Your job contains 1 sequence.
>psy5411
MNLTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRN
PQELLFDSASTLYLGQAGPIIKGALDIL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5411
(88 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260660 - symbol:mp "multiplexin" species:7227 "Dr... 156 5.3e-10 1
UNIPROTKB|F1LR02 - symbol:Col18a1 "Protein Col18a1" speci... 134 1.9e-07 1
UNIPROTKB|F1LRI2 - symbol:Col18a1 "Protein Col18a1" speci... 134 2.2e-07 1
MGI|MGI:88451 - symbol:Col18a1 "collagen, type XVIII, alp... 127 1.2e-06 1
UNIPROTKB|F1NYI0 - symbol:F1NYI0 "Uncharacterized protein... 113 2.6e-05 1
UNIPROTKB|P39059 - symbol:COL15A1 "Collagen alpha-1(XV) c... 113 2.9e-05 1
UNIPROTKB|F6Y3U7 - symbol:COL18A1 "Uncharacterized protei... 109 8.4e-05 1
UNIPROTKB|F1NW38 - symbol:COL18A1 "Uncharacterized protei... 108 9.5e-05 1
UNIPROTKB|E2QZK7 - symbol:COL18A1 "Uncharacterized protei... 109 9.9e-05 1
UNIPROTKB|F1NEY6 - symbol:COL18A1 "Uncharacterized protei... 108 0.00010 1
UNIPROTKB|F1MUC5 - symbol:COL15A1 "Uncharacterized protei... 105 0.00021 1
WB|WBGene00000527 - symbol:cle-1 species:6239 "Caenorhabd... 104 0.00022 1
ZFIN|ZDB-GENE-080918-1 - symbol:col15a1a "collagen, type ... 102 0.00036 1
UNIPROTKB|P39060 - symbol:COL18A1 "Collagen alpha-1(XVIII... 102 0.00055 1
UNIPROTKB|F1N6W9 - symbol:COL18A1 "Uncharacterized protei... 100 0.00077 1
>FB|FBgn0260660 [details] [associations]
symbol:mp "multiplexin" species:7227 "Drosophila
melanogaster" [GO:0005581 "collagen" evidence=ISS] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=IMP]
InterPro:IPR010515 Pfam:PF06482 EMBL:AE014296 GO:GO:0005198
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0008045 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00210
GeneTree:ENSGT00700000104250 UniGene:Dm.11036 GeneID:38769
KEGG:dme:Dmel_CG42543 CTD:104327 FlyBase:FBgn0260660
GenomeRNAi:38769 NextBio:810296 RefSeq:NP_001163358.1
ProteinModelPortal:E1JID9 SMR:E1JID9 EnsemblMetazoa:FBtr0301108
OMA:FQNIDEM PhylomeDB:E1JID9 Bgee:E1JID9 Uniprot:E1JID9
Length = 1023
Score = 156 (60.0 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 36/85 (42%), Positives = 53/85 (62%)
Query: 2 NLTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNP 61
N++L+YT + + + +ASF + K+ AL+V D V+ + +CE +T V R P
Sbjct: 130 NVSLVYTQADQ-NIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREP 188
Query: 62 QELLFDSASTLYLGQAGPIIKGALD 86
EL+FDSASTLY+GQAG II G +
Sbjct: 189 IELVFDSASTLYIGQAGSIIGGKFE 213
>UNIPROTKB|F1LR02 [details] [associations]
symbol:Col18a1 "Protein Col18a1" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] InterPro:IPR010363 InterPro:IPR010515
Pfam:PF06121 Pfam:PF06482 GO:GO:0005198 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 SMART:SM00210
GeneTree:ENSGT00700000104270 InterPro:IPR026917
PANTHER:PTHR24023:SF130 IPI:IPI00214859 Ensembl:ENSRNOT00000045315
ArrayExpress:F1LR02 Uniprot:F1LR02
Length = 1528
Score = 134 (52.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 2 NLTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNP 61
N++LLYT+ S TQ ASF +PA G++ FAL V V +V+CEE + R+P
Sbjct: 338 NISLLYTEPGA-SQTQTGASFRLPAFVGQWTHFALSVDGSSVALYVDCEEFQRVPFARSP 396
Query: 62 QELLFDSASTLYLGQAG 78
L + + L++GQAG
Sbjct: 397 HGLELERGAGLFVGQAG 413
>UNIPROTKB|F1LRI2 [details] [associations]
symbol:Col18a1 "Protein Col18a1" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] InterPro:IPR010363 InterPro:IPR010515
InterPro:IPR020067 Pfam:PF01392 Pfam:PF06121 Pfam:PF06482
PROSITE:PS50038 SMART:SM00063 GO:GO:0005615 GO:GO:0005198
GO:GO:0008284 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0030198 GO:GO:0007155
GO:GO:0001525 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0030335
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
SMART:SM00282 GO:GO:0005604 Gene3D:1.10.2000.10 SUPFAM:SSF63501
GO:GO:0001886 SMART:SM00210 InterPro:IPR026917
PANTHER:PTHR24023:SF130 IPI:IPI00951327 Ensembl:ENSRNOT00000066814
ArrayExpress:F1LRI2 Uniprot:F1LRI2
Length = 1771
Score = 134 (52.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 2 NLTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNP 61
N++LLYT+ S TQ ASF +PA G++ FAL V V +V+CEE + R+P
Sbjct: 581 NISLLYTEPGA-SQTQTGASFRLPAFVGQWTHFALSVDGSSVALYVDCEEFQRVPFARSP 639
Query: 62 QELLFDSASTLYLGQAG 78
L + + L++GQAG
Sbjct: 640 HGLELERGAGLFVGQAG 656
>MGI|MGI:88451 [details] [associations]
symbol:Col18a1 "collagen, type XVIII, alpha 1" species:10090
"Mus musculus" [GO:0001525 "angiogenesis" evidence=IDA;IMP]
[GO:0001886 "endothelial cell morphogenesis" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IDA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IMP]
[GO:0030335 "positive regulation of cell migration" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=IEA] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=IDA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR010363 InterPro:IPR010515
InterPro:IPR020067 Pfam:PF01392 Pfam:PF06121 Pfam:PF06482
PROSITE:PS50038 SMART:SM00063 MGI:MGI:88451 GO:GO:0005615
GO:GO:0042493 GO:GO:0046872 GO:GO:0005198 GO:GO:0008284
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0030198 GO:GO:0007155 GO:GO:0001525
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0030335 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0005604 Gene3D:1.10.2000.10
SUPFAM:SSF63501 GO:GO:0001886 SMART:SM00210
GeneTree:ENSGT00700000104270 CTD:80781 HOVERGEN:HBG053241 KO:K06823
ChiTaRS:COL18A1 GO:GO:0051599 InterPro:IPR026917
PANTHER:PTHR24023:SF130 EMBL:U03714 EMBL:U03715 EMBL:U34606
EMBL:U34608 EMBL:U34609 EMBL:U34610 EMBL:U34611 EMBL:U34612
EMBL:U34613 EMBL:U03716 EMBL:U03718 EMBL:U34607 EMBL:AC055777
EMBL:AC159334 EMBL:BC064817 EMBL:BC066080 EMBL:L16898 EMBL:AK031798
EMBL:AK014292 EMBL:U11636 EMBL:U11637 EMBL:L22545 EMBL:D17546
EMBL:AF257775 IPI:IPI00131476 IPI:IPI00230616 IPI:IPI00284816
PIR:A56101 PIR:B56101 RefSeq:NP_001103461.1 RefSeq:NP_034059.2
UniGene:Mm.4352 PDB:1DY0 PDB:1DY1 PDB:1KOE PDBsum:1DY0 PDBsum:1DY1
PDBsum:1KOE ProteinModelPortal:P39061 SMR:P39061 STRING:P39061
PhosphoSite:P39061 PaxDb:P39061 PRIDE:P39061
Ensembl:ENSMUST00000081654 Ensembl:ENSMUST00000105409 GeneID:12822
KEGG:mmu:12822 UCSC:uc007fvg.1 UCSC:uc007fvh.2 InParanoid:P39061
OrthoDB:EOG4BVRTD EvolutionaryTrace:P39061 NextBio:282298
PMAP-CutDB:P39061 Bgee:P39061 CleanEx:MM_COL18A1
Genevestigator:P39061 GermOnline:ENSMUSG00000001435 Uniprot:P39061
Length = 1774
Score = 127 (49.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 2 NLTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNP 61
N++LLYT+ S TQ ASF +PA G++ FAL V V +V+CEE + R
Sbjct: 585 NISLLYTEPGA-SQTQTGASFRLPAFVGQWTHFALSVDGGSVALYVDCEEFQRVPFARAS 643
Query: 62 QELLFDSASTLYLGQAG 78
Q L + + L++GQAG
Sbjct: 644 QGLELERGAGLFVGQAG 660
>UNIPROTKB|F1NYI0 [details] [associations]
symbol:F1NYI0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
InterPro:IPR010515 Pfam:PF06482 GO:GO:0005615 GO:GO:0005198
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007155 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
GO:GO:0005604 SMART:SM00210 GeneTree:ENSGT00700000104250
EMBL:AADN02027355 EMBL:AADN02027358 EMBL:AADN02027356
EMBL:AADN02027357 IPI:IPI00581883 Ensembl:ENSGALT00000020597
OMA:PRATEDH Uniprot:F1NYI0
Length = 1274
Score = 113 (44.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 22/76 (28%), Positives = 45/76 (59%)
Query: 3 LTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNPQ 62
+ + YT+ S ++ ASF +P T ++ +F + V + + F++CEE + + R+ +
Sbjct: 29 IIMYYTEPGS-SISREAASFKVPVMTNRWNRFTVTVQGNNIALFMDCEEYQRVQFQRSDR 87
Query: 63 ELLFDSASTLYLGQAG 78
L+F+S S +++G AG
Sbjct: 88 ALVFESGSGIFVGNAG 103
>UNIPROTKB|P39059 [details] [associations]
symbol:COL15A1 "Collagen alpha-1(XV) chain" species:9606
"Homo sapiens" [GO:0001525 "angiogenesis" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0005582 "collagen type XV" evidence=TAS]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IC] [GO:0007155 "cell adhesion" evidence=IC] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0005788 "endoplasmic reticulum lumen"
evidence=TAS] [GO:0030198 "extracellular matrix organization"
evidence=TAS] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS;IDA]
InterPro:IPR010515 Pfam:PF06482 Reactome:REACT_118779 GO:GO:0016021
GO:GO:0007165 GO:GO:0005615 GO:GO:0030154 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0030198
GO:GO:0007155 GO:GO:0001525 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0005788 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0005604
GO:GO:0005201 SMART:SM00210 EMBL:L25286 EMBL:L25280 EMBL:L25281
EMBL:L25282 EMBL:L25283 EMBL:L25284 EMBL:L25285 EMBL:AF052956
EMBL:AF052957 EMBL:AF052958 EMBL:AF052959 EMBL:AF052960
EMBL:AF052961 EMBL:AF052962 EMBL:AF052963 EMBL:AF052964
EMBL:AF052965 EMBL:AF052966 EMBL:AF052967 EMBL:AF052968
EMBL:AF052969 EMBL:AF052970 EMBL:AF052971 EMBL:AF052972
EMBL:AF052973 EMBL:AF052974 EMBL:AF052975 EMBL:AL136084
EMBL:AL354923 EMBL:D21230 EMBL:L01697 IPI:IPI00295414 PIR:A53317
RefSeq:NP_001846.3 UniGene:Hs.409034 PDB:3N3F PDBsum:3N3F
ProteinModelPortal:P39059 SMR:P39059 IntAct:P39059 STRING:P39059
PhosphoSite:P39059 DMDM:68839886 PaxDb:P39059 PRIDE:P39059
DNASU:1306 Ensembl:ENST00000375001 GeneID:1306 KEGG:hsa:1306
UCSC:uc004azb.1 CTD:1306 GeneCards:GC09P101705 H-InvDB:HIX0008227
HGNC:HGNC:2192 HPA:HPA017913 HPA:HPA017915 MIM:120325
neXtProt:NX_P39059 PharmGKB:PA26708 HOGENOM:HOG000231591
HOVERGEN:HBG080337 InParanoid:P39059 KO:K08135 OMA:GTDVFMG
OrthoDB:EOG4KSPJP ChiTaRS:COL15A1 GenomeRNAi:1306 NextBio:5345
ArrayExpress:P39059 Bgee:P39059 CleanEx:HS_COL15A1
Genevestigator:P39059 GermOnline:ENSG00000204291 GO:GO:0005582
Uniprot:P39059
Length = 1388
Score = 113 (44.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 3 LTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNPQ 62
+ L YT+ +Q A+F +P T ++ +FA+ V + VT VNCEE R+ Q
Sbjct: 134 IILYYTEPGSH-VSQEAAAFSVPVMTHRWNRFAMIVQGEEVTLLVNCEEHSRIPFQRSSQ 192
Query: 63 ELLFDSASTLYLGQAG 78
L F+S++ +++G AG
Sbjct: 193 ALAFESSAGIFMGNAG 208
>UNIPROTKB|F6Y3U7 [details] [associations]
symbol:COL18A1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR010363
InterPro:IPR010515 Pfam:PF06121 Pfam:PF06482 GO:GO:0005198
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
SMART:SM00210 GeneTree:ENSGT00700000104270 OMA:DCEEFQR
InterPro:IPR026917 PANTHER:PTHR24023:SF130
Ensembl:ENSCAFT00000018820 EMBL:AAEX03016653 EMBL:AAEX03016646
EMBL:AAEX03016647 EMBL:AAEX03016648 EMBL:AAEX03016649
EMBL:AAEX03016650 EMBL:AAEX03016651 EMBL:AAEX03016652
Uniprot:F6Y3U7
Length = 1500
Score = 109 (43.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 2 NLTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTA--FVNCEEIESTRVVR 59
++ LLYT+ + T+ ASF +PA TG++ + AL V DG T FV+CE + + R
Sbjct: 317 HVQLLYTEPGA-ARTRTAASFRLPAFTGQWTRLALSV--DGATVALFVDCELFQRVPLER 373
Query: 60 NPQELLFDSASTLYLGQAG 78
+P L + + L++ QAG
Sbjct: 374 SPGGLQLEPGAGLFVAQAG 392
>UNIPROTKB|F1NW38 [details] [associations]
symbol:COL18A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] InterPro:IPR010515 Pfam:PF06482
GO:GO:0005198 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 SMART:SM00210
GeneTree:ENSGT00700000104270 EMBL:AADN02031620 EMBL:AADN02034413
EMBL:AADN02034414 EMBL:AADN02034415 EMBL:AADN02034416
EMBL:AADN02034417 EMBL:AADN02034418 EMBL:AADN02034419
EMBL:AADN02034420 EMBL:AADN02034421 IPI:IPI00596507
Ensembl:ENSGALT00000006920 ArrayExpress:F1NW38 Uniprot:F1NW38
Length = 1340
Score = 108 (43.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 20 ASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNPQELLFDSASTLYLGQAG 78
A+F +P ++ +FA+ V D V +++CEE E R R+P E+ + S L++ QAG
Sbjct: 139 ATFTVPTLLNQWTRFAISVEEDEVILYLDCEEHERVRFERSPDEMELEEGSGLFVAQAG 197
>UNIPROTKB|E2QZK7 [details] [associations]
symbol:COL18A1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR010363
InterPro:IPR010515 InterPro:IPR020067 Pfam:PF01392 Pfam:PF06121
Pfam:PF06482 PROSITE:PS50038 GO:GO:0005198 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 Gene3D:1.10.2000.10
SUPFAM:SSF63501 SMART:SM00210 InterPro:IPR026917
PANTHER:PTHR24023:SF130 Ensembl:ENSCAFT00000018820 Uniprot:E2QZK7
Length = 1736
Score = 109 (43.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 2 NLTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTA--FVNCEEIESTRVVR 59
++ LLYT+ + T+ ASF +PA TG++ + AL V DG T FV+CE + + R
Sbjct: 546 HVQLLYTEPGA-ARTRTAASFRLPAFTGQWTRLALSV--DGATVALFVDCELFQRVPLER 602
Query: 60 NPQELLFDSASTLYLGQAG 78
+P L + + L++ QAG
Sbjct: 603 SPGGLQLEPGAGLFVAQAG 621
>UNIPROTKB|F1NEY6 [details] [associations]
symbol:COL18A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0001886 "endothelial cell morphogenesis" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030335
"positive regulation of cell migration" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
InterPro:IPR010515 InterPro:IPR020067 Pfam:PF01392 Pfam:PF06482
PROSITE:PS50038 GO:GO:0005615 GO:GO:0005198 GO:GO:0008284
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0030198 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043065
GO:GO:0030335 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 GO:GO:0005604 Gene3D:1.10.2000.10
SUPFAM:SSF63501 SMART:SM00210 GeneTree:ENSGT00700000104270
InterPro:IPR026917 PANTHER:PTHR24023:SF130 EMBL:AADN02031620
EMBL:AADN02034413 EMBL:AADN02034414 EMBL:AADN02034415
EMBL:AADN02034416 EMBL:AADN02034417 EMBL:AADN02034418
EMBL:AADN02034419 EMBL:AADN02034420 EMBL:AADN02034421
IPI:IPI00822542 Ensembl:ENSGALT00000039700 ArrayExpress:F1NEY6
Uniprot:F1NEY6
Length = 1403
Score = 108 (43.1 bits), Expect = 0.00010, P = 0.00010
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 20 ASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNPQELLFDSASTLYLGQAG 78
A+F +P ++ +FA+ V D V +++CEE E R R+P E+ + S L++ QAG
Sbjct: 240 ATFTVPTLLNQWTRFAISVEEDEVILYLDCEEHERVRFERSPDEMELEEGSGLFVAQAG 298
>UNIPROTKB|F1MUC5 [details] [associations]
symbol:COL15A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005615 "extracellular space" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR010515
Pfam:PF06482 GO:GO:0005615 GO:GO:0005198 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 GO:GO:0005604 SMART:SM00210
GeneTree:ENSGT00700000104250 OMA:GTDVFMG EMBL:DAAA02023269
EMBL:DAAA02023270 IPI:IPI00691051 UniGene:Bt.20512
Ensembl:ENSBTAT00000013292 NextBio:20790510 Uniprot:F1MUC5
Length = 1386
Score = 105 (42.0 bits), Expect = 0.00021, P = 0.00021
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 5 LLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNPQEL 64
L YT+ + ++ A+FL+P T K+ FA+ V + VT V+CEE R+ Q L
Sbjct: 135 LYYTEPSS-QVSREAAAFLVPVMTHKWNYFAVVVQGEEVTLLVDCEEHGRVPFPRSSQAL 193
Query: 65 LFDSASTLYLGQAG 78
F+ ++ +++G AG
Sbjct: 194 TFEPSAGIFVGNAG 207
>WB|WBGene00000527 [details] [associations]
symbol:cle-1 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0030054 "cell junction"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0007271
"synaptic transmission, cholinergic" evidence=IMP] [GO:0035418
"protein localization to synapse" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] InterPro:IPR003961 InterPro:IPR010515 Pfam:PF00041
Pfam:PF06482 PROSITE:PS50853 SMART:SM00060 EMBL:Z80215
GO:GO:0007411 GO:GO:0001764 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0005198 GO:GO:0030054 SUPFAM:SSF49265 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
GO:GO:0050808 GO:GO:0007271 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0040035 GO:GO:0040039 InterPro:IPR001791 GO:GO:0005604
GO:GO:0035418 EMBL:Z81079 SMART:SM00210
GeneTree:ENSGT00700000104250 HSSP:P39061 CTD:172678 NextBio:876537
UniGene:Cel.16923 GeneID:172678 KEGG:cel:CELE_C36B1.1
RefSeq:NP_492358.3 ProteinModelPortal:G5EGA4 SMR:G5EGA4
IntAct:G5EGA4 PRIDE:G5EGA4 EnsemblMetazoa:C36B1.1d
WormBase:C36B1.1d Uniprot:G5EGA4
Length = 1175
Score = 104 (41.7 bits), Expect = 0.00022, P = 0.00022
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 8 TDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNPQELLFD 67
T+++ + I SFL+ + ++ +FAL+V VT + C S +V P + FD
Sbjct: 497 TNISLIVRSVAIVSFLVEDFSQQWTQFALEVVDQTVTFYFKCRRFASRQVTSLP-DFSFD 555
Query: 68 SASTLYLGQAGPIIKGALD 86
A LY+ AGPII +
Sbjct: 556 EAEKLYIASAGPIIDNGFE 574
>ZFIN|ZDB-GENE-080918-1 [details] [associations]
symbol:col15a1a "collagen, type XV, alpha 1a"
species:7955 "Danio rerio" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0060034 "notochord cell differentiation" evidence=IMP]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0005581 "collagen" evidence=IEA] InterPro:IPR010515
Pfam:PF06482 ZFIN:ZDB-GENE-080918-1 GO:GO:0005198
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007155 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
SMART:SM00282 GO:GO:0060034 GO:GO:0007519 SMART:SM00210
EMBL:BC168501 IPI:IPI00634780 UniGene:Dr.85511 HOVERGEN:HBG104393
Uniprot:B5DE26
Length = 1182
Score = 102 (41.0 bits), Expect = 0.00036, P = 0.00036
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 5 LLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNPQEL 64
L YT+ TQ A+F + TG++ F+L V V + +CE ++S R+ + L
Sbjct: 134 LYYTEAGA-ERTQEAAAFKMAELTGRWASFSLSVQRGEVQLWADCERVQSATFSRSLEPL 192
Query: 65 LFDSASTLYLGQAG 78
+F S + +++G AG
Sbjct: 193 IFHSRAGIFIGNAG 206
>UNIPROTKB|P39060 [details] [associations]
symbol:COL18A1 "Collagen alpha-1(XVIII) chain" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001886 "endothelial cell morphogenesis"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0009887 "organ morphogenesis" evidence=TAS]
[GO:0007601 "visual perception" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0031012
"extracellular matrix" evidence=IDA;TAS] InterPro:IPR010363
InterPro:IPR010515 InterPro:IPR020067 Pfam:PF01392 Pfam:PF06121
Pfam:PF06482 PROSITE:PS50038 SMART:SM00063 Reactome:REACT_118779
GO:GO:0008285 GO:GO:0005615 GO:GO:0042493 GO:GO:0046872
GO:GO:0005198 GO:GO:0008284 GO:GO:0007601
Pathway_Interaction_DB:hnf3apathway Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0030198
GO:GO:0007155 GO:GO:0001525 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0043065 GO:GO:0009887 GO:GO:0005788 GO:GO:0030335
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0005604
Orphanet:1571 Gene3D:1.10.2000.10 SUPFAM:SSF63501 GO:GO:0001886
SMART:SM00210 EMBL:AF018081 EMBL:AF018082 EMBL:AY484971
EMBL:AY484968 EMBL:AY484969 EMBL:AY484970 EMBL:AY484967
EMBL:AL163302 EMBL:BX322561 EMBL:BC033715 EMBL:BC063833 EMBL:L22548
EMBL:AF416592 EMBL:AF184060 EMBL:AF333247 IPI:IPI00022822
IPI:IPI00414694 IPI:IPI00783931 RefSeq:NP_085059.2
RefSeq:NP_569712.2 UniGene:Hs.517356 PDB:1BNL PDB:3HON PDB:3HSH
PDBsum:1BNL PDBsum:3HON PDBsum:3HSH ProteinModelPortal:P39060
SMR:P39060 IntAct:P39060 STRING:P39060 GlycoSuiteDB:P39060
PhosphoSite:P39060 DMDM:215274264 PaxDb:P39060 PRIDE:P39060
Ensembl:ENST00000355480 Ensembl:ENST00000359759
Ensembl:ENST00000400337 GeneID:80781 KEGG:hsa:80781 CTD:80781
GeneCards:GC21P046825 HGNC:HGNC:2195 HPA:CAB001961 HPA:HPA011025
MIM:120328 MIM:267750 neXtProt:NX_P39060 PharmGKB:PA26711
HOVERGEN:HBG053241 InParanoid:P39060 KO:K06823 OMA:DCEEFQR
ChiTaRS:COL18A1 EvolutionaryTrace:P39060 GenomeRNAi:80781
NextBio:71187 ArrayExpress:P39060 Bgee:P39060 Genevestigator:P39060
GermOnline:ENSG00000182871 GO:GO:0051599 InterPro:IPR026917
PANTHER:PTHR24023:SF130 Uniprot:P39060
Length = 1754
Score = 102 (41.0 bits), Expect = 0.00056, P = 0.00055
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 2 NLTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTAFVNCEEIESTRVVRNP 61
+++LLYT+ T ASF +PA G++ AL V V +V+CEE + + R+
Sbjct: 549 DISLLYTEPGA-GQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSS 607
Query: 62 QELLFDSASTLYLGQAG 78
+ L + + L++ QAG
Sbjct: 608 RGLELEPGAGLFVAQAG 624
>UNIPROTKB|F1N6W9 [details] [associations]
symbol:COL18A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001886 "endothelial cell morphogenesis" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR010363
InterPro:IPR010515 Pfam:PF06121 Pfam:PF06482 GO:GO:0005615
GO:GO:0005198 GO:GO:0008284 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0030198 GO:GO:0007155
GO:GO:0001525 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043065
GO:GO:0030335 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 GO:GO:0005604 GO:GO:0001886
SMART:SM00210 GeneTree:ENSGT00700000104270 OMA:DCEEFQR
InterPro:IPR026917 PANTHER:PTHR24023:SF130 EMBL:DAAA02003491
EMBL:DAAA02003489 EMBL:DAAA02003490 IPI:IPI00711933
Ensembl:ENSBTAT00000034655 Uniprot:F1N6W9
Length = 1508
Score = 100 (40.3 bits), Expect = 0.00077, P = 0.00077
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 2 NLTLLYTDVTKFSTTQPIASFLIPAPTGKYFKFALKVTLDGVTA--FVNCEEIESTRVVR 59
++ LLYT+ + T+ ASF +PA G++ + AL V DG A FV+C+E++ +
Sbjct: 320 HMQLLYTEPGA-THTRTAASFELPALDGRWTRLALSV--DGAYARLFVDCKEVQGQPLAH 376
Query: 60 NPQELLFDSASTLYLGQAG 78
+ +L + + L++ QAG
Sbjct: 377 SLHDLQLEPDARLFVAQAG 395
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 88 88 0.00091 102 3 11 22 0.44 29
29 0.49 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 446 (48 KB)
Total size of DFA: 81 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 9.06u 0.09s 9.15t Elapsed: 00:00:02
Total cpu time: 9.06u 0.09s 9.15t Elapsed: 00:00:03
Start: Thu Aug 15 11:03:37 2013 End: Thu Aug 15 11:03:40 2013