BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5407
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DIY8|M17L2_XENTR Mpv17-like protein 2 OS=Xenopus tropicalis GN=mpv17l2 PE=2 SV=1
Length = 222
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 10 VGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGR 69
+GD ++Q + + ER + + +RT M G S+G L H Y LD+ +PGR
Sbjct: 39 IGDSIQQSREVRRDPERKR--------DWLRTGRMFAIGCSMGPLMHFWYSWLDRSFPGR 90
Query: 70 ALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPP 129
++ V +KVL DQ+ SPVL +F+ +G ME + E +K Y A+W VWP
Sbjct: 91 GITVVMRKVLIDQLVASPVLGLWYFLGMGSMEGQKLEKSWQEFREKFWEFYKADWTVWPA 150
Query: 130 AQVINFYFLSTKYRVLYV 147
AQ+INFYFLS KYRV+Y+
Sbjct: 151 AQMINFYFLSPKYRVIYI 168
>sp|Q6DGV7|M17L2_DANRE Mpv17-like protein 2 OS=Danio rerio GN=mpv17l2 PE=2 SV=1
Length = 199
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 8/139 (5%)
Query: 9 VVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPG 68
GD+++Q E ++P + W+ RT M G S+G H+ Y+ LDK + G
Sbjct: 39 AAGDLIQQ------TREIRRTPGRTRDWS--RTGCMFAVGCSMGPFMHYWYQWLDKYFIG 90
Query: 69 RALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWP 128
++ V KKVL DQ+ SP L + +F+ +G+ME + ++ E DK Y A+W VWP
Sbjct: 91 NGINNVCKKVLVDQLVASPTLGAWYFLGMGMMEGHTFIEAQQEFRDKFWEFYKADWCVWP 150
Query: 129 PAQVINFYFLSTKYRVLYV 147
AQ+INFYFL K+RVLYV
Sbjct: 151 AAQMINFYFLPPKFRVLYV 169
>sp|A5D787|M17L2_BOVIN Mpv17-like protein 2 OS=Bos taurus GN=MPV17L2 PE=2 SV=1
Length = 218
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 40 RTFHMSLSGASVGILCHHGYRLLDKLYPGRA---LSTVFKKVLFDQIFISPVLISVFFVT 96
R+ M G S+G H+ Y LD+L+P L V KKVL DQ+ SP+L +F+
Sbjct: 61 RSVSMFAVGCSMGPFLHYWYLWLDRLFPASGFPGLPNVLKKVLIDQLVASPMLGVWYFLG 120
Query: 97 LGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
LG +E + E+ DK Y A+W VWP AQ++NF F+ ++RV Y+
Sbjct: 121 LGCLEGQTLDKSCQELRDKFWEFYKADWCVWPAAQLVNFLFVPPQFRVTYI 171
>sp|Q567V2|M17L2_HUMAN Mpv17-like protein 2 OS=Homo sapiens GN=MPV17L2 PE=1 SV=2
Length = 206
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 40 RTFHMSLSGASVGILCHHGYRLLDKLYPG---RALSTVFKKVLFDQIFISPVLISVFFVT 96
R+ M G S+G H+ Y LD+L+P R V KKVL DQ+ SP+L +F+
Sbjct: 61 RSASMFAVGCSMGPFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLG 120
Query: 97 LGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
LG +E + + E+ +K Y A+W VWP AQ +NF F+ ++RV Y+
Sbjct: 121 LGCLEGQTVGESCQELREKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYI 171
>sp|Q8VIK2|M17L2_MOUSE Mpv17-like protein 2 OS=Mus musculus GN=Mpv17l2 PE=1 SV=1
Length = 200
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 37 NAIRTFHMSLSGASVGILCHHGYRLLDKLYPG---RALSTVFKKVLFDQIFISPVLISVF 93
+A R+ M G S+G H Y LD+L P R+L +V KKVL DQ SP+L +
Sbjct: 58 SARRSASMFAVGCSMGPFLHFWYLWLDRLLPASGLRSLPSVMKKVLVDQTVASPILGVWY 117
Query: 94 FVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
F+ LG +E + + E+ K Y A+W VWP AQ++NF F+ + +RV Y+
Sbjct: 118 FLGLGSLEGQTLEESCQELRAKFWDFYKADWCVWPAAQLVNFLFIPSHFRVTYI 171
>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum
GN=DDB_G0290631 PE=3 SV=1
Length = 185
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Query: 29 SPTQEPSWNAIRTFHMSLSGASV-GILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISP 87
S ++ ++ R+ M++ G +V G L H+ ++ LDK +P ++ F K+ DQ+ SP
Sbjct: 48 SRDKDKKYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSP 107
Query: 88 VLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
V +FF +GI+E S DI ++ Y+++ VVWP +NF ++S+ +RV ++
Sbjct: 108 VFNFLFFSGMGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFM 167
>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum
GN=DDB_G0278529 PE=3 SV=1
Length = 193
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 10 VGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGR 69
GDIL Q ++ E+ + + T + SG + H+ YR LD + G
Sbjct: 30 TGDILAQRLEHKFKDEKSQFKLDYKRVATMSTVGIFYSGP----MLHYWYRSLDIMVKGE 85
Query: 70 ALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMA---EWVV 126
S + KK+L DQ+ +PV I F + N + + + + L+ A W++
Sbjct: 86 GRSVIIKKMLIDQLLFAPVAIGGFMTVTNFINNKGEL---KNLENFTKELFYAVKINWLI 142
Query: 127 WPPAQVINFYFLSTKYRVLY 146
WP AQ+INF + RVLY
Sbjct: 143 WPAAQIINFSLVPPNLRVLY 162
>sp|Q754F0|SYM1_ASHGO Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1
Length = 182
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 8 FVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASV-GILCHHGYRLLDKLY 66
F +GDI+ Q + P S++ +RT L GA + ++ YR L +
Sbjct: 28 FGLGDIVAQ----------TQFPEPGASYDPMRTLRPFLYGAVLFSLVGDKWYRFLSTVR 77
Query: 67 PGRA----LSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMA 122
GR + V +V DQ+ +P+ + +++ + +ME S D+ + +K +A
Sbjct: 78 LGRLPQAHWANVLARVACDQLIFAPIGVPLYYTAMALMEGGSLEDVRIRLSEKWWSTLLA 137
Query: 123 EWVVWPPAQVINFYFLSTKYRVLYV 147
W+VWP Q+ NF + ++R+L V
Sbjct: 138 NWIVWPAFQLCNFSLVPVQHRLLTV 162
>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1
Length = 176
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 37 NAIRTFHM-SLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFV 95
A RT M SL VG + YR+LD+L PG KK+L DQ +P + F
Sbjct: 47 QAGRTLTMASLGCGFVGPVVGGWYRVLDRLIPGTTKVDALKKMLLDQGGFAPCFLGCFLP 106
Query: 96 TLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
+G + S+ D + ++ + + +WP Q+ NFY + YR+ V
Sbjct: 107 LVGTLNGLSAQDNWAKLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVV 158
>sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1
Length = 196
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 28/145 (19%)
Query: 10 VGDILEQYYQNHINTERPKSPTQEPSWNAIR-------TFHMSLSGASVGILCHHGYRLL 62
GD L+Q Q +E +W R TFH + + + RLL
Sbjct: 30 AGDALQQRLQG-----------REANWRQTRRVATLVVTFHANFN--------YVWLRLL 70
Query: 63 DKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMA 122
++ PGRA + K+L DQ+ +P+ +S F+V + I++ DI+ ++ K Y++
Sbjct: 71 ERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKD--DIFLDLKQKFWNTYLS 128
Query: 123 EWVVWPPAQVINFYFLSTKYRVLYV 147
+ WP Q+ NF + ++R Y
Sbjct: 129 GLMYWPFVQLTNFSLVPVQWRTAYA 153
>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 40 RTFHM-SLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLG 98
RT M SL VG + YR+LD L PG KK+L DQ +P + F +G
Sbjct: 50 RTLTMASLGCGFVGPVVGGWYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVG 109
Query: 99 IMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
++ S+ D + ++ + + +WP Q+ NFY + YR+ V
Sbjct: 110 VLNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVV 158
>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 37 NAIRTFHM-SLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFV 95
A RT M SL VG + Y++LD L PG KK+L DQ +P + F
Sbjct: 47 QAGRTLTMVSLGCGFVGPVVGGWYKVLDHLIPGTTKVHALKKMLLDQGGFAPCFLGCFLP 106
Query: 96 TLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
+GI+ S+ D + ++ + + +WP Q+ NFY + YR+ V
Sbjct: 107 LVGILNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVV 158
>sp|Q2KIK2|MP17L_BOVIN Mpv17-like protein OS=Bos taurus GN=MPV17L PE=2 SV=1
Length = 196
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 61 LLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLY 120
LL++ PGRA T+ KVL DQ PV +S F+ + I++ DI+ ++ K Y
Sbjct: 69 LLERALPGRAPRTILAKVLCDQALGGPVYVSTFYAGMSILQGKD--DIFLDMRQKFWNTY 126
Query: 121 MAEWVVWPPAQVINFYFLSTKYRVLYV 147
+ + WP Q+INF + ++R Y
Sbjct: 127 KSGLMYWPFVQLINFSLIPIRWRTAYT 153
>sp|Q99MS3|MP17L_MOUSE Mpv17-like protein OS=Mus musculus GN=Mpv17l PE=1 SV=2
Length = 194
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 60 RLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRL 119
RLL++ PGRA TV KVL DQ P+ +S F+V + +++ DI+ ++ K
Sbjct: 68 RLLERALPGRAPRTVLAKVLCDQTVGGPIALSAFYVGMSVLQGKD--DIFLDLKQKFWNT 125
Query: 120 YMAEWVVWPPAQVINFYFLSTKYRVLYV 147
Y + + WP Q+ NF + +R Y
Sbjct: 126 YKSGLMYWPFVQLTNFSLVPVHWRTAYT 153
>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2
Length = 177
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%)
Query: 44 MSLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENS 103
M + VG + Y++LD++ PG KK+L DQ+ +P + F +
Sbjct: 56 MGIGFCFVGPVVGGWYKILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFLSIASALNGL 115
Query: 104 SSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
S I+ ++ + + + +WP QV NFYF+ +R+ V
Sbjct: 116 SGEQIWGKLKRDYKDALITNYYIWPAVQVANFYFIPLYHRLAVV 159
>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1
Length = 177
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 37 NAIRTFHM-SLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFV 95
NA RT M S+ VG + Y++LDKL G S KK+L DQ+ +P + F
Sbjct: 48 NARRTAKMMSIGFFFVGPVVGGWYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLG 107
Query: 96 TLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
G + + + ++ ++ + +WPP Q+ NFYF+ +R+ V
Sbjct: 108 ITGTLNGLTVEENVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVV 159
>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1
Length = 176
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 40 RTFHM-SLSGASVGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLG 98
RT M SL VG + Y++LD+ PG KK+L DQ +P + F +G
Sbjct: 50 RTLTMVSLGCGFVGPVVGGWYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVG 109
Query: 99 IMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
+ S+ D + ++ + + +WP Q+ NFY + YR+ V
Sbjct: 110 ALNGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVV 158
>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2
Length = 172
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 40 RTFHMSLSGASV-GILCHHGYRLLDK--LYPGRALSTVFKKVLFDQIFISPVLISVFFVT 96
RT M L G +V G +R L K + PG T+ +V DQ +P I +F +
Sbjct: 48 RTGRMVLYGGAVFGPAATTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIFLGS 107
Query: 97 LGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
+ ++E + D+ ++ W+VWP Q++NF + +RVL+V
Sbjct: 108 MAVLEGT---DVKEKLQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFV 155
>sp|Q60SZ2|MPV17_CAEBR Mpv17-like protein (Fragment) OS=Caenorhabditis briggsae
GN=CBG20693 PE=3 SV=2
Length = 181
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 21/143 (14%)
Query: 10 VGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMS-LSGASVGILCHHGYRLLDKLYPG 68
GD QY T + SW+ RT + L+ + + +R+L+++
Sbjct: 29 AGDAFTQYL------------TGQKSWDYKRTARFTCLAAVFIAPPLNVWFRVLERVRHS 76
Query: 69 RALSTVFKKVLFDQIFISPVLISVFFVTLGIMEN---SSSMD-IYNEIYDKGRRLYMAEW 124
+ VF ++ DQ SP ++ V L ++E S S+D + N+ YD +Y +
Sbjct: 77 NRHAQVFSRMSIDQFMFSPFFNAIILVNLRLLEGFSFSKSVDKMKNDWYD----VYTSSL 132
Query: 125 VVWPPAQVINFYFLSTKYRVLYV 147
+WP Q+INFYF+ YRV+ +
Sbjct: 133 RLWPAVQLINFYFVPLNYRVILI 155
>sp|Q4IPX8|SYM1_GIBZE Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=SYM1 PE=3 SV=1
Length = 175
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 8 FVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASV-GILCHHGYRLLDKLY 66
F GD+ Q ++ + +RT M+L G V G + + L +
Sbjct: 28 FATGDVTAQQLVEKRGAQKH---------DLVRTGRMALYGGFVFGPVATTWFAFLARRV 78
Query: 67 PGR--ALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEW 124
R + V +V DQ+ +PV+I VF ++ ME S + ++ + + A W
Sbjct: 79 NVRNNKKAEVLARVACDQLGFAPVMIGVFLSSMATMEGKSVKERIDKTWWPALK---ANW 135
Query: 125 VVWPPAQVINFYFLSTKYRVLYV 147
+VWP QVINF + +YR+ +
Sbjct: 136 MVWPAVQVINFSLIPLQYRLFFA 158
>sp|Q6CIY7|SYM1_KLULA Protein SYM1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SYM1 PE=3
SV=1
Length = 195
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 8 FVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASV-GILCHHGYRLLDK-- 64
F +GD++ Q P+ Q+ ++ RT + G+ + I+ Y+ L++
Sbjct: 28 FGIGDVIAQ-------VGFPEKKGQK--YDLARTVRAVVYGSLIFSIIGDSWYKFLNQKV 78
Query: 65 -LYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAE 123
+ PG+ + +V DQ+ +PV I +++ + I+E S +D +I D +
Sbjct: 79 IVKPGKHWTNTAARVGCDQLLFAPVGIPMYYGVMSILEGKSLVDAKKKIEDNWWPTLVTN 138
Query: 124 WVVWPPAQVINFYFLSTKYRVLYV 147
W VWP Q+INF + +R+ V
Sbjct: 139 WYVWPAFQLINFSLVPVHHRLFSV 162
>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum
GN=DDB_G0290223 PE=3 SV=1
Length = 184
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 32 QEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPG-RALSTVFKKVLFDQIFISPVLI 90
++ +WNA+ F ++ G L H+ + +LD+L+ + + K++ DQ+ +P +
Sbjct: 51 KKINWNAVVKF--TVWGLISSPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFIN 108
Query: 91 SVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLY 146
F+ L I++ ++ +D L A W VWP AQ+INF F+ + RVL+
Sbjct: 109 IAFYSVLAILDGKPKSILFKLYFDLFPTL-KASWKVWPLAQLINFRFVPSHLRVLF 163
>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3
Length = 196
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%)
Query: 51 VGILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYN 110
G L H Y L+++ P K++L D++ +P +S+FF+ + +E +
Sbjct: 84 TGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNFLEGQDTAAFAA 143
Query: 111 EIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
++ W VW P Q IN ++ ++RVL+
Sbjct: 144 KMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFA 180
>sp|Q68F62|MP17L_XENLA Mpv17-like protein OS=Xenopus laevis GN=mpv17l PE=2 SV=1
Length = 203
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Query: 8 FVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGY-----RLL 62
F DI++Q + KSPT EP F + VG H + R +
Sbjct: 24 FASADIVQQ--------KLSKSPT-EPI-----DFKQTAKVGLVGFCFHANFNFFWLRFI 69
Query: 63 DKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMA 122
++ +PG A V +KV DQ+ +P+ IS F+ L +++ D++ + +K Y
Sbjct: 70 ERTFPGSAPLNVIRKVACDQLMAAPITISAFYTGLSLLDGER--DVFKNLKEKFWPTYKT 127
Query: 123 EWVVWPPAQVINFYFLSTKYRVLYV 147
+ W Q INF + R Y+
Sbjct: 128 GVMCWTVFQTINFSVIPPFVRTAYI 152
>sp|Q6CAW5|SYM1_YARLI Protein SYM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SYM1 PE=3 SV=1
Length = 202
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 17/138 (12%)
Query: 8 FVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYP 67
F++GD + Q Y +++P P +RT + + +R L
Sbjct: 24 FMIGDCVSQRY----FSDKPYEP--------MRTARAGIYACAFAPAMTAWFRFL----- 66
Query: 68 GRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVW 127
G+ V KV DQ +P I +F +G++E S I+ + ++ W++W
Sbjct: 67 GQQQLPVIAKVAIDQAVFAPSSIGYYFSVMGLLEGKSPDTIWQSLKNQYWDTLKCGWMIW 126
Query: 128 PPAQVINFYFLSTKYRVL 145
P Q+ NF + +RVL
Sbjct: 127 PAFQLFNFGIVPPNFRVL 144
>sp|Q4P9K6|SYM1_USTMA Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SYM1
PE=3 SV=1
Length = 199
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 40 RTFHMSLSGASV-GILCHHGY-RLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTL 97
RTF +SL G V L + R+L+++ + + KV DQ SP +++FF
Sbjct: 48 RTFRLSLYGGCVFSPLASIWFGRVLERVRFSSKAANIATKVALDQAIASPAFVALFFGAT 107
Query: 98 GIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
IME S N+I W +W P Q +N + R+L+V
Sbjct: 108 TIMEGGSPDQAKNKIIHNWWPTLKTAWGLWIPVQTLNMALVPPSQRLLFV 157
>sp|Q4WDZ0|SYM1_ASPFU Protein sym1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=sym1 PE=3 SV=1
Length = 196
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 70 ALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPP 129
A TV +V DQ+ +P +I VF ++ ++E S + Y + A W VWP
Sbjct: 96 AQRTVVGRVAADQLLFAPTMIGVFLSSMSVLEGGSLSEKLERSYWPALK---ANWTVWPF 152
Query: 130 AQVINFYFLSTKYRVLYV 147
Q++NF + ++RVL V
Sbjct: 153 LQLVNFALVPLQFRVLTV 170
>sp|Q7YWV6|MPV17_CAEEL Mpv17-like protein OS=Caenorhabditis elegans GN=T18D3.9 PE=3 SV=1
Length = 181
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 11 GDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMS-LSGASVGILCHHGYRLLDKLYPGR 69
GD L QY S QE W+ RT S LS + +RLL+K+
Sbjct: 30 GDCLAQYL----------SHNQE--WDRWRTARFSFLSSCFMAPSLFIWFRLLEKVKGNN 77
Query: 70 ALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPP 129
+ KK+ DQ+ SP + L ++++ S+ ++ + + +Y VWP
Sbjct: 78 KSLLLVKKLCIDQLCFSPCFNAAILFNLRLLQHQSAEKSWDLLKEDWFNIYATSLKVWPF 137
Query: 130 AQVINFYFLSTKYRVL 145
QV+N F+ YRV+
Sbjct: 138 VQVVNLCFVPLNYRVI 153
>sp|Q2TXA2|SYM1_ASPOR Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=sym1 PE=3 SV=1
Length = 173
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 14/142 (9%)
Query: 8 FVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASV-GILCHHGYRLLDK-L 65
F GD+L Q + E+ + RT M+L G ++ G + L + +
Sbjct: 25 FGSGDVLAQQVVDRKGLEKH---------DFARTGRMALYGGAIFGPAATTWFGFLQRNV 75
Query: 66 YPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWV 125
+ +T+ +V DQ +P ++ F ++ IME S ++ + + Y A
Sbjct: 76 VLKNSKATIVARVAADQCLFTPTHLTCFLTSMAIMEGSDPIEKWRNSFLPS---YKANLT 132
Query: 126 VWPPAQVINFYFLSTKYRVLYV 147
+WP Q +NF + +YRVL V
Sbjct: 133 IWPLVQGVNFSIVPLEYRVLVV 154
>sp|P42925|PXMP2_MOUSE Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=2 SV=2
Length = 194
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%)
Query: 52 GILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNE 111
G L H+ Y ++ P K++L D++F +P + +FF + ++E + +
Sbjct: 83 GPLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNVSVFVAK 142
Query: 112 IYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
+ W +W P Q IN ++ ++RVL+
Sbjct: 143 MRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFA 178
>sp|Q9V492|MPV17_DROME Mpv17-like protein OS=Drosophila melanogaster GN=CG11077 PE=2 SV=1
Length = 168
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 9 VVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSG-ASVGILCHHGYRLLDKLYP 67
+GD + Q++ + + + W+A RT + G VG Y L+ P
Sbjct: 19 CLGDTISQFFFDKKSLD---------EWDAGRTLRFGIVGLVFVGPTLRRWYHFLESRVP 69
Query: 68 G--RALSTVFKKVLFDQ-IFISPVLISVFFVTLGIMENSSSMD-IYNEIYDKGRRLYMAE 123
+ K+L DQ +F P +++ F+ + N +D I I D + +
Sbjct: 70 KTYSPMRRGVTKMLVDQTLFAPPFTMAMSFLV--PLSNGEPIDRIRQRILDSYLSILVRN 127
Query: 124 WVVWPPAQVINFYFLSTKYRVLYV 147
+++WP AQ++NF F+ Y+VLY
Sbjct: 128 YMLWPAAQMLNFRFVPLGYQVLYA 151
>sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1
SV=2
Length = 194
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%)
Query: 52 GILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNE 111
G L H+ Y ++ P K++L D++F +P + +FF + ++E + +
Sbjct: 83 GPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNISVFVAK 142
Query: 112 IYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
+ W +W P Q IN ++ ++RVL+
Sbjct: 143 MRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFA 178
>sp|Q54ZX5|PX24A_DICDI PXMP2/4 family protein 1 OS=Dictyostelium discoideum
GN=DDB_G0277335 PE=3 SV=1
Length = 202
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 19/143 (13%)
Query: 8 FVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGI-LCHHGYRLLDKLY 66
F +GD L Q +N ++ RT M G + + H ++ LDK +
Sbjct: 33 FFLGDTLAQKIENR-------------GYDPKRTLMMCTVGTFIVVPQIHFWFKFLDKTF 79
Query: 67 PGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYM----A 122
+ KV+ DQ+ P L ++ + + D + + DK ++ +
Sbjct: 80 TKPGWAGAIPKVVVDQLTFGPYLFVCNMTSVQLFHQGFNFDTH-QWKDKMKKDFFPVLQK 138
Query: 123 EWVVWPPAQVINFYFLSTKYRVL 145
W++WP I F F+ YR+L
Sbjct: 139 AWMIWPLTNCILFRFVHPDYRIL 161
>sp|Q59Q43|SYM1_CANAL Protein SYM1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SYM1 PE=3 SV=1
Length = 195
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 69 RALSTVFKKVLFDQIFISPVL-ISVFFVTLGIMENSSSMDIYNEIYDKGRRLYM----AE 123
R++ST+ + V+ DQ+ +P + I +++ ++ I+EN + I DK + +
Sbjct: 96 RSMSTLLR-VMVDQLVFAPFIGIPLYYSSMTILENRQPF--LDNIIDKFNTSWWITLKSN 152
Query: 124 WVVWPPAQVINFYFLSTKYRVLYV 147
W+VWP Q NFY L ++R+L V
Sbjct: 153 WLVWPLFQFFNFYLLPVQFRLLAV 176
>sp|Q6FXJ3|SYM1_CANGA Protein SYM1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=SYM1 PE=3 SV=1
Length = 210
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 8 FVVGDILEQY-YQNHINTERPKSPTQE---PSWNAIRTFHMSLSGASV-GILCHHGYRLL 62
F +GD+ Q + + +T P + T + ++ RT + G+ + + YR L
Sbjct: 28 FGIGDVSAQLLFPSGPDTLPPSAQTNDVKRGKYDIPRTVRAVVYGSMIFSFIGDRWYRFL 87
Query: 63 DKLY----PGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRR 118
K+ P + S + +V DQ+ +P+ + +F + ++E +I +
Sbjct: 88 TKVKFSNKPAKHWSNMVLRVCVDQLGFAPLGLPFYFGCMSLLEGHGLGAAREKIKLQWWD 147
Query: 119 LYMAEWVVWPPAQVINFYFLSTKYRVL 145
W VWP Q++NF + ++R+L
Sbjct: 148 TLKTNWCVWPLFQMVNFSLVPLQHRLL 174
>sp|Q06563|SYM1_YEAST Protein SYM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SYM1 PE=1 SV=1
Length = 197
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 59 YRLLD-KLY----PGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIY 113
Y++L+ K+Y P S + +V DQ+ +P+ + +F + IME S +I
Sbjct: 71 YKILNNKIYMRNRPQYHWSNMVLRVAVDQLAFAPLGLPFYFTCMSIMEGRSFDVAKLKIK 130
Query: 114 DKGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
++ + W VWP Q INF + ++R+L V
Sbjct: 131 EQWWPTLLTNWAVWPLFQAINFSVVPLQHRLLAV 164
>sp|O14142|SYM1_SCHPO Protein sym1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sym1 PE=3 SV=1
Length = 206
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 60 RLLDKLYP-GRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRR 118
RLL +P + V K+VL DQ +P + FF + + E Y+++
Sbjct: 88 RLLSAKFPIEKGAINVVKRVLLDQAVFAPFGTAFFFSWMTLAEGKGFRGAYDKLQAVFWP 147
Query: 119 LYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
A ++VWP Q +NF+ + +Y++ +
Sbjct: 148 TLKANYMVWPFFQTVNFWLMPLQYQMPFA 176
>sp|P0CQ38|SYM1_CRYNJ Protein SYM1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=SYM1 PE=3 SV=1
Length = 190
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 59 YRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRR 118
+R L+++ F +V DQ +PV++S FF + ME + ++
Sbjct: 70 FRTLERIPIRSRWPATFARVGLDQFGFAPVILSGFFTAMTFMEGKDFNAAKVKWHESFFP 129
Query: 119 LYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
A W+++ P Q++N + +YR+L V
Sbjct: 130 TLQANWMLFIPFQILNMGLVPLQYRLLAV 158
>sp|P0CQ39|SYM1_CRYNB Protein SYM1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=SYM1 PE=3 SV=1
Length = 190
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 59 YRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRR 118
+R L+++ F +V DQ +PV++S FF + ME + ++
Sbjct: 70 FRTLERIPIRSRWPATFARVGLDQFGFAPVILSGFFTAMTFMEGKDFNAAKVKWHESFFP 129
Query: 119 LYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
A W+++ P Q++N + +YR+L V
Sbjct: 130 TLQANWMLFIPFQILNMGLVPLQYRLLAV 158
>sp|Q6BMY0|SYM1_DEBHA Protein SYM1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=SYM1 PE=3 SV=1
Length = 206
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 8 FVVGDILEQYYQNHINTERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKL-- 65
F GD L Q T P S + TF+ S+ A +G YRLL K+
Sbjct: 28 FGSGDYLAQ-------TLYPSSSKYDYKRTLRATFYGSIIFAPIG---DKWYRLLHKINF 77
Query: 66 -YPGRALSTVFKKVL-------FDQIFISPVL-ISVFFVTLGIME-NSSSMDIYNE-IYD 114
+P +S KVL DQ+ +P + I +++ + ++E + + + + E ++
Sbjct: 78 PFPKTKVSPTVSKVLNTLTKVGVDQLVFAPFIGIPLYYSVMSVLEFHDNPLQVAREKLHA 137
Query: 115 KGRRLYMAEWVVWPPAQVINFYFLSTKYRVLYV 147
WVVWP Q+ NF + ++R+L V
Sbjct: 138 HWFNTLKTNWVVWPTFQLFNFALIPVQFRLLVV 170
>sp|Q08743|YO292_YEAST Vacuolar membrane protein YOR292C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOR292C PE=1 SV=1
Length = 309
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 25 ERPKSPTQEPSWNAIRTFHMSLSGASVGILCHHGYRLLDKLYPGR-ALSTVFKKVLFDQI 83
+RP + + +++ R G + Y+ L+ Y + VF++VL DQ+
Sbjct: 167 DRPLATFKTDTFDFFRWGCFMFWGFFISFFQAPWYKFLNFFYTEDPTVVQVFERVLSDQL 226
Query: 84 FISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMA----EWVVWPPAQVINFYFLS 139
SP+ + FF+ + D + K +RLY++ ++VWP Q INF +
Sbjct: 227 LYSPISLYCFFMFSNYVMEGGDKDTLGK---KIQRLYISTLGCNYLVWPMVQFINFLIMP 283
Query: 140 TKYRV 144
++
Sbjct: 284 RDFQA 288
>sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22
PE=1 SV=1
Length = 190
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 47 SGASVGILCHHGYRLLDKLYPGRA-LSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSS 105
+G +G H + LDK + G+ TV KKV+ +Q+ +SP+ +F + G++ +
Sbjct: 62 AGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTP 121
Query: 106 MDIYNEIYDKG-RRLYMAEWVVWPPAQVINFYFLSTKYRVL 145
+ E K + + W +P IN+ ++ +RV+
Sbjct: 122 WTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVI 162
>sp|Q10244|YD1E_SCHPO Uncharacterized protein C4G9.14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4G9.14 PE=3 SV=1
Length = 221
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 77 KVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLY----MAEWVVWPPAQV 132
+V DQ +P+ I FF+ +GI E S Y + R+ Y A +++WP Q+
Sbjct: 129 RVALDQFIFAPLGIVFFFLFMGITECKS----YERLKSYFRKHYWPTLKANYILWPAVQL 184
Query: 133 INFYFLSTKYRVLY 146
NF F+ +V++
Sbjct: 185 FNFTFVPLVLQVIF 198
>sp|A5D9Y9|NPR3_PICGU Nitrogen permease regulator 3 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=NPR3 PE=3 SV=2
Length = 787
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 65 LYPGRALSTVFK---KVLFDQIFISPVLISVFFVTLGIMENSSSMDI 108
L PGRA S K K++FD+ ++P ++SVF+ L M +S+++
Sbjct: 712 LDPGRASSLERKWINKIIFDECKLTPAMVSVFYKFLKYMNGKNSLEL 758
>sp|Q9NR77|PXMP2_HUMAN Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3
Length = 195
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 85 ISPVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYFLSTKYRV 144
+P + +FF+ + +E + ++ W VW P Q IN ++ K+RV
Sbjct: 117 FAPAFLMLFFLIMNFLEGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRV 176
Query: 145 LYV 147
L+
Sbjct: 177 LFA 179
>sp|Q28905|PF2R_SHEEP Prostaglandin F2-alpha receptor OS=Ovis aries GN=PTGFR PE=2 SV=1
Length = 362
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 91 SVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYF 137
S+ F+T+GI+ NS ++ I + Y + R+ Y + +++ A VI +F
Sbjct: 33 SIIFMTVGILSNSLAIAILMKAYQRFRQKYKSSFLLLASALVITDFF 79
>sp|P37289|PF2R_BOVIN Prostaglandin F2-alpha receptor OS=Bos taurus GN=PTGFR PE=2 SV=1
Length = 362
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 91 SVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYF 137
S+ F+T+GI+ NS ++ I + Y + R+ Y + +++ A VI +F
Sbjct: 33 SIIFMTVGILSNSLAIAILMKAYQRFRQKYKSSFLLLASALVITDFF 79
>sp|Q03660|TR130_YEAST Trafficking protein particle complex II-specific subunit 130
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TRS130 PE=1 SV=1
Length = 1102
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 52 GILCHHGYRLLDKLYPGRALSTVFKKVLFDQIFISPVLISVFFVTLGIMENSSSMDIYNE 111
G++ GYRL+DK YP + F L + F+ + F+TL + ++N+
Sbjct: 366 GVMATSGYRLMDKNYPNSDVKYKFD--LLKETFVDETVFQENFLTL----TKEILSLFNK 419
Query: 112 IYDKGRRL 119
K +R+
Sbjct: 420 CEGKRQRI 427
>sp|P43118|PF2R_RAT Prostaglandin F2-alpha receptor OS=Rattus norvegicus GN=Ptgfr PE=2
SV=1
Length = 366
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 88 VLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYF 137
V S+ F+T+GI+ NS ++ I + Y + RR A +++ VI +F
Sbjct: 30 VFFSIIFMTVGIVSNSLAIAILMKAYQRFRRKSKASFLLLASGLVITDFF 79
>sp|P43088|PF2R_HUMAN Prostaglandin F2-alpha receptor OS=Homo sapiens GN=PTGFR PE=2 SV=1
Length = 359
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 87 PVLISVFFVTLGIMENSSSMDIYNEIYDKGRRLYMAEWVVWPPAQVINFYF 137
V SV F+T+GI+ NS ++ I + Y + R+ A +++ VI +F
Sbjct: 29 SVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFF 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,596,451
Number of Sequences: 539616
Number of extensions: 1969466
Number of successful extensions: 5556
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 5491
Number of HSP's gapped (non-prelim): 56
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)