BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5396
(291 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8N5Y8|PAR16_HUMAN Mono [ADP-ribose] polymerase PARP16 OS=Homo sapiens GN=PARP16 PE=1
SV=2
Length = 322
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 169/273 (61%), Gaps = 14/273 (5%)
Query: 14 KQILAWNKLGCDIKWSIFVSACQSYRVSSCLHPFPPMFIKNQHKDISAVLECINQMPLLS 73
++ + L D++ S+F SA QSY+ S L PFP + + KD A+L +++P L
Sbjct: 10 REAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLADASKLPNLK 69
Query: 74 SVLHSQRNSHPSPKLCDLIYLLHWLLVEQSPSLEEVPRDQYDSVLNLVSC-EPNVAKPDF 132
+L S ++H + DL+ W+L + ++ + +++ + L V PDF
Sbjct: 70 ELLQSSGDNHK--RAWDLV---SWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVPAPDF 124
Query: 133 IFQVQYSPQSSIESNWSKLSLGRKKILHAFHGSRLENFHSILNFGLQQHFNKNSLFGQGI 192
+F+++Y ++ + +K G + +++AFHGSRLENFHSI++ GL H NK SLFG+G
Sbjct: 125 LFEIEYFDPANAKFYETK---GERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGT 181
Query: 193 YLSSQLGICLIYSPYSAGWGGSCVGSELSIVSLCSIVDDPDQVKCQ---EDTEE-NRRRA 248
YL+S L + LIYSP+ GW S +G LS V++C ++D PD VKCQ +D++E +RRRA
Sbjct: 182 YLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPD-VKCQTKKKDSKEIDRRRA 240
Query: 249 LAQDSLGGEVPHKYYVVENSALVKVKYVLVYTR 281
+ S GG++P KY+VV N+ L++VKY+LVY++
Sbjct: 241 RIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYSQ 273
>sp|Q7TMM8|PAR16_MOUSE Mono [ADP-ribose] polymerase PARP16 OS=Mus musculus GN=Parp16 PE=2
SV=2
Length = 322
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 161/264 (60%), Gaps = 12/264 (4%)
Query: 22 LGCDIKWSIFVSACQSYRVSSCLHPFPPMFIKNQHKDISAVLECINQMPLLSSVLHSQRN 81
L D++ S+F SA QSY+ S L PFP + ++ KD A+L ++P L +L S R+
Sbjct: 18 LAADLRCSLFASALQSYKRDSVLRPFPASYARHDCKDFEALLADTGRLPNLKELLQSSRD 77
Query: 82 SHPSPKLCDLIYLLHWLLVEQSPSLEEVPRDQYDSVLNLVSC-EPNVAKPDFIFQVQYSP 140
+ + DL+ W+L + ++ + +++ + L V PDF+F+++Y
Sbjct: 78 T--DKQAWDLV---SWILSSKILTIHSAKKAEFEKIQQLTGAPHTPVPTPDFLFEIEYFD 132
Query: 141 QSSIESNWSKLSLGRKKILHAFHGSRLENFHSILNFGLQQHFNKNSLFGQGIYLSSQLGI 200
++ +K G + +++AFHGSRLENFHSI++ GL H NK SLFG+G YL+S L +
Sbjct: 133 PANSRFYETK---GERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSL 189
Query: 201 CLIYSPYSAGWGGSCVGSELSIVSLCSIVDDPD---QVKCQEDTEENRRRALAQDSLGGE 257
LIYSP+ GW S +G LS V++C ++D PD Q+K ++ E +R RA + S GGE
Sbjct: 190 ALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPDVKCQIKKKDSKEIDRSRARIKHSEGGE 249
Query: 258 VPHKYYVVENSALVKVKYVLVYTR 281
+P KY+VV N+ L++VKY+LVY++
Sbjct: 250 IPPKYFVVTNNQLLRVKYLLVYSQ 273
>sp|Q5U2Q4|PAR16_RAT Mono [ADP-ribose] polymerase PARP16 OS=Rattus norvegicus GN=Parp16
PE=2 SV=1
Length = 322
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 164/265 (61%), Gaps = 14/265 (5%)
Query: 22 LGCDIKWSIFVSACQSYRVSSCLHPFPPMFIKNQHKDISAVLECINQMPLLSSVLHSQRN 81
L D++ S+F SA QSY+ S L PFP + ++ KD A+L ++P L +L S R+
Sbjct: 18 LAADLRCSLFASALQSYKRDSVLRPFPASYARHDCKDFEALLADTGRLPNLKELLQSSRD 77
Query: 82 SHPSPKLCDLIYLLHWLLVEQSPSLEEVPRDQYDSVLNLVSC-EPNVAKPDFIFQVQYSP 140
+ + DL+ W+L + ++ + +++ + L V PDF+F+++Y
Sbjct: 78 T--DKQTWDLV---SWILSSKILTIHSAEKAEFEKIQQLTGAPHTPVPIPDFLFEIEYFD 132
Query: 141 QSSIESNWSKLSLGRKKILHAFHGSRLENFHSILNFGLQQHFNKNSLFGQGIYLSSQLGI 200
++ +K G + +++AFHGSRLENFHSI++ GL H NK SLFG+G YL+S L +
Sbjct: 133 PANARFYETK---GGRDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSL 189
Query: 201 CLIYSPYSAGWGGSCVGSELSIVSLCSIVDDPDQVKCQ---EDTEE-NRRRALAQDSLGG 256
LIYSP+ GW S +G LS V++C ++D PD VKCQ +D++E +R RA + S GG
Sbjct: 190 ALIYSPHGRGWQHSLLGQTLSCVAVCEVIDHPD-VKCQTKKKDSKEIDRSRARIKHSEGG 248
Query: 257 EVPHKYYVVENSALVKVKYVLVYTR 281
+VP KY+VV N+ L++VKY+LVY++
Sbjct: 249 DVPPKYFVVTNNQLLRVKYLLVYSQ 273
>sp|Q3UD82|PARP8_MOUSE Poly [ADP-ribose] polymerase 8 OS=Mus musculus GN=Parp8 PE=2 SV=1
Length = 852
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 161 AFHGSRLENFHSILNFGLQQHFNK-----NSLFGQGIYLSSQLGICLIYS 205
AFHGS +EN+HSIL GL N +++G GIYLS I YS
Sbjct: 693 AFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYS 742
>sp|Q8N3A8|PARP8_HUMAN Poly [ADP-ribose] polymerase 8 OS=Homo sapiens GN=PARP8 PE=2 SV=1
Length = 854
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 161 AFHGSRLENFHSILNFGLQQHFNK-----NSLFGQGIYLSSQLGICLIYS 205
AFHGS +EN+HSIL GL N +++G GIYLS I YS
Sbjct: 695 AFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYS 744
>sp|Q5RDU4|PARP6_PONAB Poly [ADP-ribose] polymerase 6 OS=Pongo abelii GN=PARP6 PE=2 SV=1
Length = 610
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 161 AFHGSRLENFHSILNFGL-QQHFNK----NSLFGQGIYLSSQLGICLIYSPYSAG 210
AFHGS +EN+HSIL GL + K + +G+GIYLS I YS G
Sbjct: 451 AFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISFGYSGMGKG 505
>sp|Q6P6P7|PARP6_MOUSE Poly [ADP-ribose] polymerase 6 OS=Mus musculus GN=Parp6 PE=2 SV=1
Length = 630
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 161 AFHGSRLENFHSILNFGL-QQHFNK----NSLFGQGIYLSSQLGICLIYSPYSAG 210
AFHGS +EN+HSIL GL + K + +G+GIYLS I YS G
Sbjct: 471 AFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISFGYSGMGKG 525
>sp|Q2NL67|PARP6_HUMAN Poly [ADP-ribose] polymerase 6 OS=Homo sapiens GN=PARP6 PE=2 SV=1
Length = 630
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 161 AFHGSRLENFHSILNFGL-QQHFNK----NSLFGQGIYLSSQLGICLIYSPYSAG 210
AFHGS +EN+HSIL GL + K + +G+GIYLS I YS G
Sbjct: 471 AFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISFGYSGMGKG 525
>sp|Q9CDR6|EZRA_LACLA Septation ring formation regulator EzrA OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ezrA PE=3 SV=1
Length = 576
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Query: 11 TELKQILAWNKLGCDIKWSIFVSACQSYRVS-SCLHPFPPMFIKNQHKDISAVLECINQM 69
TE Q + N G I+ + + + + ++ + P FIK KD+ LE + +
Sbjct: 182 TEFSQFVTLNSTGDPIEAAEVLETAEEHTIALRAITEQIPSFIKTIEKDVPKRLEELQEA 241
Query: 70 --PLLSSVLHSQRNSHPSPKLCDLIYLLHWLLVEQSPSLEEVPRDQYDSVLNLVSCEPNV 127
++ N + ++ DL H LVE S LE+ D+ ++ L L+ + V
Sbjct: 242 SDKFVAEEYILPDNVNIKERMDDL----HDHLVESSSLLEQFELDRVEAELGLI--QEKV 295
Query: 128 AKPDFIFQVQYSPQSSIESNWSKL 151
+ IF+ +YS + ++E S L
Sbjct: 296 EELYAIFEREYSARRNVEKRSSVL 319
>sp|Q9ZP54|PARP1_ARATH Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1
PE=1 SV=2
Length = 983
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 153 LGRKKILHAFHGSRLENFHSILNFGLQ----QHFNKNSLFGQGIYLS 195
LG K +L +HGSRL NF ILN GL+ + +FG+GIY +
Sbjct: 825 LGNKMLL--WHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFA 869
>sp|Q5CZC0|FSIP2_HUMAN Fibrous sheath-interacting protein 2 OS=Homo sapiens GN=FSIP2 PE=2
SV=4
Length = 6907
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 66 INQMPLLSSVLHSQRNSHPSPKLCDLIYLLHWLLVEQSPSLEEVPRDQYDSVLNLVSCE- 124
I + +L+ LH+ ++ P+ CD+ + +WLL E + S+++ R L+++S +
Sbjct: 156 IKEQRILAKQLHNIPENNQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHRYLDMISRKL 215
Query: 125 ---PNVAKPDFIFQVQYSPQSSIESNWSKLSLGRK 156
A+ +F + + E KL+L RK
Sbjct: 216 EQLERTAEEQRLFLMDREERRQREHTRRKLTLRRK 250
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,034,809
Number of Sequences: 539616
Number of extensions: 4462817
Number of successful extensions: 8378
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 8355
Number of HSP's gapped (non-prelim): 16
length of query: 291
length of database: 191,569,459
effective HSP length: 116
effective length of query: 175
effective length of database: 128,974,003
effective search space: 22570450525
effective search space used: 22570450525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)