BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5402
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XIC0|ECI2_RAT Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus
GN=Eci2 PE=1 SV=1
Length = 391
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 117/183 (63%), Gaps = 12/183 (6%)
Query: 16 SITLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATF 75
+I L+++V FID+PKPL+A+VNGPA+GIS T L L D V+ASD +ATF
Sbjct: 218 AIVLREFVNTFIDFPKPLVAVVNGPAVGISVTLLGLFDAVYASD------------RATF 265
Query: 76 HTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIER 135
HTPF+ G +PE CSS FP++ G++ A+E+L G+KL A+EA G V+ VF E
Sbjct: 266 HTPFSHLGQSPEACSSYTFPKMMGSAKAAEMLLFGKKLTAREAWAQGLVTEVFPESTFET 325
Query: 136 DLWPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFF 195
++W R+ +AKLPP SM +K+L+R LH N+ EC L RW SEE +NAI +F
Sbjct: 326 EVWTRLKTYAKLPPNSMRISKELIRKNEKEKLHAVNEEECTTLRARWLSEECINAIMSFV 385
Query: 196 NRK 198
RK
Sbjct: 386 TRK 388
>sp|Q9WUR2|ECI2_MOUSE Enoyl-CoA delta isomerase 2, mitochondrial OS=Mus musculus GN=Eci2
PE=1 SV=2
Length = 391
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 120/186 (64%), Gaps = 12/186 (6%)
Query: 13 TDTSITLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQ 72
++ ++ L+ +V +FID+PKPL+A+VNGPA+GIS T L L D VFASD +
Sbjct: 215 SNGAVLLRDFVNSFIDFPKPLVAVVNGPAVGISVTLLGLFDAVFASD------------R 262
Query: 73 ATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEE 132
ATFHTPF+ G +PE CSS FP++ G++ A+E+L G+KL A+EA G V+ VF
Sbjct: 263 ATFHTPFSQLGQSPEACSSYTFPKMMGSAKAAEMLLFGKKLTAREAWAQGLVTEVFPEST 322
Query: 133 IERDLWPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAIT 192
E ++W R+ +AKLPP +M +K+L+R L+ N EC L+ RW SEE MNAI
Sbjct: 323 FETEVWTRLKTYAKLPPNAMRISKELIRKNEKEKLYAVNAEECTTLQARWLSEECMNAIM 382
Query: 193 AFFNRK 198
+F +RK
Sbjct: 383 SFVSRK 388
>sp|O75521|ECI2_HUMAN Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2
PE=1 SV=4
Length = 394
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 120/194 (61%), Gaps = 12/194 (6%)
Query: 5 PTDLINEDTDTSITLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILL 64
P + + + ++ L+++V FID+PKPLIA+VNGPA+GIS T L L D V+ASD
Sbjct: 210 PGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASD----- 264
Query: 65 NHPVFVLQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFV 124
+ATFHTPF+ G +PEGCSS FP+I + A+E+L G+KL A EA G V
Sbjct: 265 -------RATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 317
Query: 125 SGVFTTEEIERDLWPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWES 184
+ VF ++++W R+ A+AKLPP ++ +K+++R LH N EC L+ RW S
Sbjct: 318 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 377
Query: 185 EEFMNAITAFFNRK 198
+E NA+ F +RK
Sbjct: 378 DECTNAVVNFLSRK 391
>sp|Q9WTK2|CDYL_MOUSE Chromodomain Y-like protein OS=Mus musculus GN=Cdyl PE=1 SV=1
Length = 593
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 114/192 (59%), Gaps = 12/192 (6%)
Query: 7 DLINEDTDTSITLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNH 66
D E T + ++ +V FI + KP+I VNGPAIG+ A+ L LCD+V+A++
Sbjct: 410 DRKRESTKMADAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANE------- 462
Query: 67 PVFVLQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSG 126
+A F TP+T G +P+GCS+V+FP+I G + A+E+L++GRKL AQEA G VS
Sbjct: 463 -----KAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLFSGRKLTAQEACGKGLVSQ 517
Query: 127 VFTTEEIERDLWPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEE 186
VF +++ RI A P + +K LVR M L +AN+REC+ L++ W S +
Sbjct: 518 VFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQ 577
Query: 187 FMNAITAFFNRK 198
M+++ + RK
Sbjct: 578 GMDSMLKYLQRK 589
>sp|Q9Y232|CDYL1_HUMAN Chromodomain Y-like protein OS=Homo sapiens GN=CDYL PE=1 SV=2
Length = 598
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 12/192 (6%)
Query: 7 DLINEDTDTSITLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNH 66
D E T + ++ +V FI + KP+I VNGPAIG+ A+ L LCD+V+A++
Sbjct: 415 DRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANE------- 467
Query: 67 PVFVLQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSG 126
+A F TP+T G +P+GCS+V+FP+I G + A+E+L +GRKL AQEA G VS
Sbjct: 468 -----KAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQ 522
Query: 127 VFTTEEIERDLWPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEE 186
VF +++ RI A P + +K LVR M L +AN+REC+ L++ W S +
Sbjct: 523 VFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQ 582
Query: 187 FMNAITAFFNRK 198
M+++ + RK
Sbjct: 583 GMDSMLKYLQRK 594
>sp|Q6AYK9|CDYL_RAT Chromodomain Y-like protein OS=Rattus norvegicus GN=Cdyl PE=2 SV=1
Length = 589
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 112/192 (58%), Gaps = 12/192 (6%)
Query: 7 DLINEDTDTSITLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNH 66
D E T + ++ +V FI + KP+I VNGPAIG+ A+ L LCD+V+A++
Sbjct: 406 DRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANE------- 458
Query: 67 PVFVLQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSG 126
+A F TP+T G +P+GCS+V+FP+I G + A+E+L +GRKL AQEA G VS
Sbjct: 459 -----KAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQ 513
Query: 127 VFTTEEIERDLWPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEE 186
VF +++ RI A P + +K LVR M L +AN+REC L++ W S +
Sbjct: 514 VFWPGTFTQEVMVRIKELASCNPIVLEESKALVRCNMKMELEQANERECDALKKIWGSAQ 573
Query: 187 FMNAITAFFNRK 198
M+++ + RK
Sbjct: 574 GMDSMLKYLQRK 585
>sp|Q9Y6F8|CDY1_HUMAN Testis-specific chromodomain protein Y 1 OS=Homo sapiens GN=CDY1
PE=1 SV=1
Length = 540
Score = 130 bits (326), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 12/181 (6%)
Query: 18 TLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHT 77
T++ +V FI + KP++ VNGPAIG+ A+ L LCD+V+A++ +A F T
Sbjct: 368 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANE------------KAWFQT 415
Query: 78 PFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDL 137
P+T G +P+GCSS+ FP++ G + A+E+L GRKL A+EA G VS VF T +++
Sbjct: 416 PYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEV 475
Query: 138 WPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNR 197
+I A P + K LVR + L +AN+REC+ L + W S + + ++ +
Sbjct: 476 MIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVEN 535
Query: 198 K 198
K
Sbjct: 536 K 536
>sp|Q8N8U2|CDYL2_HUMAN Chromodomain Y-like protein 2 OS=Homo sapiens GN=CDYL2 PE=1 SV=2
Length = 506
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 12/193 (6%)
Query: 6 TDLINEDTDTSITLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLN 65
+D E T + ++ +V AFI + KP++ +NGPA+G+ A+ L LCDIV+AS+
Sbjct: 322 SDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASE------ 375
Query: 66 HPVFVLQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVS 125
+A F TP+ +TP GCSS FP+I G ++A+E+L+ GRKL AQEA G VS
Sbjct: 376 ------KAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLVS 429
Query: 126 GVFTTEEIERDLWPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESE 185
VF +++ R+ A + +K LVR + S+L + N++EC L++ W S
Sbjct: 430 QVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSS 489
Query: 186 EFMNAITAFFNRK 198
+ ++++ ++ K
Sbjct: 490 KGLDSLFSYLQDK 502
>sp|Q9Y6F7|CDY2_HUMAN Testis-specific chromodomain protein Y 2 OS=Homo sapiens GN=CDY2A
PE=1 SV=1
Length = 541
Score = 127 bits (318), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 104/181 (57%), Gaps = 12/181 (6%)
Query: 18 TLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHT 77
T++ +V FI + KP++ VNGPAIG+ A+ L LCD+V+A++ +A F T
Sbjct: 369 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANE------------KAWFQT 416
Query: 78 PFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDL 137
P+T G +P+GCSS+ FP++ G + A+E+L GRKL A+EA G VS VF T +++
Sbjct: 417 PYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEV 476
Query: 138 WPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNR 197
+I A + K LVR + L +AN+REC+ L + W S + + ++ +
Sbjct: 477 MIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVEN 536
Query: 198 K 198
K
Sbjct: 537 K 537
>sp|P41942|YKB4_CAEEL Uncharacterized protein B0272.4 OS=Caenorhabditis elegans
GN=B0272.4 PE=3 SV=1
Length = 255
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 YVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTL 81
+V I +PKP+IA+VNG A+G+S T L + D V A DTA TF TPF
Sbjct: 87 FVDILIAFPKPIIALVNGHAVGVSVTMLGVMDAVIAIDTA------------TFATPFAD 134
Query: 82 RGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRI 141
G+ PE CSS PRI G+ A+ L+ K A EA G V+ + E+D I
Sbjct: 135 IGVCPEACSSYTLPRIMGHQKAAALMMFSEKFTAHEAHIAGLVTQILPAATFEKDAKKII 194
Query: 142 HAWAKLPPQSMIFAKQLVRVPMLS-MLHEANKRECKRLEERWESEEFMNAITAFFNR 197
++KL P +M AK+L+R + L N++E L + E+ + +TA F +
Sbjct: 195 DRYSKLSPITMKVAKELMRTTQIKDELLTVNRKEQVHLNGMFSHEDTIARLTAKFVK 251
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 31 KPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCS 90
KP+IA VNG A+G +CDI++A + +A F P L G P
Sbjct: 128 KPVIAAVNGYALGGGCELAMMCDIIYAGE------------KAQFGQPEILLGTIPGAGG 175
Query: 91 SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPPQ 150
+ R G S+A E++ TG +++AQ+A Q G VS +F E++ + I K+
Sbjct: 176 TQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVEKL---VEEAIQCAEKIASN 232
Query: 151 SMI---FAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
S I AK+ V L E NK E + + +++ +TAF ++
Sbjct: 233 SKIVVAMAKESVNAAFEMTLTEGNKLEKRLFYSTFATDDRREGMTAFVEKR 283
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 31 KPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCS 90
KP+IA VNG A+G +CDI++A + +A F P L G P
Sbjct: 128 KPVIAAVNGYALGGGCELAMMCDIIYAGE------------KAQFGQPEILLGTIPGAGG 175
Query: 91 SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPPQ 150
+ R G S+A E++ TG +++AQ+A Q G VS +F E + + I K+
Sbjct: 176 TQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETL---VEEAIQCAEKIANN 232
Query: 151 SMI---FAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
S I AK+ V L E NK E K + +++ ++AF ++
Sbjct: 233 SKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKR 283
>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1
Length = 290
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 26/194 (13%)
Query: 16 SITLQK-YVAAFIDY-------PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHP 67
S+T Q Y F+ + KP+IA VNG A+G +CDI++A +
Sbjct: 105 SLTFQNCYSGGFLSHWDQLTRVKKPVIAAVNGYALGGGCELAMMCDIIYAGE-------- 156
Query: 68 VFVLQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGV 127
+A F P L G P + R G S+A E++ TG +++AQ+A Q G VS +
Sbjct: 157 ----KAQFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKI 212
Query: 128 FTTEEIERDLWPRIHAWAKLPPQSMI---FAKQLVRVPMLSMLHEANKRECKRLEERWES 184
F E + + I K+ S I AK+ V L E K E K + +
Sbjct: 213 FPVETVVEEA---IQCAEKIASNSKIVTAMAKESVNAAFEMTLAEGVKLEKKLFYSTFAT 269
Query: 185 EEFMNAITAFFNRK 198
E+ + AF ++
Sbjct: 270 EDRKEGMAAFVEKR 283
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 31 KPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCS 90
KP+IA VNG A G +CDI++A + +A F P L G P
Sbjct: 128 KPVIAAVNGYAFGGGCELAMMCDIIYAGE------------KAQFAQPEILIGTIPGAGG 175
Query: 91 SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPPQ 150
+ R G S+A E++ TG +++AQ+A Q G VS + E + + I K+
Sbjct: 176 TQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEA---IQCAEKIASN 232
Query: 151 SMI---FAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
S I AK+ V L E +K E K + +++ +TAF ++
Sbjct: 233 SKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKR 283
>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2
SV=1
Length = 290
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 31 KPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCS 90
KP+IA VNG A G +CDI++A + +A F P L G P
Sbjct: 128 KPVIAAVNGYAFGGGCELAMMCDIIYAGE------------KAQFAQPEILIGTIPGAGG 175
Query: 91 SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPPQ 150
+ R G S+A E++ TG +++AQ+A Q G VS + E + + I K+
Sbjct: 176 TQRLTRTVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEA---IQCAEKIASN 232
Query: 151 SMI---FAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
S I AK+ V L E +K E K + + + +TAF ++
Sbjct: 233 SKIIAAMAKESVNAAFEMTLAEGSKLEKKLFYSTFATNDRKEGMTAFVEKR 283
>sp|A0PJR5|ECHD3_DANRE Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Danio rerio GN=echdc3 PE=2 SV=2
Length = 289
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 17/109 (15%)
Query: 28 DYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPE 87
D P P+IA+VNG A +A CD+ AS+ ++TF TP G+
Sbjct: 120 DLPVPVIAMVNGVATAAGCQLVASCDVAVASE------------KSTFATPGVNVGLF-- 165
Query: 88 GCSS--VLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIE 134
CS+ V R +A ++L TGR L+AQ+ALQ+G +S VF+ E +E
Sbjct: 166 -CSTPAVAIGRTVPRKIAMQMLLTGRPLSAQQALQHGLLSAVFSEERLE 213
>sp|P76082|PAAF_ECOLI 2,3-dehydroadipyl-CoA hydratase OS=Escherichia coli (strain K12)
GN=paaF PE=1 SV=1
Length = 255
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 29 YPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEG 88
+ KPLIA VNG A+G LCD+V A + A F P G+ P
Sbjct: 91 FNKPLIAAVNGYALGAGCELALLCDVVVAGEN------------ARFGLPEITLGIMPGA 138
Query: 89 CSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLP 148
+ R G S+AS+++ +G + AQ+A Q G VS VF ++ A+
Sbjct: 139 GGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHS 198
Query: 149 PQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
P ++ AKQ +R L +E + +E+ I+AF ++
Sbjct: 199 PLALQAAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKR 248
>sp|Q05871|ECI1_YEAST 3,2-trans-enoyl-CoA isomerase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ECI1 PE=1 SV=1
Length = 280
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 23/171 (13%)
Query: 25 AFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGM 84
AFI + K LI +NGPAIG+SA +ALCDIV++ +N V++L PF G+
Sbjct: 107 AFIKHSKVLICCLNGPAIGLSAALVALCDIVYS------INDKVYLLY-----PFANLGL 155
Query: 85 TPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFT---------TEEIER 135
EG ++V P FG + E L + + GF+S F ++
Sbjct: 156 ITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLE 215
Query: 136 DLWPRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEE 186
+L ++ LP S + K+L++ + ++AN E + W E
Sbjct: 216 ELREKVKGLY-LP--SCLGMKKLLKSNHIDAFNKANSVEVNESLKYWVDGE 263
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 16 SITLQKYVAAFID-YPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQAT 74
S++L + AA +D P+P+IA +NG A+G CD+ A++ A+L
Sbjct: 82 SVSLIQRTAALLDALPQPVIAAINGSALGGGLELALACDLRIATEAAVL----------- 130
Query: 75 FHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIE 134
P T + P + PR+ G A E +YTGR++ A EA + G V V
Sbjct: 131 -GLPETGLAIIPGAGGTQRLPRLIGRGKAKEFIYTGRRVTAHEAKEIGLVEHVTAP---- 185
Query: 135 RDLWPRIHAWA 145
DL P+ A
Sbjct: 186 CDLMPKAEELA 196
>sp|Q3MIE0|ECHD3_RAT Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Rattus norvegicus GN=Echdc3 PE=2 SV=1
Length = 300
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 28 DYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPE 87
++P P++A+VNG A +A CDI ASD +++F TP G+
Sbjct: 137 NHPVPIVAMVNGLATAAGCQLVASCDIAVASD------------KSSFATPGVNVGLF-- 182
Query: 88 GCS--SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERD 136
CS +V R VA E+L+TG ++AQEAL++G +S V E++E +
Sbjct: 183 -CSTPAVALGRAVPRKVALEMLFTGEPISAQEALRHGLISKVVPEEQLEEE 232
>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis
elegans GN=ech-6 PE=1 SV=1
Length = 288
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 12/174 (6%)
Query: 25 AFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGM 84
A D KP+IA VNG A+G +CDI++A + +A F P G
Sbjct: 120 AVSDVKKPVIAAVNGFALGGGNELAMMCDIIYAGE------------KARFGQPEINIGT 167
Query: 85 TPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAW 144
P + + R G S A E+ TG + AQEA ++G VS +F +++ +
Sbjct: 168 IPGAGGTQRWARAAGKSFAMEVCLTGNHVTAQEAKEHGIVSKIFPADQVVGEAVKLGEKI 227
Query: 145 AKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
A P + AK+ V L E E + + +++ +TAF ++
Sbjct: 228 ADQSPLIVQMAKEAVNKAYELTLQEGLHFERRLFHATFATKDRKEGMTAFAEKR 281
>sp|Q9D7J9|ECHD3_MOUSE Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Mus musculus GN=Echdc3 PE=2 SV=1
Length = 300
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 28 DYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPE 87
++P P++A+VNG A +A CDI ASD +++F TP G+
Sbjct: 137 NHPVPILAMVNGLATAAGCQLVASCDIAVASD------------KSSFATPGVNVGLF-- 182
Query: 88 GCS--SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERD 136
CS +V R VA E+L+TG ++AQEAL++G +S V E++E +
Sbjct: 183 -CSTPAVALGRAVPRKVALEMLFTGEPISAQEALRHGLISKVVPEEQLEAE 232
>sp|Q4L549|MENB_STAHJ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=menB PE=3 SV=1
Length = 272
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA+V G AIG +CD+ A+D AI F G G
Sbjct: 106 PKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 153
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
S RI G+ A E+ Y R+ NAQEAL G V+ V ++IE + K P
Sbjct: 154 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLDQIEDETVQWCKEIMKHSP 213
Query: 150 QSMIFAK 156
++ F K
Sbjct: 214 TALRFLK 220
>sp|Q8NXA0|MENB_STAAW 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MW2) GN=menB PE=3 SV=1
Length = 273
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA+V G A+G +CD+ A+D AI F G G
Sbjct: 107 PKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 154
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
S RI G+ A E+ Y R+ NAQEAL G V+ V E++E + K P
Sbjct: 155 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSP 214
Query: 150 QSMIFAK 156
++ F K
Sbjct: 215 TALRFLK 221
>sp|Q6GAG7|MENB_STAAS 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MSSA476) GN=menB PE=3 SV=1
Length = 273
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA+V G A+G +CD+ A+D AI F G G
Sbjct: 107 PKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 154
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
S RI G+ A E+ Y R+ NAQEAL G V+ V E++E + K P
Sbjct: 155 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSP 214
Query: 150 QSMIFAK 156
++ F K
Sbjct: 215 TALRFLK 221
>sp|Q6GI37|MENB_STAAR 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MRSA252) GN=menB PE=3 SV=1
Length = 273
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA+V G A+G +CD+ A+D AI F G G
Sbjct: 107 PKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 154
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
S RI G+ A E+ Y R+ NAQEAL G V+ V E++E + K P
Sbjct: 155 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSP 214
Query: 150 QSMIFAK 156
++ F K
Sbjct: 215 TALRFLK 221
>sp|Q5HH38|MENB_STAAC 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain COL) GN=menB PE=1 SV=1
Length = 273
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA+V G A+G +CD+ A+D AI F G G
Sbjct: 107 PKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 154
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
S RI G+ A E+ Y R+ NAQEAL G V+ V E++E + K P
Sbjct: 155 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSP 214
Query: 150 QSMIFAK 156
++ F K
Sbjct: 215 TALRFLK 221
>sp|Q8CPQ4|MENB_STAES 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1
Length = 272
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA+V G AIG +CD+ A+D AI F G G
Sbjct: 106 PKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 153
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIE 134
S RI G+ A E+ Y R+ NAQEAL G V+ V E++E
Sbjct: 154 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQVE 198
>sp|Q5HQC3|MENB_STAEQ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3
SV=1
Length = 272
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA+V G AIG +CD+ A+D AI F G G
Sbjct: 106 PKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 153
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIE 134
S RI G+ A E+ Y R+ NAQEAL G V+ V E++E
Sbjct: 154 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQVE 198
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 12/168 (7%)
Query: 31 KPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCS 90
KP+IA VNG A+G CDI AS A F P G+TP
Sbjct: 98 KPVIAAVNGFALGGGCEIAMSCDIRIASSNA------------RFGQPEVGLGITPGFGG 145
Query: 91 SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPPQ 150
+ R+ G +A +L++T + + A EAL+ G V+ V E+ + P
Sbjct: 146 TQRLSRLVGMGMAKQLIFTAQNIKADEALRIGLVNKVVEPSELMNTAKEIANKIVSNAPV 205
Query: 151 SMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
++ +KQ + M + A E + E + +E+ +A+TAF ++
Sbjct: 206 AVKLSKQAINRGMQCDIDTALAFESEAFGECFSTEDQKDAMTAFIEKR 253
>sp|Q49WG8|MENB_STAS1 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=menB PE=3 SV=1
Length = 272
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP++A+V G AIG +CD+ A+D AI F G G
Sbjct: 106 PKPVVAMVRGYAIGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 153
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
S RI G+ A E+ Y R+ NAQEAL G V+ V +++E + + P
Sbjct: 154 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLDQVEDETVQWCQEMKQHSP 213
Query: 150 QSMIFAK 156
++ F K
Sbjct: 214 TALRFLK 220
>sp|Q7A6A9|MENB_STAAN 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain N315) GN=menB PE=1 SV=1
Length = 273
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA+V G A+G +CD+ A+D AI F G G
Sbjct: 107 PKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 154
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
S RI G+ A E+ Y R+ NAQEAL G V+ V +++E + K P
Sbjct: 155 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLDKVEDETVQWCKEIMKHSP 214
Query: 150 QSMIFAK 156
++ F K
Sbjct: 215 TALRFLK 221
>sp|Q99V48|MENB_STAAM 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=menB PE=1 SV=1
Length = 273
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA+V G A+G +CD+ A+D AI F G G
Sbjct: 107 PKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAI------------FGQTGPKVGSFDAGY 154
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
S RI G+ A E+ Y R+ NAQEAL G V+ V +++E + K P
Sbjct: 155 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLDKVEDETVQWCKEIMKHSP 214
Query: 150 QSMIFAK 156
++ F K
Sbjct: 215 TALRFLK 221
>sp|P23966|MENB_BACSU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Bacillus subtilis (strain
168) GN=menB PE=1 SV=2
Length = 271
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP++A+V+G AIG +CD+ A+D AI F G G
Sbjct: 105 PKPVVAMVSGYAIGGGHVLHIVCDLTIAADNAI------------FGQTGPKVGSFDAGY 152
Query: 90 SSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
S RI G+ A E+ Y R+ NAQEAL G V+ V E++E + + P
Sbjct: 153 GSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQLEEETIKWCEEMLEKSP 212
Query: 150 QSMIFAK 156
++ F K
Sbjct: 213 TALRFLK 219
>sp|Q96DC8|ECHD3_HUMAN Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Homo sapiens GN=ECHDC3 PE=1 SV=2
Length = 303
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 18 TLQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHT 77
T K + ++P P+IA+VNG A +A CDI ASD +++F T
Sbjct: 127 TCSKVMMHIRNHPVPVIAMVNGLAAAAGCQLVASCDIAVASD------------KSSFAT 174
Query: 78 PFTLRGMTPEGCSS--VLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIER 135
P G+ CS+ V R VA E+L+TG ++AQEAL +G +S V E++
Sbjct: 175 PGVNVGLF---CSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQE 231
Query: 136 D 136
+
Sbjct: 232 E 232
>sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=echs1 PE=3 SV=1
Length = 277
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 14/169 (8%)
Query: 31 KPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCS 90
KP+IA VNG A+G +CDI+ A + A+ F P G P GC
Sbjct: 115 KPIIAAVNGYALGGGCELAMMCDIIIAGEKAV------------FGQPEIKLGTIP-GCG 161
Query: 91 SVL-FPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPP 149
R G S A EL+ TG L A EA + G VS V EE+ + A
Sbjct: 162 GTQRLIRAIGKSKAMELVLTGNNLTAVEAEKAGLVSKVVPVEELLTEATKMAEKIASYSQ 221
Query: 150 QSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
++ AK+ V L E + E + + + + + AF ++
Sbjct: 222 LTVAMAKEAVNASYELTLQEGIRFERRMFHSTFGTHDQKEGMNAFVEKR 270
>sp|P52045|SCPB_ECOLI Methylmalonyl-CoA decarboxylase OS=Escherichia coli (strain K12)
GN=scpB PE=1 SV=1
Length = 261
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 29 YPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEG 88
+PKP+I++V G G + + D++ A+ T+ PV P+ L G+
Sbjct: 95 FPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPV-----NLGVPYNLVGIHN-- 147
Query: 89 CSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLP 148
R G + EL++T + AQ AL G ++ V EE+E H ++
Sbjct: 148 -----LTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKA 202
Query: 149 PQSMIFAKQLVRVPMLSMLHEANKRECKRLEER----WESEEFMNAITAFFNRK 198
P ++ K+ +RV L H N E +R++ ++SE++ + AF ++
Sbjct: 203 PLAIAVIKEELRV--LGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKR 254
>sp|P94549|FADB_BACSU Probable enoyl-CoA hydratase OS=Bacillus subtilis (strain 168)
GN=fadB PE=2 SV=1
Length = 258
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 20 QKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPF 79
Q+ + +PKP+IA ++G A+G C I A++ A L P
Sbjct: 84 QQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKL------------GLPE 131
Query: 80 TLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVS-GVFTTEEIERDLW 138
G+ P + PR G + A EL+ +G ++ +EAL G VS G E+
Sbjct: 132 LNLGIIPGFAGTQRLPRYVGTAKALELIGSGEPISGKEALDLGLVSIGAKDEAEVIEKAK 191
Query: 139 PRIHAWAKLPPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
+A+ PQ++ +L+ + + K E KR E +ESE+ I AF ++
Sbjct: 192 ALAAKFAEKSPQTLASLLELLYSNKVYSYEGSLKLEAKRFGEAFESEDAKEGIQAFLEKR 251
>sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD
PE=1 SV=3
Length = 261
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 26 FIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMT 85
D KP+IA +NG A G D++ SD A +F P G+
Sbjct: 90 LFDLNKPVIAAINGYAFGGGFELALAADMIICSDNA------------SFALPEAQLGIV 137
Query: 86 PEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEI 133
P+ + P+ ++ +E+L TGR++NAQEAL++G + V + E+
Sbjct: 138 PDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATEL 185
>sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320)
GN=caiD PE=3 SV=1
Length = 261
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 26 FIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMT 85
D KP+IA +NG A G D++ SD A +F P G+
Sbjct: 90 LFDLNKPVIAAINGYAFGGGFELALAADMIICSDNA------------SFALPEAQLGIV 137
Query: 86 PEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEI 133
P+ + P+ ++ +E+L TGR++NAQEAL++G + V + E+
Sbjct: 138 PDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATEL 185
>sp|Q9LCU3|CBAD2_ARTSP 4-chlorobenzoyl coenzyme A dehalogenase-2 OS=Arthrobacter sp.
GN=fcbB2 PE=1 SV=1
Length = 276
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 31 KPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCS 90
KP +A +NGPA+G CD+ +D +ATF + G+ + S
Sbjct: 104 KPTLAAINGPAVGGGLGMSLACDLAVCTD------------RATFLPAWMSIGIANDASS 151
Query: 91 SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAK 146
S PRI G A E L T R L A EA ++G V+ VF+ E D R+ A+
Sbjct: 152 SFYLPRIVGYRRAMEWLLTNRTLGADEAYEWGVVNRVFS----EADFQSRVGEIAR 203
>sp|O85078|CBAD1_ARTSP 4-chlorobenzoyl coenzyme A dehalogenase-1 OS=Arthrobacter sp.
GN=fcbB1 PE=1 SV=2
Length = 276
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 31 KPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCS 90
KP +A +NGPA+G CD+ +D +ATF + G+ + S
Sbjct: 104 KPTLAAINGPAVGGGLGMSLACDLAVCTD------------RATFLPAWMSIGIANDASS 151
Query: 91 SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAK 146
S PRI G A E L T R L A EA ++G V+ VF+ E D R+ A+
Sbjct: 152 SFYLPRIVGYRRAMEWLLTNRTLGADEAYEWGVVNRVFS----EADFQSRVGEIAR 203
>sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021)
GN=fadB1 PE=3 SV=2
Length = 257
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 31 KPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCS 90
KP+IA V+G A+G +CD + AS+T A F P G+ P
Sbjct: 95 KPMIAAVSGFALGGGCELAMMCDFIIASET------------AKFGQPEITLGVIPGMGG 142
Query: 91 SVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPPQ 150
S R G + A +L+ TGR ++A EA + G VS V + + + A
Sbjct: 143 SQRLTRAVGKAKAMDLILTGRMMDAAEAERSGLVSRVVAPDRLLEEALGAAEKIASFSLP 202
Query: 151 SMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
+ + AK+ V + L E + E + + + +E+ + AF ++
Sbjct: 203 AAMMAKEAVNRSLELTLAEGLRFERRLFQSLFATEDQKEGMAAFVAKR 250
>sp|O07137|ECHA8_MYCLE Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae (strain
TN) GN=echA8 PE=3 SV=1
Length = 257
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 20/171 (11%)
Query: 32 PLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCSS 91
P+IA V G A+G +CD++ A+DT A F P G+ P S
Sbjct: 96 PMIAAVAGYALGGGCELAMMCDLLIAADT------------AKFGQPEIKLGVLPGMGGS 143
Query: 92 VLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWA----KL 147
R G + A +L+ TGR ++A EA + G VS V + DL P A A ++
Sbjct: 144 QRLTRAIGKAKAMDLILTGRTIDAAEAERSGLVSRVVLAD----DLLPEAKAVATTISQM 199
Query: 148 PPQSMIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
+ AK+ V S L E E + + +++ + AF ++
Sbjct: 200 SRSATRMAKEAVNRSFESTLAEGLLHERRLFHSTFVTDDQSEGMAAFIEKR 250
>sp|Q62651|ECH1_RAT Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
OS=Rattus norvegicus GN=Ech1 PE=1 SV=2
Length = 327
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 20 QKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPF 79
QK PKP+IA ++G IG ++ CDI + + A V V
Sbjct: 149 QKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDV--------- 199
Query: 80 TLRGMTPEGCSSVLFPRIFGN-SVASELLYTGRKLNAQEALQYGFVSGVFTTEEI 133
G+ + + P++ GN S+ +EL +T RK+ A EAL G VS VF +++
Sbjct: 200 ---GLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDV 251
>sp|Q5RFG0|ECH1_PONAB Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo
abelii GN=ECH1 PE=2 SV=1
Length = 328
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA V+G IG + CDI + + A V V G+ +
Sbjct: 160 PKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDV------------GLAADVG 207
Query: 90 SSVLFPRIFGN-SVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERD 136
+ P++ GN S+ +EL +T RK+ A EAL G VS VF +E+ D
Sbjct: 208 TLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLD 255
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 19 LQKYVAAFIDYPKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTP 78
L+ ++ +P P IA ++G A+G CD+ A+ +A++
Sbjct: 118 LRGLMSEIAAFPVPTIAAMDGFALGGGLELALACDLRIAASSAVM------------GLI 165
Query: 79 FTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLW 138
T RG+ P + PR G ++A EL++TGR+LN +A + G V+ E +
Sbjct: 166 ETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGAQARELGLVNHAVAQNEEGNAAY 225
Query: 139 PRIHAWAK-LPPQSMIFAK 156
R A A+ + PQ+ I +
Sbjct: 226 HRALALAQEILPQAPIAVR 244
>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis
GN=echA8 PE=1 SV=1
Length = 257
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 32 PLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCSS 91
P IA V G A+G +CD++ A+DT A F P G+ P S
Sbjct: 96 PTIAAVAGYALGGGCELAMMCDVLIAADT------------AKFGQPEIKLGVLPGMGGS 143
Query: 92 VLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPPQS 151
R G + A +L+ TGR ++A EA + G VS V +++ + +++ +
Sbjct: 144 QRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASA 203
Query: 152 MIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
AK+ V S L E E + + +E+ + AF ++
Sbjct: 204 ARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKR 250
>sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1
Length = 257
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 32 PLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGCSS 91
P IA V G A+G +CD++ A+DT A F P G+ P S
Sbjct: 96 PTIAAVAGYALGGGCELAMMCDVLIAADT------------AKFGQPEIKLGVLPGMGGS 143
Query: 92 VLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLPPQS 151
R G + A +L+ TGR ++A EA + G VS V +++ + +++ +
Sbjct: 144 QRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASA 203
Query: 152 MIFAKQLVRVPMLSMLHEANKRECKRLEERWESEEFMNAITAFFNRK 198
AK+ V S L E E + + +E+ + AF ++
Sbjct: 204 ARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKR 250
>sp|Q13011|ECH1_HUMAN Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo
sapiens GN=ECH1 PE=1 SV=2
Length = 328
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 30 PKPLIAIVNGPAIGISATTLALCDIVFASDTAILLNHPVFVLQATFHTPFTLRGMTPEGC 89
PKP+IA V+G IG + CDI + + A V V G+ +
Sbjct: 160 PKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDV------------GLAADVG 207
Query: 90 SSVLFPRIFGN-SVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERD 136
+ P++ GN S+ +EL +T RK+ A EAL G VS VF +E+ D
Sbjct: 208 TLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLD 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,740,550
Number of Sequences: 539616
Number of extensions: 2548776
Number of successful extensions: 6937
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 6580
Number of HSP's gapped (non-prelim): 329
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)