BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5413
(285 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q21890|YF64_CAEEL Uncharacterized protein R102.4 OS=Caenorhabditis elegans GN=R102.4
PE=2 SV=3
Length = 413
Score = 210 bits (534), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 146/227 (64%), Gaps = 17/227 (7%)
Query: 68 TVDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTM 127
++D+RSDT++ P++EM+ M VGDDVY ED T L+++ A+L GKEA +FV SGTM
Sbjct: 66 SIDLRSDTVTVPSVEMRRAMAEAIVGDDVYGEDTTTNRLEQRCAELFGKEAGLFVTSGTM 125
Query: 128 GNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDL 187
GNL+AIM HC +R EIIVG +HI WEQG Y+Q + + + DGT DL
Sbjct: 126 GNLLAIMAHC-QRGEEIIVGRYNHIHRWEQGN------YAQFAGISATTLEVKPDGTMDL 178
Query: 188 DEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGAR 247
+++E D H ++ L+C+ENTHNY GG LP++W+R +K + ++ VHMDGAR
Sbjct: 179 NDIEQAIRVKD-CHMPASKLICIENTHNYTGGKALPIEWMRSVKQLAERRDLKVHMDGAR 237
Query: 248 L---------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQK 285
+ ++++ + DTV C SKGLGAPVGSI+ GP++FI +
Sbjct: 238 IYNAAVASNCSVSKIASFADTVQMCFSKGLGAPVGSIVVGPKDFIDR 284
>sp|O07051|LTAA_AERJA L-allo-threonine aldolase OS=Aeromonas jandaei GN=ltaA PE=1 SV=1
Length = 338
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 143/229 (62%), Gaps = 20/229 (8%)
Query: 66 IRTVDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSG 125
+R +D+RSDT+++PT M+ M + EVGDDVY EDP L+ A L GKEAA+FVPSG
Sbjct: 1 MRYIDLRSDTVTQPTDAMRQCMLHAEVGDDVYGEDPGVNALEAYGADLLGKEAALFVPSG 60
Query: 126 TMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTF 185
TM NL+A+M+HC R + ++ G +HI +E G+ + +G V ++ V Q DG+
Sbjct: 61 TMSNLLAVMSHCQRGEGAVL-GSAAHIYRYEAQGS------AVLGSVALQPVPMQADGSL 113
Query: 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245
L ++ A + D++H T LVC+ENTHN G VLP+ +LRE++ EH + +H+DG
Sbjct: 114 ALADVRAAIAP-DDVHFTPTRLVCLENTHN---GKVLPLPYLREMRELVDEHGLQLHLDG 169
Query: 246 ARL---------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQK 285
ARL + E+ A D+V CLSKGLGAPVGS+L G FI +
Sbjct: 170 ARLFNAVVASGHTVRELVAPFDSVSICLSKGLGAPVGSLLVGSHAFIAR 218
>sp|P75823|LTAE_ECOLI Low specificity L-threonine aldolase OS=Escherichia coli (strain
K12) GN=ltaE PE=1 SV=1
Length = 333
Score = 181 bits (459), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 141/226 (62%), Gaps = 20/226 (8%)
Query: 69 VDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMG 128
+D+RSDT+++P+ M M VGDDVY +DPT LQ+ AA+L+GKEAAIF+P+GT
Sbjct: 2 IDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQA 61
Query: 129 NLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLD 188
NL+A+++HC+R + E IVG +H L+E GGA + +G + + + DGT LD
Sbjct: 62 NLVALLSHCERGE-EYIVGQAAHNYLFEAGGA------AVLGSIQPQPIDAAADGTLPLD 114
Query: 189 EMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
++ K D+IH A T L+ +ENTHN G VLP ++L+E +E N+ +H+DGAR+
Sbjct: 115 KVAMKIKP-DDIHFARTKLLSLENTHN---GKVLPREYLKEAWEFTRERNLALHVDGARI 170
Query: 249 ---------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQK 285
L E+ D+ CLSKGLG PVGS+L G ++I++
Sbjct: 171 FNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKR 216
>sp|P58319|LTAE_ECO57 Low specificity L-threonine aldolase OS=Escherichia coli O157:H7
GN=ltaE PE=3 SV=1
Length = 333
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 141/226 (62%), Gaps = 20/226 (8%)
Query: 69 VDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMG 128
+D+RSDT+++P+ M M VGDDVY +DPT LQ+ AA+L+GKEAAIF+P+GT
Sbjct: 2 IDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQA 61
Query: 129 NLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLD 188
NL+A+++HC+R + E IVG +H L+E GGA + +G + + + DGT LD
Sbjct: 62 NLVALLSHCERGE-EYIVGQAAHNYLFEAGGA------AVLGSIQPQPIDAAADGTLPLD 114
Query: 189 EMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
++ K D+IH A T L+ +ENTHN G VLP ++L++ +E N+ +H+DGAR+
Sbjct: 115 KVAMKIKP-DDIHFARTKLLSLENTHN---GKVLPREYLKDAWEFTRERNLALHVDGARI 170
Query: 249 ---------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQK 285
L E+ D+ CLSKGLG PVGS+L G ++I++
Sbjct: 171 FNAVVAYGSELKELTQYCDSFTICLSKGLGTPVGSLLVGNRDYIKR 216
>sp|O13940|GLY1_SCHPO Probable low-specificity L-threonine aldolase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gly1 PE=3 SV=1
Length = 376
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 127/225 (56%), Gaps = 18/225 (8%)
Query: 70 DIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGN 129
D RSDT++ PT EM+ M+ GD VY ED ++L+ AKL GKEAA+FV SGT GN
Sbjct: 30 DFRSDTLTVPTDEMRRIMYEASDGDCVYEEDEDTRKLEVYVAKLTGKEAALFVTSGTQGN 89
Query: 130 LIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDE 189
+ I +H + II D +HI WE G +++Q ++R ++ + + +E
Sbjct: 90 QLCIRSHLHQPPHSIICDDRAHIYNWEAGA---IGLFTQ---AIVRPISPKNNVYITAEE 143
Query: 190 MEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL- 248
+E K ++IH + T L+C+ENT G V+P+ + + + H IP+H DGARL
Sbjct: 144 IENKLILGNDIHFSPTGLICLENT---IKGAVVPLDEVARISGLAKAHKIPLHCDGARLW 200
Query: 249 --------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQK 285
+ E C+ D+V CLSKGL APVGSI+ GP +FI K
Sbjct: 201 DAAVASNVSIKEYCSYFDSVSLCLSKGLAAPVGSIIVGPRDFIAK 245
>sp|P37303|GLY1_YEAST Low specificity L-threonine aldolase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GLY1 PE=1 SV=2
Length = 387
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 120/226 (53%), Gaps = 19/226 (8%)
Query: 70 DIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGN 129
D+RSDT + PT EM +GD VY ED L++ A++AGKEA +F SGT+ N
Sbjct: 16 DLRSDTFTTPTAEMMEAALEASIGDAVYGEDVDTVRLEQTVARMAGKEAGLFCVSGTLSN 75
Query: 130 LIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDE 189
IAI TH + I+ +H+ E G + S + ++ V L++
Sbjct: 76 QIAIRTHLMQPPYSILCDYRAHVYTHEAAGLAILS------QAMVVPVVPSNGDYLTLED 129
Query: 190 MEAKFSTAD-NIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+++ + D +IH A T L+ +ENT + G V P++ L +KA C E+ + +H DGAR+
Sbjct: 130 IKSHYVPDDGDIHGAPTRLISLENTLH---GIVYPLEELVRIKAWCMENGLKLHCDGARI 186
Query: 249 ---------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQK 285
PL + D++ CLSK +GAP+GS+L G +F++K
Sbjct: 187 WNAAAQSGVPLKQYGEIFDSISICLSKSMGAPIGSVLVGNLKFVKK 232
>sp|O13427|GLY1_CANAX Low-specificity L-threonine aldolase OS=Candida albicans GN=GLY1
PE=3 SV=1
Length = 374
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 70 DIRSDTISKPTMEM-KNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMG 128
+ RSDT + PT M ++ N GD VY ED T L+ K ++ GK AA+F SGTM
Sbjct: 14 EFRSDTFTVPTRAMVEDGFMNATFGDSVYQEDETTLRLESKMCEITGKPAALFCVSGTMS 73
Query: 129 NLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLD 188
N I + + + I+ +H+ L E GG + S + ++ V +
Sbjct: 74 NQIGLRANLVQPPYSILCDYRAHVFLHEAGGLATLS------QAMVHPVRPSNGNYLTFE 127
Query: 189 EMEAKFSTAD--NIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246
++ + D +IH A T ++ +ENT G ++P++ +R++ C+E++I +H+DGA
Sbjct: 128 DVLGNVTYDDDGDIHAAPTKVISLENT---LHGIIIPIEEIRKISEFCRENDIRLHLDGA 184
Query: 247 RL---------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQK 285
RL + E C+ D+V CLSK LGAP+GS+L G E+FI+K
Sbjct: 185 RLWNASVATGISIKEYCSYFDSVSLCLSKSLGAPIGSVLVGDEKFIRK 232
>sp|Q9UW18|TOXG_COCCA Alanine racemase TOXG OS=Cochliobolus carbonum GN=TOXG PE=3 SV=1
Length = 389
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 121/225 (53%), Gaps = 18/225 (8%)
Query: 70 DIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGN 129
D RSD I++P++ M + + +GDDV+ ED T + A+++G+E +FV +GTM N
Sbjct: 39 DFRSDVITRPSLRMLSAVLKTTLGDDVFREDLTTAHFEAHVAEISGREEGMFVITGTMAN 98
Query: 130 LIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDE 189
+ + R I++ SH + +E GG+S S +++ V +++
Sbjct: 99 QLCLHALVSTRPCGILLSSESHAIHYEAGGSSMLS------GAMLQPVQPSNGKYLRVED 152
Query: 190 MEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL- 248
+E D++H TS+V +ENT GG V+P+ LR ++ +++N+ H+DGARL
Sbjct: 153 LEEHAILTDDVHKCPTSIVSMENT---AGGAVVPVHELRRIRDWAKQNNVRTHLDGARLF 209
Query: 249 --------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQK 285
L E C+ +D V SK LGAP+G+++ G ++ IQ+
Sbjct: 210 EAVATGAGTLKEYCSLIDLVSVDFSKNLGAPMGAMILGDKKLIQQ 254
>sp|O74267|GLY1_ASHGO Low-specificity L-threonine aldolase OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=GLY1 PE=3 SV=3
Length = 382
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 118/226 (52%), Gaps = 19/226 (8%)
Query: 70 DIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGN 129
D RSDT + PT EM +GD VY ED +L++ AKLAG EA +F SGT+ N
Sbjct: 17 DFRSDTFTTPTREMIEAALTATIGDAVYQEDIDTLKLEQHVAKLAGMEAGMFCVSGTLSN 76
Query: 130 LIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDE 189
IA+ TH + I+ +H+ E G + S + ++ V L++
Sbjct: 77 QIALRTHLTQPPYSILCDYRAHVYTHEAAGLAILS------QAMVTPVIPSNGNYLTLED 130
Query: 190 MEAKFSTAD-NIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
++ + D +IH A T ++ +ENT G + P++ L +KA C E+++ +H DGAR+
Sbjct: 131 IKKHYIPDDGDIHGAPTKVISLENT---LHGIIHPLEELVRIKAWCMENDLRLHCDGARI 187
Query: 249 ---------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQK 285
PL + D++ CLSK +GAP+GSIL G +FI+K
Sbjct: 188 WNASAESGVPLKQYGELFDSISICLSKSMGAPMGSILVGSHKFIKK 233
>sp|A1JJH3|TNAA_YERE8 Tryptophanase OS=Yersinia enterocolitica serotype O:8 / biotype 1B
(strain 8081) GN=tnaA PE=3 SV=1
Length = 466
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 183 GTFDLDEMEAKFST--ADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIP 240
G FDLD+++A + ADN+ T++ C N GG + M +RE+ Q+HNIP
Sbjct: 164 GDFDLDQLKATIAEYGADNVVSIITTVTC-----NSSGGQPISMSNMREVYRIAQQHNIP 218
Query: 241 VHMDGARL 248
V +D AR
Sbjct: 219 VVIDSARF 226
>sp|Q9CL27|TNAA_PASMU Tryptophanase OS=Pasteurella multocida (strain Pm70) GN=tnaA PE=3
SV=1
Length = 471
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 22/193 (11%)
Query: 69 VDIRSDT-ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTM 127
+D+ +D+ T EM+ M GD+ Y + L ++ G E I G
Sbjct: 48 IDLLTDSGTGAVTQEMQAAMLR---GDEAYSGSRSYHALANAVKEIFGYEYTIPTHQGRG 104
Query: 128 GNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK------ 181
I I +R+ E + D S ++++ T +SQI +R V ++
Sbjct: 105 AEQIYIPVLIKKREQEKGL-DRSKMVVFSNYFFDTTQGHSQINGATVRNVYTKEAFDTSV 163
Query: 182 ----DGTFDLDEMEAKFST--ADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQ 235
G FDL+++E A+N+ ++ C N GG + + +R + +
Sbjct: 164 NADFKGDFDLEKLEQGIQEVGAENVPYIVCTITC-----NSAGGQPVSLANMRAMYEIAK 218
Query: 236 EHNIPVHMDGARL 248
+++IPV MD AR
Sbjct: 219 KYDIPVVMDSARF 231
>sp|Q7N8C9|TNAA_PHOLL Tryptophanase OS=Photorhabdus luminescens subsp. laumondii (strain
TT01) GN=tnaA PE=3 SV=1
Length = 466
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 20/169 (11%)
Query: 92 VGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSH 151
+GD+ Y L +K +L G + I G I T R+ ++ G +H
Sbjct: 66 MGDEAYAGSRNYYHLCDKVNELIGYQYTIPTHQGRGAEQILFPTLIARKKAQ---GGATH 122
Query: 152 IMLWEQGGASQTSVYSQIGRVLMRGVTNQK----------DGTFDLDEMEAKFST--ADN 199
+ T+ + ++ V K G FD+DE+E + ADN
Sbjct: 123 PVFISNFHFDTTAAHVELNGAKAINVVTSKAFDTTTYYDWKGDFDIDELEKTIAEHGADN 182
Query: 200 IHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ T++ C N GG + + ++ + ++H+IPV +D AR
Sbjct: 183 VVAIITTVTC-----NSSGGQPISLANMKAVYEIAKQHDIPVVIDSARF 226
>sp|A8G097|TNAA_SHESH Tryptophanase OS=Shewanella sediminis (strain HAW-EB3) GN=tnaA PE=3
SV=1
Length = 465
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 183 GTFDLDEMEAKFST--ADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIP 240
G FDLD++ +T A+NI T++ C N GG + M +R + Q+H+IP
Sbjct: 164 GDFDLDKLRDTIATYGANNIAAIITTVTC-----NSSGGQPVSMANMRAVYEIAQKHDIP 218
Query: 241 VHMDGAR 247
V +D AR
Sbjct: 219 VVIDSAR 225
>sp|A7HMM1|BIOF_FERNB 8-amino-7-oxononanoate synthase OS=Fervidobacterium nodosum (strain
ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1307 PE=3 SV=1
Length = 395
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 25/190 (13%)
Query: 104 KELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQT 163
+EL++ A+ G +A IF+ SG + N AI T + II + +H + + S+
Sbjct: 87 EELEKALAEFKGADATIFLQSGFIANQAAIPTVFGDENDAIISDELNHASIIDGVRLSKA 146
Query: 164 SVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLP 223
Y V D++E+EA+ A ++ A L+ + + G + P
Sbjct: 147 KRY----------VYKHN----DMNELEARLKEARDVQKARRILIITDGVFS-MDGDIAP 191
Query: 224 MQWLRELKARCQ-------EHNIPVHMDGAR--LPLAEVCASVDTVMFCLSKGLGAPVGS 274
+ + EL + + H V G R + + VD + LSK G +G
Sbjct: 192 LPEIVELAEKYEAAVMVDDAHGEGVLGRGGRGIVDHFGLHGRVDMEIGTLSKAFGV-LGG 250
Query: 275 ILAGPEEFIQ 284
+AG E I+
Sbjct: 251 YIAGKETLIR 260
>sp|A8AKE2|TNAA_CITK8 Tryptophanase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC
4225-83 / SGSC4696) GN=tnaA PE=3 SV=1
Length = 462
Score = 38.5 bits (88), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 183 GTFDLDEMEAKFST--ADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIP 240
G FD+D + A + A+N+ T++ C N GG + + +RE+ + HNIP
Sbjct: 160 GNFDIDLLNATIAEHGAENVAAIITTVTC-----NSSGGQPVSIANMREVYQIAKRHNIP 214
Query: 241 VHMDGARL 248
V +D AR
Sbjct: 215 VVIDSARF 222
>sp|A5EYI0|TNAA_VIBC3 Tryptophanase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 /
Ogawa 395 / O395) GN=tnaA PE=3 SV=1
Length = 472
Score = 38.1 bits (87), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 24/194 (12%)
Query: 69 VDIRSDT-ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTM 127
+D+ +D+ T EM+ MF GD+ Y + L + G E I G
Sbjct: 48 IDLLTDSGTGAITQEMQAAMFR---GDEAYSGSRSYHALARAVKDIFGYEYTIPTHQGRG 104
Query: 128 GNLIAIMTHCDRRDSEI------IVGDCSHIMLWEQGGAS-----QTSVYSQIGRVLMRG 176
I I +R+ E +V ++ QG +VY++ G
Sbjct: 105 AEQIYIPVLIKKREKEKGLDRSKMVALSNYFFDTTQGHTQINCCVAKNVYTE--EAFDTG 162
Query: 177 VTNQKDGTFDLDEMEAKFSTAD--NIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARC 234
V G FDL+++E A N+ +++ C N GG + + L+ +
Sbjct: 163 VKADFKGNFDLEKLEQAILEAGPANVPYIVSTITC-----NSAGGQPVSIANLKAVYEIA 217
Query: 235 QEHNIPVHMDGARL 248
Q ++IPV MD AR
Sbjct: 218 QRYDIPVIMDSARF 231
>sp|C3LUI5|TNAA_VIBCM Tryptophanase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=tnaA
PE=3 SV=1
Length = 472
Score = 38.1 bits (87), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 24/194 (12%)
Query: 69 VDIRSDT-ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTM 127
+D+ +D+ T EM+ MF GD+ Y + L + G E I G
Sbjct: 48 IDLLTDSGTGAITQEMQAAMFR---GDEAYSGSRSYHALARAVKDIFGYEYTIPTHQGRG 104
Query: 128 GNLIAIMTHCDRRDSEI------IVGDCSHIMLWEQGGAS-----QTSVYSQIGRVLMRG 176
I I +R+ E +V ++ QG +VY++ G
Sbjct: 105 AEQIYIPVLIKKREKEKGLDRSKMVALSNYFFDTTQGHTQINCCVAKNVYTE--EAFDTG 162
Query: 177 VTNQKDGTFDLDEMEAKFSTAD--NIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARC 234
V G FDL+++E A N+ +++ C N GG + + L+ +
Sbjct: 163 VKADFKGNFDLEKLEQAILEAGPANVPYIVSTITC-----NSAGGQPVSIANLKAVYEIA 217
Query: 235 QEHNIPVHMDGARL 248
Q ++IPV MD AR
Sbjct: 218 QRYDIPVIMDSARF 231
>sp|Q9KN05|TNAA_VIBCH Tryptophanase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 /
El Tor Inaba N16961) GN=tnaA PE=3 SV=1
Length = 472
Score = 38.1 bits (87), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 24/194 (12%)
Query: 69 VDIRSDT-ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTM 127
+D+ +D+ T EM+ MF GD+ Y + L + G E I G
Sbjct: 48 IDLLTDSGTGAITQEMQAAMFR---GDEAYSGSRSYHALARAVKDIFGYEYTIPTHQGRG 104
Query: 128 GNLIAIMTHCDRRDSEI------IVGDCSHIMLWEQGGAS-----QTSVYSQIGRVLMRG 176
I I +R+ E +V ++ QG +VY++ G
Sbjct: 105 AEQIYIPVLIKKREKEKGLDRSKMVALSNYFFDTTQGHTQINCCVAKNVYTE--EAFDTG 162
Query: 177 VTNQKDGTFDLDEMEAKFSTAD--NIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARC 234
V G FDL+++E A N+ +++ C N GG + + L+ +
Sbjct: 163 VKADFKGNFDLEKLEQAILEAGPANVPYIVSTITC-----NSAGGQPVSIANLKAVYEIA 217
Query: 235 QEHNIPVHMDGARL 248
Q ++IPV MD AR
Sbjct: 218 QRYDIPVIMDSARF 231
>sp|Q8DJ97|BIOF_THEEB Putative 8-amino-7-oxononanoate synthase OS=Thermosynechococcus
elongatus (strain BP-1) GN=bioF PE=3 SV=1
Length = 391
Score = 37.7 bits (86), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 16/125 (12%)
Query: 105 ELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDC-SHIMLWEQGGASQT 163
+L+ A+ G EAA+ SGT NL I D+RD +++GD +H L + S
Sbjct: 90 QLERAIAQWKGTEAALVFSSGTAANLGTIAALVDQRD--LVLGDAYNHACLKKGARLSHA 147
Query: 164 SVYS-------------QIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCV 210
+ Y + R R DG F +D A + + A T++V V
Sbjct: 148 TFYEYPHNNVAALAQLLETHRSQYRRCLILTDGVFSMDGDVAPLAKILALAEAYTAMVLV 207
Query: 211 ENTHN 215
++ H
Sbjct: 208 DDAHG 212
>sp|Q59342|TNAA_ENTAE Tryptophanase OS=Enterobacter aerogenes GN=tnaA PE=3 SV=1
Length = 462
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 24/169 (14%)
Query: 92 VGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSH 151
+GD+ Y + L EK ++ G I G I + RR S +H
Sbjct: 66 MGDEAYAGSRNYQHLCEKVKEIIGYPYTIPTHQGRGAEQILFPSLIARRKS-------AH 118
Query: 152 IMLWEQGGASQTSVYSQIGRVLMRGVTNQK----------DGTFDLDEMEAKFST--ADN 199
+ T+ + ++ V K G FD+D ++A + A+N
Sbjct: 119 PVFISNFHFDTTAAHVELNGAKAINVVTPKAFDTTSWYDWKGNFDIDLLKATIAEHGAEN 178
Query: 200 IHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ T++ C N GG + + +RE+ +++NIPV +D AR
Sbjct: 179 VAAIITTVTC-----NSSGGQPVSLANMREVYQIARQNNIPVVIDSARF 222
>sp|B1LL35|TNAA_ECOSM Tryptophanase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=tnaA
PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|A8A6H0|TNAA_ECOHS Tryptophanase OS=Escherichia coli O9:H4 (strain HS) GN=tnaA PE=3
SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B2TUR7|TNAA_SHIB3 Tryptophanase OS=Shigella boydii serotype 18 (strain CDC 3083-94 /
BS512) GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B7LK50|TNAA_ESCF3 Tryptophanase OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B5YXB2|TNAA_ECO5E Tryptophanase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|Q8XB34|TNAA_ECO57 Tryptophanase OS=Escherichia coli O157:H7 GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|P0A854|TNAA_SHIFL Tryptophanase OS=Shigella flexneri GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|Q0SYP7|TNAA_SHIF8 Tryptophanase OS=Shigella flexneri serotype 5b (strain 8401)
GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B6I3U1|TNAA_ECOSE Tryptophanase OS=Escherichia coli (strain SE11) GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B7NF25|TNAA_ECOLU Tryptophanase OS=Escherichia coli O17:K52:H18 (strain UMN026 /
ExPEC) GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|P0A853|TNAA_ECOLI Tryptophanase OS=Escherichia coli (strain K12) GN=tnaA PE=1 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B1IX30|TNAA_ECOLC Tryptophanase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|Q0TB00|TNAA_ECOL5 Tryptophanase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B1X9T7|TNAA_ECODH Tryptophanase OS=Escherichia coli (strain K12 / DH10B) GN=tnaA PE=3
SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|C4ZYY6|TNAA_ECOBW Tryptophanase OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B7M560|TNAA_ECO8A Tryptophanase OS=Escherichia coli O8 (strain IAI1) GN=tnaA PE=3
SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B7N212|TNAA_ECO81 Tryptophanase OS=Escherichia coli O81 (strain ED1a) GN=tnaA PE=3
SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B7NR10|TNAA_ECO7I Tryptophanase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC)
GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B7L853|TNAA_ECO55 Tryptophanase OS=Escherichia coli (strain 55989 / EAEC) GN=tnaA
PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B7MGC9|TNAA_ECO45 Tryptophanase OS=Escherichia coli O45:K1 (strain S88 / ExPEC)
GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|B7UMH5|TNAA_ECO27 Tryptophanase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|A7ZTR3|TNAA_ECO24 Tryptophanase OS=Escherichia coli O139:H28 (strain E24377A / ETEC)
GN=tnaA PE=3 SV=1
Length = 471
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231
>sp|Q05AK6|ABH2B_DANRE Abhydrolase domain-containing protein 2-B OS=Danio rerio GN=abhd2b
PE=2 SV=1
Length = 422
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 13/66 (19%)
Query: 153 MLWEQGGASQTSVYSQIGRVL------MRGVTNQKDG---TFDLDEMEAKFSTADNIHCA 203
+LW + G QT++Y +IGRV +R +DG TFDL E + ST D+I
Sbjct: 76 LLWGKSGHLQTALYGKIGRVKSPKPCGLRKFLPMQDGATATFDLFEPQGVHSTGDDI--- 132
Query: 204 STSLVC 209
T ++C
Sbjct: 133 -TMVIC 137
>sp|Q9CMK9|TPL_PASMU Tyrosine phenol-lyase OS=Pasteurella multocida (strain Pm70) GN=tpl
PE=3 SV=1
Length = 458
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 198 DNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGAR 247
D + +C+ T N GG + M +RE+KA C +H I V D R
Sbjct: 169 DEVGADKIPYICLAVTVNLAGGQPVSMANMREVKALCSKHGIKVMFDATR 218
>sp|Q8FBV2|TNAA_ECOL6 Tryptophanase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=tnaA PE=3 SV=2
Length = 471
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 93 GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152
GD+ Y + L E + G + I G I I +R+ E + D S +
Sbjct: 70 GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL-DRSKM 128
Query: 153 MLWEQGGASQTSVYSQIGRVLMR----------GVTNQKDGTFDLDEMEAKFSTADNIHC 202
+ + T +SQI +R GV G FDL+ +E + +
Sbjct: 129 VAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLE---RGIEEVGP 185
Query: 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
+ + T N GG + + L+ + + ++++IPV MD AR
Sbjct: 186 NNVPYIVATITSNSAGGQPVSLANLKVMYSIAKKYDIPVVMDSARF 231
>sp|O07674|TNAA_HAEIF Tryptophanase OS=Haemophilus influenzae GN=tnaA PE=3 SV=1
Length = 472
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 22/193 (11%)
Query: 69 VDIRSDT-ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTM 127
+D+ +D+ T +M+ M GD+ Y + L + + G E I G
Sbjct: 48 IDLLTDSGTGAVTQDMQAAMLR---GDEAYSGSRSYYALAKAVKDIFGYEYTIPTHQGRG 104
Query: 128 GNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK------ 181
I I +R+ E + D S ++++ T +SQI +R V ++
Sbjct: 105 AEQIYIPVLIAKREREKGL-DRSKMVVFSNYFFDTTQGHSQINGATVRNVYIKEAFDTTA 163
Query: 182 ----DGTFDLDEMEAKF--STADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQ 235
G FDL+++E + A N+ ++ C N GG + + L+ + +
Sbjct: 164 KHPFKGNFDLEKLEKGIQEAGAHNVPYIVCTITC-----NSAGGQPVSIANLKGMYEIAR 218
Query: 236 EHNIPVHMDGARL 248
+++IPV MD AR
Sbjct: 219 KYDIPVIMDSARF 231
>sp|Q4QML4|TNAA_HAEI8 Tryptophanase OS=Haemophilus influenzae (strain 86-028NP) GN=tnaA
PE=3 SV=1
Length = 472
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 22/193 (11%)
Query: 69 VDIRSDT-ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTM 127
+D+ +D+ T +M+ M GD+ Y + L + + G E I G
Sbjct: 48 IDLLTDSGTGAVTQDMQAAMLR---GDEAYSGSRSYYALAKAVKDIFGYEYTIPTHQGRG 104
Query: 128 GNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK------ 181
I I +R+ E + D S ++++ T +SQI +R V ++
Sbjct: 105 AEQIYIPVLIAKREREKGL-DRSKMVVFSNYFFDTTQGHSQINGATVRNVYIKEAFDTTA 163
Query: 182 ----DGTFDLDEMEAKF--STADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQ 235
G FDL+++E + A N+ ++ C N GG + + L+ + +
Sbjct: 164 KHPFKGNFDLEKLEKGIQEAGAHNVPYIVCTITC-----NSAGGQPVSIANLKGMYEIAR 218
Query: 236 EHNIPVHMDGARL 248
+++IPV MD AR
Sbjct: 219 KYDIPVIMDSARF 231
>sp|P37536|YAAO_BACSU Uncharacterized protein YaaO OS=Bacillus subtilis (strain 168)
GN=yaaO PE=3 SV=1
Length = 480
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 94 DDVYLEDPTCKELQEKAAKLAGKEAAIFVPSG-TMGNLIAIMTHCDRRDSEIIVGDC 149
DD++ KE QE A++L G + F+ +G T+GNL I++ C+ D+ ++ +C
Sbjct: 54 DDLHHPSGVIKEAQELASQLYGSAESFFLVNGTTVGNLAMILSVCEPGDTILVQRNC 110
>sp|Q8TUZ5|ARGD_METKA Acetylornithine aminotransferase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=argD PE=3
SV=1
Length = 389
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAEVCA-------S 256
T+ V VE G + P +LREL+ C EH + + +D + +
Sbjct: 176 DTAAVIVEPVQGEAGVRIPPEGFLRELRELCDEHGLLLIVDEVQSGMGRTGQFFAFEHED 235
Query: 257 VDTVMFCLSKGLGA--PVGSILA 277
V + CL+KGLG PVG+ +A
Sbjct: 236 VLPDIVCLAKGLGGGVPVGATIA 258
>sp|A1VC86|TNAA_DESVV Tryptophanase OS=Desulfovibrio vulgaris subsp. vulgaris (strain
DP4) GN=tnaA PE=3 SV=1
Length = 462
Score = 35.4 bits (80), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 156 EQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFST--ADNIHCASTSLVCVENT 213
E GA +V ++ + G G FDL+++EA A N+ ++ C
Sbjct: 135 EMTGAKAINVVTE--KAFDTGTYYDWKGDFDLEKLEATIRQHGAQNVAGIIVTITC---- 188
Query: 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248
N GG + M +RE A + H I V +D AR
Sbjct: 189 -NSAGGQPVSMANIREAAAIAKRHGITVIIDSARF 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,922,778
Number of Sequences: 539616
Number of extensions: 4487772
Number of successful extensions: 11006
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 10958
Number of HSP's gapped (non-prelim): 87
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)