Q psy5395 82 DGMAGFAVRNPNGQIVHPYEWKKNAE--YQDTPPHGGYYSVCIDNQ 125 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~~~~~~~g~--f~f~~~~~G~Y~~Cf~N~ 125 (237)
...+.+.|.+|.+..+ +-.+..+|. .+|+.+..|.|.+.+.-.
T Consensus 41 ~~~l~v~v~~p~~~~v-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2ee6_A 41 AGGLSIAVEGPSKAEI-TFDDHKNGSCGVSYIAQEPGNYEVSIKFN 85 (105)
T ss_dssp CCCEEEEEESSSCEEE-EECCCCSSCCCEEEEESSCEEEEEEEEET
T ss_pred CCcEEEEEECCCCCEE-EEEECCCCEEEEEEEECCCceEEEEEEEC
Confidence 3467888899988655 223455564 578889999999999744
No 19
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=84.24 E-value=4 Score=28.16 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=30.0
Q ss_pred CcceEEEEeCCCCCEEecceeeccceE--EEeCCCeeeEEEEEEcC
Q psy5395 82 DGMAGFAVRNPNGQIVHPYEWKKNAEY--QDTPPHGGYYSVCIDNQ 125 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~ 125 (237)
...+.+.|.+|.+..+.- .+..+|.| +|+.+..|.|.+.+.-.
T Consensus 33 ~~~~~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 77 (94)
T 2w0p_A 33 AGGLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKFN 77 (94)
T ss_dssp SCCEEEEEEESSCCEEEE-EECTTSCEEEEEECSSCEEEEEEEEET
T ss_pred CCcEEEEEECCCCCeEEE-EECCCCEEEEEEEECCCceEEEEEEEC
Confidence 345677888888854432 33556655 68889999999999744
No 20
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=82.85 E-value=2.8 Score=29.71 Aligned_cols=43 Identities=23% Similarity=0.266 Sum_probs=30.1
Q ss_pred CcceEEEEeCCCCCEEecceeeccceE--EEeCCCeeeEEEEEEcC
Q psy5395 82 DGMAGFAVRNPNGQIVHPYEWKKNAEY--QDTPPHGGYYSVCIDNQ 125 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~ 125 (237)
...+.+.|.+|.+..+.- .+..+|.| +|+.+..|.|.+.+.-.
T Consensus 41 ~g~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2dic_A 41 IGGLGITVEGPSESKINC-RDNKDGSCSAEYIPFAPGDYDVNITYG 85 (105)
T ss_dssp SSCEEEEEESSSCCCCEE-EECSSSCEEEEECCSSCEEEEEEEEET
T ss_pred CCceEEEEECCCCCeEEE-EECCCCeEEEEEEeCCCeEEEEEEEEC
Confidence 345778888998754432 23556654 68889999999999744
No 21
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.56 E-value=7.2 Score=27.93 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=31.3
Q ss_pred CcceEEEEeCCCCCEEecceeeccceE--EEeCCCeeeEEEEEEcC
Q psy5395 82 DGMAGFAVRNPNGQIVHPYEWKKNAEY--QDTPPHGGYYSVCIDNQ 125 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~ 125 (237)
...+.+.|.+|.+..+. -.+..+|.| +|+.+..|.|.+.+.=.
T Consensus 51 ~~~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 95 (115)
T 2eea_A 51 EGGLDLAIEGPSKAEIS-CIDNKDGTCTVTYLPTLPGDYSILVKYN 95 (115)
T ss_dssp SSCEEEEEESSSCCEEC-CBCCSSSEEEEEEECSSCSCEEEEEEES
T ss_pred CCceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 45688899999985443 234566754 68889999999998743
No 22
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=82.51 E-value=2.5 Score=36.84 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=46.7
Q ss_pred EEcCCCcceEEEEcC-----CCCEEEEEEEEEeCCCcceEEEEeCCCCCEEecc---eeeccceE--EEeCCCeeeEEEE
Q psy5395 52 HIDPGKEDCFFQYVN-----PGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPY---EWKKNAEY--QDTPPHGGYYSVC 121 (237)
Q Consensus 52 ~l~~g~~~Cf~e~v~-----~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~---~~~~~g~f--~f~~~~~G~Y~~C 121 (237)
..+|.+-+|+.--+. .|....+.....+.|..++.+.|.+|+|..+... ....+|.| +|++++.|.|.+-
T Consensus 251 k~~pskv~a~GpGle~~g~~vg~p~~F~Vdt~~AG~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~P~~~G~~~I~ 330 (347)
T 4b7l_A 251 KLNPKKARAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVT 330 (347)
T ss_dssp SCCGGGCEEESGGGSSSCCCTTSCEEEEEECTTTCSCCEEEEEECTTSCEEECEEEESSTTCSEEEEEECCCSSSEEEEE
T ss_pred cccccceeEEeccccccCceeCCEEEEEEEeCCCCCCceEEEEECCCCCeecCEEEEEcCCCCEEEEEEEECCCEeEEEE
Confidence 345555566554443 2444444434444566789999999999765432 22345655 6889999999988
Q ss_pred EEcC
Q psy5395 122 IDNQ 125 (237)
Q Consensus 122 f~N~ 125 (237)
+.-.
T Consensus 331 V~~~ 334 (347)
T 4b7l_A 331 VLFA 334 (347)
T ss_dssp EEET
T ss_pred EEEC
Confidence 8644
No 23
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=81.98 E-value=4 Score=28.31 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=29.2
Q ss_pred cceEEEEeCCCCCEEecceeeccceE--EEeCCCeeeEEEEEEcC
Q psy5395 83 GMAGFAVRNPNGQIVHPYEWKKNAEY--QDTPPHGGYYSVCIDNQ 125 (237)
Q Consensus 83 ~~I~v~I~dP~g~~v~~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~ 125 (237)
..+.+.|.+|.+..+.- .+..+|.| +|+.+..|.|.+.+.=.
T Consensus 37 ~~l~v~v~~p~~~~~~v-~d~~dGty~v~Y~p~~~G~y~i~V~~~ 80 (97)
T 2bp3_A 37 GGLSLAIEGPSKAEISC-TDNQDGTCSVSYLPVLPGDYSILVKYN 80 (97)
T ss_dssp EEEEEEEEESSCCEEEE-EECSSSEEEEEEECSSCEEEEEEEEET
T ss_pred CcEEEEEECCCCCEEEE-EECCCCEEEEEEEeCCCCcEEEEEEEC
Confidence 45777888888754432 33556654 67889999999998743
No 24
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=80.45 E-value=5.4 Score=27.54 Aligned_cols=45 Identities=18% Similarity=0.118 Sum_probs=30.6
Q ss_pred CcceEEEEeCCCCCEEec-ceeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 82 DGMAGFAVRNPNGQIVHP-YEWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~-~~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
...+.+.|.+|+|..+.. -.+..+|.| +|+.++.|.|.+.+.-..
T Consensus 36 ~~~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 83 (96)
T 1v05_A 36 TNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGD 83 (96)
T ss_dssp SCCEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 446788889998853211 133556665 577899999999887443
No 25
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=77.68 E-value=12 Score=27.69 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=37.4
Q ss_pred EEEEEEEEeCCCcceEEEEeCCCCCEEecce--eeccceEEEeCC---------CeeeEEEEEEcC
Q psy5395 71 FYVNFQVLRGGDGMAGFAVRNPNGQIVHPYE--WKKNAEYQDTPP---------HGGYYSVCIDNQ 125 (237)
Q Consensus 71 i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~--~~~~g~f~f~~~---------~~G~Y~~Cf~N~ 125 (237)
..+.|. . .....+.+.|+|.+|++|.+-+ ..+.|.+.|.-. .+|.|++.+.-.
T Consensus 29 ~~~~~~-~-~~a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 29 AKGVVA-A-TSAGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp EEEEEE-E-SSSEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred EEEEEe-c-CCCCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 456666 4 3345789999999999998754 345666666521 368999999754
No 26
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=76.73 E-value=16 Score=27.27 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=32.0
Q ss_pred CCCcceEEEEeCCCCCEEecceeeccc-eEEEeCCCeeeEEEEEEcC
Q psy5395 80 GGDGMAGFAVRNPNGQIVHPYEWKKNA-EYQDTPPHGGYYSVCIDNQ 125 (237)
Q Consensus 80 ~~~~~I~v~I~dP~g~~v~~~~~~~~g-~f~f~~~~~G~Y~~Cf~N~ 125 (237)
.+...+.+.|.+|++..+.-. +..+| ..+|+..+.|.|.+-+.-.
T Consensus 73 aG~g~l~v~I~gPs~~~~~~~-d~~dGy~V~YtP~~~G~y~I~Vk~~ 118 (138)
T 2nqc_A 73 AGSGALSVTIDGPSKVQLDCR-ECPEGHVVTYTPMAPGNYLIAIKYG 118 (138)
T ss_dssp SCSCCEEEEEESSSCCEEEEE-EETTEEEEEEECCSCEEEEEEEEES
T ss_pred CCCCcEEEEEECCCCCeeeEE-ECCCcEEEEEEcCCCEEEEEEEEEC
Confidence 344578999999998755433 34556 3357889999999988733
No 27
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=75.75 E-value=35 Score=31.46 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=53.8
Q ss_pred ceeEEEEEcCCCcceEEE--Ec--CCCCEEEEEEEEEeCC----CcceEEEEeCCCCCEEeccee-eccceEE--EeC--
Q psy5395 46 AMDYKIHIDPGKEDCFFQ--YV--NPGATFYVNFQVLRGG----DGMAGFAVRNPNGQIVHPYEW-KKNAEYQ--DTP-- 112 (237)
Q Consensus 46 ~~~l~f~l~~g~~~Cf~e--~v--~~~~~i~~~y~v~~~~----~~~I~v~I~dP~g~~v~~~~~-~~~g~f~--f~~-- 112 (237)
.....+.+....--.|.. .- .+|+++++..-+.+.+ ...+.+.|.||+|+.+.++.. ...|-|. |..
T Consensus 108 ~~~~~v~~~~~~~~vFIqTDr~iYrPGqtV~~r~i~~d~~~~p~~~~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~ 187 (656)
T 4fxk_A 108 IQGINLLFSSRRGHLFLQTDQPIYNPGQRVRYRVFALDQKMRPSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPD 187 (656)
T ss_dssp CEEEEEEECCCCSEEEEEESCSEECTTCEEEEEEEEECSSSSBCCCCEEEEEECTTCCEEEEEEECCTTSEEEEEEECCT
T ss_pred eeeeEEEEeccCccEEEECCCCCcCCCCEEEEEEEEECCccCcCcccceEEEECCCCcEEeeeEEecCCceEEEEecCCC
Confidence 345556666666666632 22 4899999887666532 346889999999999987642 2345443 432
Q ss_pred -CCeeeEEEEEEcCC
Q psy5395 113 -PHGGYYSVCIDNQF 126 (237)
Q Consensus 113 -~~~G~Y~~Cf~N~~ 126 (237)
...|.|++-+....
T Consensus 188 ~~~~G~w~i~v~~~~ 202 (656)
T 4fxk_A 188 ISEPGTWKISARFSD 202 (656)
T ss_dssp TCCSEEEEEEEEESS
T ss_pred CCCCcCEEEEEEEcC
Confidence 45799999997543
No 28
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=75.23 E-value=3.8 Score=29.97 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=32.8
Q ss_pred CcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCCC
Q psy5395 82 DGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQFS 127 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~s 127 (237)
...+.+.|.+|+|..+.-. .+..+|.| +|+..+.|.|.+.+.-...
T Consensus 56 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~g~ 104 (128)
T 2dib_A 56 GDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDV 104 (128)
T ss_dssp CSCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSSSC
T ss_pred CccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEECCE
Confidence 3468889999998644332 33556666 5788999999999975543
No 29
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=74.85 E-value=21 Score=25.61 Aligned_cols=56 Identities=13% Similarity=0.019 Sum_probs=41.3
Q ss_pred CCEEEEEEEEEeCCCcceEEEEe-CCCCCEEecceeecc--ceEEEe--CCCeeeEEEEEEcCC
Q psy5395 68 GATFYVNFQVLRGGDGMAGFAVR-NPNGQIVHPYEWKKN--AEYQDT--PPHGGYYSVCIDNQF 126 (237)
Q Consensus 68 ~~~i~~~y~v~~~~~~~I~v~I~-dP~g~~v~~~~~~~~--g~f~f~--~~~~G~Y~~Cf~N~~ 126 (237)
|..+.+.|... ..++.+.|+ |.+|++||+..-... ..+.+. ....|.|.+=+.+..
T Consensus 37 ~~~L~I~F~~~---~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~ 97 (108)
T 3d33_A 37 GYLLTLKNASP---DRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTP 97 (108)
T ss_dssp TTEEEEEESSC---CSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEES
T ss_pred CCEEEEEECCc---CCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCC
Confidence 66788887432 457999999 889999999764333 345555 457999999999883
No 30
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=74.15 E-value=16 Score=26.77 Aligned_cols=44 Identities=20% Similarity=0.178 Sum_probs=31.3
Q ss_pred CcceEEEEeCCCCCEEecceeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 82 DGMAGFAVRNPNGQIVHPYEWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
...+.+.|.+|.+..+.- .+..+|.| +|+.+..|.|.+.+.=..
T Consensus 61 ~~~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g 106 (131)
T 2di9_A 61 TGGLGLTVEGPCEAKIEC-SDNGDGTCSVSYLPTKPGEYFVNILFEE 106 (131)
T ss_dssp SSCEEEEECSSSCCEEEE-EECSSSEEEEEEECSSSSEEEEEEEESS
T ss_pred CCeeEEEEEecCCceEEE-EECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 456788889998854432 34556765 578899999999997443
No 31
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=74.07 E-value=9.6 Score=29.84 Aligned_cols=45 Identities=18% Similarity=0.265 Sum_probs=32.8
Q ss_pred CCcceEEEEeCCCCCEEecceeeccce--EEEeCCCeeeEEEEEEcCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPYEWKKNAE--YQDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~~~~~~g~--f~f~~~~~G~Y~~Cf~N~~ 126 (237)
+...+.+.|.+|.+..+.- .+..+|. .+|+....|.|.+++.-..
T Consensus 126 g~g~l~v~I~gp~~~~~~~-~d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (188)
T 2k7p_A 126 GEGGLSLAIEGPSKAEISC-TDNQDGTCSVSYLPVLPGDYSILVKYNE 172 (188)
T ss_dssp CSSCEEEEEECSSCCEEEE-EECTTSEEEEEEECCSSEEEEEEEEETT
T ss_pred CCCCeEEEEeCCCCCeEEE-EECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 3456889999998855432 3456674 5788999999999997443
No 32
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=73.67 E-value=16 Score=27.08 Aligned_cols=57 Identities=12% Similarity=0.090 Sum_probs=39.9
Q ss_pred CEEEEEEEEEeCCCcceEEEEeCCCCCEEecce--eeccceEEEeC---------CCeeeEEEEEEcCC
Q psy5395 69 ATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYE--WKKNAEYQDTP---------PHGGYYSVCIDNQF 126 (237)
Q Consensus 69 ~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~--~~~~g~f~f~~---------~~~G~Y~~Cf~N~~ 126 (237)
..+.+.|.+..+ ...+.+.|+|.+|++|.+.. ..+.|.+.|.- -.+|.|.+-+.-..
T Consensus 24 ~~~~~~~~l~~~-a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~~ 91 (138)
T 3osv_A 24 DTFKASLNLPVS-SSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTSI 91 (138)
T ss_dssp SCEEEEEEESBC-EEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEEE
T ss_pred CeEEEEEECCCC-CcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEEc
Confidence 346777777543 34689999999999998854 34667666652 23788999886553
No 33
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=73.40 E-value=14 Score=27.05 Aligned_cols=58 Identities=7% Similarity=-0.052 Sum_probs=35.5
Q ss_pred CCCEEEEEEEEEeCC----------CcceEEEEeCCCCCEEeccee-----eccceEEEeCCCeeeEEEEEEc
Q psy5395 67 PGATFYVNFQVLRGG----------DGMAGFAVRNPNGQIVHPYEW-----KKNAEYQDTPPHGGYYSVCIDN 124 (237)
Q Consensus 67 ~~~~i~~~y~v~~~~----------~~~I~v~I~dP~g~~v~~~~~-----~~~g~f~f~~~~~G~Y~~Cf~N 124 (237)
+|..+.+.+.+...+ ....++.|+|++|+.|+.+.. ..-+..++.+.+.=.|+.=+++
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKE 88 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESS
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCC
Confidence 555666666665432 134688999999999997532 1234445555555556666654
No 34
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.02 E-value=13 Score=26.06 Aligned_cols=43 Identities=23% Similarity=0.211 Sum_probs=27.8
Q ss_pred ceEEEEeCCCC--CEEe-cceeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 84 MAGFAVRNPNG--QIVH-PYEWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 84 ~I~v~I~dP~g--~~v~-~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
.+.+.|.+|++ ..+. .-.+..+|.| +|+....|.|.+++.-..
T Consensus 50 ~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~g 97 (113)
T 2ds4_A 50 NVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKE 97 (113)
T ss_dssp CEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEESS
T ss_pred eEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence 47777777775 2111 1233455655 577899999999987554
No 35
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=72.99 E-value=16 Score=25.95 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=29.8
Q ss_pred cceEEEEeCCCCCEEecceeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 83 GMAGFAVRNPNGQIVHPYEWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 83 ~~I~v~I~dP~g~~v~~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
..+.+.|.+|.+-.+.- .+..+|.| +|+++..|.|.+.+.=..
T Consensus 42 g~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g 86 (111)
T 2di8_A 42 GGISLAVEGPSKVDIQT-EDLEDGTCKVSYFPTVPGVYIVSTKFAD 86 (111)
T ss_dssp CCEEEEEESSSCCCEEC-CBCTTSCEEEEECCCSCSEEEEEEEESS
T ss_pred CceEEEEEcCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence 45678888998754432 33556654 688899999999987443
No 36
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=72.10 E-value=11 Score=29.55 Aligned_cols=45 Identities=22% Similarity=0.313 Sum_probs=33.6
Q ss_pred CcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 82 DGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
..++.+.|.+|+|+...-. .+..+|.| +|+..+.|.|.+.+.-..
T Consensus 33 ~~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g 80 (188)
T 2k7p_A 33 KGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDN 80 (188)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETT
T ss_pred CceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECC
Confidence 3568899999999866533 23556755 688999999999997653
No 37
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=71.07 E-value=8.6 Score=27.42 Aligned_cols=43 Identities=21% Similarity=0.238 Sum_probs=29.9
Q ss_pred cceEEEEeCCCCCEEecceeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 83 GMAGFAVRNPNGQIVHPYEWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 83 ~~I~v~I~dP~g~~v~~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
..+.+.|.+|.+..+.- .+..+|.| +|+.+..|.|.+.+.=..
T Consensus 42 ~~l~v~v~gp~~~~~~v-~d~~dGty~V~Y~p~~~G~y~I~V~~~g 86 (111)
T 2d7o_A 42 GGLSLAVEGPSKAEITC-KDNKDGTCTVSYLPTAPGDYSIIVRFDD 86 (111)
T ss_dssp SCBCCEEESSSCCCBCC-CCCSSSEEEEEECCSSCEEEEEECBBSS
T ss_pred CcEEEEEECCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence 45677888998653322 34566755 588899999999997443
No 38
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=70.88 E-value=7.4 Score=28.96 Aligned_cols=62 Identities=16% Similarity=0.309 Sum_probs=46.2
Q ss_pred cCCCCEEEEEEEEEeCCCcceEEEEeCCCCCEEeccee------------------eccceEEEeCCCeeeEEEEEEcCC
Q psy5395 65 VNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEW------------------KKNAEYQDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 65 v~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~~------------------~~~g~f~f~~~~~G~Y~~Cf~N~~ 126 (237)
..+|.++.+.|++..+.+....+.++.++|++|...+. .....|.......|.|.+-+....
T Consensus 11 ~~~~~~Mag~FEi~~~~~G~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~Lka~N 90 (130)
T 2k8e_A 11 FNQGVIMAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAAN 90 (130)
T ss_dssp ---CCCCCCEEEEEECTTCCEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEEECTT
T ss_pred cCccceeeeeEEEEEcCCCCEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEEEeCC
Confidence 45677778899998877777899999999999986531 134567777777889988888774
No 39
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=69.80 E-value=19 Score=22.99 Aligned_cols=47 Identities=11% Similarity=0.085 Sum_probs=39.6
Q ss_pred ccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHHhHHH
Q psy5395 157 NVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVM 203 (237)
Q Consensus 157 ~~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~~~~~est~~rv~ 203 (237)
|+.++.|...+.++...-..|-+|...+...-.+....++++..++-
T Consensus 8 D~~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~l~ 54 (65)
T 1gl2_D 8 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 54 (65)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999998888887877777777777753
No 40
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.24 E-value=12 Score=27.31 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=31.1
Q ss_pred CCcceEEEEeCCCCCEEecceeeccc-eEEEeCCCeeeEEEEEEcCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPYEWKKNA-EYQDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~~~~~~g-~f~f~~~~~G~Y~~Cf~N~~ 126 (237)
+...+.+.|.+|++..+--. +..+| ..+|+..+.|.|.+.+.=..
T Consensus 50 G~~~l~v~i~gp~~~~~~~~-d~~dGy~V~Y~P~~~G~y~I~V~~~g 95 (125)
T 2eec_A 50 GPGTLSVTIEGPSKVKMDCQ-ETPEGYKVMYTPMAPGNYLISVKYGG 95 (125)
T ss_dssp CSCCEEEEEESSSCCCCEEE-ECSSSEEEEECCSSCEEEEEEEEESS
T ss_pred CCCcEEEEEECCCCCcceeE-ECCCCEEEEEEcCCCeEEEEEEEECC
Confidence 44568899999988644332 34566 23577899999999987433
No 41
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=65.27 E-value=28 Score=23.34 Aligned_cols=48 Identities=8% Similarity=-0.047 Sum_probs=39.3
Q ss_pred hccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHHhHHH
Q psy5395 156 LNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVM 203 (237)
Q Consensus 156 l~~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~~~~~est~~rv~ 203 (237)
.|+.++.|...|.++...-..|-+|...+..--+..-..++++..++-
T Consensus 17 QD~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L~ 64 (82)
T 2nps_D 17 QDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLD 64 (82)
T ss_dssp -CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999999999998888777777777777777653
No 42
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=64.52 E-value=7.1 Score=35.01 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=38.3
Q ss_pred cceEEEEeCCCCCEEecceeeccceEEEeCCCeeeEEEEEEcCC
Q psy5395 83 GMAGFAVRNPNGQIVHPYEWKKNAEYQDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 83 ~~I~v~I~dP~g~~v~~~~~~~~g~f~f~~~~~G~Y~~Cf~N~~ 126 (237)
.++.|.+++|+|.++....-...|.|.|..-.+|.|.+-|..+.
T Consensus 330 ~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~ 373 (429)
T 3irp_X 330 AGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPE 373 (429)
T ss_dssp TTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCT
T ss_pred CCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCC
Confidence 35889999999998888777899999999988999999997663
No 43
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=63.59 E-value=28 Score=32.60 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=39.3
Q ss_pred CCCEEEEEEEEEeCC----CcceEEEEeCCCCCEEecceeec--cceEEEeC-CCeeeEEEEEEcCC
Q psy5395 67 PGATFYVNFQVLRGG----DGMAGFAVRNPNGQIVHPYEWKK--NAEYQDTP-PHGGYYSVCIDNQF 126 (237)
Q Consensus 67 ~~~~i~~~y~v~~~~----~~~I~v~I~dP~g~~v~~~~~~~--~g~f~f~~-~~~G~Y~~Cf~N~~ 126 (237)
+|+++++..-+.+.+ ...+.+.|.||+|+.+..+.-.. ++.|.... ...|.|++......
T Consensus 117 PGqtV~~r~i~~d~~~~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~~ 183 (627)
T 3hrz_A 117 PGSPVLYRVFSMDHNTSKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEH 183 (627)
T ss_dssp TTCEECEEEEESCC-------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEETT
T ss_pred CCCEEEEEEEEECCCCcccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEECC
Confidence 688888876665432 24588999999999998644222 22333322 35899999998553
No 44
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=63.49 E-value=19 Score=25.53 Aligned_cols=74 Identities=23% Similarity=0.257 Sum_probs=49.6
Q ss_pred eeEEEEEcCCCcceEEEEcCCCCEEEEEEEEEeCCCcceEEEEeCC-CCCEEecceeeccceEEEe--CCCeeeEEEEEE
Q psy5395 47 MDYKIHIDPGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNP-NGQIVHPYEWKKNAEYQDT--PPHGGYYSVCID 123 (237)
Q Consensus 47 ~~l~f~l~~g~~~Cf~e~v~~~~~i~~~y~v~~~~~~~I~v~I~dP-~g~~v~~~~~~~~g~f~f~--~~~~G~Y~~Cf~ 123 (237)
..-.+-+.|-.++|-+.+ | .+.+.|.-. ...+.++|.|- +|++||+.....-...++. ....|+|.+=+.
T Consensus 16 ~~rsI~i~P~~~~~A~I~---n-vlsV~F~~~---~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~ 88 (101)
T 3sd2_A 16 NPMGIPIQPTYEKCAILS---N-ILNVSFGRA---KDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHII 88 (101)
T ss_dssp CCCCCCCCCSSEEEEEET---T-EEEEEESSC---CSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEE
T ss_pred ccceeeecccccccEEEe---C-EEEEEeccC---CCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEE
Confidence 334445566666777732 3 777777632 34688999986 7999999764444445544 466999999887
Q ss_pred cCCC
Q psy5395 124 NQFS 127 (237)
Q Consensus 124 N~~s 127 (237)
-...
T Consensus 89 ~~~~ 92 (101)
T 3sd2_A 89 LNDC 92 (101)
T ss_dssp ETTE
T ss_pred eCCc
Confidence 6653
No 45
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=61.94 E-value=35 Score=26.79 Aligned_cols=44 Identities=9% Similarity=0.053 Sum_probs=31.9
Q ss_pred CcceEEEEeCCCCCEEec-ceeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 82 DGMAGFAVRNPNGQIVHP-YEWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~-~~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
...+.+.|.+|+| .+.. -.+..+|.| +|+....|.|.+++.-..
T Consensus 134 ~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g 180 (212)
T 1qfh_A 134 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNG 180 (212)
T ss_dssp CCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETT
T ss_pred CCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECC
Confidence 3468999999999 3322 234567755 688899999999997554
No 46
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=61.91 E-value=5.7 Score=31.15 Aligned_cols=46 Identities=15% Similarity=0.082 Sum_probs=33.7
Q ss_pred CCcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
+..++.+.|.+|+|+.+.-. ....+|.| .|+..+.|.|.+-+....
T Consensus 29 ~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g 77 (191)
T 2k7q_A 29 DLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNG 77 (191)
T ss_dssp CSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETT
T ss_pred CCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECC
Confidence 44578999999999865443 23455544 688999999998887654
No 47
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=61.42 E-value=60 Score=30.11 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=42.4
Q ss_pred CCCEEEEEEEEEeCC----CcceEEEEeCCCCCEEecceee---ccceE--EEeC---CCeeeEEEEEEcC
Q psy5395 67 PGATFYVNFQVLRGG----DGMAGFAVRNPNGQIVHPYEWK---KNAEY--QDTP---PHGGYYSVCIDNQ 125 (237)
Q Consensus 67 ~~~~i~~~y~v~~~~----~~~I~v~I~dP~g~~v~~~~~~---~~g~f--~f~~---~~~G~Y~~Cf~N~ 125 (237)
+|++|++..-+.+.+ ...+.+.|.||+|+.+.+.... ..|-+ +|.. ...|.|++-+...
T Consensus 119 PGqtV~~r~i~~d~~~~p~~~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 119 PGSTVLYRIFTVNHKLLPVGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TTSEEEEEEEEECTTSCBCCCEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCCEEEEEEEEECCCCcccCceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 789998887766532 2358999999999999875433 45654 3443 3589999999864
No 48
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=61.04 E-value=33 Score=23.33 Aligned_cols=49 Identities=4% Similarity=0.089 Sum_probs=41.4
Q ss_pred hhccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHHhHHH
Q psy5395 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVM 203 (237)
Q Consensus 155 ~l~~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~~~~~est~~rv~ 203 (237)
+.++.++.|...+.+|...-..|-.|...+...-.+....++++..|+-
T Consensus 26 eqD~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl~ 74 (87)
T 1sfc_D 26 EMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 74 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3456899999999999999999999999888888888888888877753
No 49
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=60.59 E-value=21 Score=27.75 Aligned_cols=45 Identities=18% Similarity=0.235 Sum_probs=32.0
Q ss_pred CCcceEEEEeCCCCCEEecceeeccc--eEEEeCCCeeeEEEEEEcCC
Q psy5395 81 GDGMAGFAVRNPNGQIVHPYEWKKNA--EYQDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 81 ~~~~I~v~I~dP~g~~v~~~~~~~~g--~f~f~~~~~G~Y~~Cf~N~~ 126 (237)
+...+.+.|.+|.+..+.- .+..+| ..+|+++..|.|.+++.-..
T Consensus 126 g~g~l~v~V~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (191)
T 2k7q_A 126 GYGGLSLSIEGPSKVDINT-EDLEDGTCRVTYCPTEPGNYIINIKFAD 172 (191)
T ss_dssp CSEEEEEEEEESSCEEEEE-EECTTSCEEEEEEESSCEEEEEEEEETT
T ss_pred CCCceEEEEECCCCceEEE-EECCCCEEEEEEEeCCCceEEEEEEECC
Confidence 4456888888998754422 345666 45788999999999997543
No 50
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=60.57 E-value=25 Score=21.17 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=24.2
Q ss_pred cchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5395 158 VSVQNFTDSVRTVERNINEILQQQYHARSREARD 191 (237)
Q Consensus 158 ~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~ 191 (237)
++++.++..++.|+.++..+..|..-.+.+-...
T Consensus 5 ekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqR 38 (46)
T 3swy_A 5 EKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQR 38 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888888888888888877766555444433
No 51
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=60.00 E-value=25 Score=24.01 Aligned_cols=69 Identities=14% Similarity=0.233 Sum_probs=35.7
Q ss_pred ceeEEEEEcCCCcceEE---EEcCCCCEEEEEEEEEeCCCcceEEEEeCCCCCEEecceeeccceEEEeCCCeeeEEE-E
Q psy5395 46 AMDYKIHIDPGKEDCFF---QYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAEYQDTPPHGGYYSV-C 121 (237)
Q Consensus 46 ~~~l~f~l~~g~~~Cf~---e~v~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~~~~~g~f~f~~~~~G~Y~~-C 121 (237)
+..+.+++... +|. ..+++|+++.+.+.-. +...=.+.+.+...+.... ......++|+..+.|.|.+ |
T Consensus 13 ~~~v~V~~~~~---~F~P~~i~v~~G~tV~~~~~n~--d~~~H~~~~~~~~~~~~~~--pg~~~~~~~t~~~~G~Y~y~C 85 (100)
T 4hci_A 13 AKVIEVELNDD---YFNPNVITIPINESTTLLLKNK--GKSEHTFTIKKLGIDVVVE--SGKEKNITVKPKSAGTYELIC 85 (100)
T ss_dssp -CCEEEEEETT---EEESSEEEECTTSCEEEEEEEC--SSSCEEEEEGGGTEEEEEC--TTCEEEEEECCCSCEEEEEEC
T ss_pred CcEEEEEEECC---EEeCCEEEECCCCEEEEEEEcC--CCceEEEEEecCCcceeec--CCcceeEEEecccCceEEEEC
Confidence 34455555432 443 4567888887765422 2111234443322222211 1234567888899999864 6
No 52
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=59.70 E-value=31 Score=21.97 Aligned_cols=48 Identities=4% Similarity=0.072 Sum_probs=40.0
Q ss_pred hccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHHhHHH
Q psy5395 156 LNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVM 203 (237)
Q Consensus 156 l~~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~~~~~est~~rv~ 203 (237)
.++.++.|...+.++...-..|-.|...+...-.+....++++..++-
T Consensus 8 qD~~Ld~L~~~v~~lk~la~~ig~El~~Qn~~Ld~l~~~~d~~~~~l~ 55 (66)
T 1n7s_D 8 MDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 55 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 456789999999999999999999998888888888777777777753
No 53
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=56.64 E-value=32 Score=21.23 Aligned_cols=21 Identities=10% Similarity=0.075 Sum_probs=9.0
Q ss_pred chHhHHHHHHHHHHHHHHHHH
Q psy5395 159 SVQNFTDSVRTVERNINEILQ 179 (237)
Q Consensus 159 ~i~~l~~~i~~l~~~l~~i~~ 179 (237)
+++.|..+++.|...+..+..
T Consensus 12 ~V~~L~~kVdqLssdV~al~~ 32 (52)
T 1jcd_A 12 DAQTANAKADQASNDANAARS 32 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444433
No 54
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=55.51 E-value=1.1e+02 Score=31.01 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=50.7
Q ss_pred EEEEEcCCCcceEEEEc----CCCCEEEEEEEEEeCCC------cceEEEEeCCCCCEEecceee--ccceE--EEeC--
Q psy5395 49 YKIHIDPGKEDCFFQYV----NPGATFYVNFQVLRGGD------GMAGFAVRNPNGQIVHPYEWK--KNAEY--QDTP-- 112 (237)
Q Consensus 49 l~f~l~~g~~~Cf~e~v----~~~~~i~~~y~v~~~~~------~~I~v~I~dP~g~~v~~~~~~--~~g~f--~f~~-- 112 (237)
-.+.+.......|..-= .+|++|++.--+.+.+. ..+.+.|.||+|+.+.++... ..|.+ +|..
T Consensus 91 ~~v~~~~~~~~~fi~TDr~iYrPGqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~ 170 (1325)
T 2pn5_A 91 AELVYLSKSISGLIQVDKPVFKPGDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAP 170 (1325)
T ss_dssp EEEEECSCSEEEEEEESCSEECTTCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCS
T ss_pred EEEEEEcccccEEEecCCCccCCCCEEEEEEEEecCCccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCC
Confidence 34444555555555332 37899888766665321 248899999999999987543 44554 3443
Q ss_pred -CCeeeEEEEEEcC
Q psy5395 113 -PHGGYYSVCIDNQ 125 (237)
Q Consensus 113 -~~~G~Y~~Cf~N~ 125 (237)
...|.|++=....
T Consensus 171 ~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 171 TPMLGVWNISVEVE 184 (1325)
T ss_dssp SCCCEEEEEEEEET
T ss_pred CccccceEEEEEeC
Confidence 3689999999765
No 55
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=55.16 E-value=39 Score=22.48 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=27.9
Q ss_pred ccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy5395 157 NVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLE 196 (237)
Q Consensus 157 ~~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~~~~~e 196 (237)
.++++.|+..++.|+.++..+..+..-.+.+-.+.-..+|
T Consensus 6 EEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE 45 (74)
T 3swf_A 6 EEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVE 45 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888899998888888887776665555444444333
No 56
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=54.79 E-value=46 Score=34.86 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=42.3
Q ss_pred CCCEEEEEEEEEeCC----CcceEEEEeCCCCCEEecceee-ccceEE---EeC---CCeeeEEEEEEcCC
Q psy5395 67 PGATFYVNFQVLRGG----DGMAGFAVRNPNGQIVHPYEWK-KNAEYQ---DTP---PHGGYYSVCIDNQF 126 (237)
Q Consensus 67 ~~~~i~~~y~v~~~~----~~~I~v~I~dP~g~~v~~~~~~-~~g~f~---f~~---~~~G~Y~~Cf~N~~ 126 (237)
+|++|++..-+.+.+ ...+.+.|.||+|+.+.++... ..|-++ |.. ...|.|++=+....
T Consensus 137 PGqtV~~r~i~~d~~~~p~~~~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~ 207 (1676)
T 3cu7_A 137 PDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKE 207 (1676)
T ss_dssp TTCEECEEEEEECTTCSCCCCCEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSS
T ss_pred CCCEEEEEEEEECCCCcccccceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecC
Confidence 578887776665432 2358899999999999887532 456555 232 46899999998754
No 57
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=54.38 E-value=39 Score=27.60 Aligned_cols=44 Identities=23% Similarity=0.302 Sum_probs=27.4
Q ss_pred hhccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhH
Q psy5395 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDN 198 (237)
Q Consensus 155 ~l~~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~~~~~est 198 (237)
.++..++++++.+..|++.+.+|.+...-...|-....+.++..
T Consensus 3 ~lnsRvd~~EErIs~le~rleei~q~eq~~ekrik~ne~sL~dL 46 (233)
T 2yko_A 3 SLRSRCDQLEERVSAAEDEINEIKREGKFREKRIKRNEQSLQEI 46 (233)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888899999999999998766555444444444444433
No 58
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=52.93 E-value=20 Score=30.10 Aligned_cols=43 Identities=9% Similarity=0.049 Sum_probs=31.5
Q ss_pred cceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 83 GMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 83 ~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
..+.+.|.+|+| .+... .+..+|.| +|+....|.|.+++.-..
T Consensus 234 ~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g 279 (311)
T 1wlh_A 234 DKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNG 279 (311)
T ss_dssp SCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETT
T ss_pred CcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECC
Confidence 358889999998 44322 34567764 688899999999998554
No 59
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=52.39 E-value=10 Score=31.70 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=29.0
Q ss_pred CcceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcC
Q psy5395 82 DGMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQ 125 (237)
Q Consensus 82 ~~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~ 125 (237)
..++.+.|.+|+|..+... .....|.| +|+..+.|.|++++.-.
T Consensus 130 ~~~l~~~V~~psG~~~~~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~ 176 (288)
T 2j3s_A 130 IQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYK 176 (288)
T ss_dssp CCCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEET
T ss_pred cCceEEEEECCCCCeeeeEEEeCCCCEEEEEEecccceeeEEEEEEC
Confidence 3568899999999866543 12344544 68889999999998644
No 60
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=51.93 E-value=44 Score=26.21 Aligned_cols=44 Identities=20% Similarity=0.306 Sum_probs=31.4
Q ss_pred cceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 83 GMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 83 ~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
..+.+.|.+|+|..+.-. .+..+|.| +|+....|.|.+-+.-..
T Consensus 44 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g 90 (212)
T 1qfh_A 44 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 90 (212)
T ss_dssp CCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETT
T ss_pred CeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECC
Confidence 457888999988654433 24556665 577899999999987543
No 61
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=49.39 E-value=67 Score=22.70 Aligned_cols=18 Identities=11% Similarity=0.324 Sum_probs=7.9
Q ss_pred chHhHHHHHHHHHHHHHH
Q psy5395 159 SVQNFTDSVRTVERNINE 176 (237)
Q Consensus 159 ~i~~l~~~i~~l~~~l~~ 176 (237)
.+..++..+..|.+...+
T Consensus 22 eI~~Ie~~I~eL~~iF~d 39 (109)
T 3hd7_B 22 EIIKLENSIRELHDMFMD 39 (109)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444333
No 62
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=49.30 E-value=28 Score=29.10 Aligned_cols=44 Identities=20% Similarity=0.306 Sum_probs=32.0
Q ss_pred cceEEEEeCCCCCEEecc-eeeccceE--EEeCCCeeeEEEEEEcCC
Q psy5395 83 GMAGFAVRNPNGQIVHPY-EWKKNAEY--QDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 83 ~~I~v~I~dP~g~~v~~~-~~~~~g~f--~f~~~~~G~Y~~Cf~N~~ 126 (237)
..+.+.|.+|+|..+... .+..+|.| +|+..+.|.|.+.+.-..
T Consensus 143 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g 189 (311)
T 1wlh_A 143 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 189 (311)
T ss_dssp CCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETT
T ss_pred CcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECC
Confidence 468899999998643332 34556765 678999999999997543
No 63
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=47.50 E-value=37 Score=28.13 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=32.3
Q ss_pred eCCCcceEEEEeCCCCCEEecceeeccceE--EEeCCCeeeEEEEEEcC
Q psy5395 79 RGGDGMAGFAVRNPNGQIVHPYEWKKNAEY--QDTPPHGGYYSVCIDNQ 125 (237)
Q Consensus 79 ~~~~~~I~v~I~dP~g~~v~~~~~~~~g~f--~f~~~~~G~Y~~Cf~N~ 125 (237)
+.+...+.+.|.+|.+..+.- .+..+|.| +|+.++.|.|.+++.=.
T Consensus 224 dag~g~l~v~v~gp~~~~~~~-~d~~dGt~~v~y~p~~~G~y~i~V~~~ 271 (288)
T 2j3s_A 224 EAGAGGLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKFN 271 (288)
T ss_dssp BSSSEEEEEEEEESSCEEEEE-EECTTSEEEEEEEESSCEEEEEEEEET
T ss_pred CCCCCceEEEEeCCCCcceeE-EECCCCEEEEEEEcCCCeeEEEEEEEC
Confidence 344566888999997654332 34566765 68889999999998743
No 64
>3b5n_D Protein transport protein SEC9; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae}
Probab=46.71 E-value=55 Score=20.93 Aligned_cols=49 Identities=4% Similarity=-0.000 Sum_probs=40.6
Q ss_pred hhccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHHhHHH
Q psy5395 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVM 203 (237)
Q Consensus 155 ~l~~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~~~~~est~~rv~ 203 (237)
+.++.++.+...+.+|...-..+-.|...+..+-.+--..++.+..|+.
T Consensus 7 e~D~nLd~l~~~~~rlk~ma~~mg~Eid~QN~~ldrI~~k~d~~d~ri~ 55 (64)
T 3b5n_D 7 EIDRNLDQIQQVSNRLKKMALTTGKELDSQQKRLNNIEESTDDLDINLH 55 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556889999999999999999999998888888888888887777763
No 65
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=45.99 E-value=29 Score=22.31 Aligned_cols=28 Identities=18% Similarity=0.393 Sum_probs=21.6
Q ss_pred EEEEEeCCCcceEEEEeCCCCCEEecce
Q psy5395 74 NFQVLRGGDGMAGFAVRNPNGQIVHPYE 101 (237)
Q Consensus 74 ~y~v~~~~~~~I~v~I~dP~g~~v~~~~ 101 (237)
.|++....+....+.+++++|++|.+.+
T Consensus 2 ~Fei~~~~~G~frfrLka~NGevI~sSe 29 (64)
T 3bid_A 2 YFEIYKDAKGEYRWRLKAANHEIIAQGE 29 (64)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEECC
T ss_pred EEEEEECCCCCEEEEEEeCCCCEEEECC
Confidence 4677666666788999999999998654
No 66
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=45.74 E-value=47 Score=22.58 Aligned_cols=48 Identities=8% Similarity=0.093 Sum_probs=40.1
Q ss_pred hhccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHHhHH
Q psy5395 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYV 202 (237)
Q Consensus 155 ~l~~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~~~~~est~~rv 202 (237)
+.++.++.|...+.+|...-..|-.|...+...-.+.-..+++++.++
T Consensus 27 eqD~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl 74 (87)
T 1l4a_D 27 DMENNMKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRI 74 (87)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345688999999999999999999998888888888888888877775
No 67
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=44.44 E-value=1e+02 Score=24.76 Aligned_cols=56 Identities=7% Similarity=0.158 Sum_probs=40.9
Q ss_pred hhccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHHhHHHHHHHHHH
Q psy5395 155 DLNVSVQNFTDSVRTVERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQI 210 (237)
Q Consensus 155 ~l~~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~~~~~~est~~rv~~~sii~i 210 (237)
.+...+..++.++..+.+.+..+..+..-+|.|..+.+.........=+.-.++.+
T Consensus 63 ~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpV 118 (213)
T 4ani_A 63 AAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPV 118 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 34456788888888888888888888888888888888877766555444444443
No 68
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=40.62 E-value=51 Score=19.31 Aligned_cols=29 Identities=10% Similarity=0.252 Sum_probs=20.4
Q ss_pred ccchHhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5395 157 NVSVQNFTDSVRTVERNINEILQQQYHAR 185 (237)
Q Consensus 157 ~~~i~~l~~~i~~l~~~l~~i~~eq~~~r 185 (237)
....++++.....|++++..+..|-..+|
T Consensus 9 E~r~k~le~~naeLEervstLq~EN~mLR 37 (42)
T 2oqq_A 9 ENRVKDLENKNSELEERLSTLQNENQMLR 37 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 34566777777778888888777766555
No 69
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=40.58 E-value=75 Score=33.36 Aligned_cols=59 Identities=12% Similarity=0.147 Sum_probs=38.4
Q ss_pred CCCEEEEEEEEEeCC----CcceEEEEeCCCCCEEecceeec--cceEEEe-CCCeeeEEEEEEcC
Q psy5395 67 PGATFYVNFQVLRGG----DGMAGFAVRNPNGQIVHPYEWKK--NAEYQDT-PPHGGYYSVCIDNQ 125 (237)
Q Consensus 67 ~~~~i~~~y~v~~~~----~~~I~v~I~dP~g~~v~~~~~~~--~g~f~f~-~~~~G~Y~~Cf~N~ 125 (237)
+|+++++.--+.+.+ ...+.+.|.||+|+.+.++.-.. ++.|... .+..|.|++.....
T Consensus 139 PGqtV~~rvi~~~~~~~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 139 PGSPVLYRVFSMDHNTSKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp TTCEEEEEEEECCC-----CCCEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEEEEEEcCCCcccCceEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeC
Confidence 567777655544322 24588999999999999875332 2333333 24689999999754
No 70
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=37.85 E-value=86 Score=32.81 Aligned_cols=59 Identities=12% Similarity=0.078 Sum_probs=40.5
Q ss_pred CCCEEEEEEEEEeCC----CcceEEEEeCCCCCEEecceee---ccceE--EEeC---CCeeeEEEEEEcC
Q psy5395 67 PGATFYVNFQVLRGG----DGMAGFAVRNPNGQIVHPYEWK---KNAEY--QDTP---PHGGYYSVCIDNQ 125 (237)
Q Consensus 67 ~~~~i~~~y~v~~~~----~~~I~v~I~dP~g~~v~~~~~~---~~g~f--~f~~---~~~G~Y~~Cf~N~ 125 (237)
+|++|++..-+.+.+ ...+.+.|.||+|+.+.+.... ..|-+ +|.. ...|.|++=+...
T Consensus 140 PGqtV~~r~i~~d~~~~p~~~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 140 PGSTVLYRVFTVDHKLLPVGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp TTSEEEEEEEEECTTSCCCCCCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEEEEEECCCCcccCceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 577887776665432 2458999999999999875433 34543 4444 3579999999754
No 71
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=37.69 E-value=63 Score=19.04 Aligned_cols=28 Identities=11% Similarity=-0.021 Sum_probs=18.3
Q ss_pred hHHHHHhHHhHHHHHHHHHHHHHHHHhH
Q psy5395 191 DFNLLEDNNRYVMNWSVIQILVIAATTT 218 (237)
Q Consensus 191 ~~~~~est~~rv~~~sii~ivvli~~s~ 218 (237)
|.++.+.--.-+.|.+++-+++++.+++
T Consensus 13 hE~Ty~gFi~~~k~gt~~~~~~ll~mai 40 (43)
T 1qle_D 13 QQATFAGFIKGATWVSILSIAVLVFLAL 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555556677777777777777664
No 72
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=36.75 E-value=1.2e+02 Score=21.90 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=49.2
Q ss_pred CCCcceEEEEcCCCCEEEEEEEEEeCCCcceEEEEeCCCCCEEecceeeccce---EEEeCCCeeeEEEEEEcCC
Q psy5395 55 PGKEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAE---YQDTPPHGGYYSVCIDNQF 126 (237)
Q Consensus 55 ~g~~~Cf~e~v~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~~~~~g~---f~f~~~~~G~Y~~Cf~N~~ 126 (237)
......|..++++...+.+.+.-. ...++...+++.+++.+.... .+|. -+|.+.++|.|-+.+..-.
T Consensus 35 ~dd~D~y~F~V~~~g~v~I~l~~~--~~~~~~w~ly~~~~nyv~y~~--~~gn~~~~~~~~~~pGkYYl~Vy~y~ 105 (121)
T 3jqw_A 35 TSDQDYFYFDVITPGEVKIDINKL--GYGGATWVVYDENNNAVSYAT--DDGQNLSGKFKADKPGRYYIHLYMFN 105 (121)
T ss_dssp TTCCEEEEEEESSCEEEEEEEEEC--SSSEEEEEEECTTSCEEEECE--ECSSEEEEEEEECSCEEEEEEEEEEE
T ss_pred cCCeeEEEEEeCCCCeEEEEEEec--CCCcEEEEEEeCCCCeEEEec--cCCCEEEEEEEeCCCeeEEEEEEEec
Confidence 456899999999888888887654 345688888888777665543 2222 2466779999999998743
No 73
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=36.14 E-value=61 Score=23.48 Aligned_cols=53 Identities=11% Similarity=0.196 Sum_probs=37.0
Q ss_pred EEEEEEeCCCcceEEEEeCCCCCEEeccee------------------eccceEEEeCCCeeeEEEEEEcC
Q psy5395 73 VNFQVLRGGDGMAGFAVRNPNGQIVHPYEW------------------KKNAEYQDTPPHGGYYSVCIDNQ 125 (237)
Q Consensus 73 ~~y~v~~~~~~~I~v~I~dP~g~~v~~~~~------------------~~~g~f~f~~~~~G~Y~~Cf~N~ 125 (237)
+.|++..+.+....+.++.++|++|...+. .....|.......|.|.|=+.-.
T Consensus 3 g~FEi~~~~~g~~rFrLka~NgeiI~sSe~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka~ 73 (118)
T 2k49_A 3 GWYELSKSSNDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAA 73 (118)
T ss_dssp CEEEEEECTTSCEEEEEECSSSCEEEECCCBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEECT
T ss_pred ceEEEEEcCCCCEEEEEEECCCCEEEECCCcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEcC
Confidence 468887766667899999999999986531 12345776666777776655444
No 74
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=35.59 E-value=2.2e+02 Score=24.89 Aligned_cols=59 Identities=12% Similarity=0.067 Sum_probs=39.4
Q ss_pred CCEEEEEEEEEeCCCcceEEEEeCCCCCEEecce-eeccce-EEEeC----CCeeeEEEEEEcCC
Q psy5395 68 GATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYE-WKKNAE-YQDTP----PHGGYYSVCIDNQF 126 (237)
Q Consensus 68 ~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~-~~~~g~-f~f~~----~~~G~Y~~Cf~N~~ 126 (237)
+..+.+.|.+...++..|..+|+|.+|+.+.... ....+. .+++. .+.|.|.+=+.-..
T Consensus 310 ~g~~~l~f~~~~~~~~~v~~~v~d~~~~~~~~~~~~v~~~~~~~~tl~ls~~~aGhh~lvv~~~~ 374 (391)
T 2xwx_A 310 EQPIQLDLTLEAQGEMSAELTVYNHHQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKD 374 (391)
T ss_dssp SSCCEEEEEEEEESSEEEEEEEECTTSCEEEEEEEEECTTCEEEEEEECSCCCSEEEEEEEEEEE
T ss_pred CCcEEEEEEEEecCceEEEEEEEcCCCCccceeeEEEcCCCcceEEEEccCCCCccEEEEEEEEC
Confidence 3455566666666678899999999999887764 222222 33433 47888988887654
No 75
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=34.64 E-value=33 Score=24.92 Aligned_cols=53 Identities=11% Similarity=0.191 Sum_probs=36.1
Q ss_pred ceEEEEeCCCCCEEecceeeccceEEEeCCCeeeEEEEEEcCCCCC-CCeEEEEEE
Q psy5395 84 MAGFAVRNPNGQIVHPYEWKKNAEYQDTPPHGGYYSVCIDNQFSRN-AGKLVNMYL 138 (237)
Q Consensus 84 ~I~v~I~dP~g~~v~~~~~~~~g~f~f~~~~~G~Y~~Cf~N~~s~~-~~k~V~f~i 138 (237)
+..|.+++.+|+.+..+. ..|.+.+.--..|.|.+-=.-....+ ....+.|.+
T Consensus 44 GA~F~l~~~~g~~v~~~~--sdG~~~~~~L~~G~Y~l~EtkAP~GY~l~~~i~ftV 97 (121)
T 2x5p_A 44 GATMELRDSSGKTISTWI--SDGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTV 97 (121)
T ss_dssp CCEEEEECTTSCEEEEEE--CCSSCEEEEECSEEEEEEEEECCTTCCCCCCEEEEE
T ss_pred CCEEEEEECCCCEEEEEE--eCCEEEEcccCCcEEEEEEEeCCCCcccCCCEEEEE
Confidence 467899999999887653 56888888778899988765443222 224455554
No 76
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=34.14 E-value=81 Score=19.28 Aligned_cols=29 Identities=10% Similarity=-0.010 Sum_probs=18.1
Q ss_pred hHHHHHhHHhHHHHHHHHHHHHHHHHhHH
Q psy5395 191 DFNLLEDNNRYVMNWSVIQILVIAATTTV 219 (237)
Q Consensus 191 ~~~~~est~~rv~~~sii~ivvli~~s~~ 219 (237)
|.++.+.--.-+.|.+++-++++++++++
T Consensus 21 he~Ty~gFi~~~k~gt~~~~~~ll~laif 49 (51)
T 1m56_D 21 QEKTFAGFVRMVTWAAVVIVAALIFLALA 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445556677777777777777653
No 77
>3p6b_A Cellulose 1,4-beta-cellobiosidase; beta-sandwich, carbohydrate binding, sugar binding protein; 2.00A {Clostridium thermocellum}
Probab=30.69 E-value=2e+02 Score=22.64 Aligned_cols=48 Identities=8% Similarity=0.129 Sum_probs=29.9
Q ss_pred eeEEEEEcCCCc-----ceEEEEc--CCCCEEEEEEEEEeCCCcceEEEEeCCCC
Q psy5395 47 MDYKIHIDPGKE-----DCFFQYV--NPGATFYVNFQVLRGGDGMAGFAVRNPNG 94 (237)
Q Consensus 47 ~~l~f~l~~g~~-----~Cf~e~v--~~~~~i~~~y~v~~~~~~~I~v~I~dP~g 94 (237)
..+.+.|..... +-+...+ .+|.+-.++|.+.......|.+.|-++.+
T Consensus 75 g~l~v~I~~~G~~~W~vQl~q~gi~L~~G~tY~lSFdAkA~~~r~i~v~i~~~~~ 129 (205)
T 3p6b_A 75 KAFRLTVIDKGQNKWSVQMRHRGITLEQGHTYTVRFTIWSDKSCRVYAKIGQMGE 129 (205)
T ss_dssp EEEEEEEEEECSSGGGEEEEEEEEEECTTCEEEEEEEEEESSCEEEEEEEEESST
T ss_pred CEEEEEECCCCCCceeEEEEECCEEecCCCEEEEEEEEEeCCCceEEEEEecCCC
Confidence 456666643332 3444334 47888888888877666667777765543
No 78
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=29.99 E-value=1.7e+02 Score=21.80 Aligned_cols=55 Identities=16% Similarity=0.277 Sum_probs=40.5
Q ss_pred cchHhHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhhHHHHHhHHhHHHHHHHHHHHH
Q psy5395 158 VSVQNFTDSVRTV--------ERNINEILQQQYHARSREARDFNLLEDNNRYVMNWSVIQILV 212 (237)
Q Consensus 158 ~~i~~l~~~i~~l--------~~~l~~i~~eq~~~r~re~~~~~~~est~~rv~~~sii~ivv 212 (237)
..++.+++.|... +.-|..|-.||.|+...|+-..++-+....-.-.|+.++-++
T Consensus 68 ~eL~~m~~~i~~ekP~WKKiWE~EL~~VceEQqfl~~QedL~~DL~eDL~ka~etf~lVeq~~ 130 (141)
T 3okq_A 68 ADVLKLQEFIDTEKPHWKKTWEAELDKVCEEQQFLTLQEELILDLKEDLGKALETFDLIKLCC 130 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555543 344566889999999999999999999988887887776553
No 79
>2xr4_A Lectin; sugar binding protein, LUNG, pathogen; 1.90A {Burkholderia cenocepacia}
Probab=29.22 E-value=1.6e+02 Score=21.15 Aligned_cols=76 Identities=11% Similarity=0.026 Sum_probs=41.1
Q ss_pred ceEEEEcCCCCEEEEEEEEEeCCCcceEEEEeCCCCCEEe--cceeeccceEEEeCCCeeeEEEEEEcCCCCCCCeEEEE
Q psy5395 59 DCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVH--PYEWKKNAEYQDTPPHGGYYSVCIDNQFSRNAGKLVNM 136 (237)
Q Consensus 59 ~Cf~e~v~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~--~~~~~~~g~f~f~~~~~G~Y~~Cf~N~~s~~~~k~V~f 136 (237)
-||. +|++..+.+...+.......|.+.|-| +-++.. .....+++..-.++-..|.=++|+.-.......+....
T Consensus 5 g~F~--LP~ni~Fg~ta~~Nsa~~QtikvyIdd-~~~~~aT~~g~gt~d~~~~t~~lnSg~GkVriev~~nGkps~l~s~ 81 (116)
T 2xr4_A 5 GTFN--LPPHIKFGVTALTHAANDQTIDIYIDD-DPKPAATFKGAGAQDQNLGTKVLDSGNGRVRVIVMANGRPSRLGSR 81 (116)
T ss_dssp SEEE--CCTTCEEEEEEEECSCSCCEEEEEETT-CSSCSEEECCCSSTTEEEEEEEEECTTSEEEEEEEETTEECEEEEE
T ss_pred ceee--CCCCcEEeEEEEeccCCceeEEEEeCC-CCccceeeeccCcCCCccceEEEecCCCeEEEEEEeCCccccceee
Confidence 4776 899999999988877766778888755 222332 22222222222222223334566654443322355554
Q ss_pred E
Q psy5395 137 Y 137 (237)
Q Consensus 137 ~ 137 (237)
.
T Consensus 82 ~ 82 (116)
T 2xr4_A 82 Q 82 (116)
T ss_dssp E
T ss_pred e
Confidence 4
No 80
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.66 E-value=83 Score=26.32 Aligned_cols=67 Identities=12% Similarity=0.108 Sum_probs=33.0
Q ss_pred e--EEEEcCC-CCEEEEEEEEEeC--C-----CcceEEEEeCCCCCEEecceee----ccceEEEeC-CCeeeEEEEE-E
Q psy5395 60 C--FFQYVNP-GATFYVNFQVLRG--G-----DGMAGFAVRNPNGQIVHPYEWK----KNAEYQDTP-PHGGYYSVCI-D 123 (237)
Q Consensus 60 C--f~e~v~~-~~~i~~~y~v~~~--~-----~~~I~v~I~dP~g~~v~~~~~~----~~g~f~f~~-~~~G~Y~~Cf-~ 123 (237)
| ++|+.+. ...+.+.|.-... + -..|.+.|.|.+|+.+.+.... ..+.|.... -..|.|++-. -
T Consensus 4 Cd~I~edl~dC~~~l~F~Ydyn~~~~d~f~~~V~~V~lyvFD~~G~~v~~~~~~~~~L~~~~y~m~l~Lp~G~Y~~VaWg 83 (296)
T 3gf8_A 4 CDSFNEDLPECRLSVKFKYDYNMEFADAFHAQVDKVELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAWA 83 (296)
T ss_dssp ---------CCCEEEEEECCCSTTCSCCHHHHCCEEEEEEECTTSBEEEEEEEESGGGGSSCCCEEECCCSEEEEEEEEE
T ss_pred CccCCcCccCCCCEEEEEEecCCCcccccccccCEEEEEEEcCCCCEEEEEecchhhcccCceEEEEecCCCcEEEEEEE
Confidence 7 7777642 1255555433211 1 1469999999999999986432 133333332 2358888644 4
Q ss_pred cCC
Q psy5395 124 NQF 126 (237)
Q Consensus 124 N~~ 126 (237)
|..
T Consensus 84 g~~ 86 (296)
T 3gf8_A 84 GAR 86 (296)
T ss_dssp SCC
T ss_pred CCC
Confidence 443
No 81
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=27.85 E-value=1.3e+02 Score=19.83 Aligned_cols=16 Identities=13% Similarity=0.403 Sum_probs=9.3
Q ss_pred hHHHHHHHHHHHHHHH
Q psy5395 162 NFTDSVRTVERNINEI 177 (237)
Q Consensus 162 ~l~~~i~~l~~~l~~i 177 (237)
++++.+.+|...+..+
T Consensus 4 dlEEKv~~LE~sld~L 19 (74)
T 3swf_A 4 GLEEKVTRMESSVDLL 19 (74)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4556666666665554
No 82
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=26.79 E-value=56 Score=22.16 Aligned_cols=19 Identities=11% Similarity=0.216 Sum_probs=11.6
Q ss_pred eccceEEEeC---------CCeeeEEEE
Q psy5395 103 KKNAEYQDTP---------PHGGYYSVC 121 (237)
Q Consensus 103 ~~~g~f~f~~---------~~~G~Y~~C 121 (237)
...|.++|++ +.+|.|-+-
T Consensus 39 D~~G~~s~~~G~Gd~~v~A~k~G~~g~a 66 (82)
T 3e8v_A 39 DRSGHASLTAGKGDMLVWASKDGRFGYS 66 (82)
T ss_dssp CTTSEEEEECCSEEEEEEEEETTEEEEE
T ss_pred CCCceEEEEEcCCceEEEeccCCEEEEE
Confidence 4567777766 556655444
No 83
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=26.14 E-value=1.1e+02 Score=20.18 Aligned_cols=29 Identities=7% Similarity=0.201 Sum_probs=23.9
Q ss_pred cchHhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5395 158 VSVQNFTDSVRTVERNINEILQQQYHARS 186 (237)
Q Consensus 158 ~~i~~l~~~i~~l~~~l~~i~~eq~~~r~ 186 (237)
+.++-|.++|..|.+++..+..|-.++|.
T Consensus 15 EEVevLKe~I~EL~e~~~qLE~EN~~Lk~ 43 (78)
T 1dip_A 15 EEVEILKEQIRELVEKNSQLERENTLLKT 43 (78)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788889999999999998888877764
No 84
>2k7i_A UPF0339 protein ATU0232; protein of unknown function, swapped dimer. PSI2, structural genomics, unknown function; NMR {Agrobacterium tumefaciens str} SCOP: d.348.1.1
Probab=25.07 E-value=53 Score=22.31 Aligned_cols=31 Identities=23% Similarity=0.478 Sum_probs=22.2
Q ss_pred EEEEEEEEEeCCCcceEEEEeCCCCCEEecce
Q psy5395 70 TFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYE 101 (237)
Q Consensus 70 ~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~ 101 (237)
.+.+ |++....+....|.++.+||++|...+
T Consensus 21 ~Mag-FEi~k~~~Gq~rFrLkA~NGevIasSe 51 (83)
T 2k7i_A 21 GMYK-FEIYQDKAGEYRFRFKASNGETMFSSE 51 (83)
T ss_dssp -CCE-EEEEECTTSCEEEEECCTTSCCCEEBC
T ss_pred cccc-EEEEEcCCCCEEEEEEECCCCEEEECC
Confidence 3344 888776666678888899998887543
No 85
>2chh_A Protein RSC3288; lectin, sugar-binding protein, D-mannose, plant pathogen, hypothetical protein; HET: MAN BMA; 1.0A {Ralstonia solanacearum} SCOP: b.115.1.1 PDB: 1uqx_A*
Probab=24.87 E-value=1.9e+02 Score=20.65 Aligned_cols=75 Identities=12% Similarity=0.078 Sum_probs=43.4
Q ss_pred cceEEEEcCCCCEEEEEEEEEeCCCcceEEEEeCCCCCEEecceeecc--ceEEEeCCCeeeEEEEEEcCCCCCCCeEEE
Q psy5395 58 EDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKN--AEYQDTPPHGGYYSVCIDNQFSRNAGKLVN 135 (237)
Q Consensus 58 ~~Cf~e~v~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~~~~~--g~f~f~~~~~G~Y~~Cf~N~~s~~~~k~V~ 135 (237)
.-||. +|++..+.+...+.......|.+.|-| ++...-.++.. ...-.++-..|.=++|+.-.......+...
T Consensus 4 ~g~F~--LP~ni~Fg~ta~~Nsa~~QtikvyIdd---~~~aT~tg~gt~d~~~gt~~l~Sg~GkVriev~~nGKps~l~s 78 (114)
T 2chh_A 4 QGVFT--LPANTSFGVTAFANAANTQTIQVLVDN---VVKATFTGSGTSDKLLGSQVLNSGSGAIKIQVSVNGKPSDLVS 78 (114)
T ss_dssp CSEEE--CCTTCEEEEEEEEEEEEEEEEEEEETT---EEEEEEEEEEEEEEEEEEEEEECTTSEEEEEEEETTEECEEEE
T ss_pred cceee--CCCCcEEeEEEEeccCCceeEEEEECC---eecceeeccCcCCCccceEEEecCCCeEEEEEEeCCcccccee
Confidence 34776 899999999988877666678888755 65554433322 212223333344466666554332235555
Q ss_pred EE
Q psy5395 136 MY 137 (237)
Q Consensus 136 f~ 137 (237)
..
T Consensus 79 ~~ 80 (114)
T 2chh_A 79 NQ 80 (114)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 86
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=24.69 E-value=1.7e+02 Score=20.09 Aligned_cols=11 Identities=18% Similarity=0.153 Sum_probs=6.8
Q ss_pred HHHHhHHhHHH
Q psy5395 193 NLLEDNNRYVM 203 (237)
Q Consensus 193 ~~~est~~rv~ 203 (237)
.-+.+.|+|+.
T Consensus 86 ~evasLnRriq 96 (101)
T 3u59_A 86 AEVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 35667777764
No 87
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=24.40 E-value=1.7e+02 Score=19.83 Aligned_cols=34 Identities=6% Similarity=-0.090 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhHHhHHHHH
Q psy5395 172 RNINEILQQQYHARSREARDFNLLEDNNRYVMNW 205 (237)
Q Consensus 172 ~~l~~i~~eq~~~r~re~~~~~~~est~~rv~~~ 205 (237)
+++..+.+...-+......++......+++++|=
T Consensus 33 ekL~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwk 66 (91)
T 3hd7_A 33 QKLSELDDRADALQAGASQFETSAAKLKRKYWWK 66 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555556666666666666664443
No 88
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=24.22 E-value=1.6e+02 Score=20.09 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=25.7
Q ss_pred EcCCCCEEEEEEEEEeCCCcceEEEEeCCCCCEEecceeeccceEEEeCCCeeeEEE
Q psy5395 64 YVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKNAEYQDTPPHGGYYSV 120 (237)
Q Consensus 64 ~v~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~~~~~g~f~f~~~~~G~Y~~ 120 (237)
.+++|+.+.+.+.-.++... .+.+ |+...-..-.......++|++...|.|.+
T Consensus 41 ~v~~G~~V~~~~~n~d~~~H--~~~i--~~~~~~~~i~pG~~~~~~f~~~~~G~y~~ 93 (112)
T 1iby_A 41 VVKKGDAVKVVVENKSPISE--GFSI--DAFGVQEVIKAGETKTISFTADKAGAFTI 93 (112)
T ss_dssp EEETTCEEEEEEEECSSSCE--EEEE--GGGTEEEEECTTCEEEEEEECCSCEEEEE
T ss_pred EEeCCCEEEEEEEECCCCeE--EEEE--cCCCceeEeCCCCEEEEEEECCCCEEEEE
Confidence 46677777776554332111 1222 22111000011233457788888998864
No 89
>2bv4_A Lectin CV-IIL; mannose; HET: MMA; 1.0A {Chromobacterium violaceum} PDB: 2boi_A*
Probab=23.66 E-value=2e+02 Score=20.49 Aligned_cols=74 Identities=14% Similarity=0.067 Sum_probs=42.9
Q ss_pred ceEEEEcCCCCEEEEEEEEEeCCCcceEEEEeCCCCCEEecceeecc--ceEEEeCCCeeeEEEEEEcCCCCCCCeEEEE
Q psy5395 59 DCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRNPNGQIVHPYEWKKN--AEYQDTPPHGGYYSVCIDNQFSRNAGKLVNM 136 (237)
Q Consensus 59 ~Cf~e~v~~~~~i~~~y~v~~~~~~~I~v~I~dP~g~~v~~~~~~~~--g~f~f~~~~~G~Y~~Cf~N~~s~~~~k~V~f 136 (237)
-||. +|++..+.+...+.......|.+.|-| ++...-.++.. ...-.++-..|.=++|+.-.......+....
T Consensus 4 g~F~--LP~ni~Fg~ta~~Nsa~~QtikvyIdd---~~~aT~tg~gt~d~~~~t~~l~Sg~GkVriev~~nGKps~l~s~ 78 (113)
T 2bv4_A 4 GVFT--LPARINFGVTVLVNSAATQHVEIFVDN---EPRAAFSGVGTGDNNLGTKVINSGSGNVRVQITANGRQSDLVSS 78 (113)
T ss_dssp SEEE--CCTTCEEEEEEEEEEEEEEEEEEEETT---EEEEEEEEEEEEEEEEEEEEEECTTSEEEEEEEETTEECEEEEE
T ss_pred ceEc--CCCCcEEeEEEEeccCCceeEEEEECC---eecceeeccCcCCCccceEEEecCCCeEEEEEEeCCccccceee
Confidence 4776 899999999988877666678888755 65554433322 2122233333444666665543322355555
Q ss_pred E
Q psy5395 137 Y 137 (237)
Q Consensus 137 ~ 137 (237)
.
T Consensus 79 ~ 79 (113)
T 2bv4_A 79 Q 79 (113)
T ss_dssp E
T ss_pred e
Confidence 4
No 90
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=23.52 E-value=1.8e+02 Score=25.43 Aligned_cols=33 Identities=3% Similarity=0.081 Sum_probs=17.7
Q ss_pred cchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5395 158 VSVQNFTDSVRTVERNINEILQQQYHARSREAR 190 (237)
Q Consensus 158 ~~i~~l~~~i~~l~~~l~~i~~eq~~~r~re~~ 190 (237)
++++.++++...++..+..+..+......+...
T Consensus 10 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 42 (403)
T 4etp_A 10 EKIAALKEKIAALKEKIKDTELGMKELNEILIK 42 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555666666666666555555444443333
No 91
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=22.63 E-value=1.1e+02 Score=17.16 Aligned_cols=24 Identities=8% Similarity=0.199 Sum_probs=12.4
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHH
Q psy5395 160 VQNFTDSVRTVERNINEILQQQYH 183 (237)
Q Consensus 160 i~~l~~~i~~l~~~l~~i~~eq~~ 183 (237)
++++++.+..|...-.++.++...
T Consensus 3 MnQLE~KVEeLl~~~~~Le~eV~R 26 (36)
T 1kd8_B 3 VKQLKAKVEELKSKLWHLKNKVAR 26 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHH
Confidence 445555555555555555444433
No 92
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=22.50 E-value=1.1e+02 Score=17.95 Aligned_cols=23 Identities=13% Similarity=0.378 Sum_probs=14.3
Q ss_pred cchHhHHHHHHHHHHHHHHHHHH
Q psy5395 158 VSVQNFTDSVRTVERNINEILQQ 180 (237)
Q Consensus 158 ~~i~~l~~~i~~l~~~l~~i~~e 180 (237)
..-+.++.+|..|+.++..+...
T Consensus 16 ~r~e~LE~Ri~~LE~KLd~L~~~ 38 (43)
T 2pnv_A 16 ERSEDFEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHH
Confidence 34456666777777777666543
No 93
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=22.16 E-value=2e+02 Score=19.86 Aligned_cols=10 Identities=20% Similarity=0.179 Sum_probs=6.0
Q ss_pred HHHhHHhHHH
Q psy5395 194 LLEDNNRYVM 203 (237)
Q Consensus 194 ~~est~~rv~ 203 (237)
.+.+.++|+.
T Consensus 87 ev~~L~Rriq 96 (101)
T 3u1c_A 87 EVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5556666654
No 94
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=21.98 E-value=67 Score=22.73 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=21.9
Q ss_pred EEEEeCCCCCEEecceeeccceEEEeCCCeee
Q psy5395 86 GFAVRNPNGQIVHPYEWKKNAEYQDTPPHGGY 117 (237)
Q Consensus 86 ~v~I~dP~g~~v~~~~~~~~g~f~f~~~~~G~ 117 (237)
.+.|+|.+|.++........++..+-+..+|.
T Consensus 51 ~lrI~D~~G~vi~~~~~~a~~~~~vLa~~g~n 82 (106)
T 3fn2_A 51 YVRITDKDGQVITYEDGSVQDKTVFLTNEGAN 82 (106)
T ss_dssp EEEEECTTSCBCSCCCSCSTTEEEEEEECSCC
T ss_pred cEEEEcCCCCEEecCCCCcCcceeehhhcCCC
Confidence 47889999999985544455666666665553
No 95
>2wra_A Lectin, BCLA; sugar binding protein, bacterial lectin, oligosaccharides; HET: MAN; 1.10A {Burkholderia cenocepacia} PDB: 2wr9_A* 2vnv_A*
Probab=20.73 E-value=2.5e+02 Score=20.41 Aligned_cols=33 Identities=12% Similarity=0.190 Sum_probs=26.1
Q ss_pred CcceEEEEcCCCCEEEEEEEEEeCCCcceEEEEeC
Q psy5395 57 KEDCFFQYVNPGATFYVNFQVLRGGDGMAGFAVRN 91 (237)
Q Consensus 57 ~~~Cf~e~v~~~~~i~~~y~v~~~~~~~I~v~I~d 91 (237)
..-||. +|+++.+.+.+.+.......|.+.|-|
T Consensus 9 r~g~F~--LP~ni~Fg~ta~~Nsa~~QtikvyIdd 41 (128)
T 2wra_A 9 RAGEFS--IPPNTDFRAIFFANAAEQQHIKLFIGD 41 (128)
T ss_dssp TTSEEE--CCTTCEEEEEEEECCSSCEEEEEEETT
T ss_pred cccccc--CCCCceEeEEEEeccCCceeEEEEeCC
Confidence 456887 899999999988887766778888755
No 96
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=20.68 E-value=7.1e+02 Score=25.66 Aligned_cols=60 Identities=15% Similarity=0.277 Sum_probs=40.2
Q ss_pred CCCEEEEEEEEEeCC----Ccce-EEEEeCCCCCEEecceee--ccceE--EEeC---CCeeeEEEEEEcCC
Q psy5395 67 PGATFYVNFQVLRGG----DGMA-GFAVRNPNGQIVHPYEWK--KNAEY--QDTP---PHGGYYSVCIDNQF 126 (237)
Q Consensus 67 ~~~~i~~~y~v~~~~----~~~I-~v~I~dP~g~~v~~~~~~--~~g~f--~f~~---~~~G~Y~~Cf~N~~ 126 (237)
+|+++.+.-.+.+.+ ...+ .+.|.||+|+.|.++... ..|-+ +|.. +..|.|+|-.....
T Consensus 117 Pgq~V~~rv~~~~~~~~p~~~~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~~ 188 (1451)
T 4acq_A 117 PGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 188 (1451)
T ss_dssp TTCEEEEEEEEECTTCCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CCCEEEEEEEEECCCCcCccCceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEecC
Confidence 688888766665432 1233 579999999999987532 34543 3432 56899999998653
No 97
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=20.66 E-value=76 Score=24.38 Aligned_cols=35 Identities=9% Similarity=0.018 Sum_probs=23.0
Q ss_pred CCCCEEEEEEEEEeCC---CcceEEEEeCCCCCEEecc
Q psy5395 66 NPGATFYVNFQVLRGG---DGMAGFAVRNPNGQIVHPY 100 (237)
Q Consensus 66 ~~~~~i~~~y~v~~~~---~~~I~v~I~dP~g~~v~~~ 100 (237)
..|+.+.+.+.+.-.. ...+.+.|+|.+|..++-.
T Consensus 67 ~~Ge~v~l~i~~~~~~~i~~~v~G~~Ik~~~G~~I~g~ 104 (188)
T 2r5o_A 67 TGNQQTDFLMKVVFEYDFDCVVPGILIKTLDGLFLYGT 104 (188)
T ss_dssp ETTCEEEEEEEEEESSCEEEEEEEEEEEETTCCEEEEE
T ss_pred eCCCEEEEEEEEEECCcCCccEEEEEEECCCCCEEEec
Confidence 3566655555554322 2458889999999988864
Done!