Query psy5399
Match_columns 156
No_of_seqs 106 out of 1201
Neff 9.0
Searched_HMMs 29240
Date Sat Aug 17 01:34:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5399.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5399hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mng_A Peroxiredoxin-5, mitoch 100.0 1.4E-38 4.7E-43 227.3 14.2 154 2-156 14-171 (173)
2 4gqc_A Thiol peroxidase, perox 100.0 5.2E-39 1.8E-43 227.5 10.8 140 2-146 4-145 (164)
3 4g2e_A Peroxiredoxin; redox pr 100.0 2.1E-38 7.2E-43 222.8 13.6 140 1-146 2-143 (157)
4 3uma_A Hypothetical peroxiredo 100.0 2.1E-37 7.1E-42 223.2 13.2 155 1-156 24-182 (184)
5 2wfc_A Peroxiredoxin 5, PRDX5; 100.0 2.3E-36 8E-41 214.6 13.0 154 1-155 1-156 (167)
6 1tp9_A Peroxiredoxin, PRX D (t 100.0 1.5E-35 5E-40 209.0 15.3 152 1-156 2-160 (162)
7 2xhf_A Peroxiredoxin 5; oxidor 100.0 2.5E-35 8.4E-40 209.8 15.4 153 2-156 13-167 (171)
8 3sbc_A Peroxiredoxin TSA1; alp 100.0 6.2E-36 2.1E-40 219.5 11.3 146 1-155 21-176 (216)
9 4f82_A Thioredoxin reductase; 100.0 8.2E-35 2.8E-39 207.6 13.5 151 2-155 9-171 (176)
10 3tue_A Tryparedoxin peroxidase 100.0 2.3E-34 8E-39 211.5 13.5 143 3-155 26-180 (219)
11 2pwj_A Mitochondrial peroxired 100.0 1.8E-33 6.1E-38 200.3 16.0 150 5-155 9-168 (171)
12 1xiy_A Peroxiredoxin, pfaop; a 100.0 2.5E-33 8.7E-38 201.4 13.3 150 3-155 1-174 (182)
13 2v2g_A Peroxiredoxin 6; oxidor 100.0 5.5E-33 1.9E-37 206.8 11.0 148 1-155 1-160 (233)
14 3ixr_A Bacterioferritin comigr 100.0 4.4E-33 1.5E-37 199.3 8.4 132 2-139 20-158 (179)
15 1nm3_A Protein HI0572; hybrid, 100.0 5.9E-32 2E-36 201.5 14.5 142 1-146 1-148 (241)
16 3gkn_A Bacterioferritin comigr 100.0 1.9E-32 6.5E-37 192.3 11.1 131 3-139 7-142 (163)
17 2c0d_A Thioredoxin peroxidase 100.0 4.7E-32 1.6E-36 200.3 13.4 141 1-152 22-176 (221)
18 1xcc_A 1-Cys peroxiredoxin; un 100.0 2E-32 6.8E-37 202.2 11.2 148 1-155 1-161 (220)
19 3drn_A Peroxiredoxin, bacterio 100.0 3.1E-32 1.1E-36 191.4 11.2 137 2-150 1-139 (161)
20 1q98_A Thiol peroxidase, TPX; 100.0 8.8E-32 3E-36 190.0 13.1 133 1-143 15-151 (165)
21 3zrd_A Thiol peroxidase; oxido 100.0 1.3E-31 4.4E-36 195.1 12.7 131 2-142 51-185 (200)
22 3tjj_A Peroxiredoxin-4; thiore 100.0 1.7E-31 5.9E-36 201.1 13.3 145 2-155 61-215 (254)
23 3qpm_A Peroxiredoxin; oxidored 100.0 7.4E-32 2.5E-36 201.5 11.1 146 1-155 46-201 (240)
24 3p7x_A Probable thiol peroxida 100.0 1E-31 3.5E-36 189.7 10.9 130 1-143 18-150 (166)
25 1n8j_A AHPC, alkyl hydroperoxi 100.0 1.7E-31 5.8E-36 192.2 11.9 140 4-153 2-149 (186)
26 2i81_A 2-Cys peroxiredoxin; st 100.0 2.1E-31 7.3E-36 195.7 11.5 142 2-154 20-174 (213)
27 2pn8_A Peroxiredoxin-4; thiore 100.0 1.2E-31 4.2E-36 196.7 10.3 143 2-153 18-170 (211)
28 3keb_A Probable thiol peroxida 100.0 8.8E-31 3E-35 193.3 14.6 131 2-145 21-160 (224)
29 1prx_A HORF6; peroxiredoxin, h 100.0 1.6E-31 5.6E-36 197.8 10.2 145 3-154 5-163 (224)
30 1uul_A Tryparedoxin peroxidase 100.0 5.2E-31 1.8E-35 191.7 11.3 144 1-154 4-159 (202)
31 1psq_A Probable thiol peroxida 100.0 3.8E-31 1.3E-35 186.3 10.1 131 1-143 14-147 (163)
32 2h01_A 2-Cys peroxiredoxin; th 100.0 1.3E-30 4.6E-35 187.9 13.1 140 4-154 1-153 (192)
33 1zye_A Thioredoxin-dependent p 100.0 2.2E-30 7.7E-35 191.0 13.3 145 2-155 26-180 (220)
34 1we0_A Alkyl hydroperoxide red 100.0 4.9E-30 1.7E-34 184.1 14.4 141 3-153 1-150 (187)
35 2yzh_A Probable thiol peroxida 100.0 1.7E-30 5.8E-35 184.1 9.7 130 2-142 20-153 (171)
36 1qmv_A Human thioredoxin perox 100.0 3.5E-30 1.2E-34 186.5 10.9 143 2-154 4-157 (197)
37 3ztl_A Thioredoxin peroxidase; 100.0 2.4E-30 8.1E-35 191.1 10.1 144 1-154 38-192 (222)
38 1zof_A Alkyl hydroperoxide-red 100.0 1.3E-29 4.4E-34 183.6 13.4 140 3-153 1-154 (198)
39 2a4v_A Peroxiredoxin DOT5; yea 100.0 1.2E-30 4.1E-35 182.8 7.4 130 2-142 6-137 (159)
40 2bmx_A Alkyl hydroperoxidase C 100.0 8.6E-30 3E-34 184.2 11.8 140 2-152 3-162 (195)
41 3a2v_A Probable peroxiredoxin; 100.0 4.7E-30 1.6E-34 192.5 10.1 144 2-155 4-157 (249)
42 1xvw_A Hypothetical protein RV 100.0 5.7E-30 1.9E-34 179.0 9.7 134 2-145 8-145 (160)
43 4eo3_A Bacterioferritin comigr 100.0 5.1E-29 1.7E-33 193.3 8.7 120 7-142 2-122 (322)
44 3u5r_E Uncharacterized protein 100.0 1.7E-28 5.7E-33 180.6 11.0 122 2-140 31-162 (218)
45 1xvq_A Thiol peroxidase; thior 100.0 4.2E-28 1.4E-32 172.6 12.7 131 1-142 16-149 (175)
46 2jsy_A Probable thiol peroxida 100.0 1.6E-28 5.5E-33 172.9 8.1 129 1-142 16-148 (167)
47 3gl3_A Putative thiol:disulfid 100.0 1.4E-27 4.9E-32 165.0 12.3 125 1-143 1-127 (152)
48 1xzo_A BSSCO, hypothetical pro 99.9 2.9E-27 9.9E-32 167.0 12.8 133 2-142 6-156 (174)
49 2lrn_A Thiol:disulfide interch 99.9 7.8E-28 2.7E-32 166.9 9.5 123 1-140 1-128 (152)
50 3lor_A Thiol-disulfide isomera 99.9 5.4E-28 1.8E-32 168.4 8.0 139 1-155 1-154 (160)
51 3eyt_A Uncharacterized protein 99.9 5.4E-28 1.8E-32 168.3 7.5 135 4-155 1-151 (158)
52 3ewl_A Uncharacterized conserv 99.9 2.6E-27 8.8E-32 162.1 9.8 117 4-137 2-125 (142)
53 3hcz_A Possible thiol-disulfid 99.9 2.9E-27 9.9E-32 162.3 9.7 124 2-141 4-131 (148)
54 3fw2_A Thiol-disulfide oxidore 99.9 1.9E-27 6.3E-32 164.6 8.1 121 2-139 4-134 (150)
55 3lwa_A Secreted thiol-disulfid 99.9 6E-27 2.1E-31 167.1 10.5 138 3-154 31-179 (183)
56 2gs3_A PHGPX, GPX-4, phospholi 99.9 6.8E-27 2.3E-31 167.7 10.5 145 3-154 23-184 (185)
57 3kcm_A Thioredoxin family prot 99.9 6.3E-27 2.1E-31 162.1 9.9 124 2-142 1-127 (154)
58 3eur_A Uncharacterized protein 99.9 5.3E-27 1.8E-31 161.0 9.2 122 2-140 4-132 (142)
59 2obi_A PHGPX, GPX-4, phospholi 99.9 5.8E-27 2E-31 167.5 9.8 146 2-154 20-182 (183)
60 2cvb_A Probable thiol-disulfid 99.9 9E-27 3.1E-31 166.9 10.0 119 2-138 6-133 (188)
61 2l5o_A Putative thioredoxin; s 99.9 1.2E-26 4.1E-31 160.5 9.9 136 2-154 1-139 (153)
62 2f9s_A Thiol-disulfide oxidore 99.9 1E-26 3.5E-31 160.8 9.1 123 4-143 1-125 (151)
63 2v1m_A Glutathione peroxidase; 99.9 1.5E-26 5.1E-31 162.4 9.6 140 3-155 5-166 (169)
64 3kh7_A Thiol:disulfide interch 99.9 1.9E-26 6.5E-31 164.2 10.0 132 2-154 29-165 (176)
65 2p31_A CL683, glutathione pero 99.9 4E-27 1.4E-31 168.3 5.8 139 3-155 23-180 (181)
66 2ywi_A Hypothetical conserved 99.9 2.7E-26 9.2E-31 165.1 9.4 122 3-140 18-149 (196)
67 2lja_A Putative thiol-disulfid 99.9 4.2E-26 1.4E-30 157.6 9.7 125 1-141 1-128 (152)
68 4fo5_A Thioredoxin-like protei 99.9 9E-28 3.1E-32 165.0 1.3 121 2-140 6-132 (143)
69 1jfu_A Thiol:disulfide interch 99.9 1.1E-26 3.9E-31 166.0 7.0 129 2-142 33-164 (186)
70 3fkf_A Thiol-disulfide oxidore 99.9 2.2E-26 7.6E-31 157.8 7.9 121 2-139 4-132 (148)
71 2p5q_A Glutathione peroxidase 99.9 2.7E-26 9.2E-31 161.3 8.5 142 2-155 5-167 (170)
72 4h86_A Peroxiredoxin type-2; o 99.9 5.5E-25 1.9E-29 158.3 14.8 155 1-156 24-197 (199)
73 3dwv_A Glutathione peroxidase- 99.9 9.6E-27 3.3E-31 167.2 5.5 139 3-155 20-182 (187)
74 2b5x_A YKUV protein, TRXY; thi 99.9 4.9E-26 1.7E-30 156.0 8.7 135 3-155 1-144 (148)
75 2vup_A Glutathione peroxidase- 99.9 2.9E-26 1E-30 165.0 6.9 140 3-155 22-184 (190)
76 3or5_A Thiol:disulfide interch 99.9 1E-25 3.4E-30 157.5 8.8 141 2-154 7-149 (165)
77 2lrt_A Uncharacterized protein 99.9 7.2E-26 2.5E-30 157.5 7.4 121 3-142 9-134 (152)
78 2f8a_A Glutathione peroxidase 99.9 2E-25 6.9E-30 163.3 9.2 145 4-155 21-206 (208)
79 3hdc_A Thioredoxin family prot 99.9 8.8E-26 3E-30 157.5 6.9 123 2-143 14-137 (158)
80 2ggt_A SCO1 protein homolog, m 99.9 3.2E-25 1.1E-29 154.9 9.4 141 8-155 2-160 (164)
81 3kij_A Probable glutathione pe 99.9 1.3E-25 4.5E-30 160.2 7.0 142 4-155 13-169 (180)
82 2i3y_A Epididymal secretory gl 99.9 2.7E-25 9.3E-30 163.4 8.2 144 4-155 30-210 (215)
83 3cmi_A Peroxiredoxin HYR1; thi 99.9 1.1E-25 3.8E-30 159.1 5.7 136 5-155 8-167 (171)
84 3ia1_A THIO-disulfide isomeras 99.9 2.1E-25 7E-30 154.5 6.9 121 2-143 4-131 (154)
85 3erw_A Sporulation thiol-disul 99.9 4.5E-25 1.5E-29 150.6 8.4 122 3-142 9-135 (145)
86 3me7_A Putative uncharacterize 99.9 5.6E-25 1.9E-29 155.9 8.6 135 3-143 1-148 (170)
87 3ha9_A Uncharacterized thiored 99.9 1.4E-25 4.8E-30 157.3 5.3 114 3-136 11-145 (165)
88 2b7k_A SCO1 protein; metalloch 99.9 8.4E-25 2.9E-29 158.7 9.5 145 3-154 13-177 (200)
89 2ls5_A Uncharacterized protein 99.9 1.4E-26 4.8E-31 161.5 0.0 124 2-140 6-133 (159)
90 2hyx_A Protein DIPZ; thioredox 99.9 4.9E-25 1.7E-29 172.6 8.6 134 3-153 51-196 (352)
91 4hde_A SCO1/SENC family lipopr 99.9 7.9E-24 2.7E-28 150.1 13.2 147 4-155 7-169 (170)
92 2k6v_A Putative cytochrome C o 99.9 1.6E-25 5.3E-30 157.6 4.0 130 4-142 11-157 (172)
93 3raz_A Thioredoxin-related pro 99.9 4.2E-25 1.4E-29 152.9 5.7 121 9-143 3-127 (151)
94 2b1k_A Thiol:disulfide interch 99.9 2.9E-24 9.8E-29 151.0 10.0 132 3-154 22-158 (168)
95 2r37_A Glutathione peroxidase 99.9 2.2E-24 7.4E-29 157.8 9.2 143 5-155 13-192 (207)
96 1zzo_A RV1677; thioredoxin fol 99.9 2.8E-24 9.6E-29 145.0 9.1 119 5-143 1-122 (136)
97 2rli_A SCO2 protein homolog, m 99.9 4.2E-24 1.4E-28 150.3 10.1 138 10-154 7-162 (171)
98 1lu4_A Soluble secreted antige 99.9 2.5E-24 8.5E-29 145.6 8.2 113 7-139 2-116 (136)
99 4evm_A Thioredoxin family prot 99.9 5.5E-24 1.9E-28 143.4 7.2 118 8-143 1-126 (138)
100 1kng_A Thiol:disulfide interch 99.9 1E-23 3.6E-28 145.9 7.0 122 3-144 8-140 (156)
101 1i5g_A Tryparedoxin II; electr 99.9 2.7E-23 9.2E-28 142.6 4.0 119 5-139 3-127 (144)
102 1o8x_A Tryparedoxin, TRYX, TXN 99.9 5.3E-23 1.8E-27 141.5 3.5 120 3-139 2-127 (146)
103 2h30_A Thioredoxin, peptide me 99.9 3.1E-23 1.1E-27 144.7 2.3 121 5-143 16-143 (164)
104 3s9f_A Tryparedoxin; thioredox 99.9 1.3E-23 4.4E-28 148.1 -0.4 121 2-139 21-147 (165)
105 1o73_A Tryparedoxin; electron 99.9 8.2E-23 2.8E-27 139.9 3.4 121 2-139 1-127 (144)
106 2lus_A Thioredoxion; CR-Trp16, 99.8 2E-23 6.8E-28 142.5 0.0 123 7-143 2-130 (143)
107 2l57_A Uncharacterized protein 99.4 2.2E-14 7.6E-19 95.8 1.8 99 7-142 4-103 (126)
108 2ju5_A Thioredoxin disulfide i 99.4 8.3E-15 2.8E-19 101.7 -2.4 108 4-142 25-136 (154)
109 2fwh_A Thiol:disulfide interch 99.4 1E-14 3.4E-19 98.9 -4.0 101 4-140 5-112 (134)
110 3ul3_B Thioredoxin, thioredoxi 99.3 2.2E-12 7.4E-17 86.5 4.2 96 5-141 20-115 (128)
111 3hxs_A Thioredoxin, TRXP; elec 99.3 3.5E-12 1.2E-16 86.5 4.2 86 17-141 38-124 (141)
112 2kuc_A Putative disulphide-iso 99.2 3.2E-12 1.1E-16 85.5 1.0 88 20-143 17-108 (130)
113 3p2a_A Thioredoxin 2, putative 99.2 1.1E-11 3.9E-16 84.8 3.8 99 5-142 31-129 (148)
114 2voc_A Thioredoxin; electron t 99.2 6E-11 2E-15 77.5 6.8 77 30-143 16-92 (112)
115 3fk8_A Disulphide isomerase; A 99.2 9.8E-12 3.4E-16 83.5 2.9 81 29-140 27-110 (133)
116 3qfa_C Thioredoxin; protein-pr 99.1 1.3E-11 4.5E-16 81.3 2.2 74 30-141 30-103 (116)
117 3die_A Thioredoxin, TRX; elect 99.1 4.2E-11 1.5E-15 76.8 4.0 78 29-143 17-94 (106)
118 1t00_A Thioredoxin, TRX; redox 99.1 4.8E-11 1.6E-15 77.6 4.2 77 30-143 22-98 (112)
119 3f9u_A Putative exported cytoc 99.1 2.9E-12 1E-16 89.9 -2.0 107 22-142 39-151 (172)
120 1nsw_A Thioredoxin, TRX; therm 99.1 5.3E-11 1.8E-15 76.4 4.0 77 30-143 16-92 (105)
121 1dby_A Chloroplast thioredoxin 99.1 5.2E-11 1.8E-15 76.7 3.8 77 30-143 18-94 (107)
122 2j23_A Thioredoxin; immune pro 99.1 6.1E-11 2.1E-15 78.6 3.9 76 30-141 32-107 (121)
123 2pu9_C TRX-F, thioredoxin F-ty 99.1 5.9E-11 2E-15 77.2 3.7 74 30-141 23-97 (111)
124 3f3q_A Thioredoxin-1; His TAG, 99.1 5.7E-11 2E-15 77.3 3.5 74 30-141 23-96 (109)
125 2vlu_A Thioredoxin, thioredoxi 99.1 2.6E-11 9E-16 80.1 1.6 99 5-142 8-107 (122)
126 1faa_A Thioredoxin F; electron 99.1 9.1E-11 3.1E-15 77.7 4.3 76 30-142 36-111 (124)
127 2o8v_B Thioredoxin 1; disulfid 99.1 6.2E-11 2.1E-15 79.6 3.2 77 30-143 39-115 (128)
128 3zzx_A Thioredoxin; oxidoreduc 99.1 1.5E-10 5E-15 75.4 4.9 74 29-140 18-91 (105)
129 3d6i_A Monothiol glutaredoxin- 99.1 9.2E-11 3.2E-15 76.3 3.9 75 31-141 21-95 (112)
130 3d22_A TRXH4, thioredoxin H-ty 99.1 6.1E-11 2.1E-15 80.2 2.9 75 29-141 44-118 (139)
131 1ep7_A Thioredoxin CH1, H-type 99.1 1E-10 3.6E-15 75.9 3.8 74 31-141 24-97 (112)
132 1thx_A Thioredoxin, thioredoxi 99.1 2.3E-10 7.8E-15 74.4 5.4 76 30-142 24-99 (115)
133 1x5d_A Protein disulfide-isome 99.1 2.4E-10 8.2E-15 76.3 5.6 76 30-141 24-102 (133)
134 2dj0_A Thioredoxin-related tra 99.0 7.5E-10 2.6E-14 74.8 8.1 84 30-143 25-108 (137)
135 3dxb_A Thioredoxin N-terminall 99.0 1.2E-10 4E-15 85.2 4.2 97 8-142 8-104 (222)
136 1xfl_A Thioredoxin H1; AT3G510 99.0 8.9E-11 3E-15 78.3 3.2 73 30-140 37-109 (124)
137 3qou_A Protein YBBN; thioredox 99.0 5E-10 1.7E-14 84.4 7.4 77 30-143 25-101 (287)
138 3tco_A Thioredoxin (TRXA-1); d 99.0 1.6E-10 5.5E-15 74.3 3.9 78 29-143 19-96 (109)
139 2ppt_A Thioredoxin-2; thiredox 99.0 1.5E-10 5.1E-15 80.3 4.0 76 30-142 63-138 (155)
140 3m9j_A Thioredoxin; oxidoreduc 99.0 1.9E-10 6.6E-15 73.6 4.2 75 29-141 18-92 (105)
141 1w4v_A Thioredoxin, mitochondr 99.0 1.9E-10 6.4E-15 75.9 3.9 75 30-141 30-104 (119)
142 4euy_A Uncharacterized protein 99.0 1.2E-10 3.9E-15 75.2 2.8 76 30-143 17-92 (105)
143 2trx_A Thioredoxin; electron t 99.0 2.2E-10 7.6E-15 73.8 4.0 77 30-143 19-95 (108)
144 2dj1_A Protein disulfide-isome 99.0 2.9E-10 1E-14 76.7 4.4 81 18-133 22-102 (140)
145 1fb6_A Thioredoxin M; electron 99.0 1.8E-10 6.3E-15 73.7 3.2 77 30-143 17-93 (105)
146 2e0q_A Thioredoxin; electron t 99.0 2.3E-10 7.9E-15 72.8 3.6 75 30-142 15-89 (104)
147 2i4a_A Thioredoxin; acidophIle 99.0 3.4E-10 1.2E-14 72.6 4.4 76 30-142 19-94 (107)
148 2vim_A Thioredoxin, TRX; thior 99.0 2.8E-10 9.4E-15 72.7 3.9 73 30-140 18-90 (104)
149 1xwb_A Thioredoxin; dimerizati 99.0 3.6E-10 1.2E-14 72.4 4.1 75 29-140 18-92 (106)
150 3emx_A Thioredoxin; structural 99.0 1.3E-10 4.3E-15 78.6 1.8 86 29-145 30-115 (135)
151 2xc2_A Thioredoxinn; oxidoredu 99.0 2.6E-10 8.9E-15 74.8 3.3 73 29-140 31-103 (117)
152 3gix_A Thioredoxin-like protei 99.0 3.2E-10 1.1E-14 78.1 3.8 78 30-144 22-99 (149)
153 1syr_A Thioredoxin; SGPP, stru 99.0 3.7E-10 1.3E-14 73.6 3.6 74 30-141 25-98 (112)
154 2lst_A Thioredoxin; structural 98.5 7.8E-11 2.7E-15 78.7 0.0 86 20-141 9-101 (130)
155 2l5l_A Thioredoxin; structural 98.9 3.3E-10 1.1E-14 76.5 3.0 72 31-140 38-110 (136)
156 3hz4_A Thioredoxin; NYSGXRC, P 98.9 6.6E-10 2.3E-14 75.4 4.5 77 30-143 23-99 (140)
157 1r26_A Thioredoxin; redox-acti 98.9 7.4E-10 2.5E-14 74.0 4.5 73 30-140 36-108 (125)
158 3gnj_A Thioredoxin domain prot 98.9 6.1E-10 2.1E-14 72.0 3.9 76 30-142 21-96 (111)
159 2oe3_A Thioredoxin-3; electron 98.9 7E-10 2.4E-14 72.8 4.1 75 30-142 29-103 (114)
160 1oaz_A Thioredoxin 1; immune s 98.9 2.6E-09 9E-14 71.1 7.0 77 30-143 20-110 (123)
161 2i1u_A Thioredoxin, TRX, MPT46 98.9 7E-10 2.4E-14 72.8 3.9 77 30-143 29-105 (121)
162 1gh2_A Thioredoxin-like protei 98.9 6.6E-10 2.2E-14 71.6 3.7 74 30-141 20-93 (107)
163 2f51_A Thioredoxin; electron t 98.9 6.8E-10 2.3E-14 73.3 3.8 87 18-142 8-100 (118)
164 2dml_A Protein disulfide-isome 98.9 8.1E-10 2.8E-14 73.6 4.1 74 30-140 34-108 (130)
165 2yj7_A LPBCA thioredoxin; oxid 98.4 1.2E-10 4.1E-15 74.4 0.0 76 30-142 18-93 (106)
166 2yzu_A Thioredoxin; redox prot 98.9 6.7E-10 2.3E-14 71.3 3.5 76 30-142 17-92 (109)
167 3cxg_A Putative thioredoxin; m 98.9 2.3E-10 8E-15 77.2 1.3 77 25-141 35-115 (133)
168 1x5e_A Thioredoxin domain cont 98.9 6.6E-10 2.2E-14 73.8 3.5 71 27-134 19-89 (126)
169 2vm1_A Thioredoxin, thioredoxi 98.9 8.4E-10 2.9E-14 72.1 3.8 73 30-140 27-99 (118)
170 1ti3_A Thioredoxin H, PTTRXH1; 98.9 6.4E-10 2.2E-14 72.1 2.9 73 30-140 25-97 (113)
171 2l6c_A Thioredoxin; oxidoreduc 98.9 1.3E-09 4.5E-14 70.9 4.0 75 29-141 17-91 (110)
172 1zma_A Bacterocin transport ac 98.9 2.4E-09 8.2E-14 70.3 5.4 78 30-140 28-105 (118)
173 1mek_A Protein disulfide isome 98.9 9.4E-10 3.2E-14 71.8 3.2 70 30-135 23-94 (120)
174 2wz9_A Glutaredoxin-3; protein 98.9 2.2E-09 7.6E-14 73.9 5.2 74 30-141 31-104 (153)
175 1qgv_A Spliceosomal protein U5 98.8 1.8E-09 6.1E-14 73.8 3.9 75 30-141 22-96 (142)
176 3apq_A DNAJ homolog subfamily 98.8 2.8E-10 9.4E-15 82.5 -0.9 85 18-140 102-186 (210)
177 2dj3_A Protein disulfide-isome 98.8 8.7E-10 3E-14 73.7 1.4 54 8-64 3-56 (133)
178 1nho_A Probable thioredoxin; b 98.8 1.2E-08 4E-13 62.7 6.0 62 34-134 4-65 (85)
179 3idv_A Protein disulfide-isome 98.8 3.8E-09 1.3E-13 77.2 4.0 81 18-135 20-102 (241)
180 1v98_A Thioredoxin; oxidoreduc 98.8 4.2E-09 1.4E-13 71.2 3.8 88 18-143 38-125 (140)
181 1wmj_A Thioredoxin H-type; str 98.8 7.6E-10 2.6E-14 73.6 -0.3 73 30-140 35-107 (130)
182 3uvt_A Thioredoxin domain-cont 98.8 2E-09 6.7E-14 69.4 1.6 77 29-141 19-97 (111)
183 1z6n_A Hypothetical protein PA 98.7 4.3E-10 1.5E-14 79.2 -2.1 46 25-76 49-94 (167)
184 1fo5_A Thioredoxin; disulfide 98.7 1.3E-08 4.4E-13 62.5 4.5 41 32-76 3-43 (85)
185 1a8l_A Protein disulfide oxido 98.7 2.3E-08 8E-13 72.5 5.9 77 31-143 133-213 (226)
186 2av4_A Thioredoxin-like protei 98.7 1.8E-08 6.1E-13 70.0 4.6 74 30-140 40-113 (160)
187 1a0r_P Phosducin, MEKA, PP33; 98.6 7.9E-09 2.7E-13 77.0 2.2 86 31-155 133-221 (245)
188 2dbc_A PDCL2, unnamed protein 98.6 6.2E-09 2.1E-13 70.3 0.6 71 31-142 30-100 (135)
189 1wou_A Thioredoxin -related pr 98.6 1.6E-08 5.3E-13 67.1 2.0 72 30-131 23-101 (123)
190 2qgv_A Hydrogenase-1 operon pr 98.6 2.1E-08 7.3E-13 68.4 2.3 78 30-143 33-112 (140)
191 1sen_A Thioredoxin-like protei 98.5 1.4E-09 4.7E-14 76.1 -4.1 86 21-141 37-123 (164)
192 3t58_A Sulfhydryl oxidase 1; o 98.5 1.9E-08 6.6E-13 82.3 1.7 76 31-140 30-111 (519)
193 3q6o_A Sulfhydryl oxidase 1; p 98.5 2.4E-08 8.1E-13 73.7 1.4 67 31-131 30-98 (244)
194 3ed3_A Protein disulfide-isome 98.5 4.7E-08 1.6E-12 74.6 3.1 70 30-134 34-103 (298)
195 2qsi_A Putative hydrogenase ex 98.5 7.8E-08 2.7E-12 65.4 3.5 77 32-145 34-112 (137)
196 3idv_A Protein disulfide-isome 98.5 3.6E-07 1.2E-11 66.6 7.3 71 30-136 146-218 (241)
197 3ira_A Conserved protein; meth 98.5 5.4E-08 1.8E-12 68.8 2.2 87 21-138 30-121 (173)
198 2hls_A Protein disulfide oxido 98.4 3.2E-07 1.1E-11 67.9 5.8 44 29-75 136-182 (243)
199 3evi_A Phosducin-like protein 98.4 1.7E-07 5.7E-12 62.2 3.1 83 32-155 24-109 (118)
200 2trc_P Phosducin, MEKA, PP33; 98.4 5.9E-08 2E-12 70.9 0.9 72 31-141 120-191 (217)
201 2djj_A PDI, protein disulfide- 98.4 1.6E-07 5.6E-12 61.3 2.7 56 18-76 12-71 (121)
202 3aps_A DNAJ homolog subfamily 98.4 8.1E-08 2.8E-12 63.0 1.2 68 30-134 20-88 (122)
203 3iv4_A Putative oxidoreductase 98.4 6.4E-07 2.2E-11 58.7 5.3 77 31-141 24-100 (112)
204 3ph9_A Anterior gradient prote 98.3 4.9E-08 1.7E-12 67.5 -0.2 76 29-141 42-120 (151)
205 2es7_A Q8ZP25_salty, putative 98.3 1.3E-07 4.5E-12 64.6 1.6 75 32-143 35-112 (142)
206 2r2j_A Thioredoxin domain-cont 98.3 5E-07 1.7E-11 70.9 4.9 72 30-137 21-97 (382)
207 3kp8_A Vkorc1/thioredoxin doma 98.3 1.1E-08 3.7E-13 66.6 -4.4 39 21-62 3-41 (106)
208 1sji_A Calsequestrin 2, calseq 98.3 1.5E-06 5.1E-11 67.3 6.5 68 30-134 27-101 (350)
209 2b5e_A Protein disulfide-isome 98.2 2.8E-07 9.7E-12 74.6 2.0 69 30-134 30-98 (504)
210 1ilo_A Conserved hypothetical 98.2 2.7E-06 9.1E-11 51.0 5.4 27 35-63 3-29 (77)
211 3h79_A Thioredoxin-like protei 98.2 9.8E-07 3.3E-11 58.3 3.3 69 30-134 32-105 (127)
212 3f8u_A Protein disulfide-isome 98.2 1.2E-06 4.1E-11 70.5 3.9 72 32-140 22-93 (481)
213 3gyk_A 27KDA outer membrane pr 98.1 1.9E-07 6.6E-12 65.2 -0.9 42 19-63 11-52 (175)
214 3apo_A DNAJ homolog subfamily 98.0 1.8E-06 6.3E-11 73.3 2.8 68 30-134 454-521 (780)
215 3dml_A Putative uncharacterize 98.0 7.6E-07 2.6E-11 58.8 -0.3 79 31-143 18-97 (116)
216 3f8u_A Protein disulfide-isome 98.0 7.9E-07 2.7E-11 71.5 -0.5 34 30-65 369-402 (481)
217 2ywm_A Glutaredoxin-like prote 97.9 3.4E-06 1.2E-10 61.2 2.6 41 31-76 135-176 (229)
218 3apo_A DNAJ homolog subfamily 97.9 1.4E-06 4.7E-11 74.1 0.4 73 30-139 674-746 (780)
219 2znm_A Thiol:disulfide interch 97.9 6.4E-06 2.2E-10 58.3 3.6 41 30-74 21-61 (195)
220 1eej_A Thiol:disulfide interch 97.9 1.8E-06 6.2E-11 62.7 0.7 38 30-74 85-122 (216)
221 3hd5_A Thiol:disulfide interch 97.9 5E-07 1.7E-11 64.3 -2.3 42 30-75 24-65 (195)
222 3qcp_A QSOX from trypanosoma b 97.9 3E-06 1E-10 68.4 1.7 43 31-76 42-91 (470)
223 3uem_A Protein disulfide-isome 97.7 7.8E-06 2.7E-10 63.3 0.9 34 30-65 266-299 (361)
224 3h93_A Thiol:disulfide interch 97.6 5E-06 1.7E-10 58.9 -0.7 33 30-64 24-56 (192)
225 3ga4_A Dolichyl-diphosphooligo 97.6 4.5E-05 1.5E-09 53.9 4.0 30 32-63 38-74 (178)
226 2dlx_A UBX domain-containing p 97.5 0.00014 4.7E-09 50.1 5.2 19 30-49 41-59 (153)
227 3us3_A Calsequestrin-1; calciu 97.4 0.00014 4.9E-09 56.6 5.1 67 31-134 30-103 (367)
228 2ywm_A Glutaredoxin-like prote 97.4 6.6E-05 2.3E-09 54.3 2.8 33 31-63 20-55 (229)
229 2e7p_A Glutaredoxin; thioredox 97.4 1.7E-05 5.9E-10 51.3 -0.6 29 27-58 15-43 (116)
230 2b5e_A Protein disulfide-isome 97.4 6E-05 2.1E-09 60.9 2.3 44 30-76 375-418 (504)
231 1v58_A Thiol:disulfide interch 97.2 8.6E-05 2.9E-09 54.7 1.6 38 30-73 96-133 (241)
232 2rem_A Disulfide oxidoreductas 97.1 7.2E-05 2.4E-09 52.7 -0.2 39 31-73 25-63 (193)
233 1a8l_A Protein disulfide oxido 97.0 0.00055 1.9E-08 49.1 3.9 56 32-92 22-78 (226)
234 1ego_A Glutaredoxin; electron 96.9 7.9E-05 2.7E-09 45.3 -1.2 37 35-76 3-39 (85)
235 2k8s_A Thioredoxin; dimer, str 96.9 7.1E-05 2.4E-09 45.3 -1.6 24 35-60 4-27 (80)
236 1h75_A Glutaredoxin-like prote 96.8 0.0013 4.3E-08 39.5 3.9 50 39-98 6-55 (81)
237 1wjk_A C330018D20RIK protein; 96.8 9E-05 3.1E-09 47.2 -1.8 51 30-89 14-64 (100)
238 2fgx_A Putative thioredoxin; N 96.6 0.00055 1.9E-08 44.3 0.9 37 34-76 31-67 (107)
239 2klx_A Glutaredoxin; thioredox 96.5 0.0055 1.9E-07 37.5 5.4 50 39-99 11-61 (89)
240 1r7h_A NRDH-redoxin; thioredox 96.4 0.0014 4.7E-08 38.5 2.0 50 39-98 6-55 (75)
241 2djk_A PDI, protein disulfide- 96.2 0.00066 2.3E-08 45.1 -0.2 31 31-64 23-53 (133)
242 1wik_A Thioredoxin-like protei 96.2 0.019 6.7E-07 36.6 6.6 62 26-98 9-75 (109)
243 2yan_A Glutaredoxin-3; oxidore 96.1 0.01 3.5E-07 37.6 5.0 60 29-98 14-77 (105)
244 2lqo_A Putative glutaredoxin R 96.1 0.0089 3E-07 37.4 4.5 43 34-87 6-49 (92)
245 1hyu_A AHPF, alkyl hydroperoxi 95.9 0.0032 1.1E-07 51.2 2.4 54 32-92 117-170 (521)
246 2c0g_A ERP29 homolog, windbeut 95.9 0.0096 3.3E-07 44.1 4.6 42 30-77 32-76 (248)
247 1z6m_A Conserved hypothetical 95.9 0.0033 1.1E-07 43.3 1.9 51 20-74 17-68 (175)
248 2qc7_A ERP31, ERP28, endoplasm 95.7 0.0042 1.4E-07 45.8 2.0 39 31-76 22-63 (240)
249 3hz8_A Thiol:disulfide interch 95.4 0.0015 5.2E-08 46.2 -1.3 40 31-74 24-63 (193)
250 1t3b_A Thiol:disulfide interch 95.3 0.003 1E-07 45.4 0.0 36 31-73 86-121 (211)
251 1fov_A Glutaredoxin 3, GRX3; a 95.3 0.012 4.2E-07 34.9 2.8 50 40-99 7-57 (82)
252 2khp_A Glutaredoxin; thioredox 95.2 0.019 6.6E-07 35.0 3.6 50 40-99 12-62 (92)
253 1kte_A Thioltransferase; redox 95.1 0.0018 6.2E-08 40.8 -1.5 29 27-58 7-35 (105)
254 1un2_A DSBA, thiol-disulfide i 95.0 0.0014 4.6E-08 46.9 -2.5 42 30-75 112-156 (197)
255 3qmx_A Glutaredoxin A, glutare 94.8 0.017 5.6E-07 36.4 2.5 55 32-98 16-72 (99)
256 3rhb_A ATGRXC5, glutaredoxin-C 94.7 0.031 1.1E-06 35.6 3.7 56 31-98 18-78 (113)
257 3feu_A Putative lipoprotein; a 94.7 0.0088 3E-07 41.9 1.0 38 31-74 22-59 (185)
258 3zyw_A Glutaredoxin-3; metal b 94.6 0.053 1.8E-06 34.8 4.7 61 26-98 10-76 (111)
259 1ttz_A Conserved hypothetical 94.6 0.024 8.3E-07 34.9 2.8 21 35-57 3-23 (87)
260 2cq9_A GLRX2 protein, glutared 94.5 0.04 1.4E-06 36.3 3.9 56 31-98 26-85 (130)
261 3h8q_A Thioredoxin reductase 3 94.3 0.045 1.5E-06 35.2 3.8 56 30-97 15-74 (114)
262 3ic4_A Glutaredoxin (GRX-1); s 94.1 0.021 7.2E-07 34.9 1.7 50 40-99 18-73 (92)
263 2ct6_A SH3 domain-binding glut 94.0 0.12 4E-06 33.1 5.3 50 33-87 9-59 (111)
264 3c1r_A Glutaredoxin-1; oxidize 93.8 0.044 1.5E-06 35.5 2.9 50 40-98 31-87 (118)
265 2ht9_A Glutaredoxin-2; thiored 93.7 0.046 1.6E-06 36.9 3.0 56 31-98 48-107 (146)
266 2wci_A Glutaredoxin-4; redox-a 93.6 0.044 1.5E-06 36.7 2.7 58 30-98 33-95 (135)
267 1aba_A Glutaredoxin; electron 93.5 0.15 5.2E-06 30.7 4.9 52 39-99 5-70 (87)
268 3kp9_A Vkorc1/thioredoxin doma 93.5 0.0022 7.5E-08 48.6 -4.3 38 21-61 188-225 (291)
269 2hls_A Protein disulfide oxido 93.4 0.044 1.5E-06 40.0 2.7 56 31-92 25-86 (243)
270 3l9v_A Putative thiol-disulfid 93.4 0.0064 2.2E-07 42.7 -1.8 41 30-74 13-56 (189)
271 3nzn_A Glutaredoxin; structura 93.2 0.1 3.5E-06 32.7 3.9 10 40-49 28-37 (103)
272 3msz_A Glutaredoxin 1; alpha-b 93.0 0.11 3.6E-06 31.1 3.7 44 38-90 8-54 (89)
273 1t1v_A SH3BGRL3, SH3 domain-bi 92.9 0.24 8.1E-06 30.3 5.2 61 34-99 4-66 (93)
274 3ipz_A Monothiol glutaredoxin- 92.6 0.2 6.9E-06 31.8 4.7 61 26-97 12-77 (109)
275 3uem_A Protein disulfide-isome 92.1 0.06 2E-06 41.2 2.0 54 33-91 137-190 (361)
276 2dkh_A 3-hydroxybenzoate hydro 91.9 0.53 1.8E-05 39.1 7.5 122 3-139 467-622 (639)
277 2wem_A Glutaredoxin-related pr 91.8 0.1 3.6E-06 33.9 2.6 63 25-98 13-81 (118)
278 2hze_A Glutaredoxin-1; thiored 91.8 0.011 3.8E-07 38.0 -2.2 14 35-49 21-34 (114)
279 3l78_A Regulatory protein SPX; 91.7 0.17 5.8E-06 32.9 3.6 64 37-111 3-70 (120)
280 3ctg_A Glutaredoxin-2; reduced 91.6 0.097 3.3E-06 34.5 2.3 50 40-98 43-99 (129)
281 1u6t_A SH3 domain-binding glut 90.8 0.66 2.3E-05 30.3 5.7 47 39-88 5-52 (121)
282 3ghf_A Septum site-determining 90.8 0.75 2.6E-05 29.9 6.0 57 26-91 42-98 (120)
283 3fz4_A Putative arsenate reduc 90.4 0.28 9.7E-06 31.9 3.6 63 38-111 7-73 (120)
284 1z3e_A Regulatory protein SPX; 89.9 0.34 1.2E-05 31.9 3.8 63 38-111 5-71 (132)
285 3gkx_A Putative ARSC family re 89.2 0.24 8.3E-06 32.2 2.6 63 38-111 8-74 (120)
286 3l9s_A Thiol:disulfide interch 89.0 0.056 1.9E-06 38.0 -0.7 41 30-74 20-63 (191)
287 3l4n_A Monothiol glutaredoxin- 87.5 0.6 2E-05 30.6 3.7 65 26-98 8-75 (127)
288 3q6o_A Sulfhydryl oxidase 1; p 86.4 2 6.7E-05 30.8 6.3 38 94-141 187-225 (244)
289 3rdw_A Putative arsenate reduc 86.3 0.39 1.3E-05 31.3 2.2 63 38-111 9-76 (121)
290 1s3c_A Arsenate reductase; ARS 85.9 0.36 1.2E-05 32.4 1.9 64 38-112 6-73 (141)
291 4dvc_A Thiol:disulfide interch 85.9 0.08 2.7E-06 36.2 -1.4 33 30-64 20-52 (184)
292 3ihg_A RDME; flavoenzyme, anth 85.6 5.4 0.00018 32.0 9.1 95 3-140 420-516 (535)
293 3tdg_A DSBG, putative uncharac 84.1 0.31 1E-05 36.5 1.0 38 31-74 147-184 (273)
294 2axo_A Hypothetical protein AT 82.9 2.2 7.7E-05 31.7 5.3 53 34-91 44-111 (270)
295 1nm3_A Protein HI0572; hybrid, 82.6 0.45 1.5E-05 34.2 1.4 8 41-48 177-184 (241)
296 3c7m_A Thiol:disulfide interch 82.5 0.19 6.6E-06 34.6 -0.6 40 31-74 17-57 (195)
297 1rw1_A Conserved hypothetical 82.2 1.3 4.4E-05 28.2 3.3 60 38-110 4-67 (114)
298 2jvx_A NF-kappa-B essential mo 81.9 0.81 2.8E-05 21.9 1.7 21 43-64 5-25 (28)
299 3gv1_A Disulfide interchange p 80.1 0.19 6.4E-06 33.9 -1.4 26 31-58 14-39 (147)
300 2ec4_A FAS-associated factor 1 78.4 1.2 4E-05 31.0 2.3 56 30-88 54-111 (178)
301 2kok_A Arsenate reductase; bru 76.2 2.4 8.1E-05 27.2 3.2 60 38-110 9-72 (120)
302 3gn3_A Putative protein-disulf 71.0 0.67 2.3E-05 32.2 -0.5 29 33-62 15-43 (182)
303 3t58_A Sulfhydryl oxidase 1; o 71.0 2.2 7.6E-05 34.6 2.5 39 94-142 187-226 (519)
304 4f9z_D Endoplasmic reticulum r 70.7 3.4 0.00012 29.2 3.2 33 31-64 130-162 (227)
305 2wul_A Glutaredoxin related pr 70.2 3.6 0.00012 26.6 2.9 64 25-95 13-78 (118)
306 1pn0_A Phenol 2-monooxygenase; 67.7 6 0.00021 33.0 4.5 122 3-139 479-630 (665)
307 3bci_A Disulfide bond protein 66.4 0.82 2.8E-05 31.3 -0.9 40 31-73 11-52 (186)
308 3gx8_A Monothiol glutaredoxin- 65.9 20 0.00067 22.8 5.9 62 27-97 11-78 (121)
309 2in3_A Hypothetical protein; D 65.6 3.8 0.00013 28.5 2.5 37 34-73 8-44 (216)
310 3vhs_A ATPase wrnip1; zinc fin 65.6 1.5 5.2E-05 20.3 0.3 12 43-55 8-19 (29)
311 3f0i_A Arsenate reductase; str 63.8 3.8 0.00013 26.3 2.1 66 37-112 7-76 (119)
312 3fhk_A UPF0403 protein YPHP; d 61.0 17 0.00059 24.2 4.8 41 94-138 82-122 (147)
313 2x8g_A Thioredoxin glutathione 58.1 5.8 0.0002 32.3 2.7 56 30-97 16-75 (598)
314 3gmf_A Protein-disulfide isome 57.7 2.5 8.7E-05 29.8 0.4 38 22-62 7-45 (205)
315 3fmw_A Oxygenase; mithramycin, 54.5 8 0.00027 31.6 2.9 35 3-38 445-480 (570)
316 1xhj_A Nitrogen fixation prote 53.8 8.9 0.0003 23.4 2.3 35 18-56 25-59 (88)
317 3o9x_A Uncharacterized HTH-typ 52.1 6.2 0.00021 25.4 1.6 66 29-112 24-98 (133)
318 3gha_A Disulfide bond formatio 51.0 2.4 8.3E-05 29.7 -0.6 41 30-73 28-70 (202)
319 3f4s_A Alpha-DSBA1, putative u 50.3 3.6 0.00012 29.5 0.2 40 22-64 31-71 (226)
320 1kcq_A Gelsolin, brevin, ADF, 49.8 12 0.0004 23.2 2.5 27 126-152 31-57 (104)
321 4as2_A Phosphorylcholine phosp 49.8 16 0.00056 27.7 3.8 36 52-88 145-180 (327)
322 2obb_A Hypothetical protein; s 49.3 25 0.00084 23.3 4.2 45 52-99 26-73 (142)
323 3mjh_B Early endosome antigen 49.1 10 0.00036 18.8 1.8 20 44-64 8-27 (34)
324 4gxt_A A conserved functionall 48.4 18 0.00062 28.0 3.9 39 52-91 223-261 (385)
325 2wm8_A MDP-1, magnesium-depend 46.8 61 0.0021 21.5 6.4 59 52-111 70-136 (187)
326 3fvv_A Uncharacterized protein 46.5 42 0.0014 22.8 5.4 39 52-91 94-132 (232)
327 1l6r_A Hypothetical protein TA 45.5 42 0.0014 23.4 5.3 43 53-98 25-67 (227)
328 1eik_A RNA polymerase subunit 45.3 46 0.0016 19.7 4.8 34 77-111 18-52 (77)
329 3ib6_A Uncharacterized protein 44.9 53 0.0018 21.9 5.6 45 52-97 36-83 (189)
330 2qa2_A CABE, polyketide oxygen 43.7 21 0.00071 28.5 3.7 33 4-38 396-429 (499)
331 3ga8_A HTH-type transcriptiona 43.7 7.2 0.00025 22.9 0.8 20 29-48 24-43 (78)
332 1hmj_A RPB5, protein (subunit 42.2 53 0.0018 19.5 5.3 34 77-111 16-50 (78)
333 2qa1_A PGAE, polyketide oxygen 41.8 21 0.00073 28.4 3.5 33 4-38 395-428 (500)
334 2fpr_A Histidine biosynthesis 41.5 48 0.0016 22.0 4.9 43 52-97 44-101 (176)
335 4ev1_A Anabena TIC22; TIC22 fo 40.3 19 0.00064 26.5 2.7 82 7-101 12-111 (252)
336 1nnl_A L-3-phosphoserine phosp 40.2 39 0.0013 22.9 4.3 39 52-91 88-126 (225)
337 3brc_A Conserved protein of un 39.4 39 0.0013 22.6 3.9 29 117-145 103-132 (156)
338 3e58_A Putative beta-phosphogl 39.2 62 0.0021 21.2 5.2 40 52-92 91-130 (214)
339 2p9j_A Hypothetical protein AQ 38.5 49 0.0017 21.3 4.5 35 56-91 42-76 (162)
340 4e6z_A Apicoplast TIC22, putat 37.3 14 0.00049 27.5 1.7 63 7-80 75-140 (279)
341 3s6j_A Hydrolase, haloacid deh 37.0 70 0.0024 21.4 5.3 40 52-92 93-132 (233)
342 3ktb_A Arsenical resistance op 36.9 48 0.0016 20.9 3.9 56 35-91 7-74 (106)
343 1svq_A Severin; actin-binding; 36.3 13 0.00044 23.6 1.1 27 126-152 41-67 (114)
344 2pib_A Phosphorylated carbohyd 36.1 66 0.0023 21.0 5.0 40 52-92 86-125 (216)
345 3j21_Z 50S ribosomal protein L 35.9 73 0.0025 19.3 6.8 54 55-111 20-77 (99)
346 3iz5_f 60S ribosomal protein L 35.4 83 0.0028 19.8 6.9 52 57-111 33-88 (112)
347 2jya_A AGR_C_3324P, uncharacte 35.1 39 0.0013 21.3 3.2 29 71-101 54-82 (106)
348 2gmw_A D,D-heptose 1,7-bisphos 34.6 78 0.0027 21.5 5.2 39 52-91 52-105 (211)
349 3m9l_A Hydrolase, haloacid deh 34.1 74 0.0025 21.0 5.0 41 53-94 73-113 (205)
350 1w41_A 50S ribosomal protein L 33.6 81 0.0028 19.1 5.8 53 56-111 22-78 (101)
351 2o2x_A Hypothetical protein; s 33.6 65 0.0022 22.0 4.6 39 52-91 58-111 (218)
352 2jad_A Yellow fluorescent prot 33.3 9.4 0.00032 29.6 0.1 18 29-48 258-275 (362)
353 2lnd_A De novo designed protei 33.0 80 0.0027 18.9 5.9 30 53-83 64-93 (112)
354 1wr8_A Phosphoglycolate phosph 32.7 1E+02 0.0035 21.2 5.6 38 53-91 23-60 (231)
355 3um9_A Haloacid dehalogenase, 31.7 86 0.003 20.9 5.0 39 52-91 98-136 (230)
356 2nyv_A Pgpase, PGP, phosphogly 31.7 84 0.0029 21.3 5.0 39 52-91 85-123 (222)
357 2k9k_A TONB2; metal transport; 31.4 34 0.0012 20.9 2.6 15 126-140 45-60 (106)
358 2xsa_A Ogoga, hyaluronoglucosa 31.3 98 0.0033 24.7 5.6 52 48-100 53-116 (447)
359 2no4_A (S)-2-haloacid dehaloge 31.2 95 0.0032 21.1 5.2 38 53-91 108-145 (240)
360 3ir9_A Peptide chain release f 30.3 65 0.0022 21.8 4.0 43 44-88 106-153 (166)
361 3umb_A Dehalogenase-like hydro 30.1 1E+02 0.0035 20.6 5.2 39 52-91 101-139 (233)
362 2hsz_A Novel predicted phospha 29.6 88 0.003 21.6 4.8 38 53-91 117-154 (243)
363 1zrn_A L-2-haloacid dehalogena 29.2 1.1E+02 0.0037 20.5 5.2 38 53-91 98-135 (232)
364 1yd6_A UVRC; DNA binding prote 29.1 35 0.0012 21.1 2.3 21 120-140 12-34 (99)
365 3kzx_A HAD-superfamily hydrola 28.9 71 0.0024 21.5 4.2 39 52-91 105-143 (231)
366 2z1d_A Hydrogenase expression/ 28.8 1.6E+02 0.0053 22.9 6.2 38 36-75 58-98 (372)
367 3jx9_A Putative phosphoheptose 28.3 1.1E+02 0.0039 20.7 5.0 38 29-75 75-112 (170)
368 2lju_A Putative oxidoreductase 28.2 58 0.002 20.6 3.2 28 72-101 63-90 (108)
369 2j07_A Deoxyribodipyrimidine p 27.9 1E+02 0.0034 24.0 5.2 39 52-91 51-89 (420)
370 4hi4_A Aerotaxis transducer AE 27.8 46 0.0016 20.0 2.7 13 126-138 18-31 (121)
371 3si9_A DHDPS, dihydrodipicolin 27.8 1.3E+02 0.0045 22.4 5.7 68 30-107 147-216 (315)
372 3m1y_A Phosphoserine phosphata 27.6 50 0.0017 22.0 3.1 40 52-92 77-116 (217)
373 3a1c_A Probable copper-exporti 27.3 98 0.0034 22.2 4.9 59 52-111 165-224 (287)
374 2pr7_A Haloacid dehalogenase/e 26.7 27 0.00093 21.5 1.5 37 52-89 20-56 (137)
375 1nrw_A Hypothetical protein, h 26.7 1.6E+02 0.0055 20.9 6.0 44 53-99 24-67 (288)
376 1k1e_A Deoxy-D-mannose-octulos 26.4 1E+02 0.0036 20.2 4.6 35 56-91 41-75 (180)
377 4eek_A Beta-phosphoglucomutase 25.9 1.2E+02 0.004 20.9 5.0 39 52-91 112-150 (259)
378 3kd3_A Phosphoserine phosphohy 25.7 89 0.003 20.5 4.1 39 52-91 84-122 (219)
379 2gjf_A Designed protein; proca 25.6 99 0.0034 17.6 3.9 27 71-99 51-77 (78)
380 3ebl_A Gibberellin receptor GI 25.5 1.3E+02 0.0043 22.5 5.3 40 32-74 112-152 (365)
381 3sd7_A Putative phosphatase; s 25.4 89 0.003 21.2 4.2 59 52-111 112-182 (240)
382 1u07_A TONB protein; beta-hair 25.3 56 0.0019 19.2 2.7 15 126-140 30-45 (90)
383 4a18_G RPL30; ribosome, eukary 25.3 1.2E+02 0.0042 18.5 7.0 53 56-111 28-84 (104)
384 4ex6_A ALNB; modified rossman 25.3 93 0.0032 20.9 4.2 39 52-91 106-144 (237)
385 3u5e_c L32, RP73, YL38, 60S ri 25.1 1.2E+02 0.0042 18.5 6.0 53 56-111 28-84 (105)
386 3kzq_A Putative uncharacterize 25.1 12 0.0004 25.9 -0.6 33 36-71 5-37 (208)
387 2v2f_A Penicillin binding prot 24.6 38 0.0013 15.1 1.4 13 126-138 7-20 (26)
388 2ehh_A DHDPS, dihydrodipicolin 24.1 2.1E+02 0.0072 20.9 6.2 72 25-107 121-194 (294)
389 3ibs_A Conserved hypothetical 23.9 1.7E+02 0.0058 19.6 6.9 45 54-101 127-199 (218)
390 2xry_A Deoxyribodipyrimidine p 23.8 2.7E+02 0.0092 21.9 7.4 38 53-91 92-129 (482)
391 3a0s_A Sensor protein; PAS-fol 23.7 64 0.0022 17.1 2.7 13 126-138 5-18 (96)
392 4fe3_A Cytosolic 5'-nucleotida 23.7 1.1E+02 0.0038 22.0 4.6 38 53-91 144-181 (297)
393 4eze_A Haloacid dehalogenase-l 23.6 90 0.0031 23.1 4.1 40 52-92 181-220 (317)
394 3skx_A Copper-exporting P-type 23.6 1.3E+02 0.0045 20.8 4.9 38 53-91 147-184 (280)
395 3kbb_A Phosphorylated carbohyd 23.5 1.4E+02 0.0047 19.8 4.8 43 52-95 86-128 (216)
396 3qfe_A Putative dihydrodipicol 23.3 2.3E+02 0.008 21.0 7.5 69 30-107 138-209 (318)
397 3mmz_A Putative HAD family hyd 23.1 98 0.0033 20.4 3.9 33 58-91 47-79 (176)
398 2o7r_A CXE carboxylesterase; a 23.1 1.6E+02 0.0054 21.2 5.4 41 31-74 82-123 (338)
399 2vc6_A MOSA, dihydrodipicolina 23.0 2E+02 0.007 21.0 5.9 72 25-107 121-194 (292)
400 3kgk_A Arsenical resistance op 22.5 64 0.0022 20.4 2.6 57 37-95 6-74 (110)
401 2grx_C Protein TONB; beta barr 22.5 50 0.0017 23.8 2.3 16 126-141 169-185 (229)
402 1owl_A Photolyase, deoxyribodi 22.4 1.2E+02 0.0041 24.1 4.8 39 52-91 56-94 (484)
403 3e8m_A Acylneuraminate cytidyl 22.4 1.2E+02 0.0041 19.3 4.2 33 58-91 39-71 (164)
404 3vk8_A Probable formamidopyrim 22.1 24 0.00084 26.4 0.6 9 42-50 280-288 (295)
405 2hoq_A Putative HAD-hydrolase 21.9 1.5E+02 0.0052 20.0 4.8 39 52-91 96-134 (241)
406 2imf_A HCCA isomerase, 2-hydro 21.9 18 0.00062 24.8 -0.1 26 36-62 3-28 (203)
407 1xvi_A MPGP, YEDP, putative ma 21.5 1.7E+02 0.0058 20.7 5.2 38 53-91 29-66 (275)
408 3fst_A 5,10-methylenetetrahydr 21.4 1.9E+02 0.0065 21.5 5.5 41 31-78 82-122 (304)
409 3mc1_A Predicted phosphatase, 21.3 1E+02 0.0036 20.4 3.8 59 52-111 88-158 (226)
410 1veh_A NIFU-like protein hirip 20.7 17 0.00059 22.3 -0.4 35 18-56 32-66 (92)
411 3mdq_A Exopolyphosphatase; str 20.7 2.3E+02 0.008 20.9 5.9 53 57-111 64-123 (315)
412 3b33_A Sensor protein; structu 20.7 69 0.0024 18.4 2.5 13 126-138 20-33 (115)
413 1j8b_A YBAB; hypothetical prot 20.7 66 0.0023 20.3 2.4 29 126-154 46-75 (112)
414 1qyi_A ZR25, hypothetical prot 20.5 1.6E+02 0.0054 22.7 5.0 43 52-95 217-259 (384)
415 2j4d_A Cryptochrome 3, cryptoc 20.5 1.2E+02 0.0041 24.4 4.5 39 52-91 99-137 (525)
416 2zsh_A Probable gibberellin re 20.3 1.9E+02 0.0064 21.1 5.3 41 31-74 112-153 (351)
417 3pct_A Class C acid phosphatas 20.2 76 0.0026 23.2 3.0 83 5-92 55-146 (260)
418 3mfx_A Sensory BOX/ggdef famil 20.2 75 0.0026 19.8 2.7 13 126-138 20-33 (129)
419 1vjq_A Designed protein; struc 20.2 1.3E+02 0.0043 17.1 3.5 27 71-99 43-69 (79)
No 1
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=100.00 E-value=1.4e-38 Score=227.35 Aligned_cols=154 Identities=49% Similarity=0.885 Sum_probs=136.6
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEE-EecCCHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFC-IAVNDAFV 80 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~-is~d~~~~ 80 (156)
++++|+++|+|+|+.+.+|++++|+++++||++||+|||++|||+|+.+|+|.|++++++|+++|++ |++ ||.|+++.
T Consensus 14 ~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~-vv~~iS~D~~~~ 92 (173)
T 3mng_A 14 PIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQ-VVACLSVNDAFV 92 (173)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCC-EEEEEESSCHHH
T ss_pred CCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCE-EEEEEcCCCHHH
Confidence 4789999999999834899999999966999999999999999999942599999999999999999 997 99999999
Q ss_pred HHHHHHHcCCCcceEEEecCCchhHHhhCCeeecc---CCCcceeeeEEEEEeCCcEEEEEEccCCCceeecchhhhhC
Q psy5399 81 MEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIP---VLGGWRSKRYSMVVDDGKITQLNIEPDGTGLTCSLVDELKL 156 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~---~~~~~~~~~~~~iid~G~I~~~~~~~~~~~~~~~~~~~~l~ 156 (156)
+++|+++++++.+||+++|+++.++++||+..+.. ..|...+.|++||||+|+|+++++++++.+|++++++++|+
T Consensus 93 ~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~ 171 (173)
T 3mng_A 93 TGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIIS 171 (173)
T ss_dssp HHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHH
T ss_pred HHHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHH
Confidence 99999999986449999999999999999986421 12334567889999999999999999999999999999873
No 2
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=100.00 E-value=5.2e-39 Score=227.53 Aligned_cols=140 Identities=21% Similarity=0.345 Sum_probs=124.5
Q ss_pred CccCCCcCCcceecccCCCceeehhhHh-CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAI-KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~-~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
|+++|+++|+|+|+ +.+|++++|+++. +||++||+|||++|||+|+. ++|.|++++++|++.|+. +++||.|+++.
T Consensus 4 ml~vG~~aPdF~l~-~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~-e~~~l~~~~~~~~~~~v~-vv~is~d~~~~ 80 (164)
T 4gqc_A 4 LVELGEKAPDFTLP-NQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTK-ELCTFRDKMAQLEKANAE-VLAISVDSPWC 80 (164)
T ss_dssp CCCTTSBCCCCEEE-BTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECS-SCEESCCCGGGGGGSSSE-EEEEESSCHHH
T ss_pred cccCCCCCcCcEeE-CCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCccc-chhhhhhhHHHhhccCce-EEEecCCCHHH
Confidence 58999999999999 7999999999942 89999999999999999995 589999999999999999 99999999999
Q ss_pred HHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCce
Q psy5399 81 MEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGL 146 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~ 146 (156)
+++|+++++++ ||+++|++++++++||+.............|++|||| +|+|+++++.+++.++
T Consensus 81 ~~~~~~~~~~~--fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~ 145 (164)
T 4gqc_A 81 LKKFKDENRLA--FNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNE 145 (164)
T ss_dssp HHHHHHHTTCC--SEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCC
T ss_pred HHHHHHhcCcc--cceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCC
Confidence 99999999999 9999999999999999976432111123567899999 9999999998877665
No 3
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=100.00 E-value=2.1e-38 Score=222.75 Aligned_cols=140 Identities=27% Similarity=0.390 Sum_probs=121.4
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
.||++|+++|+|+|+ +.+|++++|++ ++||++||+||+++|||+|+. ++|.|+++++++++.++. +++||.|+++.
T Consensus 2 ~~l~vG~~aPdF~l~-~~~G~~~~l~d-~~Gk~vvl~f~~~~~c~~C~~-e~~~l~~~~~~~~~~~~~-~v~vs~d~~~~ 77 (157)
T 4g2e_A 2 HMVEIGELAPDFELP-DTELKKVKLSA-LKGKVVVLAFYPAAFTQVCTK-EMCTFRDSMAKFNQVNAV-VLGISVDPPFS 77 (157)
T ss_dssp CCCCTTSBCCCCEEE-BTTSCEEEGGG-GTTSCEEEEECSCTTCCC-------CCSCGGGGGGGCSSE-EEEEESSCHHH
T ss_pred CcCCCCCCCcCeEeE-CCCCCEEeHHH-HCCCeEEEEecCCCCCCcccc-chhhcccccccccccCce-EeeecccchhH
Confidence 479999999999999 79999999999 799999999999999999995 589999999999999999 99999999999
Q ss_pred HHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccC-CCcceeeeEEEEEe-CCcEEEEEEccCCCce
Q psy5399 81 MEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPV-LGGWRSKRYSMVVD-DGKITQLNIEPDGTGL 146 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~-~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~ 146 (156)
+++|+++++++ ||+++|++++++++||+...... .+.....|++|||| +|+|+++++++++.++
T Consensus 78 ~~~~~~~~~~~--~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~ 143 (157)
T 4g2e_A 78 NKAFKEHNKLN--FTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKE 143 (157)
T ss_dssp HHHHHHHTTCC--SEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCC
T ss_pred HHHHHHHcCCc--EEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCC
Confidence 99999999999 99999999999999999865422 23345678899999 9999999998776655
No 4
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.1e-37 Score=223.24 Aligned_cols=155 Identities=43% Similarity=0.718 Sum_probs=136.9
Q ss_pred CCccCCCcCCcceecccC--CC-ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC
Q psy5399 1 MCAQVGDTLPDALLHENT--PQ-TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND 77 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~--~g-~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~ 77 (156)
|++++|+++|+|+++ +. +| ++++|+++++||++||+|||++|||+|+.+|+|.|++++++|+++|+++|++||.|+
T Consensus 24 ~~l~vG~~aPdf~l~-~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~ 102 (184)
T 3uma_A 24 MTIAVGDKLPNATFK-EKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVND 102 (184)
T ss_dssp SCCCTTCBCCCCEEE-EEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSC
T ss_pred CcCCCCCCCCCcEee-cccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 568999999999999 67 89 999999966999999999999999999952599999999999999987799999999
Q ss_pred HHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCC-cceeeeEEEEEeCCcEEEEEEccCCCceeecchhhhhC
Q psy5399 78 AFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLG-GWRSKRYSMVVDDGKITQLNIEPDGTGLTCSLVDELKL 156 (156)
Q Consensus 78 ~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~-~~~~~~~~~iid~G~I~~~~~~~~~~~~~~~~~~~~l~ 156 (156)
++.+++|+++++++.+||+++|+++.++++||+..+....| +.++.|++||||+|+|+++++++++...++++++++|.
T Consensus 103 ~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~ 182 (184)
T 3uma_A 103 LHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLE 182 (184)
T ss_dssp HHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHh
Confidence 99999999999986349999999999999999987543223 23467889999999999999999888888999998873
No 5
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=100.00 E-value=2.3e-36 Score=214.57 Aligned_cols=154 Identities=49% Similarity=0.896 Sum_probs=133.7
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCC-CEEEEEecCCHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGI-HEIFCIAVNDAF 79 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~-~~v~~is~d~~~ 79 (156)
|++++|+++|+|+++.+.+|++++|+++++||++||+|||++|||+|+.+++|.|++++++|+++|+ . |++||.|+++
T Consensus 1 m~l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~-vv~Is~d~~~ 79 (167)
T 2wfc_A 1 MPIKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDI-IACMAVNDSF 79 (167)
T ss_dssp -CCCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCE-EEEEESSCHH
T ss_pred CCCCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE-EEEEeCCCHH
Confidence 8899999999999982389999999994499999999999999999995159999999999999999 8 9999999999
Q ss_pred HHHHHHHHcCCCcceEEEecCCchhHHhhCCeeec-cCCCcceeeeEEEEEeCCcEEEEEEccCCCceeecchhhhh
Q psy5399 80 VMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEI-PVLGGWRSKRYSMVVDDGKITQLNIEPDGTGLTCSLVDELK 155 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~-~~~~~~~~~~~~~iid~G~I~~~~~~~~~~~~~~~~~~~~l 155 (156)
.+++|+++++++.+||+++|+++.++++||+.... ...|...+.|++|||++|+|+++++++++.+++++.++.+|
T Consensus 80 ~~~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~~~~~~~~~~~~~~~ 156 (167)
T 2wfc_A 80 VMDAWGKAHGADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEPDGKGLTCSLAPNIL 156 (167)
T ss_dssp HHHHHHHHTTCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEEETTEEEEEEECTTSSSSSTTSHHHHH
T ss_pred HHHHHHHhcCCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEEeCCEEEEEEecCCCCcceeccHHHHH
Confidence 99999999998634999999999999999997531 01122234577898899999999999999999999999886
No 6
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=100.00 E-value=1.5e-35 Score=209.04 Aligned_cols=152 Identities=43% Similarity=0.786 Sum_probs=132.1
Q ss_pred CCccCCCcCCcceec-ccCCC--ceeehhhHhCCCeEEEEEeeCCCCCCCC-cCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 1 MCAQVGDTLPDALLH-ENTPQ--TKIQIADAIKGKKVIIFGVPGAFTPGCS-VTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 1 m~l~~G~~~P~f~l~-~~~~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~-~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
|++++|+++|+|++. .+.+| ++++|+++++||++||+||+++|||+|. .+ +|.|++++++|+++|+++|++||.|
T Consensus 2 m~~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e-~~~l~~~~~~~~~~~v~~vv~Is~d 80 (162)
T 1tp9_A 2 APIAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKH-VPGFIEKAGELKSKGVTEILCISVN 80 (162)
T ss_dssp CCCCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTH-HHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CcCCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHCCCCEEEEEECC
Confidence 568999999999985 15889 9999999569999999999999999999 75 8999999999998888659999999
Q ss_pred CHHHHHHHHHHcCC--CcceEEEecCCchhHHhhCCeeeccCCC-cceeeeEEEEEeCCcEEEEEEccCCCceeecchhh
Q psy5399 77 DAFVMEAWCRKNNA--EGKIRFLADPNLEFTKKLGVEHEIPVLG-GWRSKRYSMVVDDGKITQLNIEPDGTGLTCSLVDE 153 (156)
Q Consensus 77 ~~~~~~~~~~~~~~--~~~f~~~~D~~~~~~~~~gv~~~~~~~~-~~~~~~~~~iid~G~I~~~~~~~~~~~~~~~~~~~ 153 (156)
+++.+++|++++++ + ||+++|+++.++++||+.......| .....|++||||+|+|+++++++ +.+|..+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~-~~~~~~~~~~~ 157 (162)
T 1tp9_A 81 DPFVMKAWAKSYPENKH--VKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVDDLKVKAANIEG-GGEFTVSSAED 157 (162)
T ss_dssp CHHHHHHHHHTCTTCSS--EEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEETTEEEEEEECS-SSCCSSCSHHH
T ss_pred CHHHHHHHHHhcCCCCC--eEEEECCCchHHHHcCcccccccCCCCccceeEEEEEECCEEEEEEeeC-CCCCccCCHHH
Confidence 99999999999999 7 9999999999999999985432223 11246779999999999999988 77888888988
Q ss_pred hhC
Q psy5399 154 LKL 156 (156)
Q Consensus 154 ~l~ 156 (156)
+|+
T Consensus 158 vl~ 160 (162)
T 1tp9_A 158 ILK 160 (162)
T ss_dssp HHT
T ss_pred HHh
Confidence 874
No 7
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=100.00 E-value=2.5e-35 Score=209.80 Aligned_cols=153 Identities=44% Similarity=0.721 Sum_probs=132.5
Q ss_pred CccCCCcCCcceecccCCC-ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQ-TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g-~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
++++|+++|+|+|. +.++ ++++|+++++||++||+|||+.|||.|.. |++.|++.+++|+++|++.|++||.|++..
T Consensus 13 ~~~vGd~aPdf~l~-~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~-e~~~f~~~~~ef~~~gv~~VigIS~D~~~~ 90 (171)
T 2xhf_A 13 PIKVGDIIPDVLVY-EDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNN-HIPEYLSLYDKFKEEGYHTIACIAVNDPFV 90 (171)
T ss_dssp CCCTTCBCCCCEEE-CSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTS-SHHHHHHTHHHHHHTTCCEEEEEESSCHHH
T ss_pred cccCcCCCCCeEEe-cCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHH-HHHHHHHHHHHHHHCCCCEEEEEeCCCHHH
Confidence 57899999999999 4442 89999996699999999999999999995 699999999999999995489999999999
Q ss_pred HHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCC-cceeeeEEEEEeCCcEEEEEEccCCCceeecchhhhhC
Q psy5399 81 MEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLG-GWRSKRYSMVVDDGKITQLNIEPDGTGLTCSLVDELKL 156 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~-~~~~~~~~~iid~G~I~~~~~~~~~~~~~~~~~~~~l~ 156 (156)
+++|++++++..+||+++|+++.++++||+..+....| ...+.|++||||+|+|+++++++++.+.+++.++++|.
T Consensus 91 ~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~s~a~~vL~ 167 (171)
T 2xhf_A 91 MAAWGKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLIDDNKIRSVSTEPDITGLACLLSIQRQK 167 (171)
T ss_dssp HHHHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEETTEEEEEEETTSCSHHHHHHHHHHC-
T ss_pred HHHHHHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEeCCEEEEEEEeCCCCcccCCCHHHHHH
Confidence 99999999982129999999999999999986542111 23568889999999999999999988778888888873
No 8
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-36 Score=219.50 Aligned_cols=146 Identities=23% Similarity=0.320 Sum_probs=129.3
Q ss_pred CCccCCCcCCcceecc--cCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCH
Q psy5399 1 MCAQVGDTLPDALLHE--NTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDA 78 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~--~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~ 78 (156)
|++++|++||+|+++. +.++++++|+| ++||++||+|||++|||+|.. +++.|++.+++|++.|++ |++||.|++
T Consensus 21 M~~~VG~~APdF~l~a~~d~~~~~vsLsd-~~GK~vVL~FyP~d~TpvCt~-E~~~f~~~~~~f~~~g~~-vigiS~Ds~ 97 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAVVDGVFDEVSLDK-YKGKYVVLAFIPLAFTFVSPT-EIIAFSEAAKKFEEQGAQ-VLFASTDSE 97 (216)
T ss_dssp -CCCTTSBCCCCCEEEEETTEEEEECGGG-GTTSEEEEEECSCTTSSHHHH-HHHHHHHHHHHHHHTTEE-EEEEESSCH
T ss_pred chhhcCCcCCCCCCcceECCCCcEEehHH-hCCCeEEEEEEcCCCCCcCch-hhhHHHHhHHhhccCCce-EEEeecCch
Confidence 7789999999999863 35668999999 799999999999999999996 599999999999999999 999999999
Q ss_pred HHHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecc
Q psy5399 79 FVMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSL 150 (156)
Q Consensus 79 ~~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~ 150 (156)
..+++|++.. +++ ||+++|++++++++||+..+. .| .+.|++|||| +|+|+++.+++.+++|++++
T Consensus 98 ~sh~aw~~~~~~~~~~~~l~--fpllsD~~~~vak~YGv~~~~--~g--~~~R~tFiID~~G~Ir~~~v~~~~~grn~dE 171 (216)
T 3sbc_A 98 YSLLAWTNIPRKEGGLGPIN--IPLLADTNHSLSRDYGVLIEE--EG--VALRGLFIIDPKGVIRHITINDLPVGRNVDE 171 (216)
T ss_dssp HHHHHHHTSCGGGTCCCSCS--SCEEECTTSHHHHHHTCEETT--TT--EECEEEEEECTTSBEEEEEEECTTBCCCHHH
T ss_pred hhHHHHHHHHHHhCCccCcc--cceEeCCCCHHHHHcCCeecc--CC--ceeeEEEEECCCCeEEEEEEcCCCCCCCHHH
Confidence 9999999765 345 999999999999999998743 23 3578899999 99999999999999999887
Q ss_pred hhhhh
Q psy5399 151 VDELK 155 (156)
Q Consensus 151 ~~~~l 155 (156)
+-++|
T Consensus 172 iLr~l 176 (216)
T 3sbc_A 172 ALRLV 176 (216)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 9
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=100.00 E-value=8.2e-35 Score=207.64 Aligned_cols=151 Identities=44% Similarity=0.815 Sum_probs=131.6
Q ss_pred CccCCCcCCcceecccCCC----------ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCC-CEE
Q psy5399 2 CAQVGDTLPDALLHENTPQ----------TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGI-HEI 70 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g----------~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~-~~v 70 (156)
|+++||++|++++.. ..+ ++++|+++++||++||+|||++|||+|..+|+|.|++.+++|+++|+ + |
T Consensus 9 ~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~-V 86 (176)
T 4f82_A 9 MIQVGDALPDAQLFE-FIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDE-I 86 (176)
T ss_dssp CCCTTCBCCCCEEEE-EECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCE-E
T ss_pred hhhcCCcCCceEEEE-ecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCE-E
Confidence 689999999998873 322 78999996699999999999999999996259999999999999999 6 9
Q ss_pred EEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCC-cceeeeEEEEEeCCcEEEEEEccCCCceeec
Q psy5399 71 FCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLG-GWRSKRYSMVVDDGKITQLNIEPDGTGLTCS 149 (156)
Q Consensus 71 ~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~-~~~~~~~~~iid~G~I~~~~~~~~~~~~~~~ 149 (156)
++||.|++..+++|+++++++.+||+++|+++.++++||+..+....| +.++.|++|||++|+|+++++++ +.+++++
T Consensus 87 igIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~-~~~~~~~ 165 (176)
T 4f82_A 87 WCVSVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEA-PGKFEVS 165 (176)
T ss_dssp EEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECC-TTCCSSS
T ss_pred EEEeCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcC-CCCcchh
Confidence 999999999999999999986449999999999999999987654344 34567889999999999999987 4478888
Q ss_pred chhhhh
Q psy5399 150 LVDELK 155 (156)
Q Consensus 150 ~~~~~l 155 (156)
.++++|
T Consensus 166 ~a~~vL 171 (176)
T 4f82_A 166 DAASVL 171 (176)
T ss_dssp SHHHHH
T ss_pred hHHHHH
Confidence 998887
No 10
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=100.00 E-value=2.3e-34 Score=211.51 Aligned_cols=143 Identities=21% Similarity=0.344 Sum_probs=128.0
Q ss_pred ccCCCcCCcce----ecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCH
Q psy5399 3 AQVGDTLPDAL----LHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDA 78 (156)
Q Consensus 3 l~~G~~~P~f~----l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~ 78 (156)
+++|++||+|+ +. +.+|++++|+| ++||++||+|||++|||+|.. +++.|++++++|+++|++ |++||.|+.
T Consensus 26 ~~vG~~APdF~~~a~l~-d~~g~~vsLsd-~~GK~vVL~FyP~d~TpvCt~-E~~~f~~~~~eF~~~g~~-vigiS~Ds~ 101 (219)
T 3tue_A 26 AKINSPAPSFEEVALMP-NGSFKKISLSS-YKGKWVVLFFYPLDFTFVCPT-EVIAFSDSVSRFNELNCE-VLACSIDSE 101 (219)
T ss_dssp CCTTSBCCCCEEEEECT-TSCEEEEEGGG-GTTSEEEEEECSCTTCSSCCH-HHHHHHTTHHHHHTTTEE-EEEEESSCH
T ss_pred cccCCcCCCCccccccc-CCCCcEEehHH-hCCCEEEEEEecccCCCCCch-hHhhHHHHHhhhccCCcE-EEEeeCCch
Confidence 57999999999 55 67899999999 799999999999999999996 599999999999999999 999999999
Q ss_pred HHHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecc
Q psy5399 79 FVMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSL 150 (156)
Q Consensus 79 ~~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~ 150 (156)
..+++|+++. +++ ||+++|++++++++||+..+. .| .+.|++|||| +|+|+++++++..++|++++
T Consensus 102 ~sh~~w~~~~~~~~~~~~l~--fpllsD~~~~va~~yGv~~~~--~g--~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~E 175 (219)
T 3tue_A 102 YAHLQWTLQDRKKGGLGTMA--IPILADKTKNIARSYGVLEES--QG--VAYRGLFIIDPHGMLRQITVNDMPVGRSVEE 175 (219)
T ss_dssp HHHHHHHHSCGGGTCCCSCS--SCEEECTTSHHHHHTTCEETT--TT--EECEEEEEECTTSBEEEEEEECTTCCCCHHH
T ss_pred hhHHHHhhhhHHhcCccccc--cccccCcccHHHHHcCCcccC--CC--eeEEEEEEECCCCeEEEEEEecCCCCCCHHH
Confidence 9999999875 455 999999999999999998643 23 4578899999 99999999999999999877
Q ss_pred hhhhh
Q psy5399 151 VDELK 155 (156)
Q Consensus 151 ~~~~l 155 (156)
+-++|
T Consensus 176 vLr~l 180 (219)
T 3tue_A 176 VLRLL 180 (219)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 11
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=100.00 E-value=1.8e-33 Score=200.28 Aligned_cols=150 Identities=33% Similarity=0.583 Sum_probs=125.9
Q ss_pred CCCcCCcceecccC----CC-----ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec
Q psy5399 5 VGDTLPDALLHENT----PQ-----TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV 75 (156)
Q Consensus 5 ~G~~~P~f~l~~~~----~g-----~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~ 75 (156)
+|+++|+|+++ +. +| ++++|+++++||++||+|||++|||+|+.+|+|.|++++++|+++|+..|++||.
T Consensus 9 ~g~~aP~f~l~-~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~ 87 (171)
T 2pwj_A 9 ILSAASNVSLQ-KARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAI 87 (171)
T ss_dssp -CCCSSSBCCC-SCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEES
T ss_pred ccCcCCCeEEe-cccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 45599999999 56 57 9999999549998999999999999999533999999999999999876999999
Q ss_pred CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCC-cceeeeEEEEEeCCcEEEEEEccCCCceeecchhhh
Q psy5399 76 NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLG-GWRSKRYSMVVDDGKITQLNIEPDGTGLTCSLVDEL 154 (156)
Q Consensus 76 d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~-~~~~~~~~~iid~G~I~~~~~~~~~~~~~~~~~~~~ 154 (156)
|+++.+++|+++++++.+||+++|+++.++++||+.......+ +....|.+|+|++|+|+++++++++.+++++.++++
T Consensus 88 d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~~~~~~~~~~~~~i 167 (171)
T 2pwj_A 88 NDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVVDGKVKALNVEESPSDVKVSGAETI 167 (171)
T ss_dssp SCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEETTEEEEEEECSSTTCCSSSSHHHH
T ss_pred CCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEECCEEEEEEeecCCCCCcccCHHHH
Confidence 9999999999999962129999999999999999986432111 112345577777999999999999999999999988
Q ss_pred h
Q psy5399 155 K 155 (156)
Q Consensus 155 l 155 (156)
|
T Consensus 168 l 168 (171)
T 2pwj_A 168 L 168 (171)
T ss_dssp H
T ss_pred H
Confidence 7
No 12
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=100.00 E-value=2.5e-33 Score=201.40 Aligned_cols=150 Identities=27% Similarity=0.542 Sum_probs=125.8
Q ss_pred ccCCCcCCcceeccc--C---------CC----ceeehhhHhCCCeEEEEEeeCCCCCCCC-cCChhhHHHhHHHH-HHc
Q psy5399 3 AQVGDTLPDALLHEN--T---------PQ----TKIQIADAIKGKKVIIFGVPGAFTPGCS-VTHLPGYLAKEKDL-KAK 65 (156)
Q Consensus 3 l~~G~~~P~f~l~~~--~---------~g----~~~~l~~~~~gk~vvl~f~~~~~cp~C~-~~~l~~l~~~~~~~-~~~ 65 (156)
+++|+++|+|+|+ + . +| +.++|+++++||++||+|||++|||+|. . |++.|++.+++| ++.
T Consensus 1 l~vGd~aPdf~l~-~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~-e~~~f~~~~~~f~~~~ 78 (182)
T 1xiy_A 1 MKENDLIPNVKVM-IDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTK-MIPGYEEEYDYFIKEN 78 (182)
T ss_dssp CCTTCBCCCCEEE-EEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHT-HHHHHHHTHHHHHTTS
T ss_pred CCCCCCCCCeEEE-cccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHH-HHHHHHHHHHHHHHhC
Confidence 5789999999998 5 3 67 7999999779999999999999999999 6 599999999999 999
Q ss_pred CCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCC-cceeeeEEEEEeCCcEEEEEEccCCC
Q psy5399 66 GIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLG-GWRSKRYSMVVDDGKITQLNIEPDGT 144 (156)
Q Consensus 66 ~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~-~~~~~~~~~iid~G~I~~~~~~~~~~ 144 (156)
|++.|++||.|++..+++|++++++. +||+++|+++.++++||+..+....| +..+.|++||||+|+|+++++.+++.
T Consensus 79 g~~~V~gvS~D~~~~~~~~~~~~~~~-~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~ 157 (182)
T 1xiy_A 79 NFDDIYCITNNDIYVLKSWFKSMDIK-KIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQ 157 (182)
T ss_dssp CCSEEEEEESSCHHHHHHHHHHTTCC-SSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCC
T ss_pred CCcEEEEEeCCCHHHHHHHHHHcCCC-CceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcc
Confidence 99549999999999999999999983 29999999999999999987653334 23568889999999999999987654
Q ss_pred c------eeecchhhhh
Q psy5399 145 G------LTCSLVDELK 155 (156)
Q Consensus 145 ~------~~~~~~~~~l 155 (156)
+ -+.+.++++|
T Consensus 158 ~~~~~~~~~~~~~~~vL 174 (182)
T 1xiy_A 158 HNIQTDPYDISTVNNVK 174 (182)
T ss_dssp TTCSSCCCSTTSHHHHH
T ss_pred cccccCcccCCCHHHHH
Confidence 2 2234555554
No 13
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=100.00 E-value=5.5e-33 Score=206.80 Aligned_cols=148 Identities=22% Similarity=0.325 Sum_probs=127.1
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCC-eEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGK-KVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAF 79 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~ 79 (156)
|++.+|+++|+|++. +.+| +++|++ ++|+ ++||+||+++|||+|.. +++.|++++++|+++|++ |++||.|+.+
T Consensus 1 M~l~iG~~aPdF~l~-~~~G-~v~l~d-~~Gk~~vvL~f~pa~~cpvC~~-el~~l~~l~~ef~~~~v~-vigIS~D~~~ 75 (233)
T 2v2g_A 1 MGITLGEVFPNFEAD-STIG-KLKFHD-WLGNSWGVLFSHPRDFTPVSTT-ELGRVIQLEGDFKKRGVK-LIALSCDNVA 75 (233)
T ss_dssp -CCCTTCBCCCCEEE-ETTC-CEEHHH-HHCSSEEEEEECSCSSCHHHHH-HHHHHHHTHHHHHHTTEE-EEEEESSCHH
T ss_pred CCCCCCCCCCCcEEe-cCCC-CEEHHH-HCCCCeEEEEEECCCCCCCcHH-HHHHHHHHHHHHHHcCCE-EEEEcCCCHH
Confidence 889999999999999 7999 999999 6787 99999999999999996 699999999999999999 9999999999
Q ss_pred HHHHHHH------Hc--CCCcceEEEecCCchhHHhhCCeeecc--CCCcceeeeEEEEEe-CCcEEEEEEccCCCceee
Q psy5399 80 VMEAWCR------KN--NAEGKIRFLADPNLEFTKKLGVEHEIP--VLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTC 148 (156)
Q Consensus 80 ~~~~~~~------~~--~~~~~f~~~~D~~~~~~~~~gv~~~~~--~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~ 148 (156)
.+++|++ ++ +++ ||+++|+++.++++||+..... ..|...+.|++|||| +|+|+++.+++...+|+.
T Consensus 76 ~~~~~~~~i~~~~~~~~~~~--fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~ 153 (233)
T 2v2g_A 76 DHKEWSEDVKCLSGVKGDMP--YPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNF 153 (233)
T ss_dssp HHHHHHHHHHHHHTCCSSCS--SCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred HHHHHHHHHHHhhCcccCCc--eEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCH
Confidence 9999998 56 677 9999999999999999975321 112234578899999 999999999888888876
Q ss_pred cchhhhh
Q psy5399 149 SLVDELK 155 (156)
Q Consensus 149 ~~~~~~l 155 (156)
+++.+.|
T Consensus 154 ~eilr~l 160 (233)
T 2v2g_A 154 SEILRVI 160 (233)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6654443
No 14
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.98 E-value=4.4e-33 Score=199.34 Aligned_cols=132 Identities=16% Similarity=0.237 Sum_probs=117.9
Q ss_pred CccCCCc----CCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC
Q psy5399 2 CAQVGDT----LPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND 77 (156)
Q Consensus 2 ~l~~G~~----~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~ 77 (156)
+|++|+. +|+|++. +.+|++++|++ ++||++||+||+++|||+|+. +++.|++++++|+++++. |++||.|+
T Consensus 20 ~l~~Gd~ig~~aP~f~l~-~~~G~~v~l~d-~~Gk~vvl~f~~~~~c~~C~~-el~~l~~l~~~~~~~~~~-vv~Vs~D~ 95 (179)
T 3ixr_A 20 HMNIGDTLNHSLLNHPLM-LSGSTCKTLSD-YTNQWLVLYFYPKDNTPGSST-EGLEFNLLLPQFEQINAT-VLGVSRDS 95 (179)
T ss_dssp SSCTTCBCCHHHHHCCEE-EGGGEEECGGG-GTTSEEEEEECSCTTSHHHHH-HHHHHHHHHHHHHTTTEE-EEEEESCC
T ss_pred ccCcCcccCCcCCCeeEE-CCCCCEEeHHH-HCCCCEEEEEEcCCCCCchHH-HHHHHHHHHHHHHHCCCE-EEEEcCCC
Confidence 5889999 9999999 79999999999 799999999999999999996 599999999999999999 99999999
Q ss_pred HHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCc--ceeeeEEEEEe-CCcEEEEEE
Q psy5399 78 AFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGG--WRSKRYSMVVD-DGKITQLNI 139 (156)
Q Consensus 78 ~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~--~~~~~~~~iid-~G~I~~~~~ 139 (156)
++.+++|+++++++ ||+++|+++.++++||+.......|. ....|++|||| +|+|++++.
T Consensus 96 ~~~~~~~~~~~~~~--f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~ 158 (179)
T 3ixr_A 96 VKSHDSFCAKQGFT--FPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWR 158 (179)
T ss_dssp HHHHHHHHHHHTCC--SCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEEC
T ss_pred HHHHHHHHHHcCCc--eEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEc
Confidence 99999999999999 99999999999999999865432221 11357799999 999999983
No 15
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.98 E-value=5.9e-32 Score=201.50 Aligned_cols=142 Identities=37% Similarity=0.632 Sum_probs=122.3
Q ss_pred CCccCCCcCCcceecccC-CCc--eeehhhHhCCCeEEEEEeeCCCCCCCC-cCChhhHHHhHHHHHHcCC-CEEEEEec
Q psy5399 1 MCAQVGDTLPDALLHENT-PQT--KIQIADAIKGKKVIIFGVPGAFTPGCS-VTHLPGYLAKEKDLKAKGI-HEIFCIAV 75 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~-~g~--~~~l~~~~~gk~vvl~f~~~~~cp~C~-~~~l~~l~~~~~~~~~~~~-~~v~~is~ 75 (156)
|++++|+++|+|+++ +. +|+ +++|+++++||++||+|||++|||+|+ .+ +|.|++++++|++.|+ . |++||.
T Consensus 1 m~~~~G~~aP~f~l~-~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e-~~~l~~~~~~~~~~~~~~-vv~is~ 77 (241)
T 1nm3_A 1 MSSMEGKKVPQVTFR-TRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSH-LPRYNELAPVFKKYGVDD-ILVVSV 77 (241)
T ss_dssp --CCTTSBCCCCEEE-EEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTH-HHHHHHHHHHHHHTTCCE-EEEEES
T ss_pred CCccCCCCCCCeEEE-cccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHCCCCE-EEEEEc
Confidence 889999999999999 55 777 999999559999999999999999999 75 8999999999999999 8 999999
Q ss_pred CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCc-ceeeeEEEEEeCCcEEEEEEccCCCce
Q psy5399 76 NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGG-WRSKRYSMVVDDGKITQLNIEPDGTGL 146 (156)
Q Consensus 76 d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~-~~~~~~~~iid~G~I~~~~~~~~~~~~ 146 (156)
|+++.+++|+++++++. ||+++|+++.++++||+.......|. ....|++|||++|+|+++++++.+.+|
T Consensus 78 d~~~~~~~~~~~~~~~~-~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~ 148 (241)
T 1nm3_A 78 NDTFVMNAWKEDEKSEN-ISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGD 148 (241)
T ss_dssp SCHHHHHHHHHHTTCTT-SEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSC
T ss_pred CCHHHHHHHHHhcCCCc-eEEEECCCcHHHHHhCceeecccccCcccceeEEEEEECCEEEEEEEeccCCCc
Confidence 99999999999999843 99999999999999999865432231 124577888899999999998877653
No 16
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.98 E-value=1.9e-32 Score=192.30 Aligned_cols=131 Identities=16% Similarity=0.236 Sum_probs=117.0
Q ss_pred ccCCCcCCcce--ecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 3 AQVGDTLPDAL--LHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 3 l~~G~~~P~f~--l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
+++|+++|+|+ +. +.+|+++++++ ++||++||+||+++|||+|.. +++.|++++++|+++|+. |++||.|+++.
T Consensus 7 l~~G~~~P~f~~~l~-~~~G~~~~l~~-~~gk~~vl~F~~~~~c~~C~~-~~~~l~~~~~~~~~~~~~-vv~vs~d~~~~ 82 (163)
T 3gkn_A 7 AVLELPAATFDLPLS-LSGGTQTTLRA-HAGHWLVIYFYPKDSTPGATT-EGLDFNALLPEFDKAGAK-ILGVSRDSVKS 82 (163)
T ss_dssp CCCCCCGGGGGCCEE-CSTTCEECSGG-GTTSCEEEEECSCTTSHHHHH-HHHHHHHHHHHHHHTTCE-EEEEESSCHHH
T ss_pred cccCCcCCCcccccc-CCCCCEEEHHH-hCCCcEEEEEeCCCCCCcHHH-HHHHHHHHHHHHHHCCCE-EEEEeCCCHHH
Confidence 78999999999 99 79999999999 799999999998799999996 599999999999999999 99999999999
Q ss_pred HHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCc--ceeeeEEEEEe-CCcEEEEEE
Q psy5399 81 MEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGG--WRSKRYSMVVD-DGKITQLNI 139 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~--~~~~~~~~iid-~G~I~~~~~ 139 (156)
+++|+++++++ ||+++|+++.++++||+.......|. ....|++|||| +|+|++++.
T Consensus 83 ~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~ 142 (163)
T 3gkn_A 83 HDNFCAKQGFA--FPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWR 142 (163)
T ss_dssp HHHHHHHHCCS--SCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEEC
T ss_pred HHHHHHHhCCC--ceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEc
Confidence 99999999999 99999999999999999864322221 11267799999 999999983
No 17
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.98 E-value=4.7e-32 Score=200.30 Aligned_cols=141 Identities=17% Similarity=0.225 Sum_probs=120.7
Q ss_pred CC-ccCCCcCCcceecccC--CC--ceeehhhHh-CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEe
Q psy5399 1 MC-AQVGDTLPDALLHENT--PQ--TKIQIADAI-KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 1 m~-l~~G~~~P~f~l~~~~--~g--~~~~l~~~~-~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is 74 (156)
|+ +++|+++|+|++. +. +| ++++|++ + +||++||+||+++|||+|+. ++|.|++++++|++++++ |++||
T Consensus 22 M~~l~~G~~aP~F~l~-~~~~~G~~~~v~L~d-~~~Gk~vvl~F~patwCp~C~~-e~p~l~~l~~~~~~~~v~-vv~Is 97 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQ-GLNKNNEIINVDLSS-FIGQKYCCLLFYPLNYTFVCPT-EIIEFNKHIKDFENKNVE-LLGIS 97 (221)
T ss_dssp ----CTTSBCCCCEEE-EECTTSCEEEEEGGG-GTTTCEEEEEECCCCTTTCCHH-HHHHHHHTHHHHHHTTEE-EEEEE
T ss_pred cccCCCCCCCCCeEEe-ccccCCCccEEeHHH-HcCCCeEEEEEEcCCCCCchHH-HHHHHHHHHHHHHHCCCE-EEEEe
Confidence 44 7899999999999 67 89 9999999 7 99999999999999999996 599999999999999999 99999
Q ss_pred cCCHHHHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCce
Q psy5399 75 VNDAFVMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGL 146 (156)
Q Consensus 75 ~d~~~~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~ 146 (156)
.|+++.+++|++++ +++ ||+++|+++.++++||+. .. .| ...|++|||| +|+|++.++++...++
T Consensus 98 ~D~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~~~~~ygv~-~~--~g--~~~P~~~lID~~G~I~~~~~g~~~~~~ 170 (221)
T 2c0d_A 98 VDSVYSHLAWKNMPIEKGGIGNVE--FTLVSDINKDISKNYNVL-YD--NS--FALRGLFIIDKNGCVRHQTVNDLPIGR 170 (221)
T ss_dssp SSCHHHHHHHHHSCGGGTCCCSCS--SEEEECTTSHHHHHTTCE-ET--TT--EECEEEEEECTTSBEEEEEEECTTCCC
T ss_pred CCCHHHHHHHHHHhhhhcCccCCc--eEEEECCchHHHHHcCCc-cc--CC--CccceEEEECCCCeEEEEEecCCCCCC
Confidence 99999999999998 667 999999999999999996 32 12 2467799999 9999999988665555
Q ss_pred eecchh
Q psy5399 147 TCSLVD 152 (156)
Q Consensus 147 ~~~~~~ 152 (156)
+.+++.
T Consensus 171 ~~~ell 176 (221)
T 2c0d_A 171 NVQEVL 176 (221)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 544443
No 18
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.98 E-value=2e-32 Score=202.19 Aligned_cols=148 Identities=20% Similarity=0.291 Sum_probs=126.6
Q ss_pred CCccCCCcCCcceecccC--CCceeehhhHhCCC-eEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC
Q psy5399 1 MCAQVGDTLPDALLHENT--PQTKIQIADAIKGK-KVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND 77 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~--~g~~~~l~~~~~gk-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~ 77 (156)
|++++|+++|+|++. +. +| +++|++ ++|+ ++||+|||++|||+|.. +++.|++++++|+++|++ |++||.|+
T Consensus 1 m~l~iG~~aP~F~l~-~~~~~G-~v~l~d-~~Gk~~vvL~f~~a~~cp~C~~-el~~l~~l~~~f~~~~v~-vi~vS~D~ 75 (220)
T 1xcc_A 1 MGYHLGATFPNFTAK-ASGIDG-DFELYK-YIENSWAILFSHPNDFTPVCTT-ELAELGKMHEDFLKLNCK-LIGFSCNS 75 (220)
T ss_dssp -CCCTTCBCCCCEEC-BTTCSS-CEEHHH-HTTTSEEEEECCSCTTCHHHHH-HHHHHHHTHHHHHTTTEE-EEEEESSC
T ss_pred CCCCCCCCCCCcEee-cccCCC-cEeHHH-HcCCCeEEEEEECCCCCCCCHH-HHHHHHHHHHHHHHcCCE-EEEEeCCC
Confidence 889999999999999 68 88 999999 6887 89999999999999995 699999999999999999 99999999
Q ss_pred HHHHHHHHH-------HcCCCcceEEEecCCchhHHhhCCeeecc--CCCcceeeeEEEEEe-CCcEEEEEEccCCCcee
Q psy5399 78 AFVMEAWCR-------KNNAEGKIRFLADPNLEFTKKLGVEHEIP--VLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLT 147 (156)
Q Consensus 78 ~~~~~~~~~-------~~~~~~~f~~~~D~~~~~~~~~gv~~~~~--~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~ 147 (156)
.+.+++|.+ +++++ ||+++|+++.++++||+..... ..|...+.|++|||| +|+|+++.+++...+|+
T Consensus 76 ~~~~~~~~~~i~~~~~~~~~~--fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~ 153 (220)
T 1xcc_A 76 KESHDKWIEDIKYYGKLNKWE--IPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRN 153 (220)
T ss_dssp HHHHHHHHHHHHHHHTCSCCC--CCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCC
T ss_pred HHHHHHHHHHHHHHhcCCCCc--ceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCC
Confidence 999999987 46777 9999999999999999975421 112234578899999 99999999988888887
Q ss_pred ecchhhhh
Q psy5399 148 CSLVDELK 155 (156)
Q Consensus 148 ~~~~~~~l 155 (156)
.+++.+.|
T Consensus 154 ~~ell~~i 161 (220)
T 1xcc_A 154 AHEILRVL 161 (220)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665543
No 19
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.98 E-value=3.1e-32 Score=191.36 Aligned_cols=137 Identities=18% Similarity=0.239 Sum_probs=120.1
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCe-EEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKK-VIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~-vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
|+++|+++|+|++. +.+|+++++++ ++||+ +||+||+++|||+|.. ++|.|.+++++|+++|+. |++||.|+++.
T Consensus 1 ml~~G~~~P~f~l~-~~~G~~~~l~~-~~gk~~vvl~F~~a~~C~~C~~-~~~~l~~~~~~~~~~~v~-vv~vs~d~~~~ 76 (161)
T 3drn_A 1 MVKVGDKAPLFEGI-ADNGEKISLSD-YIGKHNIVLYFYPKDDTPGSTR-EASAFRDNWDLLKDYDVV-VIGVSSDDINS 76 (161)
T ss_dssp -CCTTSBCCCCEEE-ETTSCEEEGGG-TTTTSEEEEEECSCTTCHHHHH-HHHHHHHTHHHHHTTCEE-EEEEESCCHHH
T ss_pred CCCCCCcCCCeEee-cCCCCEEEHHH-hcCCCCEEEEEEcCCCCCchHH-HHHHHHHHHHHHHHcCCE-EEEEeCCCHHH
Confidence 68999999999999 79999999999 79998 9999999999999996 599999999999998998 99999999999
Q ss_pred HHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecc
Q psy5399 81 MEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSL 150 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~ 150 (156)
+++|+++++++ |++++|.+..++++||+.. .....|++|||| +|+|++.+.++.......++
T Consensus 77 ~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~------~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~ 139 (161)
T 3drn_A 77 HKRFKEKYKLP--FILVSDPDKKIRELYGAKG------FILPARITFVIDKKGIIRHIYNSQMNPANHVNE 139 (161)
T ss_dssp HHHHHHHTTCC--SEEEECTTSHHHHHTTCCC------SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHH
T ss_pred HHHHHHHhCCC--ceEEECCcHHHHHHcCCCC------cCcccceEEEECCCCEEEEEEecCCCCCcCHHH
Confidence 99999999999 9999999999999999962 122356699999 99999999885444444333
No 20
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.98 E-value=8.8e-32 Score=189.96 Aligned_cols=133 Identities=17% Similarity=0.332 Sum_probs=116.4
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
+.+++|+++|+|++. +.+|++++|++ ++||++||+||+++|||+|.. ++|.|++++++| .+++ |++||.|+++.
T Consensus 15 ~~~~~G~~~P~f~l~-~~~G~~v~l~~-~~gk~vvl~f~~~~~c~~C~~-e~~~l~~~~~~~--~~v~-vv~Is~d~~~~ 88 (165)
T 1q98_A 15 HFPQVGEIVENFILV-GNDLADVALND-FASKRKVLNIFPSIDTGVCAT-SVRKFNQQAAKL--SNTI-VLCISADLPFA 88 (165)
T ss_dssp CCCCTTCBCCCCEEE-CTTSCEEEGGG-GTTSEEEEEECSCSCSSCCCH-HHHHHHHHHHHS--TTEE-EEEEESSCHHH
T ss_pred ccCCCCCCCCCeEEE-CCCCCEEehHH-hCCCeEEEEEECCCCCCccHH-HHHHHHHHHHHc--CCCE-EEEEeCCCHHH
Confidence 457899999999999 79999999999 799999999999999999996 699999999999 6888 99999999999
Q ss_pred HHHHHHHcCC-CcceEEEecC-CchhHHhhCCeeecc-CCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 81 MEAWCRKNNA-EGKIRFLADP-NLEFTKKLGVEHEIP-VLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 81 ~~~~~~~~~~-~~~f~~~~D~-~~~~~~~~gv~~~~~-~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
+++|++++++ + ||+++|+ ++.++++||+..... ..| ...|++|||| +|+|++.+++++.
T Consensus 89 ~~~~~~~~~~~~--~~~l~D~~~~~~~~~~gv~~~~~~~~g--~~~p~~~liD~~G~i~~~~~~~~~ 151 (165)
T 1q98_A 89 QARFCGAEGIEN--AKTVSTFRNHALHSQLGVDIQTGPLAG--LTSRAVIVLDEQNNVLHSQLVEEI 151 (165)
T ss_dssp HTTCTTTTTCTT--EEEEECTTCTHHHHHTTCEECSSTTTT--SBCCEEEEECTTSBEEEEEECSBT
T ss_pred HHHHHHHcCCCc--eEEeeccccchHHHHhCceecccccCC--ccceeEEEEcCCCEEEEEEeCCCC
Confidence 9999999999 7 9999998 799999999975321 112 1357799999 9999999986443
No 21
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.97 E-value=1.3e-31 Score=195.09 Aligned_cols=131 Identities=18% Similarity=0.314 Sum_probs=116.7
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVM 81 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~ 81 (156)
++++|+++|+|++. +.+|++++|++ ++||++||+||+++|||+|.. +++.|++++++| .+++ |++||.|+++.+
T Consensus 51 ~l~~G~~aPdf~l~-d~~G~~v~L~d-~~Gk~vvl~F~~~~~c~~C~~-e~~~l~~l~~~~--~~v~-vv~Is~D~~~~~ 124 (200)
T 3zrd_A 51 LPQIGDKAKDFTLV-AKDLSDVALSS-FAGKRKVLNIFPSIDTGVCAA-SVRKFNQLAGEL--ENTV-VLCISSDLPFAQ 124 (200)
T ss_dssp CCCTTCBCCCCEEE-CTTSCEEEGGG-GTTSEEEEEECSCCCCSCCCH-HHHHHHHHHHTS--TTEE-EEEEESSCHHHH
T ss_pred cCCCCCCCCCeEEE-CCCCCEEcHHH-hCCCcEEEEEECCCCCchhHH-HHHHHHHHHHHh--CCCE-EEEEECCCHHHH
Confidence 57899999999999 79999999999 799999999999999999996 599999999999 6888 999999999999
Q ss_pred HHHHHHcCC-CcceEEEecC-CchhHHhhCCeeeccC-CCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 82 EAWCRKNNA-EGKIRFLADP-NLEFTKKLGVEHEIPV-LGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 82 ~~~~~~~~~-~~~f~~~~D~-~~~~~~~~gv~~~~~~-~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
++|++++++ + ||+++|+ ++.++++||+...... .|. ..|++|||| +|+|+++++.++
T Consensus 125 ~~~~~~~~~~~--f~~l~D~~~~~~~~~ygv~~~~~~~~g~--~~p~~~lID~~G~I~~~~~~~~ 185 (200)
T 3zrd_A 125 SRFCGAEGLSN--VITLSTLRGADFKQAYGVAITEGPLAGL--TARAVVVLDGQDNVIYSELVNE 185 (200)
T ss_dssp TTCTTTTTCTT--EEEEETTSCTHHHHHTTCEECSSTTTTS--BCCEEEEECTTSBEEEEEECSB
T ss_pred HHHHHHcCCCC--ceEEecCchHHHHHHhCceeecccCCCc--cccEEEEECCCCeEEEEEecCC
Confidence 999999999 8 9999999 8999999999754311 121 357799999 999999998653
No 22
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.97 E-value=1.7e-31 Score=201.05 Aligned_cols=145 Identities=19% Similarity=0.310 Sum_probs=126.7
Q ss_pred CccCCCcCCcceecc--cCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHH
Q psy5399 2 CAQVGDTLPDALLHE--NTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAF 79 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~--~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~ 79 (156)
++++|+++|+|++++ +.+|++++|++ ++||++||+||+++|||+|.. +++.|++++++|+++|+. |++||.|+++
T Consensus 61 ~l~vG~~aPdF~l~~l~d~~G~~vsLsd-~kGK~vvL~F~~a~~cp~C~~-el~~l~~l~~~~~~~gv~-vv~IS~D~~~ 137 (254)
T 3tjj_A 61 KAKISKPAPYWEGTAVIDGEFKELKLTD-YRGKYLVFFFYPLDFTFVCPT-EIIAFGDRLEEFRSINTE-VVACSVDSQF 137 (254)
T ss_dssp CCCTTSBCCCCEEEEEETTEEEEEEGGG-GTTSEEEEEECSCTTCSSCCH-HHHHHHHTHHHHHTTTEE-EEEEESSCHH
T ss_pred ccCCCCCCCCcEeeeecCCCCcEEeHHH-HCCCeEEEEEECCCCCCchHH-HHHHHHHHHHHHHHcCCE-EEEEcCCCHH
Confidence 578999999999873 34678999999 799999999999999999996 699999999999999999 9999999999
Q ss_pred HHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecch
Q psy5399 80 VMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLV 151 (156)
Q Consensus 80 ~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~ 151 (156)
.+++|++++ +++ ||+++|+++.++++||+..... | ...|++|||| +|+|+++++++...+++.+++
T Consensus 138 ~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~va~~ygv~~~~~--g--~~~p~tflID~~G~I~~~~~~~~~~~~~~~ei 211 (254)
T 3tjj_A 138 THLAWINTPRRQGGLGPIR--IPLLSDLTHQISKDYGVYLEDS--G--HTLRGLFIIDDKGILRQITLNDLPVGRSVDET 211 (254)
T ss_dssp HHHHHHTSCGGGTSCCSCS--SCEEECTTSHHHHHHTCEETTT--T--EECEEEEEECTTSBEEEEEEECTTCCCCHHHH
T ss_pred HHHHHHHHHHHhcCCcccc--cceeeCcHHHHHHHcCCccccC--C--CccceEEEECCCCeEEEEEecCCCCCCCHHHH
Confidence 999999987 677 9999999999999999975321 2 3467799999 999999999888888877666
Q ss_pred hhhh
Q psy5399 152 DELK 155 (156)
Q Consensus 152 ~~~l 155 (156)
.++|
T Consensus 212 l~~L 215 (254)
T 3tjj_A 212 LRLV 215 (254)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 23
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.97 E-value=7.4e-32 Score=201.51 Aligned_cols=146 Identities=21% Similarity=0.321 Sum_probs=125.6
Q ss_pred CCccCCCcCCcceecc--cCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCH
Q psy5399 1 MCAQVGDTLPDALLHE--NTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDA 78 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~--~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~ 78 (156)
+++.+|+++|+|++++ +.+|++++|++ ++||++||+||+++|||+|.. ++|.|++++++|+++|+. |++||.|++
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd-~~Gk~vvL~F~~~~~cp~C~~-el~~l~~l~~~~~~~gv~-vv~Is~D~~ 122 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSD-YRGKYLVFFFYPLDFTFVCPT-EIIAFSDRVHEFRAINTE-VVACSVDSQ 122 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGG-GTTSEEEEEECSCTTSSHHHH-HHHHHHHHHHHHHTTTEE-EEEEESSCH
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHH-hCCCEEEEEEECCCCCCchHH-HHHHHHHHHHHHHHCCCE-EEEEECCCH
Confidence 4578999999999873 23467999999 799999999998899999996 599999999999999999 999999999
Q ss_pred HHHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecc
Q psy5399 79 FVMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSL 150 (156)
Q Consensus 79 ~~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~ 150 (156)
+.+++|++++ +++ ||+++|+++.++++||+..... | ...|++|||| +|+|+++++++...+++.++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~--fp~l~D~~~~v~~~ygv~~~~~--g--~~~p~~flID~~G~I~~~~~~~~~~~~~~~e 196 (240)
T 3qpm_A 123 FTHLAWIITPRKQGGLGPMK--IPLLSDLTHQISKDYGVYLEDQ--G--HTLRGLFIIDEKGVLRQITMNDLPVGRSVDE 196 (240)
T ss_dssp HHHHHHHHSCGGGTCCCSCS--SCEEECTTSHHHHHTTCEETTT--T--EECEEEEEECTTSBEEEEEEECTTBCCCHHH
T ss_pred HHHHHHHHHHHhhcCCCCCc--eeEEeCchHHHHHHhCCccccC--C--CccceEEEEcCCCeEEEEEecCCCCCCCHHH
Confidence 9999999987 677 9999999999999999975331 2 2467799999 99999999988887777666
Q ss_pred hhhhh
Q psy5399 151 VDELK 155 (156)
Q Consensus 151 ~~~~l 155 (156)
+.++|
T Consensus 197 il~~l 201 (240)
T 3qpm_A 197 TLRLV 201 (240)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 24
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.97 E-value=1e-31 Score=189.72 Aligned_cols=130 Identities=25% Similarity=0.382 Sum_probs=115.9
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
+++++|+++|+|++. +.+|++++|++ ++||+++|+||+++|||+|.. ++|.|++++++ .++. |++||.|+++.
T Consensus 18 ~~l~~G~~aP~f~l~-~~~G~~~~l~~-~~Gk~vvl~f~~~~~c~~C~~-~~~~l~~~~~~---~~~~-vv~is~d~~~~ 90 (166)
T 3p7x_A 18 QQINEGDFAPDFTVL-DNDLNQVTLAD-YAGKKKLISVVPSIDTGVCDQ-QTRKFNSDASK---EEGI-VLTISADLPFA 90 (166)
T ss_dssp CCCCTTSBCCCCEEE-CTTSCEEEGGG-GTTSCEEEEECSCTTSHHHHH-HHHHHHHHSCT---TTSE-EEEEESSCHHH
T ss_pred ccCCCCCCCCCeEEE-cCCCCEEeHHH-hCCCcEEEEEECCCCCCccHH-HHHHHHHHhhc---CCCE-EEEEECCCHHH
Confidence 458899999999999 79999999999 799999999999999999996 58999999988 6888 99999999999
Q ss_pred HHHHHHHcCC-CcceEEEecC-CchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 81 MEAWCRKNNA-EGKIRFLADP-NLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 81 ~~~~~~~~~~-~~~f~~~~D~-~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
+++|++++++ + ||+++|+ ++.++++||+.... .| ...|++|||| +|+|+++++.++.
T Consensus 91 ~~~~~~~~~~~~--~~~l~D~~~~~~~~~~gv~~~~--~g--~~~p~~~liD~~G~i~~~~~~~~~ 150 (166)
T 3p7x_A 91 QKRWCASAGLDN--VITLSDHRDLSFGENYGVVMEE--LR--LLARAVFVLDADNKVVYKEIVSEG 150 (166)
T ss_dssp HHHHHHHHTCSS--CEEEECTTTCHHHHHHTCEETT--TT--EECCEEEEECTTCBEEEEEECSBT
T ss_pred HHHHHHHcCCCc--eEEccCCchhHHHHHhCCcccc--CC--ceeeEEEEECCCCeEEEEEEcCCc
Confidence 9999999999 7 9999999 89999999997532 12 2367799999 9999999886644
No 25
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.97 E-value=1.7e-31 Score=192.21 Aligned_cols=140 Identities=19% Similarity=0.328 Sum_probs=121.1
Q ss_pred cCCCcCCcceecccC-CC--ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 4 QVGDTLPDALLHENT-PQ--TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~-~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
++|+++|+|++. +. +| ++++|++ ++||++||+||+++|||+|+. ++|.|++++++|++.+++ |++||.|+++.
T Consensus 2 ~~G~~aP~f~l~-~~~~G~~~~v~l~~-~~Gk~vvl~F~~~~~Cp~C~~-e~~~l~~~~~~~~~~~v~-vv~Is~d~~~~ 77 (186)
T 1n8j_A 2 LINTKIKPFKNQ-AFKNGEFIEVTEKD-TEGRWSVFFFYPADFTFVSPT-ELGDVADHYEELQKLGVD-VYSVSTDTHFT 77 (186)
T ss_dssp CTTCBCCCCEEE-EEETTEEEEEEHHH-HTTSEEEEEECSCTTCSHHHH-HHHHHHHHHHHHHHTTEE-EEEEESSCHHH
T ss_pred CCCCcCCCcEee-cccCCcceEEEHHH-HCCCeEEEEEECCCCCCccHH-HHHHHHHHHHHHHHCCCE-EEEEECCCHHH
Confidence 689999999999 67 58 8999999 699999999998899999995 699999999999999998 99999999999
Q ss_pred HHHHHHHc----CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecchhh
Q psy5399 81 MEAWCRKN----NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLVDE 153 (156)
Q Consensus 81 ~~~~~~~~----~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~~~ 153 (156)
+++|++++ +++ ||+++|+++.++++||+.... .| ...|++|||| +|+|++.+.++.+.+++.+++.+
T Consensus 78 ~~~~~~~~~~~~~~~--fp~l~D~~~~~~~~ygv~~~~--~g--~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~ 149 (186)
T 1n8j_A 78 HKAWHSSSETIAKIK--YAMIGDPTGALTRNFDNMRED--EG--LADRATFVVDPQGIIQAIEVTAEGIGRDASDLLR 149 (186)
T ss_dssp HHHHHHHCTTGGGCC--SEEEECTTSHHHHHTTCEETT--TT--EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHH
T ss_pred HHHHHHHcCcccCCc--eeEEECCchHHHHHhCCccCC--CC--ceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHH
Confidence 99999999 788 999999999999999997532 12 2367799999 99999999887655555444433
No 26
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.97 E-value=2.1e-31 Score=195.68 Aligned_cols=142 Identities=16% Similarity=0.247 Sum_probs=124.6
Q ss_pred CccCCCcCCcceecccC--CC--ceeehhhHh-CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 2 CAQVGDTLPDALLHENT--PQ--TKIQIADAI-KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~--~g--~~~~l~~~~-~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
++.+|+++|+|++. +. +| ++++|++ + +||++||+||+++|||+|.. +++.|.+++++|++.+++ |++||.|
T Consensus 20 ~l~~G~~aP~f~l~-~~~~~G~~~~v~l~d-~~~gk~vvl~F~pa~~C~~C~~-~~~~l~~l~~~~~~~~v~-vv~Is~D 95 (213)
T 2i81_A 20 PTYVGKEAPFFKAE-AVFGDNSFGEVNLTQ-FIGKKYVLLYFYPLDFTFVCPS-EIIALDKALDAFHERNVE-LLGCSVD 95 (213)
T ss_dssp CCCBTSBCCCCEEE-EECTTSCEEEEEGGG-GTTTCEEEEEECSCTTSSHHHH-HHHHHHHTHHHHHHTTEE-EEEEESS
T ss_pred cccCCCcCCCeEee-ccccCCceeEEeHHH-HcCCCeEEEEEEcCCCCCCCHH-HHHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 57899999999999 67 89 8999999 6 99999999999999999996 599999999999999999 9999999
Q ss_pred CHHHHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceee
Q psy5399 77 DAFVMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTC 148 (156)
Q Consensus 77 ~~~~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~ 148 (156)
+++.+++|++++ +++ ||+++|+++.++++||+..+ .| ...|++|||| +|+|++..+++.+.+++.
T Consensus 96 ~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~~~~~ygv~~~---~g--~~~p~~~lID~~G~i~~~~~~~~~~~~~~ 168 (213)
T 2i81_A 96 SKYTHLAWKKTPLAKGGIGNIK--HTLLSDITKSISKDYNVLFD---DS--VSLRAFVLIDMNGIVQHLLVNNLAIGRSV 168 (213)
T ss_dssp CHHHHHHHHSSCGGGTCCCSCS--SEEEECTTSHHHHHTTCEET---TT--EECEEEEEECTTSBEEEEEEECTTCCCCH
T ss_pred CHHHHHHHHHHHHhhCCccCCC--ceEEECCchHHHHHhCCccc---cC--CcccEEEEECCCCEEEEEEecCCCCCCCH
Confidence 999999999988 677 99999999999999999751 12 2467799999 999999998877766766
Q ss_pred cchhhh
Q psy5399 149 SLVDEL 154 (156)
Q Consensus 149 ~~~~~~ 154 (156)
+++.+.
T Consensus 169 ~ell~~ 174 (213)
T 2i81_A 169 DEILRI 174 (213)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 27
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=196.66 Aligned_cols=143 Identities=18% Similarity=0.267 Sum_probs=121.4
Q ss_pred CccCCCcCCcceecc--cCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHH
Q psy5399 2 CAQVGDTLPDALLHE--NTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAF 79 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~--~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~ 79 (156)
++.+|+++|+|++.+ +.+|++++|++ ++||++||+|||++|||+|.. ++|.|++++++|++++++ |++||.|+++
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l~d-~~Gk~vvl~F~pat~C~~C~~-e~~~l~~l~~~~~~~~v~-vv~Is~D~~~ 94 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKLTD-YRGKYLVFFFYPLDFTFVCPT-EIIAFGDRLEEFRSINTE-VVACSVDSQF 94 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEGGG-GTTSEEEEEECSCTTSSHHHH-HHHHHHHTHHHHHTTTEE-EEEEESSCHH
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEHHH-hCCCeEEEEEECCCCCCCCHH-HHHHHHHHHHHHHHCCCE-EEEEECCCHH
Confidence 478999999999993 13568999999 799999999999999999996 599999999999988999 9999999999
Q ss_pred HHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecch
Q psy5399 80 VMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLV 151 (156)
Q Consensus 80 ~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~ 151 (156)
.+++|++++ +++ ||+++|+++.++++||+.... .| ...|++|||| +|+|+++++++...+++.+++
T Consensus 95 ~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~~~~~ygv~~~~--~g--~~~p~~~lID~~G~I~~~~~g~~~~~~~~~el 168 (211)
T 2pn8_A 95 THLAWINTPRRQGGLGPIR--IPLLSDLTHQISKDYGVYLED--SG--HTLRGLFIIDDKGILRQITLNDLPVGRSVDET 168 (211)
T ss_dssp HHHHHHTSCGGGTCCCSCS--SCEEECTTSHHHHHTTCEETT--TT--EECEEEEEECTTSBEEEEEEECTTBCCCHHHH
T ss_pred HHHHHHHHhhhccCccCCc--eEEEECCchHHHHHcCCcccC--CC--cccceEEEECCCCEEEEEEecCCCCCCCHHHH
Confidence 999999988 667 999999999999999996432 12 2467799999 999999998876666655444
Q ss_pred hh
Q psy5399 152 DE 153 (156)
Q Consensus 152 ~~ 153 (156)
.+
T Consensus 169 l~ 170 (211)
T 2pn8_A 169 LR 170 (211)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 28
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.97 E-value=8.8e-31 Score=193.27 Aligned_cols=131 Identities=13% Similarity=0.162 Sum_probs=114.6
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCC-----cCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCS-----VTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~-----~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
++++|+++|+|+|+ +.+|++++|++ ++||++||+||++.|||+|. .+ ++.|.++ | .|+. |++||.|
T Consensus 21 ~l~vG~~APdFtL~-d~~G~~vsLsd-~~Gk~vVL~F~ps~~cp~C~~~~~~~E-l~~~~~~---~--~gv~-VvgIS~D 91 (224)
T 3keb_A 21 FPRKGDYLPSFMLV-DDQKHDAALES-FSHTPKLIVTLLSVDEDEHAGLLLLRE-TRRFLDS---W--PHLK-LIVITVD 91 (224)
T ss_dssp CCCTTCBCCCCEEE-ETTSCEEEGGG-GTTCCEEEEECSCTTCSTTTSHHHHHH-HHHHHTT---C--TTSE-EEEEESS
T ss_pred cCCCCCCCCCeEEE-CCCCCEEeHHH-hCCCcEEEEEEeCCCCCCCCCCccHHH-HHHHHHH---c--CCCE-EEEEECC
Confidence 57899999999999 79999999999 79999999999998899999 74 7888887 4 6888 9999999
Q ss_pred CHHHHHHHHHHcCC-CcceEEEecC-CchhHHhhCCeeeccC-CCcceeeeEEEEEe-CCcEEEEEEccCCCc
Q psy5399 77 DAFVMEAWCRKNNA-EGKIRFLADP-NLEFTKKLGVEHEIPV-LGGWRSKRYSMVVD-DGKITQLNIEPDGTG 145 (156)
Q Consensus 77 ~~~~~~~~~~~~~~-~~~f~~~~D~-~~~~~~~~gv~~~~~~-~~~~~~~~~~~iid-~G~I~~~~~~~~~~~ 145 (156)
+++.+++|++++++ + ||+++|+ ++.++++||+...... .| ...|++|||| +|+|+|+++.++..+
T Consensus 92 s~~~~~~f~~~~gl~~--fplLsD~~~~~vak~yGv~~~~~~~~G--~~~p~tfvID~dG~I~~~~~~~~~~~ 160 (224)
T 3keb_A 92 SPSSLARARHEHGLPN--IALLSTLRGRDFHKRYGVLITEYPLSG--YTSPAIILADAANVVHYSERLANTRD 160 (224)
T ss_dssp CHHHHHHHHHHHCCTT--CEEEESTTCTTHHHHTTCBCCSTTSTT--CBCCEEEEECTTCBEEEEEECSBTTC
T ss_pred CHHHHHHHHHHcCCCC--ceEEEcCCchHHHHHhCCccccccccC--CccCEEEEEcCCCEEEEEEecCCCCC
Confidence 99999999999999 6 9999998 6999999999864311 23 2467899999 999999999876554
No 29
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.97 E-value=1.6e-31 Score=197.78 Aligned_cols=145 Identities=21% Similarity=0.314 Sum_probs=124.6
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCC-eEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHH
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGK-KVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVM 81 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~ 81 (156)
+.+|+++|+|++. +.+| +++|++ ++|+ ++||+|||++|||+|.. +++.|++++++|+++|++ |++||.|+.+.+
T Consensus 5 l~~G~~aP~F~l~-~~~G-~v~l~d-~~Gk~~vvL~~~~a~~cp~C~~-el~~l~~l~~~f~~~~v~-vi~IS~D~~~~~ 79 (224)
T 1prx_A 5 LLLGDVAPNFEAN-TTVG-RIRFHD-FLGDSWGILFSHPRDFTPVCTT-ELGRAAKLAPEFAKRNVK-LIALSIDSVEDH 79 (224)
T ss_dssp CCTTCBCCCCEEE-ETTE-EEEHHH-HHTTSEEEEEEESCSSCHHHHH-HHHHHHHHHHHHHTTTEE-EEEEESSCHHHH
T ss_pred CCCcCCCCCcEEe-cCCC-CEEHHH-HcCCCeEEEEEECCCCCCCcHH-HHHHHHHHHHHHHHCCCE-EEEEcCCCHHHH
Confidence 6899999999999 7899 999999 6776 89999999999999996 699999999999999999 999999999999
Q ss_pred HHHHHH----------cCCCcceEEEecCCchhHHhhCCeeecc--CCCcceeeeEEEEEe-CCcEEEEEEccCCCceee
Q psy5399 82 EAWCRK----------NNAEGKIRFLADPNLEFTKKLGVEHEIP--VLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTC 148 (156)
Q Consensus 82 ~~~~~~----------~~~~~~f~~~~D~~~~~~~~~gv~~~~~--~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~ 148 (156)
++|+++ ++++ ||+++|+++.++++||+..... ..|...+.|++|||| +|+|+++++++...+|+.
T Consensus 80 ~~~~~~i~~~~~~~~~~~~~--fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~ 157 (224)
T 1prx_A 80 LAWSKDINAYNSEEPTEKLP--FPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNF 157 (224)
T ss_dssp HHHHHHHHHHTTSCCCSCCS--SCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCH
T ss_pred HHHHHHHHHhhCcccccCcC--cceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCH
Confidence 999987 7787 9999999999999999975321 112123467899999 999999999988888876
Q ss_pred cchhhh
Q psy5399 149 SLVDEL 154 (156)
Q Consensus 149 ~~~~~~ 154 (156)
+++.+.
T Consensus 158 ~eil~~ 163 (224)
T 1prx_A 158 DEILRV 163 (224)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 30
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.97 E-value=5.2e-31 Score=191.65 Aligned_cols=144 Identities=21% Similarity=0.281 Sum_probs=124.8
Q ss_pred CCccCCCcCCcceecccC--CC--ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 1 MCAQVGDTLPDALLHENT--PQ--TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~--~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
+++.+|+++|+|++. +. +| ++++|++ ++||++||+||+++|||+|.. +++.|.+++++|++.++. |++||.|
T Consensus 4 ~~~~~G~~aP~f~l~-~~~~~g~~~~v~l~~-~~gk~vvl~F~~~~~C~~C~~-~~~~l~~l~~~~~~~~v~-vi~Is~D 79 (202)
T 1uul_A 4 GEAEDLHPAPDFNET-ALMPNGTFKKVALTS-YKGKWLVLFFYPMDFTFVCPT-EICQFSDRVKEFSDIGCE-VLACSMD 79 (202)
T ss_dssp CCCCTTSBCCCCEEE-EECTTSCEEEEEGGG-GTTSEEEEEECSCTTCSHHHH-HHHHHHHTHHHHHTTTEE-EEEEESS
T ss_pred ccccCCCcCCCcEee-eeecCCCccEEEHHH-hCCCeEEEEEECCCCCCcCHH-HHHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 357899999999999 56 78 8999999 799999999999999999996 589999999999988999 9999999
Q ss_pred CHHHHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceee
Q psy5399 77 DAFVMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTC 148 (156)
Q Consensus 77 ~~~~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~ 148 (156)
+++.+++|++++ +++ ||+++|.+..++++||+..... | ...|++|||| +|+|++.++++.+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~ygv~~~~~--g--~~~P~~~lid~~G~i~~~~~g~~~~~~~~ 153 (202)
T 1uul_A 80 SEYSHLAWTSIERKRGGLGQMN--IPILADKTKCIMKSYGVLKEED--G--VAYRGLFIIDPKQNLRQITVNDLPVGRDV 153 (202)
T ss_dssp CHHHHHHHHHSCGGGTCCCSCS--SCEEECTTCHHHHHHTCEETTT--T--EECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred CHHHHHHHHHHHHhhCCCCCCc--eeEEECCchHHHHHcCCccCCC--C--ceeeEEEEECCCCEEEEEEeCCCCCCCCH
Confidence 999999999998 677 9999999999999999974321 2 2477799999 999999998877766666
Q ss_pred cchhhh
Q psy5399 149 SLVDEL 154 (156)
Q Consensus 149 ~~~~~~ 154 (156)
+++.+.
T Consensus 154 ~ell~~ 159 (202)
T 1uul_A 154 DEALRL 159 (202)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 31
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.97 E-value=3.8e-31 Score=186.26 Aligned_cols=131 Identities=23% Similarity=0.293 Sum_probs=115.9
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
|++++|+++|+|++. +.+|+++++++ ++||++||+||+++|||+|.. ++|.|++++++| .++. |++||.|+++.
T Consensus 14 ~~~~~G~~~P~f~l~-~~~G~~v~l~~-~~gk~vvl~F~~~~~c~~C~~-~~~~l~~~~~~~--~~v~-vv~is~d~~~~ 87 (163)
T 1psq_A 14 KQLQVGDKALDFSLT-TTDLSKKSLAD-FDGKKKVLSVVPSIDTGICST-QTRRFNEELAGL--DNTV-VLTVSMDLPFA 87 (163)
T ss_dssp CCCCTTSBCCCCEEE-CTTSCEEEGGG-GTTSEEEEEECSCTTSHHHHH-HHHHHHHHTTTC--TTEE-EEEEESSCHHH
T ss_pred CCCCCCCCCCCEEEE-cCCCcEeeHHH-hCCCEEEEEEECCCCCCccHH-HHHHHHHHHHHc--CCcE-EEEEECCCHHH
Confidence 457899999999999 79999999999 799999999998899999996 599999999999 6888 99999999999
Q ss_pred HHHHHHHcCC-CcceEEEec-CCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 81 MEAWCRKNNA-EGKIRFLAD-PNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 81 ~~~~~~~~~~-~~~f~~~~D-~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
+++|++++++ + ||+++| +++.++++||+.... .|. ..|++|||| +|+|++.+.+++.
T Consensus 88 ~~~~~~~~~~~~--~~~l~D~~~~~~~~~~gv~~~~--~g~--~~p~~~liD~~G~i~~~~~g~~~ 147 (163)
T 1psq_A 88 QKRWCGAEGLDN--AIMLSDYFDHSFGRDYALLINE--WHL--LARAVFVLDTDNTIRYVEYVDNI 147 (163)
T ss_dssp HHHHHHHHTCTT--SEEEECTTTCHHHHHHTCBCTT--TCS--BCCEEEEECTTCBEEEEEECSBT
T ss_pred HHHHHHhcCCCC--cEEecCCchhHHHHHhCCcccc--CCc--eEEEEEEEcCCCeEEEEEecCCc
Confidence 9999999999 8 999999 889999999997432 121 246799999 9999999987643
No 32
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.97 E-value=1.3e-30 Score=187.92 Aligned_cols=140 Identities=16% Similarity=0.255 Sum_probs=122.3
Q ss_pred cCCCcCCcceecccC--CC--ceeehhhHh-CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCH
Q psy5399 4 QVGDTLPDALLHENT--PQ--TKIQIADAI-KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDA 78 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~--~g--~~~~l~~~~-~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~ 78 (156)
++|+++|+|++. +. +| ++++|++ + +||++||+||+++|||+|.. ++|.|.+++++|++.++. |++||.|++
T Consensus 1 ~~G~~aP~f~l~-~~~~~G~~~~~~l~~-~~~gk~vvl~F~~a~~C~~C~~-~~~~l~~~~~~~~~~~v~-vv~Is~d~~ 76 (192)
T 2h01_A 1 AFQGQAPSFKAE-AVFGDNTFGEVSLSD-FIGKKYVLLYFYPLDFTFVCPS-EIIALDKALDSFKERNVE-LLGCSVDSK 76 (192)
T ss_dssp CCSSBCCCCEEE-EECTTSCEEEEEGGG-GTTTCEEEEEECSCSSCSSCCH-HHHHHHHTHHHHHHTTEE-EEEEESSCH
T ss_pred CCCCcCCCcEeE-eeecCCceeEEeHHH-HcCCCeEEEEEECCCCCCCCHH-HHHHHHHHHHHHHHCCCE-EEEEEeCCH
Confidence 579999999999 67 89 9999999 6 99999999999999999996 599999999999989999 999999999
Q ss_pred HHHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecc
Q psy5399 79 FVMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSL 150 (156)
Q Consensus 79 ~~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~ 150 (156)
+.+++|++++ +++ ||+++|++..++++||+..+ .| ...|++|||| +|+|++..+++.+.+++.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~---~g--~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~ 149 (192)
T 2h01_A 77 FTHLAWKKTPLSQGGIGNIK--HTLISDISKSIARSYDVLFN---ES--VALRAFVLIDKQGVVQHLLVNNLALGRSVDE 149 (192)
T ss_dssp HHHHHHHTSCGGGTCCCSCS--SEEEECTTSHHHHHTTCEET---TT--EECCEEEEECTTSBEEEEEEGGGSSGGGHHH
T ss_pred HHHHHHHHhHHhhCCccCCC--cCeEECCcHHHHHHhCCcCc---CC--ceeeEEEEEcCCCEEEEEEeCCCCCCCCHHH
Confidence 9999999998 677 99999999999999999741 12 2467799999 99999999987766666655
Q ss_pred hhhh
Q psy5399 151 VDEL 154 (156)
Q Consensus 151 ~~~~ 154 (156)
+.+.
T Consensus 150 l~~~ 153 (192)
T 2h01_A 150 ILRL 153 (192)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 33
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.97 E-value=2.2e-30 Score=191.01 Aligned_cols=145 Identities=22% Similarity=0.343 Sum_probs=124.0
Q ss_pred CccCCCcCCcceecc--cCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHH
Q psy5399 2 CAQVGDTLPDALLHE--NTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAF 79 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~--~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~ 79 (156)
++.+|+++|+|++.+ +.+|++++|++ ++||++||+|||++|||+|.. +++.|.+++++|++.+++ |++||.|+.+
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d-~~Gk~vll~F~pa~~Cp~C~~-~~~~l~~l~~~~~~~~v~-vv~Is~D~~~ 102 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDD-FKGKYLVLFFYPLDFTFVCPT-EIIAFSDKASEFHDVNCE-VVAVSVDSHF 102 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGG-GTTSEEEEEECSCTTCSSSHH-HHHHHHHHHHHHHHTTEE-EEEEESSCHH
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHH-hCCCeEEEEEECCCCCCCCHH-HHHHHHHHHHHHHHCCCE-EEEEECCCHH
Confidence 478999999999973 35789999999 799999999999999999996 599999999999999999 9999999999
Q ss_pred HHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecch
Q psy5399 80 VMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLV 151 (156)
Q Consensus 80 ~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~ 151 (156)
.+++|++++ +++ ||+++|.+..++++||+..... | ...|++|||| +|+|++..+++...+++.+++
T Consensus 103 ~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~i~~~ygv~~~~~--g--~~~P~~~liD~~G~I~~~~~g~~~~~~~~~el 176 (220)
T 1zye_A 103 SHLAWINTPRKNGGLGHMN--IALLSDLTKQISRDYGVLLEGP--G--LALRGLFIIDPNGVIKHLSVNDLPVGRSVEET 176 (220)
T ss_dssp HHHHHHTSCGGGTCCCSCS--SEEEECTTSHHHHHTTCEETTT--T--EECEEEEEECTTSBEEEEEEECTTCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCcCCc--eEEEECCcHHHHHHhCCeecCC--C--cccceEEEECCCCEEEEEEecCCCCCCCHHHH
Confidence 999999988 667 9999999999999999974321 2 2467799999 999999998877666666655
Q ss_pred hhhh
Q psy5399 152 DELK 155 (156)
Q Consensus 152 ~~~l 155 (156)
.+.|
T Consensus 177 l~~l 180 (220)
T 1zye_A 177 LRLV 180 (220)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 34
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.97 E-value=4.9e-30 Score=184.15 Aligned_cols=141 Identities=24% Similarity=0.448 Sum_probs=122.3
Q ss_pred ccCCCcCCcceecccCCCc----eeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCH
Q psy5399 3 AQVGDTLPDALLHENTPQT----KIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDA 78 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~----~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~ 78 (156)
+++|+++|+|++. +.+|+ ++++++ ++||++||+||+++|||+|.. ++|.|.+++++|++.++. |++||.|++
T Consensus 1 ~~~G~~~P~f~l~-~~~g~~~~~~~~l~~-~~gk~vvl~F~~a~~C~~C~~-~~~~l~~~~~~~~~~~v~-vv~vs~d~~ 76 (187)
T 1we0_A 1 SLIGTEVQPFRAQ-AFQSGKDFFEVTEAD-LKGKWSIVVFYPADFSFVCPT-ELEDVQKEYAELKKLGVE-VYSVSTDTH 76 (187)
T ss_dssp CCTTCBCCCCEEE-EECSSSCCEEEETTT-TSSSEEEEEECSCTTCSSCTH-HHHHHHHHHHHHHHTTEE-EEEEESSCH
T ss_pred CCCCCcCCCeEEe-ccCCCccceEecHHH-HCCCCEEEEEECCCCCcchHH-HHHHHHHHHHHHHHcCCE-EEEEECCCH
Confidence 5789999999999 78999 999999 799999999999999999996 599999999999988998 999999999
Q ss_pred HHHHHHHHHc----CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecchhh
Q psy5399 79 FVMEAWCRKN----NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLVDE 153 (156)
Q Consensus 79 ~~~~~~~~~~----~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~~~ 153 (156)
+.+++|++++ +++ |++++|.+..+++.||+..... | ...|++|||| +|+|++.+.+..+.+++.+++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~~~--g--~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ 150 (187)
T 1we0_A 77 FVHKAWHENSPAVGSIE--YIMIGDPSQTISRQFDVLNEET--G--LADRGTFIIDPDGVIQAIEINADGIGRDASTLIN 150 (187)
T ss_dssp HHHHHHHHSCHHHHTCC--SEEEECTTCHHHHHTTCEETTT--T--EECEEEEEECTTSBEEEEEEECTTSCCCTTHHHH
T ss_pred HHHHHHHHHhccccCCC--ceEEECCchHHHHHhCCCcCCC--C--ceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHH
Confidence 9999999999 788 9999999999999999974321 1 2467799999 99999999887655555444443
No 35
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.97 E-value=1.7e-30 Score=184.13 Aligned_cols=130 Identities=20% Similarity=0.371 Sum_probs=114.3
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVM 81 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~ 81 (156)
++++|+++|+|++. +.+|+++++++ ++||++||+||+++|||+|.. +++.|++++++| .+++ |++||.|+++.+
T Consensus 20 ~l~~g~~~P~f~l~-~~~G~~~~l~~-~~gk~vvl~f~~~~~C~~C~~-~~~~l~~~~~~~--~~v~-vv~Is~d~~~~~ 93 (171)
T 2yzh_A 20 ELKVGDRAPEAVVV-TKDLQEKIVGG-AKDVVQVIITVPSLDTPVCET-ETKKFNEIMAGM--EGVD-VTVVSMDLPFAQ 93 (171)
T ss_dssp CCCTTSBCCCEEEE-ETTSCEEEESS-CCSSEEEEEECSCTTSHHHHH-HHHHHHHHTTTC--TTEE-EEEEESSCHHHH
T ss_pred cCCCCCcCCceEEE-CCCCCEeeHHH-hCCCeEEEEEECCCCCCchHH-HHHHHHHHHHHc--CCce-EEEEeCCCHHHH
Confidence 47899999999999 79999999999 799999999999999999996 599999999999 6888 999999999999
Q ss_pred HHHHHHcCC-CcceEEEec-CCchhHHhhCCeeeccC-CCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 82 EAWCRKNNA-EGKIRFLAD-PNLEFTKKLGVEHEIPV-LGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 82 ~~~~~~~~~-~~~f~~~~D-~~~~~~~~~gv~~~~~~-~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
++|++++++ + ||+++| +++.+ ++||+...... .| ...|++|||| +|+|++.+++++
T Consensus 94 ~~~~~~~~~~~--~~~l~D~~~~~~-~~~gv~~~~~~~~g--~~~p~~~liD~~G~i~~~~~~~~ 153 (171)
T 2yzh_A 94 KRFCESFNIQN--VTVASDFRYRDM-EKYGVLIGEGALKG--ILARAVFIIDKEGKVAYVQLVPE 153 (171)
T ss_dssp HHHHHHTTCCS--SEEEECTTTCGG-GGGTCBBCSSTTTT--SBCCEEEEECTTSBEEEEEECSB
T ss_pred HHHHHHcCCCC--eEEeecCccCcH-HHhCCEecccccCC--ceeeEEEEEcCCCeEEEEEeCCC
Confidence 999999999 7 999999 88899 99999753211 12 1357799999 999999998654
No 36
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.97 E-value=3.5e-30 Score=186.54 Aligned_cols=143 Identities=22% Similarity=0.371 Sum_probs=123.7
Q ss_pred CccCCCcCCcceecccC-CC--ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCH
Q psy5399 2 CAQVGDTLPDALLHENT-PQ--TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDA 78 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~-~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~ 78 (156)
++.+|+++|+|++. +. +| ++++|++ ++||++||+||+++|||+|.. +++.|.+++++|++.++. |++||.|+.
T Consensus 4 ~l~~G~~aP~f~l~-~~~~g~~~~v~l~~-~~gk~vvl~F~~a~~C~~C~~-~~~~l~~l~~~~~~~~v~-vv~Is~d~~ 79 (197)
T 1qmv_A 4 NARIGKPAPDFKAT-AVVDGAFKEVKLSD-YKGKYVVLFFYPLDFTFVAPT-EIIAFSNRAEDFRKLGCE-VLGVSVDSQ 79 (197)
T ss_dssp TBCTTSBCCCCEEE-EEETTEEEEEEGGG-GTTSEEEEEECSCTTSSHHHH-HHHHHHHTHHHHHTTTEE-EEEEESSCH
T ss_pred cccCCCCCCCeEeE-eecCCCccEEEHHH-HCCCeEEEEEECCCCCCCCHH-HHHHHHHHHHHHHHCCCE-EEEEECCCH
Confidence 57899999999999 56 78 9999999 799999999999999999996 589999999999988998 999999999
Q ss_pred HHHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecc
Q psy5399 79 FVMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSL 150 (156)
Q Consensus 79 ~~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~ 150 (156)
+.+++|++++ +++ ||++.|.++.++++||+..... | ...|++|||| +|+|++.++++.+.+++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~~gv~~~~~--~--~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e 153 (197)
T 1qmv_A 80 FTHLAWINTPRKEGGLGPLN--IPLLADVTRRLSEDYGVLKTDE--G--IAYRGLFIIDGKGVLRQITVNDLPVGRSVDE 153 (197)
T ss_dssp HHHHHHHTSCGGGTCCCSCS--SCEEECTTCHHHHHTTCEETTT--T--EECEEEEEECTTSBEEEEEEECTTBCCCHHH
T ss_pred HHHHHHHHHHHhhCCCCCCc--eEEEECCcHHHHHHcCCccCCC--C--ceeeEEEEECCCCcEEEEEeCCCCCCCCHHH
Confidence 9999999988 777 9999999999999999974321 1 2467799999 99999999887766666555
Q ss_pred hhhh
Q psy5399 151 VDEL 154 (156)
Q Consensus 151 ~~~~ 154 (156)
+.+.
T Consensus 154 ~l~~ 157 (197)
T 1qmv_A 154 ALRL 157 (197)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 37
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.97 E-value=2.4e-30 Score=191.07 Aligned_cols=144 Identities=22% Similarity=0.359 Sum_probs=121.5
Q ss_pred CCccCCCcCCcceecccC-C--CceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC
Q psy5399 1 MCAQVGDTLPDALLHENT-P--QTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND 77 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~-~--g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~ 77 (156)
|++++|+++|+|++. +. + |++++|++ ++||++||+||.++||++|.. ++|.|++++++|+++++. |++||.|+
T Consensus 38 ~~l~~G~~aP~f~l~-~~~d~~G~~v~l~~-~~Gk~vll~F~a~~wC~~C~~-~~p~l~~l~~~~~~~~v~-vv~Is~D~ 113 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQ-AVINGEFKEICLKD-YRGKYVVLFFYPADFTFVCPT-EIIAFSDQVEEFNSRNCQ-VIACSTDS 113 (222)
T ss_dssp --CCSSEECCCCEEE-EEETTEEEEEEGGG-GTTSEEEEEECSCSSCSHHHH-HHHHHHHTHHHHHTTTEE-EEEEESSC
T ss_pred ccccCCCCCCCeEEe-cccCCCCcEEeHHH-hCCCeEEEEEECCCCCCchHH-HHHHHHHHHHHHHHCCCE-EEEEECCC
Confidence 468999999999999 45 4 49999999 799999999997799999996 699999999999988998 99999999
Q ss_pred HHHHHHHHHHc-------CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeec
Q psy5399 78 AFVMEAWCRKN-------NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCS 149 (156)
Q Consensus 78 ~~~~~~~~~~~-------~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~ 149 (156)
++..++|++++ +++ ||+++|++..+++.||+..... | ...|++|||| +|+|++.+.+....++..+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~ygv~~~~~--g--~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ 187 (222)
T 3ztl_A 114 QYSHLAWDNLDRKSGGLGHMK--IPLLADRKQEISKAYGVFDEED--G--NAFRGLFIIDPNGILRQITINDKPVGRSVD 187 (222)
T ss_dssp HHHHHHHHHSCGGGTSCCSCS--SCEEECSSSHHHHHTTCBCTTT--S--SBCEEEEEECTTSEEEEEEEECTTBCCCHH
T ss_pred HHHHHHHHHHhhhhccccccc--eeEEeCCchHHHHHcCCeecCC--C--CccceEEEECCCCeEEEEEecCCCCCCCHH
Confidence 99999999987 777 9999999999999999974321 2 1356799999 9999999998777666555
Q ss_pred chhhh
Q psy5399 150 LVDEL 154 (156)
Q Consensus 150 ~~~~~ 154 (156)
++.+.
T Consensus 188 ~il~~ 192 (222)
T 3ztl_A 188 ETLRL 192 (222)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 38
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.96 E-value=1.3e-29 Score=183.56 Aligned_cols=140 Identities=19% Similarity=0.260 Sum_probs=121.0
Q ss_pred ccCCCcCCcceecccC--CCc---eeehhhHh-CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 3 AQVGDTLPDALLHENT--PQT---KIQIADAI-KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~--~g~---~~~l~~~~-~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
+++|+++|+|++. +. +|+ +++|++ + +||++||+||+++|||+|.. ++|.|.+++++|++.++. |++||.|
T Consensus 1 ~~~G~~~P~f~l~-~~~~~G~~~~~v~l~~-~~~gk~vvl~F~~a~~C~~C~~-~~~~l~~l~~~~~~~~v~-vv~Is~d 76 (198)
T 1zof_A 1 MVVTKLAPDFKAP-AVLGNNEVDEHFELSK-NLGKNGVILFFWPKDFTFVCPT-EIIAFDKRVKDFHEKGFN-VIGVSID 76 (198)
T ss_dssp CCTTSBCCCCEEE-EECTTSCEEEEEETTT-SCCSSEEEEEECSCTTCSSCCT-HHHHHHHTHHHHHHTTEE-EEEEESS
T ss_pred CCCCCcCCceEee-cccCCCcccceEEHHH-HhCCCcEEEEEECCCCCCchHH-HHHHHHHHHHHHHHcCCE-EEEEECC
Confidence 5789999999999 67 898 999999 7 99999999999999999995 599999999999998998 9999999
Q ss_pred CHHHHHHHHHH-------cCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceee
Q psy5399 77 DAFVMEAWCRK-------NNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTC 148 (156)
Q Consensus 77 ~~~~~~~~~~~-------~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~ 148 (156)
+++.+++|+++ ++++ ||+++|++..++++||+.... | ...|++|||| +|+|++.+.+..+.+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~~---g--~~~P~~~lid~~G~i~~~~~g~~~~~~~~ 149 (198)
T 1zof_A 77 SEQVHFAWKNTPVEKGGIGQVS--FPMVADITKSISRDYDVLFEE---A--IALRGAFLIDKNMKVRHAVINDLPLGRNA 149 (198)
T ss_dssp CHHHHHHHHTSCGGGTCCCCCS--SCEEECTTSHHHHHTTCEETT---T--EECEEEEEEETTTEEEEEEEESSSCCCHH
T ss_pred CHHHHHHHHHhhhhcccccCce--eEEEECCchHHHHHhCCcccC---C--cccceEEEECCCCEEEEEEecCCCCCCCH
Confidence 99999999999 7887 999999999999999997421 2 2467799999 999999998765555544
Q ss_pred cchhh
Q psy5399 149 SLVDE 153 (156)
Q Consensus 149 ~~~~~ 153 (156)
+++.+
T Consensus 150 ~~l~~ 154 (198)
T 1zof_A 150 DEMLR 154 (198)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 39
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.96 E-value=1.2e-30 Score=182.75 Aligned_cols=130 Identities=26% Similarity=0.431 Sum_probs=113.4
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCC--eEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGK--KVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAF 79 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk--~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~ 79 (156)
++++|+++|+|++. +.+|++++|++ ++|+ ++||+||+++|||+|.. ++|.|++++++|++++ . |++||.|+++
T Consensus 6 ~~~~G~~~P~f~l~-~~~G~~v~l~~-~~gk~~~vvl~f~~~~~c~~C~~-~~~~l~~~~~~~~~~~-~-vv~is~d~~~ 80 (159)
T 2a4v_A 6 ELEIGDPIPDLSLL-NEDNDSISLKK-ITENNRVVVFFVYPRASTPGSTR-QASGFRDNYQELKEYA-A-VFGLSADSVT 80 (159)
T ss_dssp CCCTTCBCCSCEEE-CTTSCEEEHHH-HHHHCSEEEEEECSSSSSHHHHH-HHHHHHHHHHHHTTTC-E-EEEEESCCHH
T ss_pred cCCCCCCCCCeEEE-CCCCCEEeHHH-HhCCCCeEEEEEcCCCCCCCHHH-HHHHHHHHHHHHHhCC-c-EEEEeCCCHH
Confidence 57899999999999 79999999999 6776 78999999999999995 6999999999999888 6 9999999999
Q ss_pred HHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 80 VMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
.+++|+++++++ ||+++|+++.++++||+.... ..| ..|++|||.+|+|++.+.+..
T Consensus 81 ~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~p-~~g---~~~~~~li~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 81 SQKKFQSKQNLP--YHLLSDPKREFIGLLGAKKTP-LSG---SIRSHFIFVDGKLKFKRVKIS 137 (159)
T ss_dssp HHHHHHHHHTCS--SEEEECTTCHHHHHHTCBSSS-SSC---BCCEEEEEETTEEEEEEESCC
T ss_pred HHHHHHHHhCCC--ceEEECCccHHHHHhCCcccc-cCC---ccceEEEEcCCEEEEEEccCC
Confidence 999999999998 999999999999999997532 112 234467669999999998643
No 40
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.96 E-value=8.6e-30 Score=184.18 Aligned_cols=140 Identities=20% Similarity=0.354 Sum_probs=120.4
Q ss_pred CccCCCcCCcceecccCC-------------C--ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcC
Q psy5399 2 CAQVGDTLPDALLHENTP-------------Q--TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKG 66 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~-------------g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~ 66 (156)
++++|+++|+|++. +.+ | +++++++ ++||++||+||+++|||+|.. ++|.|.+++++|++.+
T Consensus 3 ~l~~G~~~P~f~l~-~~~~~~~~~~~~~~~~G~~~~v~l~~-~~gk~vvl~F~~a~~C~~C~~-~~~~l~~l~~~~~~~~ 79 (195)
T 2bmx_A 3 LLTIGDQFPAYQLT-ALIGGDLSKVDAKQPGDYFTTITSDE-HPGKWRVVFFWPKDFTFVCPT-EIAAFSKLNDEFEDRD 79 (195)
T ss_dssp BCCTTCBCCCCEEE-EECSSCGGGSCCSSGGGGEEEEETTS-STTCEEEEEECSCTTSCCCHH-HHHHHHHTHHHHHTTT
T ss_pred cCCCCCcCCCcCcc-cccccccccccccccCCCccEeeHHH-hCCCcEEEEEEcCCCCCCcHH-HHHHHHHHHHHHHHCC
Confidence 38899999999999 576 6 8999999 799999999999999999996 5999999999999888
Q ss_pred CCEEEEEecCCHHHHHHHHHHc----CCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEcc
Q psy5399 67 IHEIFCIAVNDAFVMEAWCRKN----NAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEP 141 (156)
Q Consensus 67 ~~~v~~is~d~~~~~~~~~~~~----~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~ 141 (156)
+. |++||.|+++.+++|++++ +++ |++++|++..+++.||+... .| ...|++|||| +|+|++.+.+.
T Consensus 80 v~-vv~Vs~d~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~---~g--~~~P~~~lid~~G~i~~~~~g~ 151 (195)
T 2bmx_A 80 AQ-ILGVSIDSEFAHFQWRAQHNDLKTLP--FPMLSDIKRELSQAAGVLNA---DG--VADRVTFIVDPNNEIQFVSATA 151 (195)
T ss_dssp EE-EEEEESSCHHHHHHHHHHCTTGGGCC--SCEEECTTSHHHHHHTCBCT---TS--SBCEEEEEECTTSBEEEEEEEC
T ss_pred CE-EEEEECCCHHHHHHHHHHhccccCCc--eeEEeCCchHHHHHhCCccc---CC--CccceEEEEcCCCeEEEEEecC
Confidence 98 9999999999999999998 787 99999999999999999642 12 1356699999 99999999887
Q ss_pred CCCceeecchh
Q psy5399 142 DGTGLTCSLVD 152 (156)
Q Consensus 142 ~~~~~~~~~~~ 152 (156)
.+..++.+++.
T Consensus 152 ~~~~~~~~~l~ 162 (195)
T 2bmx_A 152 GSVGRNVDEVL 162 (195)
T ss_dssp TTCCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 65544444433
No 41
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.96 E-value=4.7e-30 Score=192.51 Aligned_cols=144 Identities=20% Similarity=0.397 Sum_probs=125.4
Q ss_pred CccCCCcCCcceecccCCCceeeh-hhHh--CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQI-ADAI--KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDA 78 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l-~~~~--~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~ 78 (156)
|+.+|+++|+|++. +.+| +++| ++ + +||++||+|||++|||+|.. +++.|.+++++|+++|++ |++||.|+.
T Consensus 4 ~~~iG~~aPdF~l~-~~~G-~v~l~~d-~l~~GK~vVL~~fpa~~CpvC~t-El~~l~~l~~ef~~~gv~-VI~VS~Ds~ 78 (249)
T 3a2v_A 4 IPLIGERFPEMEVT-TDHG-VIKLPDH-YVSQGKWFVLFSHPADFTPVCTT-EFVSFARRYEDFQRLGVD-LIGLSVDSV 78 (249)
T ss_dssp ECCTTSBCCCEEEE-ETTE-EEEETHH-HHTTTCEEEEECCSCTTCHHHHH-HHHHHHHTHHHHHHTTEE-EEEEESSCH
T ss_pred cCCCCCCCCCeEEE-cCCC-CEecHHH-HhhCCCEEEEEEEcCCCCcChHH-HHHHHHHHHHHHHhCCcE-EEEEECCCH
Confidence 57899999999999 6888 7999 99 6 99999999999999999996 599999999999999999 999999999
Q ss_pred HHHHHHHHH------cCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecch
Q psy5399 79 FVMEAWCRK------NNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLV 151 (156)
Q Consensus 79 ~~~~~~~~~------~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~ 151 (156)
+.+.+|.+. .+++ ||+++|+++.+++.||+..... | ..+.|++|||| +|+|+++.+++.+.+|+.+++
T Consensus 79 ~~~~~w~~~~~~~~~~~i~--fPil~D~~~~ia~~ygv~~~~~--g-~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~El 153 (249)
T 3a2v_A 79 FSHIKWKEWIERHIGVRIP--FPIIADPQGTVARRLGLLHAES--A-THTVRGVFIVDARGVIRTMLYYPMELGRLVDEI 153 (249)
T ss_dssp HHHHHHHHHHHHHTCCCCC--SCEEECTTSHHHHHHTCCCTTC--S-SSCCEEEEEECTTSBEEEEEEECTTBCCCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCc--eeEEECCchHHHHHhCCccccC--C-CcccceEEEECCCCeEEEEEecCCcccchhHHH
Confidence 999888875 4666 9999999999999999975322 2 22577799999 999999999988888887776
Q ss_pred hhhh
Q psy5399 152 DELK 155 (156)
Q Consensus 152 ~~~l 155 (156)
.++|
T Consensus 154 lr~I 157 (249)
T 3a2v_A 154 LRIV 157 (249)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 42
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.96 E-value=5.7e-30 Score=178.97 Aligned_cols=134 Identities=23% Similarity=0.328 Sum_probs=117.0
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCC-eEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGK-KVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
|+.+|+++|+|++. +.+|+.+++++ ++|+ ++||+||+++||++|.. +++.|.+++++|++.++. |++||.|+++.
T Consensus 8 ~~~~G~~~p~f~l~-~~~G~~~~l~~-~~gk~~vvl~F~~a~~C~~C~~-~~~~l~~~~~~~~~~~~~-vv~is~d~~~~ 83 (160)
T 1xvw_A 8 MLNVGATAPDFTLR-DQNQQLVTLRG-YRGAKNVLLVFFPLAFTGICQG-ELDQLRDHLPEFENDDSA-ALAISVGPPPT 83 (160)
T ss_dssp CCCTTSBCCCCEEE-CTTSCEEEGGG-GTTTCEEEEEECSCTTSSHHHH-HHHHHHHTGGGTSSSSEE-EEEEESCCHHH
T ss_pred CCCCCCCCCCeEeE-cCCCCEEeHHH-hcCCCCEEEEEECCCCCCchHH-HHHHHHHHHHHHHHCCcE-EEEEeCCCHHH
Confidence 38899999999999 79999999999 7998 89999999999999995 589999999999877888 99999999999
Q ss_pred HHHHHHHcCCCcceEEEecC--CchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCc
Q psy5399 81 MEAWCRKNNAEGKIRFLADP--NLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTG 145 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~--~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~ 145 (156)
+++|+++++++ ||+++|. ++.+++.||+.... ...+ .|++|||| +|+|++.+.+.....
T Consensus 84 ~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~v~~~~---~~~p-~~~~~lid~~G~i~~~~~g~~~~~ 145 (160)
T 1xvw_A 84 HKIWATQSGFT--FPLLSDFWPHGAVSQAYGVFNEQ---AGIA-NRGTFVVDRSGIIRFAEMKQPGEV 145 (160)
T ss_dssp HHHHHHHHTCC--SCEEECTTTTTHHHHHTTCEETT---TTEE-CSEEEEECTTSBEEEEEECCTTCC
T ss_pred HHHHHHhcCCC--ceEEecCCcChHHHHHcCCcccc---CCCe-eeeEEEECCCCeEEEEEecCCCCC
Confidence 99999999998 9999995 89999999997422 1122 23699999 999999998765433
No 43
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.95 E-value=5.1e-29 Score=193.28 Aligned_cols=120 Identities=17% Similarity=0.207 Sum_probs=105.6
Q ss_pred CcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHH
Q psy5399 7 DTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCR 86 (156)
Q Consensus 7 ~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~ 86 (156)
.++|+|+|+ +.+|++++|+| ++||+|||+|||++|||+|.. +++.|++. ...+++ |++||.|+++.+++|++
T Consensus 2 ak~p~F~l~-~~~G~~~~Lsd-~~Gk~vvl~F~p~~~tp~C~~-e~~~~~~~----~~~~~~-v~gis~D~~~~~~~f~~ 73 (322)
T 4eo3_A 2 ARVKHFELL-TDEGKTFTHVD-LYGKYTILFFFPKAGTSGSTR-EAVEFSRE----NFEKAQ-VVGISRDSVEALKRFKE 73 (322)
T ss_dssp CBCCCCEEE-ETTSCEEEGGG-TTTSEEEEEECSSTTSHHHHH-HHHHHHHS----CCTTEE-EEEEESCCHHHHHHHHH
T ss_pred CCCCCcEEE-CCCcCEEeHHH-hCCCeEEEEEECCCCCCCCHH-HHHHHHHH----hhCCCE-EEEEeCCCHHHHHHHHH
Confidence 379999999 79999999999 799999999999999999996 58888652 224777 99999999999999999
Q ss_pred HcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 87 KNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 87 ~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
+++++ ||+++|+++.++++||+... ..+.|+||||| +|+|++++....
T Consensus 74 ~~~l~--fp~l~D~~~~v~~~ygv~~~------~~~~r~tfiId~~G~i~~~~~~v~ 122 (322)
T 4eo3_A 74 KNDLK--VTLLSDPEGILHEFFNVLEN------GKTVRSTFLIDRWGFVRKEWRRVK 122 (322)
T ss_dssp HHTCC--SEEEECTTCHHHHHTTCEET------TEECCEEEEECTTSBEEEEEESCC
T ss_pred hhCCc--eEEEEcCchHHHHhcCCCCC------CcCccEEEEECCCCEEEEEEeCCC
Confidence 99999 99999999999999999742 24567899999 999999987644
No 44
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.95 E-value=1.7e-28 Score=180.58 Aligned_cols=122 Identities=12% Similarity=0.141 Sum_probs=110.1
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCe-EEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec-----
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKK-VIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV----- 75 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~-vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~----- 75 (156)
++++|+++|+|++. +.+|++++|++ ++||+ +||+|| ++|||+|.. ++|.|.+++++|+++++. |++|+.
T Consensus 31 ~l~~G~~aP~f~l~-~~~G~~v~l~~-~~gk~~vll~F~-a~~C~~C~~-~~~~l~~l~~~~~~~~v~-vv~Vs~d~~~~ 105 (218)
T 3u5r_E 31 SITLGTRAADFVLP-DAGGNLFTLAE-FKDSPALLVAFI-SNRCPFVVL-IREALAKFAGDYAGQGLA-VVAINSNDAQA 105 (218)
T ss_dssp CCCTTCBCCCCCEE-CTTCCEECGGG-GTTCSEEEEEEC-CSSCHHHHT-THHHHHHHHHHHTTTTEE-EEEEECSCTTT
T ss_pred cCCCCCcCCCcEeE-CCCCCEEeHHH-hCCCCeEEEEEE-CCCCccHHH-HHHHHHHHHHHHHhCCcE-EEEEECCcccc
Confidence 57899999999999 79999999999 79997 666666 899999995 699999999999988898 999998
Q ss_pred ---CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 76 ---NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 76 ---d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
++++.+++|+++++++ ||++.|.+..++++||+.. .|++|||| +|+|++....
T Consensus 106 ~~~d~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~~v~~----------~P~~~liD~~G~i~~~g~~ 162 (218)
T 3u5r_E 106 FPEETLERVGAEVKAYGYG--FPYLKDASQSVAKAYGAAC----------TPDFFLYDRERRLVYHGQF 162 (218)
T ss_dssp CGGGSHHHHHHHHHHHTCC--SCEEECTTCHHHHHHTCCE----------ESEEEEECTTCBEEEEECS
T ss_pred cccCCHHHHHHHHHHhCCC--ccEEECCccHHHHHcCCCC----------CCeEEEECCCCcEEEeccc
Confidence 7899999999999998 9999999999999999953 56699998 9999988654
No 45
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.95 E-value=4.2e-28 Score=172.62 Aligned_cols=131 Identities=19% Similarity=0.342 Sum_probs=107.3
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
+++++|+++|+|++. +.+|+++++++ ++||++||+||++.|||+|.. ++|.|++++++ .++. |++||.|+++.
T Consensus 16 ~~l~~G~~~P~f~l~-~~~G~~v~l~~-~~gk~vvl~F~~t~~C~~C~~-~~~~l~~l~~~---~~v~-vv~Is~D~~~~ 88 (175)
T 1xvq_A 16 ELPAVGSPAPAFTLT-GGDLGVISSDQ-FRGKSVLLNIFPSVDTPVCAT-SVRTFDERAAA---SGAT-VLCVSKDLPFA 88 (175)
T ss_dssp CCCCTTSBCCCCEEE-CTTSCEEEGGG-GTTSCEEEEECSCCCSSCCCH-HHHHHHHHHHH---TTCE-EEEEESSCHHH
T ss_pred CCCCcCCcCCCeEEE-CCCCCEEeHHH-cCCCEEEEEEEeCCCCchHHH-HHHHHHHHHhh---cCCE-EEEEECCCHHH
Confidence 357899999999999 79999999999 799999999984444999996 59999999988 6888 99999999999
Q ss_pred HHHHHHHcCC-CcceEEEecCCchhHHhhCCeeecc-CCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 81 MEAWCRKNNA-EGKIRFLADPNLEFTKKLGVEHEIP-VLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 81 ~~~~~~~~~~-~~~f~~~~D~~~~~~~~~gv~~~~~-~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
+++|++++++ + |++++|++..++++||+..... ..| ...|++|||| +|+|++.+++.+
T Consensus 89 ~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~~~~~~g--~~~p~~~lid~~G~I~~~~~g~~ 149 (175)
T 1xvq_A 89 QKRFCGAEGTEN--VMPASAFRDSFGEDYGVTIADGPMAG--LLARAIVVIGADGNVAYTELVPE 149 (175)
T ss_dssp HTTCC------C--EEEEECTTSSHHHHTTCBBCSSTTTT--SBCSEEEEECTTSBEEEEEECSB
T ss_pred HHHHHHHcCCCC--ceEeeCCHHHHHHHhCCcccccccCC--cccceEEEECCCCeEEEEEECCC
Confidence 9999999998 7 9999999999999999975321 112 2356799999 999999998533
No 46
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.95 E-value=1.6e-28 Score=172.94 Aligned_cols=129 Identities=24% Similarity=0.422 Sum_probs=112.4
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCC-CCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAF-TPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAF 79 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~-cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~ 79 (156)
+.+++|+++|+|++. +.+|+++++++ ++||+++|+|| ++| ||+|+. ++|.|++++++| .++. +++||.|+++
T Consensus 16 ~~~~~G~~~p~f~l~-~~~G~~~~l~~-~~gk~~vl~F~-~~~~C~~C~~-~~~~l~~l~~~~--~~~~-vv~is~d~~~ 88 (167)
T 2jsy_A 16 QEVKVGDQAPDFTVL-TNSLEEKSLAD-MKGKVTIISVI-PSIDTGVCDA-QTRRFNEEAAKL--GDVN-VYTISADLPF 88 (167)
T ss_dssp CCCCTTSCCCCCEEE-BTTCCEEEHHH-HTTSCEEEEEC-SCSTTSHHHH-THHHHHHHHHHH--SSCE-EEEEECSSGG
T ss_pred CccCCCCcCCceEEE-CCCCCEeeHHH-hCCCeEEEEEe-cCCCCCchHH-HHHHHHHHHHHc--CCCE-EEEEECCCHH
Confidence 357899999999999 79999999999 69999999998 666 999996 599999999999 6888 9999999999
Q ss_pred HHHHHHHHcCC-CcceEEEec-CCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 80 VMEAWCRKNNA-EGKIRFLAD-PNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 80 ~~~~~~~~~~~-~~~f~~~~D-~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
.+++|++++++ + ||+++| .++.+++.||+.... .|. ..|++|||| +|+|++.+.+..
T Consensus 89 ~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~v~~~~--~g~--~~p~~~lid~~G~i~~~~~g~~ 148 (167)
T 2jsy_A 89 AQARWCGANGIDK--VETLSDHRDMSFGEAFGVYIKE--LRL--LARSVFVLDENGKVVYAEYVSE 148 (167)
T ss_dssp GTSCCGGGSSCTT--EEEEEGGGTCHHHHHTTCBBTT--TCS--BCCEEEEECTTSCEEEEEECSB
T ss_pred HHHHHHHhcCCCC--ceEeeCCchhHHHHHhCCcccc--CCc--eeeEEEEEcCCCcEEEEEecCC
Confidence 99999999999 7 999999 889999999996421 121 246699999 999999998653
No 47
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.95 E-value=1.4e-27 Score=164.99 Aligned_cols=125 Identities=20% Similarity=0.278 Sum_probs=112.5
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAF 79 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~ 79 (156)
|++++|+++|+|++. + +|+.+++++ ++||+++|+|| ++|||+|.. .++.|.+++++|++.++. +++|+.+ +.+
T Consensus 1 m~l~~G~~~P~f~l~-~-~g~~~~l~~-~~gk~vll~f~-~~~C~~C~~-~~~~l~~l~~~~~~~~~~-~v~v~~d~~~~ 74 (152)
T 3gl3_A 1 MSLDKGDKAPDFALP-G-KTGVVKLSD-KTGSVVYLDFW-ASWCGPCRQ-SFPWMNQMQAKYKAKGFQ-VVAVNLDAKTG 74 (152)
T ss_dssp -CCCTTSBCCCCEEE-B-SSSEEEGGG-GTTSEEEEEEE-CTTCTHHHH-HHHHHHHHHHHHGGGTEE-EEEEECCSSHH
T ss_pred CCCCCCCcCCceEee-C-CCCeEeHHH-hCCCEEEEEEE-CCcCHHHHH-HHHHHHHHHHHhhcCCeE-EEEEECCCCHH
Confidence 789999999999999 7 999999999 79999999888 999999995 589999999999988888 9999987 678
Q ss_pred HHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 80 VMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
..++|.++++++ |+++.|.+..+++.||+. ..|++|||| +|+|++.+.+..+
T Consensus 75 ~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~g~~~ 127 (152)
T 3gl3_A 75 DAMKFLAQVPAE--FTVAFDPKGQTPRLYGVK----------GMPTSFLIDRNGKVLLQHVGFRP 127 (152)
T ss_dssp HHHHHHHHSCCC--SEEEECTTCHHHHHTTCC----------SSSEEEEECTTSBEEEEEESCCT
T ss_pred HHHHHHHHcCCC--CceeECCcchhHHHcCCC----------CCCeEEEECCCCCEEEEEccCCC
Confidence 899999999998 999999999999999994 245589998 9999999887543
No 48
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.95 E-value=2.9e-27 Score=166.97 Aligned_cols=133 Identities=12% Similarity=0.102 Sum_probs=111.7
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCC-CCCcCChhhHHHhHHHHHHcC--CCEEEEEecC--
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTP-GCSVTHLPGYLAKEKDLKAKG--IHEIFCIAVN-- 76 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp-~C~~~~l~~l~~~~~~~~~~~--~~~v~~is~d-- 76 (156)
.+++|+++|+|++. +.+|+.+++++ ++||++||+|| ++||| +|.. +++.|.+++++|++.+ +. |++||.|
T Consensus 6 ~l~~g~~~p~f~l~-~~~G~~~~l~~-~~gk~vll~f~-~~~C~~~C~~-~~~~l~~l~~~~~~~~~~~~-vv~is~d~~ 80 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQ-NQDGKNVSLES-LKGEVWLADFI-FTNCETICPP-MTAHMTDLQKKLKAENIDVR-IISFSVDPE 80 (174)
T ss_dssp CSCCCEECCCCEEE-CTTSCEEETGG-GTTCCEEEEEE-CSCCSSCCCS-HHHHHHHHHHHHHHTTCCCE-EEEEESCTT
T ss_pred cCccccccCCcEEE-cCCCCEEehhh-cCCCEEEEEEE-cCCCcchhHH-HHHHHHHHHHHhhhcCCcEE-EEEEEeCCC
Confidence 57899999999999 79999999999 79999999988 99999 9995 5999999999999886 88 9999986
Q ss_pred --CHHHHHHHHHHcCCCcce---EEEecCCchhHHhhCCe-----eec--cCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 77 --DAFVMEAWCRKNNAEGKI---RFLADPNLEFTKKLGVE-----HEI--PVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 77 --~~~~~~~~~~~~~~~~~f---~~~~D~~~~~~~~~gv~-----~~~--~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
+++.+++|+++++++ | +++.|++..++++|++. ... ...+. ...|++|||| +|+|++.+.+..
T Consensus 81 ~d~~~~~~~~~~~~~~~--~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~lid~~G~i~~~~~g~~ 156 (174)
T 1xzo_A 81 NDKPKQLKKFAANYPLS--FDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQV-IHQSSFYLVGPDGKVLKDYNGVE 156 (174)
T ss_dssp TCCHHHHHHHHTTSCCC--GGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSC-CSCCEEEEECTTSEEEEEEESSS
T ss_pred CCCHHHHHHHHHHcCCC--CcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCee-eeeeEEEEECCCCeEEEEEcCCC
Confidence 689999999999998 7 99999988888877641 100 00111 2356689999 999999988754
No 49
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.95 E-value=7.8e-28 Score=166.89 Aligned_cols=123 Identities=17% Similarity=0.168 Sum_probs=111.0
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHH
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAF 79 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~ 79 (156)
|.+++|+++|+|++. +.+|+.+++++ ++||+++|+|| ++|||+|.. ++|.|.+++++|.+.++. |++|+.| +.+
T Consensus 1 m~l~~g~~~p~f~l~-~~~G~~~~l~~-~~gk~vll~F~-a~~C~~C~~-~~~~l~~l~~~~~~~~~~-vv~v~~d~~~~ 75 (152)
T 2lrn_A 1 MSLATGSVAPAITGI-DLKGNSVSLND-FKGKYVLVDFW-FAGCSWCRK-ETPYLLKTYNAFKDKGFT-IYGVSTDRREE 75 (152)
T ss_dssp CCSCTTEECCCCEEE-CSSSCEEESGG-GTTSEEEEEEE-CTTCTTHHH-HHHHHHHHHHHHTTTTEE-EEEEECCSCHH
T ss_pred CCccCCCcCCCceeE-cCCCCEEeHHH-cCCCEEEEEEE-CCCChhHHH-HHHHHHHHHHHhccCCeE-EEEEEccCCHH
Confidence 889999999999999 79999999999 79999999988 999999996 589999999999988888 9999987 578
Q ss_pred HHHHHHHHcCCCcceEEEecC---CchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 80 VMEAWCRKNNAEGKIRFLADP---NLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~D~---~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
..++|.++++++ |+++.|+ +..++++||+. ..|++||+| +|+|++.++.
T Consensus 76 ~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~~ 128 (152)
T 2lrn_A 76 DWKKAIEEDKSY--WNQVLLQKDDVKDVLESYCIV----------GFPHIILVDPEGKIVAKELR 128 (152)
T ss_dssp HHHHHHHHHTCC--SEEEEECHHHHHHHHHHTTCC----------SSCEEEEECTTSEEEEECCC
T ss_pred HHHHHHHHhCCC--CeEEecccchhHHHHHHhCCC----------cCCeEEEECCCCeEEEeeCC
Confidence 899999999998 9999999 68999999984 245589998 9999999753
No 50
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.95 E-value=5.4e-28 Score=168.45 Aligned_cols=139 Identities=17% Similarity=0.221 Sum_probs=116.4
Q ss_pred CCccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCC-hhhHHHhHHHHHHcCCCEEEEEec----
Q psy5399 1 MCAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTH-LPGYLAKEKDLKAKGIHEIFCIAV---- 75 (156)
Q Consensus 1 m~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~-l~~l~~~~~~~~~~~~~~v~~is~---- 75 (156)
|..-.|.++|+|++.+..+|+.+++++ ++||+++|+|| ++|||+|.. + +|.|.+++++|+++++. +++|+.
T Consensus 1 ms~~~g~~~p~~~~~~~~~g~~~~l~~-~~gk~vlv~F~-a~~C~~C~~-e~~~~l~~l~~~~~~~~v~-~v~v~~~~~~ 76 (160)
T 3lor_A 1 MSSLDNAPLLELDVQEWVNHEGLSNED-LRGKVVVVEVF-QMLCPGCVN-HGVPQAQKIHRMIDESQVQ-VIGLHSVFEH 76 (160)
T ss_dssp ---CTTCCBCCCCEEEESSSCCCCHHH-HTTSEEEEEEE-CTTCHHHHH-THHHHHHHHHHHSCTTTEE-EEEEECCCSC
T ss_pred CcccCCCcCCCcccccccCCCccCHHH-hCCCEEEEEEE-cCCCcchhh-hhhHHHHHHHHHhCcCCcE-EEEEeccccc
Confidence 556689999999999338999999999 79999999988 889999994 4 89999999999888898 999996
Q ss_pred ---CCHHHHHHHHHHcCCCcceEEEecCCch------hHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCc
Q psy5399 76 ---NDAFVMEAWCRKNNAEGKIRFLADPNLE------FTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTG 145 (156)
Q Consensus 76 ---d~~~~~~~~~~~~~~~~~f~~~~D~~~~------~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~ 145 (156)
++++.+++|+++++++ ||++.|.+.. ++++||+.. .|++|||| +|+|++.+.+.....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~v~~----------~P~~~lid~~G~i~~~~~g~~~~~ 144 (160)
T 3lor_A 77 HDVMTPEALKVFIDEFGIK--FPVAVDMPREGQRIPSTMKKYRLEG----------TPSIILADRKGRIRQVQFGQVDDF 144 (160)
T ss_dssp GGGSCHHHHHHHHHHTTCC--SCEEEECCCTTCSSCHHHHHTTCCS----------SSEEEEECTTSBEEEEEESCCCHH
T ss_pred cccCCHHHHHHHHHHcCCC--CcEEECCccccchhhhHHHhcccCc----------cceEEEECCCCcEEEEecCcCCHH
Confidence 6899999999999999 9999999988 999999842 45589999 999999988765544
Q ss_pred eeecchhhhh
Q psy5399 146 LTCSLVDELK 155 (156)
Q Consensus 146 ~~~~~~~~~l 155 (156)
...+.++.+|
T Consensus 145 ~l~~~i~~ll 154 (160)
T 3lor_A 145 VLGLLLGSLL 154 (160)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444444
No 51
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.95 E-value=5.4e-28 Score=168.27 Aligned_cols=135 Identities=13% Similarity=0.241 Sum_probs=114.2
Q ss_pred cCCCcCCcceeccc--CCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCC-hhhHHHhHHHHHHcCCCEEEEEec-----
Q psy5399 4 QVGDTLPDALLHEN--TPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTH-LPGYLAKEKDLKAKGIHEIFCIAV----- 75 (156)
Q Consensus 4 ~~G~~~P~f~l~~~--~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~-l~~l~~~~~~~~~~~~~~v~~is~----- 75 (156)
.+|+++|+|++. + .+|+++++++ ++||+++|+|| ++|||+|.. + +|.|.+++++|++.++. +++|+.
T Consensus 1 s~g~~aP~f~l~-~~~~~g~~~~l~~-~~gk~vlv~f~-a~wC~~C~~-~~~~~l~~l~~~~~~~~v~-~v~v~~~~~~~ 75 (158)
T 3eyt_A 1 SNAMKAPELQIQ-QWFNSATDLTLAD-LRGKVIVIEAF-QMLCPGCVM-HGIPLAQKVRAAFPEDKVA-VLGLHTVFEHH 75 (158)
T ss_dssp CCCEECCCCCEE-EEESCSSCCCTGG-GTTSEEEEEEE-CTTCHHHHH-THHHHHHHHHHHSCTTTEE-EEEEECCCSCG
T ss_pred CCCCcCCCceeh-hhhcCCCccCHHH-hCCCEEEEEEE-CCcCcchhh-hhhHHHHHHHHHhCcCCEE-EEEEEeccccc
Confidence 369999999999 5 4899999999 79999999988 899999995 5 89999999999878888 999995
Q ss_pred --CCHHHHHHHHHHcCCCcceEEEecCCc-----hhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCcee
Q psy5399 76 --NDAFVMEAWCRKNNAEGKIRFLADPNL-----EFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLT 147 (156)
Q Consensus 76 --d~~~~~~~~~~~~~~~~~f~~~~D~~~-----~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~ 147 (156)
++++.+++|+++++++ ||++.|.+. .+++.||+. ..|++|||| +|+|++.+.+.......
T Consensus 76 ~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~g~~~~~~l 143 (158)
T 3eyt_A 76 EAMTPISLKAFLHEYRIK--FPVGVDQPGDGAMPRTMAAYQMR----------GTPSLLLIDKAGDLRAHHFGDVSELLL 143 (158)
T ss_dssp GGSCHHHHHHHHHHTTCC--SCEEEECCCSSSSCHHHHHTTCC----------SSSEEEEECTTSEEEEEEESCCCHHHH
T ss_pred ccCCHHHHHHHHHHcCCC--ceEEEcCccchhhHHHHHHcCCC----------CCCEEEEECCCCCEEEEEeCCCCHHHH
Confidence 5899999999999999 999999987 699999984 245589998 99999999876544444
Q ss_pred ecchhhhh
Q psy5399 148 CSLVDELK 155 (156)
Q Consensus 148 ~~~~~~~l 155 (156)
.+.++.+|
T Consensus 144 ~~~i~~ll 151 (158)
T 3eyt_A 144 GAEIATLL 151 (158)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 44444443
No 52
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.94 E-value=2.6e-27 Score=162.12 Aligned_cols=117 Identities=6% Similarity=0.009 Sum_probs=105.3
Q ss_pred cCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHH---hHHHHHHcCCCEEEEEecC-CHH
Q psy5399 4 QVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLA---KEKDLKAKGIHEIFCIAVN-DAF 79 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~---~~~~~~~~~~~~v~~is~d-~~~ 79 (156)
++|+++|+|++. +.+|+++++++ ++||+++|+|| ++|||+|.. ++|.|.+ +++++++.++. +++|+.| +++
T Consensus 2 ~~G~~~p~f~l~-~~~g~~~~l~~-~~gk~vll~F~-a~~C~~C~~-~~~~l~~~~~l~~~~~~~~~~-~v~v~~d~~~~ 76 (142)
T 3ewl_A 2 NAGMKAADFTYV-TVHGDNSRMSR-LKAQYTMLFFY-DPDCSNCRK-FEKLFAEIPAFVEMVENGTLR-VLAIYPDENRE 76 (142)
T ss_dssp CTTSBCCCCEEE-CTTCCEEEGGG-CCCSEEEEEEC-CSSCHHHHH-HHHHHHTCHHHHHHHHHTSEE-EEEEECSSCHH
T ss_pred CCCCcCCCCEEE-CCCCCEEEhhh-cCCCEEEEEEE-CCCCccHHH-HHHHHHHhHHHHHHhccCCeE-EEEEEecCCHH
Confidence 689999999999 79999999999 79999999988 999999995 5899998 99999988898 9999988 688
Q ss_pred HHHHHHHHcCCCcceEEEecCCchhHH--hhCCeeeccCCCcceeeeEEEEEe-CCcEEEE
Q psy5399 80 VMEAWCRKNNAEGKIRFLADPNLEFTK--KLGVEHEIPVLGGWRSKRYSMVVD-DGKITQL 137 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~D~~~~~~~--~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~ 137 (156)
..++|+++++++ ||++.|.++.+.. .||+. ..|++||+| +|+|++.
T Consensus 77 ~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 77 EWATKAVYMPQG--WIVGWNKAGDIRTRQLYDIR----------ATPTIYLLDGRKRVILK 125 (142)
T ss_dssp HHHHHHTTSCTT--CEEEECTTCHHHHTTCSCCC----------SSSEEEEECTTCBEEEC
T ss_pred HHHHHHHHcCCC--cceeeCCccchhhHHHcCCC----------CCCeEEEECCCCCEEec
Confidence 899999999998 9999999998876 88884 245599998 9999983
No 53
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.94 E-value=2.9e-27 Score=162.30 Aligned_cols=124 Identities=18% Similarity=0.204 Sum_probs=111.3
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFV 80 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~ 80 (156)
++.+|+++|+|++. +.+|+.+++++ ++||+++|+|| ++|||+|.. ++|.+.+++++|++.++. +++|+.+ +++.
T Consensus 4 ~~~~G~~~p~~~l~-~~~g~~~~l~~-~~gk~vll~f~-~~~C~~C~~-~~~~l~~l~~~~~~~~~~-~v~v~~d~~~~~ 78 (148)
T 3hcz_A 4 PLLLGKKAPNLYMT-DTTGTYRYLYD-VQAKYTILFFW-DSQCGHCQQ-ETPKLYDWWLKNRAKGIQ-VYAANIERKDEE 78 (148)
T ss_dssp CCCTTSBCCCCCCB-CTTSCBCCGGG-CCCSEEEEEEE-CGGGCTTCS-HHHHHHHHHHHHGGGTEE-EEEEECCSSSHH
T ss_pred ccCCCCcCCceEEe-cCCCCEEEhHH-cCCCEEEEEEE-CCCCccHHH-HHHHHHHHHHHhccCCEE-EEEEEecCCHHH
Confidence 57899999999999 79999999999 79999988888 999999995 589999999999988898 9999988 6789
Q ss_pred HHHHHHHcCCCcceEEEecCCch--hHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEcc
Q psy5399 81 MEAWCRKNNAEGKIRFLADPNLE--FTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEP 141 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~~~--~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~ 141 (156)
+++|.++++++. |+++.|+++. +++.||+. ..|+++|+| +|+|++...+.
T Consensus 79 ~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~i~----------~~P~~~lid~~G~i~~~~~g~ 131 (148)
T 3hcz_A 79 WLKFIRSKKIGG-WLNVRDSKNHTDFKITYDIY----------ATPVLYVLDKNKVIIAKRIGY 131 (148)
T ss_dssp HHHHHHHHTCTT-SEEEECTTCCCCHHHHHCCC----------SSCEEEEECTTCBEEEESCCG
T ss_pred HHHHHHHcCCCC-ceEEeccccchhHHHhcCcC----------CCCEEEEECCCCcEEEecCCH
Confidence 999999999876 9999999988 99999984 245589998 99999987654
No 54
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=1.9e-27 Score=164.65 Aligned_cols=121 Identities=19% Similarity=0.179 Sum_probs=109.0
Q ss_pred CccCCCcCCcceecccCCCceeehh--hHhCCCeEEEEEeeCCCCCC--CCcCChhhHHHhHHHH-HHcCCCEEEEEecC
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIA--DAIKGKKVIIFGVPGAFTPG--CSVTHLPGYLAKEKDL-KAKGIHEIFCIAVN 76 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~--~~~~gk~vvl~f~~~~~cp~--C~~~~l~~l~~~~~~~-~~~~~~~v~~is~d 76 (156)
.+++|+++|+|++. +.+|++++++ + ++||+++|+|| ++|||+ |.. ++|.|.+++++| ++.++. +++||.|
T Consensus 4 ~l~~G~~~p~f~l~-~~~g~~~~l~~~~-~~gk~vll~F~-a~~C~~v~C~~-~~~~l~~l~~~~~~~~~~~-~v~v~~d 78 (150)
T 3fw2_A 4 KSEIGKYAPFFSLP-NAKGEKITRSSDA-FKQKSLLINFW-ASWNDSISQKQ-SNSELREIYKKYKKNKYIG-MLGISLD 78 (150)
T ss_dssp TTSTTSBCCCCCEE-BTTCCEECTTSTT-TTTSEEEEEEE-CTTCCCHHHHH-HHHHHHHHHHHHTTCSSEE-EEEEECC
T ss_pred cccCCCcCCccEeE-CCCCCEEecchhh-hCCCEEEEEEE-eCCCCchHHHH-HHHHHHHHHHHhccCCCeE-EEEEEcC
Confidence 47899999999999 7999999999 9 79999999988 899999 996 589999999999 777888 9999998
Q ss_pred C-HHHHHHHHHHcCCCcceEEEecC---CchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEE
Q psy5399 77 D-AFVMEAWCRKNNAEGKIRFLADP---NLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNI 139 (156)
Q Consensus 77 ~-~~~~~~~~~~~~~~~~f~~~~D~---~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~ 139 (156)
+ ++..++|+++++++ |+++.|. +..+++.||+. ..|++|||| +|+|++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 79 VDKQQWKDAIKRDTLD--WEQVCDFGGLNSEVAKQYSIY----------KIPANILLSSDGKILAKNL 134 (150)
T ss_dssp SCHHHHHHHHHHTTCC--SEEECCSCGGGCHHHHHTTCC----------SSSEEEEECTTSBEEEESC
T ss_pred CCHHHHHHHHHHhCCC--ceEEEcCcccchHHHHHcCCC----------ccCeEEEECCCCEEEEccC
Confidence 4 58999999999999 9999998 57999999984 245599998 999999885
No 55
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.94 E-value=6e-27 Score=167.12 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=115.5
Q ss_pred ccCCCcCCcceecccC--CCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCC------CEEEEEe
Q psy5399 3 AQVGDTLPDALLHENT--PQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGI------HEIFCIA 74 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~--~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~------~~v~~is 74 (156)
+.+|+++|+|++. +. +|++++|++ ++||++||+|| ++|||+|+. ++|.|.+++++|+++++ . |++|+
T Consensus 31 ~~~g~~~p~f~l~-~~~~~g~~~~l~~-~~gk~vlv~F~-a~~C~~C~~-~~~~l~~l~~~~~~~~~~~~~~v~-~v~v~ 105 (183)
T 3lwa_A 31 EADRQQLPDIGGD-SLMEEGTQINLSD-FENQVVILNAW-GQWCAPCRS-ESDDLQIIHEELQAAGNGDTPGGT-VLGIN 105 (183)
T ss_dssp GGGCCCCCCCEEE-BSSSTTCEEEGGG-GTTSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHHHCC---CCSEE-EEEEE
T ss_pred cccCCCCCceecc-ccccCCcEecHHH-hCCCEEEEEEE-CCcCHhHHH-HHHHHHHHHHHHHhcCCCccCCcE-EEEEE
Confidence 5789999999999 78 999999999 79999999988 999999996 58999999999999988 8 99999
Q ss_pred cCC--HHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecch
Q psy5399 75 VND--AFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLV 151 (156)
Q Consensus 75 ~d~--~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~ 151 (156)
.++ ++..++|+++++++ ||++.|+++.+.+.||... ....|++|||| +|+|++.+.+........+.+
T Consensus 106 ~d~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~-------v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 176 (183)
T 3lwa_A 106 VRDYSRDIAQDFVTDNGLD--YPSIYDPPFMTAASLGGVP-------ASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVA 176 (183)
T ss_dssp CSCCCHHHHHHHHHHTTCC--SCEEECTTCGGGGGTTTCC-------TTCCSEEEEECTTSCEEEEECSCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCC--ccEEECCcchHHHHhccCC-------CCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHH
Confidence 886 89999999999999 9999999999999997421 12355689998 999999988754433333333
Q ss_pred hhh
Q psy5399 152 DEL 154 (156)
Q Consensus 152 ~~~ 154 (156)
+.+
T Consensus 177 ~~l 179 (183)
T 3lwa_A 177 LPL 179 (183)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 56
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.94 E-value=6.8e-27 Score=167.66 Aligned_cols=145 Identities=9% Similarity=0.086 Sum_probs=110.1
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------ 76 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------ 76 (156)
+++|+++|+|++. +.+|+++++++ ++||+++|+|| ++|||+|.. ++|.|++++++|+++++. |++||.|
T Consensus 23 ~~~g~~~p~f~l~-~~~G~~v~l~~-~~Gk~vlv~F~-atwC~~C~~-~~~~l~~l~~~~~~~~v~-vv~is~d~~~~~~ 97 (185)
T 2gs3_A 23 MRCARSMHEFSAK-DIDGHMVNLDK-YRGFVCIVTNV-ASQGGKTEV-NYTQLVDLHARYAECGLR-ILAFPCNQFGKQE 97 (185)
T ss_dssp GGGCCCGGGCEEE-BTTSCEEEGGG-GTTSEEEEEEE-CSSSTTHHH-HHHHHHHHHHHHGGGTEE-EEEEECCTTTTCC
T ss_pred ccCCCCcCCceeE-cCCCCEeeHHH-cCCCEEEEEEe-cCCCCchHH-HHHHHHHHHHHhhcCCeE-EEEEECcccCCCC
Confidence 6799999999999 79999999999 79998888887 899999995 599999999999988998 9999875
Q ss_pred --CHHHHHHHHHHcCCCcceEEEe--cCCchhHH-hhCCeeec----cCCC-cceeeeEEEEEe-CCcEEEEEEccCCCc
Q psy5399 77 --DAFVMEAWCRKNNAEGKIRFLA--DPNLEFTK-KLGVEHEI----PVLG-GWRSKRYSMVVD-DGKITQLNIEPDGTG 145 (156)
Q Consensus 77 --~~~~~~~~~~~~~~~~~f~~~~--D~~~~~~~-~~gv~~~~----~~~~-~~~~~~~~~iid-~G~I~~~~~~~~~~~ 145 (156)
+++.+++|+++++++ ||++. |.++..+. .|+..... ...+ .....|++|||| +|+|++.+.+.....
T Consensus 98 ~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~ 175 (185)
T 2gs3_A 98 PGSNEEIKEFAAGYNVK--FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPL 175 (185)
T ss_dssp CSCHHHHHHHHHHTTCC--SEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGG
T ss_pred CCCHHHHHHHHHHcCCC--CeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHH
Confidence 578899999999999 99997 55554432 33211000 0001 012245699999 999999987754434
Q ss_pred eeecchhhh
Q psy5399 146 LTCSLVDEL 154 (156)
Q Consensus 146 ~~~~~~~~~ 154 (156)
...+.++++
T Consensus 176 ~l~~~i~~l 184 (185)
T 2gs3_A 176 VIEKDLPHY 184 (185)
T ss_dssp GGGGGHHHH
T ss_pred HHHHHHHHh
Confidence 444444444
No 57
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=6.3e-27 Score=162.07 Aligned_cols=124 Identities=19% Similarity=0.378 Sum_probs=111.2
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC--HH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND--AF 79 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~--~~ 79 (156)
|+++|+++|+|++. +.+|+.+++++ ++||+++|+|| ++|||+|.. .++.|.++++++.+.++. +++|+.+. ++
T Consensus 1 m~~~G~~~p~~~l~-~~~g~~~~l~~-~~gk~vll~f~-~~~C~~C~~-~~~~l~~~~~~~~~~~~~-~v~v~~d~~~~~ 75 (154)
T 3kcm_A 1 MSLEENPAPDFTLN-TLNGEVVKLSD-LKGQVVIVNFW-ATWCPPCRE-EIPSMMRLNAAMAGKPFR-MLCVSIDEGGKV 75 (154)
T ss_dssp --CTTSBCCCCEEE-CTTSCEEEGGG-GTTSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTTSSEE-EEEEECCTTHHH
T ss_pred CCCCCCCCCCeEEE-cCCCCEEehhh-cCCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHhccCCeE-EEEEEcCCcchH
Confidence 56899999999999 79999999999 69999999988 999999996 589999999999887888 99999886 88
Q ss_pred HHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 80 VMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
.+++|+++++++ |+++.|.+..+++.||+.. .|++|||| +|+|++.+.+..
T Consensus 76 ~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~----------~P~~~lid~~G~i~~~~~g~~ 127 (154)
T 3kcm_A 76 AVEEFFRKTGFT--LPVLLDADKRVGKLYGTTG----------VPETFVIDRHGVILKKVVGAM 127 (154)
T ss_dssp HHHHHHHHHCCC--CCEEECTTCHHHHHHTCCS----------BCEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHHHcCCC--eeEEecCchHHHHHhCCCC----------CCeEEEECCCCcEEEEEcCCC
Confidence 899999999999 9999999999999999842 45589998 999999988764
No 58
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.94 E-value=5.3e-27 Score=160.97 Aligned_cols=122 Identities=11% Similarity=0.037 Sum_probs=107.8
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHH---hHHHHHHcCCCEEEEEecCC-
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLA---KEKDLKAKGIHEIFCIAVND- 77 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~---~~~~~~~~~~~~v~~is~d~- 77 (156)
.+.+|+++|+|++. +.+|+.++|++ ++||+++|+|| ++||++|+. ++|.|.+ +++++++.++. |++|+.|+
T Consensus 4 ~~~~G~~ap~f~l~-~~~g~~~~l~~-~~gk~vll~F~-a~wC~~C~~-~~~~l~~~~~l~~~~~~~~~~-vi~i~~d~~ 78 (142)
T 3eur_A 4 KNRLGTKALNFTYT-LDSGVKGTLYQ-FPAEYTLLFIN-NPGCHACAE-MIEGLKASPVINGFTAAKKLK-VLSIYPDEE 78 (142)
T ss_dssp TTCTTSBCCCCEEE-ETTSCEEETTT-CCCSEEEEEEC-CSSSHHHHH-HHHHHHHCHHHHHHHHTTSEE-EEEEECSSC
T ss_pred hhcCCCccCCcEEE-cCCCCEeeHHH-cCCCEEEEEEE-CCCCccHHH-HHHHHhhhHHHHHHhccCCeE-EEEEEcCCC
Confidence 46799999999999 79999999999 79999999988 999999995 5899999 99999988898 99999875
Q ss_pred HHHHHHHHHHcCCCcceEEEecCCch--hHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 78 AFVMEAWCRKNNAEGKIRFLADPNLE--FTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 78 ~~~~~~~~~~~~~~~~f~~~~D~~~~--~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
.+..+++.++++.+ |+.+.|.+.. +++.|++. ..|++|||| +|+|++...+
T Consensus 79 ~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~~ 132 (142)
T 3eur_A 79 LDEWKKHRNDFAKE--WTNGYDKELVIKNKNLYDLR----------AIPTLYLLDKNKTVLLKDAT 132 (142)
T ss_dssp HHHHHHHGGGSCTT--SEEEECTTCHHHHTTCSCCT----------TCSEEEEECTTCBEEEEEEC
T ss_pred HHHHHHHHHhcccc--cccccCccchhhhhhhcCCC----------cCCeEEEECCCCcEEecCCC
Confidence 57888999999998 9999999865 78888884 245599999 9999998764
No 59
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.94 E-value=5.8e-27 Score=167.53 Aligned_cols=146 Identities=9% Similarity=0.073 Sum_probs=110.9
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-----
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN----- 76 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d----- 76 (156)
++++|+++|+|++. +.+|+++++++ ++||++||+|| ++|||+|.. ++|.|.+++++|.++++. |++|+.|
T Consensus 20 ~~~~g~~~p~f~l~-~~~G~~~~l~~-~~gk~vll~F~-atwC~~C~~-~~~~l~~l~~~~~~~~v~-vv~vs~d~~~~~ 94 (183)
T 2obi_A 20 DWRCARSMHEFSAK-DIDGHMVNLDK-YRGFVCIVTNV-ASQCGKTEV-NYTQLVDLHARYAECGLR-ILAFPCNQFGKQ 94 (183)
T ss_dssp CGGGCCSGGGCEEE-BTTSCEEEGGG-GTTSEEEEEEE-CSSSTTHHH-HHHHHHHHHHHHGGGTEE-EEEEECCCSTTC
T ss_pred CCcccCcccceEEE-cCCCCEeeHHH-cCCCEEEEEEe-CCCCCCcHH-HHHHHHHHHHHHhcCCeE-EEEEECCCCCCC
Confidence 57899999999999 79999999999 79999888887 899999995 599999999999988898 9999975
Q ss_pred ---CHHHHHHHHHHcCCCcceEEEe--cCCchhHH-hhCCeeec----cCCCc-ceeeeEEEEEe-CCcEEEEEEccCCC
Q psy5399 77 ---DAFVMEAWCRKNNAEGKIRFLA--DPNLEFTK-KLGVEHEI----PVLGG-WRSKRYSMVVD-DGKITQLNIEPDGT 144 (156)
Q Consensus 77 ---~~~~~~~~~~~~~~~~~f~~~~--D~~~~~~~-~~gv~~~~----~~~~~-~~~~~~~~iid-~G~I~~~~~~~~~~ 144 (156)
+++.+++|+++++++ ||++. |.++..+. .|+..... ...+. ....|++|||| +|+|++.+.+....
T Consensus 95 e~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~ 172 (183)
T 2obi_A 95 EPGSNEEIKEFAAGYNVK--FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEP 172 (183)
T ss_dssp CCSCHHHHHHHHHTTTCC--SEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCT
T ss_pred CCCCHHHHHHHHHHcCCC--ceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCH
Confidence 688999999999999 99997 76665443 23211100 00010 12235699999 99999998765443
Q ss_pred ceeecchhhh
Q psy5399 145 GLTCSLVDEL 154 (156)
Q Consensus 145 ~~~~~~~~~~ 154 (156)
....+.++++
T Consensus 173 ~~l~~~i~~l 182 (183)
T 2obi_A 173 LVIEKDLPHY 182 (183)
T ss_dssp HHHHTTSGGG
T ss_pred HHHHHHHHHh
Confidence 3333344433
No 60
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.94 E-value=9e-27 Score=166.87 Aligned_cols=119 Identities=13% Similarity=0.128 Sum_probs=108.3
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec------
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV------ 75 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~------ 75 (156)
++++|+++|+|++. +.+|+.++|++ ++||++||+|| ++||++|.. +++.|.+++++|.++ +. +++|+.
T Consensus 6 ~~~~g~~~p~f~l~-~~~G~~~~l~~-~~gk~vlv~F~-a~~C~~C~~-~~~~l~~l~~~~~~~-~~-~v~v~~d~~~~~ 79 (188)
T 2cvb_A 6 ELPLESPLIDAELP-DPRGGRYRLSQ-FHEPLLAVVFM-CNHCPYVKG-SIGELVALAERYRGK-VA-FVGINANDYEKY 79 (188)
T ss_dssp CCCTTCBCCCCEEE-CTTSCEEEGGG-CCSSEEEEEEE-CSSCHHHHT-THHHHHHHHHHTTTT-EE-EEEEECCCTTTC
T ss_pred cCCCCCCCCCceee-cCCCCEEeHHH-hCCCEEEEEEE-CCCCccHHH-HHHHHHHHHHHhhcC-eE-EEEEEcCccccc
Confidence 57899999999999 79999999999 79999999988 999999995 699999999999877 77 999998
Q ss_pred --CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEE
Q psy5399 76 --NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLN 138 (156)
Q Consensus 76 --d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~ 138 (156)
++.+.+++|+++++++ ||++.|.+..+++.||+.. .|++|||| +|+|++..
T Consensus 80 ~~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~----------~P~~~lid~~G~i~~~g 133 (188)
T 2cvb_A 80 PEDAPEKMAAFAEEHGIF--FPYLLDETQEVAKAYRALR----------TPEVFLFDERRLLRYHG 133 (188)
T ss_dssp GGGSHHHHHHHHHHHTCC--SCEEECSSSHHHHHTTCCE----------ESEEEEECTTCBEEEEE
T ss_pred cccCHHHHHHHHHHhCCC--ceEEECCcchHHHHcCCCC----------CCeEEEECCCCcEEEEE
Confidence 6789999999999998 9999999999999999842 55689998 99999983
No 61
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=1.2e-26 Score=160.49 Aligned_cols=136 Identities=17% Similarity=0.272 Sum_probs=113.9
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEe--cCCHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIA--VNDAF 79 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is--~d~~~ 79 (156)
|..+|+++|+|++. +.+|+.+++++ ++||+++|+|| ++|||+|.. .++.+.++++++.+.++. +++|+ .++.+
T Consensus 1 m~~~G~~~p~~~l~-~~~g~~~~l~~-~~gk~~lv~f~-~~~C~~C~~-~~~~l~~l~~~~~~~~~~-vv~v~~~~~~~~ 75 (153)
T 2l5o_A 1 MSLDSKTAPAFSLP-DLHGKTVSNAD-LQGKVTLINFW-FPSCPGCVS-EMPKIIKTANDYKNKNFQ-VLAVAQPIDPIE 75 (153)
T ss_dssp ---CCTTCCSCEEE-CTTSCEEEHHH-HTTCEEEEEEE-CTTCTTHHH-HHHHHHHHHHHGGGTTEE-EEEEECTTSCHH
T ss_pred CCCCCCCCCCcEee-cCCCCCccHHH-hCCCEEEEEEE-CCCCccHHH-HHHHHHHHHHHhccCCeE-EEEEecCCCCHH
Confidence 35689999999999 79999999999 69999999888 999999996 589999999999988888 99999 56889
Q ss_pred HHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecchhhh
Q psy5399 80 VMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLVDEL 154 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~~~~ 154 (156)
.+++|+++++++ |+++.|.+..+++.||+.. .|+++|+| +|+|++.+.+........+.++++
T Consensus 76 ~~~~~~~~~~~~--~~~~~d~~~~~~~~~~i~~----------~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 76 SVRQYVKDYGLP--FTVMYDADKAVGQAFGTQV----------YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp HHHHHHHHTTCC--SEEEECSSCHHHHHHTCCS----------SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC--ceEEcCchHHHHHHcCCCc----------cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 999999999999 9999999999999999842 45589998 999999888754433333344433
No 62
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.94 E-value=1e-26 Score=160.79 Aligned_cols=123 Identities=18% Similarity=0.375 Sum_probs=109.6
Q ss_pred cCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHHHH
Q psy5399 4 QVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFVME 82 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~ 82 (156)
++|+++|+|++. +.+|+.+++++ ++||+++|+|| ++|||+|.. .+|.|.++++++.+.++. +++|+.+ +++.++
T Consensus 1 ~~G~~~p~~~l~-~~~g~~~~l~~-~~gk~vlv~F~-~~~C~~C~~-~~~~l~~~~~~~~~~~v~-vv~v~~d~~~~~~~ 75 (151)
T 2f9s_A 1 SEGSDAPNFVLE-DTNGKRIELSD-LKGKGVFLNFW-GTWCEPCKK-EFPYMANQYKHFKSQGVE-IVAVNVGESKIAVH 75 (151)
T ss_dssp -CCEECCCCEEE-CTTCCEEEGGG-GTTSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHGGGTEE-EEEEEESCCHHHHH
T ss_pred CCCCcCCcceeE-cCCCCEEEHHH-cCCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHhccCCeE-EEEEECCCCHHHHH
Confidence 479999999999 79999999999 69999999988 999999996 589999999999888888 9999985 678999
Q ss_pred HHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 83 AWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 83 ~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
+|+++++++ |+++.|.+..+++.||+. ..|++||+| +|+|++.+.+...
T Consensus 76 ~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~G~~~ 125 (151)
T 2f9s_A 76 NFMKSYGVN--FPVVLDTDRQVLDAYDVS----------PLPTTFLINPEGKVVKVVTGTMT 125 (151)
T ss_dssp HHHHHHTCC--SCEEEETTSHHHHHTTCC----------SSCEEEEECTTSEEEEEEESCCC
T ss_pred HHHHHcCCC--ceEEECCchHHHHhcCCC----------CCCeEEEECCCCcEEEEEeCCCC
Confidence 999999998 999999999999999984 245589998 9999999886543
No 63
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.94 E-value=1.5e-26 Score=162.44 Aligned_cols=140 Identities=11% Similarity=0.120 Sum_probs=109.4
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------ 76 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------ 76 (156)
+++|+++|+|++. +.+|+++++++ ++||+++|+|| ++|||+|.. ++|.|++++++|+++++. |++|+.|
T Consensus 5 ~~~g~~~p~f~l~-~~~G~~~~l~~-~~gk~vlv~f~-a~~C~~C~~-~~~~l~~l~~~~~~~~~~-vv~v~~d~~~~~~ 79 (169)
T 2v1m_A 5 HKSWNSIYEFTVK-DINGVDVSLEK-YRGHVCLIVNV-ACKCGATDK-NYRQLQEMHTRLVGKGLR-ILAFPCNQFGGQE 79 (169)
T ss_dssp --CCCSGGGCEEE-BTTSCEEEGGG-GTTSEEEEEEE-CSSSTTHHH-HHHHHHHHHHHHGGGTEE-EEEEECCCSTTCC
T ss_pred ccCCcccccceee-cCCCCCccHHH-cCCCEEEEEEe-eccCCchHH-HHHHHHHHHHHhhcCCeE-EEEEECCccCCCC
Confidence 5799999999999 79999999999 79999999988 799999995 599999999999988898 9999975
Q ss_pred --CHHHHHHH-HHHcCCCcceEEEe--cCCchhHH-hh--------CCeeeccCCCc-ceeeeEEEEEe-CCcEEEEEEc
Q psy5399 77 --DAFVMEAW-CRKNNAEGKIRFLA--DPNLEFTK-KL--------GVEHEIPVLGG-WRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 77 --~~~~~~~~-~~~~~~~~~f~~~~--D~~~~~~~-~~--------gv~~~~~~~~~-~~~~~~~~iid-~G~I~~~~~~ 140 (156)
+++.+++| .++++++ ||++. |.++..+. .| |+. +. ....|++|||| +|+|++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~l~~~~~~~~------~~~i~~~P~~~lid~~G~i~~~~~g 151 (169)
T 2v1m_A 80 PWAEAEIKKFVTEKYGVQ--FDMFSKIKVNGSDADDLYKFLKSRQHGTL------TNNIKWNFSKFLVDRQGQPVKRYSP 151 (169)
T ss_dssp CSCHHHHHHHHHHHHCCC--SEEBCCCCCSSTTSCHHHHHHHHHSCCSS------SCSCCSTTCEEEECTTSCEEEEECT
T ss_pred CCCHHHHHHHHHHhcCCC--CceEEEEeecCccccHHHHHHHhhcCCcc------CCcccccceEEEECCCCCEEEEcCC
Confidence 57889999 5999999 99996 77665543 23 432 10 12235599999 9999999877
Q ss_pred cCCCceeecchhhhh
Q psy5399 141 PDGTGLTCSLVDELK 155 (156)
Q Consensus 141 ~~~~~~~~~~~~~~l 155 (156)
........+.++++|
T Consensus 152 ~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 152 TTAPYDIEGDIMELL 166 (169)
T ss_dssp TSCGGGGHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 544344444444443
No 64
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.94 E-value=1.9e-26 Score=164.20 Aligned_cols=132 Identities=20% Similarity=0.317 Sum_probs=111.5
Q ss_pred CccCCCcCCcceecccCCC--ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEe-cCCH
Q psy5399 2 CAQVGDTLPDALLHENTPQ--TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIA-VNDA 78 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is-~d~~ 78 (156)
.+.+|+++|+|++. +.+| +.+++++ ++||++||+|| ++|||+|.. ++|.|.+++++ ++. |++|+ .+++
T Consensus 29 ~~~~G~~~P~f~l~-~~~g~~~~~~l~~-~~gk~vll~F~-a~~C~~C~~-~~~~l~~l~~~----~v~-vv~vs~~d~~ 99 (176)
T 3kh7_A 29 SALIGKPFPAFDLP-SVQDPARRLTEAD-LKGKPALVNVW-GTWCPSCRV-EHPELTRLAEQ----GVV-IYGINYKDDN 99 (176)
T ss_dssp TTTTTSBCCCCEEE-BSSCTTSEEEGGG-GCSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHT----TCE-EEEEEESCCH
T ss_pred ccccCCcCCCcEec-ccCCCCceecHHH-hCCCEEEEEEE-CCcCHHHHH-HHHHHHHHHHC----CCE-EEEEeCCCCH
Confidence 47899999999999 7998 8999999 79999999988 999999996 58999988865 788 99999 4789
Q ss_pred HHHHHHHHHcCCCcceE-EEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecchhhh
Q psy5399 79 FVMEAWCRKNNAEGKIR-FLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLVDEL 154 (156)
Q Consensus 79 ~~~~~~~~~~~~~~~f~-~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~~~~ 154 (156)
+..++|+++++++ |+ ++.|.+..++++||+.. .|++|||| +|+|++.+.+........+.++++
T Consensus 100 ~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~----------~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 100 AAAIKWLNELHNP--YLLSISDADGTLGLDLGVYG----------APETYLIDKQGIIRHKIVGVVDQKVWREQLAPL 165 (176)
T ss_dssp HHHHHHHHHTTCC--CSEEEEETTCHHHHHHTCCS----------SCEEEEECTTCBEEEEEESCCCHHHHHHHTHHH
T ss_pred HHHHHHHHHcCCC--CceEEECCcchHHHHcCCCC----------CCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 9999999999999 77 68999999999999942 45589999 999999988765444444444443
No 65
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.93 E-value=4e-27 Score=168.31 Aligned_cols=139 Identities=12% Similarity=0.125 Sum_probs=105.5
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------ 76 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------ 76 (156)
+++|+++|+|++. +.+|+++++++ ++||++||+|| ++|||+|.. ++|.|++++++|+++++. |++||.|
T Consensus 23 ~~~g~~~p~f~l~-~~~G~~~~l~~-~~Gk~vlv~F~-atwC~~C~~-~~p~l~~l~~~~~~~~v~-vv~vs~d~~~~~e 97 (181)
T 2p31_A 23 MQQEQDFYDFKAV-NIRGKLVSLEK-YRGSVSLVVNV-ASECGFTDQ-HYRALQQLQRDLGPHHFN-VLAFPCNQFGQQE 97 (181)
T ss_dssp ----CCGGGCEEE-BTTSCEEEGGG-GTTSEEEEEEE-CSSSTTHHH-HHHHHHHHHHHHGGGTEE-EEEEECCCSTTCC
T ss_pred CCcCCccCceEee-cCCCCEecHHH-cCCCEEEEEEe-ccCCCCcHH-HHHHHHHHHHHhhcCCEE-EEEEECcCCCCCC
Confidence 6799999999999 79999999999 79998888887 899999996 599999999999988898 9999975
Q ss_pred --CHHHHHHHHHH-cCCCcceEEEec--CCchhHH---hhCCeeeccCCCcceeee----EEEEEe-CCcEEEEEEccCC
Q psy5399 77 --DAFVMEAWCRK-NNAEGKIRFLAD--PNLEFTK---KLGVEHEIPVLGGWRSKR----YSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 77 --~~~~~~~~~~~-~~~~~~f~~~~D--~~~~~~~---~~gv~~~~~~~~~~~~~~----~~~iid-~G~I~~~~~~~~~ 143 (156)
+++.+++|+++ ++++ ||++.| .++..+. .|++.. .+..+ ++|||| +|+|++.+.+...
T Consensus 98 ~~~~~~~~~~~~~~~~~~--~p~~~~~d~~g~~~~~~~~~~~~~-------~P~~~~~~~~~~lid~~G~i~~~~~g~~~ 168 (181)
T 2p31_A 98 PDSNKEIESFARRTYSVS--FPMFSKIAVTGTGAHPAFKYLAQT-------SGKEPTWNFWKYLVAPDGKVVGAWDPTVS 168 (181)
T ss_dssp CSCHHHHHHHHHHHHCCC--SCBBCCCCCSSTTSCHHHHHHHHH-------HSCCCCSTTCEEEECTTSCEEEEECTTSC
T ss_pred CCCHHHHHHHHHhhcCCC--ceeEeecccCCccchhhhhhhhhc-------CCCccccceeEEEEcCCCCEEEEeCCCCC
Confidence 68899999999 9998 999964 4443322 233321 11011 589999 9999999876544
Q ss_pred Cceeecchhhhh
Q psy5399 144 TGLTCSLVDELK 155 (156)
Q Consensus 144 ~~~~~~~~~~~l 155 (156)
.....+.++++|
T Consensus 169 ~~~l~~~i~~ll 180 (181)
T 2p31_A 169 VEEVRPQITALV 180 (181)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHh
Confidence 334444555554
No 66
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.93 E-value=2.7e-26 Score=165.12 Aligned_cols=122 Identities=16% Similarity=0.152 Sum_probs=108.8
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCe-EEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec------
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKK-VIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV------ 75 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~-vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~------ 75 (156)
+++|+++|+|++.++.+|+++++++ ++|++ +||+|| ++||++|.. ++|.|.+++++|.++++. +++|+.
T Consensus 18 ~~~g~~~p~f~l~~~~~G~~~~l~~-~~gk~~vlv~F~-a~~C~~C~~-~~~~l~~l~~~~~~~~v~-vv~v~~d~~~~~ 93 (196)
T 2ywi_A 18 FPLGKQAPPFALTNVIDGNVVRLED-VKSDAATVIMFI-CNHCPFVKH-VQHELVRLANDYMPKGVS-FVAINSNDAEQY 93 (196)
T ss_dssp CCTTCBCCCCEEEETTTCCEEEHHH-HCCSSEEEEEEC-CSSCHHHHH-HHHHHHHHHHHHGGGTCE-EEEEECSCTTTC
T ss_pred CCcCCcCCceeeeecCCCCEEeHHH-hCCCCeEEEEEe-CCCCccHHH-HHHHHHHHHHHHHhCCcE-EEEEECCccccc
Confidence 6899999999998238999999999 79986 777776 999999995 589999999999988898 999998
Q ss_pred --CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 76 --NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 76 --d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
++++.+++|+++++++ ||++.|.+..++++||+. ..|++|||| +|+|++....
T Consensus 94 ~~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~~ 149 (196)
T 2ywi_A 94 PEDSPENMKKVAEELGYP--FPYLYDETQEVAKAYDAA----------CTPDFYIFDRDLKCVYRGQL 149 (196)
T ss_dssp GGGSHHHHHHHHHHHTCC--SCEEECSSCHHHHHHTCC----------EESEEEEEETTCBEEEEECS
T ss_pred cccCHHHHHHHHHHcCCC--ceEEECCchHHHHHhCCC----------CCCeEEEEcCCCeEEEcccc
Confidence 6789999999999998 999999999999999984 256689999 9999999653
No 67
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.93 E-value=4.2e-26 Score=157.58 Aligned_cols=125 Identities=21% Similarity=0.315 Sum_probs=110.2
Q ss_pred CCccCCCcCC-cceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC-H
Q psy5399 1 MCAQVGDTLP-DALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND-A 78 (156)
Q Consensus 1 m~l~~G~~~P-~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~-~ 78 (156)
|.+++|+++| +|++. +.+|+.+++++ ++||+++|+|| ++|||+|.. .++.+.++++++.+.++. +++|+.++ .
T Consensus 1 m~l~~G~~~p~~f~l~-~~~g~~~~l~~-~~gk~~lv~f~-~~~C~~C~~-~~~~l~~l~~~~~~~~~~-~v~v~~d~~~ 75 (152)
T 2lja_A 1 MSLRSGNPSAASFSYP-DINGKTVSLAD-LKGKYIYIDVW-ATWCGPCRG-ELPALKELEEKYAGKDIH-FVSLSCDKNK 75 (152)
T ss_dssp CCTTTTCCCSSSCEEE-ETTTEEEESTT-TTTSEEEEEEC-CSSCCGGGG-THHHHHHHHHHSTTSSEE-EEEEECCSCH
T ss_pred CccccCCCCCcccEee-cCCCCEeeHHH-cCCCEEEEEEE-CCcCHhHHH-HhHHHHHHHHHhccCCeE-EEEEEccCcH
Confidence 8899999999 99999 79999999999 79999999888 999999995 589999999999887888 99999874 6
Q ss_pred HHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEcc
Q psy5399 79 FVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEP 141 (156)
Q Consensus 79 ~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~ 141 (156)
+..++|+++++++. ++++.|.+..++++||+.. .|+++|+| +|+|++...+.
T Consensus 76 ~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~v~~----------~P~~~lid~~G~i~~~~~g~ 128 (152)
T 2lja_A 76 KAWENMVTKDQLKG-IQLHMGTDRTFMDAYLING----------IPRFILLDRDGKIISANMTR 128 (152)
T ss_dssp HHHHHHHHHHTCCS-EEEECSSCTHHHHHTTCCS----------SCCEEEECTTSCEEESSCCC
T ss_pred HHHHHHHHhcCCCC-ceeecCcchhHHHHcCcCC----------CCEEEEECCCCeEEEccCCC
Confidence 78899999999985 6788999899999999842 44589999 99999986553
No 68
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.93 E-value=9e-28 Score=165.00 Aligned_cols=121 Identities=12% Similarity=0.168 Sum_probs=102.7
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFV 80 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~ 80 (156)
.+++|+++|+|++ + .+|++++|++ ++||+++|+|| ++||++|.. ++|.|.+++++|++.++. |++||.| +.+.
T Consensus 6 ~l~~G~~~P~f~l-~-~~g~~~~l~~-~~gk~vll~F~-a~wC~~C~~-~~~~l~~l~~~~~~~~~~-vv~vs~d~~~~~ 79 (143)
T 4fo5_A 6 GVNPGDLAPRIEF-L-GNDAKASFHN-QLGRYTLLNFW-AAYDAESRA-RNVQLANEVNKFGPDKIA-MCSISMDEKESI 79 (143)
T ss_dssp SSSTTSBCCCCCC-------CCCSCC-SSCCEEEEEEE-CTTCHHHHH-HHHHHHHHHTTSCTTTEE-EEEEECCSCHHH
T ss_pred ccCCcccCCceEE-c-CCCCEEEHHH-hCCCEEEEEEE-cCcCHHHHH-HHHHHHHHHHHhCcCCEE-EEEEEccCCHHH
Confidence 3789999999999 4 8999999999 79999888887 999999996 589999999999888898 9999998 6788
Q ss_pred HHHHHHHcCCCcce-EEEecCC---chhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 81 MEAWCRKNNAEGKI-RFLADPN---LEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 81 ~~~~~~~~~~~~~f-~~~~D~~---~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
.++++++++++ | ++++|.. ..+++.||+. ..|++|||| +|+|++...+
T Consensus 80 ~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~~ 132 (143)
T 4fo5_A 80 FTETVKIDKLD--LSTQFHEGLGKESELYKKYDLR----------KGFKNFLINDEGVIIAANVT 132 (143)
T ss_dssp HHHHHHHHTCC--GGGEEECTTGGGSHHHHHTTGG----------GCCCEEEECTTSBEEEESCC
T ss_pred HHHHHHHhCCC--CceeeecccccchHHHHHcCCC----------CCCcEEEECCCCEEEEccCC
Confidence 99999999999 9 8999985 5789999984 245589999 9999998654
No 69
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.93 E-value=1.1e-26 Score=165.95 Aligned_cols=129 Identities=15% Similarity=0.231 Sum_probs=111.4
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC--HH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND--AF 79 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~--~~ 79 (156)
++.+|+++|+|++. +.+|+++++++ ++||+++|+|| ++||++|.. +++.|.+++++|.+.++. |++|+.|. ++
T Consensus 33 ~~~~g~~~p~f~l~-~~~G~~~~l~~-~~gk~vll~F~-a~~C~~C~~-~~~~l~~l~~~~~~~~~~-vv~v~~d~~~~~ 107 (186)
T 1jfu_A 33 MASAPLKLPDLAFE-DADGKPKKLSD-FRGKTLLVNLW-ATWCVPCRK-EMPALDELQGKLSGPNFE-VVAINIDTRDPE 107 (186)
T ss_dssp ECCSCCBCCCCEEE-CTTSCEEEGGG-GTTSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHCBTTEE-EEEEECCCSCTT
T ss_pred cccCCCcCCCcEeE-cCCCCEeeHHH-cCCCEEEEEEE-eCCCHhHHH-HHHHHHHHHHHhccCCcE-EEEEECCCCCHH
Confidence 46789999999999 79999999999 79999999988 999999996 589999999999877888 99999885 47
Q ss_pred HHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 80 VMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
.+++|+++++++. |+++.|++..+++.|++... ....|++|||| +|+|++.+.+..
T Consensus 108 ~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~------~~~~P~~~lid~~G~i~~~~~g~~ 164 (186)
T 1jfu_A 108 KPKTFLKEANLTR-LGYFNDQKAKVFQDLKAIGR------ALGMPTSVLVDPQGCEIATIAGPA 164 (186)
T ss_dssp HHHHHHHHTTCCT-TCCEECTTCHHHHHHHTTTC------CSSSSEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHHHcCCCC-CceEECCcchHHHHhccccc------cCCCCEEEEECCCCCEEEEEecCC
Confidence 8899999999843 99999999999999998521 01245699999 999999988754
No 70
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.93 E-value=2.2e-26 Score=157.85 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=108.2
Q ss_pred CccCCCcCCcceecccCCCceeehh--hHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHH-HHcCCCEEEEEecC-C
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIA--DAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDL-KAKGIHEIFCIAVN-D 77 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~--~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~-~~~~~~~v~~is~d-~ 77 (156)
.+++|+++|+|++. +.+|+.++++ + ++||+++|+|| ++|||+|.. .+|.+.+++++| .+.++. +++|+.| +
T Consensus 4 ~~~~g~~~p~~~l~-~~~g~~~~l~~~~-~~gk~vll~F~-~~~C~~C~~-~~~~l~~l~~~~~~~~~~~-~v~v~~d~~ 78 (148)
T 3fkf_A 4 KVTVGKSAPYFSLP-NEKGEKLSRSAER-FRNRYLLLNFW-ASWCDPQPE-ANAELKRLNKEYKKNKNFA-MLGISLDID 78 (148)
T ss_dssp -CCTTSBCCCCCEE-BTTSCEECTTSTT-TTTSEEEEEEE-CGGGCCCHH-HHHHHHHHHHHTTTCTTEE-EEEEECCSC
T ss_pred cccCCCcCCCeEee-CCCCCEEeccccc-cCCcEEEEEEE-CCCCHHHHH-HhHHHHHHHHHhcCCCCeE-EEEEECCCC
Confidence 47899999999999 7999999999 9 79999999988 999999996 589999999999 777888 9999987 5
Q ss_pred HHHHHHHHHHcCCCcceEEEecC---CchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEE
Q psy5399 78 AFVMEAWCRKNNAEGKIRFLADP---NLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNI 139 (156)
Q Consensus 78 ~~~~~~~~~~~~~~~~f~~~~D~---~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~ 139 (156)
.+..+++.++++++ |+++.|. +..++++||+. ..|+++|+| +|+|++...
T Consensus 79 ~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 79 REAWETAIKKDTLS--WDQVCDFTGLSSETAKQYAIL----------TLPTNILLSPTGKILARDI 132 (148)
T ss_dssp HHHHHHHHHHTTCC--SEEECCSCGGGCHHHHHTTCC----------SSSEEEEECTTSBEEEESC
T ss_pred HHHHHHHHHHcCCC--ceEEEccCCcchHHHHhcCCC----------CcCEEEEECCCCeEEEecC
Confidence 77899999999998 9999998 67999999984 245589998 999999876
No 71
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.93 E-value=2.7e-26 Score=161.26 Aligned_cols=142 Identities=13% Similarity=0.162 Sum_probs=107.6
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-----
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN----- 76 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d----- 76 (156)
.+++|+++|+|++. +.+|+++++++ ++||+++|+|| ++|||+|.. ++|.|++++++|+++++. |++||.|
T Consensus 5 ~~~~g~~~p~f~l~-~~~g~~~~l~~-~~gk~vll~f~-a~~C~~C~~-~~~~l~~l~~~~~~~~~~-vv~vs~d~~~~~ 79 (170)
T 2p5q_A 5 TSKNPESVHDFTVK-DAKENDVDLSI-FKGKVLLIVNV-ASKCGMTNS-NYAEMNQLYEKYKDQGLE-ILAFPCNQFGEE 79 (170)
T ss_dssp -----CCGGGCEEE-BTTSCEEEGGG-GTTSEEEEEEE-CSSSTTHHH-HHHHHHHHHHHHGGGTEE-EEEEECCTTTTC
T ss_pred cCCCCccccceEEE-cCCCCEecHHH-hCCCEEEEEEE-eccCCccHH-HHHHHHHHHHHhccCCEE-EEEEECCCCCCC
Confidence 36799999999999 79999999999 79999999888 799999995 599999999999988898 9999974
Q ss_pred ---CHHHHHHHHH-HcCCCcceEEE--ecCCchhHH-h--------hCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 77 ---DAFVMEAWCR-KNNAEGKIRFL--ADPNLEFTK-K--------LGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 77 ---~~~~~~~~~~-~~~~~~~f~~~--~D~~~~~~~-~--------~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
+++.+++|++ +++++ ||++ .|.++..+. . +|+.. ...+..|++|||| +|+|++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~-----~~~p~~~~~~lid~~G~i~~~~~g 152 (170)
T 2p5q_A 80 EPGTNDQITDFVCTRFKSE--FPIFDKIDVNGENASPLYRFLKLGKWGIFG-----DDIQWNFAKFLVNKDGQVVDRYYP 152 (170)
T ss_dssp CCSCHHHHHHHHHHHTCCC--SCBBCCCBSSSTTBCHHHHHHHTHHHHTTC-----SCCCSTTCEEEECTTSCEEEEECT
T ss_pred CCCCHHHHHHHHHHhcCCC--ceeEeeeccCCCchHHHHHHHHhcCCCccC-----CcccccccEEEECCCCCEEEeeCC
Confidence 6889999999 78998 9999 677765542 2 24311 1123122589999 9999999877
Q ss_pred cCCCceeecchhhhh
Q psy5399 141 PDGTGLTCSLVDELK 155 (156)
Q Consensus 141 ~~~~~~~~~~~~~~l 155 (156)
........+.++++|
T Consensus 153 ~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 153 TTSPLSLERDIKQLL 167 (170)
T ss_dssp TSCGGGGHHHHHHHT
T ss_pred CCCHHHHHHHHHHHh
Confidence 544344444555554
No 72
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.93 E-value=5.5e-25 Score=158.29 Aligned_cols=155 Identities=32% Similarity=0.592 Sum_probs=129.7
Q ss_pred CCccCCCcCCc--cee--cc----cC------CCceeehhhHh-CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHH-HH
Q psy5399 1 MCAQVGDTLPD--ALL--HE----NT------PQTKIQIADAI-KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDL-KA 64 (156)
Q Consensus 1 m~l~~G~~~P~--f~l--~~----~~------~g~~~~l~~~~-~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~-~~ 64 (156)
|...+|+++|. +++ .. +. .-+++++++.+ +||+|||+++||+++|.|..+|+|.+.+.++++ ++
T Consensus 24 ~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~ 103 (199)
T 4h86_A 24 MSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKE 103 (199)
T ss_dssp BCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHH
T ss_pred hHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHh
Confidence 55789999996 332 10 11 23578898855 799999999999999999988999999999876 78
Q ss_pred cCCCEEEEEecCCHHHHHHHHHHcCCCc--ceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 65 KGIHEIFCIAVNDAFVMEAWCRKNNAEG--KIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 65 ~~~~~v~~is~d~~~~~~~~~~~~~~~~--~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+|+++|++||.|++..+++|.+..+... ++++++|+++.+++++|+..+.. .|..++.|+.+|||||+|.+++++++
T Consensus 104 kGvd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~-~gg~RS~Rya~IVdDGvV~~~~vE~~ 182 (199)
T 4h86_A 104 KEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVG-DGVYWSGRWAMVVENGIVTYAAKETN 182 (199)
T ss_dssp SCCCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEE-TTEEEECSEEEEEETTEEEEEEECSS
T ss_pred cCCcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecC-CCcceeeEEEEEEECCEEEEEEEeCC
Confidence 9998899999999999999999987642 49999999999999999987643 34567899999999999999999987
Q ss_pred C-CceeecchhhhhC
Q psy5399 143 G-TGLTCSLVDELKL 156 (156)
Q Consensus 143 ~-~~~~~~~~~~~l~ 156 (156)
+ ..-+++.+|.+|.
T Consensus 183 pg~~~~vS~ae~vL~ 197 (199)
T 4h86_A 183 PGTDVTVSSVESVLA 197 (199)
T ss_dssp TTTCCSTTSHHHHHT
T ss_pred CCCCCcccCHHHHHh
Confidence 5 4578999999884
No 73
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.93 E-value=9.6e-27 Score=167.20 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=108.9
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------ 76 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------ 76 (156)
+..+.++|+|++. +.+|++++|++ ++||++||+|| ++|||+|.. ++|.|++++++|+++++. |++||.|
T Consensus 20 ~~~~~~~p~f~l~-d~~G~~~~l~~-~~Gk~vlv~F~-atwC~~C~~-~~p~l~~l~~~~~~~~~~-vi~is~d~~~~~e 94 (187)
T 3dwv_A 20 MSAASSIFDFEVL-DADHKPYNLVQ-HKGSPLLIYNV-ASKCGYTKG-GYETATTLYNKYKSQGFT-VLAFPSNQFGGQE 94 (187)
T ss_dssp CTTCCSGGGSCCB-BTTSCBCCGGG-GTTSCEEEEEE-CCBCSCCTT-HHHHHHHHHHHHGGGTCE-EEEEEBCCCSSCS
T ss_pred hcCCCccCCeEEE-cCCCCEeeHHH-hCCCEEEEEEe-cCCCCCcHH-HHHHHHHHHHHhhhCCeE-EEEEECcccCCCC
Confidence 6788999999999 79999999999 79999999887 999999995 699999999999999999 9999976
Q ss_pred --CHHHHHHHHHH-cCCCcceEEEe--cCCchhHH-hh--------CCeeeccCCCcceeee---EEEEEe-CCcEEEEE
Q psy5399 77 --DAFVMEAWCRK-NNAEGKIRFLA--DPNLEFTK-KL--------GVEHEIPVLGGWRSKR---YSMVVD-DGKITQLN 138 (156)
Q Consensus 77 --~~~~~~~~~~~-~~~~~~f~~~~--D~~~~~~~-~~--------gv~~~~~~~~~~~~~~---~~~iid-~G~I~~~~ 138 (156)
+++++++|+++ ++++ ||++. |.++..+. .| ++. | .+..| ++|||| +|+|++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~l~~~~~~~~------~-~~~iP~~~~~~liD~~G~i~~~~ 165 (187)
T 3dwv_A 95 PGNEEEIKEFVCTKFKAE--FPIMAKINVNGENAHPLYEYMKKTKPGIL------A-TKAIKWNFTSFLIDRDGVPVERF 165 (187)
T ss_dssp SSBTTHHHHSCCBCCCCS--SCBBCCBCCSCC-CCHHHHHHHHHSCCSB------S-SSSCCSTTCEEEECTTSCEEEEE
T ss_pred CCCHHHHHHHHHhccCCC--CceeeccccCCcchhHHHHHHHhhcCCcc------C-CCccccceeEEEECCCCCEEEEE
Confidence 57888999884 5988 99997 55544332 12 222 1 12344 699999 99999998
Q ss_pred EccCCCceeecchhhhh
Q psy5399 139 IEPDGTGLTCSLVDELK 155 (156)
Q Consensus 139 ~~~~~~~~~~~~~~~~l 155 (156)
.+........+.++++|
T Consensus 166 ~g~~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 166 SPGASVKDIEEKLIPLL 182 (187)
T ss_dssp CTTCCHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 87654444445555554
No 74
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.93 E-value=4.9e-26 Score=155.96 Aligned_cols=135 Identities=11% Similarity=0.117 Sum_probs=113.9
Q ss_pred ccCCCcCCccee--cccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC----
Q psy5399 3 AQVGDTLPDALL--HENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN---- 76 (156)
Q Consensus 3 l~~G~~~P~f~l--~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d---- 76 (156)
+++|+++|+|++ . +.+|+.+++++ ++|++++|+|| ++|||+|.. .++.+.++++++.+. +. +++|+.+
T Consensus 1 l~~g~~~P~f~~~~~-~~~g~~~~~~~-~~gk~~lv~f~-~~~C~~C~~-~~~~l~~l~~~~~~~-~~-~~~v~~~~~~~ 74 (148)
T 2b5x_A 1 MKLRQPMPELTGEKA-WLNGEVTREQL-IGEKPTLIHFW-SISCHLCKE-AMPQVNEFRDKYQDQ-LN-VVAVHMPRSED 74 (148)
T ss_dssp CCTTCBCCCCCCCSE-EESCCCCHHHH-TTTSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTTT-SE-EEEEECCCSTT
T ss_pred CCCCCCCCCCccccc-cccCcccchhh-cCCCEEEEEEE-cCCCHHHHH-HhHHHHHHHHHhcCC-cE-EEEEEcCCCcc
Confidence 578999999999 5 68999999999 79999999988 899999996 589999999999866 77 9999976
Q ss_pred --CHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecchhh
Q psy5399 77 --DAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLVDE 153 (156)
Q Consensus 77 --~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~~~ 153 (156)
+++.+++|+++++++ ||++.|.+..+++.||+. ..|+++|+| +|+|++...+........+.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 142 (148)
T 2b5x_A 75 DLDPGKIKETAAEHDIT--QPIFVDSDHALTDAFENE----------YVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNR 142 (148)
T ss_dssp TSSHHHHHHHHHHTTCC--SCEEECSSCHHHHHTCCC----------CSSEEEEECTTCBEEEEEESCSTTHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCC--cceEECCchhHHHHhCCC----------CCCEEEEECCCCcEEEEecCCCCHHHHHHHHHH
Confidence 689999999999998 999999999999999984 245589998 99999998875443333444444
Q ss_pred hh
Q psy5399 154 LK 155 (156)
Q Consensus 154 ~l 155 (156)
+|
T Consensus 143 ~l 144 (148)
T 2b5x_A 143 VL 144 (148)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 75
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.93 E-value=2.9e-26 Score=164.98 Aligned_cols=140 Identities=15% Similarity=0.125 Sum_probs=108.3
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------ 76 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------ 76 (156)
++.|+++|+|++. +.+|+++++++ ++||++||+|| ++|||+|.. ++|.|++++++|+++++. |++|+.|
T Consensus 22 ~~~~~~~p~f~l~-~~~G~~~~l~~-~~Gk~vll~F~-atwC~~C~~-~~~~l~~l~~~~~~~~v~-vv~vs~d~~~~~~ 96 (190)
T 2vup_A 22 MSAASSIFDFEVL-DADHKPYNLVQ-HKGSPLLIYNV-ASKCGYTKG-GYETATTLYNKYKSQGFT-VLAFPCNQFGGQE 96 (190)
T ss_dssp --CCCSGGGSCCB-BTTSSBCCGGG-GTTSCEEEEEE-CSSSTTHHH-HHHHHHHHHHHHGGGTCE-EEEEECCCSTTCC
T ss_pred CCCCCcccCeEEE-cCCCCEEEHHH-cCCCEEEEEEe-cCCCCccHH-HHHHHHHHHHHHhcCCeE-EEEEEcCccCCCC
Confidence 5789999999999 79999999999 79999999987 899999985 599999999999988999 9999987
Q ss_pred --CHHHHHHHH-HHcCCCcceEEEe--cCCchhHH---------hhCCeeeccCCCcc--eeeeEEEEEe-CCcEEEEEE
Q psy5399 77 --DAFVMEAWC-RKNNAEGKIRFLA--DPNLEFTK---------KLGVEHEIPVLGGW--RSKRYSMVVD-DGKITQLNI 139 (156)
Q Consensus 77 --~~~~~~~~~-~~~~~~~~f~~~~--D~~~~~~~---------~~gv~~~~~~~~~~--~~~~~~~iid-~G~I~~~~~ 139 (156)
+++.+++|+ ++++++ ||++. |.++..++ .||+. +.+ ...|++|||| +|+|++.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~--~p~l~~~D~~~~~~~~~~~~l~~~~~~v~------~~P~i~~~~~~~lid~~G~i~~~~~ 168 (190)
T 2vup_A 97 PGNEEEIKEFVCTKFKAE--FPIMAKINVNGENAHPLYEYMKKTKPGIL------KTKAIKWNFTSFLIDRDGVPVERFS 168 (190)
T ss_dssp CSCHHHHHHHHHHHHCCC--SCBBCCCBSSSTTBCHHHHHHHHHSCCGG------GCCSCCSTTCEEEECTTSCEEEEEC
T ss_pred CCCHHHHHHHHHHhcCCC--eEEEeecccCcccccHHHHHHHhhcCCcC------CCccccccceEEEECCCCcEEEEEC
Confidence 789999999 899998 99997 55555433 13442 111 0112589999 999999987
Q ss_pred ccCCCceeecchhhhh
Q psy5399 140 EPDGTGLTCSLVDELK 155 (156)
Q Consensus 140 ~~~~~~~~~~~~~~~l 155 (156)
+........+.++++|
T Consensus 169 g~~~~~~l~~~i~~ll 184 (190)
T 2vup_A 169 PGASVKDIEKKLIPLL 184 (190)
T ss_dssp TTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 6544333334444443
No 76
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.93 E-value=1e-25 Score=157.47 Aligned_cols=141 Identities=16% Similarity=0.229 Sum_probs=114.6
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC-HHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND-AFV 80 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~-~~~ 80 (156)
.+.+|+++|+|++. +.+|+.+++++ ++||++||+|| ++|||+|.. .+|.|.++++++++.++. +++|+.++ ++.
T Consensus 7 ~~~~g~~~p~~~l~-~~~g~~~~l~~-~~gk~vlv~f~-~~~C~~C~~-~~~~l~~l~~~~~~~~v~-~v~v~~d~~~~~ 81 (165)
T 3or5_A 7 ADARPTPAPSFSGV-TVDGKPFSSAS-LKGKAYIVNFF-ATWCPPCRS-EIPDMVQVQKTWASRGFT-FVGIAVNEQLPN 81 (165)
T ss_dssp CCCCCCBCCCCEEE-CTTSCEEEGGG-GTTCEEEEEEE-CTTSHHHHH-HHHHHHHHHHHHTTTTEE-EEEEECSCCHHH
T ss_pred hhcCCCCCCCceee-CCCCCEechhH-cCCCEEEEEEE-cCcCHHHHH-HHHHHHHHHHHhccCCeE-EEEEECCCCHHH
Confidence 36799999999999 79999999999 79999999988 999999996 589999999999988888 99999875 888
Q ss_pred HHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecchhhh
Q psy5399 81 MEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLVDEL 154 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~~~~ 154 (156)
.++|+++++++ |+++.|.+ .+.+.|+..... + ....|++||+| +|+|++.+.+........+.++.+
T Consensus 82 ~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~---~-i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 82 VKNYMKTQGII--YPVMMATP-ELIRAFNGYIDG---G-ITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp HHHHHHHHTCC--SCEEECCH-HHHHHHHTTSTT---C-SCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCC--CceEecCH-HHHHHHhhhhcc---C-CCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 99999999999 99999975 888999543211 0 12355689998 999999887765433333334333
No 77
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.92 E-value=7.2e-26 Score=157.46 Aligned_cols=121 Identities=14% Similarity=0.136 Sum_probs=103.3
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCH-HHH
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDA-FVM 81 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~-~~~ 81 (156)
...|+++|+|++. +.+|+++++++ ++||+++|+|| ++|||+|.. ++|.|.+++++|+++++. |++|+.|+. +..
T Consensus 9 ~~~g~~~p~f~l~-~~~G~~~~l~~-~~gk~vll~F~-a~wC~~C~~-~~~~l~~l~~~~~~~~~~-vv~i~~d~~~~~~ 83 (152)
T 2lrt_A 9 KIKEASIIDIQLK-DLKGNTRSLTD-LKGKVVLIDFT-VYNNAMSAA-HNLALRELYNKYASQGFE-IYQISLDGDEHFW 83 (152)
T ss_dssp SSCTTCSCCCCEE-BTTSCEECTTT-GGGSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHGGGTEE-EEEEECSCCHHHH
T ss_pred hccCCCCCCeEEE-cCCCCEEeHHH-hCCCEEEEEEE-cCCChhhHH-HHHHHHHHHHHhccCCeE-EEEEEccCCHHHH
Confidence 3589999999999 79999999999 79999999998 789999996 599999999999988898 999998854 445
Q ss_pred HHHHHHcCCCcceEEEecCCch---hHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 82 EAWCRKNNAEGKIRFLADPNLE---FTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 82 ~~~~~~~~~~~~f~~~~D~~~~---~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
+++.. +++ |+++.|.++. ++++||+.. .|++|||| +|+|++.+.+..
T Consensus 84 ~~~~~--~~~--~~~~~d~~~~~~~~~~~~~v~~----------~P~~~lid~~G~i~~~~~g~~ 134 (152)
T 2lrt_A 84 KTSAD--NLP--WVCVRDANGAYSSYISLYNVTN----------LPSVFLVNRNNELSARGENIK 134 (152)
T ss_dssp HHHHT--TCS--SEEEECSSGGGCHHHHHHTCCS----------CSEEEEEETTTEEEEETTTCS
T ss_pred HHHHh--CCC--ceEEECCCCcchHHHHHcCccc----------CceEEEECCCCeEEEecCCHH
Confidence 56654 366 9999999986 999999842 45599999 999999877644
No 78
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.92 E-value=2e-25 Score=163.25 Aligned_cols=145 Identities=10% Similarity=0.006 Sum_probs=107.2
Q ss_pred cCCCcCCcceecccCC-CceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------
Q psy5399 4 QVGDTLPDALLHENTP-QTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------ 76 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~-g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------ 76 (156)
..++++|+|+++ +.+ |++++|++ ++||++||+|| ++|||+|+. ++|.|++++++|+++|+. |++|+.|
T Consensus 21 ~~~~~~p~f~l~-~~~~G~~v~l~~-~~Gk~vlv~Fw-atwC~~C~~-e~p~l~~l~~~~~~~g~~-vv~v~~d~~~~~e 95 (208)
T 2f8a_A 21 QSMQSVYAFSAR-PLAGGEPVSLGS-LRGKVLLIENV-ASLGGTTVR-DYTQMNELQRRLGPRGLV-VLGFPCNQFGHQE 95 (208)
T ss_dssp -CCCCGGGCEEC-BTTCSSCEEGGG-GTTSEEEEEEE-CSSSTTHHH-HHHHHHHHHHHHGGGTEE-EEEEECCCSTTTT
T ss_pred hhcCccCceEee-eCCCCCCccHHH-cCCCEEEEEEE-CCCCccHHH-HHHHHHHHHHHccCCCeE-EEEEECCcccccC
Confidence 468899999999 798 99999999 79999888888 999999995 599999999999988998 9999975
Q ss_pred --CHHHHHHHHH------HcCCCcceEEEecCC--chhH----H----hhCCe--------eec-----cC--CCcceee
Q psy5399 77 --DAFVMEAWCR------KNNAEGKIRFLADPN--LEFT----K----KLGVE--------HEI-----PV--LGGWRSK 123 (156)
Q Consensus 77 --~~~~~~~~~~------~~~~~~~f~~~~D~~--~~~~----~----~~gv~--------~~~-----~~--~~~~~~~ 123 (156)
+++++++|++ +++++ ||+++|.+ +..+ . .++.. ... .. .+.....
T Consensus 96 ~d~~~~i~~f~~~~~~~~~~~~~--fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 173 (208)
T 2f8a_A 96 NAKNEEILNSLKYVRPGGGFEPN--FMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWN 173 (208)
T ss_dssp CSCHHHHHHHHHHTSSCTTCCCS--SEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCST
T ss_pred CCCHHHHHHHHHhcccccccccc--eEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccC
Confidence 5688999998 88888 99997643 3221 1 12100 000 00 0112223
Q ss_pred eEEEEEe-CCcEEEEEEccCCCceeecchhhhh
Q psy5399 124 RYSMVVD-DGKITQLNIEPDGTGLTCSLVDELK 155 (156)
Q Consensus 124 ~~~~iid-~G~I~~~~~~~~~~~~~~~~~~~~l 155 (156)
|++|||| +|+|++.+.+........+.++++|
T Consensus 174 p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ll 206 (208)
T 2f8a_A 174 FEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 206 (208)
T ss_dssp TCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred ceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHHh
Confidence 6699999 9999999987654444445555554
No 79
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.92 E-value=8.8e-26 Score=157.54 Aligned_cols=123 Identities=18% Similarity=0.270 Sum_probs=109.9
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVM 81 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~ 81 (156)
++++|+++|+|++. +.+|+.+++++ ++||+++|+|| ++|||+|.. +++.|.++++++.+.++. +++|+.++ ..
T Consensus 14 ~~~~G~~~p~f~l~-~~~g~~~~l~~-~~gk~vll~F~-~~~C~~C~~-~~~~l~~~~~~~~~~~~~-~v~v~~d~--~~ 86 (158)
T 3hdc_A 14 LVRTGALAPNFKLP-TLSGENKSLAQ-YRGKIVLVNFW-ASWCPYCRD-EMPSMDRLVKSFPKGDLV-VLAVNVEK--RF 86 (158)
T ss_dssp CCCTTSBCCCCEEE-CTTSCEEESGG-GTTSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHSSTTSEE-EEEEECSS--SC
T ss_pred ccCCCCcCCCceeE-cCCCCEEehHH-hCCCEEEEEEE-CCcCHHHHH-HHHHHHHHHHHcccCCeE-EEEEeCCH--HH
Confidence 36899999999999 79999999999 79999999988 999999995 589999999999877888 99999887 57
Q ss_pred HHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 82 EAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 82 ~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
++|.++++++ |+++.|.+..+++.||+.. .|++|||| +|+|++.+.+...
T Consensus 87 ~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~----------~P~~~lid~~G~i~~~~~G~~~ 137 (158)
T 3hdc_A 87 PEKYRRAPVS--FNFLSDATGQVQQRYGANR----------LPDTFIVDRKGIIRQRVTGGIE 137 (158)
T ss_dssp CGGGGGCCCS--CEEEECTTSHHHHHTTCCS----------SSEEEEECTTSBEEEEEESCCC
T ss_pred HHHHHHcCCC--ceEEECchHHHHHHhCCCC----------cceEEEEcCCCCEEEEEeCCCc
Confidence 7899999998 9999999999999999942 45589998 9999999987654
No 80
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.92 E-value=3.2e-25 Score=154.90 Aligned_cols=141 Identities=9% Similarity=0.071 Sum_probs=108.9
Q ss_pred cCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCC-CCcCChhhHHHhHHHHHH----cCCCEEEEEecCC----H
Q psy5399 8 TLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPG-CSVTHLPGYLAKEKDLKA----KGIHEIFCIAVND----A 78 (156)
Q Consensus 8 ~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~-C~~~~l~~l~~~~~~~~~----~~~~~v~~is~d~----~ 78 (156)
.+|+|++. +.+|+++++++ ++||+++|+|| ++|||. |.. ++|.|++++++|++ .++. |++||.|. +
T Consensus 2 ~ap~f~l~-~~~G~~~~l~~-~~gk~vll~f~-~~~C~~~C~~-~~~~l~~l~~~~~~~~~~~~~~-vv~vs~d~~~d~~ 76 (164)
T 2ggt_A 2 LGGPFSLT-THTGERKTDKD-YLGQWLLIYFG-FTHCPDVCPE-ELEKMIQVVDEIDSITTLPDLT-PLFISIDPERDTK 76 (164)
T ss_dssp CCCCCEEE-ETTSCEEEGGG-GTTCEEEEEEE-CTTCSSHHHH-HHHHHHHHHHHHHHSSSSCCEE-EEEEESCTTTCCH
T ss_pred CCCCeEEE-eCCCCEEeHHH-cCCCEEEEEEE-eCCCCchhHH-HHHHHHHHHHHHhhccCCCcEE-EEEEEeCCCCCCH
Confidence 48999999 79999999999 79999999888 899998 996 59999999999987 4788 99999874 8
Q ss_pred HHHHHHHHHcCCCcceEEEe---cCCchhHHhhCCeeecc---CCCc--ceeeeEEEEEe-CCcEEEEEEccCCCceeec
Q psy5399 79 FVMEAWCRKNNAEGKIRFLA---DPNLEFTKKLGVEHEIP---VLGG--WRSKRYSMVVD-DGKITQLNIEPDGTGLTCS 149 (156)
Q Consensus 79 ~~~~~~~~~~~~~~~f~~~~---D~~~~~~~~~gv~~~~~---~~~~--~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~ 149 (156)
+.+++|+++++.+ |+++. |....++++||+..... ..+. ....+++|||| +|+|++.+.+........+
T Consensus 77 ~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~ 154 (164)
T 2ggt_A 77 EAIANYVKEFSPK--LVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAA 154 (164)
T ss_dssp HHHHHHHHTTCSS--CEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHH
T ss_pred HHHHHHHHHcCCC--eEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHH
Confidence 8999999999998 99995 44567999999864210 0000 01123689999 9999999876544333344
Q ss_pred chhhhh
Q psy5399 150 LVDELK 155 (156)
Q Consensus 150 ~~~~~l 155 (156)
.++++|
T Consensus 155 ~l~~ll 160 (164)
T 2ggt_A 155 SIATHM 160 (164)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 81
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.92 E-value=1.3e-25 Score=160.19 Aligned_cols=142 Identities=10% Similarity=0.112 Sum_probs=106.9
Q ss_pred cCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec--------
Q psy5399 4 QVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV-------- 75 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~-------- 75 (156)
.+|+.+|+|++. +.+|+++++++ ++||++||+|| ++|||+|.. ++|.|++++++|+++++. |++||.
T Consensus 13 ~~~~~~p~f~l~-d~~G~~v~l~~-~~Gk~vlv~F~-atwC~~C~~-~~p~l~~l~~~~~~~~~~-vi~is~d~~~~~~~ 87 (180)
T 3kij_A 13 PKINSFYAFEVK-DAKGRTVSLEK-YKGKVSLVVNV-ASDCQLTDR-NYLGLKELHKEFGPSHFS-VLAFPCNQFGESEP 87 (180)
T ss_dssp CCCCCGGGCEEE-BTTSCEEEGGG-GTTSEEEEEEE-CSSSTTHHH-HHHHHHHHHHHHTTTSEE-EEEEECCCSTTCCC
T ss_pred CCcCcccceEEe-cCCCCEecHHH-cCCCEEEEEEE-ecCCCCcHH-HHHHHHHHHHHhccCCeE-EEEEECCccccCCC
Confidence 489999999999 79999999999 79998888876 999999996 599999999999988898 999995
Q ss_pred CCHHHHHHHHHH-cCCCcceEEEecCC--chh---HHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceee
Q psy5399 76 NDAFVMEAWCRK-NNAEGKIRFLADPN--LEF---TKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTC 148 (156)
Q Consensus 76 d~~~~~~~~~~~-~~~~~~f~~~~D~~--~~~---~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~ 148 (156)
++++.+++|+++ ++++ ||++.+.+ +.. ...|..... .+.+...+++|||| +|+|++.+.+........
T Consensus 88 d~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~---~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 162 (180)
T 3kij_A 88 RPSKEVESFARKNYGVT--FPIFHKIKILGSEGEPAFRFLVDSS---KKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIR 162 (180)
T ss_dssp SCHHHHHHHHHHHHCCC--SCBBCCCCCSSTTCCHHHHHHHHHH---TCCCSSTTCEEEECTTSCEEEEECTTCCGGGTH
T ss_pred CCHHHHHHHHHHhcCCC--CceeeeeeccCccccHHHHHHHhcC---CCCccccceEEEECCCCCEEEEECCCCCHHHHH
Confidence 478999999999 9999 99976433 211 112211100 01111112289999 999999988765555545
Q ss_pred cchhhhh
Q psy5399 149 SLVDELK 155 (156)
Q Consensus 149 ~~~~~~l 155 (156)
+.++++|
T Consensus 163 ~~i~~lL 169 (180)
T 3kij_A 163 PDIAALV 169 (180)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 82
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.92 E-value=2.7e-25 Score=163.44 Aligned_cols=144 Identities=14% Similarity=0.094 Sum_probs=105.5
Q ss_pred cCCCcCCcceecccCC-CceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------
Q psy5399 4 QVGDTLPDALLHENTP-QTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------ 76 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~-g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------ 76 (156)
..+..+|+|+++ +.+ |++++|++ ++||++||+|| ++|||.|. + +|.|++++++|+++|+. |++||.|
T Consensus 30 ~~~~~~pdF~l~-d~~~G~~v~Lsd-~~GKvvll~Fw-At~C~~c~-e-~p~L~~l~~~~~~~g~~-Vlgvs~d~f~~~e 103 (215)
T 2i3y_A 30 DEKGTIYDYEAI-ALNKNEYVSFKQ-YVGKHILFVNV-ATYCGLTA-Q-YPELNALQEELKPYGLV-VLGFPCNQFGKQE 103 (215)
T ss_dssp CCCCCGGGCEEE-BSSSSCEEEGGG-GTTSEEEEEEE-CSSSGGGG-G-HHHHHHHHHHHGGGTEE-EEEEECCCSTTCC
T ss_pred cccCCcCCcEee-eCCCCCEEcHHH-hCCCEEEEEEe-CCCCCChH-h-HHHHHHHHHHhccCCeE-EEEEEccccCcCC
Confidence 456789999999 799 99999999 79998888887 99999998 5 89999999999999998 9999853
Q ss_pred --CHHHHHHHHH------HcCCCcceEEEecCC--chhH-HhhCCeeecc-----CCC-------------cceeeeEEE
Q psy5399 77 --DAFVMEAWCR------KNNAEGKIRFLADPN--LEFT-KKLGVEHEIP-----VLG-------------GWRSKRYSM 127 (156)
Q Consensus 77 --~~~~~~~~~~------~~~~~~~f~~~~D~~--~~~~-~~~gv~~~~~-----~~~-------------~~~~~~~~~ 127 (156)
+.+++++|++ +++++ ||+++|.+ +..+ ..|+...... ..| ...+.|++|
T Consensus 104 ~~~~~~i~~f~~~~~~~~~~~~~--fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttf 181 (215)
T 2i3y_A 104 PGDNKEILPGLKYVRPGGGFVPS--FQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKF 181 (215)
T ss_dssp CSCHHHHHHHHHHTSSCTTCCCS--SEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEE
T ss_pred CCCHHHHHHHHHhccchhccCcc--ceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEE
Confidence 5788999999 89998 99998754 3321 1222111000 000 111225699
Q ss_pred EEe-CCcEEEEEEccCCCceeecchhhhh
Q psy5399 128 VVD-DGKITQLNIEPDGTGLTCSLVDELK 155 (156)
Q Consensus 128 iid-~G~I~~~~~~~~~~~~~~~~~~~~l 155 (156)
||| +|+|++.+.+........+.++.+|
T Consensus 182 LID~~G~vv~~~~g~~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 182 LVGPDGIPVMRWSHRATVSSVKTDILAYL 210 (215)
T ss_dssp EECTTSCEEEEECTTSCHHHHHHHHHHHG
T ss_pred EECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 999 9999999876443333444455444
No 83
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.1e-25 Score=159.15 Aligned_cols=136 Identities=16% Similarity=0.142 Sum_probs=94.3
Q ss_pred CCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec--------C
Q psy5399 5 VGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV--------N 76 (156)
Q Consensus 5 ~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~--------d 76 (156)
-|..+|+|+++ +.+|++++|++ ++||++||+|| ++|||.|. + +|.|.+++++|+++++. |++||. +
T Consensus 8 ~~~~~~~f~l~-d~~G~~~~l~~-~~Gk~vll~F~-a~wC~~C~-~-~~~l~~l~~~~~~~~v~-vv~vs~d~~~~~~~d 81 (171)
T 3cmi_A 8 HMSEFYKLAPV-DKKGQPFPFDQ-LKGKVVLIVNV-ASKCGFTP-Q-YKELEALYKRYKDEGFT-IIGFPCNQFGHQEPG 81 (171)
T ss_dssp --CGGGGCCCB-BTTSCBCCGGG-GTTCEEEEEEE-ESSSCCHH-H-HHHHHHHHHHHGGGTEE-EEEEEECSCC-----
T ss_pred chhheeeeEEE-cCCCCEecHHH-cCCCEEEEEEE-ecCCCcch-h-HHHHHHHHHHhccCCeE-EEEEECcccCCCCCC
Confidence 46789999999 79999999999 79999999988 99999999 6 89999999999988898 999997 4
Q ss_pred CHHHHHHHH-HHcCCCcceEEEecCC--ch-hHH--------hhCCeeeccCCCcce---eeeEEEEEe-CCcEEEEEEc
Q psy5399 77 DAFVMEAWC-RKNNAEGKIRFLADPN--LE-FTK--------KLGVEHEIPVLGGWR---SKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 77 ~~~~~~~~~-~~~~~~~~f~~~~D~~--~~-~~~--------~~gv~~~~~~~~~~~---~~~~~~iid-~G~I~~~~~~ 140 (156)
+++.+++|+ ++++++ ||++.|.+ +. ..+ .||+. + .| ..|++|||| +|+|++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~--~p~~~d~d~~~~~~~~~~~~~~~~~~~v~------~-~P~i~~~~~~~lid~~G~i~~~~~g 152 (171)
T 3cmi_A 82 SDEEIAQFCQLNYGVT--FPIMKKIDVNGGNEDPVYKFLKSQKSGML------G-LRGIKWNFEKFLVDKKGKVYERYSS 152 (171)
T ss_dssp -------------CCC--SCBBCCCBSSSTTBCHHHHHHHHHSCCSS------S-CCSCCSTTCEEEECSSSCEEEEECT
T ss_pred CHHHHHHHHHhccCCC--ceEEeeccCCCccchHHHHHHHhccCCcC------C-CCcccccceEEEECCCCCEEEEeCC
Confidence 678889999 999998 99998754 32 222 34442 1 12 111589998 9999999876
Q ss_pred cCCCceeecchhhhh
Q psy5399 141 PDGTGLTCSLVDELK 155 (156)
Q Consensus 141 ~~~~~~~~~~~~~~l 155 (156)
........+.++.+|
T Consensus 153 ~~~~~~l~~~i~~ll 167 (171)
T 3cmi_A 153 LTKPSSLSETIEELL 167 (171)
T ss_dssp TSCGGGGHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 544344444455444
No 84
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.92 E-value=2.1e-25 Score=154.54 Aligned_cols=121 Identities=22% Similarity=0.385 Sum_probs=108.2
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec---CCH
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV---NDA 78 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~---d~~ 78 (156)
.+++|+++|+|++. +.+|+.+++++ ++ |+++|+|| ++||++|.. +++.|.++++++ ++. +++|+. +++
T Consensus 4 ~l~~g~~~p~f~l~-~~~g~~~~l~~-~~-k~vll~f~-~~~C~~C~~-~~~~l~~l~~~~---~v~-~v~v~~d~~~~~ 74 (154)
T 3ia1_A 4 AVKPGEPLPDFLLL-DPKGQPVTPAT-VS-KPAVIVFW-ASWCTVCKA-EFPGLHRVAEET---GVP-FYVISREPRDTR 74 (154)
T ss_dssp CCCSBEECCCCCEE-CTTSCEECTTT-SC-SSEEEEEE-CTTCHHHHH-HHHHHHHHHHHH---CCC-EEEEECCTTCCH
T ss_pred cCCCCCcCCceEEE-CCCCCEechHH-cC-CeEEEEEE-cccChhHHH-HHHHHHHHHHHc---CCe-EEEEeCCCcccH
Confidence 37899999999999 79999999999 68 99999988 999999996 589999999999 788 999999 789
Q ss_pred HHHHHHHHHcCCCcceEEEec---CCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 79 FVMEAWCRKNNAEGKIRFLAD---PNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 79 ~~~~~~~~~~~~~~~f~~~~D---~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
+..++|+++++++ ||++.| .+..++++||+. ..|++||+| +|+|++...+...
T Consensus 75 ~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~g~~~ 131 (154)
T 3ia1_A 75 EVVLEYMKTYPRF--IPLLASDRDRPHEVAARFKVL----------GQPWTFVVDREGKVVALFAGRAG 131 (154)
T ss_dssp HHHHHHHTTCTTE--EECBCCSSCCHHHHHTTSSBC----------SSCEEEEECTTSEEEEEEESBCC
T ss_pred HHHHHHHHHcCCC--cccccccccchHHHHHHhCCC----------cccEEEEECCCCCEEEEEcCCCC
Confidence 9999999999998 999998 668999999984 255689998 9999999887543
No 85
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.92 E-value=4.5e-25 Score=150.63 Aligned_cols=122 Identities=18% Similarity=0.309 Sum_probs=107.7
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC----CH
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN----DA 78 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d----~~ 78 (156)
+.+|+++|+|++. +.+|+.+++++ +||+++|+|| ++|||+|.. .++.|.++++++++.++. +++|+.+ ++
T Consensus 9 ~~~g~~~p~~~l~-~~~g~~~~l~~--~gk~~ll~f~-~~~C~~C~~-~~~~l~~~~~~~~~~~~~-~v~v~~d~~~~~~ 82 (145)
T 3erw_A 9 EKQPAVPAVFLMK-TIEGEDISIPN--KGQKTILHFW-TSWCPPCKK-ELPQFQSFYDAHPSDSVK-LVTVNLVNSEQNQ 82 (145)
T ss_dssp ---CCSCCEEEEE-CTTSCEEEESC--TTSEEEEEEE-CSSCHHHHH-HHHHHHHHHHHCCCSSEE-EEEEECGGGSSCH
T ss_pred ccCCCcCCCceee-cCCCCEEeHHH--CCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHcCCCCEE-EEEEEccCCcCCH
Confidence 5789999999999 79999999999 8999999998 999999996 589999999999877888 9999885 78
Q ss_pred HHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 79 FVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 79 ~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
+.+++|.++++++ |+++.|.+..+++.|++. ..|+++|+| +|+|++.+.+..
T Consensus 83 ~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~g~~ 135 (145)
T 3erw_A 83 QVVEDFIKANKLT--FPIVLDSKGELMKEYHII----------TIPTSFLLNEKGEIEKTKIGPM 135 (145)
T ss_dssp HHHHHHHHHTTCC--SCEEECSSSHHHHHTTCC----------EESEEEEECTTCCEEEEEESCC
T ss_pred HHHHHHHHHcCCc--eeEEEcCchhHHHhcCcC----------ccCeEEEEcCCCcEEEEEcCCc
Confidence 9999999999999 999999999999999984 356699998 999999887743
No 86
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.92 E-value=5.6e-25 Score=155.90 Aligned_cols=135 Identities=12% Similarity=0.207 Sum_probs=106.2
Q ss_pred ccCCCcCC-cceecccCCCceeehhhHhCCCeEEEEEeeCCCCC-CCCcCChhhHHHhHHHHHH--cCCCEEEEEecC--
Q psy5399 3 AQVGDTLP-DALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTP-GCSVTHLPGYLAKEKDLKA--KGIHEIFCIAVN-- 76 (156)
Q Consensus 3 l~~G~~~P-~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp-~C~~~~l~~l~~~~~~~~~--~~~~~v~~is~d-- 76 (156)
+.+|+++| +|++. +.+|+++++++ ++||++||+|| ++||| .|.. +++.|+++++++.+ .+++ +++||.|
T Consensus 1 m~~G~~~P~~f~l~-d~~G~~v~l~~-~~Gk~vll~F~-~t~C~~~C~~-~~~~l~~~~~~~~~~~~~~~-vv~is~d~~ 75 (170)
T 3me7_A 1 MSLGTYVPGDITLV-DSYGNEFQLKN-LKGKPIILSPI-YTHCRAACPL-ITKSLLKVIPKLGTPGKDFW-VITFTFDPK 75 (170)
T ss_dssp -CTTCBCCTTCEEE-ETTCCEEEGGG-GTTSCEEEEEE-CTTCCSHHHH-HHHHHHTTHHHHCCBTTTBE-EEEEECCTT
T ss_pred CCCCCcCCCCeEEE-cCCcCEEchHH-hCCCEEEEEEE-CCCCCchhHH-HHHHHHHHHHHhhhcCCceE-EEEEECCCC
Confidence 36899999 99999 79999999999 79999999988 88998 5996 58999999999965 4577 9999975
Q ss_pred -CHHHHHHHHHHcCCCc-ceEEEe--c--CCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 77 -DAFVMEAWCRKNNAEG-KIRFLA--D--PNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 77 -~~~~~~~~~~~~~~~~-~f~~~~--D--~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
+++.+++|+++++.+. .++++. | ....++++||+...... +.....|++|||| +|+|++++++...
T Consensus 76 d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~lID~~G~i~~~~~g~~~ 148 (170)
T 3me7_A 76 DTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAG-NDFIHPNVVVVLSPELQIKDYIYGVNY 148 (170)
T ss_dssp CCHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEET-TEEECCCEEEEECTTSBEEEEEESSSC
T ss_pred CCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCC-CccccCceEEEECCCCeEEEEEeCCCC
Confidence 7899999999999773 244443 3 23689999887643211 1122356699999 9999999877644
No 87
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.91 E-value=1.4e-25 Score=157.27 Aligned_cols=114 Identities=14% Similarity=0.223 Sum_probs=103.4
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------ 76 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------ 76 (156)
+++|+++|+|++. +.+|+.+++++ ++||++||.|| ++|||+|.. ++|.|.++++++. ++. |++|+.+
T Consensus 11 ~~~g~~~p~~~l~-~~~g~~~~l~~-~~gk~~lv~F~-~~~C~~C~~-~~~~l~~l~~~~~--~v~-vv~i~~d~~~~~~ 83 (165)
T 3ha9_A 11 EEVLEREASFSLT-TIDGEVISLNN-VGGDVVILWFM-AAWCPSCVY-MADLLDRLTEKYR--EIS-VIAIDFWTAEALK 83 (165)
T ss_dssp HHHHHHHHCCCEE-BTTSCEECGGG-CCSSEEEEEEE-CTTCTTHHH-HHHHHHHHHHHCT--TEE-EEEEECCSHHHHH
T ss_pred ccccCcCCCCEee-cCCCCEeeHHH-hCCCEEEEEEE-CCCCcchhh-hHHHHHHHHHHcC--CcE-EEEEEeccccccc
Confidence 4578999999999 79999999999 79999999988 999999996 5899999999987 788 9999986
Q ss_pred -------------CHHHHHHHHHHcCC-CcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEE
Q psy5399 77 -------------DAFVMEAWCRKNNA-EGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQ 136 (156)
Q Consensus 77 -------------~~~~~~~~~~~~~~-~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~ 136 (156)
+++.+++|++++++ + |+++.| +..+++.||+.. .|++||+| +|+|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d-~~~~~~~~~v~~----------~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 84 ALGLNKPGYPPPDTPEMFRKFIANYGDPS--WIMVMD-DGSLVEKFNVRS----------IDYIVIMDKSSNVLY 145 (165)
T ss_dssp HHTCCSTTSCCCCCHHHHHHHHHHHSCTT--SEEEEC-CSHHHHHTTCCS----------SSEEEEEETTCCEEE
T ss_pred ccccccccCCCCCCHHHHHHHHHHcCCCC--eeEEeC-hHHHHHHhCCCC----------ceEEEEEcCCCcEEE
Confidence 78999999999999 7 999999 999999999842 45589998 999999
No 88
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.91 E-value=8.4e-25 Score=158.75 Aligned_cols=145 Identities=16% Similarity=0.110 Sum_probs=108.6
Q ss_pred ccCCCcC--CcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCC-CCcCChhhHHHhHHHHHHc---CCCEEEEEecC
Q psy5399 3 AQVGDTL--PDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPG-CSVTHLPGYLAKEKDLKAK---GIHEIFCIAVN 76 (156)
Q Consensus 3 l~~G~~~--P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~-C~~~~l~~l~~~~~~~~~~---~~~~v~~is~d 76 (156)
..+|+++ |+|++. +.+|+++++++ ++||++||+|| ++|||. |.. ++|.|+++++++.+. ++. |++||.|
T Consensus 13 ~~~g~~~~~p~f~l~-d~~G~~v~l~~-~~Gk~vlv~F~-at~C~~vC~~-~~~~l~~l~~~~~~~~~~~v~-vv~Is~D 87 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLE-DMYGNEFTEKN-LLGKFSIIYFG-FSNCPDICPD-ELDKLGLWLNTLSSKYGITLQ-PLFITCD 87 (200)
T ss_dssp ---CCCCCCCCCEEE-ETTSCEEEGGG-GTTSCEEEEEE-CTTCCSHHHH-HHHHHHHHHHHHHHHHCCCCE-EEEEESC
T ss_pred hccCCCCcCCCEEEE-cCCCCEEeHHH-cCCCEEEEEEE-CCCCcchhHH-HHHHHHHHHHHHHHhhCCceE-EEEEECC
Confidence 4689886 999999 79999999999 79999999888 899997 995 599999999999864 788 9999987
Q ss_pred ----CHHHHHHHHHHcCCCcceEEEecC---CchhHHhhCCeeecc-C--CCc---ceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 77 ----DAFVMEAWCRKNNAEGKIRFLADP---NLEFTKKLGVEHEIP-V--LGG---WRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 77 ----~~~~~~~~~~~~~~~~~f~~~~D~---~~~~~~~~gv~~~~~-~--~~~---~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
+++.+++|+++++.+ |+.+.+. ...++++||+..... . .|. ....|++|||| +|+|++.+.+..
T Consensus 88 ~~~d~~~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~ 165 (200)
T 2b7k_A 88 PARDSPAVLKEYLSDFHPS--ILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNY 165 (200)
T ss_dssp TTTCCHHHHHHHHTTSCTT--CEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTC
T ss_pred CCCCCHHHHHHHHHHcCCC--ceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCC
Confidence 689999999999988 9988753 468999999963110 0 000 00134589999 999999987644
Q ss_pred CCceeecchhhh
Q psy5399 143 GTGLTCSLVDEL 154 (156)
Q Consensus 143 ~~~~~~~~~~~~ 154 (156)
......+.++++
T Consensus 166 ~~~~~~~~i~~~ 177 (200)
T 2b7k_A 166 DEKTGVDKIVEH 177 (200)
T ss_dssp CTTHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 333444444443
No 89
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=1.4e-26 Score=161.49 Aligned_cols=124 Identities=16% Similarity=0.267 Sum_probs=108.2
Q ss_pred CccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHH-hHHHHH-HcCCCEEEEEecCCH-
Q psy5399 2 CAQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLA-KEKDLK-AKGIHEIFCIAVNDA- 78 (156)
Q Consensus 2 ~l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~-~~~~~~-~~~~~~v~~is~d~~- 78 (156)
.+++|+++|+|++. +.+|+.+++++ ++||+++|+|| ++|||+|.. ++|.|.+ +++++. +.++. +++|+.|+.
T Consensus 6 ~l~~g~~~p~f~l~-~~~g~~~~l~~-~~gk~vll~f~-a~~C~~C~~-~~~~l~~~l~~~~~~~~~~~-vv~v~~d~~~ 80 (159)
T 2ls5_A 6 IVRIGEMAPDFTIT-LTDGKQVTLSS-LRGKVVMLQFT-ASWCGVCRK-EMPFIEKDIWLKHKDNADFA-LIGIDRDEPL 80 (159)
Confidence 36899999999999 79999999999 69999999888 999999995 5899998 999998 77888 999998764
Q ss_pred HHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 79 FVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 79 ~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
+..++|.++++++ ||++.|++..+++.||+.. ...|++||+| +|+|++...+
T Consensus 81 ~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~--------~~~P~~~lid~~G~i~~~~~g 133 (159)
T 2ls5_A 81 EKVLAFAKSTGVT--YPLGLDPGADIFAKYALRD--------AGITRNVLIDREGKIVKLTRL 133 (159)
Confidence 6788999999998 9999999999999999742 1245589998 9999998765
No 90
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.91 E-value=4.9e-25 Score=172.64 Aligned_cols=134 Identities=15% Similarity=0.153 Sum_probs=115.5
Q ss_pred ccCCCcCCcce-----ecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-
Q psy5399 3 AQVGDTLPDAL-----LHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN- 76 (156)
Q Consensus 3 l~~G~~~P~f~-----l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d- 76 (156)
+.+|+++|+|+ +. +.+|+++++++ ++||++||+|| ++||++|+. ++|.|.+++++|++.++. |++|+.+
T Consensus 51 l~vG~~aPdF~~~~~wL~-d~dG~~vsLsd-l~GK~vLl~F~-atwC~~C~~-~~p~L~~l~~~~~~~~v~-vi~Vs~d~ 125 (352)
T 2hyx_A 51 LESCGTAPDLKGITGWLN-TPGNKPIDLKS-LRGKVVLIDFW-AYSCINCQR-AIPHVVGWYQAYKDSGLA-VIGVHTPE 125 (352)
T ss_dssp CCCCCBCCCCCSCCEEES-SGGGCCCCGGG-GTTSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHGGGTEE-EEEEECCS
T ss_pred cCCCCcCCCccccccccC-CCCCCEEcHHH-hCCCEEEEEEE-CCCChhHHH-HHHHHHHHHHHhhcCCeE-EEEEECCc
Confidence 67999999999 88 79999999999 79999999988 899999995 589999999999988898 9999864
Q ss_pred -----CHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecc
Q psy5399 77 -----DAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSL 150 (156)
Q Consensus 77 -----~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~ 150 (156)
+++.+++|+++++++ ||++.|.+..++++|++. ..|++|||| +|+|++.+.+........+.
T Consensus 126 ~~~~d~~~~~~~~~~~~~l~--fpv~~D~~~~l~~~ygV~----------~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~ 193 (352)
T 2hyx_A 126 YAFEKVPGNVAKGAANLGIS--YPIALDNNYATWTNYRNR----------YWPAEYLIDATGTVRHIKFGEGDYNVTETL 193 (352)
T ss_dssp SGGGGCHHHHHHHHHHHTCC--SCEEECTTSHHHHHTTCC----------EESEEEEECTTSBEEEEEESBCCHHHHHHH
T ss_pred ccccCCHHHHHHHHHHcCCC--ccEEeCCcHHHHHHcCCC----------ccCEEEEEeCCCeEEEEEcCCCCHHHHHHH
Confidence 689999999999999 999999999999999984 256699998 99999998875543333333
Q ss_pred hhh
Q psy5399 151 VDE 153 (156)
Q Consensus 151 ~~~ 153 (156)
+++
T Consensus 194 I~~ 196 (352)
T 2hyx_A 194 VRQ 196 (352)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 91
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.91 E-value=7.9e-24 Score=150.14 Aligned_cols=147 Identities=14% Similarity=0.096 Sum_probs=107.4
Q ss_pred cCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCC-CCCcCChhhHHHhHHHHHHcC--CCEEEEEec----C
Q psy5399 4 QVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTP-GCSVTHLPGYLAKEKDLKAKG--IHEIFCIAV----N 76 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp-~C~~~~l~~l~~~~~~~~~~~--~~~v~~is~----d 76 (156)
.+|.++|+|+|+ +.+|++++|++ ++||++||+|| .+||| +|.. +++.+.++++++++.+ +. +++||. |
T Consensus 7 P~~~~~PdF~L~-d~~G~~v~l~d-~~Gk~vll~F~-~t~Cp~~Cp~-~~~~l~~l~~~~~~~~~~v~-~v~isvDp~~D 81 (170)
T 4hde_A 7 PLNWDLETFQFT-NQDGKPFGTKD-LKGKVWVADFM-FTNCQTVCPP-MTANMAKLQKMAKEEKLDVQ-FVSFSVDPDLD 81 (170)
T ss_dssp CCCBCCCCCEEE-CTTSCEEEHHH-HTTSCEEEEEE-CTTCSSSHHH-HHHHHHHHHHHHHHTTCCCE-EEEEESCTTTC
T ss_pred CCCCcCCCcEEE-CCCCCEEeHHH-hCCCEEEEEEE-CCCCCCcccH-HHHHHHHHHHhhhcccccce-eEeeecCcccc
Confidence 368999999999 79999999999 79999999988 89998 7996 5899999999998765 45 788886 4
Q ss_pred CHHHHHHHHHHcCCCc-ceEEEecCCch-h----HHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEcc--CCCcee
Q psy5399 77 DAFVMEAWCRKNNAEG-KIRFLADPNLE-F----TKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEP--DGTGLT 147 (156)
Q Consensus 77 ~~~~~~~~~~~~~~~~-~f~~~~D~~~~-~----~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~--~~~~~~ 147 (156)
+++.+++|+++++... +|.++.+.+.. + ...|+........+.....+++|||| +|+|+..+.+. .+..+.
T Consensus 82 tp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l 161 (170)
T 4hde_A 82 KPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDI 161 (170)
T ss_dssp CHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHH
T ss_pred cHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHH
Confidence 7899999999998653 37788776532 2 22345543322222222245689999 99999988653 233344
Q ss_pred ecchhhhh
Q psy5399 148 CSLVDELK 155 (156)
Q Consensus 148 ~~~~~~~l 155 (156)
.++++.||
T Consensus 162 ~~~ik~Ll 169 (170)
T 4hde_A 162 IRDMKRLA 169 (170)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 45555554
No 92
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.91 E-value=1.6e-25 Score=157.63 Aligned_cols=130 Identities=15% Similarity=0.200 Sum_probs=108.6
Q ss_pred cCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCC-CCcCChhhHHHhHHHHHHc---CCCEEEEEecC---
Q psy5399 4 QVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPG-CSVTHLPGYLAKEKDLKAK---GIHEIFCIAVN--- 76 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~-C~~~~l~~l~~~~~~~~~~---~~~~v~~is~d--- 76 (156)
.+|+++|+|++. +.+| .+++++ ++||+++|+|| ++|||. |+. ++|.|.+++++|++. ++. |++||.|
T Consensus 11 ~~G~~~p~f~l~-~~~g-~~~l~~-~~gk~vll~f~-~~~C~~~C~~-~~~~l~~~~~~~~~~~~~~v~-vv~is~d~~~ 84 (172)
T 2k6v_A 11 LLNPKPVDFALE-GPQG-PVRLSQ-FQDKVVLLFFG-FTRCPDVCPT-TLLALKRAYEKLPPKAQERVQ-VIFVSVDPER 84 (172)
T ss_dssp EEEEEECCCEEE-CSSS-EEEGGG-STTSEEEEEEE-CTTCSSHHHH-HHHHHHHHHTTSCHHHHTTEE-EEEEESCTTT
T ss_pred ccCCCCCCeEEE-cCCC-CCcHHH-hCCCEEEEEEE-CCCCcchhHH-HHHHHHHHHHHhhhhccCCEE-EEEEEECCCC
Confidence 478999999999 7999 999999 79999888887 899997 995 589999999999765 688 9999965
Q ss_pred -CHHHHHHHHHHcCCCcceEEEecCC---chhHHhhCCeeeccC------CCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 77 -DAFVMEAWCRKNNAEGKIRFLADPN---LEFTKKLGVEHEIPV------LGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 77 -~~~~~~~~~~~~~~~~~f~~~~D~~---~~~~~~~gv~~~~~~------~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+++.+++|+++++.+ |++++|++ ..++++||+...... .+ ....|++||||+|+|++.+.+..
T Consensus 85 d~~~~~~~~~~~~~~~--~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~-i~~~P~~~lid~G~i~~~~~g~~ 157 (172)
T 2k6v_A 85 DPPEVADRYAKAFHPS--FLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYL-VDHTATTFVVKEGRLVLLYSPDK 157 (172)
T ss_dssp CCHHHHHHHHHHHCTT--EEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEE-EEECCCEEEEETTEEEEEECHHH
T ss_pred CCHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCce-EecCCEEEEEECCEEEEEECCCC
Confidence 689999999999998 99999987 689999998653211 01 12356689999999999987653
No 93
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.91 E-value=4.2e-25 Score=152.90 Aligned_cols=121 Identities=14% Similarity=0.125 Sum_probs=98.8
Q ss_pred CCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHc
Q psy5399 9 LPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKN 88 (156)
Q Consensus 9 ~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~ 88 (156)
+|++.+....+|+++++++ ++||+++|+|| ++|||+|+. ++|.|.+++++|++.++. +++|+.|+++.+++|++++
T Consensus 3 ~pa~~~~~~~~G~~~~l~~-~~gk~vlv~F~-a~wC~~C~~-~~~~l~~l~~~~~~~~v~-vv~v~~d~~~~~~~~~~~~ 78 (151)
T 3raz_A 3 LSADELAGWKDNTPQSLQS-LKAPVRIVNLW-ATWCGPCRK-EMPAMSKWYKAQKKGSVD-MVGIALDTSDNIGNFLKQT 78 (151)
T ss_dssp ----CEEETTTCCEECGGG-CCSSEEEEEEE-CTTCHHHHH-HHHHHHHHHHTSCTTTEE-EEEEESSCHHHHHHHHHHS
T ss_pred CCcchhhcccCCCEecHHH-hCCCEEEEEEE-cCcCHHHHH-HHHHHHHHHHHhccCCeE-EEEEECCChHHHHHHHHHc
Confidence 4555555237999999999 79999999888 999999996 589999999999878888 9999999999999999999
Q ss_pred CCCcceEEEecCC---chhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 89 NAEGKIRFLADPN---LEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 89 ~~~~~f~~~~D~~---~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
+++ ||++.|.+ ..++++||... . ..|++|||| +|+|++.+.+...
T Consensus 79 ~~~--~~~~~~~~~~~~~~~~~~~~~v-----~---~~P~~~lid~~G~i~~~~~g~~~ 127 (151)
T 3raz_A 79 PVS--YPIWRYTGANSRNFMKTYGNTV-----G---VLPFTVVEAPKCGYRQTITGEVN 127 (151)
T ss_dssp CCS--SCEEEECCSCHHHHHHTTTCCS-----C---CSSEEEEEETTTTEEEECCSCCC
T ss_pred CCC--CceEecCccchHHHHHHhCCcc-----C---CCCEEEEECCCCcEEEEECCCCC
Confidence 999 99998874 46888898321 1 245599998 9999999877544
No 94
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.91 E-value=2.9e-24 Score=150.99 Aligned_cols=132 Identities=18% Similarity=0.214 Sum_probs=108.5
Q ss_pred ccCCCcCCcceecccC--CCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec-CCHH
Q psy5399 3 AQVGDTLPDALLHENT--PQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV-NDAF 79 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~--~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~-d~~~ 79 (156)
+.+|+++|+|++. +. +|+.+++.++.+||++||+|| ++|||+|.. ++|.|.+++++ ++. +++|+. ++++
T Consensus 22 ~~~G~~~P~f~l~-~~~~~g~~~~~~~~~~gk~vll~F~-a~~C~~C~~-~~~~l~~l~~~----~v~-vv~v~~~~~~~ 93 (168)
T 2b1k_A 22 ALIGKPVPKFRLE-SLDNPGQFYQADVLTQGKPVLLNVW-ATWCPTCRA-EHQYLNQLSAQ----GIR-VVGMNYKDDRQ 93 (168)
T ss_dssp TTTTSBCCCCEEE-ESSSTTCEEEGGGGCCSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHT----TCC-EEEEEESCCHH
T ss_pred cccCCcCCCeEee-cccCCCcEeehhHhcCCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHC----CCE-EEEEECCCChH
Confidence 5799999999999 68 899999998558999999988 999999996 58999888764 788 999996 4688
Q ss_pred HHHHHHHHcCCCcceE-EEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCCceeecchhhh
Q psy5399 80 VMEAWCRKNNAEGKIR-FLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLVDEL 154 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~-~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~~~~ 154 (156)
..++|+++++++ |+ ++.|.+..++++||+.. .|++|||| +|+|++.+.+........+.++++
T Consensus 94 ~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~----------~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 94 KAISWLKELGNP--YALSLFDGDGMLGLDLGVYG----------APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp HHHHHHHHHCCC--CSEEEEETTCHHHHHHTCCS----------SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHH
T ss_pred HHHHHHHHcCCC--CceeeECcchHHHHHcCccc----------cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 899999999998 88 67899999999999842 45589998 999999988754433333333333
No 95
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.91 E-value=2.2e-24 Score=157.77 Aligned_cols=143 Identities=14% Similarity=0.067 Sum_probs=102.5
Q ss_pred CCCcCCcceecccCC-CceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-------
Q psy5399 5 VGDTLPDALLHENTP-QTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------- 76 (156)
Q Consensus 5 ~G~~~P~f~l~~~~~-g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------- 76 (156)
....+|+|+++ +.+ |++++|++ ++||++||+|| ++|||.| . ++|.|++++++|+++|+. |++||.|
T Consensus 13 ~~~~~pdF~l~-d~~~G~~v~Ls~-~kGKvvll~F~-At~C~~c-~-e~p~L~~l~~~~~~~g~~-vlgvs~d~f~~~e~ 86 (207)
T 2r37_A 13 ISGTIYEYGAL-TIDGEEYIPFKQ-YAGKYVLFVNV-ASYGGLT-G-QYIELNALQEELAPFGLV-ILGFPCNQFGKQEP 86 (207)
T ss_dssp --CCGGGCEEE-BTTSSCEEEGGG-GTTSEEEEEEE-CSSSTTT-T-HHHHHHHHHHHHGGGTEE-EEEEECCCBTTCCC
T ss_pred ccCccCCeEee-eCCCCCEEcHHH-hCCCEEEEEEe-CCCCCCh-H-HHHHHHHHHHHhccCCEE-EEEEECcccCcCCC
Confidence 45689999999 799 99999999 79998888887 9999999 4 499999999999999998 9999953
Q ss_pred -CHHHHHHHHH------HcCCCcceEEEecCC--chhH-HhhCCeeec-c----CCC-------------cceeeeEEEE
Q psy5399 77 -DAFVMEAWCR------KNNAEGKIRFLADPN--LEFT-KKLGVEHEI-P----VLG-------------GWRSKRYSMV 128 (156)
Q Consensus 77 -~~~~~~~~~~------~~~~~~~f~~~~D~~--~~~~-~~~gv~~~~-~----~~~-------------~~~~~~~~~i 128 (156)
+.+.+++|++ +++++ ||++.|.+ +..+ ..|+..... . ..| .....|++||
T Consensus 87 ~~~~~i~~f~~~~~~~~~~~~~--fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttfl 164 (207)
T 2r37_A 87 GENSEILPTLKYVRPGGGFVPN--FQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFL 164 (207)
T ss_dssp SCHHHHHHHHHHTSSCTTCCCS--SEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEE
T ss_pred CCHHHHHHHHHhcchhhccCcc--ceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEE
Confidence 5788999999 89998 99998754 3321 122211100 0 001 1112245999
Q ss_pred Ee-CCcEEEEEEccCCCceeecchhhhh
Q psy5399 129 VD-DGKITQLNIEPDGTGLTCSLVDELK 155 (156)
Q Consensus 129 id-~G~I~~~~~~~~~~~~~~~~~~~~l 155 (156)
|| +|+|++.+.+........+.++.+|
T Consensus 165 ID~~G~i~~~~~g~~~~~~l~~~I~~ll 192 (207)
T 2r37_A 165 VGPDGIPIMRWHHRTTVSNVKMDILSYM 192 (207)
T ss_dssp ECTTSCEEEEECTTSCHHHHHHHHHHHH
T ss_pred ECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 99 9999999876443333334444443
No 96
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.91 E-value=2.8e-24 Score=145.03 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=104.5
Q ss_pred CCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHHHHH
Q psy5399 5 VGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFVMEA 83 (156)
Q Consensus 5 ~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~ 83 (156)
+|.++|+|++. +.+|+.+++++ ++|++++|+|| ++|||+|.. .++.+.++++++. ++. +++|+.+ +.+..++
T Consensus 1 ~~~~~p~~~~~-~~~g~~~~l~~-~~~k~~ll~f~-~~~C~~C~~-~~~~l~~~~~~~~--~~~-~~~v~~~~~~~~~~~ 73 (136)
T 1zzo_A 1 TVPAQLQFSAK-TLDGHDFHGES-LLGKPAVLWFW-APWCPTCQG-EAPVVGQVAASHP--EVT-FVGVAGLDQVPAMQE 73 (136)
T ss_dssp CCCGGGCCEEE-BTTSCEEEGGG-GTTSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEECSSCHHHHHH
T ss_pred CCCCCCCcccc-cCCCCEeeHHH-hCCCeEEEEEE-cCCChhHHH-HHHHHHHHHHHcC--CeE-EEEEeCCCCHHHHHH
Confidence 57889999999 79999999999 69999999988 999999996 5899999999987 788 9999976 4899999
Q ss_pred HHHHcCC-CcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 84 WCRKNNA-EGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 84 ~~~~~~~-~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
|.+++++ + |+++.|.+..+++.||+. ..|+++++| +|+|+ .+.+...
T Consensus 74 ~~~~~~~~~--~~~~~d~~~~~~~~~~i~----------~~P~~~~id~~g~i~-~~~g~~~ 122 (136)
T 1zzo_A 74 FVNKYPVKT--FTQLADTDGSVWANFGVT----------QQPAYAFVDPHGNVD-VVRGRMS 122 (136)
T ss_dssp HHHHTTCTT--SEEEECTTCHHHHHTTCC----------SSSEEEEECTTCCEE-EEESCCC
T ss_pred HHHHcCCCc--eEEEEcCCcHHHHHcCCC----------CCceEEEECCCCCEE-EEecCCC
Confidence 9999999 6 999999999999999984 245589998 99999 6665443
No 97
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.91 E-value=4.2e-24 Score=150.30 Aligned_cols=138 Identities=15% Similarity=0.111 Sum_probs=108.0
Q ss_pred CcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCC-CCcCChhhHHHhHHHHHH----cCCCEEEEEecC----CHHH
Q psy5399 10 PDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPG-CSVTHLPGYLAKEKDLKA----KGIHEIFCIAVN----DAFV 80 (156)
Q Consensus 10 P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~-C~~~~l~~l~~~~~~~~~----~~~~~v~~is~d----~~~~ 80 (156)
|+|++. +.+|+++++++ ++||++||+|| ++||+. |.. ++|.|++++++|.+ .++. |++||.| +++.
T Consensus 7 p~f~l~-~~~G~~~~l~~-~~gk~vll~F~-~~~C~~~C~~-~~~~l~~l~~~~~~~~~~~~v~-vv~is~d~~~d~~~~ 81 (171)
T 2rli_A 7 GDFHLL-DHRGRARCKAD-FRGQWVLMYFG-FTHCPDICPD-ELEKLVQVVRQLEAEPGLPPVQ-PVFITVDPERDDVEA 81 (171)
T ss_dssp SCCEEE-ETTSCEEETTT-TTTSEEEEEEE-CTTCSSSHHH-HHHHHHHHHHHHHHSTTSCCEE-EEEEESCSTTCCHHH
T ss_pred CCeEEE-eCCCCEEeHHH-hCCCEEEEEEE-cCCCCchhHH-HHHHHHHHHHHHhhccCCCceE-EEEEEECCCCCCHHH
Confidence 999999 79999999999 79999888887 999997 996 58999999999986 4787 9999986 6899
Q ss_pred HHHHHHHcCCCcceEEEecCC---chhHHhhCCeeeccC---CC--cceeeeEEEEEe-CCcEEEEEEccCCCceeecch
Q psy5399 81 MEAWCRKNNAEGKIRFLADPN---LEFTKKLGVEHEIPV---LG--GWRSKRYSMVVD-DGKITQLNIEPDGTGLTCSLV 151 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~---~~~~~~~gv~~~~~~---~~--~~~~~~~~~iid-~G~I~~~~~~~~~~~~~~~~~ 151 (156)
+++|+++++.+ |+++.|.. ..++++||+...... .+ .....|++|||| +|+|++.+.+........+.+
T Consensus 82 ~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 159 (171)
T 2rli_A 82 MARYVQDFHPR--LLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSV 159 (171)
T ss_dssp HHHHHHTTCTT--CCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHH
T ss_pred HHHHHHHcCCC--eEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHH
Confidence 99999999998 99998753 478999998642200 00 011234689999 999999987755433334444
Q ss_pred hhh
Q psy5399 152 DEL 154 (156)
Q Consensus 152 ~~~ 154 (156)
+++
T Consensus 160 ~~l 162 (171)
T 2rli_A 160 RRH 162 (171)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 98
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.91 E-value=2.5e-24 Score=145.61 Aligned_cols=113 Identities=16% Similarity=0.158 Sum_probs=101.4
Q ss_pred CcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC-HHHHHHHH
Q psy5399 7 DTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND-AFVMEAWC 85 (156)
Q Consensus 7 ~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~ 85 (156)
.++|+|++. +.+|+.+++++ ++||+++|+|| ++||++|.. .++.+.++++++. ++. +++|+.++ ++..++|+
T Consensus 2 ~~~p~~~l~-~~~g~~~~l~~-~~~k~~lv~f~-~~~C~~C~~-~~~~l~~~~~~~~--~~~-~~~v~~~~~~~~~~~~~ 74 (136)
T 1lu4_A 2 DERLQFTAT-TLSGAPFDGAS-LQGKPAVLWFW-TPWCPFCNA-EAPSLSQVAAANP--AVT-FVGIATRADVGAMQSFV 74 (136)
T ss_dssp GGGGCCEEE-BTTSCEEEGGG-GTTSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEECSSCHHHHHHHH
T ss_pred CCCCCeEee-cCCCCeecHHH-hCCCEEEEEEE-CCcChhHHH-HHHHHHHHHHHCC--CcE-EEEEEcCCCHHHHHHHH
Confidence 468999999 79999999999 69999999998 999999996 5899999999987 788 99999875 89999999
Q ss_pred HHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEE
Q psy5399 86 RKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNI 139 (156)
Q Consensus 86 ~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~ 139 (156)
++++++ |+++.|.+..++++||+. ..|+++++| +|+|+ .+.
T Consensus 75 ~~~~~~--~~~~~d~~~~~~~~~~i~----------~~P~~~lid~~G~i~-~~~ 116 (136)
T 1lu4_A 75 SKYNLN--FTNLNDADGVIWARYNVP----------WQPAFVFYRADGTST-FVN 116 (136)
T ss_dssp HHHTCC--SEEEECTTSHHHHHTTCC----------SSSEEEEECTTSCEE-EEC
T ss_pred HHcCCC--ceEEECCchhHHHhcCCC----------CCCEEEEECCCCcEE-EEE
Confidence 999998 999999999999999984 245589998 99999 666
No 99
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.90 E-value=5.5e-24 Score=143.41 Aligned_cols=118 Identities=18% Similarity=0.266 Sum_probs=101.8
Q ss_pred cCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEE------ecCCHHHH
Q psy5399 8 TLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCI------AVNDAFVM 81 (156)
Q Consensus 8 ~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~i------s~d~~~~~ 81 (156)
++|+|++. +.+|+.+++++ ++||+++|+|| ++|||+|.. +++.+.++++++ ..++. +++| +.++.+..
T Consensus 1 ~~p~f~l~-~~~g~~~~l~~-~~gk~~lv~f~-~~~C~~C~~-~~~~l~~~~~~~-~~~~~-~v~i~~~~~~~~~~~~~~ 74 (138)
T 4evm_A 1 EVADFELM-GVDGKTYRLSD-YKGKKVYLKFW-ASWCSICLA-SLPDTDEIAKEA-GDDYV-VLTVVSPGHKGEQSEADF 74 (138)
T ss_dssp CCCCCEEE-BTTSCEEEGGG-GTTSEEEEEEC-CTTCHHHHH-HHHHHHHHHHTC-TTTEE-EEEEECTTSTTCCCHHHH
T ss_pred CCCcceeE-CCCCCEEEHHH-hCCCEEEEEEE-cCcCHHHHH-HHHHHHHHHHHh-CCCcE-EEEEEcCCCCchhhHHHH
Confidence 58999999 79999999999 79999999888 999999996 589999999884 34566 8888 44678999
Q ss_pred HHHHHHcCC-CcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 82 EAWCRKNNA-EGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 82 ~~~~~~~~~-~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
++|.+++++ + |+++.|.+..++++||+.. .|+++|+| +|+|++.+.+...
T Consensus 75 ~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~----------~P~~~lid~~G~i~~~~~g~~~ 126 (138)
T 4evm_A 75 KNWYKGLDYKN--LPVLVDPSGKLLETYGVRS----------YPTQAFIDKEGKLVKTHPGFME 126 (138)
T ss_dssp HHHHTTCCCTT--CCEEECTTCHHHHHTTCCS----------SSEEEEECTTCCEEEEEESCCC
T ss_pred HHHHhhcCCCC--eeEEECcchHHHHHcCccc----------CCeEEEECCCCcEEEeecCCCc
Confidence 999999999 6 9999999999999999842 45589998 9999999886543
No 100
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.89 E-value=1e-23 Score=145.90 Aligned_cols=122 Identities=20% Similarity=0.193 Sum_probs=102.1
Q ss_pred ccCCCcCCcceecccCCC--------ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEe
Q psy5399 3 AQVGDTLPDALLHENTPQ--------TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g--------~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is 74 (156)
+.+|+++|+|++. +.+| +.+++++ ++|++++|+|| ++|||+|.. .+|.|.+++++ .++. +++|+
T Consensus 8 ~~~g~~~p~f~l~-~~~g~~~~~~~~~~~~l~~-~~gk~~ll~f~-~~~C~~C~~-~~~~l~~l~~~---~~v~-~v~v~ 79 (156)
T 1kng_A 8 ALIGRPAPQTALP-PLEGLQADNVQVPGLDPAA-FKGKVSLVNVW-ASWCVPCHD-EAPLLTELGKD---KRFQ-LVGIN 79 (156)
T ss_dssp ----CBCCCCCBC-CCTTCEETTEECCCBCGGG-GTTSCEEEEEE-CTTCHHHHH-HHHHHHHHTTC---TTSE-EEEEE
T ss_pred HHhCCCCCCceee-eccCcccccccCceechHH-hCCCEEEEEEE-cccCHhHHH-HHHHHHHHHhc---CCeE-EEEEE
Confidence 6799999999999 7998 9999999 78999999888 899999995 58999988866 3577 99999
Q ss_pred cC-CHHHHHHHHHHcCCCcceE-EEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCCC
Q psy5399 75 VN-DAFVMEAWCRKNNAEGKIR-FLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDGT 144 (156)
Q Consensus 75 ~d-~~~~~~~~~~~~~~~~~f~-~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~~ 144 (156)
.+ +++..++|+++++++ |+ ++.|.+..+++.||+. ..|++|++| +|+|++...+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~----------~~P~~~~id~~G~i~~~~~g~~~~ 140 (156)
T 1kng_A 80 YKDAADNARRFLGRYGNP--FGRVGVDANGRASIEWGVY----------GVPETFVVGREGTIVYKLVGPITP 140 (156)
T ss_dssp ESCCHHHHHHHHHHHCCC--CSEEEEETTSHHHHHTTCC----------SSCEEEEECTTSBEEEEEESCCCH
T ss_pred CCCCHHHHHHHHHHcCCC--CceeeeCchhHHHHhcCcC----------ccCeEEEEcCCCCEEEEEeCCCCH
Confidence 64 688999999999999 98 8899999999999984 245589998 99999988765443
No 101
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.87 E-value=2.7e-23 Score=142.56 Aligned_cols=119 Identities=16% Similarity=0.185 Sum_probs=100.9
Q ss_pred CCCcCCc-ceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH-cCCCEEEEEecC-CHHHH
Q psy5399 5 VGDTLPD-ALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA-KGIHEIFCIAVN-DAFVM 81 (156)
Q Consensus 5 ~G~~~P~-f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~-~~~~~v~~is~d-~~~~~ 81 (156)
.|+.+|+ |++. +.+|+.+++++ ++||+++|+|| ++|||+|+. ++|.|.++++++++ .++. |++|+.| +.+..
T Consensus 3 ~~~~~P~~f~l~-~~~g~~~~l~~-~~gk~vll~F~-a~wC~~C~~-~~~~l~~l~~~~~~~~~~~-vv~v~~d~~~~~~ 77 (144)
T 1i5g_A 3 LKKFFPYSTNVL-KGAAADIALPS-LAGKTVFFYFS-ASWCPPSRA-FTPQLIDFYKAHAEKKNFE-VMLISWDESAEDF 77 (144)
T ss_dssp TTTSCSSCSEEE-ETTEEEEEGGG-GTTSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTTTTTEE-EEEEECCSSHHHH
T ss_pred hhhhCCCceEEE-cCCCCEecHHH-cCCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHhccCCCEE-EEEEeCCCCHHHH
Confidence 5899999 9999 79999999999 79999888888 899999995 58999999999985 6788 9999988 68889
Q ss_pred HHHHHHcCCCcceEEEe-cCCchhHHhhCCeeeccCCCcceeeeEEEEEe--CCcEEEEEE
Q psy5399 82 EAWCRKNNAEGKIRFLA-DPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD--DGKITQLNI 139 (156)
Q Consensus 82 ~~~~~~~~~~~~f~~~~-D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid--~G~I~~~~~ 139 (156)
++|++++++.. ||++. |.+..++++||+. ..|+++|+| +|+|++...
T Consensus 78 ~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~----------~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 78 KDYYAKMPWLA-LPFEDRKGMEFLTTGFDVK----------SIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp HHHHTTCSSEE-CCTTCHHHHHHHHHHTTCC----------SSSEEEEEETTTCCEEESCH
T ss_pred HHHHHhCCccc-cccCchHHHHHHHHHcCCC----------CCCEEEEEECCCCcEEeccc
Confidence 99999988632 77665 5568899999984 244589997 999998764
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.86 E-value=5.3e-23 Score=141.49 Aligned_cols=120 Identities=15% Similarity=0.240 Sum_probs=100.6
Q ss_pred ccCCCcCCc-ceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH-cCCCEEEEEecC-CHH
Q psy5399 3 AQVGDTLPD-ALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA-KGIHEIFCIAVN-DAF 79 (156)
Q Consensus 3 l~~G~~~P~-f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~-~~~~~v~~is~d-~~~ 79 (156)
...|+.+|+ |++. +.+| .+++++ ++||+++|+|| ++||++|+. ++|.|.++++++++ .++. |++|+.| +.+
T Consensus 2 ~~~~~~~P~~f~l~-~~~g-~~~l~~-~~gk~vll~F~-a~wC~~C~~-~~p~l~~l~~~~~~~~~~~-vv~v~~d~~~~ 75 (146)
T 1o8x_A 2 SGLDKYLPGIEKLR-RGDG-EVEVKS-LAGKLVFFYFS-ASWCPPARG-FTPQLIEFYDKFHESKNFE-VVFCTWDEEED 75 (146)
T ss_dssp -CGGGTSTTCCEEE-ETTE-EEEGGG-GTTCEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTTTTTEE-EEEEECCCSHH
T ss_pred cchHhhCCCceEEE-cCCC-CCcHHH-hCCCEEEEEEE-ccCCHHHHH-HHHHHHHHHHHhhhcCCeE-EEEEeCCCCHH
Confidence 367899999 9999 7999 999999 79999998888 899999996 58999999999984 6787 9999988 578
Q ss_pred HHHHHHHHcCCCcceEEEe-cCCchhHHhhCCeeeccCCCcceeeeEEEEEe--CCcEEEEEE
Q psy5399 80 VMEAWCRKNNAEGKIRFLA-DPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD--DGKITQLNI 139 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~-D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid--~G~I~~~~~ 139 (156)
..++|++++++.. |+++. |.+..++++||+. ..|+++|+| +|+|++...
T Consensus 76 ~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~----------~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 76 GFAGYFAKMPWLA-VPFAQSEAVQKLSKHFNVE----------SIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp HHHHHHTTCSSEE-CCGGGHHHHHHHHHHTTCC----------SSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHHCCcee-eccchhhHHHHHHHHhCCC----------CCCEEEEEECCCCeEEEecc
Confidence 8999999988532 77665 6567899999984 245589998 999999864
No 103
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.86 E-value=3.1e-23 Score=144.73 Aligned_cols=121 Identities=14% Similarity=0.156 Sum_probs=102.0
Q ss_pred CCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------CH
Q psy5399 5 VGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------DA 78 (156)
Q Consensus 5 ~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------~~ 78 (156)
+|+.+| ++. +.+|+.+++++ ++||+++|+|| ++|||+|+. ++|.|.+++++|+..++. |++|+.+ +.
T Consensus 16 ~~~~~p--~l~-~~~g~~~~~~~-~~gk~vlv~F~-a~~C~~C~~-~~~~l~~l~~~~~~~~~~-vv~v~~~~~~~~~~~ 88 (164)
T 2h30_A 16 VPHTMS--TMK-TADNRPASVYL-KKDKPTLIKFW-ASWCPLCLS-ELGQAEKWAQDAKFSSAN-LITVASPGFLHEKKD 88 (164)
T ss_dssp HHHHHT--TCE-ETTSSBGGGGC-CTTSCEEEEEC-CTTCHHHHH-HHHHHHHHHTCGGGTTSE-EEEEECTTSTTCCCT
T ss_pred cCCcCC--ccC-CCCCCEeeHHH-hCCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHcccCCcE-EEEEEcCCCccccCH
Confidence 344455 788 79999999999 79999999998 999999996 589999999999888998 9999964 46
Q ss_pred HHHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 79 FVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 79 ~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
+..++|.++++++. |++..|.+..++++||+. ..|++||+| +|+|++.+.+...
T Consensus 89 ~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~g~~~ 143 (164)
T 2h30_A 89 GEFQKWYAGLNYPK-LPVVTDNGGTIAQNLNIS----------VYPSWALIGKDGDVQRIVKGSIN 143 (164)
T ss_dssp THHHHHHTTSCCTT-SCEEECTTCHHHHHTTCC----------SSSEEEEECTTSCEEEEEESCCC
T ss_pred HHHHHHHHhCCCCc-ceEEEcCchHHHHHcCCC----------ccceEEEECCCCcEEEEEcCCCC
Confidence 77888888877765 889999999999999984 245589998 9999999877443
No 104
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.86 E-value=1.3e-23 Score=148.14 Aligned_cols=121 Identities=20% Similarity=0.246 Sum_probs=100.2
Q ss_pred CccCCCcCCcc-eecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH-cCCCEEEEEecCC-H
Q psy5399 2 CAQVGDTLPDA-LLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA-KGIHEIFCIAVND-A 78 (156)
Q Consensus 2 ~l~~G~~~P~f-~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~-~~~~~v~~is~d~-~ 78 (156)
+..+|+++|+| ++. +.+| .++|++ ++||++||+|| ++|||+|+. ++|.|.+++++|++ .++. |++|+.|+ .
T Consensus 21 ~~~vG~~~P~f~~l~-~~~g-~v~l~~-~~gk~vll~F~-a~wC~~C~~-~~p~l~~l~~~~~~~~~v~-vv~v~~d~~~ 94 (165)
T 3s9f_A 21 MSGVAKHLGEALKLR-KQAD-TADMDS-LSGKTVFFYFS-ASWCPPCRG-FTPQLVEFYEKHHDSKNFE-IILASWDEEE 94 (165)
T ss_dssp -CHHHHHHHHTSCEE-ETTE-EECSGG-GTTSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTTTTTEE-EEEEECCCSH
T ss_pred hhhhcccCCcceeee-cCCC-cccHHH-cCCCEEEEEEE-CCcChhHHH-HHHHHHHHHHHhccCCCeE-EEEEecCCCH
Confidence 35689999999 999 7999 999999 79999988888 999999995 58999999999986 6788 99999874 5
Q ss_pred HHHHHHHHHcCCCcceEEEecCC-chhHHhhCCeeeccCCCcceeeeEEEEEe-C-CcEEEEEE
Q psy5399 79 FVMEAWCRKNNAEGKIRFLADPN-LEFTKKLGVEHEIPVLGGWRSKRYSMVVD-D-GKITQLNI 139 (156)
Q Consensus 79 ~~~~~~~~~~~~~~~f~~~~D~~-~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~-G~I~~~~~ 139 (156)
+..++|.+++++.. +++..+.. ..++++||+. ..|++|||| + |+|++...
T Consensus 95 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~v~----------~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 95 DDFNAYYAKMPWLS-IPFANRNIVEALTKKYSVE----------SIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp HHHHHHHTTCSSEE-CCTTCHHHHHHHHHHTTCC----------SSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHHhCCCcc-cccCchhHHHHHHHHcCCC----------CCCEEEEEeCCCCEEEeccc
Confidence 88889999887532 66555444 7899999984 245589998 7 99998754
No 105
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.86 E-value=8.2e-23 Score=139.88 Aligned_cols=121 Identities=19% Similarity=0.270 Sum_probs=100.0
Q ss_pred CccCCCcCCcc-eecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHH-HcCCCEEEEEecC-CH
Q psy5399 2 CAQVGDTLPDA-LLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLK-AKGIHEIFCIAVN-DA 78 (156)
Q Consensus 2 ~l~~G~~~P~f-~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~-~~~~~~v~~is~d-~~ 78 (156)
|...|+.+|+| ++. +.+| .+++++ ++||+++|+|| ++|||+|+. ++|.|.+++++++ +.++. |++|+.| +.
T Consensus 1 m~~~g~~~p~~~~l~-~~~g-~~~l~~-~~gk~vll~F~-a~wC~~C~~-~~~~l~~l~~~~~~~~~~~-vv~i~~d~~~ 74 (144)
T 1o73_A 1 MSGLAKYLPGATNLL-SKSG-EVSLGS-LVGKTVFLYFS-ASWCPPCRG-FTPVLAEFYEKHHVAKNFE-VVLISWDENE 74 (144)
T ss_dssp CCGGGGTSCTTCCBB-CTTS-CBCSGG-GTTCEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTTTTTEE-EEEEECCSSH
T ss_pred CcchhhhCccceEee-cCCC-cCcHHH-hCCCEEEEEEE-CcCCHHHHH-HHHHHHHHHHHhccCCCEE-EEEEeCCCCH
Confidence 45789999998 999 7999 999999 79999988887 899999996 5899999999997 46787 9999988 46
Q ss_pred HHHHHHHHHcCCCcceEEEe-cCCchhHHhhCCeeeccCCCcceeeeEEEEEe--CCcEEEEEE
Q psy5399 79 FVMEAWCRKNNAEGKIRFLA-DPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD--DGKITQLNI 139 (156)
Q Consensus 79 ~~~~~~~~~~~~~~~f~~~~-D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid--~G~I~~~~~ 139 (156)
+..++|.+++++.. +++.. |.+..++++||+. ..|+++|+| +|+|++...
T Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~----------~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 75 SDFHDYYGKMPWLA-LPFDQRSTVSELGKTFGVE----------SIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp HHHHHHHTTCSSEE-CCTTCHHHHHHHHHHHTCC----------SSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHHhCCceE-eeccchhHHHHHHHHcCCC----------CCCEEEEEECCCCeEEecch
Confidence 78889999887532 66554 5567899999984 245589998 999998753
No 106
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.77 E-value=2e-23 Score=142.54 Aligned_cols=123 Identities=15% Similarity=0.234 Sum_probs=99.7
Q ss_pred CcCCcceecccCCCceeehhhHhCCC-eEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH--cCCCEEEEEecC-CHHHHH
Q psy5399 7 DTLPDALLHENTPQTKIQIADAIKGK-KVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA--KGIHEIFCIAVN-DAFVME 82 (156)
Q Consensus 7 ~~~P~f~l~~~~~g~~~~l~~~~~gk-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~--~~~~~v~~is~d-~~~~~~ 82 (156)
+.+|+|++. +.+|+.+++++.++|| +++|+|| ++|||+|+. ++|.|.++++++++ .++. +++|+.| +++..+
T Consensus 2 ~~~p~~~l~-~~~g~~~~l~~~~~gk~~vll~F~-a~wC~~C~~-~~~~l~~~~~~~~~~~~~~~-v~~v~~d~~~~~~~ 77 (143)
T 2lus_A 2 EFIQGIKLV-KKNRCEVNANEALKDKDIIGFYFS-AHWCPPCRG-FTPILADMYSELVDDSAPFE-IIFVSSDRSEDDMF 77 (143)
Confidence 468999999 7999999999955898 8888887 899999995 58999999999953 4788 9999987 567888
Q ss_pred HHHHHcCCCc-ceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 83 AWCRKNNAEG-KIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 83 ~~~~~~~~~~-~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
+|+++++++. .+++..|.+..++++||+. ..|+++|+| +|+|++.....+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~~~~~ 130 (143)
T 2lus_A 78 QYMMESHGDWLAIPYRSGPASNVTAKYGIT----------GIPALVIVKKDGTLISMNGRGEV 130 (143)
Confidence 9999998772 1445566667899999984 245589999 9999998654433
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.43 E-value=2.2e-14 Score=95.82 Aligned_cols=99 Identities=11% Similarity=0.113 Sum_probs=74.4
Q ss_pred CcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHH
Q psy5399 7 DTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCR 86 (156)
Q Consensus 7 ~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~ 86 (156)
+.+++++.. +.+|....... .+|++++|.|| ++||++|.. ..|.+.++++++. .++. ++.|+.+
T Consensus 4 ~~~~~l~~~-~~~~~~~~~~~-~~~k~~lv~f~-a~wC~~C~~-~~~~l~~~~~~~~-~~v~-~~~v~~~---------- 67 (126)
T 2l57_A 4 EGIKQINFQ-SINVVENLEEA-KEGIPTIIMFK-TDTCPYCVE-MQKELSYVSKERE-GKFN-IYYARLE---------- 67 (126)
T ss_dssp CCSSCTTTT-CCSEESSTTTC-CSSSCEEEEEE-CSSCHHHHH-HHHHHHHHHHHSS-SSCE-EEEEETT----------
T ss_pred cccCCCCcc-ccchhHHHHHH-hCCCcEEEEEE-CCCCccHHH-HHHHHHHHHHHhc-CCeE-EEEEeCC----------
Confidence 457777777 57766655555 57888888887 999999996 4799999998886 5677 8888854
Q ss_pred HcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 87 KNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 87 ~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
.|.+..++++||+. ..|++++++ +|+++....+..
T Consensus 68 -----------~d~~~~~~~~~~v~----------~~Pt~~~~~~~G~~~~~~~G~~ 103 (126)
T 2l57_A 68 -----------EEKNIDLAYKYDAN----------IVPTTVFLDKEGNKFYVHQGLM 103 (126)
T ss_dssp -----------SSHHHHHHHHTTCC----------SSSEEEEECTTCCEEEEEESCC
T ss_pred -----------CCchHHHHHHcCCc----------ceeEEEEECCCCCEEEEecCCC
Confidence 23345688888884 244588999 999999877643
No 108
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.40 E-value=8.3e-15 Score=101.74 Aligned_cols=108 Identities=9% Similarity=0.015 Sum_probs=75.7
Q ss_pred cCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhH---HHhHHHHHHcCCCEEEEEecCCHHH
Q psy5399 4 QVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGY---LAKEKDLKAKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~~~~v~~is~d~~~~ 80 (156)
..+...+++ . ..++.+++++ .+||+++|+||.++||++|+. .+|.+ .++.+.+. .++. ++.|+.+...
T Consensus 25 ~~~~~~~~~--~--~~~~~~~~a~-~~gk~vlv~F~ga~wC~~C~~-~~p~l~~~~~~~~~~~-~~~~-~v~vd~~~~~- 95 (154)
T 2ju5_A 25 PIAAANLQW--E--SYAEALEHSK-QDHKPIGLFFTGSDWCMWCIK-MQDQILQSSEFKHFAG-VHLH-MVEVDFPQKN- 95 (154)
T ss_dssp SSCCCCCCE--E--CHHHHHHHHH-HHCCCEEEEEECTTTCHHHHH-HHHHTTTSHHHHHHHH-HHCE-EEEEECCSSC-
T ss_pred hcccCCCCC--C--CHHHHHHHHH-hCCCeEEEEEeCCCCCHhHHH-HHHHHhcCHHHHHHhc-CcEE-EEEecCcccc-
Confidence 344455555 2 3467788888 689999999887899999995 57998 56654443 3566 7777765432
Q ss_pred HHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 81 MEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 81 ~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
+++ ++ +.|.+..++++|++. ..|+++++| +|++++.. +..
T Consensus 96 --------~~~--~~-~~~~~~~l~~~~~v~----------~~Pt~~~~d~~G~~~~~~-G~~ 136 (154)
T 2ju5_A 96 --------HQP--EE-QRQKNQELKAQYKVT----------GFPELVFIDAEGKQLARM-GFE 136 (154)
T ss_dssp --------CCC--HH-HHHHHHHHHHHTTCC----------SSSEEEEECTTCCEEEEE-CCC
T ss_pred --------CCC--hh-hHhhHHHHHHHcCCC----------CCCEEEEEcCCCCEEEEe-cCC
Confidence 244 44 356667899999984 245589998 99999987 543
No 109
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.36 E-value=1e-14 Score=98.90 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=71.0
Q ss_pred cCCCcCCcce-ecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhH---HHhHHHHHHcCCCEEEEEecCCHH
Q psy5399 4 QVGDTLPDAL-LHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGY---LAKEKDLKAKGIHEIFCIAVNDAF 79 (156)
Q Consensus 4 ~~G~~~P~f~-l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~~~~v~~is~d~~~ 79 (156)
..|..+|.|+ +. +.++....+++ .+|++++|+|| ++||++|+.. .+.+ .++.+++. ++. ++.|+.+..
T Consensus 5 ~~~~~~~~f~~~~-~~~~~~~~l~~-~~~k~vlv~F~-a~wC~~C~~~-~~~~~~~~~l~~~~~--~~~-~~~vd~~~~- 76 (134)
T 2fwh_A 5 AQTQTHLNFTQIK-TVDELNQALVE-AKGKPVMLDLY-ADWCVACKEF-EKYTFSDPQVQKALA--DTV-LLQANVTAN- 76 (134)
T ss_dssp -----CCCCEECC-SHHHHHHHHHH-HTTSCEEEEEE-CTTCHHHHHH-HHHTTTSHHHHHHTT--TSE-EEEEECTTC-
T ss_pred cccccCCCcEEec-CHHHHHHHHHH-hcCCcEEEEEE-CCCCHHHHHH-HHHhcCCHHHHHHhc--CcE-EEEEeCCCC-
Confidence 4678899998 55 67777888888 68999999988 9999999953 5777 77777775 577 888887642
Q ss_pred HHHHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEE--EEEEc
Q psy5399 80 VMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKIT--QLNIE 140 (156)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~--~~~~~ 140 (156)
.|.+..++++||+. ..|+++++| +|+++ +...+
T Consensus 77 ------------------~~~~~~l~~~~~v~----------~~Pt~~~~d~~G~~v~~~~~~G 112 (134)
T 2fwh_A 77 ------------------DAQDVALLKHLNVL----------GLPTILFFDGQGQEHPQARVTG 112 (134)
T ss_dssp ------------------CHHHHHHHHHTTCC----------SSSEEEEECTTSCBCGGGCBCS
T ss_pred ------------------cchHHHHHHHcCCC----------CCCEEEEECCCCCEeeeeeeee
Confidence 12345677888874 244588887 99987 44444
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.28 E-value=2.2e-12 Score=86.47 Aligned_cols=96 Identities=9% Similarity=0.165 Sum_probs=66.8
Q ss_pred CCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHH
Q psy5399 5 VGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAW 84 (156)
Q Consensus 5 ~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~ 84 (156)
...++|+++ ..+++.++... .+|++++|.|| ++||++|+. ..|.+.++++++++ ++. ++.|+.+
T Consensus 20 ~~~~~~~~~---~~~~~~~~~~~-~~~k~vlv~F~-a~wC~~C~~-~~p~l~~~~~~~~~-~v~-~~~vd~d-------- 83 (128)
T 3ul3_B 20 MFKKVPRLQ---QNGSNIINGVN-MKNTVIVLYFF-AKWCQACTM-QSTEMDKLQKYYGK-RIY-LLKVDLD-------- 83 (128)
T ss_dssp ------CCC---CCCCSSSSBTT-SCCSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHGG-GEE-EEEEEGG--------
T ss_pred HhccCCccc---cCCccHHHHHH-ccCCEEEEEEE-CCCCHHHHH-HhHHHHHHHHHhcC-CeE-EEEEECC--------
Confidence 345566655 34566677777 68898888888 999999996 57999999999863 455 6666643
Q ss_pred HHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 85 CRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 85 ~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
.+..++++||+.. .|+++++++|+++....+.
T Consensus 84 ---------------~~~~l~~~~~v~~----------~Pt~~~~~~G~~~~~~~G~ 115 (128)
T 3ul3_B 84 ---------------KNESLARKFSVKS----------LPTIILLKNKTMLARKDHF 115 (128)
T ss_dssp ---------------GCHHHHHHTTCCS----------SSEEEEEETTEEEEEESSC
T ss_pred ---------------CCHHHHHHcCCCC----------cCEEEEEECCEEEEEecCC
Confidence 3347888898842 4447777999998877653
No 111
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.26 E-value=3.5e-12 Score=86.52 Aligned_cols=86 Identities=16% Similarity=0.223 Sum_probs=64.4
Q ss_pred cCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEE
Q psy5399 17 NTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRF 96 (156)
Q Consensus 17 ~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~ 96 (156)
+.+|...++++ .+|++++|.|| ++||++|.. ..|.+.++++++.+ .+. ++.|..+
T Consensus 38 ~~~~~~~~l~~-~~~k~vlv~f~-a~wC~~C~~-~~~~~~~~~~~~~~-~~~-~~~v~~~-------------------- 92 (141)
T 3hxs_A 38 DYENHSKEWKY-LGDKPAIVDFY-ADWCGPCKM-VAPILEELSKEYAG-KIY-IYKVNVD-------------------- 92 (141)
T ss_dssp CCSSCCCCCCC-CCSSCEEEEEE-CTTCTTHHH-HHHHHHHHHHHTTT-TCE-EEEEETT--------------------
T ss_pred ccccchhHHHH-hCCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHhcC-ceE-EEEEECC--------------------
Confidence 45677788887 68899999988 999999996 47999999998864 355 6666654
Q ss_pred EecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEcc
Q psy5399 97 LADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEP 141 (156)
Q Consensus 97 ~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~ 141 (156)
.+..++++||+. ..|++++++ +|+++ ...+.
T Consensus 93 ---~~~~~~~~~~v~----------~~Pt~~~~~~~g~~~-~~~G~ 124 (141)
T 3hxs_A 93 ---KEPELARDFGIQ----------SIPTIWFVPMKGEPQ-VNMGA 124 (141)
T ss_dssp ---TCHHHHHHTTCC----------SSSEEEEECSSSCCE-EEESC
T ss_pred ---CCHHHHHHcCCC----------CcCEEEEEeCCCCEE-EEeCC
Confidence 345688889884 244488887 99987 44443
No 112
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.18 E-value=3.2e-12 Score=85.45 Aligned_cols=88 Identities=10% Similarity=0.172 Sum_probs=60.4
Q ss_pred CceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhH---HHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEE
Q psy5399 20 QTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGY---LAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRF 96 (156)
Q Consensus 20 g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~ 96 (156)
.+.+++++ .+|++++|.|| ++||++|.. ..|.+ ..+.+.+. .++. ++.|..+.
T Consensus 17 ~~~~~~~~-~~~k~vlv~f~-a~wC~~C~~-~~~~~~~~~~~~~~~~-~~~~-~~~vd~~~------------------- 72 (130)
T 2kuc_A 17 PEALKRAE-VEDKLLFVDCF-TTWCGPCKR-LSKVVFKDSLVADYFN-RHFV-NLKMDMEK------------------- 72 (130)
T ss_dssp HHHHHHHH-HHSSCEEEEEC-CTTCTHHHH-HHHHGGGCHHHHHHHH-HHSE-EEEECSSS-------------------
T ss_pred HHHHHHHH-hcCCeEEEEEE-CCCCccHHH-HHHHhcCcHHHHHHHh-cCeE-EEEEecCC-------------------
Confidence 34566666 47889999988 999999995 46877 44444443 2344 55565553
Q ss_pred EecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccCC
Q psy5399 97 LADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPDG 143 (156)
Q Consensus 97 ~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~~ 143 (156)
|.+..++++||+. ..|+++++| +|++++...+...
T Consensus 73 --~~~~~~~~~~~v~----------~~Pt~~~~d~~G~~~~~~~G~~~ 108 (130)
T 2kuc_A 73 --GEGVELRKKYGVH----------AYPTLLFINSSGEVVYRLVGAED 108 (130)
T ss_dssp --TTHHHHHHHTTCC----------SSCEEEEECTTSCEEEEEESCCC
T ss_pred --cchHHHHHHcCCC----------CCCEEEEECCCCcEEEEecCCCC
Confidence 3446788899884 245588898 9999998776543
No 113
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.18 E-value=1.1e-11 Score=84.83 Aligned_cols=99 Identities=10% Similarity=0.141 Sum_probs=71.9
Q ss_pred CCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHH
Q psy5399 5 VGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAW 84 (156)
Q Consensus 5 ~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~ 84 (156)
.|.++|+..+. ..++..+.-.- .++++++|.|| ++||++|+. ..|.+.++++++.. .+. ++.|+.+
T Consensus 31 ~~~~~~~~~v~-~l~~~~~~~~~-~~~k~vlv~F~-a~wC~~C~~-~~p~l~~~~~~~~~-~~~-~~~vd~~-------- 96 (148)
T 3p2a_A 31 CGHSLFDGEVI-NATAETLDKLL-QDDLPMVIDFW-APWCGPCRS-FAPIFAETAAERAG-KVR-FVKVNTE-------- 96 (148)
T ss_dssp TCCBTTCCCCE-ECCTTTHHHHT-TCSSCEEEEEE-CSSCHHHHH-HHHHHHHHHHHTTT-TCE-EEEEETT--------
T ss_pred cCCccccCCce-ecCHHHHHHHH-hcCCcEEEEEE-CCCCHHHHH-HHHHHHHHHHHcCC-ceE-EEEEECc--------
Confidence 46667777777 57777666544 46788888888 999999996 47999999988853 365 7777664
Q ss_pred HHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 85 CRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 85 ~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
.+..++++|++.. .|+++++++|+++..+.+..
T Consensus 97 ---------------~~~~l~~~~~v~~----------~Pt~~~~~~G~~~~~~~G~~ 129 (148)
T 3p2a_A 97 ---------------AEPALSTRFRIRS----------IPTIMLYRNGKMIDMLNGAV 129 (148)
T ss_dssp ---------------TCHHHHHHTTCCS----------SSEEEEEETTEEEEEESSCC
T ss_pred ---------------CCHHHHHHCCCCc----------cCEEEEEECCeEEEEEeCCC
Confidence 3446888888842 34467778999998776543
No 114
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.17 E-value=6e-11 Score=77.49 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=59.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|.. ..|.+.++++++.+ ++. ++.|+.+. +..++++||
T Consensus 16 ~~~~~lv~f~-a~wC~~C~~-~~~~l~~~~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~ 68 (112)
T 2voc_A 16 SEGVVLADFW-APWCGPSKM-IAPVLEELDQEMGD-KLK-IVKIDVDE-----------------------NQETAGKYG 68 (112)
T ss_dssp SSSEEEEEEE-CTTBGGGGG-HHHHHHHHHHHHTT-TCE-EEEEETTT-----------------------CCSHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHhCC-CcE-EEEEECCC-----------------------CHHHHHHcC
Confidence 6788888887 899999996 47999999998864 466 88777642 356889999
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.. .|+++++.+|+++....+...
T Consensus 69 v~~----------~Pt~~~~~~G~~~~~~~G~~~ 92 (112)
T 2voc_A 69 VMS----------IPTLLVLKDGEVVETSVGFKP 92 (112)
T ss_dssp CCS----------BSEEEEEETTEEEEEEESCCC
T ss_pred CCc----------ccEEEEEeCCEEEEEEeCCCC
Confidence 842 444777799999988776543
No 115
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.17 E-value=9.8e-12 Score=83.53 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=61.2
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHH--HhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHH
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYL--AKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTK 106 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~--~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~ 106 (156)
.+|++++|+|| ++||++|+. ..|.|. ++.+++.+ ++. ++.|+.++ .|.+..+++
T Consensus 27 ~~~k~vlv~f~-a~wC~~C~~-~~~~l~~~~~~~~~~~-~~~-~~~vd~~~--------------------~~~~~~l~~ 82 (133)
T 3fk8_A 27 RTHKPTLLVFG-ANWCTDCRA-LDKSLRNQKNTALIAK-HFE-VVKIDVGN--------------------FDRNLELSQ 82 (133)
T ss_dssp HHTCCEEEEEE-CTTCHHHHH-HHHHHTSHHHHHHHHH-HCE-EEEEECTT--------------------TTSSHHHHH
T ss_pred hcCCcEEEEEc-CCCCHHHHH-HHHHhCCHHHHHHhcC-CEE-EEEEeCCc--------------------ccchHHHHH
Confidence 35888988887 999999996 479999 88888864 477 88888763 245567888
Q ss_pred hhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 107 KLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 107 ~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
+||+... ...|+++++| +|++++...+
T Consensus 83 ~~~v~~~-------~~~Pt~~~~d~~G~~~~~~~g 110 (133)
T 3fk8_A 83 AYGDPIQ-------DGIPAVVVVNSDGKVRYTTKG 110 (133)
T ss_dssp HTTCGGG-------GCSSEEEEECTTSCEEEECCS
T ss_pred HhCCccC-------CccceEEEECCCCCEEEEecC
Confidence 8887210 1245588898 9999999776
No 116
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.13 E-value=1.3e-11 Score=81.33 Aligned_cols=74 Identities=8% Similarity=0.032 Sum_probs=56.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|+. ..|.+.++++++. ++. ++.|..+ .+..++++||
T Consensus 30 ~~k~vlv~F~-a~wC~~C~~-~~p~l~~l~~~~~--~v~-~~~vd~d-----------------------~~~~l~~~~~ 81 (116)
T 3qfa_C 30 GDKLVVVDFS-ATWCGPSKM-IKPFFHSLSEKYS--NVI-FLEVDVD-----------------------DCQDVASECE 81 (116)
T ss_dssp TTSCEEEEEE-CTTCHHHHH-HHHHHHHHHTTCT--TSE-EEEEETT-----------------------TTHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHCC--CCE-EEEEECC-----------------------CCHHHHHHcC
Confidence 6888888888 999999996 4799999998876 366 7777764 2456888888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+.. .|+++++++|+++....+.
T Consensus 82 v~~----------~Pt~~~~~~G~~~~~~~G~ 103 (116)
T 3qfa_C 82 VKS----------MPTFQFFKKGQKVGEFSGA 103 (116)
T ss_dssp CCS----------SSEEEEESSSSEEEEEESC
T ss_pred Ccc----------ccEEEEEeCCeEEEEEcCC
Confidence 842 3446666799998887765
No 117
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.12 E-value=4.2e-11 Score=76.81 Aligned_cols=78 Identities=15% Similarity=0.110 Sum_probs=58.5
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
.++++++|.|| ++|||+|.. ..|.+.++++++.+. +. ++.|+.+ .+..++++|
T Consensus 17 ~~~~~~lv~f~-~~~C~~C~~-~~~~~~~~~~~~~~~-~~-~~~v~~~-----------------------~~~~~~~~~ 69 (106)
T 3die_A 17 VESGVQLVDFW-ATACGPCKM-IAPVLEELAADYEGK-AD-ILKLDVD-----------------------ENPSTAAKY 69 (106)
T ss_dssp SCSSEEEEEEE-CSBCHHHHH-HHHHHHHHHHHTTTT-CE-EEEEETT-----------------------TCHHHHHHT
T ss_pred hcCCcEEEEEE-CCCCHHHHH-HhHHHHHHHHHhcCC-cE-EEEEECC-----------------------cCHHHHHhC
Confidence 36788888887 999999996 479999999988743 66 7777764 345677888
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
++.. .|+++++++|+++....+...
T Consensus 70 ~v~~----------~Pt~~~~~~G~~~~~~~g~~~ 94 (106)
T 3die_A 70 EVMS----------IPTLIVFKDGQPVDKVVGFQP 94 (106)
T ss_dssp TCCS----------BSEEEEEETTEEEEEEESCCC
T ss_pred CCcc----------cCEEEEEeCCeEEEEEeCCCC
Confidence 8842 444777789999988776443
No 118
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.11 E-value=4.8e-11 Score=77.58 Aligned_cols=77 Identities=18% Similarity=0.198 Sum_probs=56.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++|||+|.. ..|.+.++++++.+ .+. ++.|+.+. +..++++||
T Consensus 22 ~~~~~vv~f~-~~~C~~C~~-~~~~l~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 74 (112)
T 1t00_A 22 NDKPVLVDFW-AAWCGPCRQ-IAPSLEAIAAEYGD-KIE-IVKLNIDE-----------------------NPGTAAKYG 74 (112)
T ss_dssp CSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTT-TCE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHhHHh-cCHHHHHHHHHhcC-CeE-EEEEEcCC-----------------------CHHHHHhCC
Confidence 4677888887 999999996 47999999988854 366 77777553 346788888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.. .|+++++.+|+++....+...
T Consensus 75 v~~----------~Pt~~~~~~G~~~~~~~G~~~ 98 (112)
T 1t00_A 75 VMS----------IPTLNVYQGGEVAKTIVGAKP 98 (112)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESCCC
T ss_pred CCc----------ccEEEEEeCCEEEEEEeCCCC
Confidence 842 333555579999988776543
No 119
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.11 E-value=2.9e-12 Score=89.94 Aligned_cols=107 Identities=15% Similarity=0.191 Sum_probs=59.3
Q ss_pred eeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhH--HHhHHHHHHcCCCEEEEEecCCHHHHHHHH--HHcCCCcceEEE
Q psy5399 22 KIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGY--LAKEKDLKAKGIHEIFCIAVNDAFVMEAWC--RKNNAEGKIRFL 97 (156)
Q Consensus 22 ~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l--~~~~~~~~~~~~~~v~~is~d~~~~~~~~~--~~~~~~~~f~~~ 97 (156)
.+.++. .+||+++|.|| ++||++|+..+.+.+ .++.+.+.+ ++. ++.|+.++...+.... ...+....+..+
T Consensus 39 ~~~~a~-~~gk~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~-~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 114 (172)
T 3f9u_A 39 GMEYAR-QHNKPVMLDFT-GYGCVNCRKMELAVWTDPKVSSIINN-DYV-LITLYVDNKTPLTEPVKIMENGTERTLRTV 114 (172)
T ss_dssp HHHHHH-HTTCCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHHHH-HCE-EEEEETTCCCEEEEEEEEEETTEEEEEEEH
T ss_pred HHHHHH-HcCCeEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhcC-CEE-EEEEecCcccccchhhhhhhcchhhhhhhh
Confidence 344455 57999999988 999999994322222 344444443 577 8888887532110000 000000001112
Q ss_pred ecCCchh-HHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 98 ADPNLEF-TKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 98 ~D~~~~~-~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
.|....+ +++||+. ..|+++++| +|+++....+..
T Consensus 115 ~~~~~~~~~~~~~v~----------~~Pt~~lid~~G~~~~~~~G~~ 151 (172)
T 3f9u_A 115 GDKWSYLQRVKFGAN----------AQPFYVLIDNEGNPLNKSYAYD 151 (172)
T ss_dssp HHHHHHHHHHHHSCC----------CSSEEEEECTTSCBSSCCBCSC
T ss_pred hhhhhHHHHHHcCCC----------CcceEEEECCCCCEEeeccCCC
Confidence 2222222 5788884 245589998 999998877544
No 120
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.10 E-value=5.3e-11 Score=76.41 Aligned_cols=77 Identities=14% Similarity=0.141 Sum_probs=57.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++|||+|.. ..|.+.++++++.+ .+. ++.|+.+. +..++++||
T Consensus 16 ~~~~~~v~f~-~~~C~~C~~-~~~~l~~~~~~~~~-~v~-~~~v~~~~-----------------------~~~~~~~~~ 68 (105)
T 1nsw_A 16 GDGPVLVDFW-AAWCGPCRM-MAPVLEEFAEAHAD-KVT-VAKLNVDE-----------------------NPETTSQFG 68 (105)
T ss_dssp SSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHSTT-TCE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHH-HHHHHHHHHHHhcC-CcE-EEEEECcC-----------------------CHHHHHHcC
Confidence 5677888877 999999996 47999999888764 366 77777542 346788888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.. .|+++++.+|+++....+...
T Consensus 69 v~~----------~Pt~~~~~~G~~~~~~~G~~~ 92 (105)
T 1nsw_A 69 IMS----------IPTLILFKGGRPVKQLIGYQP 92 (105)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESCCC
T ss_pred Ccc----------ccEEEEEeCCeEEEEEecCCC
Confidence 842 444777799999888776543
No 121
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.10 E-value=5.2e-11 Score=76.71 Aligned_cols=77 Identities=13% Similarity=0.138 Sum_probs=56.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++|||+|.. ..|.+.++++++.+ .+. ++.|+.+. +..++++||
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~-~~~~l~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 70 (107)
T 1dby_A 18 SSVPVLVDFW-APWCGPCRI-IAPVVDEIAGEYKD-KLK-CVKLNTDE-----------------------SPNVASEYG 70 (107)
T ss_dssp CSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTT-TCE-EEEEETTT-----------------------CHHHHHHHT
T ss_pred CCCcEEEEEE-CCCCHhHHH-HHHHHHHHHHHhCC-ceE-EEEEECCC-----------------------CHHHHHHCC
Confidence 4677888887 999999996 47999999988764 366 77777542 346888898
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.. .|+++++++|+++....+..+
T Consensus 71 v~~----------~Pt~~~~~~G~~~~~~~G~~~ 94 (107)
T 1dby_A 71 IRS----------IPTIMVFKGGKKCETIIGAVP 94 (107)
T ss_dssp CCS----------SCEEEEESSSSEEEEEESCCC
T ss_pred CCc----------CCEEEEEeCCEEEEEEeCCCC
Confidence 842 344556679999988776544
No 122
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.09 E-value=6.1e-11 Score=78.60 Aligned_cols=76 Identities=11% Similarity=0.190 Sum_probs=57.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|.. ..|.+.++++++++.++. ++.|+.+. +..++++||
T Consensus 32 ~~k~vvv~f~-a~~C~~C~~-~~~~l~~l~~~~~~~~v~-~~~vd~d~-----------------------~~~~~~~~~ 85 (121)
T 2j23_A 32 GDKVVVIDFW-ATWCGPCKM-IGPVFEKISDTPAGDKVG-FYKVDVDE-----------------------QSQIAQEVG 85 (121)
T ss_dssp SSSCEEEEEE-CTTCSTHHH-HHHHHHHHHTSTHHHHSE-EEEEETTT-----------------------CHHHHHHHT
T ss_pred CCCEEEEEEE-CCCCHhHHH-HHHHHHHHHHHCcCCcEE-EEEEECcC-----------------------CHHHHHHcC
Confidence 4677888877 999999996 479999999888866677 88777652 346788888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+.. .|+++++++|+++....+.
T Consensus 86 v~~----------~Pt~~~~~~G~~~~~~~G~ 107 (121)
T 2j23_A 86 IRA----------MPTFVFFKNGQKIDTVVGA 107 (121)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESS
T ss_pred CCc----------ccEEEEEECCeEEeeEcCC
Confidence 842 3446666899999887764
No 123
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.09 E-value=5.9e-11 Score=77.16 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=56.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++|||+|+. ..|.+.+++++++ ++. ++.|..++ .+..++++||
T Consensus 23 ~~~~vlv~f~-a~wC~~C~~-~~~~l~~~~~~~~--~v~-~~~vd~~~----------------------~~~~~~~~~~ 75 (111)
T 2pu9_C 23 GDKPVVLDMF-TQWCGPSKA-MAPKYEKLAEEYL--DVI-FLKLDCNQ----------------------ENKTLAKELG 75 (111)
T ss_dssp TTSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEECSS----------------------TTHHHHHHHC
T ss_pred CCCEEEEEEE-CCcCHhHHH-HCHHHHHHHHHCC--CeE-EEEEecCc----------------------chHHHHHHcC
Confidence 5788888888 899999996 4799999998876 566 88777662 2457888999
Q ss_pred CeeeccCCCcceeeeEEEEEe-CCcEEEEEEcc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEP 141 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~ 141 (156)
+.. .|+ +++. +|+++....+.
T Consensus 76 v~~----------~Pt-~~~~~~G~~~~~~~G~ 97 (111)
T 2pu9_C 76 IRV----------VPT-FKILKENSVVGEVTGA 97 (111)
T ss_dssp CSB----------SSE-EEEESSSSEEEEEESS
T ss_pred CCe----------eeE-EEEEeCCcEEEEEcCC
Confidence 842 344 5555 99999887764
No 124
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.08 E-value=5.7e-11 Score=77.33 Aligned_cols=74 Identities=12% Similarity=0.121 Sum_probs=56.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|+. ..|.+.+++++++ ++. ++.|..+ .+..++++|+
T Consensus 23 ~~k~vlv~f~-a~wC~~C~~-~~p~l~~l~~~~~--~~~-~~~vd~~-----------------------~~~~l~~~~~ 74 (109)
T 3f3q_A 23 QDKLVVVDFY-ATWCGPCKM-IAPMIEKFSEQYP--QAD-FYKLDVD-----------------------ELGDVAQKNE 74 (109)
T ss_dssp SSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEETT-----------------------TCHHHHHHTT
T ss_pred cCCEEEEEEE-CCcCHhHHH-HHHHHHHHHHHCC--CCE-EEEEECC-----------------------CCHHHHHHcC
Confidence 4777888887 999999996 4799999998885 466 7766653 3456888898
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+.. .|+++++++|+++....+.
T Consensus 75 v~~----------~Pt~~~~~~G~~~~~~~G~ 96 (109)
T 3f3q_A 75 VSA----------MPTLLLFKNGKEVAKVVGA 96 (109)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESS
T ss_pred CCc----------cCEEEEEECCEEEEEEeCC
Confidence 842 3447777899999888765
No 125
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.07 E-value=2.6e-11 Score=80.09 Aligned_cols=99 Identities=15% Similarity=0.197 Sum_probs=63.1
Q ss_pred CCCcCCcceecccCCCceeehhhH-hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHH
Q psy5399 5 VGDTLPDALLHENTPQTKIQIADA-IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEA 83 (156)
Q Consensus 5 ~G~~~P~f~l~~~~~g~~~~l~~~-~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~ 83 (156)
.|...|.+.+. +.++-.-.+.+. .++++++|.|| ++|||+|.. ..|.|.++++++. ++. ++.|+.+.
T Consensus 8 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vv~f~-~~~C~~C~~-~~~~l~~~~~~~~--~~~-~~~vd~~~------ 75 (122)
T 2vlu_A 8 AAVAAEVISVH-SLEQWTMQIEEANTAKKLVVIDFT-ASWCGPCRI-MAPVFADLAKKFP--NAV-FLKVDVDE------ 75 (122)
T ss_dssp ----CCCEEEC-SHHHHHHHHHHHHHTTCCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEETTT------
T ss_pred cCCCCcceecc-CHHHHHHHHHHhhccCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHCC--CcE-EEEEECCC------
Confidence 45555655554 222222222220 15788888888 999999996 4799999988876 366 88777653
Q ss_pred HHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 84 WCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 84 ~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+..++++||+.. .|+++++.+|+++....+..
T Consensus 76 -----------------~~~~~~~~~v~~----------~Pt~~~~~~G~~~~~~~G~~ 107 (122)
T 2vlu_A 76 -----------------LKPIAEQFSVEA----------MPTFLFMKEGDVKDRVVGAI 107 (122)
T ss_dssp -----------------CHHHHHHTTCCS----------SSEEEEEETTEEEEEEESSC
T ss_pred -----------------CHHHHHHcCCCc----------ccEEEEEeCCEEEEEEeCcC
Confidence 346788888842 33355556999998777644
No 126
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.07 E-value=9.1e-11 Score=77.72 Aligned_cols=76 Identities=13% Similarity=0.206 Sum_probs=56.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++|||+|+. ..|.+.+++++++ ++. ++.|..++ .+..++++||
T Consensus 36 ~~~~~vv~f~-a~wC~~C~~-~~~~l~~~~~~~~--~~~-~~~vd~~~----------------------~~~~~~~~~~ 88 (124)
T 1faa_A 36 GDKPVVLDMF-TQWCGPCKA-MAPKYEKLAEEYL--DVI-FLKLDCNQ----------------------ENKTLAKELG 88 (124)
T ss_dssp TTSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEECSS----------------------TTHHHHHHHC
T ss_pred CCCEEEEEEE-CCcCHhHHH-HhHHHHHHHHHCC--CCE-EEEEecCc----------------------chHHHHHHcC
Confidence 6888998888 999999996 4799999998876 566 77777652 2456888899
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+.. .|+.+++.+|+++....+..
T Consensus 89 v~~----------~Pt~~~~~~G~~~~~~~G~~ 111 (124)
T 1faa_A 89 IRV----------VPTFKILKENSVVGEVTGAK 111 (124)
T ss_dssp CSS----------SSEEEEEETTEEEEEEESSC
T ss_pred CCe----------eeEEEEEeCCcEEEEEcCCC
Confidence 842 33344445999998877643
No 127
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.07 E-value=6.2e-11 Score=79.56 Aligned_cols=77 Identities=6% Similarity=0.110 Sum_probs=56.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|.. ..|.+.++++++.+ ++. ++.|+.+. +..++++|+
T Consensus 39 ~~k~vlv~F~-a~wC~~C~~-~~p~l~~l~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~ 91 (128)
T 2o8v_B 39 ADGAILVDFW-AEWCGPAKM-IAPILDEIADEYQG-KLT-VAKLNIDQ-----------------------NPGTAPKYG 91 (128)
T ss_dssp CSSEEEEEEE-CSSCHHHHH-THHHHHHHHHHTTT-TEE-EEEEETTT-----------------------CCTTSGGGT
T ss_pred cCCEEEEEEE-CCCCHHHHH-HhHHHHHHHHHhcC-CeE-EEEEECCC-----------------------CHHHHHHcC
Confidence 4677777777 999999996 47999999988864 355 77776542 345778888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.. .|+++++.+|+++....+...
T Consensus 92 v~~----------~Pt~~~~~~G~~~~~~~G~~~ 115 (128)
T 2o8v_B 92 IRG----------IPTLLLFKNGEVAATKVGALS 115 (128)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESCCC
T ss_pred CCc----------cCEEEEEeCCEEEEEEcCCCC
Confidence 842 444777799999988776543
No 128
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.06 E-value=1.5e-10 Score=75.41 Aligned_cols=74 Identities=11% Similarity=0.127 Sum_probs=53.5
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
.++++++|.|| ++||++|+.. .|.+.++++++. ++. ++.|.. |.+..++++|
T Consensus 18 ~~~k~vvv~F~-a~wC~~C~~~-~p~~~~~~~~~~--~~~-~~~vd~-----------------------d~~~~l~~~~ 69 (105)
T 3zzx_A 18 AGNKLVVIDFY-ATWCGPCKMI-APKLEELSQSMS--DVV-FLKVDV-----------------------DECEDIAQDN 69 (105)
T ss_dssp TTTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TEE-EEEEET-----------------------TTCHHHHHHT
T ss_pred cCCCEEEEEEE-CCCCCCccCC-CcchhhhhhccC--CeE-EEEEec-----------------------ccCHHHHHHc
Confidence 45778888887 9999999964 699988887764 333 444443 3456788999
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
||.. .|+++++.+|+++....+
T Consensus 70 ~V~~----------~PT~~~~~~G~~v~~~~G 91 (105)
T 3zzx_A 70 QIAC----------MPTFLFMKNGQKLDSLSG 91 (105)
T ss_dssp TCCB----------SSEEEEEETTEEEEEEES
T ss_pred CCCe----------ecEEEEEECCEEEEEEeC
Confidence 9942 343566679999988776
No 129
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.06 E-value=9.2e-11 Score=76.27 Aligned_cols=75 Identities=12% Similarity=0.263 Sum_probs=54.7
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCC
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGV 110 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv 110 (156)
+++++|.|| ++||++|.. ..|.+.++++++...++. ++.|+.+. +..++++||+
T Consensus 21 ~~~~~v~f~-a~wC~~C~~-~~~~~~~~~~~~~~~~~~-~~~vd~~~-----------------------~~~~~~~~~v 74 (112)
T 3d6i_A 21 DKLIVLYFH-TSWAEPCKA-LKQVFEAISNEPSNSNVS-FLSIDADE-----------------------NSEISELFEI 74 (112)
T ss_dssp TCCEEEEEE-CCC--CHHH-HHHHHHHHHHCGGGTTSE-EEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCEEEEEEE-CCCCHHHHH-HHHHHHHHHHhcCCCCEE-EEEEeccc-----------------------CHHHHHHcCC
Confidence 678888887 999999996 479999998886545677 88887663 3468888988
Q ss_pred eeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 111 EHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 111 ~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
.. .|+++++++|+++....+.
T Consensus 75 ~~----------~Pt~~~~~~G~~~~~~~G~ 95 (112)
T 3d6i_A 75 SA----------VPYFIIIHKGTILKELSGA 95 (112)
T ss_dssp CS----------SSEEEEEETTEEEEEECSC
T ss_pred Cc----------ccEEEEEECCEEEEEecCC
Confidence 42 3446666799999877664
No 130
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.06 E-value=6.1e-11 Score=80.18 Aligned_cols=75 Identities=13% Similarity=0.181 Sum_probs=57.6
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
.+|++++|.|| ++||++|.. ..|.+.++++++. ++. ++.|+.+ .+..++++|
T Consensus 44 ~~~k~vvv~f~-a~wC~~C~~-~~~~l~~l~~~~~--~v~-~~~v~~~-----------------------~~~~~~~~~ 95 (139)
T 3d22_A 44 RDGKIVLANFS-ARWCGPSRQ-IAPYYIELSENYP--SLM-FLVIDVD-----------------------ELSDFSASW 95 (139)
T ss_dssp HHTCCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEETT-----------------------TSHHHHHHT
T ss_pred hcCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHCC--CCE-EEEEeCc-----------------------ccHHHHHHc
Confidence 35888888888 899999996 4799999998874 577 8888775 235688889
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
|+.. .|+++++.+|+++....+.
T Consensus 96 ~v~~----------~Pt~~~~~~G~~~~~~~G~ 118 (139)
T 3d22_A 96 EIKA----------TPTFFFLRDGQQVDKLVGA 118 (139)
T ss_dssp TCCE----------ESEEEEEETTEEEEEEESC
T ss_pred CCCc----------ccEEEEEcCCeEEEEEeCC
Confidence 8842 4445666799999887765
No 131
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.05 E-value=1e-10 Score=75.86 Aligned_cols=74 Identities=12% Similarity=0.159 Sum_probs=55.6
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCC
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGV 110 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv 110 (156)
+++++|.|| ++|||+|.. ..|.+.++++++.+ ++. ++.|+.+ .+..++++||+
T Consensus 24 ~~~~vv~f~-~~~C~~C~~-~~~~l~~~~~~~~~-~~~-~~~vd~~-----------------------~~~~~~~~~~v 76 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKM-IAPLFETLSNDYAG-KVI-FLKVDVD-----------------------AVAAVAEAAGI 76 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTT-TSE-EEEEETT-----------------------TTHHHHHHHTC
T ss_pred CCeEEEEEE-CCCCHHHHH-HHHHHHHHHHHcCC-CeE-EEEEECC-----------------------chHHHHHHcCC
Confidence 788888887 899999996 47999999988864 566 7777764 24568888988
Q ss_pred eeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 111 EHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 111 ~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
.. .|+++++.+|+++....+.
T Consensus 77 ~~----------~Pt~~~~~~G~~~~~~~G~ 97 (112)
T 1ep7_A 77 TA----------MPTFHVYKDGVKADDLVGA 97 (112)
T ss_dssp CB----------SSEEEEEETTEEEEEEESC
T ss_pred Cc----------ccEEEEEECCeEEEEEcCC
Confidence 42 3435555699999887764
No 132
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.05 E-value=2.3e-10 Score=74.38 Aligned_cols=76 Identities=13% Similarity=0.139 Sum_probs=57.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|+|| ++|||+|.. ..|.+.++++++.+. +. ++.|+.+. +..++++||
T Consensus 24 ~~~~~lv~f~-~~~C~~C~~-~~~~l~~~~~~~~~~-v~-~~~v~~~~-----------------------~~~~~~~~~ 76 (115)
T 1thx_A 24 AEQPVLVYFW-ASWCGPCQL-MSPLINLAANTYSDR-LK-VVKLEIDP-----------------------NPTTVKKYK 76 (115)
T ss_dssp CSSCEEEEEE-CTTCTTHHH-HHHHHHHHHHHTTTT-CE-EEEEESTT-----------------------CHHHHHHTT
T ss_pred CCceEEEEEE-CCCCHHHHH-hHHHHHHHHHHhCCc-EE-EEEEEcCC-----------------------CHHHHHHcC
Confidence 5678888887 899999996 479999999888643 66 88777652 345788888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+.. .|+++++.+|+++....+..
T Consensus 77 v~~----------~Pt~~~~~~G~~~~~~~g~~ 99 (115)
T 1thx_A 77 VEG----------VPALRLVKGEQILDSTEGVI 99 (115)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESCC
T ss_pred CCc----------eeEEEEEcCCEEEEEecCCC
Confidence 842 44477778999998776643
No 133
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=2.4e-10 Score=76.32 Aligned_cols=76 Identities=9% Similarity=0.102 Sum_probs=55.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH---cCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHH
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA---KGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTK 106 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~---~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~ 106 (156)
.+++++|.|| ++||++|+. ..|.+.++++++.+ ..+. ++.|..+ .+..+++
T Consensus 24 ~~~~~lv~f~-a~wC~~C~~-~~~~~~~~~~~~~~~~~~~~~-~~~vd~~-----------------------~~~~l~~ 77 (133)
T 1x5d_A 24 SEDVWMVEFY-APWCGHCKN-LEPEWAAAASEVKEQTKGKVK-LAAVDAT-----------------------VNQVLAS 77 (133)
T ss_dssp SSSEEEEEEE-CTTCHHHHT-HHHHHHHHHHHHHHHTTTSEE-EEEEETT-----------------------TCCHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHh-hcHHHHHHHHHHHhhcCCcEE-EEEEECC-----------------------CCHHHHH
Confidence 4667777777 999999995 57999999999874 3455 6666543 2357889
Q ss_pred hhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 107 KLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 107 ~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+|++.. .|+++++++|+++..+.+.
T Consensus 78 ~~~v~~----------~Pt~~~~~~g~~~~~~~G~ 102 (133)
T 1x5d_A 78 RYGIRG----------FPTIKIFQKGESPVDYDGG 102 (133)
T ss_dssp HHTCCS----------SSEEEEEETTEEEEEECSC
T ss_pred hCCCCe----------eCeEEEEeCCCceEEecCC
Confidence 999842 4448888889877766553
No 134
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=7.5e-10 Score=74.75 Aligned_cols=84 Identities=13% Similarity=0.120 Sum_probs=55.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|+. ..|.+.++++++.+.++. ++.|..+. +..++++|+
T Consensus 25 ~~~~vlv~f~-a~wC~~C~~-~~p~~~~l~~~~~~~~v~-~~~vd~~~-----------------------~~~~~~~~~ 78 (137)
T 2dj0_A 25 KRVTWIVEFF-ANWSNDCQS-FAPIYADLSLKYNCTGLN-FGKVDVGR-----------------------YTDVSTRYK 78 (137)
T ss_dssp TTSCEEEEEC-CTTCSTTTT-THHHHHHHHHHHCSSSCE-EEECCTTT-----------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHhCCCCeE-EEEEeCcc-----------------------CHHHHHHcc
Confidence 4567888887 999999996 589999999998754566 77666543 223445555
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.... + ....|+++++.+|+++....+...
T Consensus 79 v~~~~---~-~~~~Pt~~~~~~G~~~~~~~G~~~ 108 (137)
T 2dj0_A 79 VSTSP---L-TKQLPTLILFQGGKEAMRRPQIDK 108 (137)
T ss_dssp CCCCS---S-SSCSSEEEEESSSSEEEEESCBCS
T ss_pred CcccC---C-cCCCCEEEEEECCEEEEEecCcCc
Confidence 52100 0 012444777789999887765433
No 135
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.05 E-value=1.2e-10 Score=85.22 Aligned_cols=97 Identities=7% Similarity=0.099 Sum_probs=65.6
Q ss_pred cCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHH
Q psy5399 8 TLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRK 87 (156)
Q Consensus 8 ~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~ 87 (156)
+.+.-... ..+...+.-.-+-++++++|.|| ++||++|+. ..|.+.++++++.+. +. ++.|+.+
T Consensus 8 ~~~~~~~~-~lt~~~f~~~v~~~~k~vvv~F~-a~wC~~C~~-~~p~l~~l~~~~~~~-v~-~~~vd~d----------- 71 (222)
T 3dxb_A 8 HPMSDKII-HLTDDSFDTDVLKADGAILVDFW-AEWCGPCKM-IAPILDEIADEYQGK-LT-VAKLNID----------- 71 (222)
T ss_dssp -CCSCCCE-ECCTTTHHHHHTTCSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTTT-CE-EEEEETT-----------
T ss_pred CCCCCCce-eCCHHHHHHHHHhcCCEEEEEEE-CCcCHHHHH-HHHHHHHHHHHhcCC-cE-EEEEECC-----------
Confidence 34444444 34555543322125778888887 999999996 489999999998643 66 7777764
Q ss_pred cCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 88 NNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 88 ~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
.+..++++|++.. .|+++++++|+++....+..
T Consensus 72 ------------~~~~l~~~~~v~~----------~Pt~~~~~~G~~~~~~~G~~ 104 (222)
T 3dxb_A 72 ------------QNPGTAPKYGIRG----------IPTLLLFKNGEVAATKVGAL 104 (222)
T ss_dssp ------------TCTTTGGGGTCCS----------BSEEEEEETTEEEEEEESCC
T ss_pred ------------CCHHHHHHcCCCc----------CCEEEEEECCeEEEEecccc
Confidence 2345778898842 44467778999998877653
No 136
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.04 E-value=8.9e-11 Score=78.30 Aligned_cols=73 Identities=12% Similarity=0.174 Sum_probs=54.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|+|| ++|||+|.. ..|.|.++++++. ++. ++.|+.+ .+..++++||
T Consensus 37 ~~k~vvv~f~-a~wC~~C~~-~~~~l~~l~~~~~--~v~-~~~vd~d-----------------------~~~~l~~~~~ 88 (124)
T 1xfl_A 37 SKTLVVVDFT-ASWCGPCRF-IAPFFADLAKKLP--NVL-FLKVDTD-----------------------ELKSVASDWA 88 (124)
T ss_dssp TTCEEEEEEE-CTTCHHHHH-HHHHHHHHHHHCS--SEE-EEEEETT-----------------------TSHHHHHHTT
T ss_pred cCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHCC--CcE-EEEEECc-----------------------cCHHHHHHcC
Confidence 5888888887 899999996 4799999988875 565 6666653 3456888898
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
+.. .|+++++.+|+++....+
T Consensus 89 v~~----------~Pt~~~~~~G~~~~~~~G 109 (124)
T 1xfl_A 89 IQA----------MPTFMFLKEGKILDKVVG 109 (124)
T ss_dssp CCS----------SSEEEEEETTEEEEEEES
T ss_pred CCc----------cCEEEEEECCEEEEEEeC
Confidence 842 333555569999988776
No 137
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.03 E-value=5e-10 Score=84.44 Aligned_cols=77 Identities=8% Similarity=0.081 Sum_probs=58.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|+. ..|.+.++++++.+ .+. ++.|+.+. +..++++||
T Consensus 25 ~~~~v~v~f~-a~wC~~C~~-~~p~~~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~ 77 (287)
T 3qou_A 25 MTTPVLFYFW-SERSQHCLQ-LTPILESLAAQYNG-QFI-LAKLDCDA-----------------------EQMIAAQFG 77 (287)
T ss_dssp TTSCEEEEEE-CTTCTTTTT-THHHHHHHHHHHTS-SSE-EEEEETTT-----------------------CHHHHHTTT
T ss_pred CCCeEEEEEE-CCCChHHHH-HHHHHHHHHHHcCC-CeE-EEEEeCcc-----------------------CHHHHHHcC
Confidence 4788999988 999999996 58999999999873 366 77776642 347888898
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
|. ..|+++++.+|+++..+.+...
T Consensus 78 v~----------~~Pt~~~~~~G~~~~~~~g~~~ 101 (287)
T 3qou_A 78 LR----------AIPTVYLFQNGQPVDGFQGPQP 101 (287)
T ss_dssp CC----------SSSEEEEEETTEEEEEEESCCC
T ss_pred CC----------CCCeEEEEECCEEEEEeeCCCC
Confidence 84 2444777789999988776543
No 138
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.03 E-value=1.6e-10 Score=74.33 Aligned_cols=78 Identities=15% Similarity=0.180 Sum_probs=57.7
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
.++++++|.|| ++||++|.. ..|.+.++++++.+ .+. ++.|+. |.+..++++|
T Consensus 19 ~~~~~~lv~f~-~~~C~~C~~-~~~~~~~~~~~~~~-~~~-~~~v~~-----------------------~~~~~~~~~~ 71 (109)
T 3tco_A 19 RNNKLVLVDCW-AEWCAPCHL-YEPIYKKVAEKYKG-KAV-FGRLNV-----------------------DENQKIADKY 71 (109)
T ss_dssp HHSSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTT-TSE-EEEEET-----------------------TTCHHHHHHT
T ss_pred hcCCeEEEEEE-CCCCHHHHh-hhHHHHHHHHHhCC-Cce-EEEEcc-----------------------ccCHHHHHhc
Confidence 35788888887 999999996 47999999988864 355 666655 3345678888
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
++.. .|+++++.+|+++....+...
T Consensus 72 ~i~~----------~Pt~~~~~~g~~~~~~~g~~~ 96 (109)
T 3tco_A 72 SVLN----------IPTTLIFVNGQLVDSLVGAVD 96 (109)
T ss_dssp TCCS----------SSEEEEEETTEEEEEEESCCC
T ss_pred Cccc----------CCEEEEEcCCcEEEeeeccCC
Confidence 8842 444777789999998777544
No 139
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.03 E-value=1.5e-10 Score=80.29 Aligned_cols=76 Identities=8% Similarity=0.107 Sum_probs=58.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|.. ..|.|.++++++.+ .+. ++.|+.+ .+..++++||
T Consensus 63 ~~~~vlv~F~-a~wC~~C~~-~~p~l~~la~~~~~-~v~-~~~vd~~-----------------------~~~~l~~~~~ 115 (155)
T 2ppt_A 63 DDLPLLVDFW-APWCGPCRQ-MAPQFQAAAATLAG-QVR-LAKIDTQ-----------------------AHPAVAGRHR 115 (155)
T ss_dssp CSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTT-TCE-EEEEETT-----------------------TSTHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHH-HHHHHHHHHHHccC-CEE-EEEEeCC-----------------------ccHHHHHHcC
Confidence 5678888887 999999996 47999999999864 366 7777764 2346889999
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+. ..|+++++++|+++....+..
T Consensus 116 i~----------~~Pt~~~~~~G~~~~~~~G~~ 138 (155)
T 2ppt_A 116 IQ----------GIPAFILFHKGRELARAAGAR 138 (155)
T ss_dssp CC----------SSSEEEEEETTEEEEEEESCC
T ss_pred CC----------cCCEEEEEeCCeEEEEecCCC
Confidence 84 244477778999998877643
No 140
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.03 E-value=1.9e-10 Score=73.65 Aligned_cols=75 Identities=9% Similarity=0.076 Sum_probs=57.3
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
.++++++|.|| ++|||+|.. ..|.+.+++++++ ++. ++.|+.+ .+..++++|
T Consensus 18 ~~~~~~~v~f~-~~~C~~C~~-~~~~~~~~~~~~~--~~~-~~~vd~~-----------------------~~~~~~~~~ 69 (105)
T 3m9j_A 18 AGDKLVVVDFS-ATWCGPCKM-IKPFFHSLSEKYS--NVI-FLEVDVD-----------------------DCQDVASES 69 (105)
T ss_dssp TTTSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHST--TSE-EEEEETT-----------------------TCHHHHHHT
T ss_pred cCCCeEEEEEE-CCCChhhHH-HHHHHHHHHHHcc--CeE-EEEEEhh-----------------------hhHHHHHHc
Confidence 36888888887 899999996 4799999998885 466 7777754 234678888
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
++.. .|+++++++|+++....+.
T Consensus 70 ~v~~----------~Pt~~~~~~g~~~~~~~g~ 92 (105)
T 3m9j_A 70 EVKS----------MPTFQFFKKGQKVGEFSGA 92 (105)
T ss_dssp TCCB----------SSEEEEEETTEEEEEEESS
T ss_pred CCCc----------CcEEEEEECCeEEEEEeCC
Confidence 8842 4447777899998887765
No 141
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.02 E-value=1.9e-10 Score=75.94 Aligned_cols=75 Identities=8% Similarity=0.130 Sum_probs=56.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|+|| ++||++|.. ..|.+.++++++.. ++. ++.|+.+. +..++++|+
T Consensus 30 ~~k~vlv~f~-a~~C~~C~~-~~~~l~~~~~~~~~-~v~-~~~vd~d~-----------------------~~~l~~~~~ 82 (119)
T 1w4v_A 30 SETPVVVDFH-AQWCGPCKI-LGPRLEKMVAKQHG-KVV-MAKVDIDD-----------------------HTDLAIEYE 82 (119)
T ss_dssp CSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTT-SSE-EEEEETTT-----------------------THHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHH-HHHHHHHHHHHhcC-CeE-EEEEeCCC-----------------------CHHHHHHcC
Confidence 4678888887 999999996 47999999988754 466 77777542 346888898
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+.. .|+++++.+|+++....+.
T Consensus 83 v~~----------~Pt~~~~~~G~~~~~~~G~ 104 (119)
T 1w4v_A 83 VSA----------VPTVLAMKNGDVVDKFVGI 104 (119)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESC
T ss_pred CCc----------ccEEEEEeCCcEEEEEcCC
Confidence 842 3446777899998877664
No 142
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.01 E-value=1.2e-10 Score=75.17 Aligned_cols=76 Identities=13% Similarity=0.038 Sum_probs=49.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|+. ..|.+.++++++. ++. ++.|+.+ .+..++++||
T Consensus 17 ~~~~vlv~f~-a~wC~~C~~-~~p~~~~~~~~~~--~~~-~~~vd~~-----------------------~~~~l~~~~~ 68 (105)
T 4euy_A 17 EQQLVLLFIK-TENCGVCDV-MLRKVNYVLENYN--YVE-KIEILLQ-----------------------DMQEIAGRYA 68 (105)
T ss_dssp CSSEEEEEEE-ESSCHHHHH-HHHHHHHHHHTCT--TEE-EEEEEEC-----------------------CC--------
T ss_pred cCCCEEEEEe-CCCCcchHH-HHHHHHHHHHHcC--Cce-EEEEECC-----------------------CCHHHHHhcC
Confidence 5677888887 999999996 4799999988873 455 6666654 2345777888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+. ..|+++++++|+++....+...
T Consensus 69 v~----------~~Pt~~~~~~G~~~~~~~g~~~ 92 (105)
T 4euy_A 69 VF----------TGPTVLLFYNGKEILRESRFIS 92 (105)
T ss_dssp -C----------CCCEEEEEETTEEEEEEESSCC
T ss_pred CC----------CCCEEEEEeCCeEEEEEeCCcC
Confidence 84 2444777789999988777543
No 143
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.01 E-value=2.2e-10 Score=73.80 Aligned_cols=77 Identities=8% Similarity=0.153 Sum_probs=55.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|+. ..|.+.++++++.+ .+. ++.|+.+ .+..++++||
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~-~~~~l~~~~~~~~~-~~~-~~~v~~~-----------------------~~~~~~~~~~ 71 (108)
T 2trx_A 19 ADGAILVDFW-AEWCGPCKM-IAPILDEIADEYQG-KLT-VAKLNID-----------------------QNPGTAPKYG 71 (108)
T ss_dssp CSSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTT-TEE-EEEEETT-----------------------TCTTHHHHTT
T ss_pred cCCeEEEEEE-CCCCHhHHH-HHHHHHHHHHHhCC-CcE-EEEEECC-----------------------CCHHHHHHcC
Confidence 4677888777 999999996 47999999888753 355 6666544 2346888999
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.. .|+++++.+|+++....+...
T Consensus 72 v~~----------~Pt~~~~~~G~~~~~~~G~~~ 95 (108)
T 2trx_A 72 IRG----------IPTLLLFKNGEVAATKVGALS 95 (108)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESCCC
T ss_pred Ccc----------cCEEEEEeCCEEEEEEecCCC
Confidence 842 344777789999987776443
No 144
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.00 E-value=2.9e-10 Score=76.70 Aligned_cols=81 Identities=14% Similarity=0.141 Sum_probs=53.6
Q ss_pred CCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEE
Q psy5399 18 TPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFL 97 (156)
Q Consensus 18 ~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~ 97 (156)
.++..+.-.- .++++++|+|| ++||++|+. ..|.|.++++++.+.+.. +..+..|
T Consensus 22 l~~~~~~~~~-~~~~~vlv~f~-a~wC~~C~~-~~p~~~~~~~~~~~~~~~-v~~~~vd--------------------- 76 (140)
T 2dj1_A 22 LNDGNFDNFV-ADKDTVLLEFY-APWCGHCKQ-FAPEYEKIASTLKDNDPP-IAVAKID--------------------- 76 (140)
T ss_dssp CCTTTHHHHH-TTCSEEEEEEC-CTTCHHHHT-THHHHHHHHHHHHSSSSC-CEEEEEC---------------------
T ss_pred cChHhHHHHH-hcCCeEEEEEE-CCCCHHHHH-hhHHHHHHHHHHhccCCc-eEEEEEe---------------------
Confidence 3444443322 35677777777 999999995 579999999999866433 3333333
Q ss_pred ecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCc
Q psy5399 98 ADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGK 133 (156)
Q Consensus 98 ~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~ 133 (156)
.|.+..++++|++.. .|+++++++|+
T Consensus 77 ~~~~~~~~~~~~v~~----------~Pt~~~~~~G~ 102 (140)
T 2dj1_A 77 ATSASMLASKFDVSG----------YPTIKILKKGQ 102 (140)
T ss_dssp TTTCHHHHHHTTCCS----------SSEEEEEETTE
T ss_pred CcccHHHHHHCCCCc----------cCeEEEEECCc
Confidence 122457888999842 44477778888
No 145
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.00 E-value=1.8e-10 Score=73.66 Aligned_cols=77 Identities=9% Similarity=0.123 Sum_probs=55.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++|||+|.. ..|.+.++++++++ .+. ++.++.+. +..++++||
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~-~~~~~~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 69 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKL-IAPVIDELAKEYSG-KIA-VYKLNTDE-----------------------APGIATQYN 69 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTT-TCE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCChHHHH-HHHHHHHHHHHhcC-ceE-EEEEcCcc-----------------------hHHHHHhCC
Confidence 4677888887 899999996 47999998888764 355 66666542 346788888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.. .|+++++++|+++....+..+
T Consensus 70 v~~----------~Pt~~~~~~g~~~~~~~G~~~ 93 (105)
T 1fb6_A 70 IRS----------IPTVLFFKNGERKESIIGAVP 93 (105)
T ss_dssp CCS----------SSEEEEEETTEEEEEEEECCC
T ss_pred CCc----------ccEEEEEeCCeEEEEEecCCC
Confidence 842 334555579999887776443
No 146
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.00 E-value=2.3e-10 Score=72.78 Aligned_cols=75 Identities=12% Similarity=0.104 Sum_probs=56.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++|||+|.. ..|.+.++++++++ +. ++.++.+ .+..++++||
T Consensus 15 ~~~~~~v~f~-~~~C~~C~~-~~~~~~~~~~~~~~--~~-~~~v~~~-----------------------~~~~~~~~~~ 66 (104)
T 2e0q_A 15 SHEIAVVDFW-AEWCAPCLI-LAPIIEELAEDYPQ--VG-FGKLNSD-----------------------ENPDIAARYG 66 (104)
T ss_dssp HSSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHCTT--SE-EEEEETT-----------------------TCHHHHHHTT
T ss_pred cCCcEEEEEE-CCCChhHHH-HhHHHHHHHHHcCC--ce-EEEEECC-----------------------CCHHHHHhCC
Confidence 4677888887 999999996 47999998888763 66 8888764 2346888888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+.. .|+++++.+|+++....+..
T Consensus 67 v~~----------~Pt~~~~~~g~~~~~~~g~~ 89 (104)
T 2e0q_A 67 VMS----------LPTVIFFKDGEPVDEIIGAV 89 (104)
T ss_dssp CCS----------SCEEEEEETTEEEEEEESCC
T ss_pred ccc----------cCEEEEEECCeEhhhccCCC
Confidence 842 44467778999988777643
No 147
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.99 E-value=3.4e-10 Score=72.60 Aligned_cols=76 Identities=16% Similarity=0.185 Sum_probs=56.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|... .|.+.++++++.+ ++. ++.|+.+ .+..++++||
T Consensus 19 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~~-~~~v~~~-----------------------~~~~~~~~~~ 71 (107)
T 2i4a_A 19 ASGLVLVDFW-AEWCGPCKMI-GPALGEIGKEFAG-KVT-VAKVNID-----------------------DNPETPNAYQ 71 (107)
T ss_dssp CSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTT-SEE-EEEEETT-----------------------TCCHHHHHTT
T ss_pred CCCEEEEEEE-CCCChhHHHH-hHHHHHHHHHhCC-cEE-EEEEECC-----------------------CCHHHHHhcC
Confidence 5678888887 9999999964 7999999988864 455 6777654 2346888898
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+.. .|+++++.+|+++....+..
T Consensus 72 v~~----------~Pt~~~~~~G~~~~~~~G~~ 94 (107)
T 2i4a_A 72 VRS----------IPTLMLVRDGKVIDKKVGAL 94 (107)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESCC
T ss_pred CCc----------cCEEEEEeCCEEEEEecCCC
Confidence 842 44477778999998776643
No 148
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.99 E-value=2.8e-10 Score=72.68 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=55.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++|||+|.. ..|.+.+++++++ ++. ++.|+.+. +..++++||
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~-~~~~l~~~~~~~~--~~~-~~~v~~~~-----------------------~~~~~~~~~ 69 (104)
T 2vim_A 18 KGRLIVVDFF-AQWCGPCRN-IAPKVEALAKEIP--EVE-FAKVDVDQ-----------------------NEEAAAKYS 69 (104)
T ss_dssp TTSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHH-hhHHHHHHHHHCC--CCE-EEEEeccC-----------------------CHHHHHHcC
Confidence 6788888887 999999996 4799999888875 677 88887652 346778888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
+.. .|+++++++|+++....+
T Consensus 70 v~~----------~Pt~~~~~~g~~~~~~~G 90 (104)
T 2vim_A 70 VTA----------MPTFVFIKDGKEVDRFSG 90 (104)
T ss_dssp CCS----------SSEEEEEETTEEEEEEES
T ss_pred Ccc----------ccEEEEEeCCcEEEEEeC
Confidence 842 344566679999887776
No 149
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.98 E-value=3.6e-10 Score=72.36 Aligned_cols=75 Identities=9% Similarity=0.166 Sum_probs=55.0
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
.++++++|.|| ++|||+|.. ..|.+.+++++++ .++. ++.|+.+ .+..++++|
T Consensus 18 ~~~~~~vv~f~-~~~C~~C~~-~~~~l~~~~~~~~-~~~~-~~~v~~~-----------------------~~~~~~~~~ 70 (106)
T 1xwb_A 18 ASGKLVVLDFF-ATWCGPCKM-ISPKLVELSTQFA-DNVV-VLKVDVD-----------------------ECEDIAMEY 70 (106)
T ss_dssp HTTSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHTT-TTEE-EEEEETT-----------------------TCHHHHHHT
T ss_pred cCCCEEEEEEE-CCcCHHHHH-hhHHHHHHHHHhC-CCeE-EEEEecc-----------------------chHHHHHHc
Confidence 36888888887 899999996 4799999888875 3455 6666654 245688888
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
|+.. .|+++++++|+++....+
T Consensus 71 ~v~~----------~Pt~~~~~~G~~~~~~~g 92 (106)
T 1xwb_A 71 NISS----------MPTFVFLKNGVKVEEFAG 92 (106)
T ss_dssp TCCS----------SSEEEEEETTEEEEEEES
T ss_pred CCCc----------ccEEEEEcCCcEEEEEcC
Confidence 8842 333555569999887766
No 150
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.97 E-value=1.3e-10 Score=78.63 Aligned_cols=86 Identities=15% Similarity=0.198 Sum_probs=60.2
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
.++ +++|.|| ++||++|+. ..|.+.++++++. +. ++.|+.++...... .|....++++|
T Consensus 30 ~~~-~vlv~F~-a~wC~~C~~-~~p~l~~l~~~~~---v~-~~~vd~~~~~~~~~--------------~d~~~~l~~~~ 88 (135)
T 3emx_A 30 LQG-DAILAVY-SKTCPHCHR-DWPQLIQASKEVD---VP-IVMFIWGSLIGERE--------------LSAARLEMNKA 88 (135)
T ss_dssp HTS-SEEEEEE-ETTCHHHHH-HHHHHHHHHTTCC---SC-EEEEEECTTCCHHH--------------HHHHHHHHHHH
T ss_pred hCC-cEEEEEE-CCcCHhhhH-hChhHHHHHHHCC---CE-EEEEECCCchhhhh--------------hhhhHHHHHHc
Confidence 455 7888877 999999996 5799999988774 77 89998754321100 12335678899
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEccCCCc
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDGTG 145 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~~~ 145 (156)
|+.. .|+++++++|+++....+..+..
T Consensus 89 ~v~~----------~Pt~~~~~~G~~v~~~~G~~~~~ 115 (135)
T 3emx_A 89 GVEG----------TPTLVFYKEGRIVDKLVGATPWS 115 (135)
T ss_dssp TCCS----------SSEEEEEETTEEEEEEESCCCHH
T ss_pred CCce----------eCeEEEEcCCEEEEEEeCCCCHH
Confidence 9842 34355667999999888765533
No 151
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.97 E-value=2.6e-10 Score=74.81 Aligned_cols=73 Identities=12% Similarity=0.130 Sum_probs=54.2
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
.++++++|.|| ++||++|+. ..|.+.++++++ ++. ++.|+.+ .+..++++|
T Consensus 31 ~~~~~~vv~f~-a~wC~~C~~-~~~~~~~~~~~~---~~~-~~~vd~~-----------------------~~~~~~~~~ 81 (117)
T 2xc2_A 31 HKNKLVVVDFF-ATWCGPCKT-IAPLFKELSEKY---DAI-FVKVDVD-----------------------KLEETARKY 81 (117)
T ss_dssp TTTSCEEEEEE-CTTCHHHHH-HHHHHHHHHTTS---SSE-EEEEETT-----------------------TSHHHHHHT
T ss_pred CCCCEEEEEEE-CCCCHhHHH-HhHHHHHHHHHc---CcE-EEEEECC-----------------------ccHHHHHHc
Confidence 36888888888 999999996 479998888776 566 7777664 235678888
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
|+.. .|+++++++|+++....+
T Consensus 82 ~v~~----------~Pt~~~~~~G~~~~~~~G 103 (117)
T 2xc2_A 82 NISA----------MPTFIAIKNGEKVGDVVG 103 (117)
T ss_dssp TCCS----------SSEEEEEETTEEEEEEES
T ss_pred CCCc----------cceEEEEeCCcEEEEEeC
Confidence 8842 333555579999887776
No 152
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.97 E-value=3.2e-10 Score=78.14 Aligned_cols=78 Identities=13% Similarity=0.114 Sum_probs=56.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|+. ..|.+.++++++.+. +. ++.|+. |.+..++++|+
T Consensus 22 ~~k~vlv~F~-a~WC~~C~~-~~p~l~~l~~~~~~~-~~-~~~vd~-----------------------d~~~~l~~~~~ 74 (149)
T 3gix_A 22 AEKVLVLRFG-RDEDPVCLQ-LDDILSKTSSDLSKM-AA-IYLVDV-----------------------DQTAVYTQYFD 74 (149)
T ss_dssp CSSEEEEEEE-CTTSHHHHH-HHHHHHHHHTTTTTT-EE-EEEEET-----------------------TTCCHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHccCc-eE-EEEEEC-----------------------CcCHHHHHHcC
Confidence 4788888887 999999996 479999999887532 44 666654 34567889999
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDGT 144 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~~ 144 (156)
+.. .|+++++.+|+++...++....
T Consensus 75 v~~----------~Pt~~~~~~G~~v~~~~g~~~~ 99 (149)
T 3gix_A 75 ISY----------IPSTVFFFNGQHMKVDYGSPDH 99 (149)
T ss_dssp CCS----------SSEEEEEETTEEEEEECSSSCC
T ss_pred CCc----------cCeEEEEECCeEEEeecCCCCC
Confidence 842 3446655699999766654443
No 153
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.96 E-value=3.7e-10 Score=73.60 Aligned_cols=74 Identities=16% Similarity=0.152 Sum_probs=54.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|+|| ++||++|.. ..|.+.++++++. ++. ++.|+.+. +..++++||
T Consensus 25 ~~k~vlv~f~-a~~C~~C~~-~~~~l~~l~~~~~--~v~-~~~vd~~~-----------------------~~~~~~~~~ 76 (112)
T 1syr_A 25 QNELVIVDFF-AEWCGPCKR-IAPFYEECSKTYT--KMV-FIKVDVDE-----------------------VSEVTEKEN 76 (112)
T ss_dssp HCSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEETTT-----------------------THHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHH-HHHHHHHHHHHcC--CCE-EEEEECCC-----------------------CHHHHHHcC
Confidence 4677888877 999999996 4799999988875 576 88777652 236778888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+.. .|+++++++|+++....+.
T Consensus 77 v~~----------~Pt~~~~~~G~~~~~~~G~ 98 (112)
T 1syr_A 77 ITS----------MPTFKVYKNGSSVDTLLGA 98 (112)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESC
T ss_pred CCc----------ccEEEEEECCcEEEEEeCC
Confidence 842 3335555699998877664
No 154
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.49 E-value=7.8e-11 Score=78.70 Aligned_cols=86 Identities=13% Similarity=0.173 Sum_probs=57.8
Q ss_pred CceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhH---HHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEE
Q psy5399 20 QTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGY---LAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRF 96 (156)
Q Consensus 20 g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~ 96 (156)
.+.++++. .+|++++|+|| ++||++|+.. .|.+ .++.+.+.. ++. ++.|..++.
T Consensus 9 ~~~~~~~~-~~~k~vlv~f~-a~wC~~C~~~-~~~~~~~~~~~~~~~~-~~~-~~~vd~~~~------------------ 65 (130)
T 2lst_A 9 PEALALAQ-AHGRMVMVYFH-SEHCPYCQQM-NTFVLSDPGVSRLLEA-RFV-VASVSVDTP------------------ 65 (130)
Confidence 66777777 67888888887 9999999964 6888 677766653 355 666655421
Q ss_pred EecCCchhHHhhCCeeeccCCCcceeeeEEEEEe--CCcE--EEEEEcc
Q psy5399 97 LADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD--DGKI--TQLNIEP 141 (156)
Q Consensus 97 ~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid--~G~I--~~~~~~~ 141 (156)
.+..++++||+. ..|+++++| +|++ +....+.
T Consensus 66 ---~~~~~~~~~~v~----------~~Pt~~~~d~~~G~~~~~~~~~G~ 101 (130)
T 2lst_A 66 ---EGQELARRYRVP----------GTPTFVFLVPKAGAWEEVGRLFGS 101 (130)
Confidence 234567777774 244477775 5888 5555543
No 155
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.94 E-value=3.3e-10 Score=76.49 Aligned_cols=72 Identities=17% Similarity=0.233 Sum_probs=53.1
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCC
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGV 110 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv 110 (156)
+++++|.|| ++||++|+. ..|.|.++++++.+ .+. ++.|+.+ .+..++++||+
T Consensus 38 ~k~~lv~f~-a~wC~~C~~-~~~~l~~l~~~~~~-~v~-~~~vd~~-----------------------~~~~l~~~~~v 90 (136)
T 2l5l_A 38 DKPAIVDFY-ADWCGPCKM-VAPILDELAKEYDG-QIV-IYKVDTE-----------------------KEQELAGAFGI 90 (136)
T ss_dssp SSCEEEEEE-CTTSHHHHH-HHHHHHHHHHHTTT-TCE-EEEEETT-----------------------TCHHHHHHTTC
T ss_pred CCEEEEEEE-CCcCHHHHH-HHHHHHHHHHHhcC-CEE-EEEEeCC-----------------------CCHHHHHHcCC
Confidence 577888887 999999996 47999999988863 366 7777654 23467888888
Q ss_pred eeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 111 EHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 111 ~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
. ..|+++++| +|+++ ...+
T Consensus 91 ~----------~~Pt~~~~~~~G~~~-~~~G 110 (136)
T 2l5l_A 91 R----------SIPSILFIPMEGKPE-MAQG 110 (136)
T ss_dssp C----------SSCEEEEECSSSCCE-EEES
T ss_pred C----------CCCEEEEECCCCcEE-EEeC
Confidence 4 244588887 99987 3443
No 156
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.94 E-value=6.6e-10 Score=75.42 Aligned_cols=77 Identities=16% Similarity=0.089 Sum_probs=57.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|+. ..|.+.++++++.+ .+. ++.|..+ .+..++++|+
T Consensus 23 ~~~~vlv~F~-a~wC~~C~~-~~~~l~~l~~~~~~-~v~-~~~vd~~-----------------------~~~~l~~~~~ 75 (140)
T 3hz4_A 23 SKKPVVVMFY-SPACPYCKA-MEPYFEEYAKEYGS-SAV-FGRINIA-----------------------TNPWTAEKYG 75 (140)
T ss_dssp CSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTT-TSE-EEEEETT-----------------------TCHHHHHHHT
T ss_pred CCCcEEEEEE-CCCChhHHH-HHHHHHHHHHHhCC-ceE-EEEEECC-----------------------cCHhHHHHCC
Confidence 4678888887 999999996 47999999999874 366 7777643 3456888899
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.. .|+++++.+|+++....+...
T Consensus 76 v~~----------~Pt~~~~~~G~~~~~~~G~~~ 99 (140)
T 3hz4_A 76 VQG----------TPTFKFFCHGRPVWEQVGQIY 99 (140)
T ss_dssp CCE----------ESEEEEEETTEEEEEEESSCC
T ss_pred CCc----------CCEEEEEeCCcEEEEEcCCCC
Confidence 842 444666679999888776543
No 157
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.94 E-value=7.4e-10 Score=74.02 Aligned_cols=73 Identities=11% Similarity=0.098 Sum_probs=55.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|.. ..|.|.++++++. ++. ++.|..+. +..++++|+
T Consensus 36 ~~k~vvv~F~-a~wC~~C~~-~~p~l~~l~~~~~--~v~-~~~vd~d~-----------------------~~~l~~~~~ 87 (125)
T 1r26_A 36 EDILTVAWFT-AVWCGPCKT-IERPMEKIAYEFP--TVK-FAKVDADN-----------------------NSEIVSKCR 87 (125)
T ss_dssp SSSCEEEEEE-CTTCHHHHH-THHHHHHHHHHCT--TSE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred cCCEEEEEEE-CCcCHhHHH-HHHHHHHHHHHCC--CCE-EEEEECCC-----------------------CHHHHHHcC
Confidence 6788888887 999999996 4799999998884 577 87777752 346888898
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
+.. .|+++++.+|+++....+
T Consensus 88 v~~----------~Pt~~i~~~G~~~~~~~G 108 (125)
T 1r26_A 88 VLQ----------LPTFIIARSGKMLGHVIG 108 (125)
T ss_dssp CCS----------SSEEEEEETTEEEEEEES
T ss_pred CCc----------ccEEEEEeCCeEEEEEeC
Confidence 842 334555569999887776
No 158
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.93 E-value=6.1e-10 Score=71.95 Aligned_cols=76 Identities=9% Similarity=0.120 Sum_probs=56.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|.. ..|.+.++++++.+ .+. ++.|..+ .+..++++|+
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~-~~~~~~~~~~~~~~-~v~-~~~vd~~-----------------------~~~~l~~~~~ 73 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQK-VTPVLEELRLNYEE-SFG-FYYVDVE-----------------------EEKTLFQRFS 73 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHH-HHHHHHHHHHHTTT-TSE-EEEEETT-----------------------TCHHHHHHTT
T ss_pred cCCEEEEEEe-CCCChhHHH-HHHHHHHHHHHcCC-ceE-EEEEECC-----------------------cChhHHHhcC
Confidence 4677888887 999999996 47999999988863 366 7777664 3346888888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+.. .|+++++++|+++....+..
T Consensus 74 v~~----------~Pt~~~~~~g~~~~~~~g~~ 96 (111)
T 3gnj_A 74 LKG----------VPQILYFKDGEYKGKMAGDV 96 (111)
T ss_dssp CCS----------SCEEEEEETTEEEEEEESSC
T ss_pred CCc----------CCEEEEEECCEEEEEEeccC
Confidence 842 44477778999988777643
No 159
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.93 E-value=7e-10 Score=72.83 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=55.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
+|++++|.|| ++||++|+. ..|.|.++++++. ++. ++.|+.+ .+..++++|+
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~-~~p~l~~~~~~~~--~v~-~~~vd~~-----------------------~~~~l~~~~~ 80 (114)
T 2oe3_A 29 QNDKLVIDFY-ATWCGPCKM-MQPHLTKLIQAYP--DVR-FVKCDVD-----------------------ESPDIAKECE 80 (114)
T ss_dssp HCSEEEEEEE-CTTCHHHHH-THHHHHHHHHHCT--TSE-EEEEETT-----------------------TCHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHCC--CCE-EEEEECC-----------------------CCHHHHHHCC
Confidence 4778888887 999999996 5799999998876 366 8877754 2346788888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+.. .|+++++.+|+++....+..
T Consensus 81 v~~----------~Pt~~~~~~G~~~~~~~G~~ 103 (114)
T 2oe3_A 81 VTA----------MPTFVLGKDGQLIGKIIGAN 103 (114)
T ss_dssp CCS----------BSEEEEEETTEEEEEEESSC
T ss_pred CCc----------ccEEEEEeCCeEEEEEeCCC
Confidence 842 33355556999988777643
No 160
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.93 E-value=2.6e-09 Score=71.05 Aligned_cols=77 Identities=8% Similarity=0.153 Sum_probs=52.6
Q ss_pred CCCeEEEEEeeCCCCC--------------CCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceE
Q psy5399 30 KGKKVIIFGVPGAFTP--------------GCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIR 95 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp--------------~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~ 95 (156)
+|++++|.|| ++||+ +|+. ..|.+.++++++.+ .+. ++.|+.+
T Consensus 20 ~~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~-~~p~~~~l~~~~~~-~~~-~~~vd~d------------------- 76 (123)
T 1oaz_A 20 ADGAILVDFW-AEWCGPIEESDDRRYDLVGPCKM-IAPILDEIADEYQG-KLT-VAKLNID------------------- 76 (123)
T ss_dssp CSSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCT-THHHHTTC--------CE-EEEEETT-------------------
T ss_pred CCCeEEEEEE-CCCCccccccccccccCCCCcHH-HHHHHHHHHHHhcC-CeE-EEEEECC-------------------
Confidence 5778888887 99999 9995 57999999888864 365 7776654
Q ss_pred EEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 96 FLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 96 ~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
.+..++++||+.. .|+++++.+|+++....+...
T Consensus 77 ----~~~~l~~~~~v~~----------~Pt~~~~~~G~~~~~~~G~~~ 110 (123)
T 1oaz_A 77 ----QNPGTAPKYGIRG----------IPTLLLFKNGEVAATKVGALS 110 (123)
T ss_dssp ----SCTTTGGGGTCCB----------SSEEEEEESSSEEEEEESCCC
T ss_pred ----CCHHHHHHcCCCc----------cCEEEEEECCEEEEEEeCCCC
Confidence 2356888999842 444777799999988776543
No 161
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.92 E-value=7e-10 Score=72.82 Aligned_cols=77 Identities=14% Similarity=0.191 Sum_probs=56.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|.. ..|.+.++++++.. ++. ++.|+.+. +..++++||
T Consensus 29 ~~~~~lv~f~-~~~C~~C~~-~~~~~~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 81 (121)
T 2i1u_A 29 SNKPVLVDFW-ATWCGPCKM-VAPVLEEIATERAT-DLT-VAKLDVDT-----------------------NPETARNFQ 81 (121)
T ss_dssp CSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTT-TCE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHH-HHHHHHHHHHHhcC-CeE-EEEEECCC-----------------------CHHHHHhcC
Confidence 4677888887 899999996 47999999888753 466 77777642 346778888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+.. .|+++++++|+++....+...
T Consensus 82 i~~----------~Pt~~~~~~g~~~~~~~G~~~ 105 (121)
T 2i1u_A 82 VVS----------IPTLILFKDGQPVKRIVGAKG 105 (121)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESCCC
T ss_pred CCc----------CCEEEEEECCEEEEEecCCCC
Confidence 842 344666679999888776543
No 162
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.92 E-value=6.6e-10 Score=71.64 Aligned_cols=74 Identities=4% Similarity=-0.069 Sum_probs=55.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|.. ..|.+.++++++. ++. ++.|+.+. +..++++||
T Consensus 20 ~~~~v~v~f~-a~wC~~C~~-~~~~~~~~~~~~~--~~~-~~~vd~~~-----------------------~~~~~~~~~ 71 (107)
T 1gh2_A 20 GSRLAVVKFT-MRGCGPCLR-IAPAFSSMSNKYP--QAV-FLEVDVHQ-----------------------CQGTAATNN 71 (107)
T ss_dssp TTSCEEEEEE-CSSCHHHHH-HHHHHHHHHHHCT--TSE-EEEEETTT-----------------------SHHHHHHTT
T ss_pred CCCEEEEEEE-CCCChhhHH-HHHHHHHHHHHCC--CcE-EEEEECcc-----------------------CHHHHHhcC
Confidence 5788888887 999999996 4799999998873 566 77776642 245778888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+.. .|+++++.+|+++....+.
T Consensus 72 v~~----------~Pt~~~~~~G~~~~~~~G~ 93 (107)
T 1gh2_A 72 ISA----------TPTFQFFRNKVRIDQYQGA 93 (107)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESS
T ss_pred CCc----------ccEEEEEECCeEEEEEeCC
Confidence 842 3436666899998877663
No 163
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.92 E-value=6.8e-10 Score=73.27 Aligned_cols=87 Identities=14% Similarity=0.056 Sum_probs=62.7
Q ss_pred CCCceeehhhHh--CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceE
Q psy5399 18 TPQTKIQIADAI--KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIR 95 (156)
Q Consensus 18 ~~g~~~~l~~~~--~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~ 95 (156)
.+|...++.+.+ .+++++|.|| ++||++|+. ..|.|.++++++ .++. ++.|+.+.
T Consensus 8 ~~g~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~-~~~~l~~l~~~~--~~v~-~~~vd~~~------------------ 64 (118)
T 2f51_A 8 FNGTHEALLNRIKEAPGLVLVDFF-ATWCGPCQR-LGQILPSIAEAN--KDVT-FIKVDVDK------------------ 64 (118)
T ss_dssp ECSCHHHHHHHHHHCSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHC--TTSE-EEEEETTT------------------
T ss_pred ecCCHHHHHHHHHhCCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHC--CCeE-EEEEECCC------------------
Confidence 455555665322 4778888887 999999996 479999999887 4677 88777652
Q ss_pred EEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeC----CcEEEEEEccC
Q psy5399 96 FLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDD----GKITQLNIEPD 142 (156)
Q Consensus 96 ~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~----G~I~~~~~~~~ 142 (156)
+..++++|++.. .|+++++++ |+++....+..
T Consensus 65 -----~~~~~~~~~i~~----------~Pt~~~~~~~~~~G~~~~~~~G~~ 100 (118)
T 2f51_A 65 -----NGNAADAYGVSS----------IPALFFVKKEGNEIKTLDQFVGAD 100 (118)
T ss_dssp -----CHHHHHHTTCCS----------SSEEEEEEEETTEEEEEEEEESCC
T ss_pred -----CHHHHHhcCCCC----------CCEEEEEeCCCCcceEEEeecCCC
Confidence 345788888842 444777776 99998887644
No 164
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.92 E-value=8.1e-10 Score=73.58 Aligned_cols=74 Identities=8% Similarity=0.082 Sum_probs=52.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|+. ..|.+.++++++.+. +. ++.|..+ .+..++++|+
T Consensus 34 ~~~~~lv~f~-a~wC~~C~~-~~~~~~~~~~~~~~~-~~-~~~vd~~-----------------------~~~~l~~~~~ 86 (130)
T 2dml_A 34 SDGLWLVEFY-APWCGHCQR-LTPEWKKAATALKDV-VK-VGAVNAD-----------------------KHQSLGGQYG 86 (130)
T ss_dssp CSSCEEEEEE-CTTCSTTGG-GHHHHHHHHHHTTTT-SE-EEEEETT-----------------------TCHHHHHHHT
T ss_pred CCCeEEEEEE-CCCCHHHHh-hCHHHHHHHHHhcCc-eE-EEEEeCC-----------------------CCHHHHHHcC
Confidence 3577888877 999999996 579999999888642 55 6666643 3457888898
Q ss_pred CeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
+. ..|++++++ +|+++..+.+
T Consensus 87 v~----------~~Pt~~~~~~~~~~~~~~~G 108 (130)
T 2dml_A 87 VQ----------GFPTIKIFGANKNKPEDYQG 108 (130)
T ss_dssp CC----------SSSEEEEESSCTTSCEECCS
T ss_pred CC----------ccCEEEEEeCCCCeEEEeec
Confidence 84 244478887 6664444443
No 165
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.45 E-value=1.2e-10 Score=74.36 Aligned_cols=76 Identities=12% Similarity=0.215 Sum_probs=52.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++|||+|.. ..|.+.++.+++.+ ++. ++.++.+ .+..++++||
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~-~~~~~~~~~~~~~~-~~~-~~~v~~~-----------------------~~~~~~~~~~ 70 (106)
T 2yj7_A 18 SDKPVLVDFW-APWCGPCRM-IAPIIEELAKEYEG-KVK-VVKVNVD-----------------------ENPNTAAQYG 70 (106)
Confidence 4677888877 999999996 47999999888864 355 5555543 2334667777
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+.. .|+++++++|+++....+..
T Consensus 71 v~~----------~Pt~~~~~~g~~~~~~~g~~ 93 (106)
T 2yj7_A 71 IRS----------IPTLLLFKNGQVVDRLVGAQ 93 (106)
Confidence 742 44466668888887665533
No 166
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.91 E-value=6.7e-10 Score=71.27 Aligned_cols=76 Identities=12% Similarity=0.162 Sum_probs=56.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++|||+|.. ..|.+.++++++.+ ++. ++.|+.+. +..++++|+
T Consensus 17 ~~~~~lv~f~-~~~C~~C~~-~~~~l~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 69 (109)
T 2yzu_A 17 QHPLVLVDFW-AEWCAPCRM-IAPILEEIAKEYEG-KLL-VAKLDVDE-----------------------NPKTAMRYR 69 (109)
T ss_dssp HCSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHTBT-TBE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHH-hhHHHHHHHHHhhC-ceE-EEEEECCC-----------------------CHhHHHhCC
Confidence 4678888887 999999996 47999999888753 365 77776542 346788888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
+.. .|+++++.+|+++....+..
T Consensus 70 v~~----------~Pt~~~~~~g~~~~~~~g~~ 92 (109)
T 2yzu_A 70 VMS----------IPTVILFKDGQPVEVLVGAQ 92 (109)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESCC
T ss_pred CCc----------CCEEEEEeCCcEeeeEeCCC
Confidence 842 44477778999998777644
No 167
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.91 E-value=2.3e-10 Score=77.19 Aligned_cols=77 Identities=5% Similarity=0.051 Sum_probs=53.9
Q ss_pred hhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchh
Q psy5399 25 IADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEF 104 (156)
Q Consensus 25 l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~ 104 (156)
+++ .+|++++|.|| ++||++|... .|.|.++.+++ ++. ++.|..+ .+..+
T Consensus 35 l~~-~~~k~vvv~F~-a~wC~~C~~~-~p~l~~l~~~~---~v~-~~~vd~~-----------------------~~~~l 84 (133)
T 3cxg_A 35 FSS-TQNSSIVIKFG-AVWCKPCNKI-KEYFKNQLNYY---YVT-LVDIDVD-----------------------IHPKL 84 (133)
T ss_dssp HTC--CCSEEEEEEE-CTTCHHHHHT-HHHHHGGGGTE---ECE-EEEEETT-----------------------TCHHH
T ss_pred HHh-cCCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHhc---CEE-EEEEecc-----------------------chHHH
Confidence 444 46788888887 9999999964 78888887665 455 6666543 24568
Q ss_pred HHhhCCeeeccCCCcceeeeEEEEE-e-CCc--EEEEEEcc
Q psy5399 105 TKKLGVEHEIPVLGGWRSKRYSMVV-D-DGK--ITQLNIEP 141 (156)
Q Consensus 105 ~~~~gv~~~~~~~~~~~~~~~~~ii-d-~G~--I~~~~~~~ 141 (156)
+++||+.. .|+++++ + +|+ ++....+.
T Consensus 85 ~~~~~v~~----------~Pt~~~~~~~~g~g~~~~~~~G~ 115 (133)
T 3cxg_A 85 NDQHNIKA----------LPTFEFYFNLNNEWVLVHTVEGA 115 (133)
T ss_dssp HHHTTCCS----------SSEEEEEEEETTEEEEEEEEESC
T ss_pred HHhcCCCC----------CCEEEEEEecCCCeEEEEEEcCC
Confidence 88999842 4447777 4 887 77777664
No 168
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=6.6e-10 Score=73.79 Aligned_cols=71 Identities=13% Similarity=0.179 Sum_probs=51.9
Q ss_pred hHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHH
Q psy5399 27 DAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTK 106 (156)
Q Consensus 27 ~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~ 106 (156)
+..++ +++|.|| ++||++|+. ..|.+.++++++.+.++. ++.|..+ .+..+++
T Consensus 19 ~~~~~-~vlv~f~-a~wC~~C~~-~~p~~~~~~~~~~~~~v~-~~~vd~~-----------------------~~~~~~~ 71 (126)
T 1x5e_A 19 ELLEG-DWMIEFY-APWCPACQN-LQPEWESFAEWGEDLEVN-IAKVDVT-----------------------EQPGLSG 71 (126)
T ss_dssp HHTSS-EEEEEEE-CSSCHHHHH-HHHHHHHHHHHHGGGTCE-EEEEETT-----------------------TCHHHHH
T ss_pred HHhCC-CEEEEEE-CCCCHHHHH-HhHHHHHHHHHhccCCeE-EEEEECc-----------------------CCHHHHH
Confidence 43455 4777776 999999996 479999999998765677 7777654 2345888
Q ss_pred hhCCeeeccCCCcceeeeEEEEEeCCcE
Q psy5399 107 KLGVEHEIPVLGGWRSKRYSMVVDDGKI 134 (156)
Q Consensus 107 ~~gv~~~~~~~~~~~~~~~~~iid~G~I 134 (156)
+|++.. .|+++++.+|++
T Consensus 72 ~~~v~~----------~Pt~~~~~~G~~ 89 (126)
T 1x5e_A 72 RFIINA----------LPTIYHCKDGEF 89 (126)
T ss_dssp HTTCCS----------SSEEEEEETTEE
T ss_pred HcCCcc----------cCEEEEEeCCeE
Confidence 888842 444777789985
No 169
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.91 E-value=8.4e-10 Score=72.06 Aligned_cols=73 Identities=21% Similarity=0.274 Sum_probs=54.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++|||+|.. ..|.+.++.++++ ++. ++.|+.+ .+..++++||
T Consensus 27 ~~~~~vv~f~-~~~C~~C~~-~~~~l~~~~~~~~--~~~-~~~v~~~-----------------------~~~~~~~~~~ 78 (118)
T 2vm1_A 27 TGKLVIIDFT-ASWCGPCRV-IAPVFAEYAKKFP--GAI-FLKVDVD-----------------------ELKDVAEAYN 78 (118)
T ss_dssp HTCCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEETT-----------------------TSHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHhHHH-HhHHHHHHHHHCC--CcE-EEEEEcc-----------------------cCHHHHHHcC
Confidence 4788888887 899999996 4799999988875 566 7777664 2456788888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
+.. .|+++++++|+++....+
T Consensus 79 v~~----------~Pt~~~~~~g~~~~~~~g 99 (118)
T 2vm1_A 79 VEA----------MPTFLFIKDGEKVDSVVG 99 (118)
T ss_dssp CCS----------BSEEEEEETTEEEEEEES
T ss_pred CCc----------CcEEEEEeCCeEEEEecC
Confidence 842 344566679999887766
No 170
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.89 E-value=6.4e-10 Score=72.07 Aligned_cols=73 Identities=15% Similarity=0.286 Sum_probs=53.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|.. ..+.+.++.++++ ++. ++.|+.+ .+..++++||
T Consensus 25 ~~~~~vv~f~-~~~C~~C~~-~~~~l~~~~~~~~--~v~-~~~v~~~-----------------------~~~~~~~~~~ 76 (113)
T 1ti3_A 25 SQKLIVVDFT-ASWCPPCKM-IAPIFAELAKKFP--NVT-FLKVDVD-----------------------ELKAVAEEWN 76 (113)
T ss_dssp SSSEEEEEEE-CSSCHHHHH-HHHHHHHHHHHCS--SEE-EEEEETT-----------------------TCHHHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHH-HHHHHHHHHHhCC--CcE-EEEEEcc-----------------------ccHHHHHhCC
Confidence 4777888877 899999996 4799988888775 565 6766653 2346778888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
+.. .|+++++++|+++....+
T Consensus 77 v~~----------~Pt~~~~~~G~~~~~~~g 97 (113)
T 1ti3_A 77 VEA----------MPTFIFLKDGKLVDKTVG 97 (113)
T ss_dssp CSS----------TTEEEEEETTEEEEEEEC
T ss_pred CCc----------ccEEEEEeCCEEEEEEec
Confidence 842 333666679999988776
No 171
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.88 E-value=1.3e-09 Score=70.90 Aligned_cols=75 Identities=17% Similarity=0.155 Sum_probs=54.6
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
.++++++|+|| ++|||+|.. ..|.+.++.+++. ++. ++.|..+. +..++++|
T Consensus 17 ~~~~~~vv~f~-a~wC~~C~~-~~~~l~~~~~~~~--~v~-~~~vd~~~-----------------------~~~l~~~~ 68 (110)
T 2l6c_A 17 EGLSDAIVFFH-KNLCPHCKN-MEKVLDKFGARAP--QVA-ISSVDSEA-----------------------RPELMKEL 68 (110)
T ss_dssp TTCSEEEEEEE-CSSCSTHHH-HHHHHHHHHTTCT--TSC-EEEEEGGG-----------------------CHHHHHHT
T ss_pred HcCCCEEEEEE-CCCCHhHHH-HHHHHHHHHHHCC--CcE-EEEEcCcC-----------------------CHHHHHHc
Confidence 45677877777 999999996 4788888887764 566 77666542 34578888
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
|+.. .|+++++.+|+++....+.
T Consensus 69 ~v~~----------~Pt~~~~~~G~~v~~~~G~ 91 (110)
T 2l6c_A 69 GFER----------VPTLVFIRDGKVAKVFSGI 91 (110)
T ss_dssp TCCS----------SCEEEEEESSSEEEEEESC
T ss_pred CCcc----------cCEEEEEECCEEEEEEcCC
Confidence 8842 4447777899998887764
No 172
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.88 E-value=2.4e-09 Score=70.27 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=53.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.|++++|+|| ++|||+|+. ..|.+.++++++. .. +..+..+..... +....++++||
T Consensus 28 ~~~~~~v~f~-a~wC~~C~~-~~p~l~~~~~~~~---~~-v~~~~~~~~~~~-----------------~~~~~~~~~~~ 84 (118)
T 1zma_A 28 KKETATFFIG-RKTCPYCRK-FAGTLSGVVAETK---AH-IYFINSEEPSQL-----------------NDLQAFRSRYG 84 (118)
T ss_dssp TTCCEEEEEE-CTTCHHHHH-HHHHHHHHHHHHC---CC-CEEEETTCGGGH-----------------HHHHHHHHHHT
T ss_pred CCCeEEEEEE-CCCCccHHH-HHHHHHHHHHhcC---Ce-EEEEECCCcCcH-----------------HHHHHHHHHcC
Confidence 5678888887 999999996 4799999988763 55 777766532211 11235778888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
+.. .|+++++++|+++....+
T Consensus 85 i~~----------~Pt~~~~~~G~~~~~~~G 105 (118)
T 1zma_A 85 IPT----------VPGFVHITDGQINVRCDS 105 (118)
T ss_dssp CCS----------SCEEEEEETTEEEEECCT
T ss_pred CCC----------CCeEEEEECCEEEEEecC
Confidence 842 344777789998866544
No 173
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.87 E-value=9.4e-10 Score=71.75 Aligned_cols=70 Identities=17% Similarity=0.278 Sum_probs=49.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcC--CCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHh
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKG--IHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKK 107 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~--~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~ 107 (156)
++++++|.|| ++||++|.. ..|.+.++++++++.+ +. ++.+..+ .+..++++
T Consensus 23 ~~~~~lv~f~-~~~C~~C~~-~~~~~~~~~~~~~~~~~~v~-~~~vd~~-----------------------~~~~~~~~ 76 (120)
T 1mek_A 23 AHKYLLVEFY-APWCGHCKA-LAPEYAKAAGKLKAEGSEIR-LAKVDAT-----------------------EESDLAQQ 76 (120)
T ss_dssp HCSEEEEEEE-CSSCSTTST-THHHHHHHHHTTTTTCCCCB-CEEEETT-----------------------TCCSSHHH
T ss_pred cCCeEEEEEE-CCCCHHHHH-hhHHHHHHHHHHhccCCcEE-EEEEcCC-----------------------CCHHHHHH
Confidence 5777888777 999999995 5799999998887543 33 4444432 23468889
Q ss_pred hCCeeeccCCCcceeeeEEEEEeCCcEE
Q psy5399 108 LGVEHEIPVLGGWRSKRYSMVVDDGKIT 135 (156)
Q Consensus 108 ~gv~~~~~~~~~~~~~~~~~iid~G~I~ 135 (156)
||+.. .|+++++.+|+++
T Consensus 77 ~~v~~----------~Pt~~~~~~g~~~ 94 (120)
T 1mek_A 77 YGVRG----------YPTIKFFRNGDTA 94 (120)
T ss_dssp HTCCS----------SSEEEEEESSCSS
T ss_pred CCCCc----------ccEEEEEeCCCcC
Confidence 99842 4447777888765
No 174
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.87 E-value=2.2e-09 Score=73.91 Aligned_cols=74 Identities=8% Similarity=0.081 Sum_probs=56.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|.|| ++||++|+. ..|.+.++++++. ++. ++.|..+. +..++++||
T Consensus 31 ~~~~vvv~F~-a~wC~~C~~-~~p~l~~l~~~~~--~v~-~~~vd~~~-----------------------~~~l~~~~~ 82 (153)
T 2wz9_A 31 AKSLLVVHFW-APWAPQCAQ-MNEVMAELAKELP--QVS-FVKLEAEG-----------------------VPEVSEKYE 82 (153)
T ss_dssp TTSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHCT--TSE-EEEEETTT-----------------------SHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHhHHH-HHHHHHHHHHHcC--CeE-EEEEECCC-----------------------CHHHHHHcC
Confidence 3788888887 999999996 4799999988873 576 77777652 346888888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+.. .|+++++++|+++....+.
T Consensus 83 v~~----------~Pt~~~~~~G~~~~~~~G~ 104 (153)
T 2wz9_A 83 ISS----------VPTFLFFKNSQKIDRLDGA 104 (153)
T ss_dssp CCS----------SSEEEEEETTEEEEEEESS
T ss_pred CCC----------CCEEEEEECCEEEEEEeCC
Confidence 842 4447888899998877663
No 175
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.85 E-value=1.8e-09 Score=73.79 Aligned_cols=75 Identities=13% Similarity=0.122 Sum_probs=54.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|+. ..|.+.++++++.+ .+. ++.|+.+ .+..++++||
T Consensus 22 ~~k~vlv~F~-a~wC~~C~~-~~p~l~~l~~~~~~-~v~-~~~vd~d-----------------------~~~~~~~~~~ 74 (142)
T 1qgv_A 22 EDRVVVIRFG-HDWDPTCMK-MDEVLYSIAEKVKN-FAV-IYLVDIT-----------------------EVPDFNKMYE 74 (142)
T ss_dssp SSSEEEEEEE-CTTSHHHHH-HHHHHHHHHHHHTT-TEE-EEEEETT-----------------------TCCTTTTSSC
T ss_pred CCCEEEEEEE-CCCCHHHHH-HHHHHHHHHHHhCC-CeE-EEEEccc-----------------------cCHHHHHHcC
Confidence 4788888887 999999996 47999999998853 355 7777655 1234678888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+. ..|+++++++|+++...++.
T Consensus 75 i~----------~~Pt~~~~~~G~~v~~~~g~ 96 (142)
T 1qgv_A 75 LY----------DPCTVMFFFRNKHIMIDLGT 96 (142)
T ss_dssp SC----------SSCEEEEEETTEEEEEECC-
T ss_pred CC----------CCCEEEEEECCcEEEEecCC
Confidence 84 24447777899998876543
No 176
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.82 E-value=2.8e-10 Score=82.45 Aligned_cols=85 Identities=11% Similarity=0.058 Sum_probs=58.8
Q ss_pred CCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEE
Q psy5399 18 TPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFL 97 (156)
Q Consensus 18 ~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~ 97 (156)
.++..+.... .++++++|.|| ++||++|.. ..|.+.++++++.+ .+. ++.|+.+
T Consensus 102 l~~~~f~~~~-~~~~~vlv~F~-a~wC~~C~~-~~p~~~~l~~~~~~-~v~-~~~vd~~--------------------- 155 (210)
T 3apq_A 102 LERREFDAAV-NSGELWFVNFY-SPGCSHCHD-LAPTWREFAKEVDG-LLR-IGAVNCG--------------------- 155 (210)
T ss_dssp CCHHHHHHHH-HHSCCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTBT-TBE-EEEEETT---------------------
T ss_pred ecHHHHHHHH-ccCCcEEEEEe-CCCChhHHH-HHHHHHHHHHHhcC-ceE-EEEEECC---------------------
Confidence 4444444443 46788888887 999999996 47999999988853 355 6666643
Q ss_pred ecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 98 ADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 98 ~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
.+..++++||+.. .|+++++.+|+++....+
T Consensus 156 --~~~~l~~~~~v~~----------~Pt~~~~~~G~~~~~~~G 186 (210)
T 3apq_A 156 --DDRMLCRMKGVNS----------YPSLFIFRSGMAAVKYNG 186 (210)
T ss_dssp --TCHHHHHHTTCCS----------SSEEEEECTTSCCEECCS
T ss_pred --ccHHHHHHcCCCc----------CCeEEEEECCCceeEecC
Confidence 2346778888842 344677789988766555
No 177
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.81 E-value=8.7e-10 Score=73.72 Aligned_cols=54 Identities=15% Similarity=0.065 Sum_probs=36.8
Q ss_pred cCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH
Q psy5399 8 TLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA 64 (156)
Q Consensus 8 ~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~ 64 (156)
..++-.+. ..++..+...-.-++++++|.|| ++||++|+. ..|.|.++++++..
T Consensus 3 ~~~~~~v~-~l~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~-~~p~~~~~~~~~~~ 56 (133)
T 2dj3_A 3 SGSSGPVK-VVVGKTFDAIVMDPKKDVLIEFY-APWCGHCKQ-LEPIYTSLGKKYKG 56 (133)
T ss_dssp CCSSCSSE-ECCTTTCCCCCTCTTSEEEEEEC-CTTCSHHHH-HHHHHHHHHHHHTT
T ss_pred ccCCCceE-EEcCCCHHHHhccCCCcEEEEEE-CCCChhHHH-HHHHHHHHHHHhcC
Confidence 33444444 35555554432113778888887 999999996 47999999999874
No 178
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.79 E-value=1.2e-08 Score=62.68 Aligned_cols=62 Identities=15% Similarity=0.129 Sum_probs=44.6
Q ss_pred EEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCeee
Q psy5399 34 VIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEHE 113 (156)
Q Consensus 34 vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~ 113 (156)
.++.|| ++|||+|.. ..|.+.++++++.+ ++. ++.++.+ .+..++++||+..
T Consensus 4 ~vv~f~-~~~C~~C~~-~~~~l~~~~~~~~~-~~~-~~~vd~~-----------------------~~~~~~~~~~v~~- 55 (85)
T 1nho_A 4 NIEVFT-SPTCPYCPM-AIEVVDEAKKEFGD-KID-VEKIDIM-----------------------VDREKAIEYGLMA- 55 (85)
T ss_dssp CEEEES-CSSSCCSTT-HHHHHHHHHHHHCS-SCC-EEEECTT-----------------------TCGGGGGGTCSSC-
T ss_pred EEEEEE-CCCCcchHH-HHHHHHHHHHHhcC-CeE-EEEEECC-----------------------CCHHHHHhCCcee-
Confidence 456665 999999995 57999999888853 466 7777664 3346888898842
Q ss_pred ccCCCcceeeeEEEEEeCCcE
Q psy5399 114 IPVLGGWRSKRYSMVVDDGKI 134 (156)
Q Consensus 114 ~~~~~~~~~~~~~~iid~G~I 134 (156)
.|++++ +|++
T Consensus 56 ---------~Pt~~~--~G~~ 65 (85)
T 1nho_A 56 ---------VPAIAI--NGVV 65 (85)
T ss_dssp ---------SSEEEE--TTTE
T ss_pred ---------eCEEEE--CCEE
Confidence 333555 8998
No 179
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.78 E-value=3.8e-09 Score=77.22 Aligned_cols=81 Identities=14% Similarity=0.143 Sum_probs=57.2
Q ss_pred CCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcC--CCEEEEEecCCHHHHHHHHHHcCCCcceE
Q psy5399 18 TPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKG--IHEIFCIAVNDAFVMEAWCRKNNAEGKIR 95 (156)
Q Consensus 18 ~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~--~~~v~~is~d~~~~~~~~~~~~~~~~~f~ 95 (156)
.+++.+...- .+|++++|.|| ++||++|+. ..|.+.++++++++.+ +. ++.|..+
T Consensus 20 l~~~~~~~~~-~~~~~v~v~F~-a~wC~~C~~-~~p~~~~~~~~~~~~~~~~~-~~~vd~~------------------- 76 (241)
T 3idv_A 20 LNDANFDNFV-ADKDTVLLEFY-APWCGHCKQ-FAPEYEKIANILKDKDPPIP-VAKIDAT------------------- 76 (241)
T ss_dssp ECTTTHHHHH-TTCSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHHTSSSCCC-EEEEETT-------------------
T ss_pred ecccCHHHHH-hcCCeEEEEEE-CCCCHHHHH-hhHHHHHHHHHHhhcCCceE-EEEEecc-------------------
Confidence 3444444333 46788888887 999999996 5799999999998665 55 6666543
Q ss_pred EEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEE
Q psy5399 96 FLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKIT 135 (156)
Q Consensus 96 ~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~ 135 (156)
.+..++++||+.. .|+++++++|+++
T Consensus 77 ----~~~~l~~~~~v~~----------~Pt~~~~~~g~~~ 102 (241)
T 3idv_A 77 ----SASVLASRFDVSG----------YPTIKILKKGQAV 102 (241)
T ss_dssp ----TCHHHHHHTTCCS----------SSEEEEEETTEEE
T ss_pred ----CCHHHHHhcCCCc----------CCEEEEEcCCCcc
Confidence 3456888888842 3447777877766
No 180
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.77 E-value=4.2e-09 Score=71.22 Aligned_cols=88 Identities=8% Similarity=0.107 Sum_probs=54.6
Q ss_pred CCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEE
Q psy5399 18 TPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFL 97 (156)
Q Consensus 18 ~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~ 97 (156)
.+++.+.-.- .+++.++|+|| ++||++|... .|.+.++++++.+ ++. ++.|+.+.
T Consensus 38 l~~~~~~~~~-~~~~~vvv~f~-~~~C~~C~~~-~~~l~~l~~~~~~-~v~-~~~vd~~~-------------------- 92 (140)
T 1v98_A 38 ADEKGFAQEV-AGAPLTLVDFF-APWCGPCRLV-SPILEELARDHAG-RLK-VVKVNVDE-------------------- 92 (140)
T ss_dssp ------------CCCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TEE-EEEEETTT--------------------
T ss_pred CCHHHHHHHH-HcCCCEEEEEE-CCCCHHHHHH-HHHHHHHHHHccC-ceE-EEEEECCC--------------------
Confidence 3444444322 23445666666 9999999964 7999999988864 355 67766542
Q ss_pred ecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 98 ADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 98 ~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+..++++|++.. .|+++++.+|+++....+...
T Consensus 93 ---~~~l~~~~~v~~----------~Pt~~~~~~G~~~~~~~G~~~ 125 (140)
T 1v98_A 93 ---HPGLAARYGVRS----------VPTLVLFRRGAPVATWVGASP 125 (140)
T ss_dssp ---CHHHHHHTTCCS----------SSEEEEEETTEEEEEEESCCC
T ss_pred ---CHHHHHHCCCCc----------cCEEEEEeCCcEEEEEeCCCC
Confidence 346788888842 344677789999987776543
No 181
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.76 E-value=7.6e-10 Score=73.56 Aligned_cols=73 Identities=22% Similarity=0.273 Sum_probs=52.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++++|+|| ++||++|.. ..|.|.++.++++ ++. ++.|+.+ .+..++++||
T Consensus 35 ~~~~~vv~f~-~~~C~~C~~-~~~~l~~~~~~~~--~v~-~~~v~~~-----------------------~~~~~~~~~~ 86 (130)
T 1wmj_A 35 AGKVVIIDFT-ASWCGPCRF-IAPVFAEYAKKFP--GAV-FLKVDVD-----------------------ELKEVAEKYN 86 (130)
T ss_dssp TTCBCBEECC-SSSCSCSSS-SHHHHHHHHHHCT--TBC-CEECCTT-----------------------TSGGGHHHHT
T ss_pred cCCEEEEEEE-CCCChhHHH-HHHHHHHHHHHCC--CCE-EEEEecc-----------------------chHHHHHHcC
Confidence 5788888887 999999996 5799999988875 566 6666653 3456888888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
+.. .|+++++.+|+++....+
T Consensus 87 v~~----------~Pt~~~~~~g~~~~~~~g 107 (130)
T 1wmj_A 87 VEA----------MPTFLFIKDGAEADKVVG 107 (130)
T ss_dssp CCS----------SCCCCBCTTTTCCBCCCT
T ss_pred CCc----------cceEEEEeCCeEEEEEeC
Confidence 842 333444468988765544
No 182
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.75 E-value=2e-09 Score=69.42 Aligned_cols=77 Identities=14% Similarity=0.113 Sum_probs=52.2
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHc--CCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHH
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAK--GIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTK 106 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~--~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~ 106 (156)
.++++++|.|| ++||++|+. ..|.+.++.+++.+. ++. ++.+..+ .+..+++
T Consensus 19 ~~~~~~lv~f~-~~~C~~C~~-~~~~~~~~~~~~~~~~~~~~-~~~vd~~-----------------------~~~~l~~ 72 (111)
T 3uvt_A 19 IAEGITFIKFY-APWCGHCKT-LAPTWEELSKKEFPGLAGVK-IAEVDCT-----------------------AERNICS 72 (111)
T ss_dssp HHSSEEEEEEE-CSSCHHHHH-HHHHHHHHHTCCCCC-CCEE-EEEEETT-----------------------TCHHHHH
T ss_pred hcCCcEEEEEE-CCCChhHHH-hhHHHHHHHHHhhccCCceE-EEEEecc-----------------------ccHhHHH
Confidence 34777888777 999999996 478888888776433 333 4444432 3345788
Q ss_pred hhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 107 KLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 107 ~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
+|++.. .|+++++++|+++..+.+.
T Consensus 73 ~~~v~~----------~Pt~~~~~~g~~~~~~~g~ 97 (111)
T 3uvt_A 73 KYSVRG----------YPTLLLFRGGKKVSEHSGG 97 (111)
T ss_dssp HTTCCS----------SSEEEEEETTEEEEEECSC
T ss_pred hcCCCc----------ccEEEEEeCCcEEEeccCC
Confidence 888842 3446666899988776653
No 183
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.74 E-value=4.3e-10 Score=79.20 Aligned_cols=46 Identities=13% Similarity=0.274 Sum_probs=36.7
Q ss_pred hhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 25 IADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 25 l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
+++ ++|++++|.|| ++|||+|+. .+|.|.++++++. ++. ++.|+.|
T Consensus 49 l~~-~~~k~vvv~F~-A~WC~pC~~-~~P~l~~l~~~~~--~v~-~~~v~~d 94 (167)
T 1z6n_A 49 LQR-IERRYRLLVAG-EMWCPDCQI-NLAALDFAQRLQP--NIE-LAIISKG 94 (167)
T ss_dssp HHT-CCSCEEEEEEC-CTTCHHHHH-HHHHHHHHHHHCT--TEE-EEEECHH
T ss_pred HHH-hCCCEEEEEEE-CCCChhHHH-HHHHHHHHHHHCC--CcE-EEEEECC
Confidence 455 57888888877 999999996 5899999998764 566 7777765
No 184
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.72 E-value=1.3e-08 Score=62.52 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=29.7
Q ss_pred CeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 32 KKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 32 k~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
.++++.|| ++|||+|.. ..|.+.++++++. .++. ++.++.+
T Consensus 3 ~~~vv~f~-~~~C~~C~~-~~~~l~~~~~~~~-~~~~-~~~vd~~ 43 (85)
T 1fo5_A 3 KVKIELFT-SPMCPHCPA-AKRVVEEVANEMP-DAVE-VEYINVM 43 (85)
T ss_dssp CEEEEEEE-CCCSSCCCT-HHHHHHHHHHHCS-SSEE-EEEEESS
T ss_pred ceEEEEEe-CCCCCchHH-HHHHHHHHHHHcC-CceE-EEEEECC
Confidence 34566665 999999995 5799999888775 2455 6666664
No 185
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.69 E-value=2.3e-08 Score=72.52 Aligned_cols=77 Identities=12% Similarity=-0.028 Sum_probs=54.2
Q ss_pred CCeE-EEEEeeCCCCCCCCcCChhhHHHhHHHHHHc---CCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHH
Q psy5399 31 GKKV-IIFGVPGAFTPGCSVTHLPGYLAKEKDLKAK---GIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTK 106 (156)
Q Consensus 31 gk~v-vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~---~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~ 106 (156)
++++ +|.|| ++||++|+. ..|.+.++++++.+. ++. ++.|..+ .+..+++
T Consensus 133 ~~~~~~v~F~-a~wC~~C~~-~~p~~~~l~~~~~~~~~~~v~-~~~vd~~-----------------------~~~~l~~ 186 (226)
T 1a8l_A 133 DQDVRILVFV-TPTCPYCPL-AVRMAHKFAIENTKAGKGKIL-GDMVEAI-----------------------EYPEWAD 186 (226)
T ss_dssp CSCEEEEEEE-CSSCTTHHH-HHHHHHHHHHHHHHTTCCCEE-EEEEEGG-----------------------GCHHHHH
T ss_pred CCCcEEEEEe-CCCCCccHH-HHHHHHHHHHhcccccCCcEE-EEEEEcc-----------------------cCHHHHH
Confidence 4556 66666 999999996 579999999998742 454 5555543 2356788
Q ss_pred hhCCeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 107 KLGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 107 ~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+||+.. .|+++++++|+++..+.+...
T Consensus 187 ~~~v~~----------~Pt~~~~~~G~~~~~~~G~~~ 213 (226)
T 1a8l_A 187 QYNVMA----------VPKIVIQVNGEDRVEFEGAYP 213 (226)
T ss_dssp HTTCCS----------SCEEEEEETTEEEEEEESCCC
T ss_pred hCCCcc----------cCeEEEEeCCceeEEEcCCCC
Confidence 899842 344666679998887776544
No 186
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.68 E-value=1.8e-08 Score=70.00 Aligned_cols=74 Identities=14% Similarity=0.120 Sum_probs=52.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++|||.|| ++||++|+.. -|.|.++++++.+. +. |+-|.. |....++..|+
T Consensus 40 ~~k~VVVdF~-A~WCgPCk~m-~PvleelA~e~~~~-v~-f~kVDV-----------------------De~~e~a~~y~ 92 (160)
T 2av4_A 40 DERLVCIRFG-HDYDPDCMKM-DELLYKVADDIKNF-CV-IYLVDI-----------------------TEVPDFNTMYE 92 (160)
T ss_dssp SSSEEEEEEE-CTTSHHHHHH-HHHHHHHHHHHTTT-EE-EEEEET-----------------------TTCCTTTTTTT
T ss_pred CCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHccCC-cE-EEEEEC-----------------------CCCHHHHHHcC
Confidence 3567888877 9999999976 59999999998532 33 444443 34566889999
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
|.. .|+++++.+|+.+.+.++
T Consensus 93 V~s----------iPT~~fFk~G~~v~vd~G 113 (160)
T 2av4_A 93 LYD----------PVSVMFFYRNKHMMIDLG 113 (160)
T ss_dssp CCS----------SEEEEEEETTEEEEEECS
T ss_pred CCC----------CCEEEEEECCEEEEEecC
Confidence 942 344666789998865543
No 187
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.64 E-value=7.9e-09 Score=76.95 Aligned_cols=86 Identities=8% Similarity=0.086 Sum_probs=57.9
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCC
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGV 110 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv 110 (156)
+++|||.|| ++||++|... .|.|.+++++|. ++. ++.|..+. . .++..|++
T Consensus 133 ~k~VvV~Fy-a~wC~~Ck~l-~p~l~~La~~~~--~v~-f~kVd~d~----------~--------------~l~~~~~I 183 (245)
T 1a0r_P 133 ITTIVVHIY-EDGIKGCDAL-NSSLICLAAEYP--MVK-FCKIKASN----------T--------------GAGDRFSS 183 (245)
T ss_dssp TCEEEEEEE-CTTSTTHHHH-HHHHHHHHHHCT--TSE-EEEEEHHH----------H--------------CCTTSSCT
T ss_pred CCEEEEEEE-CCCChHHHHH-HHHHHHHHHHCC--CCE-EEEEeCCc----------H--------------HHHHHCCC
Confidence 678888888 9999999965 799999999986 466 77776542 0 13456676
Q ss_pred eeeccCCCcceeeeEEEEEeCCcEEEEEEccCC---Cceeecchhhhh
Q psy5399 111 EHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG---TGLTCSLVDELK 155 (156)
Q Consensus 111 ~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~---~~~~~~~~~~~l 155 (156)
. ..|+++++++|+++...++... ..++..+++.+|
T Consensus 184 ~----------~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L 221 (245)
T 1a0r_P 184 D----------VLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFL 221 (245)
T ss_dssp T----------TCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHH
T ss_pred C----------CCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHH
Confidence 3 1344677789999888765422 223444455444
No 188
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.61 E-value=6.2e-09 Score=70.32 Aligned_cols=71 Identities=15% Similarity=0.068 Sum_probs=49.8
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCC
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGV 110 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv 110 (156)
|++++|+|| ++||++|+.. .|.|.++++++. ++. ++.|..+.. .++|++
T Consensus 30 ~~~vvv~f~-a~wC~~C~~~-~p~l~~la~~~~--~v~-~~~vd~~~~--------------------------~~~~~i 78 (135)
T 2dbc_A 30 DLWVVIHLY-RSSVPMCLVV-NQHLSVLARKFP--ETK-FVKAIVNSC--------------------------IEHYHD 78 (135)
T ss_dssp SCEEEEEEC-CTTCHHHHHH-HHHHHHHHHHCS--SEE-EEEECCSSS--------------------------CSSCCS
T ss_pred CCEEEEEEE-CCCChHHHHH-HHHHHHHHHHCC--CcE-EEEEEhhcC--------------------------cccCCC
Confidence 467888887 9999999964 799999988873 455 666655421 045666
Q ss_pred eeeccCCCcceeeeEEEEEeCCcEEEEEEccC
Q psy5399 111 EHEIPVLGGWRSKRYSMVVDDGKITQLNIEPD 142 (156)
Q Consensus 111 ~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~ 142 (156)
. ..|+++++++|+++....+..
T Consensus 79 ~----------~~Pt~~~~~~G~~v~~~~G~~ 100 (135)
T 2dbc_A 79 N----------CLPTIFVYKNGQIEGKFIGII 100 (135)
T ss_dssp S----------CCSEEEEESSSSCSEEEESTT
T ss_pred C----------CCCEEEEEECCEEEEEEEeEE
Confidence 3 244477778999988887654
No 189
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.58 E-value=1.6e-08 Score=67.10 Aligned_cols=72 Identities=24% Similarity=0.398 Sum_probs=52.1
Q ss_pred CCCeEEEEEeeCC-------CCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCc
Q psy5399 30 KGKKVIIFGVPGA-------FTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNL 102 (156)
Q Consensus 30 ~gk~vvl~f~~~~-------~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~ 102 (156)
++++++|.|| ++ |||+|+. ..|.+.++++++++ ++. ++.|..++... | .|.+.
T Consensus 23 ~~~~v~v~F~-a~~~~~~~~wC~~C~~-~~p~l~~~~~~~~~-~~~-~~~vd~~~~~~---~-------------~d~~~ 82 (123)
T 1wou_A 23 NGKTIFAYFT-GSKDAGGKSWCPDCVQ-AEPVVREGLKHISE-GCV-FIYCQVGEKPY---W-------------KDPNN 82 (123)
T ss_dssp TTSEEEEEEE-CCBCTTCCBSCHHHHH-HHHHHHHHGGGCCT-TEE-EEEEECCCHHH---H-------------HCTTC
T ss_pred CCCEEEEEEE-ccCCCCCCCcCHHHHH-hhHHHHHHHHHcCC-CcE-EEEEECCCchh---h-------------hchhH
Confidence 5788888887 88 9999996 47999999887753 466 77887775431 1 25567
Q ss_pred hhHHhhCCeeeccCCCcceeeeEEEEEeC
Q psy5399 103 EFTKKLGVEHEIPVLGGWRSKRYSMVVDD 131 (156)
Q Consensus 103 ~~~~~~gv~~~~~~~~~~~~~~~~~iid~ 131 (156)
.++++|++.. .|+++++++
T Consensus 83 ~~~~~~~i~~----------~Pt~~~~~~ 101 (123)
T 1wou_A 83 DFRKNLKVTA----------VPTLLKYGT 101 (123)
T ss_dssp HHHHHHCCCS----------SSEEEETTS
T ss_pred HHHHHCCCCe----------eCEEEEEcC
Confidence 8889999842 344666674
No 190
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.56 E-value=2.1e-08 Score=68.42 Aligned_cols=78 Identities=8% Similarity=-0.017 Sum_probs=55.1
Q ss_pred CCCeEEEEEeeCCC--CCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHh
Q psy5399 30 KGKKVIIFGVPGAF--TPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKK 107 (156)
Q Consensus 30 ~gk~vvl~f~~~~~--cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~ 107 (156)
.++++||.| ++.| |+.|+.. .|.|.++.++|.++.+. |+-|. .|.+..++.+
T Consensus 33 ~~~~vlVdF-~a~~crCgpCk~i-aPvleela~e~~g~~v~-~~KVd-----------------------vDe~~~lA~~ 86 (140)
T 2qgv_A 33 QAPDGVVLL-SSDPKRTPEVSDN-PVMIGELLHEFPDYTWQ-VAIAD-----------------------LEQSEAIGDR 86 (140)
T ss_dssp TCSSEEEEE-CCCTTTCTTTTHH-HHHHHHHHTTCTTSCCE-EEECC-----------------------HHHHHHHHHH
T ss_pred CCCCEEEEE-eCCcccCCcHHHH-HhHHHHHHHHcCCCeEE-EEEEE-----------------------CCCCHHHHHH
Confidence 455777755 4998 9999965 69999999888632244 44333 3445678899
Q ss_pred hCCeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 108 LGVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 108 ~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
|||. ..|+.+++.+|+++...++-.+
T Consensus 87 ygV~----------sIPTlilFk~G~~v~~~~G~~~ 112 (140)
T 2qgv_A 87 FGAF----------RFPATLVFTGGNYRGVLNGIHP 112 (140)
T ss_dssp HTCC----------SSSEEEEEETTEEEEEEESCCC
T ss_pred cCCc----------cCCEEEEEECCEEEEEEecCCC
Confidence 9984 2444777799999999887554
No 191
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.55 E-value=1.4e-09 Score=76.07 Aligned_cols=86 Identities=10% Similarity=0.132 Sum_probs=57.6
Q ss_pred ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecC
Q psy5399 21 TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADP 100 (156)
Q Consensus 21 ~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~ 100 (156)
+.++... .+|++++|.|| ++||++|+. ..|.|.++.+.+.. ++. ++.|+.+....
T Consensus 37 ~~~~~~~-~~~k~vlv~F~-a~WC~~C~~-~~p~l~~~~~~~~~-~~~-~~~v~~d~~~~-------------------- 91 (164)
T 1sen_A 37 DGKKEAA-ASGLPLMVIIH-KSWCGACKA-LKPKFAESTEISEL-SHN-FVMVNLEDEEE-------------------- 91 (164)
T ss_dssp HHHHHHH-HHTCCEEEEEE-CTTCHHHHH-HHHHHHTCHHHHHH-HTT-SEEEEEEGGGS--------------------
T ss_pred HHHHHHH-hcCCeEEEEEE-CCCCHHHHH-HHHHHHHHHHHhhc-CCe-EEEEEecCCch--------------------
Confidence 5566666 57899999988 999999996 47999997766543 466 78787753211
Q ss_pred CchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEcc
Q psy5399 101 NLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEP 141 (156)
Q Consensus 101 ~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~ 141 (156)
.++..|++.. ...|+++++| +|+++...++.
T Consensus 92 --~~~~~~~~~~--------~~~Pt~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 92 --PKDEDFSPDG--------GYIPRILFLDPSGKVHPEIINE 123 (164)
T ss_dssp --CSCGGGCTTC--------SCSSEEEEECTTSCBCTTCCCT
T ss_pred --HHHHHhcccC--------CcCCeEEEECCCCCEEEEEeCC
Confidence 0223444421 1244478887 99988776654
No 192
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.53 E-value=1.9e-08 Score=82.26 Aligned_cols=76 Identities=8% Similarity=0.094 Sum_probs=54.0
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHc--CCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAK--GIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~--~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
+++++|.|| ++||++|+. .+|.+.++++++.+. ++. ++.|+.+. |.+..++++|
T Consensus 30 ~k~vlV~Fy-A~WC~pCk~-~~P~l~~la~~~~~~~~~v~-~~~VD~d~---------------------d~~~~l~~~~ 85 (519)
T 3t58_A 30 SSAWAVEFF-ASWCGHAIA-FAPTWKELANDVKDWRPALN-LAVLDCAE---------------------ETNSAVCREF 85 (519)
T ss_dssp SSEEEEEEE-CTTSHHHHH-HHHHHHHHHHHHGGGTTTEE-EEEEETTS---------------------GGGHHHHHHT
T ss_pred CCeEEEEEE-CCCCHHHHH-HHHHHHHHHHHhhCcCCcEE-EEEEECCc---------------------cccHHHHHHc
Confidence 577788777 999999996 589999999999752 455 77776653 3346788888
Q ss_pred CCeeeccCCCcceeeeEEEEEe----CCcEEEEEEc
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVD----DGKITQLNIE 140 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid----~G~I~~~~~~ 140 (156)
||.. .|++++++ +|+++...++
T Consensus 86 ~V~~----------~PTl~~f~~g~~~G~~~~~~~g 111 (519)
T 3t58_A 86 NIAG----------FPTVRFFQAFTKNGSGATLPGA 111 (519)
T ss_dssp TCCS----------BSEEEEECTTCCSCCCEEECCS
T ss_pred CCcc----------cCEEEEEcCcccCCCceeEecC
Confidence 8842 44477776 4555555444
No 193
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.50 E-value=2.4e-08 Score=73.70 Aligned_cols=67 Identities=10% Similarity=0.163 Sum_probs=48.0
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH--cCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA--KGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~--~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
+++++|.|| ++||++|+. ..|.+.++++++++ .++. ++.|+.+. |.+..++++|
T Consensus 30 ~~~vlv~F~-a~wC~~C~~-~~p~~~~l~~~~~~~~~~v~-~~~vd~~~---------------------~~~~~l~~~~ 85 (244)
T 3q6o_A 30 RSAWAVEFF-ASWCGHCIA-FAPTWXALAEDVKAWRPALY-LAALDCAE---------------------ETNSAVCRDF 85 (244)
T ss_dssp SSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHTGGGTTTEE-EEEEETTS---------------------TTTHHHHHHT
T ss_pred CCeEEEEEE-CCcCHHHHH-HHHHHHHHHHHHHhccCcEE-EEEEeCCc---------------------hhhHHHHHHc
Confidence 477788877 999999996 47999999999975 2455 67776532 3346778888
Q ss_pred CCeeeccCCCcceeeeEEEEEeC
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDD 131 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~ 131 (156)
|+.. .|+++++++
T Consensus 86 ~v~~----------~Pt~~~~~~ 98 (244)
T 3q6o_A 86 NIPG----------FPTVRFFXA 98 (244)
T ss_dssp TCCS----------SSEEEEECT
T ss_pred CCCc----------cCEEEEEeC
Confidence 8742 344677764
No 194
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.50 E-value=4.7e-08 Score=74.60 Aligned_cols=70 Identities=14% Similarity=0.140 Sum_probs=51.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|+. ..|.+.++++++.+. +. ++.|..|. +.+..++++||
T Consensus 34 ~~~~vlV~F~-A~wC~~C~~-~~p~~~~la~~~~~~-~~-~~~v~~d~---------------------~~~~~l~~~~~ 88 (298)
T 3ed3_A 34 TNYTSLVEFY-APWCGHCKK-LSSTFRKAAKRLDGV-VQ-VAAVNCDL---------------------NKNKALCAKYD 88 (298)
T ss_dssp SSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTTT-SE-EEEEETTS---------------------TTTHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHH-HHHHHHHHHHHccCC-cE-EEEEEccC---------------------ccCHHHHHhCC
Confidence 3667888887 999999996 589999999998643 66 88888772 12467888888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcE
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKI 134 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I 134 (156)
+.. .|+++++++|++
T Consensus 89 I~~----------~Pt~~~~~~g~~ 103 (298)
T 3ed3_A 89 VNG----------FPTLMVFRPPKI 103 (298)
T ss_dssp CCB----------SSEEEEEECCCC
T ss_pred CCc----------cceEEEEECCce
Confidence 842 344777787764
No 195
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.49 E-value=7.8e-08 Score=65.38 Aligned_cols=77 Identities=14% Similarity=0.075 Sum_probs=55.0
Q ss_pred CeEEEEEeeCCCC--CCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 32 KKVIIFGVPGAFT--PGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 32 k~vvl~f~~~~~c--p~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
++++|.|| ++|| +.|+.. .|.|.++.++|.+ .+. ++-|. .|.+..++.+||
T Consensus 34 ~~vlVdF~-A~wCr~gpCk~i-aPvleela~e~~~-~v~-~~KVd-----------------------vDe~~~la~~yg 86 (137)
T 2qsi_A 34 KIVVLFFR-GDAVRFPEAADL-AVVLPELINAFPG-RLV-AAEVA-----------------------AEAERGLMARFG 86 (137)
T ss_dssp SEEEEEEC-CCTTTCTTHHHH-HHHHHHHHHTSTT-TEE-EEEEC-----------------------GGGHHHHHHHHT
T ss_pred CcEEEEEe-CCccCCCchhhH-HhHHHHHHHHccC-CcE-EEEEE-----------------------CCCCHHHHHHcC
Confidence 36777766 9999 999965 6999999988853 233 33222 345577899999
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCCCc
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDGTG 145 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~~~ 145 (156)
|. ..|+.+++.+|+++...++..+-.
T Consensus 87 V~----------siPTlilFkdG~~v~~~vG~~~k~ 112 (137)
T 2qsi_A 87 VA----------VCPSLAVVQPERTLGVIAKIQDWS 112 (137)
T ss_dssp CC----------SSSEEEEEECCEEEEEEESCCCHH
T ss_pred Cc----------cCCEEEEEECCEEEEEEeCCCCHH
Confidence 94 345577779999999988865533
No 196
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.48 E-value=3.6e-07 Score=66.61 Aligned_cols=71 Identities=13% Similarity=0.235 Sum_probs=51.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcC--CCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHh
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKG--IHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKK 107 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~--~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~ 107 (156)
.+++++|.|| ++||++|+. ..|.+.++++++.+.+ +. ++.|..+ .+..++++
T Consensus 146 ~~~~~~v~f~-a~wC~~C~~-~~p~~~~~a~~~~~~~~~v~-~~~vd~~-----------------------~~~~l~~~ 199 (241)
T 3idv_A 146 DADIILVEFY-APWCGHCKK-LAPEYEKAAKELSKRSPPIP-LAKVDAT-----------------------AETDLAKR 199 (241)
T ss_dssp HCSEEEEEEE-CTTCTGGGG-THHHHHHHHHHHHTSSSCCC-EEEEETT-----------------------TCHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHH-hHHHHHHHHHHHhccCCcEE-EEEEECC-----------------------CCHHHHHH
Confidence 4667777777 999999996 4799999999998644 55 6655544 23458889
Q ss_pred hCCeeeccCCCcceeeeEEEEEeCCcEEE
Q psy5399 108 LGVEHEIPVLGGWRSKRYSMVVDDGKITQ 136 (156)
Q Consensus 108 ~gv~~~~~~~~~~~~~~~~~iid~G~I~~ 136 (156)
||+.. .|+.+++++|+++.
T Consensus 200 ~~v~~----------~Pt~~~~~~g~~~~ 218 (241)
T 3idv_A 200 FDVSG----------YPTLKIFRKGRPYD 218 (241)
T ss_dssp TTCCS----------SSEEEEEETTEEEE
T ss_pred cCCcc----------cCEEEEEECCeEEE
Confidence 99842 34477778888765
No 197
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.46 E-value=5.4e-08 Score=68.79 Aligned_cols=87 Identities=9% Similarity=0.020 Sum_probs=50.0
Q ss_pred ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChh-hH--HHhHHHHHHcCCCEEEEEecCC-HHHHHHHHHHcCCCcceEE
Q psy5399 21 TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLP-GY--LAKEKDLKAKGIHEIFCIAVND-AFVMEAWCRKNNAEGKIRF 96 (156)
Q Consensus 21 ~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~-~l--~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~~~~~~~f~~ 96 (156)
+.+..+. .+||+|+|.|| ++||++|+..+ + .+ .+..+.+.+ ++. ++-|..+. ++..+.|..
T Consensus 30 ea~~~A~-~~~KpVlvdF~-A~WC~~Ck~m~-~~~f~~~~va~~l~~-~fv-~ikVD~de~~~l~~~y~~---------- 94 (173)
T 3ira_A 30 EAFEKAR-KENKPVFLSIG-YSTCHWCHMMA-HESFEDEEVAGLMNE-AFV-SIKVDREERPDIDNIYMT---------- 94 (173)
T ss_dssp HHHHHHH-HHTCCEEEEEE-CTTCHHHHHHH-HHTTTCHHHHHHHHH-HCE-EEEEETTTCHHHHHHHHH----------
T ss_pred HHHHHHH-HhCCCEEEecc-cchhHhhcccc-ccccCCHHHHHHHHh-cCc-eeeeCCcccCcHHHHHHH----------
Confidence 3455555 57899999998 99999999532 4 12 234444433 344 55555543 332223221
Q ss_pred EecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEE
Q psy5399 97 LADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLN 138 (156)
Q Consensus 97 ~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~ 138 (156)
.+...+|+. + .|++++++ +|++++..
T Consensus 95 ------~~q~~~gv~-------g---~Pt~v~l~~dG~~v~~~ 121 (173)
T 3ira_A 95 ------VCQIILGRG-------G---WPLNIIMTPGKKPFFAG 121 (173)
T ss_dssp ------HHHHHHSCC-------C---SSEEEEECTTSCEEEEE
T ss_pred ------HHHHHcCCC-------C---CcceeeECCCCCceeee
Confidence 111224662 2 44488888 99999974
No 198
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.42 E-value=3.2e-07 Score=67.91 Aligned_cols=44 Identities=14% Similarity=-0.016 Sum_probs=31.4
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH---cCCCEEEEEec
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA---KGIHEIFCIAV 75 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~---~~~~~v~~is~ 75 (156)
.+++.+++.|| ++|||+|+. ..|.+.+++.++.. .++. +..|..
T Consensus 136 ~~~~~~vv~F~-a~wC~~C~~-~~p~l~~la~~~~~~~~~~v~-~~~vd~ 182 (243)
T 2hls_A 136 LKGRVHIETII-TPSCPYCPY-AVLLAHMFAYEAWKQGNPVIL-SEAVEA 182 (243)
T ss_dssp CCSCEEEEEEE-CSSCSSHHH-HHHHHHHHHHHHHHTTCCCEE-EEEEET
T ss_pred cCCCcEEEEEE-CCCCCCcHH-HHHHHHHHHHHcccccCCcEE-EEEEEC
Confidence 35665566666 999999996 58999999999853 3454 555543
No 199
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.39 E-value=1.7e-07 Score=62.16 Aligned_cols=83 Identities=14% Similarity=0.025 Sum_probs=57.3
Q ss_pred CeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 32 KKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 32 k~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
++++|.|| ++||+.|+.. .|.|.+++++|. ++. ++-|..+. . +.+|++.
T Consensus 24 ~~vvv~F~-a~wc~~C~~~-~p~l~~la~~~~--~v~-f~kvd~d~----------~----------------~~~~~v~ 72 (118)
T 3evi_A 24 VWVIIHLY-RSSIPMCLLV-NQHLSLLARKFP--ETK-FVKAIVNS----------C----------------IQHYHDN 72 (118)
T ss_dssp CEEEEEEE-CTTSHHHHHH-HHHHHHHHHHCT--TSE-EEEEEGGG----------T----------------STTCCGG
T ss_pred CeEEEEEe-CCCChHHHHH-HHHHHHHHHHCC--CCE-EEEEEhHH----------h----------------HHHCCCC
Confidence 37888887 9999999975 699999998885 466 77666652 0 2556663
Q ss_pred eeccCCCcceeeeEEEEEeCCcEEEEEEccCCC---ceeecchhhhh
Q psy5399 112 HEIPVLGGWRSKRYSMVVDDGKITQLNIEPDGT---GLTCSLVDELK 155 (156)
Q Consensus 112 ~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~~---~~~~~~~~~~l 155 (156)
..|+.+++.+|+++...++.... ..+.++++.+|
T Consensus 73 ----------~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L 109 (118)
T 3evi_A 73 ----------CLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKL 109 (118)
T ss_dssp ----------GCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHH
T ss_pred ----------CCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHH
Confidence 24447777899999998876432 23444444443
No 200
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.38 E-value=5.9e-08 Score=70.91 Aligned_cols=72 Identities=8% Similarity=0.038 Sum_probs=51.3
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCC
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGV 110 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv 110 (156)
|+++||.|| ++||++|... .|.|.+++++|. ++. ++.|..+ . ..++..|++
T Consensus 120 ~k~vvV~F~-a~wC~~C~~l-~p~l~~la~~~~--~v~-f~~vd~~--~----------------------~~l~~~~~i 170 (217)
T 2trc_P 120 VTTIVVNIY-EDGVRGCDAL-NSSLECLAAEYP--MVK-FCKIRAS--N----------------------TGAGDRFSS 170 (217)
T ss_dssp TCEEEEEEE-CTTSTTHHHH-HHHHHHHHTTCT--TSE-EEEEEHH--H----------------------HTCSTTSCG
T ss_pred CcEEEEEEE-CCCCccHHHH-HHHHHHHHHHCC--CeE-EEEEECC--c----------------------HHHHHHCCC
Confidence 478888887 9999999964 799999988874 566 7666653 1 124456676
Q ss_pred eeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 111 EHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 111 ~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
. ..|+++++.+|+++...++.
T Consensus 171 ~----------~~PTl~~~~~G~~v~~~~G~ 191 (217)
T 2trc_P 171 D----------VLPTLLVYKGGELISNFISV 191 (217)
T ss_dssp G----------GCSEEEEEETTEEEEEETTG
T ss_pred C----------CCCEEEEEECCEEEEEEeCC
Confidence 3 24447777899998877653
No 201
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.36 E-value=1.6e-07 Score=61.34 Aligned_cols=56 Identities=13% Similarity=0.038 Sum_probs=39.5
Q ss_pred CCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHc----CCCEEEEEecC
Q psy5399 18 TPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAK----GIHEIFCIAVN 76 (156)
Q Consensus 18 ~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~----~~~~v~~is~d 76 (156)
.++..+...-..++++++|.|| ++||++|+. ..|.+.++++++.+. ++. ++.|..+
T Consensus 12 l~~~~f~~~v~~~~~~vlv~f~-a~wC~~C~~-~~p~~~~~~~~~~~~~~~~~v~-~~~vd~~ 71 (121)
T 2djj_A 12 VVAKNYNEIVLDDTKDVLIEFY-APWCGHCKA-LAPKYEELGALYAKSEFKDRVV-IAKVDAT 71 (121)
T ss_dssp CCTTTTTTSSSCTTSCEEEEEE-CSSCTTHHH-HHHHHHHHHHHHTTSSCTTSSE-EEEEETT
T ss_pred ecccCHHHHhhcCCCCEEEEEE-CCCCHhHHH-hhHHHHHHHHHHhhcccCCceE-EEEEECc
Confidence 4555554331135788888887 999999996 479999999999752 455 6666654
No 202
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.36 E-value=8.1e-08 Score=62.99 Aligned_cols=68 Identities=7% Similarity=0.068 Sum_probs=49.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|.. ..|.+.++++++.+ ++. ++.|..+. +..++++|+
T Consensus 20 ~~~~~lv~f~-a~~C~~C~~-~~~~~~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~ 72 (122)
T 3aps_A 20 GKTHWVVDFY-APWCGPCQN-FAPEFELLARMIKG-KVR-AGKVDCQA-----------------------YPQTCQKAG 72 (122)
T ss_dssp CSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTT-TCE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHH-HHHHHHHHHHHhcC-CeE-EEEEeCcC-----------------------CHHHHHHcC
Confidence 4677888877 999999996 47999999998864 466 77776652 235778888
Q ss_pred CeeeccCCCcceeeeEEEEEe-CCcE
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVD-DGKI 134 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid-~G~I 134 (156)
+. ..|++++++ +|++
T Consensus 73 v~----------~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 73 IK----------AYPSVKLYQYERAK 88 (122)
T ss_dssp CC----------SSSEEEEEEEEGGG
T ss_pred CC----------ccceEEEEeCCCcc
Confidence 84 244477776 6653
No 203
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.36 E-value=6.4e-07 Score=58.72 Aligned_cols=77 Identities=12% Similarity=0.073 Sum_probs=53.4
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCC
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGV 110 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv 110 (156)
+++++|+|+ ++||+.|.. ..|.|.++.++ .++. ++-|..+.-.. -...++.+|||
T Consensus 24 ~~~vvi~kh-atwCgpc~~-~~~~~e~~~~~---~~v~-~~~vdVde~r~-------------------~Sn~IA~~~~V 78 (112)
T 3iv4_A 24 NKYVFVLKH-SETCPISAN-AYDQFNKFLYE---RDMD-GYYLIVQQERD-------------------LSDYIAKKTNV 78 (112)
T ss_dssp CSEEEEEEE-CTTCHHHHH-HHHHHHHHHHH---HTCC-EEEEEGGGGHH-------------------HHHHHHHHHTC
T ss_pred CCCEEEEEE-CCcCHhHHH-HHHHHHHHhcc---CCce-EEEEEeecCch-------------------hhHHHHHHhCC
Confidence 567777776 999999995 57999998874 3566 66665541110 11358899999
Q ss_pred eeeccCCCcceeeeEEEEEeCCcEEEEEEcc
Q psy5399 111 EHEIPVLGGWRSKRYSMVVDDGKITQLNIEP 141 (156)
Q Consensus 111 ~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~ 141 (156)
.. ..|+.+++.+|++++.....
T Consensus 79 ~h---------~sPq~il~k~G~~v~~~SH~ 100 (112)
T 3iv4_A 79 KH---------ESPQAFYFVNGEMVWNRDHG 100 (112)
T ss_dssp CC---------CSSEEEEEETTEEEEEEEGG
T ss_pred cc---------CCCeEEEEECCEEEEEeecc
Confidence 52 24447888999999997654
No 204
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.35 E-value=4.9e-08 Score=67.50 Aligned_cols=76 Identities=7% Similarity=-0.056 Sum_probs=47.3
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhH--HHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHH
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKE--KDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTK 106 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~--~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~ 106 (156)
..||+|+|.|| ++||++|+.. .|.+.+.. .++.+ .. ++.|..|+. + ...+.
T Consensus 42 ~~~KpVlV~F~-A~WC~~Ck~m-~p~~~~~~~~~~~~~--~~-fv~V~vD~e------------~----------~~~~~ 94 (151)
T 3ph9_A 42 KSKKPLMVIHH-LEDCQYSQAL-KKVFAQNEEIQEMAQ--NK-FIMLNLMHE------------T----------TDKNL 94 (151)
T ss_dssp HHTCCEEEEEC-CTTCHHHHHH-HHHHHHCHHHHHHHH--HT-CEEEEESSC------------C----------SCGGG
T ss_pred HcCCcEEEEEE-CCCCHhHHHH-HHHHhcCHHHHHHhh--cC-eEEEEecCC------------c----------hhhHh
Confidence 35889999988 9999999964 47776542 22222 23 566666520 0 11234
Q ss_pred hhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEcc
Q psy5399 107 KLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEP 141 (156)
Q Consensus 107 ~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~ 141 (156)
+|++. ..|++++++ +|+++...++.
T Consensus 95 ~~~v~----------~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 95 SPDGQ----------YVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp CTTCC----------CSSEEEEECTTSCBCTTCCCS
T ss_pred hcCCC----------CCCEEEEECCCCCEEEEEeCC
Confidence 55552 234488888 99998876654
No 205
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.33 E-value=1.3e-07 Score=64.58 Aligned_cols=75 Identities=12% Similarity=0.077 Sum_probs=42.2
Q ss_pred CeEEEEEeeCCC--CCCCCcCChhhHHHhHHHHHHcCCC-EEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhh
Q psy5399 32 KKVIIFGVPGAF--TPGCSVTHLPGYLAKEKDLKAKGIH-EIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKL 108 (156)
Q Consensus 32 k~vvl~f~~~~~--cp~C~~~~l~~l~~~~~~~~~~~~~-~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~ 108 (156)
+.++|+|+ +.| |+.|+.. .|.|.+++++| + ++. .++.|+.| .+..++++|
T Consensus 35 ~~~vv~f~-~~~~~C~~C~~l-~P~l~~la~~~-~-~v~~~~~~Vd~d-----------------------~~~~la~~~ 87 (142)
T 2es7_A 35 GDGVILLS-SDPRRTPEVSDN-PVMIAELLREF-P-QFDWQVAVADLE-----------------------QSEAIGDRF 87 (142)
T ss_dssp CSEEEEEC-CCSCC----CCH-HHHHHHHHHTC-T-TSCCEEEEECHH-----------------------HHHHHHHTT
T ss_pred CCEEEEEE-CCCCCCccHHHH-HHHHHHHHHHh-c-ccceeEEEEECC-----------------------CCHHHHHhc
Confidence 34666665 666 9999964 79999999887 3 232 03444433 124578889
Q ss_pred CCeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 109 GVEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 109 gv~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
||. ..|+++++.+|+++....+...
T Consensus 88 ~V~----------~iPT~~~fk~G~~v~~~~G~~~ 112 (142)
T 2es7_A 88 NVR----------RFPATLVFTDGKLRGALSGIHP 112 (142)
T ss_dssp TCC----------SSSEEEEESCC----CEESCCC
T ss_pred CCC----------cCCeEEEEeCCEEEEEEeCCCC
Confidence 884 2444788899999887776433
No 206
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.32 E-value=5e-07 Score=70.91 Aligned_cols=72 Identities=4% Similarity=0.073 Sum_probs=50.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH-----cCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchh
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA-----KGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEF 104 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~-----~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~ 104 (156)
++++++|.|| ++||++|+. ..|.+.++++++++ .++. ++.|..+ .+..+
T Consensus 21 ~~~~vlV~F~-a~wC~~C~~-~~p~~~~~a~~~~~~~~~~~~v~-~~~Vd~~-----------------------~~~~l 74 (382)
T 2r2j_A 21 NADVALVNFY-ADWCRFSQM-LHPIFEEASDVIKEEFPNENQVV-FARVDCD-----------------------QHSDI 74 (382)
T ss_dssp HCSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTTCC---CCEE-EEEEETT-----------------------TCHHH
T ss_pred cCCeEEEEEE-CCCCHHHHH-HHHHHHHHHHHHHhhcCCCCceE-EEEEECC-----------------------ccHHH
Confidence 4677888877 999999996 47999999999853 2244 5555433 35678
Q ss_pred HHhhCCeeeccCCCcceeeeEEEEEeCCcEEEE
Q psy5399 105 TKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQL 137 (156)
Q Consensus 105 ~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~ 137 (156)
+++||+.. .|+++++.+|+++..
T Consensus 75 ~~~~~v~~----------~Pt~~~f~~G~~~~~ 97 (382)
T 2r2j_A 75 AQRYRISK----------YPTLKLFRNGMMMKR 97 (382)
T ss_dssp HHHTTCCE----------ESEEEEEETTEEEEE
T ss_pred HHhcCCCc----------CCEEEEEeCCcEeee
Confidence 88888842 444666678888764
No 207
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.29 E-value=1.1e-08 Score=66.57 Aligned_cols=39 Identities=10% Similarity=-0.026 Sum_probs=30.5
Q ss_pred ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHH
Q psy5399 21 TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDL 62 (156)
Q Consensus 21 ~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~ 62 (156)
..++|++ ..++.+||.|| ++|||+|+.. .|.|.++++++
T Consensus 3 ~~~~la~-~~~k~~vV~F~-A~WC~~C~~~-~p~~~~~a~~~ 41 (106)
T 3kp8_A 3 LAVGLAA-HLRQIGGTMYG-AYWCPHCQDQ-KELFGAAFDQV 41 (106)
T ss_dssp HHHHHHH-HHHHHTCEEEE-CTTCHHHHHH-HHHHGGGGGGS
T ss_pred HhhHHHH-hcCCCEEEEEE-CCCCHHHHHH-HHHHHHHHHhC
Confidence 4567788 57888888887 9999999964 78888887544
No 208
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.27 E-value=1.5e-06 Score=67.31 Aligned_cols=68 Identities=15% Similarity=0.160 Sum_probs=46.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhh-------HHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCc
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPG-------YLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNL 102 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~-------l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~ 102 (156)
++++++|.|| ++||+ |.. .+|. +.++++.+++.++. ++.|..+ .+.
T Consensus 27 ~~~~~lV~F~-a~wC~-c~~-~~p~~~~~~~~~~~~a~~~~~~~v~-~~~Vd~~-----------------------~~~ 79 (350)
T 1sji_A 27 KYDVLCLYYH-ESVSS-DKV-AQKQFQLKEIVLELVAQVLEHKDIG-FVMVDAK-----------------------KEA 79 (350)
T ss_dssp TCSEEEEEEE-CCSCS-SST-TSHHHHHHHHHHHHHHHHGGGSSEE-EEEEETT-----------------------TTH
T ss_pred hCCeEEEEEE-CCCCc-chh-hCchhhhhhHHHHHHHHHHhhcCcE-EEEEeCC-----------------------CCH
Confidence 4567777777 99999 974 5799 67777777654555 5555543 345
Q ss_pred hhHHhhCCeeeccCCCcceeeeEEEEEeCCcE
Q psy5399 103 EFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKI 134 (156)
Q Consensus 103 ~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I 134 (156)
.++++||+. + .|+++++.+|++
T Consensus 80 ~l~~~~~v~------~----~Pt~~~~~~g~~ 101 (350)
T 1sji_A 80 KLAKKLGFD------E----EGSLYVLKGDRT 101 (350)
T ss_dssp HHHHHHTCC------S----TTEEEEEETTEE
T ss_pred HHHHhcCCC------c----cceEEEEECCcE
Confidence 688888884 2 333677788873
No 209
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.24 E-value=2.8e-07 Score=74.62 Aligned_cols=69 Identities=13% Similarity=0.174 Sum_probs=49.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|+. ..|.+.++++++...++. ++.|..+ .+..++++||
T Consensus 30 ~~~~~lv~F~-a~wC~~C~~-~~p~~~~~a~~~~~~~v~-~~~vd~~-----------------------~~~~l~~~~~ 83 (504)
T 2b5e_A 30 SHDLVLAEFF-APWCGHCKN-MAPEYVKAAETLVEKNIT-LAQIDCT-----------------------ENQDLCMEHN 83 (504)
T ss_dssp TCSEEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTTTTCE-EEEEETT-----------------------TCHHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHH-hHHHHHHHHHHhccCCeE-EEEEECC-----------------------CCHHHHHhcC
Confidence 4667777777 999999996 479999999998765566 7777643 3356788888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcE
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKI 134 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I 134 (156)
+.. .|+++++++|++
T Consensus 84 v~~----------~Pt~~~~~~g~~ 98 (504)
T 2b5e_A 84 IPG----------FPSLKIFKNSDV 98 (504)
T ss_dssp CCS----------SSEEEEEETTCT
T ss_pred CCc----------CCEEEEEeCCcc
Confidence 842 333677777775
No 210
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.21 E-value=2.7e-06 Score=51.03 Aligned_cols=27 Identities=19% Similarity=0.081 Sum_probs=21.4
Q ss_pred EEEEeeCCCCCCCCcCChhhHHHhHHHHH
Q psy5399 35 IIFGVPGAFTPGCSVTHLPGYLAKEKDLK 63 (156)
Q Consensus 35 vl~f~~~~~cp~C~~~~l~~l~~~~~~~~ 63 (156)
.|.|| ++||++|+. ..|.+.++.+++.
T Consensus 3 ~v~f~-a~wC~~C~~-~~~~l~~~~~~~~ 29 (77)
T 1ilo_A 3 KIQIY-GTGCANCQM-LEKNAREAVKELG 29 (77)
T ss_dssp EEEEE-CSSSSTTHH-HHHHHHHHHHHTT
T ss_pred EEEEE-cCCChhHHH-HHHHHHHHHHHcC
Confidence 46676 789999996 4798988887764
No 211
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.18 E-value=9.8e-07 Score=58.35 Aligned_cols=69 Identities=9% Similarity=-0.052 Sum_probs=47.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHc----CCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhH
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAK----GIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFT 105 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~----~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~ 105 (156)
.+++++|.|| ++||++|+. ..|.+.++++++... .+. ++.|.. |.+..++
T Consensus 32 ~~~~vlv~F~-a~wC~~C~~-~~p~~~~la~~~~~~~~~~~v~-~~~vd~-----------------------~~~~~l~ 85 (127)
T 3h79_A 32 PEKDVFVLYY-VPWSRHSVA-AMRLWDDLSMSQSQKRNHLTFV-AARIDG-----------------------EKYPDVI 85 (127)
T ss_dssp TTCEEEEEEE-CTTCHHHHH-HHHHHHHHHHHHHTSTTTTTEE-EEEEET-----------------------TTCHHHH
T ss_pred CCCCEEEEEE-CCccHHHHH-HhHHHHHHHHHHHhcccCCCeE-EEEEEc-----------------------cccHhHH
Confidence 3677888877 999999996 479999999988632 222 333433 3345788
Q ss_pred HhhCCeeeccCCCcceeeeEEEEEe-CCcE
Q psy5399 106 KKLGVEHEIPVLGGWRSKRYSMVVD-DGKI 134 (156)
Q Consensus 106 ~~~gv~~~~~~~~~~~~~~~~~iid-~G~I 134 (156)
++|++.. .|++++++ ++++
T Consensus 86 ~~~~v~~----------~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 86 ERMRVSG----------FPTMRYYTRIDKQ 105 (127)
T ss_dssp HHTTCCS----------SSEEEEECSSCSS
T ss_pred HhcCCcc----------CCEEEEEeCCCCC
Confidence 8898842 44477777 4443
No 212
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.16 E-value=1.2e-06 Score=70.47 Aligned_cols=72 Identities=15% Similarity=0.115 Sum_probs=51.9
Q ss_pred CeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 32 KKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 32 k~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
++++|.|| ++||++|+. ..|.+.++++++.+. +. ++.|..+ .+..++++||+.
T Consensus 22 ~~~lv~F~-a~wC~~C~~-~~p~~~~~a~~~~~~-v~-~~~vd~~-----------------------~~~~l~~~~~v~ 74 (481)
T 3f8u_A 22 GLMLVEFF-APWCGHAKR-LAPEYEAAATRLKGI-VP-LAKVDCT-----------------------ANTNTCNKYGVS 74 (481)
T ss_dssp SEEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTTT-CC-EEEEETT-----------------------TCHHHHHHTTCC
T ss_pred CeEEEEEE-CCCCHHHHH-hHHHHHHHHHHhcCc-eE-EEEEECC-----------------------CCHHHHHhcCCC
Confidence 66777776 999999996 479999999998754 66 7766654 245678888884
Q ss_pred eeccCCCcceeeeEEEEEeCCcEEEEEEc
Q psy5399 112 HEIPVLGGWRSKRYSMVVDDGKITQLNIE 140 (156)
Q Consensus 112 ~~~~~~~~~~~~~~~~iid~G~I~~~~~~ 140 (156)
. .|+.+++.+|+++..+.+
T Consensus 75 ~----------~Ptl~~~~~g~~~~~~~G 93 (481)
T 3f8u_A 75 G----------YPTLKIFRDGEEAGAYDG 93 (481)
T ss_dssp E----------ESEEEEEETTEEEEECCS
T ss_pred C----------CCEEEEEeCCceeeeecC
Confidence 2 444666678876655443
No 213
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.14 E-value=1.9e-07 Score=65.22 Aligned_cols=42 Identities=7% Similarity=0.013 Sum_probs=31.2
Q ss_pred CCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHH
Q psy5399 19 PQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLK 63 (156)
Q Consensus 19 ~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~ 63 (156)
++....+++ -.++.+|+.|| ..|||+|... .|.+.++.+++.
T Consensus 11 ~~~~~~~G~-~~a~v~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~ 52 (175)
T 3gyk_A 11 DPNAPVLGN-PEGDVTVVEFF-DYNCPYCRRA-MAEVQGLVDADP 52 (175)
T ss_dssp CTTSCEEEC-TTCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT
T ss_pred CCCCCCcCC-CCCCEEEEEEE-CCCCccHHHH-HHHHHHHHHhCC
Confidence 455566777 46776666665 9999999964 699998888764
No 214
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.03 E-value=1.8e-06 Score=73.33 Aligned_cols=68 Identities=9% Similarity=0.113 Sum_probs=50.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.|++++|.|| ++||+.|.. .+|.|.++++++++ .+. ++.|+.+. +..+++.||
T Consensus 454 ~~~~vlv~F~-a~wC~~c~~-~~p~~~~~a~~~~~-~v~-~~~vd~~~-----------------------~~~~~~~~~ 506 (780)
T 3apo_A 454 DKEPWLVDFF-APWSPPSRA-LLPELRKASTLLYG-QLK-VGTLDCTI-----------------------HEGLCNMYN 506 (780)
T ss_dssp CCSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTT-TCE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHH-HhHHHHHHHHHhcC-CeE-EEEEeCCC-----------------------CHHHHHHcC
Confidence 6888988888 999999995 58999999999864 466 77776552 223777888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcE
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKI 134 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I 134 (156)
+. + .|+++++++|++
T Consensus 507 v~------~----~Pt~~~~~~g~~ 521 (780)
T 3apo_A 507 IQ------A----YPTTVVFNQSSI 521 (780)
T ss_dssp CC------S----SSEEEEEETTEE
T ss_pred CC------c----CCeEEEEcCCce
Confidence 84 2 344777788876
No 215
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.99 E-value=7.6e-07 Score=58.82 Aligned_cols=79 Identities=5% Similarity=-0.109 Sum_probs=42.9
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHH-HHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDL-KAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~-~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+.++|.|| +.||++|+..+ +.+...++.. ....+. ++-|..+.. ....++.+|+
T Consensus 18 ~~~~LV~F~-A~wC~~Ck~~~-~~i~~~~~~~a~~~~~~-l~~vdv~~~---------------------~~~~la~~~~ 73 (116)
T 3dml_A 18 AELRLLMFE-QPGCLYCARWD-AEIAPQYPLTDEGRAAP-VQRLQMRDP---------------------LPPGLELARP 73 (116)
T ss_dssp -CEEEEEEE-CTTCHHHHHHH-HHTTTTGGGSHHHHHSC-EEEEETTSC---------------------CCTTCBCSSC
T ss_pred CCCEEEEEE-CCCCHHHHHHH-HHHHhhHHHhhhcccce-EEEEECCCC---------------------CchhHHHHCC
Confidence 346777776 99999999422 3222222111 011233 444444311 1234666777
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEEccCC
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNIEPDG 143 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~~~~~ 143 (156)
+. .+|+.+++++|+.+....+-.+
T Consensus 74 V~----------g~PT~i~f~~G~ev~Ri~G~~~ 97 (116)
T 3dml_A 74 VT----------FTPTFVLMAGDVESGRLEGYPG 97 (116)
T ss_dssp CC----------SSSEEEEEETTEEEEEEECCCC
T ss_pred CC----------CCCEEEEEECCEEEeeecCCCC
Confidence 63 2444777799999988766443
No 216
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.97 E-value=7.9e-07 Score=71.49 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=28.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHc
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAK 65 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~ 65 (156)
.+++++|.|| ++||++|+. .+|.+.++++++.+.
T Consensus 369 ~~k~vlv~f~-a~wC~~C~~-~~p~~~~l~~~~~~~ 402 (481)
T 3f8u_A 369 ENKDVLIEFY-APWCGHCKN-LEPKYKELGEKLSKD 402 (481)
T ss_dssp TTCEEEEEEE-CTTBHHHHH-HHHHHHHHHHHTTTC
T ss_pred CCCcEEEEEe-cCcChhHHH-hhHHHHHHHHHhccC
Confidence 3788888887 999999996 589999999998754
No 217
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.95 E-value=3.4e-06 Score=61.21 Aligned_cols=41 Identities=12% Similarity=-0.134 Sum_probs=28.8
Q ss_pred CCeE-EEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 31 GKKV-IIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 31 gk~v-vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
++++ ++.|| ++||++|+. ..|.+.+++.++. ++. ++.|..+
T Consensus 135 ~~~~~~v~F~-a~wC~~C~~-~~~~~~~~~~~~~--~v~-~~~vd~~ 176 (229)
T 2ywm_A 135 DIPIEIWVFV-TTSCGYCPS-AAVMAWDFALAND--YIT-SKVIDAS 176 (229)
T ss_dssp CSCEEEEEEE-CTTCTTHHH-HHHHHHHHHHHCT--TEE-EEEEEGG
T ss_pred CCCeEEEEEE-CCCCcchHH-HHHHHHHHHHHCC--CeE-EEEEECC
Confidence 3456 55565 999999995 4799999888872 455 6666543
No 218
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.94 E-value=1.4e-06 Score=74.11 Aligned_cols=73 Identities=5% Similarity=-0.006 Sum_probs=51.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCchhHHhhC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLG 109 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~g 109 (156)
.+++++|.|| ++||++|+. .+|.+.+++++++. ++. ++.|..+ ....++++||
T Consensus 674 ~~~~v~v~F~-a~wC~~C~~-~~p~~~~la~~~~~-~~~-~~~vd~~-----------------------~~~~~~~~~~ 726 (780)
T 3apo_A 674 GKTHWVVDFY-APWSGPSQN-FAPEFELLARMIKG-KVR-AGKVDCQ-----------------------AYPQTCQKAG 726 (780)
T ss_dssp CSSCEEEEEE-CTTCHHHHH-HHHHHHHHHHHHTT-TCE-EEEEETT-----------------------TCHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHH-HHHHHHHHHHHhcC-Cce-EEEEECC-----------------------CCHHHHHhcC
Confidence 4677888887 999999996 58999999999864 465 6666653 2345778888
Q ss_pred CeeeccCCCcceeeeEEEEEeCCcEEEEEE
Q psy5399 110 VEHEIPVLGGWRSKRYSMVVDDGKITQLNI 139 (156)
Q Consensus 110 v~~~~~~~~~~~~~~~~~iid~G~I~~~~~ 139 (156)
+. + .|+++++.+|+++....
T Consensus 727 v~------~----~Pt~~~~~~g~~~~~~~ 746 (780)
T 3apo_A 727 IK------A----YPSVKLYQYERAKKSIW 746 (780)
T ss_dssp CC------S----SSEEEEEEEETTTTEEE
T ss_pred CC------c----CCEEEEEcCCCcccccc
Confidence 84 2 34467777776654433
No 219
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.92 E-value=6.4e-06 Score=58.34 Aligned_cols=41 Identities=22% Similarity=0.145 Sum_probs=28.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEe
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is 74 (156)
.++.+|+.|| ..|||+|... .+.+.++.+++.. .+. +..+.
T Consensus 21 ~~~~~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v~-~~~~p 61 (195)
T 2znm_A 21 SGKIEVLEFF-GYFCVHCHHF-DPLLLKLGKALPS-DAY-LRTEH 61 (195)
T ss_dssp SSSEEEEEEE-CTTSCCTTSS-CHHHHHHHHHSCT-TEE-EEEEE
T ss_pred CCCcEEEEEE-CCCChhHHHH-hHHHHHHHHHCCC-ceE-EEEec
Confidence 3555666655 9999999965 5999988887743 344 54444
No 220
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.92 E-value=1.8e-06 Score=62.66 Aligned_cols=38 Identities=18% Similarity=0.104 Sum_probs=27.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEe
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is 74 (156)
+++++|+.|| ..|||+|+.. .+.+.++.+ .++. ++.+.
T Consensus 85 ~~k~~vv~F~-d~~Cp~C~~~-~~~l~~l~~----~~v~-v~~~~ 122 (216)
T 1eej_A 85 QEKHVITVFT-DITCGYCHKL-HEQMADYNA----LGIT-VRYLA 122 (216)
T ss_dssp TCCEEEEEEE-CTTCHHHHHH-HTTHHHHHH----TTEE-EEEEE
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHh----CCcE-EEEEE
Confidence 4666777776 9999999964 688877653 3666 66553
No 221
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.92 E-value=5e-07 Score=64.25 Aligned_cols=42 Identities=14% Similarity=0.126 Sum_probs=29.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV 75 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~ 75 (156)
.++++|+.|| ..|||+|... .+.+.++.+++.+ ++. +.-+..
T Consensus 24 ~~~~~vv~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v~-~~~~~~ 65 (195)
T 3hd5_A 24 PGKIEVLEFF-AYTCPHCAAI-EPMVEDWAKTAPQ-DVV-LKQVPI 65 (195)
T ss_dssp TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHTCCT-TEE-EEEEEC
T ss_pred CCCeEEEEEE-CCCCccHHHh-hHHHHHHHHHCCC-CeE-EEEEec
Confidence 3566666666 9999999965 5888888877754 354 555544
No 222
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.90 E-value=3e-06 Score=68.43 Aligned_cols=43 Identities=12% Similarity=0.026 Sum_probs=33.0
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHc-C------CCEEEEEecC
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAK-G------IHEIFCIAVN 76 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~-~------~~~v~~is~d 76 (156)
+++++|.|| ++||++|+. ..|.+.++++++.+. + +. ++.|..+
T Consensus 42 ~k~VlV~Fy-A~WC~pCk~-~~P~l~~la~~~~~~~g~~~~~~v~-f~~VD~d 91 (470)
T 3qcp_A 42 LCPWIVLFY-NDGCGACRR-YASTFSKFAGGLKVEHGKDALQIAT-AAAVNCA 91 (470)
T ss_dssp GSCEEEEEE-CTTCHHHHH-HHHHHHHHHHTSCCSSCSSGGGGCE-EEEEETT
T ss_pred CCeEEEEEE-CCCCHHHHH-HHHHHHHHHHHHhhhcccccCceEE-EEEEECC
Confidence 367888887 999999996 579999999988633 2 55 6666654
No 223
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.69 E-value=7.8e-06 Score=63.28 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=28.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHc
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAK 65 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~ 65 (156)
.+++++|.|| ++||++|+. ..|.+.++++++++.
T Consensus 266 ~~k~~lv~f~-a~wC~~C~~-~~p~~~~la~~~~~~ 299 (361)
T 3uem_A 266 EKKNVFVEFY-APWCGHCKQ-LAPIWDKLGETYKDH 299 (361)
T ss_dssp TTCEEEEEEE-CTTCHHHHH-HHHHHHHHHHHTTTC
T ss_pred CCCcEEEEEe-cCcCHhHHH-HHHHHHHHHHHhccC
Confidence 5677888877 999999996 479999999998754
No 224
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.64 E-value=5e-06 Score=58.87 Aligned_cols=33 Identities=21% Similarity=0.146 Sum_probs=24.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA 64 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~ 64 (156)
.++++|+.|| ..|||+|... .|.+.++.+++.+
T Consensus 24 ~~~~~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~ 56 (192)
T 3h93_A 24 PGKIEVVELF-WYGCPHCYAF-EPTIVPWSEKLPA 56 (192)
T ss_dssp TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHTCCT
T ss_pred CCCCEEEEEE-CCCChhHHHh-hHHHHHHHHhCCC
Confidence 3565666665 9999999965 5888888777654
No 225
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.63 E-value=4.5e-05 Score=53.94 Aligned_cols=30 Identities=13% Similarity=-0.008 Sum_probs=24.4
Q ss_pred CeEEEEEeeC-------CCCCCCCcCChhhHHHhHHHHH
Q psy5399 32 KKVIIFGVPG-------AFTPGCSVTHLPGYLAKEKDLK 63 (156)
Q Consensus 32 k~vvl~f~~~-------~~cp~C~~~~l~~l~~~~~~~~ 63 (156)
.++||.|| + .||++|+.. .|.|.+++++|.
T Consensus 38 ~~vvV~F~-A~~~~~~~~wCgpCk~l-~P~~e~lA~~~~ 74 (178)
T 3ga4_A 38 YFNILYIT-MRGTNSNGMSCQLCHDF-EKTYHAVADVIR 74 (178)
T ss_dssp CEEEEEEE-CCSBCTTSCBCHHHHHH-HHHHHHHHHHHH
T ss_pred CcEEEEEe-CCCCCCCCCCChhHHHH-HHHHHHHHHHhh
Confidence 35777776 5 599999965 699999999996
No 226
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.52 E-value=0.00014 Score=50.12 Aligned_cols=19 Identities=16% Similarity=0.127 Sum_probs=16.5
Q ss_pred CCCeEEEEEeeCCCCCCCCc
Q psy5399 30 KGKKVIIFGVPGAFTPGCSV 49 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~ 49 (156)
.+|+++|.|+ +.||++|+.
T Consensus 41 ~~K~vlvd~~-a~wC~~C~~ 59 (153)
T 2dlx_A 41 QNKWLMINIQ-NVQDFACQC 59 (153)
T ss_dssp HTCEEEEEEE-CSCTTTHHH
T ss_pred cCCeEEEEEE-CCCCHhHHH
Confidence 4889999988 899999984
No 227
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.45 E-value=0.00014 Score=56.62 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=41.1
Q ss_pred CCeEEEEEeeCCCCCCCCcCChh-------hHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEecCCch
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLP-------GYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLADPNLE 103 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~-------~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~~~ 103 (156)
+++++|.|| ++||++|.. .+ .+.++++.+...++. +..|..+ .+..
T Consensus 30 ~~~vlV~Fy-ApWC~~~~~--~~~l~~~~p~~e~~a~~~~~~~v~-~~~Vd~~-----------------------~~~~ 82 (367)
T 3us3_A 30 YEVLALLYH-EPPEDDKAS--QRQFEMEELILELAAQVLEDKGVG-FGLVDSE-----------------------KDAA 82 (367)
T ss_dssp CSEEEEEEE-CCCCSSHHH--HHHHHHHHHHHHHHHHHHTTTTEE-EEEEETT-----------------------TTHH
T ss_pred CCeEEEEEE-CCCchhHHH--hhhhccccHHHHHHHHHhhcCCce-EEEEeCc-----------------------ccHH
Confidence 566777777 999999862 34 556666666533444 4444433 3446
Q ss_pred hHHhhCCeeeccCCCcceeeeEEEEEeCCcE
Q psy5399 104 FTKKLGVEHEIPVLGGWRSKRYSMVVDDGKI 134 (156)
Q Consensus 104 ~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I 134 (156)
++++|||.. .|+.+++.+|++
T Consensus 83 l~~~~~V~~----------~PTl~~f~~G~~ 103 (367)
T 3us3_A 83 VAKKLGLTE----------EDSIYVFKEDEV 103 (367)
T ss_dssp HHHHHTCCS----------TTEEEEEETTEE
T ss_pred HHHHcCCCc----------CceEEEEECCcE
Confidence 778888742 333666677766
No 228
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.43 E-value=6.6e-05 Score=54.26 Aligned_cols=33 Identities=15% Similarity=0.003 Sum_probs=17.9
Q ss_pred CCeEEEEEeeCC-CCCCCCc--CChhhHHHhHHHHH
Q psy5399 31 GKKVIIFGVPGA-FTPGCSV--THLPGYLAKEKDLK 63 (156)
Q Consensus 31 gk~vvl~f~~~~-~cp~C~~--~~l~~l~~~~~~~~ 63 (156)
.++++|.||... |||+|.. .-+|.+.++++++.
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~ 55 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAV 55 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccC
Confidence 457787777444 4555541 12455555555553
No 229
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.40 E-value=1.7e-05 Score=51.29 Aligned_cols=29 Identities=7% Similarity=0.009 Sum_probs=19.7
Q ss_pred hHhCCCeEEEEEeeCCCCCCCCcCChhhHHHh
Q psy5399 27 DAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAK 58 (156)
Q Consensus 27 ~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~ 58 (156)
++.+++++++ || ++|||+|.. ..+.|.++
T Consensus 15 ~~~~~~~vv~-f~-a~~C~~C~~-~~~~l~~~ 43 (116)
T 2e7p_A 15 ELASSAPVVV-FS-KTYCGYCNR-VKQLLTQV 43 (116)
T ss_dssp HHHTSSSEEE-EE-CTTCHHHHH-HHHHHHHH
T ss_pred HHHcCCCEEE-EE-CCCChhHHH-HHHHHHHc
Confidence 3346666655 55 999999995 46666655
No 230
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.38 E-value=6e-05 Score=60.91 Aligned_cols=44 Identities=11% Similarity=0.233 Sum_probs=33.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
.+++++|.|| ++||++|+.. .|.+.++++++...+.. ++.+..|
T Consensus 375 ~~k~vlv~F~-a~wC~~C~~~-~p~~~~l~~~~~~~~~~-v~~~~vd 418 (504)
T 2b5e_A 375 PKKDVLVLYY-APWCGHCKRL-APTYQELADTYANATSD-VLIAKLD 418 (504)
T ss_dssp TTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHHHCSS-CEEEEEE
T ss_pred CCCCEEEEEE-CCCChhHHHH-hHHHHHHHHHhhccCCc-EEEEEec
Confidence 4788888888 9999999964 79999999999733333 4444444
No 231
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.24 E-value=8.6e-05 Score=54.70 Aligned_cols=38 Identities=8% Similarity=0.100 Sum_probs=23.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEE
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCI 73 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~i 73 (156)
.++.+|+.|+ ..|||+|... .+.+.++.++ .++. |..+
T Consensus 96 ~ak~~v~~F~-D~~Cp~C~~~-~~~l~~~~~~---g~v~-v~~~ 133 (241)
T 1v58_A 96 DAPVIVYVFA-DPFCPYCKQF-WQQARPWVDS---GKVQ-LRTL 133 (241)
T ss_dssp TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHT---TSEE-EEEE
T ss_pred CCCeEEEEEE-CCCChhHHHH-HHHHHHHHhC---CcEE-EEEE
Confidence 3444555554 9999999964 4777765543 2355 5443
No 232
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.09 E-value=7.2e-05 Score=52.67 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=25.9
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEE
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCI 73 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~i 73 (156)
++.+|+.|| ..+||+|... .+.+.++.+++.. .+. +..+
T Consensus 25 a~v~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v~-~~~~ 63 (193)
T 2rem_A 25 GKIEVVEIF-GYTCPHCAHF-DSKLQAWGARQAK-DVR-FTLV 63 (193)
T ss_dssp TCEEEEEEE-CTTCHHHHHH-HHHHHHHHHTSCT-TEE-EEEE
T ss_pred CCeEEEEEE-CCCChhHhhh-hHHHHHHHHhcCC-ceE-EEEe
Confidence 444555555 8999999964 6888888877642 344 4434
No 233
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.02 E-value=0.00055 Score=49.14 Aligned_cols=56 Identities=4% Similarity=-0.069 Sum_probs=34.3
Q ss_pred CeEEEEEeeCC-CCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCc
Q psy5399 32 KKVIIFGVPGA-FTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEG 92 (156)
Q Consensus 32 k~vvl~f~~~~-~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~ 92 (156)
++++|.+|++. ||++|.. ..|.+.++++.. ..+. ++.|..+.++. .+.+++++...
T Consensus 22 ~~v~lv~f~~~~~C~~C~~-~~~~~~~la~~~--~~v~-~~~vd~~~~~~-~~~~~~~~v~~ 78 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQ-LKQLVQELSELT--DKLS-YEIVDFDTPEG-KELAKRYRIDR 78 (226)
T ss_dssp SCEEEEEEECSSSCTTHHH-HHHHHHHHHTTC--TTEE-EEEEETTSHHH-HHHHHHTTCCS
T ss_pred CCeEEEEEecCCCCchhHH-HHHHHHHHHhhC--CceE-EEEEeCCCccc-HHHHHHcCCCc
Confidence 45555555588 9999995 357777776432 2455 66677665322 44556666543
No 234
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.90 E-value=7.9e-05 Score=45.34 Aligned_cols=37 Identities=5% Similarity=-0.048 Sum_probs=25.5
Q ss_pred EEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 35 IIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 35 vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
|+.| .++|||+|.. ..+.|.++.+++. ++. +..+..+
T Consensus 3 v~~f-~~~~C~~C~~-~~~~l~~l~~~~~--~i~-~~~vdi~ 39 (85)
T 1ego_A 3 TVIF-GRSGCPYCVR-AKDLAEKLSNERD--DFQ-YQYVDIR 39 (85)
T ss_dssp EEEE-CCTTSTHHHH-HHHHHHHHHHHHS--SCE-EEEECHH
T ss_pred EEEE-eCCCCCCHHH-HHHHHHHHHhcCC--Cce-EEEEecc
Confidence 3444 4899999995 4677777776653 676 7766654
No 235
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.86 E-value=7.1e-05 Score=45.35 Aligned_cols=24 Identities=13% Similarity=-0.103 Sum_probs=15.8
Q ss_pred EEEEeeCCCCCCCCcCChhhHHHhHH
Q psy5399 35 IIFGVPGAFTPGCSVTHLPGYLAKEK 60 (156)
Q Consensus 35 vl~f~~~~~cp~C~~~~l~~l~~~~~ 60 (156)
+++|+ ++|||+|.. ..+.+.++.+
T Consensus 4 ~~~f~-~~~C~~C~~-~~~~l~~~~~ 27 (80)
T 2k8s_A 4 KAIFY-HAGCPVCVS-AEQAVANAID 27 (80)
T ss_dssp EEEEE-ECSCHHHHH-HHHHHHHHSC
T ss_pred eEEEe-CCCCCchHH-HHHHHHHHHH
Confidence 34444 899999995 4566665543
No 236
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.82 E-value=0.0013 Score=39.47 Aligned_cols=50 Identities=10% Similarity=0.037 Sum_probs=27.5
Q ss_pred eeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEe
Q psy5399 39 VPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 39 ~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~ 98 (156)
|.++|||+|.. ..+.|. +.++. +..+..+......++.++++... +|.+.
T Consensus 6 f~~~~C~~C~~-~~~~l~-------~~~i~-~~~vdi~~~~~~~~~~~~~g~~~-vP~~~ 55 (81)
T 1h75_A 6 YTRNDCVQCHA-TKRAME-------NRGFD-FEMINVDRVPEAAEALRAQGFRQ-LPVVI 55 (81)
T ss_dssp EECTTCHHHHH-HHHHHH-------HTTCC-CEEEETTTCHHHHHHHHHTTCCS-SCEEE
T ss_pred EcCCCChhHHH-HHHHHH-------HCCCC-eEEEECCCCHHHHHHHHHhCCCc-cCEEE
Confidence 34899999994 233333 34677 77788764333333333444332 44433
No 237
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.77 E-value=9e-05 Score=47.16 Aligned_cols=51 Identities=10% Similarity=0.090 Sum_probs=28.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcC
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNN 89 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~ 89 (156)
..+++|+.|+ +.|||+|.. ..+.|.++. .++. +.-+..++++. .+++++++
T Consensus 14 ~~~~~v~~f~-~~~C~~C~~-~~~~L~~l~-----~~i~-~~~vdi~~~~~-~el~~~~g 64 (100)
T 1wjk_A 14 RALPVLTLFT-KAPCPLCDE-AKEVLQPYK-----DRFI-LQEVDITLPEN-STWYERYK 64 (100)
T ss_dssp CCCCEEEEEE-CSSCHHHHH-HHHHTSTTS-----SSSE-EEEEETTSSTT-HHHHHHSS
T ss_pred CCCCEEEEEe-CCCCcchHH-HHHHHHHhh-----hCCe-EEEEECCCcch-HHHHHHHC
Confidence 3445666655 899999994 345554433 2365 77777663221 34444555
No 238
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.57 E-value=0.00055 Score=44.30 Aligned_cols=37 Identities=8% Similarity=0.013 Sum_probs=24.9
Q ss_pred EEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC
Q psy5399 34 VIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN 76 (156)
Q Consensus 34 vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d 76 (156)
.|+.|+ ++|||+|.. ..+.|.++.+++ ++. +.-|..+
T Consensus 31 ~vv~y~-~~~C~~C~~-a~~~L~~l~~e~---~i~-~~~vDId 67 (107)
T 2fgx_A 31 KLVVYG-REGCHLCEE-MIASLRVLQKKS---WFE-LEVINID 67 (107)
T ss_dssp CEEEEE-CSSCHHHHH-HHHHHHHHHHHS---CCC-CEEEETT
T ss_pred EEEEEe-CCCChhHHH-HHHHHHHHHHhc---CCe-EEEEECC
Confidence 455554 899999995 456676676543 566 6666665
No 239
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.54 E-value=0.0055 Score=37.46 Aligned_cols=50 Identities=10% Similarity=0.058 Sum_probs=31.3
Q ss_pred eeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHc-CCCcceEEEec
Q psy5399 39 VPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKN-NAEGKIRFLAD 99 (156)
Q Consensus 39 ~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~-~~~~~f~~~~D 99 (156)
|..+|||+|.. ..+.| .+.++. +..+..+ ++...++.+.+ +... +|.+..
T Consensus 11 y~~~~C~~C~~-~~~~L-------~~~~i~-~~~vdv~-~~~~~~l~~~~~~~~~-vP~l~~ 61 (89)
T 2klx_A 11 YTRPNCPYCKR-ARDLL-------DKKGVK-YTDIDAS-TSLRQEMVQRANGRNT-FPQIFI 61 (89)
T ss_dssp ESCSCCTTTHH-HHHHH-------HHHTCC-EEEECSC-HHHHHHHHHHHHSSCC-SCEEEE
T ss_pred EECCCChhHHH-HHHHH-------HHcCCC-cEEEECC-HHHHHHHHHHhCCCCC-cCEEEE
Confidence 34889999993 22222 233677 7778777 55556666666 5543 776554
No 240
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.43 E-value=0.0014 Score=38.52 Aligned_cols=50 Identities=4% Similarity=-0.047 Sum_probs=27.0
Q ss_pred eeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEe
Q psy5399 39 VPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 39 ~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~ 98 (156)
|...|||+|.. ..+.|. +.++. +..+..+......++.++++... +|.+.
T Consensus 6 y~~~~C~~C~~-~~~~l~-------~~~i~-~~~~di~~~~~~~~~~~~~~~~~-vP~l~ 55 (75)
T 1r7h_A 6 YTKPACVQCTA-TKKALD-------RAGLA-YNTVDISLDDEARDYVMALGYVQ-APVVE 55 (75)
T ss_dssp EECTTCHHHHH-HHHHHH-------HTTCC-CEEEETTTCHHHHHHHHHTTCBC-CCEEE
T ss_pred EeCCCChHHHH-HHHHHH-------HcCCC-cEEEECCCCHHHHHHHHHcCCCc-cCEEE
Confidence 44889999994 233333 34677 77777764333333334444322 44443
No 241
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=96.25 E-value=0.00066 Score=45.06 Aligned_cols=31 Identities=3% Similarity=-0.126 Sum_probs=23.5
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA 64 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~ 64 (156)
+.++++.|| +. |..|.. ..|.|.+++++|+.
T Consensus 23 ~~pv~v~f~-a~-~~~c~~-~~p~l~~~A~~~~g 53 (133)
T 2djk_A 23 GIPLAYIFA-ET-AEERKE-LSDKLKPIAEAQRG 53 (133)
T ss_dssp TSCEEEEEC-SC-SSSHHH-HHHHHHHHHHSSTT
T ss_pred CCCEEEEEe-cC-hhhHHH-HHHHHHHHHHHhCC
Confidence 567777776 77 788984 46999999888763
No 242
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.16 E-value=0.019 Score=36.57 Aligned_cols=62 Identities=16% Similarity=0.016 Sum_probs=36.9
Q ss_pred hhHhCCCeEEEEEeeC----CCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHHHHHHHHHcCCCcceEEEe
Q psy5399 26 ADAIKGKKVIIFGVPG----AFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 26 ~~~~~gk~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~~~~~~f~~~~ 98 (156)
.++.+..+++|++. + +|||+|.. . ..+ +.+.++. +..+..+ +++...++.+..+... +|.+.
T Consensus 9 ~~~i~~~~vvvy~~-g~~~~~~Cp~C~~-a-k~~------L~~~~i~-~~~vdi~~~~~~~~~l~~~~g~~~-vP~if 75 (109)
T 1wik_A 9 KVLTNKASVMLFMK-GNKQEAKCGFSKQ-I-LEI------LNSTGVE-YETFDILEDEEVRQGLKTFSNWPT-YPQLY 75 (109)
T ss_dssp HHHHTTSSEEEEES-STTTCCCSSTHHH-H-HHH------HHHTCSC-EEEEESSSCHHHHHHHHHHHSCCS-SCEEE
T ss_pred HHHhccCCEEEEEe-cCCCCCCCchHHH-H-HHH------HHHcCCC-eEEEECCCCHHHHHHHHHHhCCCC-CCEEE
Confidence 34345556666553 4 89999993 3 222 2345788 8778776 4554555666666443 77554
No 243
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.10 E-value=0.01 Score=37.59 Aligned_cols=60 Identities=15% Similarity=-0.011 Sum_probs=33.3
Q ss_pred hCCCeEEEEEee---CCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHHHHHHHHHcCCCcceEEEe
Q psy5399 29 IKGKKVIIFGVP---GAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 29 ~~gk~vvl~f~~---~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~~~~~~f~~~~ 98 (156)
.+.++++|++.. ++|||+|.. ..+.| .+.++. +.-+..+ +++..+.+.+..+... +|.+.
T Consensus 14 i~~~~vvvf~~g~~~~~~C~~C~~-~~~~L-------~~~~i~-~~~vdi~~~~~~~~~l~~~~g~~~-vP~v~ 77 (105)
T 2yan_A 14 TNKASVMLFMKGNKQEAKCGFSKQ-ILEIL-------NSTGVE-YETFDILEDEEVRQGLKAYSNWPT-YPQLY 77 (105)
T ss_dssp HTSSSEEEEESBCSSSBCTTHHHH-HHHHH-------HHHTCC-CEEEEGGGCHHHHHHHHHHHTCCS-SCEEE
T ss_pred hccCCEEEEEecCCCCCCCccHHH-HHHHH-------HHCCCC-eEEEECCCCHHHHHHHHHHHCCCC-CCeEE
Confidence 455566664421 189999983 22332 223677 7777765 4454455556566543 66554
No 244
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.09 E-value=0.0089 Score=37.38 Aligned_cols=43 Identities=16% Similarity=0.134 Sum_probs=26.5
Q ss_pred EEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC-HHHHHHHHHH
Q psy5399 34 VIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND-AFVMEAWCRK 87 (156)
Q Consensus 34 vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~ 87 (156)
++|| ..+|||+|. . ...+ +.+.|+. +--+..+. ++..+.+.+.
T Consensus 6 I~vY--s~~~Cp~C~-~-aK~~------L~~~gi~-y~~idi~~d~~~~~~~~~~ 49 (92)
T 2lqo_A 6 LTIY--TTSWCGYCL-R-LKTA------LTANRIA-YDEVDIEHNRAAAEFVGSV 49 (92)
T ss_dssp EEEE--ECTTCSSHH-H-HHHH------HHHTTCC-CEEEETTTCHHHHHHHHHH
T ss_pred EEEE--cCCCCHhHH-H-HHHH------HHhcCCc-eEEEEcCCCHHHHHHHHHH
Confidence 4444 389999999 3 3333 3456888 77777764 5444444443
No 245
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.92 E-value=0.0032 Score=51.22 Aligned_cols=54 Identities=9% Similarity=-0.108 Sum_probs=35.0
Q ss_pred CeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCc
Q psy5399 32 KKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEG 92 (156)
Q Consensus 32 k~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~ 92 (156)
+++.|.+|+++|||+|+. ..|.+.++..++. ++. +.-|..+.. .+.+++++...
T Consensus 117 ~~~~i~~f~a~~C~~C~~-~~~~l~~~a~~~~--~v~-~~~vd~~~~---~~~~~~~~i~s 170 (521)
T 1hyu_A 117 GDFEFETYYSLSCHNCPD-VVQALNLMAVLNP--RIK-HTAIDGGTF---QNEITERNVMG 170 (521)
T ss_dssp SCEEEEEEECTTCSSHHH-HHHHHHHHHHHCT--TEE-EEEEETTTC---HHHHHHTTCCS
T ss_pred CCcceEEEECCCCcCcHH-HHHHHHHHHhHcC--ceE-EEEEechhh---HHHHHHhCCCc
Confidence 345455555999999995 4688888887764 555 666666532 33455666543
No 246
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=95.87 E-value=0.0096 Score=44.06 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=28.4
Q ss_pred CCCeEEEEEee-CCCCCCCCcCChhhHHHhHHHHHH--cCCCEEEEEecCC
Q psy5399 30 KGKKVIIFGVP-GAFTPGCSVTHLPGYLAKEKDLKA--KGIHEIFCIAVND 77 (156)
Q Consensus 30 ~gk~vvl~f~~-~~~cp~C~~~~l~~l~~~~~~~~~--~~~~~v~~is~d~ 77 (156)
.+++++|.||. ++||+ . .|.+.++++++.. ..+. |.-|..++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l-~P~~e~lA~~~~~~~~~v~-~akVD~d~ 76 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----K-HEAFTAFSKSAHKATKDLL-IATVGVKD 76 (248)
T ss_dssp TSSEEEEEEEESSCCSH----H-HHHHHHHHHHHHHHCSSEE-EEEEEECS
T ss_pred cCCCEEEEEECCCCCCc----c-HHHHHHHHHHHhccCCCeE-EEEEECCc
Confidence 34567777764 78887 3 5999999999975 3444 55566553
No 247
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.86 E-value=0.0033 Score=43.33 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=33.8
Q ss_pred CceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcC-CCEEEEEe
Q psy5399 20 QTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKG-IHEIFCIA 74 (156)
Q Consensus 20 g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~-~~~v~~is 74 (156)
...+.+++ -.++.+|+.|+ ..+||+|... .+.+.++.++|.+.+ +. ++...
T Consensus 17 ~~~~~~G~-~~a~v~i~~f~-D~~Cp~C~~~-~~~~~~~~~~~~~~~~v~-~~~~~ 68 (175)
T 1z6m_A 17 ETGLHIGE-SNAPVKMIEFI-NVRCPYCRKW-FEESEELLAQSVKSGKVE-RIIKL 68 (175)
T ss_dssp SSSEEESC-TTCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHHTTSEE-EEEEE
T ss_pred CCCcccCC-CCCCeEEEEEE-CCCCcchHHH-HHHHHHHHHHHhhCCcEE-EEEEe
Confidence 34466666 35655555554 8999999965 589988888884433 55 55543
No 248
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=95.70 E-value=0.0042 Score=45.76 Aligned_cols=39 Identities=5% Similarity=0.063 Sum_probs=26.0
Q ss_pred CCeEEEEEeeC--CCCCCCCcCChhhHHHhHHHHHH-cCCCEEEEEecC
Q psy5399 31 GKKVIIFGVPG--AFTPGCSVTHLPGYLAKEKDLKA-KGIHEIFCIAVN 76 (156)
Q Consensus 31 gk~vvl~f~~~--~~cp~C~~~~l~~l~~~~~~~~~-~~~~~v~~is~d 76 (156)
+++++|.|| + +||+ . .|.+.++++++.. .++. |..|..+
T Consensus 22 ~~~vlV~Fy-A~~pWCg----l-~P~~e~lA~~~~~~~~v~-~akVDvd 63 (240)
T 2qc7_A 22 SKFVLVKFD-TQYPYGE----K-QDEFKRLAENSASSDDLL-VAEVGIS 63 (240)
T ss_dssp CSEEEEEEC-CSSCCSH----H-HHHHHHHHHHHTTCTTEE-EEEECCC
T ss_pred CCCEEEEEe-CCCCCCc----c-hHHHHHHHHHhcCCCCeE-EEEEeCC
Confidence 567788877 6 7777 3 5999999998864 2333 4444433
No 249
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.37 E-value=0.0015 Score=46.21 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=27.3
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEe
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is 74 (156)
++++|+.|| ..|||+|... -|.+.++.+++.+ .+. +.-+.
T Consensus 24 ~~v~vv~f~-d~~Cp~C~~~-~~~l~~~~~~~~~-~v~-~~~~p 63 (193)
T 3hz8_A 24 GKVEVLEFF-GYFCPHCAHL-EPVLSKHAKSFKD-DMY-LRTEH 63 (193)
T ss_dssp TSEEEEEEE-CTTCHHHHHH-HHHHHHHHTTCCT-TEE-EEEEE
T ss_pred CCcEEEEEE-CCCChhHHHH-HHHHHHHHHHCCC-CeE-EEEec
Confidence 565666666 9999999965 5888888777654 343 44443
No 250
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.30 E-value=0.003 Score=45.36 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=23.7
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEE
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCI 73 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~i 73 (156)
++++|+.|+ ..|||+|... .+.+.++. +.++. +..+
T Consensus 86 ~k~~vv~F~-d~~Cp~C~~~-~~~l~~~~----~~~v~-v~~~ 121 (211)
T 1t3b_A 86 EKHVVTVFM-DITCHYCHLL-HQQLKEYN----DLGIT-VRYL 121 (211)
T ss_dssp CSEEEEEEE-CTTCHHHHHH-HTTHHHHH----HTTEE-EEEE
T ss_pred CCEEEEEEE-CCCCHhHHHH-HHHHHHHH----hCCcE-EEEE
Confidence 445666665 9999999964 58877743 33565 6544
No 251
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=95.28 E-value=0.012 Score=34.92 Aligned_cols=50 Identities=12% Similarity=0.117 Sum_probs=28.6
Q ss_pred eCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC-HHHHHHHHHHcCCCcceEEEec
Q psy5399 40 PGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND-AFVMEAWCRKNNAEGKIRFLAD 99 (156)
Q Consensus 40 ~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~~~~~~~f~~~~D 99 (156)
..+|||+|.. ..+.|. +.++. +.-+..+. ++...++.+.++... +|.+..
T Consensus 7 ~~~~C~~C~~-~~~~l~-------~~~i~-~~~~~i~~~~~~~~~~~~~~~~~~-vP~l~~ 57 (82)
T 1fov_A 7 TKETCPYCHR-AKALLS-------SKGVS-FQELPIDGNAAKREEMIKRSGRTT-VPQIFI 57 (82)
T ss_dssp ECSSCHHHHH-HHHHHH-------HHTCC-CEEEECTTCSHHHHHHHHHHSSCC-SCEEEE
T ss_pred ECCCChhHHH-HHHHHH-------HCCCC-cEEEECCCCHHHHHHHHHHhCCCC-cCEEEE
Confidence 3789999983 223222 23676 66666653 344455666666543 665544
No 252
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=95.21 E-value=0.019 Score=35.04 Aligned_cols=50 Identities=12% Similarity=0.026 Sum_probs=29.8
Q ss_pred eCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC-HHHHHHHHHHcCCCcceEEEec
Q psy5399 40 PGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND-AFVMEAWCRKNNAEGKIRFLAD 99 (156)
Q Consensus 40 ~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~~~~~~~f~~~~D 99 (156)
..+|||+|+. ..+. +.+.++. +..+..+. ++...++.+.++... +|.+..
T Consensus 12 ~~~~C~~C~~-~~~~-------L~~~~i~-~~~~di~~~~~~~~~l~~~~~~~~-vP~l~~ 62 (92)
T 2khp_A 12 TRPGCPYCAR-AKAL-------LARKGAE-FNEIDASATPELRAEMQERSGRNT-FPQIFI 62 (92)
T ss_dssp ECTTCHHHHH-HHHH-------HHHTTCC-CEEEESTTSHHHHHHHHHHHTSSC-CCEEEE
T ss_pred ECCCChhHHH-HHHH-------HHHcCCC-cEEEECCCCHHHHHHHHHHhCCCC-cCEEEE
Confidence 3889999983 2222 2334677 77777763 444555666666443 665544
No 253
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=95.07 E-value=0.0018 Score=40.82 Aligned_cols=29 Identities=17% Similarity=0.093 Sum_probs=16.5
Q ss_pred hHhCCCeEEEEEeeCCCCCCCCcCChhhHHHh
Q psy5399 27 DAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAK 58 (156)
Q Consensus 27 ~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~ 58 (156)
+..+...+ +.|+ ++|||+|.. ..+.|.++
T Consensus 7 ~~i~~~~v-~~f~-~~~C~~C~~-~~~~L~~~ 35 (105)
T 1kte_A 7 SKIQPGKV-VVFI-KPTCPFCRK-TQELLSQL 35 (105)
T ss_dssp HHCCTTCE-EEEE-CSSCHHHHH-HHHHHHHS
T ss_pred hhcccCCE-EEEE-cCCCHhHHH-HHHHHHHc
Confidence 33334443 4444 899999994 34555443
No 254
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.01 E-value=0.0014 Score=46.85 Aligned_cols=42 Identities=19% Similarity=0.182 Sum_probs=30.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhH---HHhHHHHHHcCCCEEEEEec
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGY---LAKEKDLKAKGIHEIFCIAV 75 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~~~~v~~is~ 75 (156)
.++++||-|| +.|||+|... -|.+ .++.+++.+ ++. +.-+..
T Consensus 112 ~~~~~vveFf-~~~C~~C~~~-~p~~~~~~~l~~~~~~-~v~-~~~~~v 156 (197)
T 1un2_A 112 AGAPQVLEFF-SFFCPHCYQF-EEVLHISDNVKKKLPE-GVK-MTKYHV 156 (197)
T ss_dssp TTCCSEEEEE-CTTCHHHHHH-HHTSCHHHHHTTSSCT-TCC-EEEEEC
T ss_pred CCCCEEEEEE-CCCChhHHHh-CcccccHHHHHHHCCC-CCE-EEEecc
Confidence 3567888887 8999999965 4777 777777753 466 655554
No 255
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.83 E-value=0.017 Score=36.43 Aligned_cols=55 Identities=18% Similarity=0.221 Sum_probs=29.9
Q ss_pred CeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC-HHHHHHHHHHc-CCCcceEEEe
Q psy5399 32 KKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND-AFVMEAWCRKN-NAEGKIRFLA 98 (156)
Q Consensus 32 k~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~~-~~~~~f~~~~ 98 (156)
.+++|+. .+|||+|.. . ..+- .+.++. +..+..+. ++..+++.+.. +... +|.+.
T Consensus 16 ~~v~vy~--~~~Cp~C~~-a-k~~L------~~~~i~-y~~idI~~~~~~~~~l~~~~~g~~~-vP~if 72 (99)
T 3qmx_A 16 AKIEIYT--WSTCPFCMR-A-LALL------KRKGVE-FQEYCIDGDNEAREAMAARANGKRS-LPQIF 72 (99)
T ss_dssp CCEEEEE--CTTCHHHHH-H-HHHH------HHHTCC-CEEEECTTCHHHHHHHHHHTTTCCC-SCEEE
T ss_pred CCEEEEE--cCCChhHHH-H-HHHH------HHCCCC-CEEEEcCCCHHHHHHHHHHhCCCCC-CCEEE
Confidence 3455443 889999993 3 3222 233677 66677654 44444454544 4332 66544
No 256
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=94.72 E-value=0.031 Score=35.63 Aligned_cols=56 Identities=11% Similarity=0.175 Sum_probs=28.8
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC----HHHHHHHH-HHcCCCcceEEEe
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND----AFVMEAWC-RKNNAEGKIRFLA 98 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~----~~~~~~~~-~~~~~~~~f~~~~ 98 (156)
.+++++ | ..+|||+|.. ..+.| .+.++. .-.+..+. ..+.+++. +..+... +|.+.
T Consensus 18 ~~~v~v-y-~~~~Cp~C~~-~~~~L-------~~~~i~-~~~~di~~~~~~~~~~~~~l~~~~g~~t-vP~if 78 (113)
T 3rhb_A 18 ENTVVI-Y-SKTWCSYCTE-VKTLF-------KRLGVQ-PLVVELDQLGPQGPQLQKVLERLTGQHT-VPNVF 78 (113)
T ss_dssp HSSEEE-E-ECTTCHHHHH-HHHHH-------HHTTCC-CEEEEGGGSTTHHHHHHHHHHHHHSCCS-SCEEE
T ss_pred cCCEEE-E-ECCCChhHHH-HHHHH-------HHcCCC-CeEEEeecCCCChHHHHHHHHHHhCCCC-cCEEE
Confidence 344444 3 3889999993 32222 234666 55555542 33444444 4445543 66554
No 257
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=94.66 E-value=0.0088 Score=41.95 Aligned_cols=38 Identities=11% Similarity=-0.022 Sum_probs=28.6
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEe
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is 74 (156)
++++|+.|| ..|||+|...+ |.+.++.+++ ++. +.-+.
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~-~~~~~~~~~~---~v~-~~~~p 59 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNME-NFLPVISQEA---GTD-IGKMH 59 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHG-GGHHHHHHHH---TSC-CEEEE
T ss_pred CCCEEEEEE-CCCChhHHHhh-HHHHHHHHHh---CCe-EEEEe
Confidence 577788877 88999999764 9999888888 455 54443
No 258
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=94.64 E-value=0.053 Score=34.83 Aligned_cols=61 Identities=10% Similarity=-0.041 Sum_probs=35.0
Q ss_pred hhHhCCCeEEEEEeeC-----CCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHHHHHHHHHcCCCcceEEEe
Q psy5399 26 ADAIKGKKVIIFGVPG-----AFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 26 ~~~~~gk~vvl~f~~~-----~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~~~~~~f~~~~ 98 (156)
.++.+.++|+|+. . +|||+|.. . ..+ +.+.|+. +-.+..+ +++..+.+.+..+... +|.+.
T Consensus 10 ~~~i~~~~Vvlf~--kg~~~~~~Cp~C~~-a-k~~------L~~~gi~-y~~~di~~d~~~~~~l~~~~g~~t-vP~if 76 (111)
T 3zyw_A 10 KKLTHAAPCMLFM--KGTPQEPRCGFSKQ-M-VEI------LHKHNIQ-FSSFDIFSDEEVRQGLKAYSSWPT-YPQLY 76 (111)
T ss_dssp HHHHTSSSEEEEE--SBCSSSBSSHHHHH-H-HHH------HHHTTCC-CEEEEGGGCHHHHHHHHHHHTCCS-SCEEE
T ss_pred HHHHhcCCEEEEE--ecCCCCCcchhHHH-H-HHH------HHHcCCC-eEEEECcCCHHHHHHHHHHHCCCC-CCEEE
Confidence 3445667777776 4 78999993 3 332 2345777 6666654 4444445544445432 77443
No 259
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=94.61 E-value=0.024 Score=34.87 Aligned_cols=21 Identities=5% Similarity=-0.024 Sum_probs=13.0
Q ss_pred EEEEeeCCCCCCCCcCChhhHHH
Q psy5399 35 IIFGVPGAFTPGCSVTHLPGYLA 57 (156)
Q Consensus 35 vl~f~~~~~cp~C~~~~l~~l~~ 57 (156)
|+.| +++||++|.. ..|.|.+
T Consensus 3 vv~f-~a~~C~~C~~-~~~~L~~ 23 (87)
T 1ttz_A 3 LTLY-QRDDCHLCDQ-AVEALAQ 23 (87)
T ss_dssp EEEE-ECSSCHHHHH-HHHHHHH
T ss_pred EEEE-ECCCCchHHH-HHHHHHH
Confidence 3444 4999999994 3344433
No 260
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.47 E-value=0.04 Score=36.30 Aligned_cols=56 Identities=7% Similarity=0.051 Sum_probs=30.0
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC----HHHHHHHHHHcCCCcceEEEe
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND----AFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~----~~~~~~~~~~~~~~~~f~~~~ 98 (156)
.++++| |+ .+|||+|.. ..+.|.+ .++. +..+..+. ++...++.+.++... +|.+.
T Consensus 26 ~~~vvv-f~-~~~Cp~C~~-~~~~L~~-------~~i~-~~~vdid~~~~~~~~~~~l~~~~g~~~-vP~l~ 85 (130)
T 2cq9_A 26 DNCVVI-FS-KTSCSYCTM-AKKLFHD-------MNVN-YKVVELDLLEYGNQFQDALYKMTGERT-VPRIF 85 (130)
T ss_dssp HSSEEE-EE-CSSCSHHHH-HHHHHHH-------HTCC-CEEEETTTSTTHHHHHHHHHHHHSSCC-SSEEE
T ss_pred CCcEEE-EE-cCCChHHHH-HHHHHHH-------cCCC-cEEEECcCCcCcHHHHHHHHHHhCCCC-cCEEE
Confidence 344555 44 899999994 2333332 2566 65566553 333344555666443 55443
No 261
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=94.33 E-value=0.045 Score=35.16 Aligned_cols=56 Identities=11% Similarity=0.256 Sum_probs=29.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC---CHHHHHH-HHHHcCCCcceEEE
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN---DAFVMEA-WCRKNNAEGKIRFL 97 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d---~~~~~~~-~~~~~~~~~~f~~~ 97 (156)
+.++++| |..+|||+|.. . ..+ +.+.|+. +-.+..+ +..+.++ +.+..+... +|.+
T Consensus 15 ~~~~v~v--y~~~~Cp~C~~-a-k~~------L~~~~i~-~~~~dvd~~~~~~~~~~~l~~~~g~~t-vP~v 74 (114)
T 3h8q_A 15 ERSRVVI--FSKSYCPHSTR-V-KEL------FSSLGVE-CNVLELDQVDDGARVQEVLSEITNQKT-VPNI 74 (114)
T ss_dssp HHCSEEE--EECTTCHHHHH-H-HHH------HHHTTCC-CEEEETTTSTTHHHHHHHHHHHHSCCS-SCEE
T ss_pred ccCCEEE--EEcCCCCcHHH-H-HHH------HHHcCCC-cEEEEecCCCChHHHHHHHHHHhCCCc-cCEE
Confidence 3445555 33789999983 2 222 2234666 5555555 3444444 445555433 6644
No 262
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.07 E-value=0.021 Score=34.86 Aligned_cols=50 Identities=12% Similarity=0.131 Sum_probs=25.9
Q ss_pred eCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC--CHHH----HHHHHHHcCCCcceEEEec
Q psy5399 40 PGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN--DAFV----MEAWCRKNNAEGKIRFLAD 99 (156)
Q Consensus 40 ~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d--~~~~----~~~~~~~~~~~~~f~~~~D 99 (156)
..+|||+|.. ....|. +.++. +-.+..+ +.+. ..++.+.++... +|.+..
T Consensus 18 ~~~~Cp~C~~-~~~~L~-------~~gi~-~~~~~v~~~~~~~~~~~~~~l~~~~g~~~-vP~l~~ 73 (92)
T 3ic4_A 18 GLSTCPHCKR-TLEFLK-------REGVD-FEVIWIDKLEGEERKKVIEKVHSISGSYS-VPVVVK 73 (92)
T ss_dssp ECTTCHHHHH-HHHHHH-------HHTCC-CEEEEGGGCCHHHHHHHHHHHHHHHSSSC-SCEEEE
T ss_pred ECCCChHHHH-HHHHHH-------HcCCC-cEEEEeeeCCccchHHHHHHHHHhcCCCC-cCEEEE
Confidence 3889999983 222222 23555 4445444 3322 345555665432 665555
No 263
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.02 E-value=0.12 Score=33.07 Aligned_cols=50 Identities=8% Similarity=-0.053 Sum_probs=31.0
Q ss_pred eEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC-HHHHHHHHHH
Q psy5399 33 KVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND-AFVMEAWCRK 87 (156)
Q Consensus 33 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~ 87 (156)
.++|+. .++||+|.. -..-++..+-+.+.++. +-.+..+. ++..+++.+.
T Consensus 9 ~V~vy~--~~~C~~C~~--~~~~~~ak~~L~~~gi~-y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 9 VIRVFI--ASSSGFVAI--KKKQQDVVRFLEANKIE-FEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp CEEEEE--CSSCSCHHH--HHHHHHHHHHHHHTTCC-EEEEETTTCHHHHHHHHHS
T ss_pred EEEEEE--cCCCCCccc--chhHHHHHHHHHHcCCC-EEEEECCCCHHHHHHHHHH
Confidence 344443 788999993 23444455556677888 88888764 4444445544
No 264
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=93.79 E-value=0.044 Score=35.49 Aligned_cols=50 Identities=14% Similarity=0.223 Sum_probs=27.2
Q ss_pred eCCCCCCCCcCChhhHHHhHHHHHHcC---CCEEEEEecCC----HHHHHHHHHHcCCCcceEEEe
Q psy5399 40 PGAFTPGCSVTHLPGYLAKEKDLKAKG---IHEIFCIAVND----AFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 40 ~~~~cp~C~~~~l~~l~~~~~~~~~~~---~~~v~~is~d~----~~~~~~~~~~~~~~~~f~~~~ 98 (156)
..+|||+|. . + |.++ +.+.+ +. +..+..+. ++..++..+..+... +|.+.
T Consensus 31 ~~~~Cp~C~-~-a--lk~~---L~~~~~~~i~-~~~vdid~~~~~~~~~~~l~~~~g~~t-vP~vf 87 (118)
T 3c1r_A 31 SKTYCPYCH-A-A--LNTL---FEKLKVPRSK-VLVLQLNDMKEGADIQAALYEINGQRT-VPNIY 87 (118)
T ss_dssp ECSSCHHHH-H-H--HHHH---HTTSCCCGGG-EEEEEGGGSTTHHHHHHHHHHHHSCCS-SCEEE
T ss_pred EcCCCcCHH-H-H--HHHH---HHHcCCCCCC-eEEEECccCCChHHHHHHHHHHhCCCC-cCEEE
Confidence 389999999 3 3 1222 23345 66 66666642 233445555666533 66443
No 265
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=93.70 E-value=0.046 Score=36.93 Aligned_cols=56 Identities=7% Similarity=0.059 Sum_probs=30.2
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC----HHHHHHHHHHcCCCcceEEEe
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND----AFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~----~~~~~~~~~~~~~~~~f~~~~ 98 (156)
..+++| | ..+|||+|.. ..+.|.+ .++. +..+..+. ++...++.+.++... +|.+.
T Consensus 48 ~~~Vvv-f-~~~~Cp~C~~-~k~~L~~-------~~i~-~~~vdId~~~~~~~~~~~L~~~~g~~t-vP~if 107 (146)
T 2ht9_A 48 DNCVVI-F-SKTSCSYCTM-AKKLFHD-------MNVN-YKVVELDLLEYGNQFQDALYKMTGERT-VPRIF 107 (146)
T ss_dssp HCSEEE-E-ECTTCHHHHH-HHHHHHH-------HTCC-CEEEEGGGCTTHHHHHHHHHHHHSCCC-SCEEE
T ss_pred CCCEEE-E-ECCCChhHHH-HHHHHHH-------cCCC-eEEEECccCcCCHHHHHHHHHHhCCCC-cCeEE
Confidence 344555 4 4899999994 2333332 2555 55555542 333345566666543 66544
No 266
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.63 E-value=0.044 Score=36.66 Aligned_cols=58 Identities=10% Similarity=-0.000 Sum_probs=33.7
Q ss_pred CCCeEEEEEeeC----CCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHHHHHHHHHcCCCcceEEEe
Q psy5399 30 KGKKVIIFGVPG----AFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 30 ~gk~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~~~~~~f~~~~ 98 (156)
+..+++|+.. + .|||+|.. . ..+ +.+.|+. +-.+..+ +++..+++.+..+... +|.+.
T Consensus 33 ~~~~Vvvy~k-s~~~~~~Cp~C~~-a-k~~------L~~~gv~-y~~vdI~~d~~~~~~L~~~~G~~t-vP~Vf 95 (135)
T 2wci_A 33 AENPILLYMK-GSPKLPSCGFSAQ-A-VQA------LAACGER-FAYVDILQNPDIRAELPKYANWPT-FPQLW 95 (135)
T ss_dssp HHCSEEEEES-BCSSSBSSHHHHH-H-HHH------HHTTCSC-CEEEEGGGCHHHHHHHHHHHTCCS-SCEEE
T ss_pred ccCCEEEEEE-ecCCCCCCccHHH-H-HHH------HHHcCCc-eEEEECCCCHHHHHHHHHHHCCCC-cCEEE
Confidence 3345666654 4 68999983 2 332 2344777 7777764 4555555665556543 77544
No 267
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=93.52 E-value=0.15 Score=30.74 Aligned_cols=52 Identities=12% Similarity=-0.003 Sum_probs=31.5
Q ss_pred eeCC----CCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC------CHHHHHHHHHHcCCCc----ceEEEec
Q psy5399 39 VPGA----FTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN------DAFVMEAWCRKNNAEG----KIRFLAD 99 (156)
Q Consensus 39 ~~~~----~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d------~~~~~~~~~~~~~~~~----~f~~~~D 99 (156)
|..+ |||+|. .. ..+ +.+.|+. +-.+..+ +++..+++.+..+... .+|.+.-
T Consensus 5 Y~~~~~~~~Cp~C~-~a-k~~------L~~~gi~-y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i 70 (87)
T 1aba_A 5 YGYDSNIHKCGPCD-NA-KRL------LTVKKQP-FEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA 70 (87)
T ss_dssp EECCTTTSCCHHHH-HH-HHH------HHHTTCC-EEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC
T ss_pred EEeCCCCCcCccHH-HH-HHH------HHHcCCC-EEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE
Confidence 3477 999998 32 322 3445787 6666665 4565566666666641 2776653
No 268
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=93.50 E-value=0.0022 Score=48.64 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=24.6
Q ss_pred ceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHH
Q psy5399 21 TKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKD 61 (156)
Q Consensus 21 ~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~ 61 (156)
..+.+++..+ +..++.|| ++|||+|+.. .|.+.++.++
T Consensus 188 ~~~~la~~l~-~~~vV~F~-A~WC~~Ck~l-~p~le~lA~~ 225 (291)
T 3kp9_A 188 LAVGLAAHLR-QIGGTMYG-AYWCPHCQDQ-KELFGAAFDQ 225 (291)
T ss_dssp THHHHHHHHH-HTTCEEEE-CTTCHHHHHH-HHHHGGGGGG
T ss_pred HHHHHHHHhC-CCCEEEEE-CCCCHHHHHH-HHHHHHHHHH
Confidence 4555666333 33456666 9999999954 5777776643
No 269
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=93.45 E-value=0.044 Score=40.00 Aligned_cols=56 Identities=11% Similarity=-0.008 Sum_probs=34.0
Q ss_pred CCeEEEEEeeCCC--CCCCCcCChhhHHHhHHHHHH-cC---CCEEEEEecCCHHHHHHHHHHcCCCc
Q psy5399 31 GKKVIIFGVPGAF--TPGCSVTHLPGYLAKEKDLKA-KG---IHEIFCIAVNDAFVMEAWCRKNNAEG 92 (156)
Q Consensus 31 gk~vvl~f~~~~~--cp~C~~~~l~~l~~~~~~~~~-~~---~~~v~~is~d~~~~~~~~~~~~~~~~ 92 (156)
+++++|.|| +.| |++|.. ..+.+.++++.+.. +| +. ++-+..+.. .+.++++++..
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~-~~~~l~ela~~~~~~~~~~~v~-~~~vd~d~~---~~~~~~~gv~~ 86 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCED-TLRLMKLFEEESPTRNGGKLLK-LNVYYRESD---SDKFSEFKVER 86 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHH-HHHHHHHHHHHSCEETTEESEE-EEEEETTTT---HHHHHHTTCCS
T ss_pred CCCEEEEEE-eCCCCCCchHH-HHHHHHHHHHhccCCCCCceeE-EEEecCCcC---HHHHHhcCCCc
Confidence 368888888 778 999994 34666667665311 11 44 555554432 34566777654
No 270
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=93.41 E-value=0.0064 Score=42.74 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=27.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhH---HHhHHHHHHcCCCEEEEEe
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGY---LAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~~~~v~~is 74 (156)
.++++|+.|| ..|||+|... -|.+ .++.+++.+ ++. ++-+.
T Consensus 13 ~~~~~vvef~-d~~Cp~C~~~-~~~~~~~~~~~~~~~~-~v~-~~~~~ 56 (189)
T 3l9v_A 13 VDAPAVVEFF-SFYCPPCYAF-SQTMGVDQAIRHVLPQ-GSR-MVKYH 56 (189)
T ss_dssp TTCCSEEEEE-CTTCHHHHHH-HHTSCHHHHHHTTCCT-TCC-EEEEE
T ss_pred CCCCEEEEEE-CCCChhHHHH-hHhccchHHHHHhCCC-CCE-EEEEe
Confidence 4567888887 8999999954 3665 355555543 466 65554
No 271
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=93.24 E-value=0.1 Score=32.65 Aligned_cols=10 Identities=10% Similarity=-0.114 Sum_probs=8.4
Q ss_pred eCCCCCCCCc
Q psy5399 40 PGAFTPGCSV 49 (156)
Q Consensus 40 ~~~~cp~C~~ 49 (156)
..+|||+|..
T Consensus 28 ~~~~Cp~C~~ 37 (103)
T 3nzn_A 28 GLSTCVWCKK 37 (103)
T ss_dssp ECSSCHHHHH
T ss_pred cCCCCchHHH
Confidence 3889999993
No 272
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=93.02 E-value=0.11 Score=31.10 Aligned_cols=44 Identities=9% Similarity=-0.057 Sum_probs=23.1
Q ss_pred EeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCC---HHHHHHHHHHcCC
Q psy5399 38 GVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVND---AFVMEAWCRKNNA 90 (156)
Q Consensus 38 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~---~~~~~~~~~~~~~ 90 (156)
+|..+|||+|.. . .. .+.+.++. +-.+..|. +....++.+..+.
T Consensus 8 ly~~~~Cp~C~~-~-~~------~L~~~~i~-~~~~~vd~~~~~~~~~el~~~~g~ 54 (89)
T 3msz_A 8 IYTRNGCPYCVW-A-KQ------WFEENNIA-FDETIIDDYAQRSKFYDEMNQSGK 54 (89)
T ss_dssp EEECTTCHHHHH-H-HH------HHHHTTCC-CEEEECCSHHHHHHHHHHHHTTTC
T ss_pred EEEcCCChhHHH-H-HH------HHHHcCCC-ceEEEeecCCChhHHHHHHHHhCC
Confidence 344889999983 2 22 22344655 44444442 2233456666655
No 273
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=92.94 E-value=0.24 Score=30.31 Aligned_cols=61 Identities=8% Similarity=0.078 Sum_probs=34.4
Q ss_pred EEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHHHHHHHHHcCCC-cceEEEec
Q psy5399 34 VIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFVMEAWCRKNNAE-GKIRFLAD 99 (156)
Q Consensus 34 vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~~~~-~~f~~~~D 99 (156)
++|+. .++||+|.. ...-.+..+-+.+.|+. +--+..+ +++..+++.+..|.+ ..+|.+.-
T Consensus 4 v~ly~--~~~C~~c~~--~~~~~~ak~~L~~~~i~-~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYS--TSVTGSREI--KSQQSEVTRILDGKRIQ-YQLVDISQDNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEEEE--CSSCSCHHH--HHHHHHHHHHHHHTTCC-CEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEEE--cCCCCCchh--hHHHHHHHHHHHHCCCc-eEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE
Confidence 44443 789999941 23333344445667888 7777765 345445555565631 12775543
No 274
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=92.62 E-value=0.2 Score=31.79 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=33.3
Q ss_pred hhHhCCCeEEEEEeeC----CCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHHHHHHHHHcCCCcceEEE
Q psy5399 26 ADAIKGKKVIIFGVPG----AFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFVMEAWCRKNNAEGKIRFL 97 (156)
Q Consensus 26 ~~~~~gk~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~~~~~~f~~~ 97 (156)
.++.+.++|+|+.- + +|||+|.. . ..+ +.+.|+. +-.+..+ +++..+.+.+..+... +|.+
T Consensus 12 ~~~i~~~~Vvvy~k-~t~~~p~Cp~C~~-a-k~~------L~~~gi~-~~~~dI~~~~~~~~~l~~~~g~~t-vP~i 77 (109)
T 3ipz_A 12 EKLVNSEKVVLFMK-GTRDFPMCGFSNT-V-VQI------LKNLNVP-FEDVNILENEMLRQGLKEYSNWPT-FPQL 77 (109)
T ss_dssp HHHHTSSSEEEEES-BCSSSBSSHHHHH-H-HHH------HHHTTCC-CEEEEGGGCHHHHHHHHHHHTCSS-SCEE
T ss_pred HHHHccCCEEEEEe-cCCCCCCChhHHH-H-HHH------HHHcCCC-cEEEECCCCHHHHHHHHHHHCCCC-CCeE
Confidence 34456666777654 3 37888883 2 222 2345777 6666664 4444445555445433 6644
No 275
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=92.13 E-value=0.06 Score=41.20 Aligned_cols=54 Identities=11% Similarity=0.073 Sum_probs=36.0
Q ss_pred eEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 33 KVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 33 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.++|+|+ +.||+.|.. .++.+.+++++|+.+ +. ++.|..+.. .....++.+++.
T Consensus 137 ~~~v~F~-~~~~~~~~~-~~~~~~~~A~~~~~~-i~-f~~vd~~~~-~~~~~~~~fgi~ 190 (361)
T 3uem_A 137 THILLFL-PKSVSDYDG-KLSNFKTAAESFKGK-IL-FIFIDSDHT-DNQRILEFFGLK 190 (361)
T ss_dssp EEEEEEC-CSSSSSHHH-HHHHHHHHHGGGTTT-CE-EEEECTTSG-GGHHHHHHTTCC
T ss_pred cEEEEEE-eCCchhHHH-HHHHHHHHHHHccCc-eE-EEEecCChH-HHHHHHHHcCCC
Confidence 3455555 889999995 589999999999743 44 555555421 234556666654
No 276
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=91.89 E-value=0.53 Score=39.10 Aligned_cols=122 Identities=12% Similarity=0.062 Sum_probs=69.1
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhC--CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH----------------
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIK--GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA---------------- 64 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~--gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~---------------- 64 (156)
+.+|..+|+..+....+|++++|.+++. |++++|.|- +...+.+.. ..+.++.+.+..
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~-~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 542 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFA-AQNDLAQPE---SGLLALCRFLEGDAASPLRRFTPAGQDI 542 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEEC-CTTTTTCTT---SHHHHHHHHHHHCTTCHHHHHSCTTSCT
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEec-CCCCchhhH---HHHHHHHHHHhhCCccHHHhcCCCCCCc
Confidence 4689999999987335899999999774 678888874 332332220 233444443321
Q ss_pred cC-CCEEEEEecCC---------HHHHHHHHHHcCC-CcceEEEecCC----chhHHhhCCeeeccCCCcceeeeEEEEE
Q psy5399 65 KG-IHEIFCIAVND---------AFVMEAWCRKNNA-EGKIRFLADPN----LEFTKKLGVEHEIPVLGGWRSKRYSMVV 129 (156)
Q Consensus 65 ~~-~~~v~~is~d~---------~~~~~~~~~~~~~-~~~f~~~~D~~----~~~~~~~gv~~~~~~~~~~~~~~~~~ii 129 (156)
.. ++ ++.|.... ++.++.+..++++ .. ..++.|.. +.+.+.||+... .-+.+|+
T Consensus 543 ~~~~~-~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~g~~~~---------~g~~v~v 611 (639)
T 2dkh_A 543 DSIFD-LRAVFPQAYTEVALETLPALLLPPKGQLGMIDY-EKVFSPDLKNAGQDIFELRGIDRQ---------QGALVVV 611 (639)
T ss_dssp TSSEE-EEEECSSCGGGCCGGGSCGGGSCEETTTTEECC-CSEEECCCSSTTCCHHHHTTBCTT---------TCEEEEE
T ss_pred CceEE-EEEEecCCCCccchhhCcHhhCCcccccccccc-eeEEeCCCcccccchHHHhCCCCC---------ceEEEEE
Confidence 11 33 66664332 1112222222232 21 23567732 568889998421 1236888
Q ss_pred e-CCcEEEEEE
Q psy5399 130 D-DGKITQLNI 139 (156)
Q Consensus 130 d-~G~I~~~~~ 139 (156)
. ||-|-++.-
T Consensus 612 RPD~yv~~~~~ 622 (639)
T 2dkh_A 612 RPDQYVAQVLP 622 (639)
T ss_dssp CTTSBEEEEEC
T ss_pred CCCCceEEeec
Confidence 7 999988754
No 277
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=91.79 E-value=0.1 Score=33.90 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=32.1
Q ss_pred hhhHhCCCeEEEEEeeC----CCCCCCCcCChhhHHHhHHHHHHcCC-CEEEEEecC-CHHHHHHHHHHcCCCcceEEEe
Q psy5399 25 IADAIKGKKVIIFGVPG----AFTPGCSVTHLPGYLAKEKDLKAKGI-HEIFCIAVN-DAFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 25 l~~~~~gk~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~~-~~v~~is~d-~~~~~~~~~~~~~~~~~f~~~~ 98 (156)
+.++.+..+|+|+.- + +|||+|. . ...+ +.+.|+ + +-.+..+ +++..+.+.+..+... +|.+.
T Consensus 13 v~~~i~~~~Vvvfsk-~t~~~p~Cp~C~-~-ak~l------L~~~gv~~-~~~vdV~~d~~~~~~l~~~tg~~t-vP~vf 81 (118)
T 2wem_A 13 LDALVKKDKVVVFLK-GTPEQPQCGFSN-A-VVQI------LRLHGVRD-YAAYNVLDDPELRQGIKDYSNWPT-IPQVY 81 (118)
T ss_dssp HHHHHHHSSEEEEES-BCSSSBSSHHHH-H-HHHH------HHHTTCCC-CEEEESSSCHHHHHHHHHHHTCCS-SCEEE
T ss_pred HHHHhccCCEEEEEe-cCCCCCccHHHH-H-HHHH------HHHcCCCC-CEEEEcCCCHHHHHHHHHHhCCCC-cCeEE
Confidence 344445566777653 3 3888888 3 2322 233466 4 5555554 3444444444444432 77443
No 278
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=91.75 E-value=0.011 Score=38.02 Aligned_cols=14 Identities=21% Similarity=0.173 Sum_probs=10.2
Q ss_pred EEEEeeCCCCCCCCc
Q psy5399 35 IIFGVPGAFTPGCSV 49 (156)
Q Consensus 35 vl~f~~~~~cp~C~~ 49 (156)
|+.|+ .+|||+|..
T Consensus 21 vv~f~-~~~Cp~C~~ 34 (114)
T 2hze_A 21 VTIFV-KYTCPFCRN 34 (114)
T ss_dssp EEEEE-CTTCHHHHH
T ss_pred EEEEE-eCCChhHHH
Confidence 44444 899999994
No 279
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=91.75 E-value=0.17 Score=32.89 Aligned_cols=64 Identities=6% Similarity=-0.066 Sum_probs=44.6
Q ss_pred EEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec----CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 37 FGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV----NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 37 ~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
.+|..++|++|+. .. +.+.+.|+. +-.+.. .+.+.+++|....+.+ +.-+....+..++.++..
T Consensus 3 ~iY~~~~C~~c~k-a~-------~~L~~~gi~-~~~~di~~~~~~~~el~~~l~~~~~~--~~~l~n~~~~~~k~l~~~ 70 (120)
T 3l78_A 3 TLFLSPSCTSCRK-AR-------AWLNRHDVV-FQEHNIMTSPLSRDELLKILSYTENG--TEDIISTRSKVFQKLDID 70 (120)
T ss_dssp EEEECSSCHHHHH-HH-------HHHHHTTCC-EEEEETTTSCCCHHHHHHHHHHCSST--HHHHBCTTCHHHHHTTCC
T ss_pred EEEeCCCCHHHHH-HH-------HHHHHcCCC-eEEEecccCCCcHHHHHHHHhhcCCC--HHHhhcCCcHHHHHcCCC
Confidence 3455778999983 32 233556888 666654 3679999999988877 665566677888888764
No 280
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=91.64 E-value=0.097 Score=34.47 Aligned_cols=50 Identities=6% Similarity=0.157 Sum_probs=26.6
Q ss_pred eCCCCCCCCcCChhhHHHhHHHHHHcC---CCEEEEEecC--C--HHHHHHHHHHcCCCcceEEEe
Q psy5399 40 PGAFTPGCSVTHLPGYLAKEKDLKAKG---IHEIFCIAVN--D--AFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 40 ~~~~cp~C~~~~l~~l~~~~~~~~~~~---~~~v~~is~d--~--~~~~~~~~~~~~~~~~f~~~~ 98 (156)
..+|||+|. . + |..+ +.+.+ +. +-.+..+ + ++..++..+..+... +|.+.
T Consensus 43 ~~~~Cp~C~-~-a--~k~~---L~~~~~~~i~-~~~vdvd~~~~~~~~~~~L~~~~g~~t-VP~vf 99 (129)
T 3ctg_A 43 AKTYCPYCK-A-T--LSTL---FQELNVPKSK-ALVLELDEMSNGSEIQDALEEISGQKT-VPNVY 99 (129)
T ss_dssp ECTTCHHHH-H-H--HHHH---HTTSCCCGGG-EEEEEGGGSTTHHHHHHHHHHHHSCCS-SCEEE
T ss_pred ECCCCCchH-H-H--HHHH---HHhcCccCCC-cEEEEccccCCHHHHHHHHHHHhCCCC-CCEEE
Confidence 388999999 3 3 1222 23334 55 5555554 2 233445566666533 66554
No 281
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=90.80 E-value=0.66 Score=30.32 Aligned_cols=47 Identities=6% Similarity=-0.183 Sum_probs=30.8
Q ss_pred eeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC-CHHHHHHHHHHc
Q psy5399 39 VPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DAFVMEAWCRKN 88 (156)
Q Consensus 39 ~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~ 88 (156)
|..+.||+|.. -..-.+...-+.++|+. +--+.++ +++.-+.+.++.
T Consensus 5 Ytt~~c~~c~~--kk~c~~aK~lL~~kgV~-feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 5 YIASSSGSTAI--KKKQQDVLGFLEANKIG-FEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp EECTTCSCHHH--HHHHHHHHHHHHHTTCC-EEEEECTTCHHHHHHHHHHS
T ss_pred EecCCCCCccc--hHHHHHHHHHHHHCCCc-eEEEECCCCHHHHHHHHHhc
Confidence 34788999973 24444555556788999 8778776 455555566565
No 282
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=90.78 E-value=0.75 Score=29.95 Aligned_cols=57 Identities=12% Similarity=0.094 Sum_probs=43.2
Q ss_pred hhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 26 ADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 26 ~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.++|+|.||||.+= ... . . .++..+.+.+++.|+. ++||...+++.+++.+...|++
T Consensus 42 P~FF~~aPVVlDl~--~l~---~--~-~dl~~L~~~l~~~gl~-~vGV~g~~~~~~~~~a~~~GLp 98 (120)
T 3ghf_A 42 PAFLKHAPVVINVS--GLE---S--P-VNWPELHKIVTSTGLR-IIGVSGCKDASLKVEIDRMGLP 98 (120)
T ss_dssp HHHHTTCEEEEEEE--ECC---S--S-CCHHHHHHHHHTTTCE-EEEEESCCCHHHHHHHHHHTCC
T ss_pred hHhhCCCcEEEEcc--ccC---C--h-HHHHHHHHHHHHcCCE-EEEEeCCCcHHHHHHHHHCCCC
Confidence 34689999999973 211 1 2 4677778888888999 9999988777788888888766
No 283
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=90.37 E-value=0.28 Score=31.87 Aligned_cols=63 Identities=13% Similarity=0.166 Sum_probs=43.4
Q ss_pred EeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec----CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 38 GVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV----NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 38 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
+|..++|+.|+. .+ +.+++.|+. +-.+.. -+.+++++|.+..|.+ ..-+....+..++.++..
T Consensus 7 iY~~~~C~~c~k-a~-------~~L~~~gi~-~~~~di~~~~~~~~eL~~~l~~~g~~--~~~l~n~~~~~~k~l~l~ 73 (120)
T 3fz4_A 7 FYEYPKCSTCRR-AK-------AELDDLAWD-YDAIDIKKNPPAASLIRNWLENSGLE--LKKFFNTSGQSYRALGLK 73 (120)
T ss_dssp EEECSSCHHHHH-HH-------HHHHHHTCC-EEEEETTTSCCCHHHHHHHHHHSCCC--GGGGBCTTSHHHHHTTHH
T ss_pred EEeCCCChHHHH-HH-------HHHHHcCCc-eEEEEeccCchhHHHHHHHHHHcCCC--HHHHhCCCCcchhhcCcc
Confidence 444677999983 32 223455787 666644 3689999999999987 555566677888887763
No 284
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=89.86 E-value=0.34 Score=31.87 Aligned_cols=63 Identities=11% Similarity=0.015 Sum_probs=42.1
Q ss_pred EeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC----CHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 38 GVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN----DAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 38 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d----~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
+|..++||.|.. .. ..+.+.|+. +-.+..+ +.++++++.+..+.+ +.-+....+..++.++..
T Consensus 5 lY~~~~C~~C~k-a~-------~~L~~~gi~-y~~~di~~~~~~~~el~~~l~~~~~~--~~~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 5 LYTSPSCTSCRK-AR-------AWLEEHEIP-FVERNIFSEPLSIDEIKQILRMTEDG--TDEIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEECTTCHHHHH-HH-------HHHHHTTCC-EEEEETTTSCCCHHHHHHHHHTCSSC--GGGTBCTTSHHHHHHCCC
T ss_pred EEeCCCChHHHH-HH-------HHHHHcCCc-eEEEEccCCCccHHHHHHHHHHcCCC--HHHhhcCCchHHHhcCcc
Confidence 444788999983 32 223445788 6666543 458888998888776 555566677788887753
No 285
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=89.25 E-value=0.24 Score=32.19 Aligned_cols=63 Identities=13% Similarity=0.069 Sum_probs=43.4
Q ss_pred EeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec----CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 38 GVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV----NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 38 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
+|..++|+.|+. .. +.+.+.|+. +-.+.. -+.+++++|.+..|.+ ..-+....+..++.++..
T Consensus 8 iY~~p~C~~c~k-a~-------~~L~~~gi~-~~~~di~~~~~~~~eL~~~l~~~g~~--~~~l~n~~~~~~k~l~l~ 74 (120)
T 3gkx_A 8 FLQYPACSTCQK-AK-------KWLIENNIE-YTNRLIVDDNPTVEELKAWIPLSGLP--VKKFFNTSGVVYKELKLS 74 (120)
T ss_dssp EEECTTCHHHHH-HH-------HHHHHTTCC-CEEEETTTTCCCHHHHHHHHHHHTSC--GGGGBCTTSHHHHHTTHH
T ss_pred EEECCCChHHHH-HH-------HHHHHcCCc-eEEEecccCcCCHHHHHHHHHHcCCC--HHHeEeCCCchhhhcCcc
Confidence 444677999983 32 233456777 555543 3689999999999987 555566677888888754
No 286
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=88.97 E-value=0.056 Score=38.02 Aligned_cols=41 Identities=15% Similarity=0.126 Sum_probs=27.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhH---HHhHHHHHHcCCCEEEEEe
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGY---LAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~~~~v~~is 74 (156)
.++++|+.|+ ..+||+|..- -+.+ .++.+++.+ ++. ++-+.
T Consensus 20 ~~~~~vvef~-d~~Cp~C~~~-~~~l~~~~~l~~~~~~-~v~-~~~~~ 63 (191)
T 3l9s_A 20 AGEPQVLEFF-SFYCPHCYQF-EEVLHVSDNVKKKLPE-GTK-MTKYH 63 (191)
T ss_dssp CSSSCEEEEE-CTTCHHHHHH-HHTSCHHHHHHHHSCT-TCC-EEEEE
T ss_pred CCCCeEEEEE-CCCChhHHHh-ChhccchHHHHHhCCC-CcE-EEEEe
Confidence 4577777776 8899999954 3766 467777654 355 55443
No 287
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=87.47 E-value=0.6 Score=30.62 Aligned_cols=65 Identities=9% Similarity=0.016 Sum_probs=32.1
Q ss_pred hhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCC-EEEEEecC-CHHHHHHHHHH-cCCCcceEEEe
Q psy5399 26 ADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIH-EIFCIAVN-DAFVMEAWCRK-NNAEGKIRFLA 98 (156)
Q Consensus 26 ~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~-~v~~is~d-~~~~~~~~~~~-~~~~~~f~~~~ 98 (156)
.++.+.++|+|+. .+|||+|. . +..+-+. ....++. +++-|..+ +.++.++++++ .+... +|.+.
T Consensus 8 ~~ii~~~~Vvvys--k~~Cp~C~-~-ak~lL~~---~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~t-VP~If 75 (127)
T 3l4n_A 8 SLILDLSPIIIFS--KSTCSYSK-G-MKELLEN---EYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGT-VPNLL 75 (127)
T ss_dssp HHHHTSCSEEEEE--CTTCHHHH-H-HHHHHHH---HEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCS-SCEEE
T ss_pred HHHHccCCEEEEE--cCCCccHH-H-HHHHHHH---hcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCC-cceEE
Confidence 3444556666655 78999999 3 3333322 1111333 13444433 44555555543 45432 77443
No 288
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=86.44 E-value=2 Score=30.76 Aligned_cols=38 Identities=13% Similarity=0.292 Sum_probs=30.0
Q ss_pred eEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEcc
Q psy5399 94 IRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEP 141 (156)
Q Consensus 94 f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~ 141 (156)
+....|.+..++++||+.. .|+.++++ +|++.......
T Consensus 187 v~~~~~~~~~l~~~f~v~~----------~Pslvl~~~~g~~~~~~~~~ 225 (244)
T 3q6o_A 187 VRRVLNTEANVVRKFGVTD----------FPSCYLLFRNGSVSRVPVLM 225 (244)
T ss_dssp EEEEETTCHHHHHHHTCCC----------SSEEEEEETTSCEEECCCSS
T ss_pred EEEEeCchHHHHHHcCCCC----------CCeEEEEeCCCCeEeecccc
Confidence 7777787789999999952 45588888 99999887543
No 289
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=86.32 E-value=0.39 Score=31.26 Aligned_cols=63 Identities=11% Similarity=0.058 Sum_probs=42.5
Q ss_pred EeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec----CCHHHHHHHHHHcCC-CcceEEEecCCchhHHhhCCe
Q psy5399 38 GVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV----NDAFVMEAWCRKNNA-EGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 38 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~-~~~f~~~~D~~~~~~~~~gv~ 111 (156)
+|..++|+.|+. .. +.+++.|+. +-.+.. -+.+++++|.+..|+ + ..=+....+..++.++..
T Consensus 9 iY~~p~C~~c~k-a~-------~~L~~~gi~-~~~~di~~~~~~~~eL~~~l~~~g~~~--~~~l~n~~~~~~k~l~l~ 76 (121)
T 3rdw_A 9 IYHNPRCSKSRE-TL-------ALVEQQGIT-PQVVLYLETPPSVDKLKELLQQLGFSD--ARQLMRTKEDLYKTLNLD 76 (121)
T ss_dssp EECCTTCHHHHH-HH-------HHHHTTTCC-CEEECTTTSCCCHHHHHHHHHHTTCSS--GGGGBCTTSHHHHHTTTT
T ss_pred EEECCCCHHHHH-HH-------HHHHHcCCC-cEEEeeccCCCcHHHHHHHHHhcCCcC--HHHHhcCCChhhhhcCcc
Confidence 444677999983 32 333556777 655543 368999999999998 6 433455667888888764
No 290
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=85.86 E-value=0.36 Score=32.37 Aligned_cols=64 Identities=14% Similarity=0.058 Sum_probs=43.0
Q ss_pred EeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC----CHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCee
Q psy5399 38 GVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN----DAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEH 112 (156)
Q Consensus 38 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d----~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~ 112 (156)
+|..++|+.|+. .. +.+.+.|+. +-.+... +.+++++|....+++ ..-+....+..++.++...
T Consensus 6 iY~~p~C~~crk-ak-------~~L~~~gi~-~~~idi~~~~~~~~eL~~~~~~~g~p--~~~l~n~~~~~yk~l~l~~ 73 (141)
T 1s3c_A 6 IYHNPASGTSRN-TL-------EMIRNSGTE-PTIILYLENPPSRDELVKLIADMGIS--VRALLRKNVEPYEQLGLAE 73 (141)
T ss_dssp EECCTTCHHHHH-HH-------HHHHHTTCC-CEEECTTTSCCCHHHHHHHHHHHTSC--HHHHBCSSSHHHHHTTTTS
T ss_pred EEECCCChHHHH-HH-------HHHHHcCCC-EEEEECCCCCccHHHHHHHhcccCCC--HHHhccCCchhHHhcCCcc
Confidence 454678999983 32 234556787 6666543 578899999999887 5544556777888877643
No 291
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=85.86 E-value=0.08 Score=36.18 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=24.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA 64 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~ 64 (156)
.++++|+-|+ ...||+|..-+ +.+.++.+++.+
T Consensus 20 ~~~~~vvEf~-dy~Cp~C~~~~-~~~~~l~~~~~~ 52 (184)
T 4dvc_A 20 SSSPVVSEFF-SFYCPHCNTFE-PIIAQLKQQLPE 52 (184)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHH-HHHHHHHHTSCT
T ss_pred CCCCEEEEEE-CCCCHhHHHHh-HHHHHHHhhcCC
Confidence 4677777777 67799999654 777777777654
No 292
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=85.57 E-value=5.4 Score=31.99 Aligned_cols=95 Identities=16% Similarity=0.235 Sum_probs=60.8
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHH-HHHcCCCEEEEEecCCHHHH
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKD-LKAKGIHEIFCIAVNDAFVM 81 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~-~~~~~~~~v~~is~d~~~~~ 81 (156)
..+|..+|+.-|. .+|+.+++-|++....++|. +.. . ........+ -.+.++. +-.+.....
T Consensus 420 ~~pG~r~p~~~l~--~~~~~~~~~dl~g~~f~ll~-~~~---------~-~~~~~~~~~~~~~~~~~-~~~~~~~~~--- 482 (535)
T 3ihg_A 420 GRPGFRGPHVLVS--RHGERLSTVDLFGDGWTLLA-GEL---------G-ADWVAAAEAVSAELGVP-VRAYRVGAG--- 482 (535)
T ss_dssp CCTTSBCCCCEEE--ETTEEEEGGGGCSSSEEEEE-CTT---------C-HHHHHHHHHHHHHHTCC-EEEEEBTTT---
T ss_pred CCCCCcCCCceee--cCCceeeHHHhcCCceEEEe-cCC---------c-cHHHHHHHHHHHhcCCc-eEEEEeCCc---
Confidence 4689999999885 46888999997744445554 211 1 222332222 1334666 544544321
Q ss_pred HHHHHHcCCCcceEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEc
Q psy5399 82 EAWCRKNNAEGKIRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIE 140 (156)
Q Consensus 82 ~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~ 140 (156)
+.|.++.+++.||+.. .. .+||. ||-|.+..-.
T Consensus 483 ---------------~~d~~~~~~~~~~~~~--------~~---~~lvRPD~~va~r~~~ 516 (535)
T 3ihg_A 483 ---------------LTDPESAVSERYGIGK--------AG---ASLVRPDGIVAWRTDE 516 (535)
T ss_dssp ---------------BBCSSCCHHHHHTCTT--------TC---EEEECTTSBEEEEESS
T ss_pred ---------------cccCcchHHHHhCCCC--------Cc---eEeeCCCceeEEecCC
Confidence 3678889999999853 12 68897 9999999754
No 293
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=84.14 E-value=0.31 Score=36.49 Aligned_cols=38 Identities=13% Similarity=0.293 Sum_probs=24.2
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEe
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is 74 (156)
|+.+|+.|+ ...||||+.. .+.+.+..+ +..+. ++.+.
T Consensus 147 gk~~I~vFt-Dp~CPYCkkl-~~~l~~~l~---~~~Vr-~i~~P 184 (273)
T 3tdg_A 147 KDKILYIVS-DPMCPHCQKE-LTKLRDHLK---ENTVR-MVVVG 184 (273)
T ss_dssp TTCEEEEEE-CTTCHHHHHH-HHTHHHHHH---HCEEE-EEECC
T ss_pred CCeEEEEEE-CcCChhHHHH-HHHHHHHhh---CCcEE-EEEee
Confidence 455666665 8889999954 577776554 33444 55443
No 294
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=82.91 E-value=2.2 Score=31.72 Aligned_cols=53 Identities=6% Similarity=-0.052 Sum_probs=30.5
Q ss_pred EEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC--C-------------HHHHHHHHHHcCCC
Q psy5399 34 VIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN--D-------------AFVMEAWCRKNNAE 91 (156)
Q Consensus 34 vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d--~-------------~~~~~~~~~~~~~~ 91 (156)
+.|..|...+||+|.. .-..|.++..+ .++. .+.+..+ + .+.++.+.++++..
T Consensus 44 ~~VelyTs~gCp~C~~-Ak~lL~~~~~~---~~vi-~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~ 111 (270)
T 2axo_A 44 GVVELFTSQGCASCPP-ADEALRKMIQK---GDVV-GLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRN 111 (270)
T ss_dssp CEEEEEECTTCTTCHH-HHHHHHHHHHH---TSSE-EEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCS
T ss_pred cEEEEEeCCCCCChHH-HHHHHHHhhcc---CCee-eEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCC
Confidence 6666677999999994 44444455433 3442 3344422 2 34455677777753
No 295
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=82.62 E-value=0.45 Score=34.21 Aligned_cols=8 Identities=25% Similarity=0.355 Sum_probs=4.1
Q ss_pred CCCCCCCC
Q psy5399 41 GAFTPGCS 48 (156)
Q Consensus 41 ~~~cp~C~ 48 (156)
..|||+|.
T Consensus 177 ~~~Cp~C~ 184 (241)
T 1nm3_A 177 KPGCPFCA 184 (241)
T ss_dssp CSSCHHHH
T ss_pred CCCChHHH
Confidence 44555555
No 296
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=82.50 E-value=0.19 Score=34.62 Aligned_cols=40 Identities=13% Similarity=-0.017 Sum_probs=27.2
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhH-HHhHHHHHHcCCCEEEEEe
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGY-LAKEKDLKAKGIHEIFCIA 74 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l-~~~~~~~~~~~~~~v~~is 74 (156)
+++++|.|| ...||+|... .+.+ .++.+++.. .+. +..+.
T Consensus 17 ~~~~~ief~-d~~CP~C~~~-~~~l~~~l~~~~~~-~v~-~~~~~ 57 (195)
T 3c7m_A 17 ADKTLIKVF-SYACPFCYKY-DKAVTGPVSEKVKD-IVA-FTPFH 57 (195)
T ss_dssp CTTEEEEEE-CTTCHHHHHH-HHHTHHHHHHHTTT-TCE-EEEEE
T ss_pred CCcEEEEEE-eCcCcchhhC-cHHHHHHHHHhCCC-ceE-EEEEe
Confidence 455777776 6899999964 5888 777776642 355 55554
No 297
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=82.21 E-value=1.3 Score=28.21 Aligned_cols=60 Identities=10% Similarity=-0.011 Sum_probs=37.2
Q ss_pred EeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC----CHHHHHHHHHHcCCCcceEEEecCCchhHHhhCC
Q psy5399 38 GVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN----DAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGV 110 (156)
Q Consensus 38 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d----~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv 110 (156)
+|..++||+|. ... +.+.+.|+. +-.+... +.+++++|.++.|+. -+....+..++.+|.
T Consensus 4 iY~~~~C~~C~-kak-------~~L~~~gi~-~~~~di~~~~~~~~~l~~~~~~~g~~----~l~n~~~~~~k~l~~ 67 (114)
T 1rw1_A 4 LYGIKACDTMK-KAR-------TWLDEHKVA-YDFHDYKAVGIDREHLRRWCAEHGWQ----TVLNRAGTTFRKLDE 67 (114)
T ss_dssp EEECSSCHHHH-HHH-------HHHHHTTCC-EEEEEHHHHCCCHHHHHHHHHHHCHH----HHBCTTSHHHHTSCH
T ss_pred EEECCCChHHH-HHH-------HHHHHCCCc-eEEEeecCCCCCHHHHHHHHHhCChH----HhccCCcHhHHhcCc
Confidence 44477899998 332 223456888 6666543 458889999887731 223345666666654
No 298
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=81.88 E-value=0.81 Score=21.88 Aligned_cols=21 Identities=14% Similarity=0.271 Sum_probs=17.8
Q ss_pred CCCCCCcCChhhHHHhHHHHHH
Q psy5399 43 FTPGCSVTHLPGYLAKEKDLKA 64 (156)
Q Consensus 43 ~cp~C~~~~l~~l~~~~~~~~~ 64 (156)
-||.|..+ +|..+.+..-|.+
T Consensus 5 ~CpvCk~q-~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQ-APDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCE-ESSHHHHHHHHHH
T ss_pred cCcccccc-CcChHHHHHHHHH
Confidence 39999975 8999999888875
No 299
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=80.10 E-value=0.19 Score=33.93 Aligned_cols=26 Identities=15% Similarity=0.055 Sum_probs=16.7
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHh
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAK 58 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~ 58 (156)
++.+|+.|. ..+||+|... .+.+.++
T Consensus 14 a~~~vv~f~-D~~Cp~C~~~-~~~l~~l 39 (147)
T 3gv1_A 14 GKLKVAVFS-DPDCPFCKRL-EHEFEKM 39 (147)
T ss_dssp CCEEEEEEE-CTTCHHHHHH-HHHHTTC
T ss_pred CCEEEEEEE-CCCChhHHHH-HHHHhhc
Confidence 454555554 8899999953 4665543
No 300
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.35 E-value=1.2 Score=30.98 Aligned_cols=56 Identities=5% Similarity=-0.097 Sum_probs=31.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhH--HHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHc
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGY--LAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKN 88 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l--~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~ 88 (156)
.+|+++|++. ..||+.|..- .... .+...++=+.++. +++.+.++.+..+.+....
T Consensus 54 e~K~LlVyLh-s~~~~~~~~f-~~~~L~~~~V~~~l~~nfV-~w~~dv~~~e~~~~~~~~~ 111 (178)
T 2ec4_A 54 DRKLLAIYLH-HDESVLTNVF-CSQMLCAESIVSYLSQNFI-TWAWDLTKDSNRARFLTMC 111 (178)
T ss_dssp TCCEEEEEEE-CSSCSHHHHH-HHHTTTCHHHHHHHHHTEE-EEEEECCSHHHHHHHHHHH
T ss_pred hCcEEEEEEe-CCCCccHHHH-HHHhcCCHHHHHHHHcCEE-EEEEeCCCchhhhhhhhhh
Confidence 5788888887 8899987621 1111 1222233233555 6677777777555444433
No 301
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=76.19 E-value=2.4 Score=27.21 Aligned_cols=60 Identities=15% Similarity=-0.073 Sum_probs=37.2
Q ss_pred EeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec----CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCC
Q psy5399 38 GVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV----NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGV 110 (156)
Q Consensus 38 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv 110 (156)
+|..++|+.|. ... +.+.+.|+. +-.+.. -+.++++++.++.|+. -+....+..++.+|.
T Consensus 9 iY~~~~C~~C~-ka~-------~~L~~~gi~-y~~~di~~~~~~~~~l~~~~~~~g~~----~l~n~~~~~~k~l~~ 72 (120)
T 2kok_A 9 IYGIKNCDTMK-KAR-------IWLEDHGID-YTFHDYKKEGLDAETLDRFLKTVPWE----QLLNRAGTTFRKLPE 72 (120)
T ss_dssp EEECSSCHHHH-HHH-------HHHHHHTCC-EEEEEHHHHCCCHHHHHHHHHHSCGG----GTBCSSSHHHHHSCH
T ss_pred EEECCCChHHH-HHH-------HHHHHcCCc-EEEEeeeCCCCCHHHHHHHHHHcChH----hhccCCchhhHhcCc
Confidence 34467899998 332 223345787 655654 2458888999887742 223455677777764
No 302
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=71.03 E-value=0.67 Score=32.19 Aligned_cols=29 Identities=3% Similarity=-0.270 Sum_probs=20.9
Q ss_pred eEEEEEeeCCCCCCCCcCChhhHHHhHHHH
Q psy5399 33 KVIIFGVPGAFTPGCSVTHLPGYLAKEKDL 62 (156)
Q Consensus 33 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~ 62 (156)
++.|..|....||+|..- -+.+.+..+++
T Consensus 15 ~vtiv~f~D~~Cp~C~~~-~~~~~~~l~~~ 43 (182)
T 3gn3_A 15 PRLFEVFLEPTCPFSVKA-FFKLDDLLAQA 43 (182)
T ss_dssp SEEEEEEECTTCHHHHHH-HTTHHHHHHHH
T ss_pred CEEEEEEECCCCHhHHHH-HHHHHHHHHHh
Confidence 455555557789999953 48888877776
No 303
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=71.02 E-value=2.2 Score=34.63 Aligned_cols=39 Identities=13% Similarity=0.324 Sum_probs=30.7
Q ss_pred eEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEe-CCcEEEEEEccC
Q psy5399 94 IRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DGKITQLNIEPD 142 (156)
Q Consensus 94 f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G~I~~~~~~~~ 142 (156)
+.++.|.+..+.++|||.. .|+.++++ +|++..+.+..+
T Consensus 187 v~~v~~~~~~l~~kfgV~~----------~Pslvl~~~nGk~~~~~v~~~ 226 (519)
T 3t58_A 187 VRRVLNTESDLVNKFGVTD----------FPSCYLLLRNGSVSRVPVLVE 226 (519)
T ss_dssp EEEEETTCHHHHHHHTCCC----------SSEEEEEETTSCEEECCCSSC
T ss_pred EEEecCchHHHHHHcCCCC----------CCeEEEEeCCCceeecccccc
Confidence 8888888899999999952 45588888 999887765443
No 304
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=70.70 E-value=3.4 Score=29.23 Aligned_cols=33 Identities=9% Similarity=0.127 Sum_probs=18.8
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHH
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKA 64 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~ 64 (156)
+.+.++++|-..||+.|.. .++.+.+.+++|+.
T Consensus 130 ~~~~~~l~f~~~~~~~~~~-~~~~~~~vAk~~k~ 162 (227)
T 4f9z_D 130 VIQIHLLLIMNKASPEYEE-NMHRYQKAAKLFQG 162 (227)
T ss_dssp SCCEEEEEEECTTSTTHHH-HHHHHHHHHHHTTT
T ss_pred CCceEEEEEEcCCcchHHH-HHHHHHHHHHHhhC
Confidence 3345544443556776663 35667676666653
No 305
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=70.20 E-value=3.6 Score=26.58 Aligned_cols=64 Identities=19% Similarity=0.220 Sum_probs=29.9
Q ss_pred hhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCC-CEEEEEecC-CHHHHHHHHHHcCCCcceE
Q psy5399 25 IADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGI-HEIFCIAVN-DAFVMEAWCRKNNAEGKIR 95 (156)
Q Consensus 25 l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~-~~v~~is~d-~~~~~~~~~~~~~~~~~f~ 95 (156)
+.++.+.++|||+-=....||+|.. .....++ +.+.|+ . +..+..+ +++..+...+..+.+ .+|
T Consensus 13 i~~~i~~~~VvvF~Kgt~~~P~C~f--c~~ak~l---L~~~gv~~-~~~~~v~~~~~~r~~l~~~sg~~-TvP 78 (118)
T 2wul_A 13 LDALVKKDKVVVFLKGTPEQPQCGF--SNAVVQI---LRLHGVRD-YAAYNVLDDPELRQGIKDYSNWP-TIP 78 (118)
T ss_dssp HHHHHHHSSEEEEESBCSSSBSSHH--HHHHHHH---HHHTTCCS-CEEEETTSCHHHHHHHHHHHTCC-SSC
T ss_pred HHHHHhcCCEEEEEcCCCCCCCCHH--HHHHHHH---HHHhCCcC-eEeecccCCHHHHHHHHHhccCC-CCC
Confidence 3444455677777542223444441 1222233 344566 4 5556654 444444444444543 277
No 306
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=67.72 E-value=6 Score=32.99 Aligned_cols=122 Identities=18% Similarity=0.129 Sum_probs=67.6
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhC--CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHH----------H------
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIK--GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLK----------A------ 64 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~--gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~----------~------ 64 (156)
+.+|..+|++.+....+|++++|.+++. |+++||.|- +.-.. . .....+.++.+.+. .
T Consensus 479 ~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~-~~~~~--~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 554 (665)
T 1pn0_A 479 CVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFA-GKATD--A-TQMSRIKKFAAYLDSENSVISRYTPKGADRN 554 (665)
T ss_dssp SCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEE-ECTTS--H-HHHHHHHHHHHHHHSTTSHHHHHSBTTSCTT
T ss_pred CCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEec-CCccc--c-hhHHHHHHHHHHhhccccHHhhcCCcccCcc
Confidence 4689999999997335899999999774 678888874 32110 0 01233444444442 1
Q ss_pred cCCCEEEEEecCCHHH--HHHHHH-Hc--CCCcceEEEecC------CchhHHhhCCeeeccCCCcceeeeEEEEEe-CC
Q psy5399 65 KGIHEIFCIAVNDAFV--MEAWCR-KN--NAEGKIRFLADP------NLEFTKKLGVEHEIPVLGGWRSKRYSMVVD-DG 132 (156)
Q Consensus 65 ~~~~~v~~is~d~~~~--~~~~~~-~~--~~~~~f~~~~D~------~~~~~~~~gv~~~~~~~~~~~~~~~~~iid-~G 132 (156)
.-++ ++.|....... +..+-. .. +... ..++.|. ++.+++.||+... .-+.+|+. ||
T Consensus 555 ~~~~-~~~i~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~g~~~~---------~g~~vlvRPD~ 623 (665)
T 1pn0_A 555 SRID-VITIHSCHRDDIEMHDFPAPALHPKWQY-DFIYADCDSWHHPHPKSYQAWGVDET---------KGAVVVVRPDG 623 (665)
T ss_dssp SSEE-EEEEESSCTTSCCGGGSCTTTTSCTTCC-SSEEECSCCSSSCCCCHHHHHTBCTT---------TCEEEEECTTS
T ss_pred ceeE-EEEEecCCCCccchhhCCHHHcCcccch-heEeecCcccccccccHHHHcCCCCC---------CceEEEECCCC
Confidence 1144 66664332111 001000 00 1121 2356673 4679999998421 12368887 99
Q ss_pred cEEEEEE
Q psy5399 133 KITQLNI 139 (156)
Q Consensus 133 ~I~~~~~ 139 (156)
-|-++.-
T Consensus 624 yV~~~~~ 630 (665)
T 1pn0_A 624 YTSLVTD 630 (665)
T ss_dssp BEEEEEC
T ss_pred cEEEEec
Confidence 9998754
No 307
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=66.43 E-value=0.82 Score=31.34 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=23.6
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHH-HhHHHHHHc-CCCEEEEE
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYL-AKEKDLKAK-GIHEIFCI 73 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~-~~~~~~~~~-~~~~v~~i 73 (156)
++..|+.|+ ...||+|..- -+.+. .+.++|.+. ++. ++..
T Consensus 11 a~~~i~~f~-D~~Cp~C~~~-~~~l~~~l~~~~~~~~~v~-~~~~ 52 (186)
T 3bci_A 11 GKPLVVVYG-DYKCPYCKEL-DEKVMPKLRKNYIDNHKVE-YQFV 52 (186)
T ss_dssp CCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTSSE-EEEE
T ss_pred CCeEEEEEE-CCCChhHHHH-HHHHHHHHHHHhccCCeEE-EEEE
Confidence 444454444 7789999954 46664 455666543 355 5543
No 308
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=65.86 E-value=20 Score=22.80 Aligned_cols=62 Identities=21% Similarity=0.138 Sum_probs=30.1
Q ss_pred hHhCCCeEEEEEeeC---CCCCCCCcCChhhHHHhHHHHHHcCCC--EEEEEecC-CHHHHHHHHHHcCCCcceEEE
Q psy5399 27 DAIKGKKVIIFGVPG---AFTPGCSVTHLPGYLAKEKDLKAKGIH--EIFCIAVN-DAFVMEAWCRKNNAEGKIRFL 97 (156)
Q Consensus 27 ~~~~gk~vvl~f~~~---~~cp~C~~~~l~~l~~~~~~~~~~~~~--~v~~is~d-~~~~~~~~~~~~~~~~~f~~~ 97 (156)
++.+..+|+|+.-.. +|||+|. . ...+- +++ |+. .+..+..+ +++..+.+.+..+..- +|.+
T Consensus 11 ~~i~~~~Vvvfsk~t~~~p~Cp~C~-~-ak~lL---~~~---gv~~~~~~~~dv~~~~~~~~~l~~~sg~~t-vP~v 78 (121)
T 3gx8_A 11 DAIESAPVVLFMKGTPEFPKCGFSR-A-TIGLL---GNQ---GVDPAKFAAYNVLEDPELREGIKEFSEWPT-IPQL 78 (121)
T ss_dssp HHHHSCSEEEEESBCSSSBCTTHHH-H-HHHHH---HHH---TBCGGGEEEEECTTCHHHHHHHHHHHTCCS-SCEE
T ss_pred HHhccCCEEEEEeccCCCCCCccHH-H-HHHHH---HHc---CCCcceEEEEEecCCHHHHHHHHHHhCCCC-CCeE
Confidence 334556677776421 3788888 3 23332 222 442 03334443 4444455555555433 7744
No 309
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=65.60 E-value=3.8 Score=28.46 Aligned_cols=37 Identities=5% Similarity=0.031 Sum_probs=22.7
Q ss_pred EEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEE
Q psy5399 34 VIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCI 73 (156)
Q Consensus 34 vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~i 73 (156)
+.|.+|...-||+|-. ..+.+.++.+ +.+.++. |.-.
T Consensus 8 ~~I~~f~D~~CP~C~~-~~~~~~~l~~-~~~~~v~-v~~~ 44 (216)
T 2in3_A 8 PVLWYIADPMCSWCWG-FAPVIENIRQ-EYSAFLT-VKIM 44 (216)
T ss_dssp CEEEEEECTTCHHHHH-HHHHHHHHHH-HHTTTCE-EEEE
T ss_pred eeEEEEECCCCchhhc-chHHHHHHHh-cCCCCeE-EEEe
Confidence 3445555778999994 3466666665 5444566 5443
No 310
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=65.58 E-value=1.5 Score=20.29 Aligned_cols=12 Identities=25% Similarity=0.564 Sum_probs=8.9
Q ss_pred CCCCCCcCChhhH
Q psy5399 43 FTPGCSVTHLPGY 55 (156)
Q Consensus 43 ~cp~C~~~~l~~l 55 (156)
-||.|+ +.||.-
T Consensus 8 qcpvcq-q~mpaa 19 (29)
T 3vhs_A 8 QCPVCQ-QMMPAA 19 (29)
T ss_dssp ECTTTC-CEEEGG
T ss_pred eChHHH-HhCcHH
Confidence 499999 567753
No 311
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=63.83 E-value=3.8 Score=26.29 Aligned_cols=66 Identities=12% Similarity=0.005 Sum_probs=41.3
Q ss_pred EEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec----CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCee
Q psy5399 37 FGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV----NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVEH 112 (156)
Q Consensus 37 ~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~~ 112 (156)
.+|..+.|+.|+. .. +.+++.|+. +-.+.. -+.+++++|.+..|++..-.+ ....+..++.++...
T Consensus 7 ~iY~~p~C~~c~k-a~-------~~L~~~gi~-~~~~di~~~~~t~~eL~~~l~~~g~~~~~~l-~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 7 VIYHNPKCSKSRE-TL-------ALLENQGIA-PQVIKYLETSPSVEELKRLYQQLGLNEVRAM-MRCKEELYKELNLGD 76 (119)
T ss_dssp EEECCTTCHHHHH-HH-------HHHHHTTCC-CEEECHHHHCCCHHHHHHHHHHHTCSSGGGG-BCTTSHHHHHTTTTC
T ss_pred EEEECCCChHHHH-HH-------HHHHHcCCc-eEEEEeccCcCcHHHHHHHHHHcCCccHHHH-hcCCCchhhhcCccc
Confidence 3444667998883 32 223456777 555533 478999999999986510223 445677778877643
No 312
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=61.03 E-value=17 Score=24.21 Aligned_cols=41 Identities=15% Similarity=0.145 Sum_probs=27.1
Q ss_pred eEEEecCCchhHHhhCCeeeccCCCcceeeeEEEEEeCCcEEEEE
Q psy5399 94 IRFLADPNLEFTKKLGVEHEIPVLGGWRSKRYSMVVDDGKITQLN 138 (156)
Q Consensus 94 f~~~~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~iid~G~I~~~~ 138 (156)
.+++...|.....+..-+. .+.+|+.|+.-|++||++++..
T Consensus 82 vTVFAGqDkEAt~~aR~yf----~~~pPSSPS~ALfKdGelVh~i 122 (147)
T 3fhk_A 82 VTVFAGQDKEATAKMREYF----TGAAPSSPSMALLKGKEVVHFI 122 (147)
T ss_dssp EEEETTTSHHHHHHHHTTS----TTCCCCSSEEEEEETTEEEEEE
T ss_pred EEeccCCCHHHHHHHHHhc----CCCCCCCchheeeeCCEEEEEe
Confidence 6677666643333322211 2567889999999999999984
No 313
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=58.08 E-value=5.8 Score=32.33 Aligned_cols=56 Identities=18% Similarity=0.296 Sum_probs=28.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC---C-HHHHHHHHHHcCCCcceEEE
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN---D-AFVMEAWCRKNNAEGKIRFL 97 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d---~-~~~~~~~~~~~~~~~~f~~~ 97 (156)
+.+.++|+. .+|||+|. . +..+-+ +.++. .-.+..+ + ++..+++.+..+... +|.+
T Consensus 16 ~~~~v~vy~--~~~Cp~C~-~-~k~~L~------~~~i~-~~~~dv~~~~~~~~~~~~l~~~~g~~t-vP~v 75 (598)
T 2x8g_A 16 DSAAVILFS--KTTCPYCK-K-VKDVLA------EAKIK-HATIELDQLSNGSAIQKCLASFSKIET-VPQM 75 (598)
T ss_dssp HHCSEEEEE--CTTCHHHH-H-HHHHHH------HTTCC-CEEEEGGGSTTHHHHHHHTHHHHSCCC-SCEE
T ss_pred ccCCEEEEE--CCCChhHH-H-HHHHHH------HCCCC-cEEEEcccCcchHHHHHHHHHHhCCce-eCEE
Confidence 344555554 77999999 3 344433 33555 4444443 2 333344444445433 7744
No 314
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=57.67 E-value=2.5 Score=29.80 Aligned_cols=38 Identities=13% Similarity=0.076 Sum_probs=22.1
Q ss_pred eeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHH-HH
Q psy5399 22 KIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEK-DL 62 (156)
Q Consensus 22 ~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~-~~ 62 (156)
...+++ -.++ +.|+.|...-||+|..- -+.+....+ +|
T Consensus 7 ~~~~G~-~~a~-vtivef~D~~Cp~C~~~-~~~~~~~l~~~~ 45 (205)
T 3gmf_A 7 HHLLGN-PAAK-LRLVEFVSYTCPHCSHF-EIESEGQLKIGM 45 (205)
T ss_dssp EEEESC-TTCS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHT
T ss_pred CceecC-CCCC-eEEEEEECCCCHHHHHH-HHHHHHHHHHHh
Confidence 344555 2344 44444447779999954 366655554 56
No 315
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=54.54 E-value=8 Score=31.59 Aligned_cols=35 Identities=9% Similarity=0.166 Sum_probs=28.2
Q ss_pred ccCCCcCCcceecccCCCceeehhhHhC-CCeEEEEE
Q psy5399 3 AQVGDTLPDALLHENTPQTKIQIADAIK-GKKVIIFG 38 (156)
Q Consensus 3 l~~G~~~P~f~l~~~~~g~~~~l~~~~~-gk~vvl~f 38 (156)
+.+|..+|++.+. ..+|.+..|.++++ |++++|.|
T Consensus 445 ~~~G~r~pd~~l~-~~~g~~~~l~~~l~~~~~~ll~~ 480 (570)
T 3fmw_A 445 PWPGRFAGGLVLS-RPSGEPVPVAELLRSARPLLLDL 480 (570)
T ss_dssp SSTTCBCTTCEEC-CSTTCCEEHHHHSTTCCCEEECS
T ss_pred ccccCcCCCceee-cCCCcceeHHHHhcCCeEEEEEe
Confidence 3579999999998 67888789999776 46777776
No 316
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=53.75 E-value=8.9 Score=23.42 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=25.5
Q ss_pred CCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHH
Q psy5399 18 TPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYL 56 (156)
Q Consensus 18 ~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~ 56 (156)
.||+.+.|-+ +++..+.|.+- |+ |..|... .-.+.
T Consensus 25 ~dGGdvelv~-v~~g~V~V~L~-Ga-C~gCpss-~~TLk 59 (88)
T 1xhj_A 25 RDGGDCTLVD-VEDGIVKLQLH-GA-CGTCPSS-TITLK 59 (88)
T ss_dssp HHSCEEEEEE-CCSSEEEEEEE-SS-CCSSCHH-HHHHH
T ss_pred hcCCeEEEEE-EECCEEEEEEe-ec-CCCCcch-HHHHH
Confidence 5899999999 68776777764 65 8899853 34555
No 317
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=52.15 E-value=6.2 Score=25.36 Aligned_cols=66 Identities=15% Similarity=0.213 Sum_probs=42.4
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhh--HH----HhHHHH-HH-c-CCCEEEEEecCCHHHHHHHHHHcCCCcceEEEec
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPG--YL----AKEKDL-KA-K-GIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLAD 99 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~--l~----~~~~~~-~~-~-~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D 99 (156)
++|..++|.-.++.+|+.|-. .+-. .. +...++ +. . +.- +++.++++.++.+++
T Consensus 24 ~kg~~~~v~~v~~~~C~~CGE-~~~d~e~~~~~~~~~~e~~r~~~~~~~--------~~~~l~~~R~~~gls-------- 86 (133)
T 3o9x_A 24 FRGRKTVLKGIHGLYCVHCEE-SIMNKEESDAFMAQVKAFRASVNAETV--------APEFIVKVRKKLSLT-------- 86 (133)
T ss_dssp ETTEEEEEEEEEEEEESSSSC-EECCHHHHHHHHHHHHHHHHHHHTTTC--------CHHHHHHHHHHTTCC--------
T ss_pred ECCEEEEECCCceeECCCCCC-EeecHHHHHHHHHHHHHHHHHHhhcCC--------CHHHHHHHHHHcCCC--------
Confidence 688777776667889999973 2221 11 111222 11 1 222 678899999999987
Q ss_pred CCchhHHhhCCee
Q psy5399 100 PNLEFTKKLGVEH 112 (156)
Q Consensus 100 ~~~~~~~~~gv~~ 112 (156)
...+|+.+|+..
T Consensus 87 -q~~la~~~g~s~ 98 (133)
T 3o9x_A 87 -QKEASEIFGGGV 98 (133)
T ss_dssp -HHHHHHHHCSCT
T ss_pred -HHHHHHHHCCCH
Confidence 467889888864
No 318
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=51.05 E-value=2.4 Score=29.68 Aligned_cols=41 Identities=15% Similarity=0.202 Sum_probs=22.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHH-HhHHHHHHc-CCCEEEEE
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYL-AKEKDLKAK-GIHEIFCI 73 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~-~~~~~~~~~-~~~~v~~i 73 (156)
.++.+|+.|+ ...||+|..-+ +.+. .+.++|.+. .+. ++-.
T Consensus 28 ~a~vtvvef~-D~~CP~C~~~~-~~~~~~l~~~~~~~g~v~-~~~~ 70 (202)
T 3gha_A 28 DAPVTVVEFG-DYKCPSCKVFN-SDIFPKIQKDFIDKGDVK-FSFV 70 (202)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHH-HHTHHHHHHHTTTTTSEE-EEEE
T ss_pred CCCEEEEEEE-CCCChhHHHHH-HHhhHHHHHHhccCCeEE-EEEE
Confidence 4454555554 77799999532 5553 344455432 344 4433
No 319
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=50.29 E-value=3.6 Score=29.47 Aligned_cols=40 Identities=15% Similarity=0.078 Sum_probs=23.5
Q ss_pred eeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhH-HHhHHHHHH
Q psy5399 22 KIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGY-LAKEKDLKA 64 (156)
Q Consensus 22 ~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l-~~~~~~~~~ 64 (156)
...+++ -.++.+|+.|+ ...||+|..-+ +.+ .++.++|.+
T Consensus 31 ~~~~G~-~~A~vtIvef~-Dy~CP~C~~~~-~~~~~~l~~~~~~ 71 (226)
T 3f4s_A 31 DKLLGD-PKAPILMIEYA-SLTCYHCSLFH-RNVFPKIKEKYID 71 (226)
T ss_dssp CCEESC-TTCSEEEEEEE-CTTCHHHHHHH-HHTHHHHHHHHTT
T ss_pred CCccCC-CCCCEEEEEEE-CCCCHHHHHHH-HHHHHHHHHHccc
Confidence 345555 23444455554 77799999543 544 566667743
No 320
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=49.82 E-value=12 Score=23.24 Aligned_cols=27 Identities=7% Similarity=0.021 Sum_probs=21.0
Q ss_pred EEEEeCCcEEEEEEccCCCceeecchh
Q psy5399 126 SMVVDDGKITQLNIEPDGTGLTCSLVD 152 (156)
Q Consensus 126 ~~iid~G~I~~~~~~~~~~~~~~~~~~ 152 (156)
.||+|.|..+|+|.+..........+.
T Consensus 31 ~FILd~g~~iyvW~G~~s~~~Ek~~A~ 57 (104)
T 1kcq_A 31 CFILDLGNNIHQWCGSNSNRYERLKAT 57 (104)
T ss_dssp EEEEECSSEEEEEECTTCCHHHHHHHH
T ss_pred eEEEeCCCEEEEEeCCCCCHHHHHHHH
Confidence 799998889999999887765544443
No 321
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=49.79 E-value=16 Score=27.66 Aligned_cols=36 Identities=14% Similarity=0.239 Sum_probs=32.6
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHc
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKN 88 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~ 88 (156)
.|...++.+.+++.|++ ++.||....+-++.|+++.
T Consensus 145 ~~~~~~l~~~l~~~G~~-v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 145 FSGQRELYNKLMENGIE-VYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CHHHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHTCG
T ss_pred CHHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhhc
Confidence 37888999999999999 9999999999999999874
No 322
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=49.35 E-value=25 Score=23.27 Aligned_cols=45 Identities=18% Similarity=0.232 Sum_probs=34.2
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCC---HHHHHHHHHHcCCCcceEEEec
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVND---AFVMEAWCRKNNAEGKIRFLAD 99 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~---~~~~~~~~~~~~~~~~f~~~~D 99 (156)
.|...+..+++++.|.. |+.+|.-+ ......|+++++++ +++++.
T Consensus 26 ~~~~~~al~~l~~~G~~-iii~TgR~~~~~~~~~~~l~~~gi~--~~~I~~ 73 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHR-LILWSVREGELLDEAIEWCRARGLE--FYAANK 73 (142)
T ss_dssp CTTHHHHHHHHHHTTCE-EEECCSCCHHHHHHHHHHHHTTTCC--CSEESS
T ss_pred CHHHHHHHHHHHHCCCE-EEEEeCCCcccHHHHHHHHHHcCCC--eEEEEc
Confidence 46667888888888988 77666544 56778899999998 776655
No 323
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=49.14 E-value=10 Score=18.77 Aligned_cols=20 Identities=25% Similarity=0.204 Sum_probs=15.1
Q ss_pred CCCCCcCChhhHHHhHHHHHH
Q psy5399 44 TPGCSVTHLPGYLAKEKDLKA 64 (156)
Q Consensus 44 cp~C~~~~l~~l~~~~~~~~~ 64 (156)
||.|.. .+.....+..-|.+
T Consensus 8 CP~C~~-~l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 8 CPQCMK-SLGSADELFKHYEA 27 (34)
T ss_dssp CTTTCC-EESSHHHHHHHHHH
T ss_pred CcHHHH-HcCCHHHHHHHHHh
Confidence 999985 47887777776654
No 324
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=48.36 E-value=18 Score=28.02 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=35.5
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. ++.||.+..+-++.++++.++.
T Consensus 223 ~p~~~eLi~~L~~~G~~-v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGID-CYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp CHHHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHCTTSS
T ss_pred CHHHHHHHHHHHHCCCe-EEEEcCCcHHHHHHHHHHhCcc
Confidence 48999999999999999 9999999999999999998754
No 325
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=46.79 E-value=61 Score=21.50 Aligned_cols=59 Identities=10% Similarity=-0.031 Sum_probs=42.1
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCC-HHHHHHHHHHcCCCcceEEE--ec-CC----chhHHhhCCe
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVND-AFVMEAWCRKNNAEGKIRFL--AD-PN----LEFTKKLGVE 111 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~~~~~~~f~~~--~D-~~----~~~~~~~gv~ 111 (156)
.|...++.+++++.|+. +..+|..+ ....+.+.+..++..-|..+ .. ++ ..+.+++|+.
T Consensus 70 ~~g~~e~L~~L~~~G~~-v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~ 136 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGVP-GAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIP 136 (187)
T ss_dssp CTTHHHHHHHHHHHTCC-EEEEECCSCHHHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCC
T ss_pred chhHHHHHHHHHHCCce-EEEEeCCCChHHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCC
Confidence 47888888899989999 88888877 68888889998876435532 32 22 2345666663
No 326
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=46.51 E-value=42 Score=22.83 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=33.0
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|......++.+++..++.
T Consensus 94 ~~g~~~~l~~l~~~g~~-~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDL-CALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp CHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHcCCC
Confidence 47778888888888998 8888888888888899998875
No 327
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=45.55 E-value=42 Score=23.41 Aligned_cols=43 Identities=12% Similarity=-0.013 Sum_probs=33.9
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEe
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLA 98 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~ 98 (156)
+...+..+++++.|+. ++.+|..+....+.+.++.++. .++++
T Consensus 25 ~~~~~~l~~l~~~g~~-~~i~TGr~~~~~~~~~~~l~~~--~~~I~ 67 (227)
T 1l6r_A 25 TKAIESIRSAEKKGLT-VSLLSGNVIPVVYALKIFLGIN--GPVFG 67 (227)
T ss_dssp HHHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHHTCC--SCEEE
T ss_pred HHHHHHHHHHHHCCCE-EEEECCCCcHHHHHHHHHhCCC--CeEEE
Confidence 5666777888888998 8888888888889999888876 44443
No 328
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=45.35 E-value=46 Score=19.69 Aligned_cols=34 Identities=9% Similarity=0.160 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHcCCCc-ceEEEecCCchhHHhhCCe
Q psy5399 77 DAFVMEAWCRKNNAEG-KIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 77 ~~~~~~~~~~~~~~~~-~f~~~~D~~~~~~~~~gv~ 111 (156)
++++.++..+++++.. ++|-+...| -+++.||+.
T Consensus 18 s~eEk~~lL~~y~i~~~qLP~I~~~D-Pvar~~G~k 52 (77)
T 1eik_A 18 NESEAKRVLKELDAHPEQLPKIKTTD-PVAKAIGAK 52 (77)
T ss_dssp CHHHHHHHHHHTTCCTTTSCCCBTTS-HHHHGGGCC
T ss_pred CHHHHHHHHHHcCCCHHHCCeeeCcC-HhhHHhCCC
Confidence 6788888899998754 477666544 577888884
No 329
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=44.93 E-value=53 Score=21.90 Aligned_cols=45 Identities=9% Similarity=0.016 Sum_probs=34.3
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCH---HHHHHHHHHcCCCcceEEE
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDA---FVMEAWCRKNNAEGKIRFL 97 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~---~~~~~~~~~~~~~~~f~~~ 97 (156)
.|...++.+++++.|+. +..+|..+. +.++...+..++..-|..+
T Consensus 36 ~~g~~~~L~~L~~~g~~-~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i 83 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFK-QAILSNTATSDTEVIKRVLTNFGIIDYFDFI 83 (189)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEECCSSCCHHHHHHHHHHTTCGGGEEEE
T ss_pred CcCHHHHHHHHHHCCCE-EEEEECCCccchHHHHHHHHhcCchhheEEE
Confidence 58888999999999998 887876543 7788888999875435533
No 330
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=43.69 E-value=21 Score=28.45 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=25.2
Q ss_pred cCCCcCCcceecccCCCceeehhhHhC-CCeEEEEE
Q psy5399 4 QVGDTLPDALLHENTPQTKIQIADAIK-GKKVIIFG 38 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~g~~~~l~~~~~-gk~vvl~f 38 (156)
.+|..+|++.+. ..+| ..++.|++. |++++|.|
T Consensus 396 ~~G~r~p~~~l~-~~~~-~~~l~d~~~~~~~~ll~~ 429 (499)
T 2qa2_A 396 LLGMRMPHQELV-RAHG-KTSTTELLHPARGVLLDI 429 (499)
T ss_dssp TTTSBCCCCEEE-CSSS-EEETTGGGTTCSEEEEEC
T ss_pred CCCCCCCCCeee-cCCC-ceeHHHHhcCCeEEEEEe
Confidence 479999999997 4555 678888774 56777765
No 331
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=43.65 E-value=7.2 Score=22.94 Aligned_cols=20 Identities=25% Similarity=0.765 Sum_probs=17.2
Q ss_pred hCCCeEEEEEeeCCCCCCCC
Q psy5399 29 IKGKKVIIFGVPGAFTPGCS 48 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~ 48 (156)
++|+.++|--.|+.+|+.|-
T Consensus 24 ~~G~~~~I~~Vp~~~C~~CG 43 (78)
T 3ga8_A 24 FRGRKTVLKGIHGLYCVHCE 43 (78)
T ss_dssp ETTEEEEEEEEEEEEETTTC
T ss_pred ECCEEEEEcCceeEECCCCC
Confidence 68888888788999999996
No 332
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=42.20 E-value=53 Score=19.48 Aligned_cols=34 Identities=9% Similarity=0.159 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHcCCCc-ceEEEecCCchhHHhhCCe
Q psy5399 77 DAFVMEAWCRKNNAEG-KIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 77 ~~~~~~~~~~~~~~~~-~f~~~~D~~~~~~~~~gv~ 111 (156)
++++.++.++++++.. ++|-+...| -+++.||+.
T Consensus 16 s~eEk~~lL~~y~i~~~qLPrI~~~D-Pvar~~G~k 50 (78)
T 1hmj_A 16 PKEEVEEILKRYNIKIQQLPKIYEDD-PVIQEIGAK 50 (78)
T ss_pred CHHHHHHHHHHcCCCHHHCCeeeCcC-HhhHHhCCC
Confidence 6788888899998764 466554443 477888884
No 333
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=41.79 E-value=21 Score=28.41 Aligned_cols=33 Identities=12% Similarity=0.267 Sum_probs=25.0
Q ss_pred cCCCcCCcceecccCCCceeehhhHhC-CCeEEEEE
Q psy5399 4 QVGDTLPDALLHENTPQTKIQIADAIK-GKKVIIFG 38 (156)
Q Consensus 4 ~~G~~~P~f~l~~~~~g~~~~l~~~~~-gk~vvl~f 38 (156)
.+|..+|++.+. ..+| ..++.|++. |++++|.|
T Consensus 395 ~~G~r~p~~~l~-~~~~-~~~l~d~~~~~~~~ll~~ 428 (500)
T 2qa1_A 395 LLGKRMPALELT-TATR-ETSSTELLHTARGVLLDL 428 (500)
T ss_dssp TTTSBCCCCEEE-CSSC-EEEHHHHTTTCCEEEEET
T ss_pred cCCCCCCCCeee-cCCC-cEeHHHHhCCCeEEEEEe
Confidence 479999999997 4555 688999774 46777765
No 334
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=41.52 E-value=48 Score=22.00 Aligned_cols=43 Identities=14% Similarity=0.195 Sum_probs=33.8
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecC---------------CHHHHHHHHHHcCCCcceEEE
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVN---------------DAFVMEAWCRKNNAEGKIRFL 97 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d---------------~~~~~~~~~~~~~~~~~f~~~ 97 (156)
.|...++.+++++.|+. +..+|.. ....++..++..++. |..+
T Consensus 44 ~pg~~e~L~~L~~~G~~-l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v 101 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGYK-LVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEV 101 (176)
T ss_dssp CTTHHHHHHHHHHTTEE-EEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEE
T ss_pred CccHHHHHHHHHHCCCE-EEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEE
Confidence 57888888999998988 8778776 456677888899987 7643
No 335
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=40.30 E-value=19 Score=26.48 Aligned_cols=82 Identities=10% Similarity=0.045 Sum_probs=47.3
Q ss_pred CcCCcceecccCCCceeehhhHhC-------CCeEEEEEeeCCCCCCCCcCChhhHHHhHH---------HHHHcCCCEE
Q psy5399 7 DTLPDALLHENTPQTKIQIADAIK-------GKKVIIFGVPGAFTPGCSVTHLPGYLAKEK---------DLKAKGIHEI 70 (156)
Q Consensus 7 ~~~P~f~l~~~~~g~~~~l~~~~~-------gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~---------~~~~~~~~~v 70 (156)
+.+|-|++. +..|.++-.+. -. ++.|.++|+ +...+...|.++.. +. ..++. |
T Consensus 12 ~~VPVF~It-n~~G~Pll~~~-~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~~~~-~~~~k-V 80 (252)
T 4ev1_A 12 DSVPIYLVT-NEKGLPLSRPL-PNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKMQEI-VKSLQ-V 80 (252)
T ss_dssp TTSEEEEEE-CTTCCBCEEEC-CCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHHHHH-HTTCE-E
T ss_pred cCCcEEEEE-CCCCCeEEEec-CCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchhhhh-ccCce-E
Confidence 358999999 79999888765 22 344666665 33222223333333 22 23566 9
Q ss_pred EEEecCCHHHHHHHH--HHcCCCcceEEEecCC
Q psy5399 71 FCIAVNDAFVMEAWC--RKNNAEGKIRFLADPN 101 (156)
Q Consensus 71 ~~is~d~~~~~~~~~--~~~~~~~~f~~~~D~~ 101 (156)
..||.+....+.+-- +..++. |.++.|+.
T Consensus 81 ~~vsL~~vyql~~~~~~k~~~l~--F~fvP~~~ 111 (252)
T 4ev1_A 81 TAVPLGVIYQQLQQTKKDPNRLL--FAFKPVDQ 111 (252)
T ss_dssp EEEEHHHHHHHHHHTTTCTTCEE--EEEECCHH
T ss_pred EEeeHHHHHHHHHhhccCCcCce--EEEcCCHH
Confidence 999998655443211 122233 88998864
No 336
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=40.23 E-value=39 Score=22.93 Aligned_cols=39 Identities=21% Similarity=0.254 Sum_probs=33.3
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|.......+..++..++.
T Consensus 88 ~~g~~~~l~~L~~~g~~-~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 88 TPGIRELVSRLQERNVQ-VFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHCCCc-EEEEeCChHHHHHHHHHHcCCC
Confidence 47788888888999998 8888888888888899999886
No 337
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=39.36 E-value=39 Score=22.61 Aligned_cols=29 Identities=21% Similarity=0.277 Sum_probs=20.1
Q ss_pred CCcceeeeEEEEEe-CCcEEEEEEccCCCc
Q psy5399 117 LGGWRSKRYSMVVD-DGKITQLNIEPDGTG 145 (156)
Q Consensus 117 ~~~~~~~~~~~iid-~G~I~~~~~~~~~~~ 145 (156)
+|.|-+--.++++| .|+|.....+|+.+-
T Consensus 103 LGvPGSGSmLvimD~kGRiLtas~SPs~~i 132 (156)
T 3brc_A 103 LGVPGSGSLLVIMDSRGRLLSAAMSPPHVI 132 (156)
T ss_dssp CSSTTSCEEEEEEETTSCEEEEEEECCTTT
T ss_pred ccCCCCccEEEEEcCCCcEEeeccCchhhh
Confidence 34443333466669 999999999887653
No 338
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=39.25 E-value=62 Score=21.16 Aligned_cols=40 Identities=18% Similarity=0.196 Sum_probs=32.4
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCc
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEG 92 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~ 92 (156)
.|...++.+.+++.|+. +..+|..+....+...+..++..
T Consensus 91 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~~ 130 (214)
T 3e58_A 91 FPDVLKVLNEVKSQGLE-IGLASSSVKADIFRALEENRLQG 130 (214)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTTCGG
T ss_pred CchHHHHHHHHHHCCCC-EEEEeCCcHHHHHHHHHHcCcHh
Confidence 36677778888888988 88889888888888888888743
No 339
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=38.49 E-value=49 Score=21.27 Aligned_cols=35 Identities=20% Similarity=0.108 Sum_probs=25.1
Q ss_pred HHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 56 LAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 56 ~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.+..+++++.|+. ++.+|..+....+.++++.++.
T Consensus 42 ~~~l~~l~~~g~~-~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 42 GIGIKLLQKMGIT-LAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp HHHHHHHHTTTCE-EEEEESCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCE-EEEEeCCCcHHHHHHHHHcCCH
Confidence 4566666777777 7777777777777777777765
No 340
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=37.34 E-value=14 Score=27.50 Aligned_cols=63 Identities=17% Similarity=0.173 Sum_probs=38.1
Q ss_pred CcCCcceecccCCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHH---HcCCCEEEEEecCCHHH
Q psy5399 7 DTLPDALLHENTPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLK---AKGIHEIFCIAVNDAFV 80 (156)
Q Consensus 7 ~~~P~f~l~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~---~~~~~~v~~is~d~~~~ 80 (156)
+.+|-|++. +..|.++-.+. .++-|.++|+ +...+...|.++.+.-. ..++. |..+|.+..-.
T Consensus 75 ~~VPVF~It-n~~G~Pll~~~--~~~~V~~fF~-------s~~DA~a~L~el~k~~~~~~~~~~k-V~pvsL~kvy~ 140 (279)
T 4e6z_A 75 EVIPVFLIT-NYNSSPYIFQE--NEKQVCYMFL-------CPYDAENMLNDMIKYNGMKYNGNIK-IHNITMKKAYE 140 (279)
T ss_dssp TTSEEEEEE-CTTCCBCCEEE--TTEEEEEEES-------SHHHHHHHHHHHHHHCHHHHTTSCE-EEEEEHHHHHH
T ss_pred cCCCEEEEE-cCCCCEEEecC--CCCeEEEEEC-------CHHHHHHHHHHHHhccCcccccCce-EEEecHHHHHH
Confidence 358999999 79999887765 4555666655 33222222333332221 34666 99999876543
No 341
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=36.96 E-value=70 Score=21.38 Aligned_cols=40 Identities=10% Similarity=0.035 Sum_probs=32.5
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCc
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEG 92 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~ 92 (156)
.+.+.++.+.+++.|+. +..+|..+....+...+..++..
T Consensus 93 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~~ 132 (233)
T 3s6j_A 93 LPGAVELLETLDKENLK-WCIATSGGIDTATINLKALKLDI 132 (233)
T ss_dssp CTTHHHHHHHHHHTTCC-EEEECSSCHHHHHHHHHTTTCCT
T ss_pred CCCHHHHHHHHHHCCCe-EEEEeCCchhhHHHHHHhcchhh
Confidence 36677788888888999 88888888888888888888753
No 342
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=36.89 E-value=48 Score=20.89 Aligned_cols=56 Identities=20% Similarity=0.228 Sum_probs=33.2
Q ss_pred EEEEeeCCCCC--CC---CcCChhhHHHhHHHHHHcCCCEEEEEecC-CH------HHHHHHHHHcCCC
Q psy5399 35 IIFGVPGAFTP--GC---SVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DA------FVMEAWCRKNNAE 91 (156)
Q Consensus 35 vl~f~~~~~cp--~C---~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~------~~~~~~~~~~~~~ 91 (156)
+-+|=|+-+|+ .| ..++|-.+....+.+++.|+. |-=.+.. .| ....++++++|..
T Consensus 7 i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~-V~RyNL~~~P~~F~~N~~V~~~L~~~G~~ 74 (106)
T 3ktb_A 7 IEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGII-VTRHNLRDEPQVYVSNKTVNDFLQKHGAD 74 (106)
T ss_dssp EEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCC-CEEEETTTCTTHHHHSHHHHHHHHTTCGG
T ss_pred EEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCE-EEEEccccChHHHhcCHHHHHHHHHcCcc
Confidence 44556888777 34 334566666777788888888 6544432 22 2345555555543
No 343
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=36.26 E-value=13 Score=23.55 Aligned_cols=27 Identities=7% Similarity=-0.018 Sum_probs=20.6
Q ss_pred EEEEeCCcEEEEEEccCCCceeecchh
Q psy5399 126 SMVVDDGKITQLNIEPDGTGLTCSLVD 152 (156)
Q Consensus 126 ~~iid~G~I~~~~~~~~~~~~~~~~~~ 152 (156)
.||+|.|..+|+|++..........+.
T Consensus 41 ~FILd~g~~iyvW~G~~ss~~Ek~~A~ 67 (114)
T 1svq_A 41 CFLLDAGLTIYQFNGSKSSPQEKNKAA 67 (114)
T ss_dssp EEEEEETTEEEECCCTTCCHHHHHHHH
T ss_pred eEEEecCCEEEEEeCCCCCHHHHHHHH
Confidence 799997888999999887665544443
No 344
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=36.15 E-value=66 Score=21.04 Aligned_cols=40 Identities=18% Similarity=0.068 Sum_probs=32.4
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCc
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEG 92 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~ 92 (156)
.|...++.+.+++.|+. +..+|..+....+...+..++..
T Consensus 86 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~~~~ 125 (216)
T 2pib_A 86 NPGVREALEFVKSKRIK-LALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCGG
T ss_pred CcCHHHHHHHHHHCCCC-EEEEeCCcHHhHHHHHHhcChHH
Confidence 46777788888888888 88888888888888888888753
No 345
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=35.92 E-value=73 Score=19.28 Aligned_cols=54 Identities=13% Similarity=0.132 Sum_probs=36.1
Q ss_pred HHHhHHHHHHcCCCEEEEEecCCHH----HHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 55 YLAKEKDLKAKGIHEIFCIAVNDAF----VMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 55 l~~~~~~~~~~~~~~v~~is~d~~~----~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
+.+-.+..+...+. ++.++.|.++ .+..++++++.+ +-.+.....+++...|..
T Consensus 20 ~~~v~kai~~gka~-lViiA~D~~~~~~~~i~~~c~~~~ip--~~~~~~s~~eLG~a~Gk~ 77 (99)
T 3j21_Z 20 SNETIRLAKTGGAK-LIIVAKNAPKEIKDDIYYYAKLSDIP--VYEFEGTSVELGTLLGKP 77 (99)
T ss_dssp HHHHHHHHHHTCCS-EEEEECCCCHHHHHHHHHHHHHTTCC--EEEECCCSCGGGGTTCST
T ss_pred HHHHHHHHHcCCcc-EEEEeCCCCHHHHHHHHHHHHHcCCC--EEEeCCCHHHHHHHHCCC
Confidence 34455556666777 8888887543 345567777777 655545567888888874
No 346
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=35.44 E-value=83 Score=19.76 Aligned_cols=52 Identities=13% Similarity=0.142 Sum_probs=36.4
Q ss_pred HhHHHHHHcCCCEEEEEecCCH----HHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 57 AKEKDLKAKGIHEIFCIAVNDA----FVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 57 ~~~~~~~~~~~~~v~~is~d~~----~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
+-.+.++...+. ++.++.|.+ .....++..++.+ +-.+.+...++++..|..
T Consensus 33 ~t~kai~~gkak-LVilA~D~~~~~~~~i~~~c~~~~ip--v~~~~~s~~eLG~A~Gk~ 88 (112)
T 3iz5_f 33 TVLKTLRSSLGK-LIILANNCPPLRKSEIETYAMLAKIS--VHHFHGNNVDLGTACGKY 88 (112)
T ss_dssp HHHHHHHTTCCS-EEEECSCCCHHHHHHHHHHHHHTTCC--EECCCCTTCTHHHHHCTT
T ss_pred HHHHHHHcCCce-EEEEeCCCCHHHHHHHHHHHHHcCCc--EEEeCCCHHHHHHHhCCc
Confidence 344555555677 888887743 4456678888887 777656678899999874
No 347
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=35.11 E-value=39 Score=21.31 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=24.1
Q ss_pred EEEecCCHHHHHHHHHHcCCCcceEEEecCC
Q psy5399 71 FCIAVNDAFVMEAWCRKNNAEGKIRFLADPN 101 (156)
Q Consensus 71 ~~is~d~~~~~~~~~~~~~~~~~f~~~~D~~ 101 (156)
+.+..++.|+.-+|++++|+. |.+.-...
T Consensus 54 v~L~F~skE~AiayAek~G~~--y~V~ep~~ 82 (106)
T 2jya_A 54 VKLTFETQEQAEAYAQRKGIE--YRVILPKE 82 (106)
T ss_dssp EEEEESSHHHHHHHHHHHTCE--EEECCCTT
T ss_pred ceEecCCHHHHHHHHHHcCCE--EEEeCCCc
Confidence 468889999999999999999 87775433
No 348
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=34.58 E-value=78 Score=21.53 Aligned_cols=39 Identities=13% Similarity=0.248 Sum_probs=32.2
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCC---------------HHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVND---------------AFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~---------------~~~~~~~~~~~~~~ 91 (156)
.|...++.+++++.|+. +..+|..+ ...++..+++.++.
T Consensus 52 ~pg~~e~L~~L~~~G~~-~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 52 IDGVIDAMRELKKMGFA-LVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHCCCe-EEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 58888899999999998 88888877 36677888888876
No 349
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=34.14 E-value=74 Score=21.05 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=32.0
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcce
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKI 94 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f 94 (156)
|...++.+.+++.|+. +..+|.......+...+..++..-|
T Consensus 73 ~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~~~f 113 (205)
T 3m9l_A 73 PGAVELVRELAGRGYR-LGILTRNARELAHVTLEAIGLADCF 113 (205)
T ss_dssp TTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCGGGS
T ss_pred ccHHHHHHHHHhcCCe-EEEEeCCchHHHHHHHHHcCchhhc
Confidence 5666777888888988 8888888888888888888874324
No 350
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=33.64 E-value=81 Score=19.12 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=35.5
Q ss_pred HHhHHHHHHcCCCEEEEEecCCHHH----HHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 56 LAKEKDLKAKGIHEIFCIAVNDAFV----MEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 56 ~~~~~~~~~~~~~~v~~is~d~~~~----~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
++-.+..+...+. ++.++.|.+.. +..++++++.+ +-.+.....++++..|..
T Consensus 22 ~~v~kai~~gka~-lViiA~D~~~~~~~~l~~~c~~~~vp--~~~~~~s~~eLG~a~G~~ 78 (101)
T 1w41_A 22 RKSIQYAKMGGAK-LIIVARNARPDIKEDIEYYARLSGIP--VYEFEGTSVELGTLLGRP 78 (101)
T ss_dssp HHHHHHHHHTCCS-EEEEETTSCHHHHHHHHHHHHHHTCC--EEEESSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCc-EEEEeCCCCHHHHHHHHHHHHhcCCC--EEEecCCHHHHHHHhCCC
Confidence 3444555666677 88888875433 45567777776 655545567888888874
No 351
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=33.57 E-value=65 Score=21.97 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=32.4
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCH---------------HHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDA---------------FVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~---------------~~~~~~~~~~~~~ 91 (156)
.|...+..+++++.|+. ++.+|..+. +.++..+++.++.
T Consensus 58 ~~g~~e~L~~L~~~G~~-~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 111 (218)
T 2o2x_A 58 RPQMLPAIATANRAGIP-VVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF 111 (218)
T ss_dssp CGGGHHHHHHHHHHTCC-EEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHCCCE-EEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc
Confidence 58888889999999999 888888766 6778888888875
No 352
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=33.33 E-value=9.4 Score=29.60 Aligned_cols=18 Identities=11% Similarity=0.329 Sum_probs=13.1
Q ss_pred hCCCeEEEEEeeCCCCCCCC
Q psy5399 29 IKGKKVIIFGVPGAFTPGCS 48 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~ 48 (156)
.+..+|+|+. .+|||+|.
T Consensus 258 I~~~~VvVYs--k~~CPyC~ 275 (362)
T 2jad_A 258 IAENEIFVAS--KTYCPYSH 275 (362)
T ss_dssp HHTCSEEEEE--CTTCHHHH
T ss_pred hccCCEEEEE--cCCCcchH
Confidence 3455666665 68999999
No 353
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=32.99 E-value=80 Score=18.89 Aligned_cols=30 Identities=10% Similarity=0.088 Sum_probs=15.3
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHH
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEA 83 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~ 83 (156)
...++++.+-+..|+. -=.+-.-+|+++.+
T Consensus 64 ndvnefqneakkegvs-ydvlkstdpeeltq 93 (112)
T 2lnd_A 64 NDVNEFQNEAKKEGVS-YDVLKSTDPEELTQ 93 (112)
T ss_dssp HHHHHHHHHHHHHTCE-EEEEECCCHHHHHH
T ss_pred ccHHHHHHHHHhcCcc-hhhhccCCHHHHHH
Confidence 4555666665555665 33333444554433
No 354
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=32.74 E-value=1e+02 Score=21.15 Aligned_cols=38 Identities=18% Similarity=0.087 Sum_probs=30.8
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
+...+..++++++|+. ++.+|.-+......+.+..+++
T Consensus 23 ~~~~~al~~l~~~G~~-v~i~TGR~~~~~~~~~~~l~~~ 60 (231)
T 1wr8_A 23 EKALEAIRRAESLGIP-IMLVTGNTVQFAEAASILIGTS 60 (231)
T ss_dssp HHHHHHHHHHHHTTCC-EEEECSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCE-EEEEcCCChhHHHHHHHHcCCC
Confidence 5667777888888999 8888888888888888888876
No 355
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=31.72 E-value=86 Score=20.89 Aligned_cols=39 Identities=8% Similarity=0.118 Sum_probs=32.0
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|..+.+..+...+..++.
T Consensus 98 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 98 FADVPQALQQLRAAGLK-TAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHTCG
T ss_pred CCCHHHHHHHHHhCCCe-EEEEeCCCHHHHHHHHHHCCCh
Confidence 47778888888888988 8888888888888888888764
No 356
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=31.66 E-value=84 Score=21.26 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=31.5
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|..+....+.+.+..++.
T Consensus 85 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 85 YPEIPYTLEALKSKGFK-LAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCG
T ss_pred CCCHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHcCCH
Confidence 47777888888888888 8888888888788888888864
No 357
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=31.41 E-value=34 Score=20.90 Aligned_cols=15 Identities=33% Similarity=0.652 Sum_probs=12.8
Q ss_pred EEEEe-CCcEEEEEEc
Q psy5399 126 SMVVD-DGKITQLNIE 140 (156)
Q Consensus 126 ~~iid-~G~I~~~~~~ 140 (156)
.|.|+ +|+|..+.+.
T Consensus 45 ~f~I~~~G~v~~~~v~ 60 (106)
T 2k9k_A 45 SFTIDTTGKAVDINVV 60 (106)
T ss_dssp EEEEETTTEEEEEEEE
T ss_pred EEEECCCCcEEEEEEE
Confidence 78888 9999998764
No 358
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=31.34 E-value=98 Score=24.68 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=35.8
Q ss_pred CcCChhhHHHhHHHHHHcCCCEEEEEec------CCHHHHHHHHHH------cCCCcceEEEecC
Q psy5399 48 SVTHLPGYLAKEKDLKAKGIHEIFCIAV------NDAFVMEAWCRK------NNAEGKIRFLADP 100 (156)
Q Consensus 48 ~~~~l~~l~~~~~~~~~~~~~~v~~is~------d~~~~~~~~~~~------~~~~~~f~~~~D~ 100 (156)
..+++..|.++.+.-++.++..+++||+ ++.+..+...++ .|... |.++.|.
T Consensus 53 p~eel~~l~eLv~~a~~~~V~Fv~aisPG~di~~s~~~d~~~L~~K~~ql~~lGVr~-FaIlfDD 116 (447)
T 2xsa_A 53 DAAGLARLTELRDAAAARGMVFYVSLAPCLDVTYSDPQDRAALLARVDQLARAGLRN-LVLLFDD 116 (447)
T ss_dssp CHHHHHHHHHHHHHHHTTTCEEEEEECCCSSCCTTCHHHHHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHHHhCCCE-EEEeccC
Confidence 3456788999999989999986789998 244444333333 34443 9999886
No 359
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=31.18 E-value=95 Score=21.06 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=30.9
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
|...++.+.+++.|+. +..+|......++.+.+..++.
T Consensus 108 ~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 108 PDAAETLEKLKSAGYI-VAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp TTHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTTCG
T ss_pred CCHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHhcCcH
Confidence 6777778888888988 8888888888888888888864
No 360
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=30.34 E-value=65 Score=21.80 Aligned_cols=43 Identities=5% Similarity=-0.086 Sum_probs=27.4
Q ss_pred CCCCCcC-----ChhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHc
Q psy5399 44 TPGCSVT-----HLPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKN 88 (156)
Q Consensus 44 cp~C~~~-----~l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~ 88 (156)
||-|-.. ..+.+..+.+.+++.|.. |..||.++.+.. ++++.+
T Consensus 106 c~~~g~~~~~~e~~~~ve~L~e~~~~~G~~-v~ivs~~~eeG~-ql~~~f 153 (166)
T 3ir9_A 106 CPKCGSSLEVTDVTDIVDEFSELADKSNAK-VVFVSTDFDEGS-QLMNAF 153 (166)
T ss_dssp CTTTCCBEEEEEEEEHHHHHHHHHHHTTCE-EEEECSCSHHHH-HHHHTS
T ss_pred ccccCccchhhhHHHHHHHHHHHHHhcCCE-EEEECCCChhHH-HHHHcC
Confidence 7777631 113355788888888998 999988776542 343443
No 361
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=30.10 E-value=1e+02 Score=20.61 Aligned_cols=39 Identities=10% Similarity=0.230 Sum_probs=31.5
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|..+....+...+..++.
T Consensus 101 ~~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~~l~ 139 (233)
T 3umb_A 101 FPENVPVLRQLREMGLP-LGILSNGNPQMLEIAVKSAGMS 139 (233)
T ss_dssp CTTHHHHHHHHHTTTCC-EEEEESSCHHHHHHHHHTTTCT
T ss_pred CCCHHHHHHHHHhCCCc-EEEEeCCCHHHHHHHHHHCCcH
Confidence 36777778888888998 8888888888888888888764
No 362
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=29.64 E-value=88 Score=21.55 Aligned_cols=38 Identities=13% Similarity=0.126 Sum_probs=30.5
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
|...++.+.+++.|+. +..+|..+...++..++..++.
T Consensus 117 ~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 117 PNVKETLEALKAQGYI-LAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp TTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCG
T ss_pred CCHHHHHHHHHHCCCE-EEEEECCcHHHHHHHHHHcCch
Confidence 6677777888888888 8888888888788888888864
No 363
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=29.16 E-value=1.1e+02 Score=20.51 Aligned_cols=38 Identities=11% Similarity=0.189 Sum_probs=30.0
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
|...++.+.+++.|+. +..+|..+...++.+.+..++.
T Consensus 98 ~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 98 SEVPDSLRELKRRGLK-LAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp TTHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTTCG
T ss_pred ccHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHhcChH
Confidence 6677777888888888 8878887777788888888764
No 364
>1yd6_A UVRC; DNA binding protein; 2.00A {Bacillus caldotenax}
Probab=29.14 E-value=35 Score=21.06 Aligned_cols=21 Identities=10% Similarity=0.180 Sum_probs=15.7
Q ss_pred ceeeeEEEEE-e-CCcEEEEEEc
Q psy5399 120 WRSKRYSMVV-D-DGKITQLNIE 140 (156)
Q Consensus 120 ~~~~~~~~ii-d-~G~I~~~~~~ 140 (156)
.|..|.++++ | +|+|+|+--.
T Consensus 12 lP~~pGVY~~~d~~g~vlYVGKA 34 (99)
T 1yd6_A 12 LPEQPGCYLMKDKHGTVIYVGKA 34 (99)
T ss_dssp CCSSCEEEEEECSSCCEEEEEEE
T ss_pred CCCCCeEEEEEcCCCCEEEEecC
Confidence 3567778888 7 9999998543
No 365
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=28.94 E-value=71 Score=21.49 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=31.4
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|..+....+...+..++.
T Consensus 105 ~~~~~~~l~~l~~~g~~-~~i~T~~~~~~~~~~l~~~gl~ 143 (231)
T 3kzx_A 105 NDGAIELLDTLKENNIT-MAIVSNKNGERLRSEIHHKNLT 143 (231)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHTTCG
T ss_pred CcCHHHHHHHHHHCCCe-EEEEECCCHHHHHHHHHHCCch
Confidence 46777788888888888 8888888888888888888864
No 366
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=28.78 E-value=1.6e+02 Score=22.88 Aligned_cols=38 Identities=18% Similarity=0.250 Sum_probs=23.3
Q ss_pred EEEeeCCCCCCCCcCChhhHHHhHHHHH---HcCCCEEEEEec
Q psy5399 36 IFGVPGAFTPGCSVTHLPGYLAKEKDLK---AKGIHEIFCIAV 75 (156)
Q Consensus 36 l~f~~~~~cp~C~~~~l~~l~~~~~~~~---~~~~~~v~~is~ 75 (156)
|.+..|..||.|.. ....+.+..+--. ..|-. |+..+.
T Consensus 58 ieli~GPGCPVCVt-p~~~ID~ai~LA~~~~~~~~~-vi~~Tf 98 (372)
T 2z1d_A 58 VKVVSGPGCPVCIT-PVEDIVAMQLIMRKAREEGEE-IILTTF 98 (372)
T ss_dssp EEEEECCCCTTTTS-CHHHHHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred cEEecCCCCccEEC-cHHHHHHHHHHHhhhcccCCC-eEEEec
Confidence 44555889999995 5677776655433 32233 555554
No 367
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=28.26 E-value=1.1e+02 Score=20.71 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=27.9
Q ss_pred hCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEec
Q psy5399 29 IKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAV 75 (156)
Q Consensus 29 ~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~ 75 (156)
++..-++|.|- +..+ . +...+++.+.+++|+. |++|+.
T Consensus 75 i~~~D~vii~S-----~Sg~--n-~~~ie~A~~ake~G~~-vIaITs 112 (170)
T 3jx9_A 75 LHAVDRVLIFT-----PDTE--R-SDLLASLARYDAWHTP-YSIITL 112 (170)
T ss_dssp CCTTCEEEEEE-----SCSC--C-HHHHHHHHHHHHHTCC-EEEEES
T ss_pred CCCCCEEEEEe-----CCCC--C-HHHHHHHHHHHHCCCc-EEEEeC
Confidence 34455677763 2233 3 7788899999999999 999987
No 368
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=28.18 E-value=58 Score=20.58 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=23.5
Q ss_pred EEecCCHHHHHHHHHHcCCCcceEEEecCC
Q psy5399 72 CIAVNDAFVMEAWCRKNNAEGKIRFLADPN 101 (156)
Q Consensus 72 ~is~d~~~~~~~~~~~~~~~~~f~~~~D~~ 101 (156)
.+..++.++.-+|++++|+. |.+.-...
T Consensus 63 ~L~F~skE~AiayAek~G~~--y~V~ep~~ 90 (108)
T 2lju_A 63 CLSFTTRELAIAYAVAHKID--YTVLQDNP 90 (108)
T ss_dssp CEEESSHHHHHHHHHHTTCE--EEEECSSC
T ss_pred eEecCCHHHHHHHHHHcCCE--EEEecCCc
Confidence 47788999999999999999 88875443
No 369
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=27.90 E-value=1e+02 Score=24.04 Aligned_cols=39 Identities=15% Similarity=0.097 Sum_probs=32.6
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
+..|.++.+++++.|.. ++....+..+.+.+++++++..
T Consensus 51 ~~sL~~l~~~L~~~g~~-l~~~~g~~~~~l~~l~~~~~~~ 89 (420)
T 2j07_A 51 LENVRALREAYRARGGA-LWVLEGLPWEKVPEAARRLKAK 89 (420)
T ss_dssp HHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHcCCC
Confidence 34577788888999999 8888888888899999999886
No 370
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=27.81 E-value=46 Score=20.00 Aligned_cols=13 Identities=38% Similarity=0.529 Sum_probs=10.9
Q ss_pred EEEEe-CCcEEEEE
Q psy5399 126 SMVVD-DGKITQLN 138 (156)
Q Consensus 126 ~~iid-~G~I~~~~ 138 (156)
.+++| +|+|+++.
T Consensus 18 viv~D~~g~I~~~N 31 (121)
T 4hi4_A 18 VMIADNDLNIIYMN 31 (121)
T ss_dssp EEEEETTCBEEEEC
T ss_pred EEEEcCCCeEEEec
Confidence 56778 99999984
No 371
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=27.76 E-value=1.3e+02 Score=22.44 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=44.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEE--ecCCHHHHHHHHHHcCCCcceEEEecCCchhHHh
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCI--AVNDAFVMEAWCRKNNAEGKIRFLADPNLEFTKK 107 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~i--s~d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~ 107 (156)
-+.|++||.+|+. + .+.. ....+.++.++++ . |++| |..+.....++.+..+-. |.+++..+..+...
T Consensus 147 ~~lPiilYn~P~~-t-g~~l-~~~~~~~La~~~p----n-IvgiKdssgd~~~~~~l~~~~~~~--f~v~~G~d~~~l~~ 216 (315)
T 3si9_A 147 ISIPIIIYNIPSR-S-VIDM-AVETMRDLCRDFK----N-IIGVKDATGKIERASEQREKCGKD--FVQLSGDDCTALGF 216 (315)
T ss_dssp CSSCEEEEECHHH-H-SCCC-CHHHHHHHHHHCT----T-EEEEEECSCCTHHHHHHHHHHCSS--SEEEESCGGGHHHH
T ss_pred CCCCEEEEeCchh-h-CCCC-CHHHHHHHHhhCC----C-EEEEEeCCCCHHHHHHHHHHcCCC--eEEEecCHHHHHHH
Confidence 4679999998773 2 3453 3445555654342 3 8888 445667777777777666 99998877655443
No 372
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=27.61 E-value=50 Score=22.00 Aligned_cols=40 Identities=15% Similarity=0.225 Sum_probs=32.2
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCc
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEG 92 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~ 92 (156)
.|...++.+.+++.|+. +..+|.......+.+.+..++..
T Consensus 77 ~~~~~~~l~~l~~~g~~-~~i~S~~~~~~~~~~l~~~gl~~ 116 (217)
T 3m1y_A 77 FEGALELVSALKEKNYK-VVCFSGGFDLATNHYRDLLHLDA 116 (217)
T ss_dssp CBTHHHHHHHHHTTTEE-EEEEEEEEHHHHHHHHHHHTCSE
T ss_pred CCCHHHHHHHHHHCCCE-EEEEcCCchhHHHHHHHHcCcch
Confidence 46777888888888888 88888888888888888888763
No 373
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=27.28 E-value=98 Score=22.18 Aligned_cols=59 Identities=24% Similarity=0.135 Sum_probs=40.5
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEE-ecCCchhHHhhCCe
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFL-ADPNLEFTKKLGVE 111 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~-~D~~~~~~~~~gv~ 111 (156)
.|...+..+.+++.|+. +..+|.++....+..++..++..-|..+ ........+.+++.
T Consensus 165 ~~g~~~~l~~L~~~g~~-~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~K~~~~~~l~~~ 224 (287)
T 3a1c_A 165 KESAKPAVQELKRMGIK-VGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK 224 (287)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT
T ss_pred chhHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHHhCCceeeeecChHHHHHHHHHHhcC
Confidence 47777888888889998 8888888888888888888875212211 12224455666653
No 374
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=26.71 E-value=27 Score=21.46 Aligned_cols=37 Identities=11% Similarity=-0.011 Sum_probs=21.8
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNN 89 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~ 89 (156)
.|...++.+++++.|+. +..+|..+....+...+..+
T Consensus 20 ~~~~~~~l~~L~~~G~~-~~i~S~~~~~~~~~~l~~~~ 56 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVG-TVILSNDPGGLGAAPIRELE 56 (137)
T ss_dssp HHHHHHHHHHHHHTTCE-EEEEECSCCGGGGHHHHHHH
T ss_pred CccHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHCC
Confidence 35566666777777777 66666655444444444444
No 375
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=26.68 E-value=1.6e+02 Score=20.89 Aligned_cols=44 Identities=7% Similarity=0.027 Sum_probs=32.3
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceEEEec
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIRFLAD 99 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~~~~D 99 (156)
+...+..+++++.|+. ++.+|.-+......+.+..++. .++++.
T Consensus 24 ~~~~~al~~l~~~G~~-~~iaTGR~~~~~~~~~~~l~~~--~~~I~~ 67 (288)
T 1nrw_A 24 LENENALRQAQRDGIE-VVVSTGRAHFDVMSIFEPLGIK--TWVISA 67 (288)
T ss_dssp HHHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHGGGTCC--CEEEEG
T ss_pred HHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHcCCC--CcEEEc
Confidence 5556667777888988 7777777788888888888877 665443
No 376
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=26.45 E-value=1e+02 Score=20.22 Aligned_cols=35 Identities=11% Similarity=0.025 Sum_probs=26.6
Q ss_pred HHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 56 LAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 56 ~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.+..+++++.|+. ++.+|..+....+.++++.++.
T Consensus 41 ~~~l~~L~~~G~~-~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 41 GLGIKMLMDADIQ-VAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp HHHHHHHHHTTCE-EEEEESCCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCe-EEEEeCCCcHHHHHHHHHcCCc
Confidence 3566667778888 8888887777777888888876
No 377
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=25.85 E-value=1.2e+02 Score=20.85 Aligned_cols=39 Identities=13% Similarity=0.080 Sum_probs=31.0
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|..+...++...+..++.
T Consensus 112 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 112 IEGAAETLRALRAAGVP-FAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp CTTHHHHHHHHHHHTCC-EEEECSSCHHHHHHHHHHTTCH
T ss_pred CccHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHhcChH
Confidence 46667777888888998 8888888888888888888764
No 378
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=25.68 E-value=89 Score=20.48 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=31.6
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|......++...+..++.
T Consensus 84 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 84 TDGIKELVQDLKNKGFE-IWIFSGGLSESIQPFADYLNIP 122 (219)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHHTCC
T ss_pred ChhHHHHHHHHHHCCCe-EEEEcCCcHHHHHHHHHHcCCC
Confidence 36677778888888988 8888888888888888888875
No 379
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=25.58 E-value=99 Score=17.55 Aligned_cols=27 Identities=4% Similarity=-0.025 Sum_probs=21.8
Q ss_pred EEEecCCHHHHHHHHHHcCCCcceEEEec
Q psy5399 71 FCIAVNDAFVMEAWCRKNNAEGKIRFLAD 99 (156)
Q Consensus 71 ~~is~d~~~~~~~~~~~~~~~~~f~~~~D 99 (156)
+.|+++.....+++++++++. |.++.+
T Consensus 51 I~V~p~~~~~f~~~L~~~~I~--y~Vlie 77 (78)
T 2gjf_A 51 ILIPSDMVEWFLEMLKAKGIP--FTVYVE 77 (78)
T ss_dssp EEECTTSHHHHHHHHHHHTCC--EEEEEE
T ss_pred EEECHHHHHHHHHHHHHCCCc--EEEEeC
Confidence 567778888889999999998 887754
No 380
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=25.48 E-value=1.3e+02 Score=22.51 Aligned_cols=40 Identities=18% Similarity=0.122 Sum_probs=29.2
Q ss_pred CeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHc-CCCEEEEEe
Q psy5399 32 KKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAK-GIHEIFCIA 74 (156)
Q Consensus 32 k~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~-~~~~v~~is 74 (156)
.|+||++..+.||.... . ...+..+.+.+... |+. |+++.
T Consensus 112 ~Pvvv~~HGGg~~~g~~-~-~~~~~~~~~~la~~~g~~-Vv~~d 152 (365)
T 3ebl_A 112 FPVIIFFHGGSFVHSSA-S-STIYDSLCRRFVKLSKGV-VVSVN 152 (365)
T ss_dssp CEEEEEECCSTTTSCCT-T-BHHHHHHHHHHHHHHTSE-EEEEC
T ss_pred ceEEEEEcCCccccCCC-c-hhhHHHHHHHHHHHCCCE-EEEee
Confidence 48999999888887766 3 35667777777654 887 87775
No 381
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=25.42 E-value=89 Score=21.17 Aligned_cols=59 Identities=8% Similarity=-0.051 Sum_probs=40.5
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcc--eEEEecCC----------chhHHhhCCe
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGK--IRFLADPN----------LEFTKKLGVE 111 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~--f~~~~D~~----------~~~~~~~gv~ 111 (156)
.|...++.+.+++.|+. +..+|.......+.+.+..++..- ..+.+|.. ..+.+.+|+.
T Consensus 112 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~ 182 (240)
T 3sd7_A 112 YENMKEILEMLYKNGKI-LLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVK 182 (240)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCC
T ss_pred CccHHHHHHHHHHCCCe-EEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence 35666777888888888 888888788888888888886432 33444432 2466677774
No 382
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=25.32 E-value=56 Score=19.22 Aligned_cols=15 Identities=27% Similarity=0.527 Sum_probs=12.6
Q ss_pred EEEEe-CCcEEEEEEc
Q psy5399 126 SMVVD-DGKITQLNIE 140 (156)
Q Consensus 126 ~~iid-~G~I~~~~~~ 140 (156)
.|.|+ +|+|..+.+.
T Consensus 30 ~~~i~~~G~v~~~~v~ 45 (90)
T 1u07_A 30 KFDVTPDGRVDNVQIL 45 (90)
T ss_dssp EEEECTTSCEEEEEEE
T ss_pred EEEECCCCCEEEEEEE
Confidence 68888 9999998763
No 383
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=25.29 E-value=1.2e+02 Score=18.48 Aligned_cols=53 Identities=15% Similarity=0.173 Sum_probs=33.0
Q ss_pred HHhHHHHHHcCCCEEEEEecCC-H---HHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 56 LAKEKDLKAKGIHEIFCIAVND-A---FVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 56 ~~~~~~~~~~~~~~v~~is~d~-~---~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
.+-.+.++...+. ++.++.|. + ..+..++++++.+ +-.+.+...+++...|..
T Consensus 28 ~~v~kai~~gkak-lViiA~D~~~~~~~~i~~~c~~~~ip--~~~~~~s~~eLG~a~Gk~ 84 (104)
T 4a18_G 28 KSTIKAIRNGTAK-LVFISNNCPTVRKSEIEYYASLAQIS--IHHFVGSNVELGTACGKY 84 (104)
T ss_dssp HHHHHHHHHTCCC-EEEECTTSCHHHHHHHHHHHHHHTCE--EEECSSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCce-EEEEeCCCCHHHHHHHHHHHHHcCCc--EEEecCCHHHHHHHhCCc
Confidence 3444555666677 88888874 3 4455566666544 432345557899998874
No 384
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=25.27 E-value=93 Score=20.93 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=29.6
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|.......+...+..++.
T Consensus 106 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 144 (237)
T 4ex6_A 106 YPGVLEGLDRLSAAGFR-LAMATSKVEKAARAIAELTGLD 144 (237)
T ss_dssp CTTHHHHHHHHHHTTEE-EEEECSSCHHHHHHHHHHHTGG
T ss_pred CCCHHHHHHHHHhCCCc-EEEEcCCChHHHHHHHHHcCch
Confidence 35666777778888888 8888888887788888887764
No 385
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=25.13 E-value=1.2e+02 Score=18.51 Aligned_cols=53 Identities=17% Similarity=0.233 Sum_probs=33.3
Q ss_pred HHhHHHHHHcCCCEEEEEecCCH----HHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 56 LAKEKDLKAKGIHEIFCIAVNDA----FVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 56 ~~~~~~~~~~~~~~v~~is~d~~----~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
.+-.+.++...+. ++.++.|.+ .....+++.++.+ +-.+.+...+++...|..
T Consensus 28 ~~v~kai~~gkak-lVilA~D~~~~~~~~i~~~c~~~~ip--~~~~~~s~~eLG~A~Gk~ 84 (105)
T 3u5e_c 28 KSTVKSLRQGKSK-LIIIAANTPVLRKSELEYYAMLSKTK--VYYFQGGNNELGTAVGKL 84 (105)
T ss_dssp HHHHHHHHTTCCS-EEEECTTSCHHHHHHHHHHHHHHTCE--EEECSSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCce-EEEEeCCCCHHHHHHHHHHHHHcCCC--EEEeCCCHHHHHHHhCCc
Confidence 3444555656677 888887743 3455666676554 442345567899998874
No 386
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=25.05 E-value=12 Score=25.94 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=23.3
Q ss_pred EEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEE
Q psy5399 36 IFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIF 71 (156)
Q Consensus 36 l~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~ 71 (156)
|.+|...-||+|-.- .+.|.++.++|. .+++ |.
T Consensus 5 I~~~~D~~CP~cy~~-~~~l~~l~~~~~-~~v~-v~ 37 (208)
T 3kzq_A 5 LYYVHDPMCSWCWGY-KPTIEKLKQQLP-GVIQ-FE 37 (208)
T ss_dssp EEEEECTTCHHHHHH-HHHHHHHHHHSC-TTSE-EE
T ss_pred EEEEECCCCchhhhh-hHHHHHHHHhCC-CCce-EE
Confidence 445557789999964 589999988874 2455 54
No 387
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=24.59 E-value=38 Score=15.05 Aligned_cols=13 Identities=15% Similarity=0.128 Sum_probs=10.2
Q ss_pred EEEEe-CCcEEEEE
Q psy5399 126 SMVVD-DGKITQLN 138 (156)
Q Consensus 126 ~~iid-~G~I~~~~ 138 (156)
+.|.| +|+++...
T Consensus 7 s~IYD~~g~~i~~l 20 (26)
T 2v2f_A 7 SKIYDNKNQLIADL 20 (26)
T ss_pred CEEEeCCCCEeeec
Confidence 67888 99988754
No 388
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=24.08 E-value=2.1e+02 Score=20.91 Aligned_cols=72 Identities=8% Similarity=0.140 Sum_probs=45.1
Q ss_pred hhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEE--ecCCHHHHHHHHHHcCCCcceEEEecCCc
Q psy5399 25 IADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCI--AVNDAFVMEAWCRKNNAEGKIRFLADPNL 102 (156)
Q Consensus 25 l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~i--s~d~~~~~~~~~~~~~~~~~f~~~~D~~~ 102 (156)
+++ .-+.|++||.+|+. ..+.. ....+.++.++++ . |++| |..+.....++.+..+-. |.+++..+.
T Consensus 121 va~-a~~lPiilYn~P~~--tg~~l-~~~~~~~La~~~p----n-ivgiKds~gd~~~~~~~~~~~~~~--f~v~~G~d~ 189 (294)
T 2ehh_A 121 VAQ-EVDIPIIIYNIPSR--TCVEI-SVDTMFKLASECE----N-IVASKESTPNMDRISEIVKRLGES--FSVLSGDDS 189 (294)
T ss_dssp HHH-HCCSCEEEEECHHH--HSCCC-CHHHHHHHHHHCT----T-EEEEEECCSCHHHHHHHHHHHCTT--SEEEESSGG
T ss_pred HHH-hcCCCEEEEeCCcc--cCcCC-CHHHHHHHHhhCC----C-EEEEEeCCCCHHHHHHHHHhcCCC--eEEEECcHH
Confidence 344 24679999998773 23443 3445566654432 3 8888 445677777777766655 999987765
Q ss_pred hhHHh
Q psy5399 103 EFTKK 107 (156)
Q Consensus 103 ~~~~~ 107 (156)
.+...
T Consensus 190 ~~~~~ 194 (294)
T 2ehh_A 190 LTLPM 194 (294)
T ss_dssp GHHHH
T ss_pred HHHHH
Confidence 54443
No 389
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=23.86 E-value=1.7e+02 Score=19.64 Aligned_cols=45 Identities=16% Similarity=0.199 Sum_probs=30.6
Q ss_pred hHHHhHHHHHHcCCCEEEEEecCC----------------------------HHHHHHHHHHcCCCcceEEEecCC
Q psy5399 54 GYLAKEKDLKAKGIHEIFCIAVND----------------------------AFVMEAWCRKNNAEGKIRFLADPN 101 (156)
Q Consensus 54 ~l~~~~~~~~~~~~~~v~~is~d~----------------------------~~~~~~~~~~~~~~~~f~~~~D~~ 101 (156)
...+..+.+++.++. |++|...+ .+.++++++..+-. |-.+.+..
T Consensus 127 ~~~~~~~~~~~~~i~-v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG~--~~~~~~~~ 199 (218)
T 3ibs_A 127 GAVEAAKAAAEKGIQ-VSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKGI--YVRVDNSN 199 (218)
T ss_dssp CHHHHHHHHHTTTEE-EEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEEE--EEEECSSS
T ss_pred cHHHHHHHHHhcCCE-EEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcCCE--EEECCCCh
Confidence 355667777888888 88776543 56778888777655 66666544
No 390
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=23.82 E-value=2.7e+02 Score=21.94 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=32.3
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
..|.++.+++++.|.. ++.+..+..+.+.+++++++..
T Consensus 92 ~sL~~L~~~L~~~G~~-L~v~~g~~~~~l~~l~~~~~~~ 129 (482)
T 2xry_A 92 KGLQELEVSLSRKKIP-SFFLRGDPGEKISRFVKDYNAG 129 (482)
T ss_dssp HHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCc-EEEEeCCHHHHHHHHHHHcCCC
Confidence 4577788889999999 8888888888899999999886
No 391
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=23.71 E-value=64 Score=17.12 Aligned_cols=13 Identities=38% Similarity=0.726 Sum_probs=10.4
Q ss_pred EEEEe-CCcEEEEE
Q psy5399 126 SMVVD-DGKITQLN 138 (156)
Q Consensus 126 ~~iid-~G~I~~~~ 138 (156)
.+++| +|+|+++.
T Consensus 5 i~~~d~~g~i~~~N 18 (96)
T 3a0s_A 5 IITLSKDGRITEWN 18 (96)
T ss_dssp EEEEETTSBEEEEC
T ss_pred EEEEcCCCCEeehh
Confidence 56778 99999874
No 392
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=23.69 E-value=1.1e+02 Score=22.01 Aligned_cols=38 Identities=24% Similarity=0.282 Sum_probs=29.7
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
|...++.+.+++.|+. ++.+|.+-....+..+++.++.
T Consensus 144 ~g~~e~i~~l~~~gi~-v~ivSgg~~~~i~~i~~~~g~~ 181 (297)
T 4fe3_A 144 EGYENFFGKLQQHGIP-VFIFSAGIGDVLEEVIRQAGVY 181 (297)
T ss_dssp BTHHHHHHHHHHTTCC-EEEEEEEEHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHcCCe-EEEEeCCcHHHHHHHHHHcCCC
Confidence 5667777778888888 8888888777778888888765
No 393
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=23.64 E-value=90 Score=23.13 Aligned_cols=40 Identities=20% Similarity=0.160 Sum_probs=34.2
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCc
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEG 92 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~ 92 (156)
.|...++.+.+++.|+. +..+|.......+..++..++..
T Consensus 181 ~pg~~e~L~~Lk~~G~~-v~IvSn~~~~~~~~~l~~lgl~~ 220 (317)
T 4eze_A 181 SPGLLTILPVIKAKGFK-TAIISGGLDIFTQRLKARYQLDY 220 (317)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHHTCSE
T ss_pred CcCHHHHHHHHHhCCCE-EEEEeCccHHHHHHHHHHcCCCe
Confidence 47778888889999998 98899888888999999998863
No 394
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=23.57 E-value=1.3e+02 Score=20.83 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=31.3
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
|...+..+.+++.|+. +..+|.+.....+..++..++.
T Consensus 147 ~~~~~~l~~l~~~g~~-~~i~T~~~~~~~~~~~~~~gl~ 184 (280)
T 3skx_A 147 PESREAISKLKAIGIK-CMMLTGDNRFVAKWVAEELGLD 184 (280)
T ss_dssp TTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHHTCS
T ss_pred HhHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHcCCh
Confidence 6677778888888888 8888888888888888888875
No 395
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=23.46 E-value=1.4e+02 Score=19.78 Aligned_cols=43 Identities=16% Similarity=0.053 Sum_probs=32.9
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceE
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIR 95 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~ 95 (156)
.|...++.+.+++.|+. +..+|..+...+....+..++..-|.
T Consensus 86 ~pg~~~~l~~L~~~g~~-~~i~tn~~~~~~~~~l~~~~l~~~fd 128 (216)
T 3kbb_A 86 NPGVREALEFVKSKRIK-LALATSTPQREALERLRRLDLEKYFD 128 (216)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCGGGCS
T ss_pred CccHHHHHHHHHHcCCC-cccccCCcHHHHHHHHHhcCCCcccc
Confidence 47777888888888988 77778878888888888888754343
No 396
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=23.29 E-value=2.3e+02 Score=21.04 Aligned_cols=69 Identities=9% Similarity=0.086 Sum_probs=42.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEE--ecCCHHHHHHHHHHcC-CCcceEEEecCCchhHH
Q psy5399 30 KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCI--AVNDAFVMEAWCRKNN-AEGKIRFLADPNLEFTK 106 (156)
Q Consensus 30 ~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~i--s~d~~~~~~~~~~~~~-~~~~f~~~~D~~~~~~~ 106 (156)
-+.|++||.+|+. |..+.. ....+.++.+++. . |++| +..+.....++.+... -. |.+++-.+..+..
T Consensus 138 ~~lPiilYn~P~~-t~g~~l-~~~~~~~La~~~p----n-IvgiKdssgd~~~~~~~~~~~~~~~--f~v~~G~d~~~l~ 208 (318)
T 3qfe_A 138 SPLPVVIYNFPGV-CNGIDL-DSDMITTIARKNP----N-VVGVKLTCASVGKITRLAATLPPAA--FSVFGGQSDFLIG 208 (318)
T ss_dssp CSSCEEEEECCC-----CCC-CHHHHHHHHHHCT----T-EEEEEESSCCHHHHHHHHHHSCGGG--CEEEESCGGGHHH
T ss_pred CCCCEEEEeCCcc-cCCCCC-CHHHHHHHHhhCC----C-EEEEEeCCCCHHHHHHHHHhcCCCC--EEEEEecHHHHHH
Confidence 4679999998774 334443 3345555654332 3 8888 4456777777777654 33 9999887765544
Q ss_pred h
Q psy5399 107 K 107 (156)
Q Consensus 107 ~ 107 (156)
.
T Consensus 209 ~ 209 (318)
T 3qfe_A 209 G 209 (318)
T ss_dssp H
T ss_pred H
Confidence 4
No 397
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=23.11 E-value=98 Score=20.40 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=24.6
Q ss_pred hHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 58 KEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 58 ~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
..+.+++.|+. +..+|.+.....+.+++..++.
T Consensus 47 ~l~~L~~~g~~-~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 47 GIAALRKSGLT-MLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp HHHHHHHTTCE-EEEEESSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCe-EEEEECcChHHHHHHHHHcCCe
Confidence 45666777887 7777877777777778877765
No 398
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=23.10 E-value=1.6e+02 Score=21.22 Aligned_cols=41 Identities=10% Similarity=0.098 Sum_probs=28.6
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHH-HcCCCEEEEEe
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLK-AKGIHEIFCIA 74 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~-~~~~~~v~~is 74 (156)
..++||++..+.||.... . ...+..+...+. +.|.. |+++.
T Consensus 82 ~~p~vv~~HGgg~~~~~~-~-~~~~~~~~~~la~~~g~~-vv~~d 123 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSA-A-STIFHDFCCEMAVHAGVV-IASVD 123 (338)
T ss_dssp CEEEEEEECCSTTTSCCT-T-BHHHHHHHHHHHHHHTCE-EEEEE
T ss_pred CceEEEEEcCCcCcCCCC-C-chhHHHHHHHHHHHCCcE-EEEec
Confidence 357888888777776655 2 245677777776 67888 88885
No 399
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=23.03 E-value=2e+02 Score=20.97 Aligned_cols=72 Identities=11% Similarity=0.142 Sum_probs=44.3
Q ss_pred hhhHhCCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEE--ecCCHHHHHHHHHHcCCCcceEEEecCCc
Q psy5399 25 IADAIKGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCI--AVNDAFVMEAWCRKNNAEGKIRFLADPNL 102 (156)
Q Consensus 25 l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~i--s~d~~~~~~~~~~~~~~~~~f~~~~D~~~ 102 (156)
+++ .-+-|++||.+|+. ..+.. ....+.++.+++. . |++| +..+.....+..+..+-. |.+++..+.
T Consensus 121 ia~-a~~lPiilYn~P~~--tg~~l-~~~~~~~La~~~p----n-IvgiK~s~gd~~~~~~~~~~~~~~--f~v~~G~d~ 189 (292)
T 2vc6_A 121 IDA-ASTIPIIVYNIPGR--SAIEI-HVETLARIFEDCP----N-VKGVXDATGNLLRPSLERMACGED--FNLLTGEDG 189 (292)
T ss_dssp HHH-HCSSCEEEEECHHH--HSCCC-CHHHHHHHHHHCT----T-EEEEEECSCCTHHHHHHHHHSCTT--SEEEESCGG
T ss_pred HHH-hCCCCEEEEeCccc--cCcCC-CHHHHHHHHhhCC----C-EEEEecCCCCHHHHHHHHHHcCCC--EEEEECchH
Confidence 344 24678999998772 23443 3445556653332 3 8888 445666777777776555 999987665
Q ss_pred hhHHh
Q psy5399 103 EFTKK 107 (156)
Q Consensus 103 ~~~~~ 107 (156)
.+...
T Consensus 190 ~~~~~ 194 (292)
T 2vc6_A 190 TALGY 194 (292)
T ss_dssp GHHHH
T ss_pred HHHHH
Confidence 55443
No 400
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=22.50 E-value=64 Score=20.43 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=31.4
Q ss_pred EEeeCCCCCC-----CCcCChhhHHHhHHHHHHcCCCEEEEEecC-CH------HHHHHHHHHcCCCcceE
Q psy5399 37 FGVPGAFTPG-----CSVTHLPGYLAKEKDLKAKGIHEIFCIAVN-DA------FVMEAWCRKNNAEGKIR 95 (156)
Q Consensus 37 ~f~~~~~cp~-----C~~~~l~~l~~~~~~~~~~~~~~v~~is~d-~~------~~~~~~~~~~~~~~~f~ 95 (156)
+|=|+-+|.. -..++|-++....+.++++|+. |-=.+.. .| ....++++++|... .|
T Consensus 6 ifepamCCstGvCG~~vd~~L~~~~~~~~~lk~~Gi~-V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~-LP 74 (110)
T 3kgk_A 6 VFDPAMAASTGVCGTDVDQALVDFSTDVQWLKQSGVQ-IERFNLAQQPMSFVQNEKVKAFIEASGAEG-LP 74 (110)
T ss_dssp EEECC-------------CHHHHHHHHHHHHHHHTCC-EEEEETTTCTTHHHHSHHHHHHHHHHCGGG-CC
T ss_pred EecchhccccCCcCCCCCHHHHHHHHHHHHHHHCCCe-EEEEccccChHHHhcCHHHHHHHHHcCccc-CC
Confidence 4446666542 3445577777788888888988 7655542 22 34567777776543 44
No 401
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=22.45 E-value=50 Score=23.78 Aligned_cols=16 Identities=25% Similarity=0.503 Sum_probs=13.5
Q ss_pred EEEEe-CCcEEEEEEcc
Q psy5399 126 SMVVD-DGKITQLNIEP 141 (156)
Q Consensus 126 ~~iid-~G~I~~~~~~~ 141 (156)
.|.|| +|+|..+.+..
T Consensus 169 ~f~Id~dG~V~~v~V~~ 185 (229)
T 2grx_C 169 KFDVTPDGRVDNVQILS 185 (229)
T ss_dssp EEECCTTSCCEEEEECC
T ss_pred EEEECCCCCEEEEEEEe
Confidence 78888 99999998754
No 402
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=22.42 E-value=1.2e+02 Score=24.07 Aligned_cols=39 Identities=8% Similarity=0.124 Sum_probs=31.8
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
+..|..+.+++++.|.. ++.+..+..+.+.+++++++..
T Consensus 56 ~~sL~~L~~~L~~~G~~-L~v~~g~~~~~l~~l~~~~~~~ 94 (484)
T 1owl_A 56 QGCLQELQQRYQQAGSR-LLLLQGDPQHLIPQLAQQLQAE 94 (484)
T ss_dssp HHHHHHHHHHHHHHTSC-EEEEESCHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHcCCC
Confidence 34567777888888999 8888877788889999998876
No 403
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=22.39 E-value=1.2e+02 Score=19.34 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=24.7
Q ss_pred hHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 58 KEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 58 ~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
..+.+++.|+. +..+|.++....+..+++.++.
T Consensus 39 ~l~~l~~~g~~-~~i~T~~~~~~~~~~~~~~gl~ 71 (164)
T 3e8m_A 39 GIFWAHNKGIP-VGILTGEKTEIVRRRAEKLKVD 71 (164)
T ss_dssp HHHHHHHTTCC-EEEECSSCCHHHHHHHHHTTCS
T ss_pred HHHHHHHCCCE-EEEEeCCChHHHHHHHHHcCCC
Confidence 35666777888 8888877777777788887775
No 404
>3vk8_A Probable formamidopyrimidine-DNA glycosylase; DNA glycosylase, hneil1 ortholog, DNA lesion, thymine glycol zincless finger; HET: DNA CTG; 2.00A {Acanthamoeba polyphaga mimivirus} PDB: 3vk7_A* 3a42_A 3a46_A* 3a45_A*
Probab=22.06 E-value=24 Score=26.36 Aligned_cols=9 Identities=11% Similarity=0.231 Sum_probs=6.7
Q ss_pred CCCCCCCcC
Q psy5399 42 AFTPGCSVT 50 (156)
Q Consensus 42 ~~cp~C~~~ 50 (156)
.|||.|+..
T Consensus 280 ~~CP~CQ~~ 288 (295)
T 3vk8_A 280 YWAPAIQKL 288 (295)
T ss_dssp EECTTTCBC
T ss_pred EECCCCCCC
Confidence 369999953
No 405
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=21.94 E-value=1.5e+02 Score=20.04 Aligned_cols=39 Identities=15% Similarity=0.047 Sum_probs=29.8
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
.|...++.+.+++.|+. +..+|..+....+...+..++.
T Consensus 96 ~~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 96 VPGARKVLIRLKELGYE-LGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CTTHHHHHHHHHHHTCE-EEEEECSCHHHHHHHHHHTTCG
T ss_pred CccHHHHHHHHHHCCCE-EEEEECCCchhHHHHHHHcCcH
Confidence 36777777788888888 8878877777777778888765
No 406
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=21.88 E-value=18 Score=24.81 Aligned_cols=26 Identities=8% Similarity=-0.141 Sum_probs=20.3
Q ss_pred EEEeeCCCCCCCCcCChhhHHHhHHHH
Q psy5399 36 IFGVPGAFTPGCSVTHLPGYLAKEKDL 62 (156)
Q Consensus 36 l~f~~~~~cp~C~~~~l~~l~~~~~~~ 62 (156)
|.+|...-||+|-. ..+.|.++.+++
T Consensus 3 I~~~~D~~CP~cy~-~~~~l~~~~~~~ 28 (203)
T 2imf_A 3 VDFYFDFLSPFSYL-ANQRLSKLAQDY 28 (203)
T ss_dssp EEEEECTTCHHHHH-HHHHHHHHHHHH
T ss_pred EEEEEeCCCHHHHH-HHHHHHHHHHHc
Confidence 44555778999996 468999988887
No 407
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=21.50 E-value=1.7e+02 Score=20.74 Aligned_cols=38 Identities=5% Similarity=-0.054 Sum_probs=29.9
Q ss_pred hhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 53 PGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 53 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
+...+..++++++|+. ++.+|.-+...++.+.++.++.
T Consensus 29 ~~~~~~l~~l~~~G~~-~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 29 QPAAPWLTRLREANVP-VILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CTTHHHHHHHHHTTCC-EEEECSSCHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHcCCC
Confidence 4455667777788998 8888888888888888888875
No 408
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=21.43 E-value=1.9e+02 Score=21.53 Aligned_cols=41 Identities=12% Similarity=0.031 Sum_probs=30.6
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecCCH
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVNDA 78 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d~~ 78 (156)
|-.++..+- | +....-.++.....+.+.|+.+|+++..|.+
T Consensus 82 g~~~v~Hlt----c---~~~~~~~l~~~L~~~~~~GI~nILaLrGDpp 122 (304)
T 3fst_A 82 GLEAAPHLT----C---IDATPDELRTIARDYWNNGIRHIVALRGDLP 122 (304)
T ss_dssp CCCEEEEEE----S---TTSCHHHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred CCCeeEEee----c---CCCCHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 556788774 4 3334578888888888999998999987754
No 409
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=21.29 E-value=1e+02 Score=20.43 Aligned_cols=59 Identities=12% Similarity=0.026 Sum_probs=41.1
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcc--eEEEecCC----------chhHHhhCCe
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGK--IRFLADPN----------LEFTKKLGVE 111 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~--f~~~~D~~----------~~~~~~~gv~ 111 (156)
.|...++.+.+++.|+. +..+|.......+...+..++..- ..+.+|.. ..+.+.+|+.
T Consensus 88 ~~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~ 158 (226)
T 3mc1_A 88 YDGIEALLSSLKDYGFH-LVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIK 158 (226)
T ss_dssp CTTHHHHHHHHHHHTCE-EEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcC
Confidence 47777888888888888 888888788888888888886532 33444432 2356677764
No 410
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=20.73 E-value=17 Score=22.29 Aligned_cols=35 Identities=9% Similarity=0.082 Sum_probs=23.4
Q ss_pred CCCceeehhhHhCCCeEEEEEeeCCCCCCCCcCChhhHH
Q psy5399 18 TPQTKIQIADAIKGKKVIIFGVPGAFTPGCSVTHLPGYL 56 (156)
Q Consensus 18 ~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~l~~l~ 56 (156)
.||+.+.|-+ +++..+.|.+- |+ |..|... .-.|.
T Consensus 32 ~dGGdvelv~-v~~g~V~v~l~-Ga-C~gC~ss-~~Tlk 66 (92)
T 1veh_A 32 EDGGDVIYRG-FEDGIVRLKLQ-GS-CTSCPSS-IITLK 66 (92)
T ss_dssp HHSCCCCEEE-EETTEEEECCC-CC-CCCCHHH-HHHTH
T ss_pred hcCCeEEEEE-EeCCEEEEEEe-ec-CCCCCCc-HHHHH
Confidence 4788888888 57765666653 54 8889853 34454
No 411
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=20.73 E-value=2.3e+02 Score=20.93 Aligned_cols=53 Identities=9% Similarity=0.122 Sum_probs=33.9
Q ss_pred HhHHHHHHcCCCEEEEEec-------CCHHHHHHHHHHcCCCcceEEEecCCchhHHhhCCe
Q psy5399 57 AKEKDLKAKGIHEIFCIAV-------NDAFVMEAWCRKNNAEGKIRFLADPNLEFTKKLGVE 111 (156)
Q Consensus 57 ~~~~~~~~~~~~~v~~is~-------d~~~~~~~~~~~~~~~~~f~~~~D~~~~~~~~~gv~ 111 (156)
.+.+..++.+++++.++.. |..+-+++..++.|++ +.+++..+..-...+|+.
T Consensus 64 ~f~~~~~~~~v~~v~~vATsA~R~A~N~~~fl~~i~~~tG~~--i~vIsG~eEA~l~~~gv~ 123 (315)
T 3mdq_A 64 KFRVILDEHAVVHVIATGTSAVRSGSNKQVLIDRIKKEVNID--VEVIDGAREAELIFRGVQ 123 (315)
T ss_dssp HHHHHHHHTTCCEEEEEECHHHHHCTTHHHHHHHHHHHHCCC--EEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeeHHHHcCcCHHHHHHHHHHHHCCC--eEEeCHHHHHHHHHHHHH
Confidence 3334445557776777754 3456667777788999 999998764443344443
No 412
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.72 E-value=69 Score=18.45 Aligned_cols=13 Identities=23% Similarity=0.358 Sum_probs=10.6
Q ss_pred EEEEe-CCcEEEEE
Q psy5399 126 SMVVD-DGKITQLN 138 (156)
Q Consensus 126 ~~iid-~G~I~~~~ 138 (156)
.+++| +|+|+++.
T Consensus 20 i~~~D~~g~I~~~N 33 (115)
T 3b33_A 20 TLILDDGLAIRYAN 33 (115)
T ss_dssp EEEECTTCBEEEEC
T ss_pred EEEECCCCcEEEEC
Confidence 56778 99999874
No 413
>1j8b_A YBAB; hypothetical protein, structural genomics, structure function project, S2F, unknown function; HET: MSE; 1.75A {Haemophilus influenzae RD} SCOP: d.222.1.1 PDB: 1pug_A
Probab=20.72 E-value=66 Score=20.30 Aligned_cols=29 Identities=10% Similarity=0.330 Sum_probs=20.7
Q ss_pred EEEEe-CCcEEEEEEccCCCceeecchhhh
Q psy5399 126 SMVVD-DGKITQLNIEPDGTGLTCSLVDEL 154 (156)
Q Consensus 126 ~~iid-~G~I~~~~~~~~~~~~~~~~~~~~ 154 (156)
++.++ +|.|+.+.++|+-.+.+...++.+
T Consensus 46 ~Vt~~G~~ev~~i~Idp~~~~~d~E~Ledl 75 (112)
T 1j8b_A 46 KITINGAHNCRRIDIDPSLMEDDKEMLEDL 75 (112)
T ss_dssp EEEEETTCCEEEEEECGGGGGSCHHHHHHH
T ss_pred EEEEecCceEEEEEECHHHHhCCHHHHHHH
Confidence 57777 999999999998765333334433
No 414
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=20.54 E-value=1.6e+02 Score=22.70 Aligned_cols=43 Identities=9% Similarity=-0.125 Sum_probs=35.2
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCCcceE
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAEGKIR 95 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~f~ 95 (156)
.|...++.+.+++.|+. +..+|..+....+...+.+++..-|.
T Consensus 217 ~pGv~elL~~Lk~~Gi~-laIvTn~~~~~~~~~L~~lgL~~~Fd 259 (384)
T 1qyi_A 217 VDEVKVLLNDLKGAGFE-LGIATGRPYTETVVPFENLGLLPYFE 259 (384)
T ss_dssp HHHHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHHTCGGGSC
T ss_pred CcCHHHHHHHHHhCCCE-EEEEeCCcHHHHHHHHHHcCChHhcC
Confidence 68899999999999998 88888888888888888888753354
No 415
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=20.52 E-value=1.2e+02 Score=24.41 Aligned_cols=39 Identities=10% Similarity=0.223 Sum_probs=31.8
Q ss_pred hhhHHHhHHHHHHcCCCEEEEEecCCHHHHHHHHHHcCCC
Q psy5399 52 LPGYLAKEKDLKAKGIHEIFCIAVNDAFVMEAWCRKNNAE 91 (156)
Q Consensus 52 l~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 91 (156)
+..|.++.+++++.|.. ++.+..+..+.+.+++++++..
T Consensus 99 ~~sL~~L~~~L~~~G~~-L~v~~g~~~~~l~~l~~~~~~~ 137 (525)
T 2j4d_A 99 MECLVDLRKNLMKRGLN-LLIRSGKPEEILPSLAKDFGAR 137 (525)
T ss_dssp HHHHHHHHHHHHHTTCC-CEEEESCHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHcCCC
Confidence 34577788888999999 8888777788888999988876
No 416
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=20.32 E-value=1.9e+02 Score=21.07 Aligned_cols=41 Identities=17% Similarity=0.112 Sum_probs=28.5
Q ss_pred CCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHH-HcCCCEEEEEe
Q psy5399 31 GKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLK-AKGIHEIFCIA 74 (156)
Q Consensus 31 gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~-~~~~~~v~~is 74 (156)
..++||++..+.||.... . ...+..+.+.+. +.|+. |+++.
T Consensus 112 ~~p~vv~~HGgg~~~g~~-~-~~~~~~~~~~la~~~g~~-vv~~d 153 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSA-N-SAIYDTLCRRLVGLCKCV-VVSVN 153 (351)
T ss_dssp SCEEEEEECCSTTTSCCT-T-BHHHHHHHHHHHHHHTSE-EEEEC
T ss_pred CceEEEEECCCcCcCCCC-c-chhHHHHHHHHHHHcCCE-EEEec
Confidence 347888888777776655 2 245667777776 67887 87774
No 417
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=20.22 E-value=76 Score=23.18 Aligned_cols=83 Identities=13% Similarity=0.127 Sum_probs=49.7
Q ss_pred CCCcCCcceecccCCCceeehhhHh-----CCCeEEEEEeeCCCCCCCCcCChhhHHHhHHHHHHcCCCEEEEEecC---
Q psy5399 5 VGDTLPDALLHENTPQTKIQIADAI-----KGKKVIIFGVPGAFTPGCSVTHLPGYLAKEKDLKAKGIHEIFCIAVN--- 76 (156)
Q Consensus 5 ~G~~~P~f~l~~~~~g~~~~l~~~~-----~gk~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~~~~v~~is~d--- 76 (156)
.|++ | .-+. |.||..++-+-++ .++..-.-.| ..|..-+....+|...++.+.+++.|+. ++.||.-
T Consensus 55 ~g~~-~-avVf-DIDgTlldn~~y~~~~~~~~~~f~~~~w-~~wv~~g~~~~~pg~~ell~~L~~~G~~-i~ivTgR~~~ 129 (260)
T 3pct_A 55 KGKK-K-AVVV-DLDETMIDNSAYAGWQVQSGQGFSPKTW-TKWVDARQSAAIPGAVEFSNYVNANGGT-MFFVSNRRDD 129 (260)
T ss_dssp ---C-E-EEEE-CCBTTTEECHHHHHHHHHHTCCCCHHHH-HHHHHTTCCEECTTHHHHHHHHHHTTCE-EEEEEEEETT
T ss_pred CCCC-C-EEEE-ECCccCcCChhHHHhhcccCCCCCHHHH-HHHHHcCCCCCCccHHHHHHHHHHCCCe-EEEEeCCCcc
Confidence 3444 4 4455 6888877766432 2222100011 1122222223468889999999999999 8888742
Q ss_pred -CHHHHHHHHHHcCCCc
Q psy5399 77 -DAFVMEAWCRKNNAEG 92 (156)
Q Consensus 77 -~~~~~~~~~~~~~~~~ 92 (156)
..+....++++.|++.
T Consensus 130 ~~r~~T~~~L~~lGi~~ 146 (260)
T 3pct_A 130 VEKAGTVDDMKRLGFTG 146 (260)
T ss_dssp TSHHHHHHHHHHHTCCC
T ss_pred ccHHHHHHHHHHcCcCc
Confidence 4578889999999883
No 418
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=20.22 E-value=75 Score=19.81 Aligned_cols=13 Identities=31% Similarity=0.521 Sum_probs=10.8
Q ss_pred EEEEe-CCcEEEEE
Q psy5399 126 SMVVD-DGKITQLN 138 (156)
Q Consensus 126 ~~iid-~G~I~~~~ 138 (156)
.+++| +|+|+++.
T Consensus 20 i~~~D~~g~I~~~N 33 (129)
T 3mfx_A 20 MILVNANGFIRSCN 33 (129)
T ss_dssp EEEEETTSBEEEEC
T ss_pred EEEECCCCEEEeEh
Confidence 67778 99999984
No 419
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=20.21 E-value=1.3e+02 Score=17.10 Aligned_cols=27 Identities=4% Similarity=-0.025 Sum_probs=21.3
Q ss_pred EEEecCCHHHHHHHHHHcCCCcceEEEec
Q psy5399 71 FCIAVNDAFVMEAWCRKNNAEGKIRFLAD 99 (156)
Q Consensus 71 ~~is~d~~~~~~~~~~~~~~~~~f~~~~D 99 (156)
+.|+++.....+++.+.+++. |.++.+
T Consensus 43 i~V~p~~~~~f~~~L~~~~i~--~~v~i~ 69 (79)
T 1vjq_A 43 ILIPSDMVEWFLEMLKAKGIP--FTVYVE 69 (79)
T ss_dssp EEECGGGHHHHHHHHHHTTCC--EEEEEE
T ss_pred EEECHHHHHHHHHHHHHCCCc--EEEEeh
Confidence 457777778888888999988 887764
Done!