Query psy5413
Match_columns 285
No_of_seqs 200 out of 1863
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 16:50:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5413.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5413hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jg8_A L-ALLO-threonine aldola 100.0 1.1E-27 3.7E-32 212.0 16.3 210 66-284 3-221 (347)
2 1v72_A Aldolase; PLP-dependent 99.9 1.6E-25 5.3E-30 198.4 18.0 208 66-284 7-230 (356)
3 4ao9_A Beta-phenylalanine amin 99.9 1.1E-25 3.7E-30 205.6 16.7 224 27-284 70-306 (454)
4 3pj0_A LMO0305 protein; struct 99.9 2.4E-26 8.2E-31 204.3 9.7 196 72-284 20-226 (359)
5 3lws_A Aromatic amino acid bet 99.9 5.6E-26 1.9E-30 201.9 9.3 174 94-284 40-224 (357)
6 3ly1_A Putative histidinol-pho 99.9 2.4E-24 8.1E-29 191.0 15.1 203 64-284 14-233 (354)
7 3kki_A CAI-1 autoinducer synth 99.9 3.5E-24 1.2E-28 194.0 16.4 195 64-284 57-273 (409)
8 2w8t_A SPT, serine palmitoyltr 99.9 9.2E-24 3.1E-28 192.5 18.6 198 64-284 62-281 (427)
9 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 5.1E-24 1.7E-28 189.8 15.8 202 67-284 8-228 (371)
10 1t3i_A Probable cysteine desul 99.9 7.1E-24 2.4E-28 191.8 16.3 202 65-284 26-249 (420)
11 1o4s_A Aspartate aminotransfer 99.9 9E-24 3.1E-28 190.1 16.9 202 65-284 40-266 (389)
12 1ax4_A Tryptophanase; tryptoph 99.9 2.7E-24 9.2E-29 197.9 13.7 204 65-283 42-285 (467)
13 3tqx_A 2-amino-3-ketobutyrate 99.9 5.8E-24 2E-28 191.2 15.4 200 65-284 42-263 (399)
14 1v2d_A Glutamine aminotransfer 99.9 7.8E-24 2.7E-28 189.7 15.9 200 67-284 26-242 (381)
15 3ele_A Amino transferase; RER0 99.9 1.2E-23 4.2E-28 189.4 16.6 200 66-283 35-267 (398)
16 2z9v_A Aspartate aminotransfer 99.9 5.7E-24 1.9E-28 191.0 14.0 198 69-283 10-214 (392)
17 1j32_A Aspartate aminotransfer 99.9 1.5E-23 5E-28 188.3 16.6 202 65-284 29-257 (388)
18 1gd9_A Aspartate aminotransfer 99.9 1.6E-23 5.6E-28 188.0 16.8 200 67-284 27-253 (389)
19 1fc4_A 2-amino-3-ketobutyrate 99.9 2.1E-23 7.2E-28 188.1 16.6 200 65-284 44-265 (401)
20 3nra_A Aspartate aminotransfer 99.9 8.6E-24 2.9E-28 190.8 14.1 200 67-284 40-273 (407)
21 1bs0_A Protein (8-amino-7-oxon 99.9 3.6E-23 1.2E-27 185.5 17.9 196 65-284 38-253 (384)
22 3euc_A Histidinol-phosphate am 99.9 1.4E-23 4.6E-28 187.1 15.0 200 66-284 30-246 (367)
23 3lvm_A Cysteine desulfurase; s 99.9 4.8E-23 1.6E-27 186.9 18.9 202 65-283 20-242 (423)
24 2dou_A Probable N-succinyldiam 99.9 1.2E-23 4E-28 188.3 14.4 202 65-284 24-250 (376)
25 1u08_A Hypothetical aminotrans 99.9 3.2E-23 1.1E-27 186.1 17.0 200 67-284 31-256 (386)
26 3tfu_A Adenosylmethionine-8-am 99.9 4.4E-24 1.5E-28 196.5 11.0 213 65-283 72-322 (457)
27 3a2b_A Serine palmitoyltransfe 99.9 4.8E-23 1.6E-27 185.6 17.5 197 65-284 42-260 (398)
28 2dr1_A PH1308 protein, 386AA l 99.9 3.2E-23 1.1E-27 185.5 15.8 192 71-283 23-226 (386)
29 3fdb_A Beta C-S lyase, putativ 99.9 1.9E-23 6.3E-28 186.7 14.2 198 65-284 22-244 (377)
30 3ffh_A Histidinol-phosphate am 99.9 2.3E-23 8E-28 185.3 14.8 199 66-284 32-245 (363)
31 2x5d_A Probable aminotransfera 99.9 2.9E-23 1E-27 188.0 15.6 203 64-284 35-265 (412)
32 1kmj_A Selenocysteine lyase; p 99.9 1.6E-23 5.5E-28 188.5 13.8 202 65-284 21-244 (406)
33 1svv_A Threonine aldolase; str 99.9 1.4E-22 4.9E-27 179.4 19.6 207 66-284 13-234 (359)
34 3b46_A Aminotransferase BNA3; 99.9 1.9E-23 6.6E-28 191.5 14.4 202 65-284 56-295 (447)
35 3jtx_A Aminotransferase; NP_28 99.9 2.2E-23 7.4E-28 187.6 14.5 202 65-284 29-265 (396)
36 1yiz_A Kynurenine aminotransfe 99.9 3E-23 1E-27 188.9 15.4 200 67-284 38-275 (429)
37 1b5p_A Protein (aspartate amin 99.9 5.2E-23 1.8E-27 184.9 16.5 202 65-284 30-254 (385)
38 3k28_A Glutamate-1-semialdehyd 99.9 5.3E-23 1.8E-27 187.5 16.6 211 65-284 52-287 (429)
39 3jzl_A Putative cystathionine 99.9 4.6E-23 1.6E-27 186.7 15.8 187 80-284 31-248 (409)
40 3zrp_A Serine-pyruvate aminotr 99.9 3E-23 1E-27 185.4 14.3 189 76-283 10-207 (384)
41 3ezs_A Aminotransferase ASPB; 99.9 6.5E-24 2.2E-28 189.7 9.9 199 67-284 24-251 (376)
42 2o0r_A RV0858C (N-succinyldiam 99.9 3.5E-23 1.2E-27 187.5 14.5 200 67-284 26-253 (411)
43 3dyd_A Tyrosine aminotransfera 99.9 3.6E-23 1.2E-27 188.6 14.6 198 64-279 52-278 (427)
44 3get_A Histidinol-phosphate am 99.9 2.6E-23 8.9E-28 185.2 13.1 198 66-284 30-247 (365)
45 3i16_A Aluminum resistance pro 99.9 8.9E-23 3.1E-27 185.6 16.7 195 80-284 45-265 (427)
46 2oqx_A Tryptophanase; lyase, p 99.9 1.6E-23 5.4E-28 192.8 11.8 206 65-281 40-281 (467)
47 3kax_A Aminotransferase, class 99.9 8.5E-23 2.9E-27 182.6 15.9 201 65-283 23-250 (383)
48 1xi9_A Putative transaminase; 99.9 5.9E-23 2E-27 185.7 15.0 198 65-280 37-263 (406)
49 3dzz_A Putative pyridoxal 5'-p 99.9 1E-22 3.5E-27 182.6 16.2 203 65-284 26-255 (391)
50 3l44_A Glutamate-1-semialdehyd 99.9 8.1E-23 2.8E-27 186.4 15.7 210 65-284 54-289 (434)
51 2o1b_A Aminotransferase, class 99.9 2.8E-23 9.6E-28 187.9 12.6 202 65-284 46-273 (404)
52 1elu_A L-cysteine/L-cystine C- 99.9 3E-23 1E-27 185.9 12.5 199 68-284 17-239 (390)
53 3fvs_A Kynurenine--oxoglutarat 99.9 3.1E-23 1.1E-27 188.2 12.6 201 66-284 28-267 (422)
54 1iug_A Putative aspartate amin 99.9 2.9E-23 9.9E-28 183.5 11.9 188 74-283 7-203 (352)
55 2gb3_A Aspartate aminotransfer 99.9 3.2E-23 1.1E-27 187.7 12.4 200 65-284 42-265 (409)
56 3ndn_A O-succinylhomoserine su 99.9 2.4E-22 8E-27 182.6 17.8 163 99-284 79-248 (414)
57 3g0t_A Putative aminotransfera 99.9 3.2E-23 1.1E-27 188.9 12.1 203 65-284 43-280 (437)
58 3hvy_A Cystathionine beta-lyas 99.9 1.5E-22 5.1E-27 184.1 16.4 189 79-284 45-265 (427)
59 1eg5_A Aminotransferase; PLP-d 99.9 1.3E-22 4.4E-27 181.3 15.5 196 70-282 4-219 (384)
60 1m32_A 2-aminoethylphosphonate 99.9 7.9E-23 2.7E-27 181.4 13.8 196 68-284 5-212 (366)
61 3e2y_A Kynurenine-oxoglutarate 99.9 3.9E-23 1.3E-27 186.7 11.9 201 66-284 23-260 (410)
62 3h14_A Aminotransferase, class 99.9 1.5E-22 5.2E-27 181.9 15.4 200 64-284 29-250 (391)
63 1vjo_A Alanine--glyoxylate ami 99.9 5.4E-23 1.8E-27 184.8 12.4 191 71-283 37-239 (393)
64 2pb2_A Acetylornithine/succiny 99.9 3.8E-22 1.3E-26 181.5 18.1 205 65-284 56-289 (420)
65 4e3q_A Pyruvate transaminase; 99.9 4.7E-23 1.6E-27 189.5 12.1 232 26-279 49-321 (473)
66 2huf_A Alanine glyoxylate amin 99.9 6.6E-23 2.2E-27 184.1 12.8 190 76-283 27-224 (393)
67 3nnk_A Ureidoglycine-glyoxylat 99.9 6.5E-23 2.2E-27 185.1 12.7 194 70-283 15-218 (411)
68 3l8a_A METC, putative aminotra 99.9 1.2E-22 4.2E-27 184.6 14.6 202 65-283 60-288 (421)
69 3i5t_A Aminotransferase; pyrid 99.9 1.4E-22 4.9E-27 187.2 15.2 217 65-284 53-311 (476)
70 3fq8_A Glutamate-1-semialdehyd 99.9 2.9E-22 9.8E-27 182.4 16.9 211 65-284 51-286 (427)
71 4atq_A 4-aminobutyrate transam 99.9 1.3E-22 4.6E-27 185.8 14.6 215 65-279 63-310 (456)
72 3cai_A Possible aminotransfera 99.9 2.1E-22 7.2E-27 181.7 15.7 198 69-284 28-245 (406)
73 3nx3_A Acoat, acetylornithine 99.9 4.5E-22 1.5E-26 179.2 17.7 206 65-282 35-265 (395)
74 2zc0_A Alanine glyoxylate tran 99.9 1.4E-22 4.7E-27 183.1 14.4 206 65-284 33-266 (407)
75 3dod_A Adenosylmethionine-8-am 99.9 1.7E-22 6E-27 185.2 15.2 232 27-284 27-300 (448)
76 2z61_A Probable aspartate amin 99.9 2.7E-22 9.4E-27 179.0 15.9 192 65-284 28-242 (370)
77 3ht4_A Aluminum resistance pro 99.9 4.7E-22 1.6E-26 181.4 17.5 197 79-284 36-254 (431)
78 3f0h_A Aminotransferase; RER07 99.9 1.8E-22 6E-27 180.3 14.4 188 76-283 27-224 (376)
79 2oat_A Ornithine aminotransfer 99.9 4.2E-22 1.4E-26 182.3 17.1 207 64-284 74-312 (439)
80 4e77_A Glutamate-1-semialdehyd 99.9 5.1E-22 1.8E-26 180.9 17.6 211 65-284 52-287 (429)
81 3aow_A Putative uncharacterize 99.9 1.3E-22 4.6E-27 186.1 13.8 207 65-284 75-308 (448)
82 3dxv_A Alpha-amino-epsilon-cap 99.9 3.3E-22 1.1E-26 182.7 16.2 217 65-284 42-289 (439)
83 3kgw_A Alanine-glyoxylate amin 99.9 8.2E-23 2.8E-27 183.1 11.9 191 75-283 30-228 (393)
84 1z7d_A Ornithine aminotransfer 99.9 3.8E-22 1.3E-26 182.3 16.5 205 65-284 64-301 (433)
85 3ri6_A O-acetylhomoserine sulf 99.9 3E-22 1E-26 182.7 15.3 156 99-277 80-242 (430)
86 3ftb_A Histidinol-phosphate am 99.9 3E-22 1E-26 177.8 14.8 196 65-284 25-236 (361)
87 2ez2_A Beta-tyrosinase, tyrosi 99.9 3.5E-22 1.2E-26 183.2 15.7 200 65-283 41-275 (456)
88 2fq6_A Cystathionine beta-lyas 99.9 4.8E-22 1.6E-26 180.6 16.1 189 73-284 51-251 (415)
89 3ruy_A Ornithine aminotransfer 99.9 3.2E-22 1.1E-26 179.9 14.8 205 65-284 35-271 (392)
90 3gju_A Putative aminotransfera 99.9 1.9E-22 6.4E-27 185.6 13.2 216 65-283 50-309 (460)
91 1iay_A ACC synthase 2, 1-amino 99.9 4.3E-22 1.5E-26 181.2 15.1 207 67-284 37-289 (428)
92 2yrr_A Aminotransferase, class 99.9 1.5E-22 5E-27 178.8 11.6 188 76-283 8-204 (353)
93 4hvk_A Probable cysteine desul 99.9 3.1E-22 1.1E-26 178.4 13.8 191 71-279 4-213 (382)
94 3acz_A Methionine gamma-lyase; 99.9 1.2E-21 4E-26 176.6 17.4 185 77-284 33-227 (389)
95 2zyj_A Alpha-aminodipate amino 99.9 1.4E-22 4.8E-27 182.6 11.4 201 66-284 32-257 (397)
96 1vp4_A Aminotransferase, putat 99.9 3.5E-22 1.2E-26 181.8 14.0 207 66-284 43-279 (425)
97 3hmu_A Aminotransferase, class 99.9 2.2E-22 7.4E-27 185.9 12.7 231 26-283 37-311 (472)
98 3f9t_A TDC, L-tyrosine decarbo 99.9 7.2E-22 2.5E-26 176.9 15.7 187 77-283 40-265 (397)
99 3op7_A Aminotransferase class 99.9 2.8E-22 9.6E-27 179.1 13.0 183 81-284 46-242 (375)
100 2cb1_A O-acetyl homoserine sul 99.9 2.3E-21 7.9E-26 175.9 18.9 184 73-281 27-220 (412)
101 3vax_A Putative uncharacterize 99.9 3.3E-22 1.1E-26 179.9 13.0 196 67-279 20-235 (400)
102 3piu_A 1-aminocyclopropane-1-c 99.9 5.3E-22 1.8E-26 181.1 14.3 206 67-283 39-293 (435)
103 2bwn_A 5-aminolevulinate synth 99.9 1.1E-21 3.7E-26 177.0 16.1 197 65-283 45-264 (401)
104 1c7n_A Cystalysin; transferase 99.9 6.3E-22 2.1E-26 178.3 14.5 199 67-284 32-259 (399)
105 4a6r_A Omega transaminase; tra 99.9 7.6E-22 2.6E-26 181.5 15.3 216 65-284 49-308 (459)
106 3p1t_A Putative histidinol-pho 99.9 1.3E-21 4.5E-26 172.1 16.1 192 66-284 16-218 (337)
107 1bw0_A TAT, protein (tyrosine 99.9 7.1E-22 2.4E-26 179.0 14.8 197 66-280 33-269 (416)
108 4eb5_A Probable cysteine desul 99.9 7.9E-22 2.7E-26 176.1 14.7 189 75-281 8-214 (382)
109 3isl_A Purine catabolism prote 99.9 5E-22 1.7E-26 179.5 13.1 190 76-283 19-216 (416)
110 3k40_A Aromatic-L-amino-acid d 99.9 3.5E-21 1.2E-25 177.9 18.9 211 46-283 64-321 (475)
111 2ord_A Acoat, acetylornithine 99.9 2.5E-21 8.6E-26 174.4 17.5 202 65-282 39-269 (397)
112 4dq6_A Putative pyridoxal phos 99.9 1.7E-21 5.7E-26 174.7 16.1 199 66-283 32-258 (391)
113 4e1o_A HDC, histidine decarbox 99.9 4.4E-21 1.5E-25 177.5 19.3 211 46-282 69-327 (481)
114 2epj_A Glutamate-1-semialdehyd 99.9 2.7E-21 9.2E-26 176.4 17.6 208 65-284 55-290 (434)
115 2rfv_A Methionine gamma-lyase; 99.9 2.5E-21 8.6E-26 174.7 17.3 183 79-284 38-231 (398)
116 1d2f_A MALY protein; aminotran 99.9 1.2E-21 4.2E-26 175.9 14.9 197 67-283 29-253 (390)
117 1qgn_A Protein (cystathionine 99.9 3.7E-21 1.2E-25 176.1 17.9 163 99-284 112-282 (445)
118 3rq1_A Aminotransferase class 99.9 1.3E-21 4.5E-26 177.4 14.9 207 65-284 37-285 (418)
119 3t18_A Aminotransferase class 99.9 1.1E-21 3.6E-26 177.8 14.1 206 65-284 36-284 (413)
120 1lc5_A COBD, L-threonine-O-3-p 99.9 1.3E-21 4.4E-26 174.3 14.4 199 65-284 23-237 (364)
121 2bkw_A Alanine-glyoxylate amin 99.9 1.1E-21 3.9E-26 175.3 13.9 196 69-283 7-219 (385)
122 4adb_A Succinylornithine trans 99.9 2.3E-21 7.8E-26 174.9 15.7 205 65-284 38-271 (406)
123 2ch1_A 3-hydroxykynurenine tra 99.9 8.9E-22 3.1E-26 176.9 12.5 192 72-283 22-223 (396)
124 3qhx_A Cystathionine gamma-syn 99.9 3.4E-21 1.2E-25 173.8 16.2 162 99-283 64-233 (392)
125 3n5m_A Adenosylmethionine-8-am 99.9 2.7E-21 9.3E-26 177.4 15.2 216 65-284 48-304 (452)
126 1gc0_A Methionine gamma-lyase; 99.9 4.1E-21 1.4E-25 173.5 16.0 162 99-283 63-231 (398)
127 3uwc_A Nucleotide-sugar aminot 99.9 8.2E-22 2.8E-26 175.9 11.3 187 67-280 7-202 (374)
128 1e5e_A MGL, methionine gamma-l 99.9 7E-21 2.4E-25 172.4 17.4 163 99-284 60-230 (404)
129 2eo5_A 419AA long hypothetical 99.9 8E-21 2.7E-25 172.6 17.8 215 65-283 41-300 (419)
130 3oks_A 4-aminobutyrate transam 99.9 2.8E-21 9.4E-26 177.4 14.8 218 64-284 59-315 (451)
131 4ffc_A 4-aminobutyrate aminotr 99.9 2.1E-21 7.3E-26 178.3 13.9 214 64-284 62-313 (453)
132 1b9h_A AHBA synthase, protein 99.9 7.6E-21 2.6E-25 170.6 16.2 178 80-281 16-203 (388)
133 3qgu_A LL-diaminopimelate amin 99.9 4E-21 1.4E-25 175.9 14.6 196 65-284 68-302 (449)
134 2ay1_A Aroat, aromatic amino a 99.9 3E-21 1E-25 173.5 13.5 199 66-278 26-257 (394)
135 3a9z_A Selenocysteine lyase; P 99.9 7.8E-21 2.7E-25 173.0 16.3 203 68-282 19-262 (432)
136 3f6t_A Aspartate aminotransfer 99.9 1.7E-21 5.9E-26 182.4 12.3 197 67-281 104-330 (533)
137 2oga_A Transaminase; PLP-depen 99.9 1.3E-21 4.4E-26 176.7 10.8 192 66-283 30-232 (399)
138 3hdo_A Histidinol-phosphate am 99.9 3.2E-21 1.1E-25 171.5 13.0 195 64-284 24-234 (360)
139 2q7w_A Aspartate aminotransfer 99.9 5.8E-21 2E-25 171.7 14.8 199 66-278 26-260 (396)
140 2x5f_A Aspartate_tyrosine_phen 99.9 1.5E-21 5E-26 177.8 10.8 204 66-284 47-294 (430)
141 1mdo_A ARNB aminotransferase; 99.9 3.6E-21 1.2E-25 172.8 13.0 188 68-283 10-206 (393)
142 2ctz_A O-acetyl-L-homoserine s 99.9 2.2E-20 7.4E-25 170.0 18.1 157 99-278 56-221 (421)
143 1fg7_A Histidinol phosphate am 99.9 4.9E-21 1.7E-25 170.3 13.5 191 67-284 30-234 (356)
144 3frk_A QDTB; aminotransferase, 99.9 2.5E-21 8.6E-26 173.0 11.6 177 80-280 16-201 (373)
145 3cq5_A Histidinol-phosphate am 99.9 1.3E-20 4.5E-25 168.1 16.3 195 69-284 33-251 (369)
146 2e7u_A Glutamate-1-semialdehyd 99.9 2.3E-20 8E-25 169.7 18.2 206 65-284 51-285 (424)
147 1ajs_A Aspartate aminotransfer 99.9 7.7E-21 2.6E-25 171.9 14.9 203 65-281 29-278 (412)
148 3i4j_A Aminotransferase, class 99.8 2.9E-21 1E-25 175.9 12.0 217 65-284 28-281 (430)
149 2po3_A 4-dehydrase; external a 99.8 1.1E-20 3.7E-25 171.9 15.6 188 70-283 20-218 (424)
150 4f4e_A Aromatic-amino-acid ami 99.8 4.1E-21 1.4E-25 174.5 12.6 196 66-276 49-281 (420)
151 3n0l_A Serine hydroxymethyltra 99.8 1.9E-20 6.6E-25 169.3 17.0 188 79-283 37-245 (417)
152 2cy8_A D-phgat, D-phenylglycin 99.8 1.8E-20 6E-25 172.0 16.7 207 65-284 56-288 (453)
153 3h7f_A Serine hydroxymethyltra 99.8 2.2E-20 7.6E-25 171.2 17.3 189 78-284 56-266 (447)
154 3nmy_A Xometc, cystathionine g 99.8 7.6E-21 2.6E-25 171.9 14.0 161 99-283 65-235 (400)
155 2cjg_A L-lysine-epsilon aminot 99.8 2E-20 7E-25 171.6 16.8 211 65-284 53-315 (449)
156 2yky_A Beta-transaminase; tran 99.8 6.1E-23 2.1E-27 188.5 0.0 205 64-284 98-319 (465)
157 1s0a_A Adenosylmethionine-8-am 99.8 2.3E-20 7.7E-25 170.0 16.9 213 65-284 42-294 (429)
158 3nyt_A Aminotransferase WBPE; 99.8 3.9E-21 1.3E-25 171.5 11.6 179 80-282 15-203 (367)
159 3if2_A Aminotransferase; YP_26 99.8 1.1E-20 3.7E-25 172.7 14.7 207 66-284 31-295 (444)
160 2aeu_A Hypothetical protein MJ 99.8 7.6E-21 2.6E-25 170.4 13.2 187 65-284 26-226 (374)
161 3fsl_A Aromatic-amino-acid ami 99.8 1.1E-20 3.8E-25 169.9 14.1 197 66-277 26-260 (397)
162 1wyu_B Glycine dehydrogenase s 99.8 1.4E-20 4.8E-25 173.8 15.0 195 68-284 68-290 (474)
163 2qma_A Diaminobutyrate-pyruvat 99.8 2.3E-20 7.9E-25 173.3 16.5 195 77-283 110-344 (497)
164 1vef_A Acetylornithine/acetyl- 99.8 2.3E-20 8E-25 167.8 16.0 205 65-284 44-273 (395)
165 3a8u_X Omega-amino acid--pyruv 99.8 1.5E-20 5.1E-25 172.2 14.8 213 65-283 49-307 (449)
166 2eh6_A Acoat, acetylornithine 99.8 2.4E-20 8.3E-25 166.4 15.6 204 65-284 27-260 (375)
167 4a0g_A Adenosylmethionine-8-am 99.8 5.3E-21 1.8E-25 186.6 11.9 236 26-279 356-680 (831)
168 2fnu_A Aminotransferase; prote 99.8 1.7E-20 5.9E-25 167.1 14.3 182 77-283 9-201 (375)
169 3vp6_A Glutamate decarboxylase 99.8 4.1E-20 1.4E-24 172.2 17.1 189 80-282 108-334 (511)
170 3mad_A Sphingosine-1-phosphate 99.8 3.2E-20 1.1E-24 173.0 16.3 157 104-281 142-329 (514)
171 3cog_A Cystathionine gamma-lya 99.8 1.6E-20 5.5E-25 170.0 13.7 161 99-283 65-234 (403)
172 3dr4_A Putative perosamine syn 99.8 1.2E-20 4.1E-25 169.6 12.6 177 80-280 35-220 (391)
173 1qz9_A Kynureninase; kynurenin 99.8 2.6E-20 8.7E-25 168.5 14.6 192 69-284 30-247 (416)
174 3gbx_A Serine hydroxymethyltra 99.8 3.9E-20 1.3E-24 167.3 15.4 193 69-280 34-246 (420)
175 3tcm_A Alanine aminotransferas 99.8 1.3E-20 4.6E-25 175.1 12.6 194 80-284 108-341 (500)
176 1rv3_A Serine hydroxymethyltra 99.8 1E-19 3.5E-24 168.4 18.4 200 68-282 46-272 (483)
177 1cs1_A CGS, protein (cystathio 99.8 4E-20 1.4E-24 166.1 15.2 162 99-283 50-219 (386)
178 2dkj_A Serine hydroxymethyltra 99.8 5.2E-20 1.8E-24 165.9 15.6 199 66-284 23-245 (407)
179 7aat_A Aspartate aminotransfer 99.8 6.1E-20 2.1E-24 165.4 15.6 197 67-277 29-263 (401)
180 1sff_A 4-aminobutyrate aminotr 99.8 4.9E-20 1.7E-24 167.3 15.0 216 65-284 40-287 (426)
181 2vi8_A Serine hydroxymethyltra 99.8 7.6E-20 2.6E-24 164.7 16.1 197 67-284 25-244 (405)
182 2jis_A Cysteine sulfinic acid 99.8 6.6E-20 2.3E-24 171.0 16.0 173 96-280 139-343 (515)
183 2a7v_A Serine hydroxymethyltra 99.8 4.1E-20 1.4E-24 170.7 14.2 195 72-282 61-282 (490)
184 3ecd_A Serine hydroxymethyltra 99.8 1.8E-19 6.1E-24 163.2 18.2 183 79-280 44-249 (425)
185 1o69_A Aminotransferase; struc 99.8 4.6E-20 1.6E-24 166.3 13.3 182 80-284 11-203 (394)
186 1pff_A Methionine gamma-lyase; 99.8 2.6E-20 8.9E-25 163.6 11.2 156 105-283 2-166 (331)
187 1yaa_A Aspartate aminotransfer 99.8 1.2E-19 4E-24 164.3 15.7 198 65-277 28-267 (412)
188 2okj_A Glutamate decarboxylase 99.8 1.4E-19 4.9E-24 168.3 16.7 176 96-283 123-332 (504)
189 1n8p_A Cystathionine gamma-lya 99.8 5.6E-20 1.9E-24 165.9 13.5 161 99-284 53-225 (393)
190 1js3_A DDC;, DOPA decarboxylas 99.8 1.7E-19 5.8E-24 167.0 17.1 186 82-281 89-320 (486)
191 1zod_A DGD, 2,2-dialkylglycine 99.8 6.4E-20 2.2E-24 167.1 13.8 215 65-284 42-291 (433)
192 2zy4_A L-aspartate beta-decarb 99.8 1.1E-20 3.7E-25 177.3 8.8 198 68-281 106-332 (546)
193 3ez1_A Aminotransferase MOCR f 99.8 1.6E-20 5.4E-25 170.6 9.4 202 67-284 26-272 (423)
194 1ibj_A CBL, cystathionine beta 99.8 1.6E-19 5.5E-24 166.1 16.1 193 67-283 90-299 (464)
195 3ei9_A LL-diaminopimelate amin 99.8 8E-20 2.7E-24 166.4 14.0 203 65-282 55-288 (432)
196 3fkd_A L-threonine-O-3-phospha 99.8 4E-20 1.4E-24 163.7 11.6 189 65-284 14-217 (350)
197 3e9k_A Kynureninase; kynurenin 99.8 8.4E-20 2.9E-24 168.0 14.0 204 66-284 66-296 (465)
198 2c81_A Glutamine-2-deoxy-scyll 99.8 9.2E-20 3.2E-24 165.4 14.0 181 79-283 14-210 (418)
199 3g7q_A Valine-pyruvate aminotr 99.8 3.8E-20 1.3E-24 167.4 11.2 204 66-284 31-269 (417)
200 3asa_A LL-diaminopimelate amin 99.8 8.3E-20 2.8E-24 164.8 12.9 194 65-282 32-254 (400)
201 3meb_A Aspartate aminotransfer 99.8 2.7E-19 9.3E-24 164.0 16.4 199 67-276 50-289 (448)
202 3b1d_A Betac-S lyase; HET: PLP 99.7 9.4E-22 3.2E-26 177.0 0.0 199 67-284 32-259 (392)
203 4eu1_A Mitochondrial aspartate 99.8 1.6E-19 5.6E-24 163.2 14.5 202 66-281 41-278 (409)
204 3hbx_A GAD 1, glutamate decarb 99.8 5.1E-19 1.7E-23 164.5 18.0 194 70-283 59-296 (502)
205 3ppl_A Aspartate aminotransfer 99.8 2.9E-20 1E-24 169.1 9.3 201 67-284 34-279 (427)
206 3ju7_A Putative PLP-dependent 99.8 1.6E-19 5.4E-24 162.0 13.6 179 79-282 14-208 (377)
207 1ohv_A 4-aminobutyrate aminotr 99.8 1.5E-19 5.1E-24 166.8 13.8 214 64-282 61-342 (472)
208 3mc6_A Sphingosine-1-phosphate 99.8 7.8E-20 2.7E-24 169.6 12.0 182 79-280 76-295 (497)
209 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.8E-19 6.3E-24 164.5 14.3 179 80-282 42-236 (437)
210 2r2n_A Kynurenine/alpha-aminoa 99.8 1.9E-19 6.3E-24 163.9 13.6 177 96-284 73-282 (425)
211 2dgk_A GAD-beta, GADB, glutama 99.8 9E-19 3.1E-23 160.6 17.2 183 79-282 54-280 (452)
212 3b8x_A WBDK, pyridoxamine 5-ph 99.8 8.7E-19 3E-23 157.5 16.4 180 79-282 13-207 (390)
213 3d6k_A Putative aminotransfera 99.8 9.2E-20 3.1E-24 165.7 9.4 199 68-284 34-277 (422)
214 3ffr_A Phosphoserine aminotran 99.8 1E-19 3.5E-24 161.1 8.9 185 76-283 12-209 (362)
215 1uu1_A Histidinol-phosphate am 99.8 2.2E-19 7.6E-24 158.1 10.6 186 67-284 20-222 (335)
216 3ihj_A Alanine aminotransferas 99.8 5.8E-19 2E-23 164.0 13.3 177 95-284 123-340 (498)
217 3k7y_A Aspartate aminotransfer 99.8 1.1E-18 3.7E-23 158.0 13.6 200 66-282 29-270 (405)
218 3ke3_A Putative serine-pyruvat 99.8 2.6E-18 8.9E-23 154.0 12.6 167 101-283 35-217 (379)
219 2z67_A O-phosphoseryl-tRNA(SEC 99.7 4.4E-18 1.5E-22 156.3 11.8 166 102-283 134-317 (456)
220 2x3l_A ORN/Lys/Arg decarboxyla 99.7 2E-18 6.7E-23 158.2 9.1 162 96-283 52-229 (446)
221 1w23_A Phosphoserine aminotran 99.7 1.2E-18 4.3E-23 154.3 6.1 189 68-284 4-214 (360)
222 1c4k_A Protein (ornithine deca 99.7 1.4E-17 4.9E-22 160.2 11.4 168 96-278 168-368 (730)
223 2vyc_A Biodegradative arginine 99.7 2.1E-16 7.2E-21 153.1 14.9 168 99-281 203-402 (755)
224 2c0r_A PSAT, phosphoserine ami 99.7 4.1E-17 1.4E-21 144.9 9.2 181 76-284 12-215 (362)
225 4h51_A Aspartate aminotransfer 99.7 3.3E-16 1.1E-20 142.1 13.1 199 68-280 46-281 (420)
226 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 3.1E-16 1.1E-20 142.1 11.0 163 104-282 101-284 (450)
227 3n75_A LDC, lysine decarboxyla 99.7 4E-16 1.4E-20 149.3 12.2 167 96-281 190-383 (715)
228 1wyu_A Glycine dehydrogenase ( 99.6 4.7E-16 1.6E-20 142.0 10.6 161 101-284 108-280 (438)
229 2fyf_A PSAT, phosphoserine ami 99.6 2.8E-16 9.6E-21 141.5 7.7 188 66-283 39-240 (398)
230 3ou5_A Serine hydroxymethyltra 99.6 4.6E-15 1.6E-19 132.9 14.5 189 71-281 60-281 (490)
231 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 8.1E-16 2.8E-20 138.3 9.6 155 114-284 129-304 (501)
232 3bwn_A AT1G70560, L-tryptophan 99.6 3.3E-16 1.1E-20 141.0 6.9 188 65-284 21-238 (391)
233 3e77_A Phosphoserine aminotran 99.6 1.3E-15 4.3E-20 136.2 7.5 188 74-284 19-225 (377)
234 3qm2_A Phosphoserine aminotran 99.5 2.2E-15 7.6E-20 135.2 5.2 190 70-284 29-240 (386)
235 2hox_A ALLIIN lyase 1; cystein 99.5 1.8E-15 6.2E-20 137.8 3.7 185 66-284 56-272 (427)
236 3m5u_A Phosphoserine aminotran 99.4 1.2E-13 4E-18 122.9 4.9 182 69-283 7-211 (361)
237 3s5o_A 4-hydroxy-2-oxoglutarat 74.7 5.5 0.00019 33.8 6.0 61 178-243 25-88 (307)
238 3l21_A DHDPS, dihydrodipicolin 72.3 5.4 0.00018 33.8 5.3 62 178-244 26-90 (304)
239 3dz1_A Dihydrodipicolinate syn 71.8 5.2 0.00018 34.0 5.2 63 178-246 19-83 (313)
240 3flu_A DHDPS, dihydrodipicolin 70.1 6.5 0.00022 33.2 5.4 61 178-243 18-81 (297)
241 2wkj_A N-acetylneuraminate lya 70.0 6.5 0.00022 33.2 5.4 62 178-244 22-86 (303)
242 1tks_A 3,4-dihydroxy-2-butanon 69.8 5.8 0.0002 31.4 4.6 36 204-243 159-194 (204)
243 3fkr_A L-2-keto-3-deoxyarabona 69.8 4.8 0.00016 34.2 4.5 63 178-245 19-84 (309)
244 1xky_A Dihydrodipicolinate syn 69.7 6.7 0.00023 33.1 5.4 62 178-244 23-87 (301)
245 1vhx_A Putative holliday junct 69.1 10 0.00035 28.4 5.7 59 183-248 40-101 (150)
246 3qze_A DHDPS, dihydrodipicolin 68.7 6.2 0.00021 33.6 4.9 61 178-243 34-97 (314)
247 3cpr_A Dihydrodipicolinate syn 68.5 7 0.00024 33.1 5.2 63 178-245 27-92 (304)
248 3tak_A DHDPS, dihydrodipicolin 68.3 6.8 0.00023 32.9 5.1 61 178-243 12-75 (291)
249 1f6k_A N-acetylneuraminate lya 67.7 7.2 0.00025 32.8 5.1 63 178-244 14-79 (293)
250 2ojp_A DHDPS, dihydrodipicolin 67.5 7.2 0.00024 32.8 5.1 63 178-245 12-77 (292)
251 3b4u_A Dihydrodipicolinate syn 67.2 6.9 0.00024 32.9 4.9 62 178-244 14-78 (294)
252 2q5c_A NTRC family transcripti 66.7 44 0.0015 26.0 10.8 63 103-179 16-78 (196)
253 2r8w_A AGR_C_1641P; APC7498, d 66.5 7.6 0.00026 33.3 5.1 61 178-243 45-108 (332)
254 4dpp_A DHDPS 2, dihydrodipicol 65.2 9.7 0.00033 33.1 5.5 61 178-243 70-133 (360)
255 3na8_A Putative dihydrodipicol 65.0 5.7 0.00019 33.8 4.0 61 178-243 35-98 (315)
256 2hmc_A AGR_L_411P, dihydrodipi 64.3 8.4 0.00029 33.3 5.0 64 178-246 37-100 (344)
257 3a5f_A Dihydrodipicolinate syn 64.2 8.8 0.0003 32.2 5.0 62 178-245 13-77 (291)
258 2v9d_A YAGE; dihydrodipicolini 64.1 7.7 0.00026 33.5 4.7 61 179-244 43-106 (343)
259 3si9_A DHDPS, dihydrodipicolin 63.7 6.7 0.00023 33.4 4.2 61 178-243 33-96 (315)
260 4gqr_A Pancreatic alpha-amylas 63.0 5.2 0.00018 35.8 3.6 24 223-246 75-98 (496)
261 3h5d_A DHDPS, dihydrodipicolin 61.4 6.7 0.00023 33.3 3.8 62 178-244 18-82 (311)
262 3e96_A Dihydrodipicolinate syn 60.9 7.2 0.00025 33.2 3.9 62 178-244 22-87 (316)
263 3v7e_A Ribosome-associated pro 59.8 24 0.00081 23.3 5.6 47 187-247 16-62 (82)
264 2pcq_A Putative dihydrodipicol 59.6 3.1 0.0001 34.9 1.3 60 178-244 9-68 (283)
265 3m5v_A DHDPS, dihydrodipicolin 59.3 6.9 0.00024 33.1 3.5 59 181-244 21-83 (301)
266 3qfe_A Putative dihydrodipicol 58.4 8.6 0.0003 32.8 3.9 58 181-243 25-85 (318)
267 3bzy_B ESCU; auto cleavage pro 57.8 7.1 0.00024 26.1 2.6 20 227-246 29-48 (83)
268 3d0c_A Dihydrodipicolinate syn 56.1 8.5 0.00029 32.7 3.5 60 180-244 25-87 (314)
269 1w3i_A EDA, 2-keto-3-deoxy glu 56.0 12 0.00042 31.3 4.5 55 178-237 10-64 (293)
270 2ehh_A DHDPS, dihydrodipicolin 55.1 12 0.0004 31.5 4.2 59 182-245 15-76 (294)
271 2pju_A Propionate catabolism o 54.8 80 0.0027 25.2 11.4 93 101-212 22-116 (225)
272 2yxg_A DHDPS, dihydrodipicolin 53.8 11 0.00038 31.5 3.9 58 182-244 15-75 (289)
273 2nuw_A 2-keto-3-deoxygluconate 53.6 11 0.00039 31.5 3.8 55 178-237 10-64 (288)
274 1snn_A DHBP synthase, 3,4-dihy 53.1 18 0.0006 29.2 4.6 35 204-243 178-212 (227)
275 1o5k_A DHDPS, dihydrodipicolin 52.7 11 0.00039 31.8 3.7 58 182-244 27-87 (306)
276 1g94_A Alpha-amylase; beta-alp 52.6 9.4 0.00032 34.0 3.4 23 224-246 64-86 (448)
277 3eb2_A Putative dihydrodipicol 52.5 6 0.00021 33.4 1.9 61 178-243 15-78 (300)
278 1ud2_A Amylase, alpha-amylase; 52.1 10 0.00035 34.1 3.6 24 224-247 80-103 (480)
279 1hvx_A Alpha-amylase; hydrolas 52.0 10 0.00035 34.5 3.6 24 224-247 81-104 (515)
280 3bh4_A Alpha-amylase; calcium, 51.8 11 0.00036 34.0 3.6 23 224-246 78-100 (483)
281 3mio_A DHBP synthase, 3,4-dihy 51.6 20 0.00067 28.4 4.6 36 204-243 158-194 (206)
282 1mxg_A Alpha amylase; hyperthe 51.3 11 0.00038 33.5 3.6 25 223-247 85-109 (435)
283 3j21_Z 50S ribosomal protein L 51.2 34 0.0012 23.3 5.5 44 187-244 20-63 (99)
284 1wpc_A Glucan 1,4-alpha-maltoh 50.9 11 0.00038 33.9 3.6 24 223-246 81-104 (485)
285 1lwj_A 4-alpha-glucanotransfer 50.4 12 0.0004 33.3 3.6 23 224-246 69-91 (441)
286 2vt1_B Surface presentation of 50.3 11 0.00038 25.8 2.6 20 227-246 29-48 (93)
287 2ioj_A Hypothetical protein AF 50.2 35 0.0012 24.8 5.7 42 188-246 64-106 (139)
288 3t7y_A YOP proteins translocat 50.0 9.7 0.00033 26.3 2.3 20 227-246 44-63 (97)
289 1ht6_A AMY1, alpha-amylase iso 49.9 12 0.00041 32.8 3.6 24 224-247 68-91 (405)
290 2guy_A Alpha-amylase A; (beta- 49.1 12 0.00042 33.5 3.6 23 224-246 97-119 (478)
291 3c01_E Surface presentation of 48.0 11 0.00037 26.1 2.3 20 227-246 29-48 (98)
292 1g57_A DHBP synthase, 3,4-dihy 47.8 26 0.0009 28.0 4.9 35 204-243 167-201 (217)
293 1jae_A Alpha-amylase; glycosid 47.4 13 0.00044 33.4 3.5 23 224-246 74-96 (471)
294 4ggi_A UDP-2,3-diacylglucosami 47.3 46 0.0016 27.7 6.6 42 187-242 234-275 (283)
295 3daq_A DHDPS, dihydrodipicolin 46.8 16 0.00054 30.6 3.7 59 180-244 16-77 (292)
296 1wza_A Alpha-amylase A; hydrol 46.7 16 0.00053 33.0 3.9 24 223-246 80-103 (488)
297 3dhu_A Alpha-amylase; structur 46.2 15 0.0005 32.7 3.6 25 223-247 82-106 (449)
298 1gcy_A Glucan 1,4-alpha-maltot 46.0 15 0.0005 33.6 3.6 24 223-246 91-114 (527)
299 2aaa_A Alpha-amylase; glycosid 46.0 14 0.00047 33.3 3.4 23 224-246 97-119 (484)
300 1ua7_A Alpha-amylase; beta-alp 46.0 13 0.00045 32.8 3.2 24 224-247 74-97 (422)
301 4aie_A Glucan 1,6-alpha-glucos 45.9 15 0.0005 33.5 3.6 24 223-246 78-101 (549)
302 2z1k_A (NEO)pullulanase; hydro 45.5 15 0.00052 32.9 3.6 24 223-246 95-118 (475)
303 2rfg_A Dihydrodipicolinate syn 45.3 11 0.00038 31.7 2.5 59 181-244 14-75 (297)
304 3o63_A Probable thiamine-phosp 45.1 30 0.001 28.1 5.0 51 187-245 46-103 (243)
305 3ikh_A Carbohydrate kinase; tr 44.4 1.3E+02 0.0044 24.6 9.7 52 204-263 131-184 (299)
306 1k4i_A 3,4-dihydroxy-2-butanon 44.2 36 0.0012 27.4 5.2 36 204-243 167-212 (233)
307 2vc6_A MOSA, dihydrodipicolina 43.6 10 0.00035 31.8 2.0 59 181-244 14-75 (292)
308 2wc7_A Alpha amylase, catalyti 43.3 16 0.00056 32.8 3.5 23 224-246 102-124 (488)
309 2dh2_A 4F2 cell-surface antige 42.6 20 0.00069 31.7 3.9 24 224-247 81-104 (424)
310 3keo_A Redox-sensing transcrip 41.7 70 0.0024 25.3 6.6 129 80-248 46-182 (212)
311 2him_A L-asparaginase 1; hydro 41.3 79 0.0027 27.3 7.3 48 185-243 241-289 (358)
312 3bc9_A AMYB, alpha amylase, ca 41.1 19 0.00065 33.5 3.6 23 224-246 208-230 (599)
313 1m53_A Isomaltulose synthase; 40.8 19 0.00066 33.1 3.6 24 223-246 91-114 (570)
314 1w41_A 50S ribosomal protein L 40.6 44 0.0015 22.8 4.7 43 187-243 21-63 (101)
315 4aef_A Neopullulanase (alpha-a 40.3 20 0.00067 33.7 3.6 58 186-246 237-307 (645)
316 3edf_A FSPCMD, cyclomaltodextr 40.2 20 0.00068 33.3 3.6 24 223-246 197-220 (601)
317 3pzt_A Endoglucanase; alpha/be 39.9 20 0.00067 30.5 3.3 23 224-246 104-126 (327)
318 1uok_A Oligo-1,6-glucosidase; 39.8 21 0.00071 32.8 3.6 24 223-246 77-100 (558)
319 3on1_A BH2414 protein; structu 39.5 50 0.0017 22.5 4.8 44 187-244 23-66 (101)
320 3cpq_A 50S ribosomal protein L 39.4 49 0.0017 23.1 4.8 43 187-243 26-68 (110)
321 1wzl_A Alpha-amylase II; pullu 39.4 20 0.00067 33.3 3.4 26 223-248 218-243 (585)
322 3vup_A Beta-1,4-mannanase; TIM 39.3 21 0.00072 29.4 3.4 21 225-245 90-110 (351)
323 2r91_A 2-keto-3-deoxy-(6-phosp 39.3 18 0.00061 30.2 2.8 51 182-237 13-63 (286)
324 1zja_A Trehalulose synthase; s 39.3 21 0.00073 32.8 3.6 23 224-246 79-101 (557)
325 1j0h_A Neopullulanase; beta-al 39.2 21 0.00072 33.0 3.6 25 224-248 222-246 (588)
326 2ze0_A Alpha-glucosidase; TIM 38.8 20 0.00069 32.9 3.4 23 224-246 78-100 (555)
327 1cyg_A Cyclodextrin glucanotra 38.8 21 0.00073 33.7 3.6 24 223-246 110-133 (680)
328 1bqc_A Protein (beta-mannanase 38.4 25 0.00086 29.2 3.7 23 223-245 63-85 (302)
329 3vzx_A Heptaprenylglyceryl pho 38.2 79 0.0027 25.4 6.4 60 186-260 20-79 (228)
330 1qho_A Alpha-amylase; glycosid 38.2 22 0.00076 33.6 3.6 23 224-246 107-129 (686)
331 1d3c_A Cyclodextrin glycosyltr 38.1 22 0.00076 33.6 3.6 23 224-246 115-137 (686)
332 2zic_A Dextran glucosidase; TI 38.0 21 0.00073 32.6 3.4 24 223-246 77-100 (543)
333 7a3h_A Endoglucanase; hydrolas 37.8 22 0.00076 29.6 3.3 23 224-246 79-101 (303)
334 3v7q_A Probable ribosomal prot 37.6 63 0.0022 22.1 5.1 46 187-246 24-69 (101)
335 3aj7_A Oligo-1,6-glucosidase; 37.6 23 0.0008 32.8 3.6 23 224-246 87-109 (589)
336 3kts_A Glycerol uptake operon 37.2 53 0.0018 25.6 5.1 42 186-243 18-59 (192)
337 3noy_A 4-hydroxy-3-methylbut-2 37.1 24 0.00083 30.5 3.3 48 184-244 92-139 (366)
338 4aee_A Alpha amylase, catalyti 37.0 24 0.00081 33.5 3.6 58 186-246 263-333 (696)
339 3nl6_A Thiamine biosynthetic b 37.0 41 0.0014 30.9 5.1 49 187-245 28-76 (540)
340 2whl_A Beta-mannanase, baman5; 36.7 24 0.00083 29.2 3.3 24 223-246 62-85 (294)
341 1tvn_A Cellulase, endoglucanas 36.5 27 0.00091 28.9 3.5 22 225-246 79-100 (293)
342 3bmv_A Cyclomaltodextrin gluca 36.5 23 0.0008 33.5 3.5 23 224-246 116-138 (683)
343 1ub0_A THID, phosphomethylpyri 36.2 49 0.0017 26.5 5.1 28 219-246 77-105 (258)
344 3b1s_B Flagellar biosynthetic 41.8 7.8 0.00027 26.2 0.0 20 227-246 29-48 (87)
345 3jug_A Beta-mannanase; TIM-bar 35.2 26 0.0009 30.1 3.3 24 223-246 85-108 (345)
346 1ea9_C Cyclomaltodextrinase; h 35.0 23 0.0008 32.7 3.2 60 186-248 170-242 (583)
347 2jli_A YSCU, YOP proteins tran 34.8 22 0.00077 25.6 2.3 20 227-246 73-92 (123)
348 2l82_A Designed protein OR32; 34.6 94 0.0032 21.7 5.4 49 186-243 60-108 (162)
349 3czg_A Sucrose hydrolase; (alp 34.5 28 0.00095 32.7 3.6 59 186-247 104-178 (644)
350 1egz_A Endoglucanase Z, EGZ, C 34.3 31 0.001 28.4 3.5 22 225-246 77-98 (291)
351 1g5a_A Amylosucrase; glycosylt 34.3 28 0.00097 32.6 3.6 23 224-246 162-184 (628)
352 4hty_A Cellulase; (alpha/beta) 34.1 30 0.001 29.7 3.5 23 224-246 120-142 (359)
353 3u5e_c L32, RP73, YL38, 60S ri 33.9 62 0.0021 22.3 4.6 46 187-246 27-73 (105)
354 2ki0_A DS119; beta-alpha-beta, 33.6 28 0.00097 18.2 2.0 19 223-241 13-31 (36)
355 2ya0_A Putative alkaline amylo 33.5 28 0.00097 33.1 3.5 25 224-248 254-278 (714)
356 1jxh_A Phosphomethylpyrimidine 33.5 68 0.0023 26.3 5.6 28 219-246 101-129 (288)
357 2e8y_A AMYX protein, pullulana 33.5 28 0.00097 33.1 3.5 25 224-248 315-339 (718)
358 3bzs_A ESCU; auto cleavage pro 33.3 24 0.00082 26.0 2.3 20 227-246 83-102 (137)
359 1g01_A Endoglucanase; alpha/be 33.1 30 0.001 29.7 3.4 23 225-247 90-112 (364)
360 2cks_A Endoglucanase E-5; carb 32.1 32 0.0011 28.6 3.3 22 225-246 80-101 (306)
361 3vgf_A Malto-oligosyltrehalose 31.9 31 0.0011 31.7 3.5 25 224-248 167-191 (558)
362 2bhu_A Maltooligosyltrehalose 31.7 32 0.0011 32.0 3.5 25 224-248 192-216 (602)
363 2wsk_A Glycogen debranching en 31.7 32 0.0011 32.4 3.5 25 224-248 241-265 (657)
364 3iz5_f 60S ribosomal protein L 31.5 92 0.0031 21.8 5.1 53 187-253 31-84 (112)
365 3n9k_A Glucan 1,3-beta-glucosi 31.3 35 0.0012 29.9 3.5 23 223-245 111-133 (399)
366 2jlj_A YSCU, YOP proteins tran 31.3 27 0.00093 26.0 2.3 20 227-246 82-101 (144)
367 2aif_A Ribosomal protein L7A; 31.3 89 0.003 22.7 5.2 46 187-245 46-91 (135)
368 1m7x_A 1,4-alpha-glucan branch 31.1 33 0.0011 32.0 3.5 25 224-248 204-228 (617)
369 1o7j_A L-asparaginase; atomic 31.0 1.1E+02 0.0039 25.9 6.6 51 185-248 229-279 (327)
370 1qnr_A Endo-1,4-B-D-mannanase; 30.8 32 0.0011 29.0 3.1 23 224-246 89-111 (344)
371 2j9r_A Thymidine kinase; TK1, 30.8 1.3E+02 0.0046 23.7 6.6 50 204-260 101-158 (214)
372 4a18_G RPL30; ribosome, eukary 30.7 75 0.0026 21.8 4.6 46 187-246 27-73 (104)
373 1yht_A DSPB; beta barrel, hydr 30.7 40 0.0014 29.2 3.7 25 219-243 89-113 (367)
374 1h4p_A Glucan 1,3-beta-glucosi 30.6 37 0.0012 29.9 3.5 24 223-246 112-135 (408)
375 1h1n_A Endo type cellulase ENG 30.5 38 0.0013 28.2 3.5 23 225-247 72-94 (305)
376 4a1f_A DNAB helicase, replicat 30.4 65 0.0022 27.5 5.0 60 184-244 137-202 (338)
377 3ff4_A Uncharacterized protein 30.3 47 0.0016 23.7 3.5 15 228-242 95-109 (122)
378 1qwg_A PSL synthase;, (2R)-pho 30.0 69 0.0023 26.2 4.7 54 185-246 23-76 (251)
379 1b93_A Protein (methylglyoxal 29.9 1.2E+02 0.004 22.7 5.7 48 188-245 72-120 (152)
380 2wlt_A L-asparaginase; hydrola 29.8 1.2E+02 0.0042 25.7 6.6 51 185-248 230-280 (332)
381 2vr5_A Glycogen operon protein 29.8 33 0.0011 32.7 3.3 25 224-248 266-290 (718)
382 3aml_A OS06G0726400 protein; s 29.6 38 0.0013 32.5 3.7 26 223-248 249-274 (755)
383 3zss_A Putative glucanohydrola 29.6 38 0.0013 32.2 3.6 24 224-247 320-343 (695)
384 2i5b_A Phosphomethylpyrimidine 29.5 73 0.0025 25.7 5.1 28 219-246 81-109 (271)
385 2wan_A Pullulanase; hydrolase, 29.4 36 0.0012 33.5 3.5 25 224-248 531-555 (921)
386 3m07_A Putative alpha amylase; 29.4 37 0.0013 31.7 3.5 26 223-248 201-226 (618)
387 3qr3_A Endoglucanase EG-II; TI 29.3 41 0.0014 28.8 3.5 25 224-248 83-107 (340)
388 2c0h_A Mannan endo-1,4-beta-ma 29.2 40 0.0014 28.4 3.5 21 224-244 90-110 (353)
389 1gjw_A Maltodextrin glycosyltr 29.2 37 0.0013 31.7 3.5 25 224-248 181-205 (637)
390 1ceo_A Cellulase CELC; glycosy 29.1 41 0.0014 28.3 3.5 24 224-247 68-91 (343)
391 3nbm_A PTS system, lactose-spe 29.0 78 0.0027 22.0 4.4 56 204-265 6-62 (108)
392 2dt5_A AT-rich DNA-binding pro 28.9 1.9E+02 0.0066 22.6 7.2 125 82-248 44-174 (211)
393 3bh0_A DNAB-like replicative h 28.4 1.3E+02 0.0044 25.0 6.6 57 185-243 162-226 (315)
394 1agx_A Glutaminase-asparaginas 28.3 69 0.0024 27.3 4.8 52 185-248 227-278 (331)
395 3ie7_A LIN2199 protein; phosph 28.2 81 0.0028 26.1 5.2 39 204-246 133-171 (320)
396 3ucq_A Amylosucrase; thermosta 28.2 41 0.0014 31.6 3.6 24 223-246 159-182 (655)
397 1wsa_A Asparaginase, asparagin 28.0 1.3E+02 0.0043 25.6 6.4 51 185-248 227-277 (330)
398 1bf2_A Isoamylase; hydrolase, 28.0 40 0.0014 32.3 3.5 25 224-248 272-296 (750)
399 1ece_A Endocellulase E1; glyco 27.9 44 0.0015 28.3 3.5 24 223-246 93-116 (358)
400 1ji1_A Alpha-amylase I; beta/a 27.4 38 0.0013 31.7 3.2 61 186-248 189-266 (637)
401 3dr5_A Putative O-methyltransf 27.1 2.2E+02 0.0075 22.1 9.6 70 80-150 18-90 (221)
402 1nns_A L-asparaginase II; amid 27.1 86 0.0029 26.6 5.1 46 185-242 223-268 (326)
403 2cvh_A DNA repair and recombin 27.1 1.1E+02 0.0039 23.2 5.7 40 204-243 105-151 (220)
404 1wky_A Endo-beta-1,4-mannanase 27.0 45 0.0015 29.8 3.5 24 223-246 70-93 (464)
405 3aie_A Glucosyltransferase-SI; 26.9 44 0.0015 32.5 3.6 26 223-248 691-716 (844)
406 2fcj_A Small toprim domain pro 26.9 21 0.00071 25.7 1.0 50 184-248 13-62 (119)
407 3l55_A B-1,4-endoglucanase/cel 26.8 43 0.0015 28.8 3.3 24 224-247 90-113 (353)
408 2xw6_A MGS, methylglyoxal synt 26.7 97 0.0033 22.6 4.7 46 189-244 65-111 (134)
409 3k1d_A 1,4-alpha-glucan-branch 26.7 45 0.0015 31.8 3.6 26 223-248 311-336 (722)
410 3nco_A Endoglucanase fncel5A; 26.6 49 0.0017 27.6 3.5 24 224-247 81-104 (320)
411 3b0z_B Flagellar biosynthetic 32.6 14 0.00047 26.4 0.0 20 227-246 29-48 (114)
412 3gnh_A L-lysine, L-arginine ca 26.4 81 0.0028 26.8 5.0 26 219-244 201-226 (403)
413 3otx_A Adenosine kinase, putat 26.3 1.4E+02 0.0049 24.9 6.6 54 205-263 163-224 (347)
414 3ndz_A Endoglucanase D; cellot 26.2 43 0.0015 28.5 3.1 25 224-248 82-106 (345)
415 3tc3_A UV damage endonuclease; 26.1 61 0.0021 27.4 3.9 32 207-246 191-222 (310)
416 1iv8_A Maltooligosyl trehalose 25.9 46 0.0016 31.7 3.5 23 224-246 65-87 (720)
417 2lbw_A H/ACA ribonucleoprotein 25.9 98 0.0034 21.9 4.6 47 187-246 25-71 (121)
418 3aof_A Endoglucanase; glycosyl 25.8 51 0.0018 27.3 3.5 24 224-247 73-96 (317)
419 2f6k_A Metal-dependent hydrola 25.7 80 0.0027 25.8 4.7 51 186-245 105-155 (307)
420 1edg_A Endoglucanase A; family 25.6 47 0.0016 28.6 3.3 25 224-248 100-124 (380)
421 2hbv_A 2-amino-3-carboxymucona 25.5 85 0.0029 26.2 4.9 50 186-245 129-178 (334)
422 2osx_A Endoglycoceramidase II; 25.5 50 0.0017 29.6 3.5 21 225-245 105-125 (481)
423 3k8k_A Alpha-amylase, SUSG; al 25.4 49 0.0017 31.2 3.6 59 185-246 57-128 (669)
424 2ya1_A Putative alkaline amylo 25.3 44 0.0015 33.3 3.3 25 224-248 561-585 (1014)
425 3nxk_A Cytoplasmic L-asparagin 25.1 1E+02 0.0034 26.3 5.2 47 185-243 233-279 (334)
426 3ttq_A Dextransucrase; (beta/a 25.0 51 0.0017 33.0 3.6 25 223-247 911-935 (1108)
427 3ayr_A Endoglucanase; TIM barr 25.0 49 0.0017 28.5 3.3 24 224-247 102-125 (376)
428 1vjz_A Endoglucanase; TM1752, 24.7 50 0.0017 27.8 3.3 24 223-246 75-98 (341)
429 1pq4_A Periplasmic binding pro 24.6 1.9E+02 0.0066 23.8 6.9 77 140-243 189-265 (291)
430 3icg_A Endoglucanase D; cellul 24.5 49 0.0017 30.0 3.3 23 225-247 86-108 (515)
431 3feq_A Putative amidohydrolase 24.4 1.1E+02 0.0037 26.2 5.5 26 219-244 206-231 (423)
432 1to3_A Putative aldolase YIHT; 24.4 51 0.0017 27.7 3.2 21 225-245 142-162 (304)
433 2fv7_A Ribokinase; structural 24.4 1.3E+02 0.0044 25.1 5.8 25 223-247 165-189 (331)
434 1rh9_A Endo-beta-mannanase; en 24.3 56 0.0019 27.9 3.5 22 224-245 84-105 (373)
435 3umo_A 6-phosphofructokinase i 24.3 1.1E+02 0.0037 25.1 5.3 37 206-246 132-168 (309)
436 3lda_A DNA repair protein RAD5 24.3 1.4E+02 0.0048 26.1 6.1 39 204-243 273-323 (400)
437 2abq_A Fructose 1-phosphate ki 24.2 1.2E+02 0.0039 24.9 5.4 39 204-246 125-163 (306)
438 3e2i_A Thymidine kinase; Zn-bi 24.0 1.2E+02 0.0041 24.1 5.1 50 204-260 101-158 (219)
439 3klk_A Glucansucrase; native f 23.9 56 0.0019 32.6 3.7 24 224-247 745-768 (1039)
440 2y8k_A Arabinoxylanase, carboh 23.7 51 0.0018 29.7 3.3 22 224-245 79-100 (491)
441 3nvt_A 3-deoxy-D-arabino-heptu 23.6 1.1E+02 0.0037 26.7 5.2 39 222-260 190-229 (385)
442 2ale_A SNU13, NHP2/L7AE family 23.5 1.3E+02 0.0043 21.9 4.8 47 187-246 37-83 (134)
443 2xzm_U Ribosomal protein L7AE 23.5 1.2E+02 0.004 21.8 4.6 46 187-245 29-74 (126)
444 3l6u_A ABC-type sugar transpor 23.4 94 0.0032 24.9 4.7 58 170-243 37-94 (293)
445 3nl6_A Thiamine biosynthetic b 23.2 1.2E+02 0.004 27.8 5.6 51 185-248 294-344 (540)
446 1xx6_A Thymidine kinase; NESG, 23.1 2.5E+02 0.0086 21.4 7.1 50 204-260 81-138 (191)
447 3dmy_A Protein FDRA; predicted 22.9 1.1E+02 0.0036 27.7 5.1 46 186-246 49-94 (480)
448 3faw_A Reticulocyte binding pr 22.8 57 0.0019 31.9 3.5 24 224-247 369-392 (877)
449 1vmd_A MGS, methylglyoxal synt 22.7 1.5E+02 0.0051 22.8 5.2 49 188-246 88-137 (178)
450 4pga_A Glutaminase-asparaginas 22.7 92 0.0031 26.6 4.5 47 185-243 233-279 (337)
451 2jep_A Xyloglucanase; family 5 22.6 54 0.0019 28.3 3.1 25 224-248 109-133 (395)
452 2r8c_A Putative amidohydrolase 22.6 1.1E+02 0.0038 26.3 5.2 26 219-244 209-234 (426)
453 2wm1_A 2-amino-3-carboxymucona 22.4 96 0.0033 25.8 4.6 50 187-245 126-175 (336)
454 2f02_A Tagatose-6-phosphate ki 22.4 1.4E+02 0.0047 24.7 5.6 39 204-246 129-167 (323)
455 3dc7_A Putative uncharacterize 22.2 1.1E+02 0.0038 23.6 4.7 19 224-242 160-178 (232)
456 3ij6_A Uncharacterized metal-d 22.2 1.2E+02 0.004 25.3 5.1 50 187-245 113-162 (312)
457 1n0w_A DNA repair protein RAD5 22.0 1.7E+02 0.0057 22.6 5.8 39 204-243 119-169 (243)
458 2vt3_A REX, redox-sensing tran 22.0 2.1E+02 0.0072 22.5 6.3 43 188-248 137-179 (215)
459 3jyw_G 60S ribosomal protein L 21.9 95 0.0033 21.8 3.7 52 186-250 29-80 (113)
460 3qho_A Endoglucanase, 458AA lo 21.9 65 0.0022 28.8 3.5 24 224-247 133-156 (458)
461 3pzg_A Mannan endo-1,4-beta-ma 21.6 62 0.0021 28.2 3.3 23 224-246 99-121 (383)
462 1uuq_A Mannosyl-oligosaccharid 21.5 67 0.0023 28.3 3.5 22 224-245 110-131 (440)
463 2d6f_A Glutamyl-tRNA(Gln) amid 21.5 1.3E+02 0.0044 26.7 5.3 47 185-243 313-359 (435)
464 2ab1_A Hypothetical protein; H 21.3 2.2E+02 0.0076 20.1 5.7 49 185-247 49-98 (122)
465 4aio_A Limit dextrinase; hydro 21.1 63 0.0022 31.2 3.5 24 224-247 378-401 (884)
466 3s5s_A Mandelate racemase/muco 21.1 2.2E+02 0.0077 24.5 6.8 55 204-266 215-274 (389)
467 3mfq_A TROA, high-affinity zin 20.6 59 0.002 26.9 2.8 62 168-243 178-243 (282)
468 4e84_A D-beta-D-heptose 7-phos 20.6 1.7E+02 0.0057 24.7 5.8 37 204-246 186-222 (352)
469 2yl5_A Beta-N-acetylhexosamini 20.6 61 0.0021 28.8 3.1 25 219-243 89-113 (442)
470 3m9w_A D-xylose-binding peripl 20.4 1E+02 0.0036 25.0 4.4 31 204-243 58-88 (313)
471 3h74_A Pyridoxal kinase; PSI-I 20.4 1.8E+02 0.006 23.8 5.8 35 204-246 74-109 (282)
472 3w01_A Heptaprenylglyceryl pho 20.4 2.2E+02 0.0075 22.9 6.0 65 181-260 20-84 (235)
473 3nur_A Amidohydrolase; TIM bar 20.2 94 0.0032 26.6 4.1 51 186-245 143-193 (357)
474 1ytl_A Acetyl-COA decarboxylas 20.1 1.3E+02 0.0044 22.9 4.5 45 185-244 22-67 (174)
No 1
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.95 E-value=1.1e-27 Score=212.01 Aligned_cols=210 Identities=48% Similarity=0.790 Sum_probs=166.6
Q ss_pred CeeeeeccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEE
Q psy5413 66 IRTVDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEII 145 (285)
Q Consensus 66 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi 145 (285)
+.+++|.++....+++++++++.+...+...|++++...+|++.+++++|.+..++++||++|+.+++++++ ++||+|+
T Consensus 3 ~~~i~~~~~~~~~p~~~~~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~-~~gd~Vl 81 (347)
T 1jg8_A 3 HMMIDLRSDTVTKPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHT-QRGDEVI 81 (347)
T ss_dssp --CEECSCGGGCCCCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHC-CTTCEEE
T ss_pred ceEEEeccccCCCCCHHHHHHHhcCCCCCcccCCChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhc-CCCCEEE
Confidence 356899988878889999999987654445677788899999999999999989999999999999998876 6899999
Q ss_pred ecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHH
Q psy5413 146 VGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQ 225 (285)
Q Consensus 146 ~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~ 225 (285)
+++++|..++...... ...|.+++.+ ..+++.+|+++|+++|++.. .+.+++++|++++|+||+||.++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~------~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~-~~~~~~~~v~~~~~~npt~G~~~~~~ 153 (347)
T 1jg8_A 82 LEADSHIFWYEVGAMA------VLSGVMPHPV-PGKNGAMDPDDVRKAIRPRN-IHFPRTSLIAIENTHNRSGGRVVPLE 153 (347)
T ss_dssp EETTCHHHHSSTTHHH------HHTCCEEEEE-CEETTEECHHHHHHHSCCSC-TTSCCEEEEEEESSBTTTTSBCCCHH
T ss_pred EcCcchhhhccccchh------hccCeEEEEe-cCCCCccCHHHHHHHhcccc-ccccCceEEEEeccccccCCccCcHH
Confidence 9999987654322122 2347777777 43556689999999997510 01126899999999999989999999
Q ss_pred HHHHHHHHHHHcCCeEEEeCccC---------ChhhhcccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 226 WLRELKARCQEHNIPVHMDGARL---------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 226 ~l~~i~~la~~~gi~li~Dea~~---------~~~~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
++++|+++|++||+++|+||+|. ....+..++|.+++++||++++|.|+++++++++++
T Consensus 154 ~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~ 221 (347)
T 1jg8_A 154 NIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIE 221 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHH
T ss_pred HHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCHHHHH
Confidence 99999999999999999999863 122233578988889999999988887877776653
No 2
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.94 E-value=1.6e-25 Score=198.42 Aligned_cols=208 Identities=19% Similarity=0.309 Sum_probs=164.3
Q ss_pred CeeeeeccCCcCCCcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHcCCCc-EEEcCChHHHHHHHHHHccccCCCe
Q psy5413 66 IRTVDIRSDTISKPTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLAGKEA-AIFVPSGTMGNLIAIMTHCDRRDSE 143 (285)
Q Consensus 66 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~g~~~-~~~~~~Gs~a~~~al~~~~~~~g~~ 143 (285)
+.++||.++++.+++|++++++.++..+ ...|+..+...++++.+++++|.+. +++++||++|++.++++++ ++|++
T Consensus 7 ~~~id~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~-~~gd~ 85 (356)
T 1v72_A 7 PPALGFSSDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMT-PPWGN 85 (356)
T ss_dssp CCCCBCSCGGGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSC-CTTEE
T ss_pred CceEeeccCCccCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhc-CCCCE
Confidence 4678999998888999999999987654 3566667888999999999999655 5899999999999999987 58999
Q ss_pred EEecCCcceeeeccccccccccccccc-ceeeeeeecCCCCCCCHHHHHH-HhcccccccCCceEEEEEecccCCCCeee
Q psy5413 144 IIVGDCSHIMLWEQGGASQTSVYSQIG-RVLMRGVTNQKDGTFDLDEMEA-KFSTADNIHCASTSLVCVENTHNYCGGTV 221 (285)
Q Consensus 144 vi~~~~~h~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~d~~~l~~-~i~~~~~~~~~~~~~v~i~~~~n~~gG~~ 221 (285)
|+++.++|........+. ... |.+++.++.+ ++.+|+++|++ ++++..+.++.++++|++++|+| + |.+
T Consensus 86 vi~~~~~~~~~~~~~~~~------~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-t-G~~ 156 (356)
T 1v72_A 86 IYCHPASHINNDECGAPE------FFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-V-GSI 156 (356)
T ss_dssp EEECTTSHHHHSSTTHHH------HHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-T-SCC
T ss_pred EEEcCccchhhhhchHHH------HHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-C-Ccc
Confidence 999999887654421122 122 7788888763 46789999999 88752112334689999999886 6 899
Q ss_pred CCHHHHHHHHHHHHHcCCeEEEeCccCC---------hhhh--cccCCeEEEecccccCccee-EEeecCccccc
Q psy5413 222 LPMQWLRELKARCQEHNIPVHMDGARLP---------LAEV--CASVDTVMFCLSKGLGAPVG-SILAGPEEFIQ 284 (285)
Q Consensus 222 ~~~~~l~~i~~la~~~gi~li~Dea~~~---------~~~~--~~~~dv~~~s~sK~l~~p~g-g~~~~~~~~i~ 284 (285)
++.+++++|+++|++||+++|+||+|.. .... ..++|++++++||+ ++|.| |++++++++++
T Consensus 157 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~~~~~ 230 (356)
T 1v72_A 157 YTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNTSLAT 230 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSGGGHH
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECHHHHh
Confidence 9999999999999999999999999861 1111 13688999999999 66888 68888887754
No 3
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.93 E-value=1.1e-25 Score=205.65 Aligned_cols=224 Identities=14% Similarity=0.138 Sum_probs=161.3
Q ss_pred CccccccccccccccCCCCCccceeeccCCccccccccCCeeeeeccCCcCCCcHHHHHHHHhcccCCC-CccCChhHHH
Q psy5413 27 PALVESTPLSRSWSDNGNLSIPAMYCWLLPVPLRLGKVNIRTVDIRSDTISKPTMEMKNYMFNCEVGDD-VYLEDPTCKE 105 (285)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~y~~~~~~~~ 105 (285)
|..+.++.+.++|+..++.+++.+..|+.. +.++.||+|.+|+.+++.... .....+...+
T Consensus 70 P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~------------------~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~ 131 (454)
T 4ao9_A 70 PLTIARGEGAALWDADGHRYADFIAEYTAG------------------VYGHSAPEIRDAVIEAMQGGINLTGHNLLEGR 131 (454)
T ss_dssp CCEEEEEETTEEEETTCCEEEESSGGGGTT------------------TTCSCCHHHHHHHHHHHHTCSCCCSEESSHHH
T ss_pred CccEEEeecCEEEECCCCEEEEccccHHhh------------------cccCCCHHHHHHHHHHHhcCCCccCCcHHHHH
Confidence 566667777777776666666655555543 237799999999998876533 2234566789
Q ss_pred HHHHHHhHc-CCCcEEEcCChHHHHHHHHHHccccCCCe-EE-ecCCcceeeecccccccccccccccc--eeeeeeecC
Q psy5413 106 LQEKAAKLA-GKEAAIFVPSGTMGNLIAIMTHCDRRDSE-II-VGDCSHIMLWEQGGASQTSVYSQIGR--VLMRGVTNQ 180 (285)
Q Consensus 106 l~~~la~~~-g~~~~~~~~~Gs~a~~~al~~~~~~~g~~-vi-~~~~~h~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~ 180 (285)
+++.|++++ +.+.++|++|||+|++.|++++...+|+. |+ ....||+.+...+... .... .....+|.
T Consensus 132 lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~------~~~~~~~~~~~~p~- 204 (454)
T 4ao9_A 132 LARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARP------SPTTVPFDFLVLPY- 204 (454)
T ss_dssp HHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSB------CTTSCCSEEEEECT-
T ss_pred HHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccc------cCccCCCCcccCCC-
Confidence 999999987 56778999999999999999987656653 33 3678888765443332 1111 12222332
Q ss_pred CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC---hhhhcccC
Q psy5413 181 KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP---LAEVCASV 257 (285)
Q Consensus 181 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~---~~~~~~~~ 257 (285)
.|++.+++.+++ +++++++|++|++++..|....++++|++|+++|++||++||+||++++ .....+++
T Consensus 205 ----nd~~~l~~~l~~----~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~ 276 (454)
T 4ao9_A 205 ----NDAQTARAQIER----HGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKL 276 (454)
T ss_dssp ----TCHHHHHHHHHH----TGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHH
T ss_pred ----chHHHHHHHHhh----cCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhcc
Confidence 389999999987 4558999999999999877788899999999999999999999999873 33333444
Q ss_pred CeE--EEecccccCc--ceeEEeecCccccc
Q psy5413 258 DTV--MFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 258 dv~--~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
++. +.+++|.+++ |+|+++ +++++++
T Consensus 277 gv~PDi~t~gK~lggG~Piga~~-~~~ei~~ 306 (454)
T 4ao9_A 277 GIRSDLTTLGKYIGGGMSFGAFG-GRADVMA 306 (454)
T ss_dssp TCCCSEEEEEGGGGTTSSCEEEE-ECHHHHG
T ss_pred CCCCcEEEeccccCCCCcceeee-eHHHHHH
Confidence 444 5677799987 877655 4455543
No 4
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.93 E-value=2.4e-26 Score=204.28 Aligned_cols=196 Identities=28% Similarity=0.467 Sum_probs=157.1
Q ss_pred ccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCe--EEecCC
Q psy5413 72 RSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSE--IIVGDC 149 (285)
Q Consensus 72 ~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~--vi~~~~ 149 (285)
.+.++.+++|++.+++.+.. +...|+.++...++++.+++++|.+..++++||++|+..++++++ .+|++ |++++.
T Consensus 20 ~~~~~~g~~p~v~~ai~~~~-~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~-~~g~~~vvi~~~~ 97 (359)
T 3pj0_A 20 NGPRNVGVLTEALQNIDDNL-ESDIYGNGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWA-DRKENRRVAYHPL 97 (359)
T ss_dssp SSCCBHHHHHHHTTTSCTTC-BCCBTTBSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHH-HHHTCCEEEECTT
T ss_pred CCccccCCCHHHHHHHHhhc-ccCcccCCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHH-hcCCCcEEEEecc
Confidence 34455557889999888743 345677788899999999999999888888999999999999987 46665 566777
Q ss_pred cceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHH
Q psy5413 150 SHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRE 229 (285)
Q Consensus 150 ~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~ 229 (285)
+|.+........ ...|.+++.++. +++.+|+++|+++ .+ ++++|++++|+|++||.+++.+++++
T Consensus 98 ~~~~~~~~~~~~------~~~g~~~~~v~~-~~~~~d~~~l~~~-~~-------~~~~v~~~~p~n~~~G~~~~~~~l~~ 162 (359)
T 3pj0_A 98 SHLEIHEQDGLK------ELQQITPLLLGT-ANQLLTIDDIKSL-RE-------PVSSVLIELPQREIGGQLPAFEELEK 162 (359)
T ss_dssp CHHHHSSTTHHH------HHHCCEEEECSC-TTSCCCHHHHHTC-SS-------CCSEEEEESSBGGGTSBCCCHHHHHH
T ss_pred ceeeehhcchHH------HhcCceEEecCC-cCCCcCHHHHHhc-cC-------CceEEEEEecccCCCcccCCHHHHHH
Confidence 776554433332 234788888887 5678999999988 44 78999999999998889999999999
Q ss_pred HHHHHHHcCCeEEEeCccC---------ChhhhcccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 230 LKARCQEHNIPVHMDGARL---------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 230 i~~la~~~gi~li~Dea~~---------~~~~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
|+++|++||++||+|++|. ....+...+|+++.|+||++++|.||++++++++++
T Consensus 163 l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~l~~ 226 (359)
T 3pj0_A 163 ISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGNDDFVQ 226 (359)
T ss_dssp HHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEECHHHHH
T ss_pred HHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECCHHHHH
Confidence 9999999999999999975 122233577999999999999988889888887764
No 5
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.93 E-value=5.6e-26 Score=201.89 Aligned_cols=174 Identities=30% Similarity=0.479 Sum_probs=142.2
Q ss_pred CCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCC--eEEecCCcceeeecccccccccccccccc
Q psy5413 94 DDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDS--EIIVGDCSHIMLWEQGGASQTSVYSQIGR 171 (285)
Q Consensus 94 ~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~--~vi~~~~~h~~~~~~~~~~~~~~~~~~~g 171 (285)
...|+.++...+|++.+++++|.+..+++++|++|+..++++++. +|+ .|++++.+|.+........ ...|
T Consensus 40 ~~~y~~~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~-~gd~~~vi~~~~~~~~~~~~~~~~------~~~g 112 (357)
T 3lws_A 40 SDQYGTGAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSD-ETDNRTVAYHPLCHLEIHEQDGLK------ELHP 112 (357)
T ss_dssp CEETTEETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHH-HHTCCEEEECTTCHHHHSSTTHHH------HHSS
T ss_pred cccccCChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhh-cCCCcEEEecccceeeeeccchhh------hccC
Confidence 356777788999999999999998888889999999999998874 666 6777888886655432222 2347
Q ss_pred eeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC---
Q psy5413 172 VLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL--- 248 (285)
Q Consensus 172 ~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~--- 248 (285)
.+++.++. +++.+|+++|+++ . ++++|++++|+||+||.+++.+++++|+++|++||++||+||+|.
T Consensus 113 ~~~~~v~~-~~~~~d~~~l~~~--~-------~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~ 182 (357)
T 3lws_A 113 IETILVGA-ADRLMTLDEIKAL--P-------DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEM 182 (357)
T ss_dssp CEEEECSC-TTSCCCHHHHHTC--C-------SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHH
T ss_pred cEEEEecC-CCCCcCHHHHhcC--c-------CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhh
Confidence 88888875 5667999999887 2 478999999999988999999999999999999999999999975
Q ss_pred ------ChhhhcccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 249 ------PLAEVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 249 ------~~~~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
+...+...+|+++.|+||++++|.||++++++++++
T Consensus 183 ~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~~~~ 224 (357)
T 3lws_A 183 LPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPAAFCQ 224 (357)
T ss_dssp HHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECHHHHH
T ss_pred hhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCHHHHH
Confidence 222333568999999999998888899999887764
No 6
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.92 E-value=2.4e-24 Score=191.02 Aligned_cols=203 Identities=14% Similarity=0.087 Sum_probs=160.0
Q ss_pred cCCeeeeeccCCcC-CCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCC--CcEEEcCChHHHHHHHHHHccccC
Q psy5413 64 VNIRTVDIRSDTIS-KPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGK--EAAIFVPSGTMGNLIAIMTHCDRR 140 (285)
Q Consensus 64 ~~~~~~~~~~~~~~-~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~--~~~~~~~~Gs~a~~~al~~~~~~~ 140 (285)
.++++++|.++... .++|++.+++.+.......| +.+...++++.++++++. +.+++++||++|+..++++++ ++
T Consensus 14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~ 91 (354)
T 3ly1_A 14 STDNPIRINFNENPLGMSPKAQAAARDAVVKANRY-AKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYA-SL 91 (354)
T ss_dssp CSSSCEECSSCCCSSCCCHHHHHHHHHTGGGTTSC-CHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHC-CT
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHHhhCcCC-CCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHh-CC
Confidence 36788999876444 47889999999877655556 356789999999999985 457999999999999999986 68
Q ss_pred CCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCee
Q psy5413 141 DSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGT 220 (285)
Q Consensus 141 g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~ 220 (285)
|++|+++.++|....... ...|.+++.++.++++.+|+++|+++++++ +++++|++++|+||+ |.
T Consensus 92 gd~vl~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~~v~l~~p~npt-G~ 156 (354)
T 3ly1_A 92 EAQLVIPELTYGDGEHFA---------KIAGMKVTKVKMLDNWAFDIEGLKAAVAAY-----SGPSIVYLVNPNNPT-GT 156 (354)
T ss_dssp TCEEEEESSSCTHHHHHH---------HHTTCEEEEECCCTTSCCCHHHHHHHHHTC-----SSCEEEEEESSCTTT-CC
T ss_pred CCeEEECCCCchHHHHHH---------HHcCCEEEEecCCCCCCCCHHHHHHHhccC-----CCCCEEEEeCCCCCc-CC
Confidence 999999888876543322 244888999988767889999999999830 178999999999999 99
Q ss_pred eCCHHHHHHHHHHHHHcCCeEEEeCccCCh---------hhhcc---cCCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 221 VLPMQWLRELKARCQEHNIPVHMDGARLPL---------AEVCA---SVDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 221 ~~~~~~l~~i~~la~~~gi~li~Dea~~~~---------~~~~~---~~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
++|.+++++|+++| +||+++|+||+|..+ ..... ..++++.|+||+++. .+.|+++.++++++
T Consensus 157 ~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 233 (354)
T 3ly1_A 157 ITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIA 233 (354)
T ss_dssp CCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHH
T ss_pred CcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHH
Confidence 99988888888888 799999999998722 11111 333669999999973 56678888777653
No 7
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.92 E-value=3.5e-24 Score=193.98 Aligned_cols=195 Identities=15% Similarity=0.206 Sum_probs=156.7
Q ss_pred cCCeeeeeccCCcCC--CcHHHHHHHHhcccCC--------CCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHH
Q psy5413 64 VNIRTVDIRSDTISK--PTMEMKNYMFNCEVGD--------DVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 64 ~~~~~~~~~~~~~~~--~~~~v~~a~~~~~~~~--------~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al 133 (285)
.|++++||.++++.. ++|++.+++.+++... ..++..+...++++.+++++|.+..+++++|++|+..++
T Consensus 57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l 136 (409)
T 3kki_A 57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLL 136 (409)
T ss_dssp CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCeEEEecchHHHHHHHH
Confidence 378899998876543 6889999988776531 123344567889999999999998999999999999999
Q ss_pred HHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 134 MTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 134 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
++++ ++||.|++++++|..+...... .|.+++.++. .|+++|++++++. ++++|+++++
T Consensus 137 ~~~~-~~gd~Vl~~~~~~~~~~~~~~~---------~g~~~~~~~~-----~d~~~le~~l~~~------~~~~vi~~~~ 195 (409)
T 3kki_A 137 QTIC-QPNTNVYIDFFAHMSLWEGARY---------ANAQAHPFMH-----NNCDHLRMLIQRH------GPGIIVVDSI 195 (409)
T ss_dssp HHHC-CTTCEEEEETTSCHHHHHHHHH---------TTCEEEEECT-----TCHHHHHHHHHHH------CSCEEEEESB
T ss_pred HHhc-CCCCEEEECCCcCHHHHHHHHH---------cCCeEEEecC-----CCHHHHHHHHHhc------CCeEEEECCC
Confidence 9887 6999999999998766543222 3777776654 5899999999862 4799999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC--h-------h---hhcccCCeEEEecccccCcceeEEeecCcc
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP--L-------A---EVCASVDTVMFCLSKGLGAPVGSILAGPEE 281 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~--~-------~---~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~ 281 (285)
+|++ |.+.| +++|+++|++||++||+||+|+. + . ......|+++.|+||+++++ ||+++++++
T Consensus 196 ~npt-G~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~ 270 (409)
T 3kki_A 196 YSTL-GTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR-AGAIWCNNE 270 (409)
T ss_dssp CTTT-CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS-CEEEEESSS
T ss_pred CCCC-CCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC-ceEEEECHH
Confidence 9999 89999 99999999999999999999872 1 1 11235788899999999987 888988888
Q ss_pred ccc
Q psy5413 282 FIQ 284 (285)
Q Consensus 282 ~i~ 284 (285)
+++
T Consensus 271 ~~~ 273 (409)
T 3kki_A 271 VNR 273 (409)
T ss_dssp GGG
T ss_pred HHH
Confidence 765
No 8
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.91 E-value=9.2e-24 Score=192.52 Aligned_cols=198 Identities=17% Similarity=0.192 Sum_probs=157.4
Q ss_pred cCCeeeeeccCCc-C-CCcHHHHHHHHhcccC-C---C----CccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHH
Q psy5413 64 VNIRTVDIRSDTI-S-KPTMEMKNYMFNCEVG-D---D----VYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 64 ~~~~~~~~~~~~~-~-~~~~~v~~a~~~~~~~-~---~----~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al 133 (285)
.|++++||.++++ + .++|++.+++.++... . . .++..+...++++.+++++|.+..+++++|++|+..++
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al 141 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGII 141 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHH
Confidence 4688999998875 4 3788999998876542 1 1 22345778999999999999998899999999999999
Q ss_pred HHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 134 MTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 134 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
+++. ++|+.|+++.++|.++..... ..|.+++.++. .|+++|++++++..+ .++++|+++++
T Consensus 142 ~~l~-~~gd~vl~~~~~h~~~~~~~~---------~~g~~~~~~~~-----~d~~~le~~l~~~~~---~~~~~v~~~~~ 203 (427)
T 2w8t_A 142 STLA-GKGEYVILDADSHASIYDGCQ---------QGNAEIVRFRH-----NSVEDLDKRLGRLPK---EPAKLVVLEGV 203 (427)
T ss_dssp HHHS-CTTCEEEEETTCCHHHHHHHH---------HSCSEEEEECT-----TCHHHHHHHHHTSCS---SSCEEEEEESE
T ss_pred HHhc-CCCCEEEECCcccHHHHHHHH---------HcCCeeEEeCC-----CCHHHHHHHHHhccC---CCCeEEEEcCC
Confidence 9876 689999999999876654322 23777777763 599999999976211 26899999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh-h-----------hhcccCCeEEEecccccCcceeEEeecCcc
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL-A-----------EVCASVDTVMFCLSKGLGAPVGSILAGPEE 281 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~-~-----------~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~ 281 (285)
+|++ |.+.| +++|+++|++||+++|+||+|+.. . .+..+.|+++.|+||+++. .||+++++++
T Consensus 204 ~n~t-G~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~-~gG~v~~~~~ 278 (427)
T 2w8t_A 204 YSML-GDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGT-VGGFVVSNHP 278 (427)
T ss_dssp ETTT-TEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCS-CCEEEEECCT
T ss_pred CCCC-CCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhcc-CCCEEEeCHH
Confidence 9999 89999 999999999999999999998821 1 1123568889999999984 6788888888
Q ss_pred ccc
Q psy5413 282 FIQ 284 (285)
Q Consensus 282 ~i~ 284 (285)
+++
T Consensus 279 l~~ 281 (427)
T 2w8t_A 279 KFE 281 (427)
T ss_dssp TGG
T ss_pred HHH
Confidence 765
No 9
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=5.1e-24 Score=189.82 Aligned_cols=202 Identities=13% Similarity=0.185 Sum_probs=152.6
Q ss_pred eeeeecc-CCcCCCcHHHHHHHHhcccCC----------CCccCChhHHHHHHH-HHhHcCCCcEEEcCChHHHHHHHHH
Q psy5413 67 RTVDIRS-DTISKPTMEMKNYMFNCEVGD----------DVYLEDPTCKELQEK-AAKLAGKEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 67 ~~~~~~~-~~~~~~~~~v~~a~~~~~~~~----------~~y~~~~~~~~l~~~-la~~~g~~~~~~~~~Gs~a~~~al~ 134 (285)
.+++|.. .....+++++.+++.+..... ..+...+...++++. +++++|.+.+++++||++|+..+++
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~~v~~~~g~t~a~~~~~~ 87 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMH 87 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHH
T ss_pred CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHH
Confidence 3455555 334557889999998876532 123356778999999 9999998866888889999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeee--cCCCCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVT--NQKDGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
+++ ++|++|+++.++|....... ...|.+++.++ .++++.+|+++|++++++... + +++++|++++
T Consensus 88 ~~~-~~gd~vl~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~-~-~~~~~v~~~~ 155 (371)
T 2e7j_A 88 SLA-KKDAWVVMDENCHYSSYVAA---------ERAGLNIALVPKTDYPDYAITPENFAQTIEETKK-R-GEVVLALITY 155 (371)
T ss_dssp HHC-CTTCEEEEETTCCHHHHHHH---------HHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTT-T-SCEEEEEEES
T ss_pred HHh-CCCCEEEEccCcchHHHHHH---------HHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcc-c-CCeEEEEEEC
Confidence 986 58999999988876554432 24488888888 666678999999999974210 0 2789999999
Q ss_pred ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----hhhcccCCeEEEecccccCc-ceeEEeecCccccc
Q psy5413 213 THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----AEVCASVDTVMFCLSKGLGA-PVGSILAGPEEFIQ 284 (285)
Q Consensus 213 ~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----~~~~~~~dv~~~s~sK~l~~-p~gg~~~~~~~~i~ 284 (285)
++||+ |.++| +++|+++|++||+++|+||+|+.. .....+.|+++.|+||++++ ..+|+++.++++++
T Consensus 156 ~~npt-G~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~ 228 (371)
T 2e7j_A 156 PDGNY-GNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAE 228 (371)
T ss_dssp SCTTT-CCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTT
T ss_pred CCCCC-cccCC---HHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhh
Confidence 99999 89999 899999999999999999998821 11123678999999999887 45578888777654
No 10
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.91 E-value=7.1e-24 Score=191.82 Aligned_cols=202 Identities=16% Similarity=0.139 Sum_probs=157.8
Q ss_pred CCeeeeeccCCcCCCcHHHHHHHHhcccC--------CCCccC--ChhHHHHHHHHHhHcCC---CcEEEcCChHHHHHH
Q psy5413 65 NIRTVDIRSDTISKPTMEMKNYMFNCEVG--------DDVYLE--DPTCKELQEKAAKLAGK---EAAIFVPSGTMGNLI 131 (285)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~--------~~~y~~--~~~~~~l~~~la~~~g~---~~~~~~~~Gs~a~~~ 131 (285)
|+.+++|.++.+...++++.+++.+.... ...|+. .+...++++.++++++. +.+++++||++|+..
T Consensus 26 g~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~ 105 (420)
T 1t3i_A 26 GHPLVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINL 105 (420)
T ss_dssp TEECEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred CCceEEecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHH
Confidence 45678999888887788999998876542 122332 35688999999999998 568999999999999
Q ss_pred HHHHc----cccCCCeEEecCCcceeeec-ccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 132 AIMTH----CDRRDSEIIVGDCSHIMLWE-QGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 132 al~~~----~~~~g~~vi~~~~~h~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
+++++ + ++|++|+++.+.|..... ..... ...|.+++.++.++++.+|+++|++++++ +++
T Consensus 106 ~~~~~~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-------~~~ 171 (420)
T 1t3i_A 106 VAYSWGMNNL-KAGDEIITTVMEHHSNLVPWQMVA------AKTGAVLKFVQLDEQESFDLEHFKTLLSE-------KTK 171 (420)
T ss_dssp HHHHTHHHHC-CTTCEEEEETTCCGGGTHHHHHHH------HHHCCEEEEECBCTTSSBCHHHHHHHCCT-------TEE
T ss_pred HHHHhhhccc-CCCCEEEECcchhHHHHHHHHHHH------HhcCcEEEEeccCCCCCcCHHHHHHhhCC-------Cce
Confidence 99998 5 589999998887755311 01111 23477888888877777999999999987 799
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----hhhcccCCeEEEecccccCcceeEEeecCccc
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----AEVCASVDTVMFCLSKGLGAPVGSILAGPEEF 282 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----~~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~ 282 (285)
+|++++++|++ |.++| +++|+++|++||+++|+||+|+.. .....+.|+++.|+||.++++.+|+++.++++
T Consensus 172 ~v~~~~~~npt-G~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~G~~~~~~~~ 247 (420)
T 1t3i_A 172 LVTVVHISNTL-GCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEI 247 (420)
T ss_dssp EEEEESBCTTT-CBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHH
T ss_pred EEEEeCCcccc-cCcCC---HHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCCCceEEEEEchHH
Confidence 99999999999 99999 999999999999999999998821 11123579999999997765445788877766
Q ss_pred cc
Q psy5413 283 IQ 284 (285)
Q Consensus 283 i~ 284 (285)
++
T Consensus 248 ~~ 249 (420)
T 1t3i_A 248 LE 249 (420)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 11
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=9e-24 Score=190.09 Aligned_cols=202 Identities=16% Similarity=0.080 Sum_probs=157.8
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHc----CC----CcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLA----GK----EAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~----g~----~~~~~~~~Gs~a~~~al~ 134 (285)
|+.+++|.++.+.. .++.+.+++.+.... ...|...+...++++.+++++ |. +.+++++||++|+..+++
T Consensus 40 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~ 119 (389)
T 1o4s_A 40 GEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFM 119 (389)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHH
Confidence 56789998877653 567899998877653 345665556788999999987 53 457999999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
+++ ++|++|++++++|....... ...|.+++.++.++ ++.+|+++|++++++ ++++|++++
T Consensus 120 ~l~-~~gd~Vl~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~ 182 (389)
T 1o4s_A 120 ALL-DPGDEVIVFSPVWVSYIPQI---------ILAGGTVNVVETFMSKNFQPSLEEVEGLLVG-------KTKAVLINS 182 (389)
T ss_dssp HHC-CTTCEEEEEESCCTTHHHHH---------HHTTCEEEEEECCGGGTTCCCHHHHHHTCCT-------TEEEEEEES
T ss_pred HhC-CCCCEEEEcCCCchhHHHHH---------HHcCCEEEEEecCCccCCCCCHHHHHHhccc-------CceEEEEcC
Confidence 986 58999999887775543321 23478888888753 456899999999977 789999999
Q ss_pred ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh---------hhhc--ccCCeEEEecccccCc--ceeEEeecC
Q psy5413 213 THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---------AEVC--ASVDTVMFCLSKGLGA--PVGSILAGP 279 (285)
Q Consensus 213 ~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---------~~~~--~~~dv~~~s~sK~l~~--p~gg~~~~~ 279 (285)
|+||+ |.++|.+++++|+++|++||+++|+||+|+.+ ..+. .+.|+++.|+||+++. .+.|+++.+
T Consensus 183 p~npt-G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~ 261 (389)
T 1o4s_A 183 PNNPT-GVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISS 261 (389)
T ss_dssp SCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECC
T ss_pred CCCCC-CCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeC
Confidence 99999 89999999999999999999999999998722 1121 2457789999999974 456888888
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 262 ~~~~~ 266 (389)
T 1o4s_A 262 EKVAT 266 (389)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 12
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.91 E-value=2.7e-24 Score=197.85 Aligned_cols=204 Identities=19% Similarity=0.257 Sum_probs=151.5
Q ss_pred CCeeeeeccCCcCCCcHHHHHHHHhccc-CCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHcccc---C
Q psy5413 65 NIRTVDIRSDTISKPTMEMKNYMFNCEV-GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDR---R 140 (285)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~---~ 140 (285)
|+.++||.++.+. +.+.+++.+.+. +...|+..+...++++.++++++.+.+++++||++|++.++++++.. +
T Consensus 42 g~~ylD~~~~~~~---~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~ 118 (467)
T 1ax4_A 42 SAVYIDLLTDSGT---NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKE 118 (467)
T ss_dssp GGCSEECSCSSSC---CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred CceeeecccCcCC---HHHHHHHHHHHhhcccccccCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccC
Confidence 5678999777654 666666655533 34467777889999999999999999999999999999999998732 8
Q ss_pred CCe---EEecCCcceeeecccccccccccccccceeeeeeecC----------CCCCCCHHHHHHHhcccccccCCceEE
Q psy5413 141 DSE---IIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ----------KDGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 141 g~~---vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
||+ |+++ .+|..... ..+ ...|..++.++.. .++.+|+++|+++|+++. .+++++
T Consensus 119 Gd~~~~viv~-~~~~~~~~-~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~---~~~~~~ 186 (467)
T 1ax4_A 119 GKAKNPVFIS-NFHFDTTA-AHV-------ELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG---ADNIVA 186 (467)
T ss_dssp TCCSSCEEEE-SSCCHHHH-HHH-------HHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC---GGGEEE
T ss_pred CCccceEEEe-ccccchhh-HHH-------hccCCceecccccccccccccCCcccccCHHHHHHHHHhcC---CCCeeE
Confidence 998 8887 55522211 011 1224444433211 235689999999997521 126899
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC-----------------hhhhc----ccCCeEEEeccc
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP-----------------LAEVC----ASVDTVMFCLSK 266 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~-----------------~~~~~----~~~dv~~~s~sK 266 (285)
|++++++|++||.+++.+++++|+++|++||++||+||+|.. +..+. ..+|++++|+||
T Consensus 187 vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK 266 (467)
T 1ax4_A 187 IVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKK 266 (467)
T ss_dssp EEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTS
T ss_pred EEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccc
Confidence 999999999989999999999999999999999999998542 11111 357888999999
Q ss_pred ccCcceeEEeecC-c-ccc
Q psy5413 267 GLGAPVGSILAGP-E-EFI 283 (285)
Q Consensus 267 ~l~~p~gg~~~~~-~-~~i 283 (285)
+++.|.||+++++ + +++
T Consensus 267 ~~g~~~Gg~~~~~d~~~l~ 285 (467)
T 1ax4_A 267 DPLLNIGGLVAIRDNEEIF 285 (467)
T ss_dssp TTCCSSCEEEEESSCHHHH
T ss_pred cCCCCcceEEEeCCHHHHH
Confidence 9988888888876 6 654
No 13
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.91 E-value=5.8e-24 Score=191.24 Aligned_cols=200 Identities=18% Similarity=0.196 Sum_probs=157.5
Q ss_pred CCeeeeeccCCcCC--CcHHHHHHHHhcccC------CC--CccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK--PTMEMKNYMFNCEVG------DD--VYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~~~--~~~~v~~a~~~~~~~------~~--~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~ 134 (285)
|++++||.++++.+ ++|++.+++.+.... .. .++..+...++++.+++++|.+..+++++|++|+..+++
T Consensus 42 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~ 121 (399)
T 3tqx_A 42 EKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFE 121 (399)
T ss_dssp TEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHH
T ss_pred CeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHH
Confidence 67889999887643 688999998766542 11 234567789999999999999988999999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEeccc
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTH 214 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~ 214 (285)
+++ ++|+.|+++.++|..+..... ..|.+++.++. .|++++++++++... .+.++++|++++++
T Consensus 122 ~~~-~~gd~v~~~~~~~~~~~~~~~---------~~g~~~~~~~~-----~d~~~l~~~l~~~~~-~~~~~~~v~~~~~~ 185 (399)
T 3tqx_A 122 TLL-GPEDAIISDELNHASIIDGIR---------LCKAQRYRYKN-----NAMGDLEAKLKEADE-KGARFKLIATDGVF 185 (399)
T ss_dssp HHC-CTTCEEEEETTCCHHHHHHHH---------SCCSEEEEECT-----TCTTHHHHHHHHHHT-TTCSSEEEEEESEE
T ss_pred Hhc-CCCCEEEECCcccHHHHHHHH---------HcCCceeEeCC-----CCHHHHHHHHHhhhc-cCCCceEEEEeCCC
Confidence 877 689999999999877654322 33777777775 377889988876211 12268999999999
Q ss_pred CCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Ch--------hhh---cccCCeEEEecccccCcceeEEeecCccc
Q psy5413 215 NYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PL--------AEV---CASVDTVMFCLSKGLGAPVGSILAGPEEF 282 (285)
Q Consensus 215 n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~--------~~~---~~~~dv~~~s~sK~l~~p~gg~~~~~~~~ 282 (285)
||+ |.++| +++|+++|++||+++|+||+|. +. ... ....|+++.|+||+++|+.||++++++++
T Consensus 186 npt-G~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~~~ 261 (399)
T 3tqx_A 186 SMD-GIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGHKEI 261 (399)
T ss_dssp TTT-TEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECHHH
T ss_pred CCC-CCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcCHHH
Confidence 999 89999 9999999999999999999985 22 111 12568889999999997778999988876
Q ss_pred cc
Q psy5413 283 IQ 284 (285)
Q Consensus 283 i~ 284 (285)
++
T Consensus 262 ~~ 263 (399)
T 3tqx_A 262 IE 263 (399)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 14
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.91 E-value=7.8e-24 Score=189.74 Aligned_cols=200 Identities=16% Similarity=0.136 Sum_probs=157.9
Q ss_pred eeeeeccCCcCC-CcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccccCCCe
Q psy5413 67 RTVDIRSDTISK-PTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCDRRDSE 143 (285)
Q Consensus 67 ~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~~~g~~ 143 (285)
.+++|..+.+.. +++.+.+++.++......|.......++++.++++++.+ .+++++||++|+..++++++ .+|++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~ 104 (381)
T 1v2d_A 26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLV-GPGDE 104 (381)
T ss_dssp TCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHC-CTTCE
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC-CCCCE
Confidence 368888766654 678999999877654345665556889999999999874 57999999999999999986 58999
Q ss_pred EEecCCcceeeecccccccccccccccceeeeeeecC---CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCee
Q psy5413 144 IIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ---KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGT 220 (285)
Q Consensus 144 vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~ 220 (285)
|++++++|...... . ...|.+++.++.+ +++.+|+++|++++++ ++++|++++|+||+ |.
T Consensus 105 Vl~~~~~~~~~~~~---~------~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~~~npt-G~ 167 (381)
T 1v2d_A 105 VVVLEPFFDVYLPD---A------FLAGAKARLVRLDLTPEGFRLDLSALEKALTP-------RTRALLLNTPMNPT-GL 167 (381)
T ss_dssp EEEEESCCTTHHHH---H------HHTTCEEEEEECEEETTEEECCHHHHHTTCCT-------TEEEEEEESSCTTT-CC
T ss_pred EEEcCCCchhHHHH---H------HHcCCEEEEEeCCCCCccCCcCHHHHHHhcCc-------CCEEEEECCCCCCC-CC
Confidence 99988777554331 1 2347788888764 4466899999999976 78999999999999 89
Q ss_pred eCCHHHHHHHHHHHHHcCCeEEEeCccCChh------hh---cccCCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 221 VLPMQWLRELKARCQEHNIPVHMDGARLPLA------EV---CASVDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 221 ~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------~~---~~~~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
++|.+++++|+++|++||+++|+||+|+.+. .+ ..+.|+++.|+||+++. .+.|+++.++++++
T Consensus 168 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~ 242 (381)
T 1v2d_A 168 VFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMP 242 (381)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHH
T ss_pred ccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHH
Confidence 9999999999999999999999999987321 11 23567789999999874 45678888877654
No 15
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.91 E-value=1.2e-23 Score=189.40 Aligned_cols=200 Identities=15% Similarity=0.079 Sum_probs=155.1
Q ss_pred CeeeeeccCCcCC-CcHHHHHHHHhcccC-----CCCccCChhHHHHHHHHHhHc----C----CCcEEEcCChHHHHHH
Q psy5413 66 IRTVDIRSDTISK-PTMEMKNYMFNCEVG-----DDVYLEDPTCKELQEKAAKLA----G----KEAAIFVPSGTMGNLI 131 (285)
Q Consensus 66 ~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-----~~~y~~~~~~~~l~~~la~~~----g----~~~~~~~~~Gs~a~~~ 131 (285)
+.++||.++++.. +++++.+++.+.... ...|+......++++.+++++ | .+.+++++||++|+..
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~ 114 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSI 114 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHH
Confidence 5689999888764 678999998877653 245655555678888888875 2 3457999999999999
Q ss_pred HHHHccccCC-CeEEecCCcceeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEEEE
Q psy5413 132 AIMTHCDRRD-SEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSLVC 209 (285)
Q Consensus 132 al~~~~~~~g-~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 209 (285)
++++++ ++| |+|++..++|....... ...|.+++.++.++ ++.+|+++|++++++ ++++|+
T Consensus 115 ~~~~l~-~~g~d~vl~~~p~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------~~~~v~ 177 (398)
T 3ele_A 115 CFRALT-SDAYDEFITIAPYFPEYKVFV---------NAAGARLVEVPADTEHFQIDFDALEERINA-------HTRGVI 177 (398)
T ss_dssp HHHHHC-CSTTCEEEEESSCCTHHHHHH---------HHTTCEEEEECCCTTTSSCCHHHHHHTCCT-------TEEEEE
T ss_pred HHHHHc-CCCCCEEEEeCCCchhhHHHH---------HHcCCEEEEEecCCcCCcCCHHHHHHHhCc-------CCCEEE
Confidence 999987 689 99999888765443311 23488888888754 457899999999987 799999
Q ss_pred EecccCCCCeeeCCHHHHHHHHHHHHH------cCCeEEEeCccCChh-------hhcc--cCCeEEEecccccCc--ce
Q psy5413 210 VENTHNYCGGTVLPMQWLRELKARCQE------HNIPVHMDGARLPLA-------EVCA--SVDTVMFCLSKGLGA--PV 272 (285)
Q Consensus 210 i~~~~n~~gG~~~~~~~l~~i~~la~~------~gi~li~Dea~~~~~-------~~~~--~~dv~~~s~sK~l~~--p~ 272 (285)
+++|+||| |.+++.+++++|+++|++ ||+++|+||+|..+. .... ..++++.|+||+++. .+
T Consensus 178 ~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 256 (398)
T 3ele_A 178 INSPNNPS-GTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGER 256 (398)
T ss_dssp ECSSCTTT-CCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTC
T ss_pred EcCCCCCC-CCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccce
Confidence 99999999 899999999999999999 999999999987321 1112 223559999999873 55
Q ss_pred eEEeecCcccc
Q psy5413 273 GSILAGPEEFI 283 (285)
Q Consensus 273 gg~~~~~~~~i 283 (285)
.|+++.+++++
T Consensus 257 ~G~~~~~~~~~ 267 (398)
T 3ele_A 257 IGYVLVPDEVY 267 (398)
T ss_dssp CEEEECCTTST
T ss_pred eEEEEEcchhh
Confidence 67777777643
No 16
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.91 E-value=5.7e-24 Score=191.01 Aligned_cols=198 Identities=14% Similarity=0.037 Sum_probs=151.9
Q ss_pred eeeccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccccCCCeEEe
Q psy5413 69 VDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCDRRDSEIIV 146 (285)
Q Consensus 69 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~~~g~~vi~ 146 (285)
+.|.+..+...++++++++.+....+..+...+...++++.+++++|.+ .+++++||++|+..++++++ ++|++|++
T Consensus 10 ~yl~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~-~~gd~Vl~ 88 (392)
T 2z9v_A 10 VITLTAGPVNAYPEVLRGLGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLI-SPDDVVLN 88 (392)
T ss_dssp SEECSSSCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHC-CTTCCEEE
T ss_pred ceeecCCCcCCCHHHHHHHhccccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhc-CCCCEEEE
Confidence 4455556677899999999887654332333445789999999999875 57899999999999999986 58999999
Q ss_pred cCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHH
Q psy5413 147 GDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQW 226 (285)
Q Consensus 147 ~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~ 226 (285)
+.+.|.... ...+. ...|.+++.++.++++.+|+++|++++++ .+++++|++++++||+ |.++|
T Consensus 89 ~~~~~~~~~-~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-----~~~~~~v~~~~~~npt-G~~~~--- 152 (392)
T 2z9v_A 89 LASGVYGKG-FGYWA------KRYSPHLLEIEVPYNEAIDPQAVADMLKA-----HPEITVVSVCHHDTPS-GTINP--- 152 (392)
T ss_dssp EESSHHHHH-HHHHH------HHHCSCEEEEECCTTSCCCHHHHHHHHHH-----CTTCCEEEEESEEGGG-TEECC---
T ss_pred ecCCcccHH-HHHHH------HHcCCceEEeeCCCCCCCCHHHHHHHHhc-----CCCCcEEEEeccCCCC-ceecc---
Confidence 887765432 11222 23477888888766777999999999953 1168999999999999 89999
Q ss_pred HHHHHHHHHHcCCeEEEeCccC-Chh--hh-cccCCeEEEecccccCccee-EEeecCcccc
Q psy5413 227 LRELKARCQEHNIPVHMDGARL-PLA--EV-CASVDTVMFCLSKGLGAPVG-SILAGPEEFI 283 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea~~-~~~--~~-~~~~dv~~~s~sK~l~~p~g-g~~~~~~~~i 283 (285)
+++|+++|++||+++|+||+|+ +.. .. ..+.|+++.|+||+++++.| |+++.+++++
T Consensus 153 l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~ 214 (392)
T 2z9v_A 153 IDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAW 214 (392)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHH
Confidence 9999999999999999999987 111 11 12578999999998887433 7777777654
No 17
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.91 E-value=1.5e-23 Score=188.31 Aligned_cols=202 Identities=12% Similarity=0.077 Sum_probs=156.5
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHc----C----CCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLA----G----KEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~----g----~~~~~~~~~Gs~a~~~al~ 134 (285)
|+.+++|..+.+.. .++.+.+++.+.... ...|...+...++++.+++++ | .+.+++++||++|+..+++
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~ 108 (388)
T 1j32_A 29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLML 108 (388)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHH
Confidence 56788998877654 577899998876643 345665555788888888886 3 2457899999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
+++ ++|++|+++.+.|....... ...|.+++.++.++ ++.+|+++|++++++ ++++|++++
T Consensus 109 ~~~-~~gd~vl~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~ 171 (388)
T 1j32_A 109 AMI-EPGDEVIIPAPFWVSYPEMV---------KLAEGTPVILPTTVETQFKVSPEQIRQAITP-------KTKLLVFNT 171 (388)
T ss_dssp HHC-CTTCEEEEESSCCTHHHHHH---------HHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-------TEEEEEEES
T ss_pred Hhc-CCCCEEEEcCCCChhHHHHH---------HHcCCEEEEecCCcccCCCCCHHHHHHhcCc-------CceEEEEeC
Confidence 986 58999999888775543321 23477888888753 456899999999987 789999999
Q ss_pred ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----------hhhc---ccCCeEEEecccccCc--ceeEEee
Q psy5413 213 THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----------AEVC---ASVDTVMFCLSKGLGA--PVGSILA 277 (285)
Q Consensus 213 ~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----------~~~~---~~~dv~~~s~sK~l~~--p~gg~~~ 277 (285)
|+||+ |.++|.+++++|+++|++||+++|+||+|+.+ ..+. .+.++++.|+||+++. .+.|+++
T Consensus 172 p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 250 (388)
T 1j32_A 172 PSNPT-GMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA 250 (388)
T ss_dssp SCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred CCCCC-CcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEE
Confidence 99999 89999999999999999999999999998722 1111 2457789999999974 4467888
Q ss_pred cCccccc
Q psy5413 278 GPEEFIQ 284 (285)
Q Consensus 278 ~~~~~i~ 284 (285)
.++++++
T Consensus 251 ~~~~~~~ 257 (388)
T 1j32_A 251 GPVPLVK 257 (388)
T ss_dssp CCHHHHH
T ss_pred eCHHHHH
Confidence 8777653
No 18
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.91 E-value=1.6e-23 Score=188.03 Aligned_cols=200 Identities=15% Similarity=0.127 Sum_probs=155.3
Q ss_pred eeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHc----C----CCc-EEEcCChHHHHHHHHHH
Q psy5413 67 RTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLA----G----KEA-AIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 67 ~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~----g----~~~-~~~~~~Gs~a~~~al~~ 135 (285)
.+++|..+.+.. +++++.+++.+.... ...|.......++++.+++++ | .+. +++++||++|+..++++
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~ 106 (389)
T 1gd9_A 27 DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSA 106 (389)
T ss_dssp SCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTT
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHH
Confidence 568888776653 678999998877653 345665445788999999887 6 356 89999999999999999
Q ss_pred ccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 136 HCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 136 ~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
++ ++|++|+++.++|....... ...|.+++.++.++ ++.+|+++|++++++ ++++|++++|
T Consensus 107 ~~-~~gd~vl~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~~ 169 (389)
T 1gd9_A 107 FL-KDGEEVLIPTPAFVSYAPAV---------ILAGGKPVEVPTYEEDEFRLNVDELKKYVTD-------KTRALIINSP 169 (389)
T ss_dssp TC-CTTCEEEEEESCCTTHHHHH---------HHHTCEEEEEECCGGGTTCCCHHHHHHHCCT-------TEEEEEEESS
T ss_pred hC-CCCCEEEEcCCCchhHHHHH---------HHCCCEEEEeccCCccCCCCCHHHHHHhcCc-------CceEEEEECC
Confidence 86 58999999887775543322 23477888888754 356899999999976 7899999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc-----ccCCeEEEecccccCc--ceeEEeecC
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC-----ASVDTVMFCLSKGLGA--PVGSILAGP 279 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~-----~~~dv~~~s~sK~l~~--p~gg~~~~~ 279 (285)
+||+ |.+++.+++++|+++|++||+++|+||+|+... .+. ...|+++.|+||+++. .+.|+++.+
T Consensus 170 ~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 248 (389)
T 1gd9_A 170 CNPT-GAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP 248 (389)
T ss_dssp CTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECC
T ss_pred CCCC-CcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEEC
Confidence 9999 899999999999999999999999999988221 111 2346779999999974 445788887
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 249 ~~~~~ 253 (389)
T 1gd9_A 249 SWIIE 253 (389)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 19
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.91 E-value=2.1e-23 Score=188.06 Aligned_cols=200 Identities=19% Similarity=0.200 Sum_probs=155.1
Q ss_pred CCeeeeeccCCcCC--CcHHHHHHHHhcccC-CC-----Ccc--CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK--PTMEMKNYMFNCEVG-DD-----VYL--EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~~~--~~~~v~~a~~~~~~~-~~-----~y~--~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~ 134 (285)
|+.++||.++++.+ ++|++.+++.++... .. .|. ..+...++++.+++++|.+..+++++|++|+..+++
T Consensus 44 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~ 123 (401)
T 1fc4_A 44 GSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFE 123 (401)
T ss_dssp SCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHH
T ss_pred CccEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHH
Confidence 56789999887654 588999998876542 11 221 257789999999999998877899999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEeccc
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTH 214 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~ 214 (285)
+++ ++|+.|+++.++|....... ...|.+++.++. .|++++++++++..+ .+.++++|++++++
T Consensus 124 ~~~-~~gd~v~~~~~~~~~~~~~~---------~~~g~~~~~~~~-----~d~~~l~~~l~~~~~-~~~~~~~v~~~~~~ 187 (401)
T 1fc4_A 124 TLL-GAEDAIISDALNHASIIDGV---------RLCKAKRYRYAN-----NDMQELEARLKEARE-AGARHVLIATDGVF 187 (401)
T ss_dssp HHC-CTTCEEEEETTCCHHHHHHH---------HTSCSEEEEECT-----TCHHHHHHHHHHHHH-TTCSSEEEEEESEE
T ss_pred HHc-CCCCEEEEcchhHHHHHHHH---------HHcCCceEEECC-----CCHHHHHHHHHHhhc-cCCCceEEEEeCCc
Confidence 876 68999999998886554322 234777777763 489999999875211 11157999999999
Q ss_pred CCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chhh-----------hcccCCeEEEecccccCcceeEEeecCccc
Q psy5413 215 NYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLAE-----------VCASVDTVMFCLSKGLGAPVGSILAGPEEF 282 (285)
Q Consensus 215 n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~~-----------~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~ 282 (285)
||+ |.++| +++|.++|++||+++|+||+|. ++.. +..+.|+++.|+||+++++.||+++.++++
T Consensus 188 npt-G~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~~~~ 263 (401)
T 1fc4_A 188 SMD-GVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEV 263 (401)
T ss_dssp TTT-TEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECHHH
T ss_pred CCC-CCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEcCHHH
Confidence 999 89999 9999999999999999999995 4321 123468889999999956458999888876
Q ss_pred cc
Q psy5413 283 IQ 284 (285)
Q Consensus 283 i~ 284 (285)
++
T Consensus 264 ~~ 265 (401)
T 1fc4_A 264 VE 265 (401)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 20
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.91 E-value=8.6e-24 Score=190.76 Aligned_cols=200 Identities=17% Similarity=0.143 Sum_probs=153.2
Q ss_pred eeeeeccCCcC--CCcHHHHHHHHhcccCC--CCccC----ChhHHHHHHHHHhHcCC-----CcEEEcCChHHHHHHHH
Q psy5413 67 RTVDIRSDTIS--KPTMEMKNYMFNCEVGD--DVYLE----DPTCKELQEKAAKLAGK-----EAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 67 ~~~~~~~~~~~--~~~~~v~~a~~~~~~~~--~~y~~----~~~~~~l~~~la~~~g~-----~~~~~~~~Gs~a~~~al 133 (285)
.++||.++++. .++|++++++.++.... ..|.. .+...++++.+++++|. +.+++++||++|+..++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV 119 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 47999987766 47889999988776532 13433 23455666667777776 57899999999999999
Q ss_pred HHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeec------CCCCCCCHHHHHHHhcccccccCCceEE
Q psy5413 134 MTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN------QKDGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 134 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
++++ ++|++|+++.++|....... ...|.+++.++. ++++.+|+++|++++++ ++++
T Consensus 120 ~~l~-~~gd~vl~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~ 182 (407)
T 3nra_A 120 AATV-ARGDKVAIVQPDYFANRKLV---------EFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-------GARV 182 (407)
T ss_dssp HTTC-CTTCEEEEEESCCTHHHHHH---------HHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-------TCCE
T ss_pred HHhC-CCCCEEEEcCCcccchHHHH---------HHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-------CCcE
Confidence 9886 68999999888876544322 234788888887 35667899999999987 7899
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----------hhhc---ccCCeEEEecccccCc--ce
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----------AEVC---ASVDTVMFCLSKGLGA--PV 272 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----------~~~~---~~~dv~~~s~sK~l~~--p~ 272 (285)
|++++|+||+ |.++|.+++++|+++|++||+++|+||+|..+ ..+. ...++++.|+||+++. .+
T Consensus 183 v~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 261 (407)
T 3nra_A 183 FLFSNPNNPA-GVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYR 261 (407)
T ss_dssp EEEESSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGC
T ss_pred EEEcCCCCCC-CcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeee
Confidence 9999999999 89999999999999999999999999998721 1111 2233669999999873 55
Q ss_pred eEEeecCccccc
Q psy5413 273 GSILAGPEEFIQ 284 (285)
Q Consensus 273 gg~~~~~~~~i~ 284 (285)
.|++++++++++
T Consensus 262 ~G~~~~~~~~~~ 273 (407)
T 3nra_A 262 LGVAFGSRAIIA 273 (407)
T ss_dssp CEEEEECHHHHH
T ss_pred EEEEEcCHHHHH
Confidence 677877777653
No 21
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.90 E-value=3.6e-23 Score=185.50 Aligned_cols=196 Identities=17% Similarity=0.205 Sum_probs=154.4
Q ss_pred CCeeeeeccCCc-C-CCcHHHHHHHHhcccC------CCCc--cCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTI-S-KPTMEMKNYMFNCEVG------DDVY--LEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~-~-~~~~~v~~a~~~~~~~------~~~y--~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~ 134 (285)
|+.++||.++.+ + .+++++.+++.+.... ...| +..+...++++.+++++|.+..+++++|++|+..+++
T Consensus 38 g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~ 117 (384)
T 1bs0_A 38 DRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIA 117 (384)
T ss_dssp TEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHH
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHH
Confidence 567899998663 4 4788999998876542 1223 4457799999999999999888999999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEeccc
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTH 214 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~ 214 (285)
++. ++|+.|++++++|..+..... ..|.+++.+|. .|+++|++++++. .+++++|++++++
T Consensus 118 ~~~-~~gd~v~~~~~~~~~~~~~~~---------~~g~~~~~~~~-----~d~~~l~~~l~~~----~~~~~~v~~~~~~ 178 (384)
T 1bs0_A 118 AMM-AKEDRIAADRLSHASLLEAAS---------LSPSQLRRFAH-----NDVTHLARLLASP----CPGQQMVVTEGVF 178 (384)
T ss_dssp HHC-CTTCEEEEETTCCHHHHHHHH---------TSSSEEEEECT-----TCHHHHHHHHHSC----CSSCEEEEEESBC
T ss_pred HhC-CCCcEEEEcccccHHHHHHHH---------HcCCCEEEeCC-----CCHHHHHHHHHhc----CCCCeEEEEeCCC
Confidence 876 689999999999876544222 33778877774 4899999999762 2247899999999
Q ss_pred CCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh--------h-hcccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 215 NYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLA--------E-VCASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 215 n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~--------~-~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
||+ |.++| +++|+++|++||+++|+||+|. +.. . .....|+++.|+||+++ |.||++++++++++
T Consensus 179 npt-G~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~~~~~ 253 (384)
T 1bs0_A 179 SMD-GDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG-VSGAAVLCSSTVAD 253 (384)
T ss_dssp TTT-CCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS-SCCEEEEECHHHHH
T ss_pred CCC-CCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh-ccCcEEEeCHHHHH
Confidence 999 99999 9999999999999999999986 221 1 11347888999999998 56788888877654
No 22
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.90 E-value=1.4e-23 Score=187.14 Aligned_cols=200 Identities=15% Similarity=0.122 Sum_probs=157.2
Q ss_pred CeeeeeccCCcC-CCcHHHHHHHHhccc--CCCCccCChhHHHHHHHHHhHcCC---CcEEEcCChHHHHHHHHHHcccc
Q psy5413 66 IRTVDIRSDTIS-KPTMEMKNYMFNCEV--GDDVYLEDPTCKELQEKAAKLAGK---EAAIFVPSGTMGNLIAIMTHCDR 139 (285)
Q Consensus 66 ~~~~~~~~~~~~-~~~~~v~~a~~~~~~--~~~~y~~~~~~~~l~~~la~~~g~---~~~~~~~~Gs~a~~~al~~~~~~ 139 (285)
+.+++|.++... .++|++.+++.+... ....|.. +...++++.+++++|. +.+++++||++|+..++++++ +
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-~ 107 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAA-R 107 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTC-C
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHc-C
Confidence 467899865544 478899999987765 2445553 5689999999999998 567999999999999999986 6
Q ss_pred CCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCe
Q psy5413 140 RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGG 219 (285)
Q Consensus 140 ~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG 219 (285)
+|++|++..++|...... . ...|.+++.++.++++.+|+++|+++++++ ++++|++++|+||+ |
T Consensus 108 ~gd~Vl~~~~~~~~~~~~---~------~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~~v~~~~~~npt-G 171 (367)
T 3euc_A 108 PGAKVMAPVPGFVMYAMS---A------QFAGLEFVGVPLRADFTLDRGAMLAAMAEH------QPAIVYLAYPNNPT-G 171 (367)
T ss_dssp TTCEEEEEESCSCCSCHH---H------HTTTCEEEEEECCTTSCCCHHHHHHHHHHH------CCSEEEEESSCTTT-C
T ss_pred CCCEEEEcCCCHHHHHHH---H------HHcCCeEEEecCCCCCCCCHHHHHHHhhcc------CCCEEEEcCCCCCC-C
Confidence 899999988777554332 2 245889999998777789999999999763 68999999999999 8
Q ss_pred eeCCHHHHHHHHHHHHHc--CCeEEEeCccCCh-----hhhcc--cCCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 220 TVLPMQWLRELKARCQEH--NIPVHMDGARLPL-----AEVCA--SVDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 220 ~~~~~~~l~~i~~la~~~--gi~li~Dea~~~~-----~~~~~--~~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
.+++.+++++|+++|++| |+++|+||+|..+ ..... ..++++.|+||+ +. .+.|+++.++++++
T Consensus 172 ~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~ 246 (367)
T 3euc_A 172 NLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLE 246 (367)
T ss_dssp CCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHH
T ss_pred CCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeCHHHHH
Confidence 999999999999999999 9999999998832 11222 223558999998 44 45677777776653
No 23
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.90 E-value=4.8e-23 Score=186.87 Aligned_cols=202 Identities=17% Similarity=0.190 Sum_probs=155.1
Q ss_pred CCeeeeeccCCcCCCcHHHHHHHHhccc--CCC------Cc----cCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHH
Q psy5413 65 NIRTVDIRSDTISKPTMEMKNYMFNCEV--GDD------VY----LEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNL 130 (285)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~--~~~------~y----~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~ 130 (285)
+++++.|........++++.+++.++.. ... .+ ...+...++++.++++++.+ .+++++||++|++
T Consensus 20 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~ 99 (423)
T 3lvm_A 20 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDN 99 (423)
T ss_dssp CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHH
T ss_pred cCCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHH
Confidence 4556666666667789999999998776 211 11 12345689999999999987 6899999999999
Q ss_pred HHHHHccc---cCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEE
Q psy5413 131 IAIMTHCD---RRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 131 ~al~~~~~---~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
.+++++.. ++|++|+++.+.|.......... ...|.+++.++.++++.+|+++|++++++ ++++
T Consensus 100 ~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~ 166 (423)
T 3lvm_A 100 LAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQL------EREGFEVTYLAPQRNGIIDLKELEAAMRD-------DTIL 166 (423)
T ss_dssp HHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHH------HHTTCEEEEECCCTTSCCCHHHHHHHCCT-------TEEE
T ss_pred HHHHHHHHhhccCCCEEEECCccchHHHHHHHHH------HHcCCEEEEeccCCCCccCHHHHHHhcCC-------CcEE
Confidence 99998762 36899999888876543322111 23488888888877888999999999987 7899
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC-hh---hhcccCCeEEEecccccCcceeEEeecCcccc
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP-LA---EVCASVDTVMFCLSKGLGAPVGSILAGPEEFI 283 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~-~~---~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i 283 (285)
|++++++|++ |.++| +++|+++|++||++||+||+++. .. ....+.|++++|+||.++++..|+++.+++.+
T Consensus 167 v~~~~~~npt-G~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~ 242 (423)
T 3lvm_A 167 VSIMHVNNEI-GVVQD---IAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPR 242 (423)
T ss_dssp EECCSBCTTT-CBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTB
T ss_pred EEEeCCCCCC-ccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEecccc
Confidence 9999999999 99999 99999999999999999999882 11 11235789999999977764345666665544
No 24
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.90 E-value=1.2e-23 Score=188.27 Aligned_cols=202 Identities=13% Similarity=0.128 Sum_probs=155.8
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC--CCCccCChhHHHHHHHHHhHc----CCC-----cEEEcCChHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKAAKLA----GKE-----AAIFVPSGTMGNLIA 132 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~----g~~-----~~~~~~~Gs~a~~~a 132 (285)
|++++||..+.+.. ++|.+.+++.++... ...|...+...++++.+++++ |.+ .+++++||++|+..+
T Consensus 24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~ 103 (376)
T 2dou_A 24 GVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHL 103 (376)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHH
T ss_pred CCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHH
Confidence 56789998877654 578999999887643 345654456889999999987 753 679999999999999
Q ss_pred HHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 133 IMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 133 l~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
+++++ ++|++|++..++|....... ...|.+++.++..+.+.+|++++++++++ ++++|++++
T Consensus 104 ~~~l~-~~gd~vl~~~p~y~~~~~~~---------~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~~ 166 (376)
T 2dou_A 104 LLALT-EPEDLLLLPEVAYPSYFGAA---------RVASLRTFLIPLREDGLADLKAVPEGVWR-------EAKVLLLNY 166 (376)
T ss_dssp HHHHC-CTTCEEEEESSCCHHHHHHH---------HHTTCEEEEECBCTTSSBCGGGSCHHHHH-------HEEEEEECS
T ss_pred HHHhc-CCCCEEEECCCCcHhHHHHH---------HHcCCEEEEeeCCCCCCCCHHHHHHhhcc-------CceEEEECC
Confidence 99986 58999998877765443311 23477888887733445899999999976 789999999
Q ss_pred ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh------hhc-----ccCCeEEEecccccCc--ceeEEeecC
Q psy5413 213 THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA------EVC-----ASVDTVMFCLSKGLGA--PVGSILAGP 279 (285)
Q Consensus 213 ~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------~~~-----~~~dv~~~s~sK~l~~--p~gg~~~~~ 279 (285)
|+||+ |.++|.+++++|+++|++||+++|+||+|..+. ... ...++++.|+||+++. .+.|+++.+
T Consensus 167 p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 245 (376)
T 2dou_A 167 PNNPT-GAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS 245 (376)
T ss_dssp SCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC
T ss_pred CCCCc-CccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC
Confidence 99999 899999999999999999999999999987321 111 1234668999999863 456778887
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 246 ~~~~~ 250 (376)
T 2dou_A 246 EEALA 250 (376)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 25
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.90 E-value=3.2e-23 Score=186.07 Aligned_cols=200 Identities=16% Similarity=0.089 Sum_probs=155.9
Q ss_pred eeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHc----C----CC-cEEEcCChHHHHHHHHHH
Q psy5413 67 RTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLA----G----KE-AAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 67 ~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~----g----~~-~~~~~~~Gs~a~~~al~~ 135 (285)
.+++|..+.+.. +++.+.+++.+.... ...|.......++++.+++++ | .+ .+++++||++|+..++++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~ 110 (386)
T 1u08_A 31 QAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITA 110 (386)
T ss_dssp TCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHH
Confidence 468888877653 678999999877653 345665445788888888884 5 24 789999999999999999
Q ss_pred ccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEEEEEeccc
Q psy5413 136 HCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSLVCVENTH 214 (285)
Q Consensus 136 ~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~ 214 (285)
++ ++|++|++..+.|...... . ...|.+++.++.++ ++.+|+++|++++++ ++++|++++|+
T Consensus 111 ~~-~~gd~vl~~~p~~~~~~~~---~------~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~~p~ 173 (386)
T 1u08_A 111 LV-RNGDEVICFDPSYDSYAPA---I------ALSGGIVKRMALQPPHFRVDWQEFAALLSE-------RTRLVILNTPH 173 (386)
T ss_dssp HC-CTTCEEEEEESCCTTHHHH---H------HHTTCEEEEEECCTTTCCCCHHHHHHHCCT-------TEEEEEEESSC
T ss_pred hC-CCCCEEEEeCCCchhHHHH---H------HHcCCEEEEeecCcccCcCCHHHHHHhhcc-------cCEEEEEeCCC
Confidence 86 5899999987776544331 1 23478888888754 467899999999976 78999999999
Q ss_pred CCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC----------hhhh--cccCCeEEEecccccCc--ceeEEeecCc
Q psy5413 215 NYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP----------LAEV--CASVDTVMFCLSKGLGA--PVGSILAGPE 280 (285)
Q Consensus 215 n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~----------~~~~--~~~~dv~~~s~sK~l~~--p~gg~~~~~~ 280 (285)
||+ |.++|.+++++|+++|++||+++|+||+|.. +..+ ..+.++++.|+||+++. .+.|+++.++
T Consensus 174 npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 252 (386)
T 1u08_A 174 NPS-ATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA 252 (386)
T ss_dssp TTT-CCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH
T ss_pred CCC-CccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH
Confidence 999 8999999999999999999999999999872 1111 13467779999999974 4467888777
Q ss_pred cccc
Q psy5413 281 EFIQ 284 (285)
Q Consensus 281 ~~i~ 284 (285)
++++
T Consensus 253 ~~~~ 256 (386)
T 1u08_A 253 PISA 256 (386)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 26
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.90 E-value=4.4e-24 Score=196.45 Aligned_cols=213 Identities=12% Similarity=0.102 Sum_probs=146.4
Q ss_pred CC--eeeeeccC----CcCCCcHHHHHHHHhcccC--CC--CccCChhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHH
Q psy5413 65 NI--RTVDIRSD----TISKPTMEMKNYMFNCEVG--DD--VYLEDPTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIA 132 (285)
Q Consensus 65 ~~--~~~~~~~~----~~~~~~~~v~~a~~~~~~~--~~--~y~~~~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~a 132 (285)
|+ +++||.++ +.++++|++.+|+.+++.. +. .+..++...+|++.++++++ .+.++|++||++|++.|
T Consensus 72 G~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~A 151 (457)
T 3tfu_A 72 GQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVA 151 (457)
T ss_dssp TEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHH
T ss_pred CCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHH
Confidence 56 67777654 3456899999999887653 22 22356778999999999984 56789999999999999
Q ss_pred HHHcccc------CCC-eEEe-cCCcceeeeccccccc-ccccc-----cccceeeeeeecCCCCCCCHHHHHHHhcccc
Q psy5413 133 IMTHCDR------RDS-EIIV-GDCSHIMLWEQGGASQ-TSVYS-----QIGRVLMRGVTNQKDGTFDLDEMEAKFSTAD 198 (285)
Q Consensus 133 l~~~~~~------~g~-~vi~-~~~~h~~~~~~~~~~~-~~~~~-----~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~ 198 (285)
+++++.. +|+ .|++ ...||+.+.....+.. ...|. ...+...+.+|.......|+++|+++|++
T Consensus 152 lk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~-- 229 (457)
T 3tfu_A 152 AKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQ-- 229 (457)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHh--
Confidence 9998743 555 5554 5677776543222210 01111 11233333444322333589999999974
Q ss_pred cccCCceEEEEEec-ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcc----cCCeEEEeccccc
Q psy5413 199 NIHCASTSLVCVEN-THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCA----SVDTVMFCLSKGL 268 (285)
Q Consensus 199 ~~~~~~~~~v~i~~-~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~----~~dv~~~s~sK~l 268 (285)
+.+++++|++++ ++|++|..+.+.+++++|+++|++||++||+||+|+++.. ..+ ..| +.|++|++
T Consensus 230 --~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pd--iit~sK~l 305 (457)
T 3tfu_A 230 --HAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPD--IMCVGKAL 305 (457)
T ss_dssp --HGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS--EEEECGGG
T ss_pred --CCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCce--EEEEChhh
Confidence 223799999999 9999977777999999999999999999999999884321 112 234 44888999
Q ss_pred Cc--ceeEEeecCcccc
Q psy5413 269 GA--PVGSILAGPEEFI 283 (285)
Q Consensus 269 ~~--p~gg~~~~~~~~i 283 (285)
++ +..|+++++++++
T Consensus 306 ~gG~~~lG~v~~~~~i~ 322 (457)
T 3tfu_A 306 TGGYLSLAATLCTADVA 322 (457)
T ss_dssp GTTSSCCEEEEEEHHHH
T ss_pred hCCCcceEEEEEcHHHH
Confidence 88 3455666666654
No 27
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.90 E-value=4.8e-23 Score=185.65 Aligned_cols=197 Identities=21% Similarity=0.263 Sum_probs=154.9
Q ss_pred CCeeeeeccCCc-CC-CcHHHHHHHHhcccC----CCCc----cCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTI-SK-PTMEMKNYMFNCEVG----DDVY----LEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~-~~-~~~~v~~a~~~~~~~----~~~y----~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~ 134 (285)
|+.++||.++++ .. +++.+.+++.+.... ...| +..+...++++.+++++|.+.+++++||++|+..+++
T Consensus 42 g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~ 121 (398)
T 3a2b_A 42 GRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLS 121 (398)
T ss_dssp TEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHH
T ss_pred CceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH
Confidence 567899998876 54 788999998776542 1112 3456788999999999999989999999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEeccc
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTH 214 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~ 214 (285)
+++ ++|+.|++++++|..+..... ..|.+++.++. +|++++++++++... .++++|++++++
T Consensus 122 ~~~-~~gd~V~~~~p~~~~~~~~~~---------~~g~~~~~v~~-----~d~~~l~~~l~~~~~---~~~~~v~~~~~~ 183 (398)
T 3a2b_A 122 CLM-GRNDYILLDERDHASIIDGSR---------LSFSKVIKYGH-----NNMEDLRAKLSRLPE---DSAKLICTDGIF 183 (398)
T ss_dssp HSS-CTTCEEEEETTCCHHHHHHHH---------HSSSEEEEECT-----TCHHHHHHHHHTSCS---SSCEEEEEESBC
T ss_pred HHh-CCCCEEEECCccCHHHHHHHH---------HcCCceEEeCC-----CCHHHHHHHHHhhcc---CCceEEEEeCCC
Confidence 987 689999999999876654222 34778888775 489999999976211 168999999999
Q ss_pred CCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh-h-----hhc------ccCCeEEEecccccCcceeEEeecCccc
Q psy5413 215 NYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL-A-----EVC------ASVDTVMFCLSKGLGAPVGSILAGPEEF 282 (285)
Q Consensus 215 n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~-~-----~~~------~~~dv~~~s~sK~l~~p~gg~~~~~~~~ 282 (285)
||+ |.+.+ +++|+++|++||+++|+||+|... . ... +++|+++.|+||+++ |.||++++++++
T Consensus 184 npt-G~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~~~ 258 (398)
T 3a2b_A 184 SME-GDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDADV 258 (398)
T ss_dssp TTT-CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECHHH
T ss_pred CCC-CCccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCHHH
Confidence 999 89999 999999999999999999998621 1 111 236888999999998 456888888876
Q ss_pred cc
Q psy5413 283 IQ 284 (285)
Q Consensus 283 i~ 284 (285)
++
T Consensus 259 ~~ 260 (398)
T 3a2b_A 259 ID 260 (398)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 28
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.90 E-value=3.2e-23 Score=185.52 Aligned_cols=192 Identities=15% Similarity=0.087 Sum_probs=149.5
Q ss_pred eccCCcCCCcHHHHHHHHhcccCCCCcc--CChhHHHHHHHHHhHcCCC--c-EEEcCChHHHHHHHHHHccccCCCeEE
Q psy5413 71 IRSDTISKPTMEMKNYMFNCEVGDDVYL--EDPTCKELQEKAAKLAGKE--A-AIFVPSGTMGNLIAIMTHCDRRDSEII 145 (285)
Q Consensus 71 ~~~~~~~~~~~~v~~a~~~~~~~~~~y~--~~~~~~~l~~~la~~~g~~--~-~~~~~~Gs~a~~~al~~~~~~~g~~vi 145 (285)
+....+...++++.+++.+.... .|+ ..+...++++.+++++|.+ . +++++||++|+..++++++ ++|++|+
T Consensus 23 l~~~~~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~-~~gd~vl 99 (386)
T 2dr1_A 23 LFTAGPVACFPEVLEIMKVQMFS--HRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGV-SKGGKVL 99 (386)
T ss_dssp ECCSSSCCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHS-CTTCEEE
T ss_pred eecCCCcCCcHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhh-cCCCeEE
Confidence 34455566789999999877643 332 2456788999999999976 3 5899999999999999876 5899999
Q ss_pred ecCCccee--eecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCC
Q psy5413 146 VGDCSHIM--LWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLP 223 (285)
Q Consensus 146 ~~~~~h~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~ 223 (285)
++.++|.. ... .. ...|.+++.++.++++.+|+++|++++++ .+++++|++++++|++ |.+.|
T Consensus 100 ~~~~~~~~~~~~~---~~------~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-----~~~~~~v~~~~~~npt-G~~~~ 164 (386)
T 2dr1_A 100 VTIIGAFGKRYKE---VV------ESNGRKAVVLEYEPGKAVKPEDLDDALRK-----NPDVEAVTITYNETST-GVLNP 164 (386)
T ss_dssp EEESSHHHHHHHH---HH------HHTTCEEEEEECCTTCCCCHHHHHHHHHH-----CTTCCEEEEESEETTT-TEECC
T ss_pred EEcCCchhHHHHH---HH------HHhCCceEEEecCCCCCCCHHHHHHHHhc-----CCCCcEEEEEeecCCc-chhCC
Confidence 98887754 221 22 24488888888877777999999999953 1178999999999999 89999
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccCChh---hh-cccCCeEEEecccccCcce-eEEeecCcccc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARLPLA---EV-CASVDTVMFCLSKGLGAPV-GSILAGPEEFI 283 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~~~~---~~-~~~~dv~~~s~sK~l~~p~-gg~~~~~~~~i 283 (285)
+++|+++|++||+++|+||+|+... .+ ..+.|+++.|+||++++|. .|+++.+++++
T Consensus 165 ---l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~ 226 (386)
T 2dr1_A 165 ---LPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFL 226 (386)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHH
T ss_pred ---HHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHHH
Confidence 9999999999999999999988211 11 2357899999999999863 47887777664
No 29
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.90 E-value=1.9e-23 Score=186.70 Aligned_cols=198 Identities=17% Similarity=0.112 Sum_probs=151.1
Q ss_pred CCeeeeeccCCcC-CCcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHcC--------CCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTIS-KPTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLAG--------KEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~~-~~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~Gs~a~~~al~ 134 (285)
|++++||.++.+. .++|++.+++.++... ...|.. .. .++++.++++++ .+.+++++||++|+..+++
T Consensus 22 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~ 99 (377)
T 3fdb_A 22 GQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAID 99 (377)
T ss_dssp CTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHH
T ss_pred CCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHH
Confidence 5677899876554 4688999999887654 345654 44 778888888865 3467999999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEeccc
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTH 214 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~ 214 (285)
+++ ++|++|++..++|....... ...|.+++.++.+++ +|++++++++++ ++++|++++|+
T Consensus 100 ~~~-~~gd~vl~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~--~d~~~l~~~l~~-------~~~~v~i~~p~ 160 (377)
T 3fdb_A 100 HFT-PAQSKVIVPTPAYPPFFHLL---------SATQREGIFIDATGG--INLHDVEKGFQA-------GARSILLCNPY 160 (377)
T ss_dssp HHS-CTTCCEEEEESCCTHHHHHH---------HHHTCCEEEEECTTS--CCHHHHHHHHHT-------TCCEEEEESSB
T ss_pred Hhc-CCCCEEEEcCCCcHhHHHHH---------HHcCCEEEEccCCCC--CCHHHHHHHhcc-------CCCEEEEeCCC
Confidence 987 58999999887775543322 234888888887555 899999999987 68899999999
Q ss_pred CCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh--------hhc----ccCCeEEEecccccCc--ceeE-EeecC
Q psy5413 215 NYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA--------EVC----ASVDTVMFCLSKGLGA--PVGS-ILAGP 279 (285)
Q Consensus 215 n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~--------~~~----~~~dv~~~s~sK~l~~--p~gg-~~~~~ 279 (285)
||+ |.++|.+++++|+++|++||+++|+||+|..+. .+. ...++++.|+||+++. .+.| +++++
T Consensus 161 npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 239 (377)
T 3fdb_A 161 NPL-GMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN 239 (377)
T ss_dssp TTT-TBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS
T ss_pred CCC-CCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC
Confidence 999 899999999999999999999999999988321 111 1122568999999864 3445 45556
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 240 ~~~~~ 244 (377)
T 3fdb_A 240 PSDAE 244 (377)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 30
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.90 E-value=2.3e-23 Score=185.35 Aligned_cols=199 Identities=16% Similarity=0.182 Sum_probs=152.3
Q ss_pred CeeeeeccC-CcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCC--CcEEEcCChHHHHHHHHHHccccCCC
Q psy5413 66 IRTVDIRSD-TISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGK--EAAIFVPSGTMGNLIAIMTHCDRRDS 142 (285)
Q Consensus 66 ~~~~~~~~~-~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~--~~~~~~~~Gs~a~~~al~~~~~~~g~ 142 (285)
+++++|.++ ++..++|++.+++.+.......|. ++...++++.++++++. +.+++++||++|+..++++++ ++|+
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~-~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~-~~gd 109 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSSVETEIYP-DGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLL-DTTT 109 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC-----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC-STTC
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHHHhhcCC-CcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHc-cCCC
Confidence 467999876 444478899999998775544553 56678999999999986 457999999999999999986 6899
Q ss_pred eEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeC
Q psy5413 143 EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVL 222 (285)
Q Consensus 143 ~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~ 222 (285)
+|+++.++|....... ...|.+++.++.++++.+|++++++++++ ++++|++++|+||+ |.++
T Consensus 110 ~vl~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~p~npt-G~~~ 172 (363)
T 3ffh_A 110 NTVMATPTFVQYRQNA---------LIEGAEVREIPLLQDGEHDLEGMLNAIDE-------KTTIVWICNPNNPT-GNYI 172 (363)
T ss_dssp EEEEEESSCHHHHHHH---------HHHTCEEEEEECCTTSCCCHHHHHHHCCT-------TEEEEEEESSCTTT-CCCC
T ss_pred EEEEcCCChHHHHHHH---------HHcCCEEEEecCCCCCCcCHHHHHHhccc-------CCCEEEEeCCCCCc-CCCc
Confidence 9999887765543322 23488889998876788999999999987 79999999999999 8999
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccCChh--------hhcccC--CeEEEecccccCc--ceeEEeecCccccc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARLPLA--------EVCASV--DTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~~~~--------~~~~~~--dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
|.+++.+|++.|++ |+++|+||+|+.+. ...... .+++.|+||+++. .+.|+++.++++++
T Consensus 173 ~~~~l~~l~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 245 (363)
T 3ffh_A 173 ELADIQAFLDRVPS-DVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIR 245 (363)
T ss_dssp CHHHHHHHHTTSCT-TSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHH
T ss_pred CHHHHHHHHHhCCC-CcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHH
Confidence 97777777777766 99999999988221 111112 2458999999874 44577777777653
No 31
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.90 E-value=2.9e-23 Score=188.05 Aligned_cols=203 Identities=12% Similarity=0.090 Sum_probs=152.8
Q ss_pred cCCeeeeeccCCcCC-CcHHHHHHHHhcccC--CCCccCChhHHHHHHHHHhHc----CC-----CcEEEcCChHHHHHH
Q psy5413 64 VNIRTVDIRSDTISK-PTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKAAKLA----GK-----EAAIFVPSGTMGNLI 131 (285)
Q Consensus 64 ~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~----g~-----~~~~~~~~Gs~a~~~ 131 (285)
.|++++||.++.+.. ++|.+.+++.++... ...|+..+...++++.+++++ |. +.+++++||++|+..
T Consensus 35 ~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~ 114 (412)
T 2x5d_A 35 RGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAH 114 (412)
T ss_dssp TTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHH
T ss_pred cCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHH
Confidence 366789999877654 678999999887653 235665566789999999988 63 468999999999999
Q ss_pred HHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCC--CCCCHHHHHHHhcccccccCCceEEEE
Q psy5413 132 AIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKD--GTFDLDEMEAKFSTADNIHCASTSLVC 209 (285)
Q Consensus 132 al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~ 209 (285)
++++++ ++|++|++..++|....... ...|.+++.++.+++ +.+|+++|++++++ ++++|+
T Consensus 115 ~~~~~~-~~gd~Vl~~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~v~ 177 (412)
T 2x5d_A 115 LMLATL-DHGDTILVPNPSYPIHIYGA---------VIAGAQVRSVPLVPGIDFFNELERAIRESIP-------KPRMMI 177 (412)
T ss_dssp HHHHHC-CTTCEEEEEESCCHHHHHHH---------HHHTCEEEEEECSTTSCHHHHHHHHHHTEES-------CCSEEE
T ss_pred HHHHhC-CCCCEEEEcCCCchhHHHHH---------HHcCCEEEEeecCCccCCCCCHHHHHHhccc-------CceEEE
Confidence 999986 58999999877765443311 234778888887543 23688999999976 789999
Q ss_pred EecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----------hhc--ccCCeEEEecccccCc--ceeEE
Q psy5413 210 VENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----------EVC--ASVDTVMFCLSKGLGA--PVGSI 275 (285)
Q Consensus 210 i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----------~~~--~~~dv~~~s~sK~l~~--p~gg~ 275 (285)
+++|+||+ |.++|.+++++|+++|++||+++|+||+|..+. .+. .+.++++.|+||+++. .+.|+
T Consensus 178 l~~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (412)
T 2x5d_A 178 LGFPSNPT-AQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGF 256 (412)
T ss_dssp EESSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEE
T ss_pred ECCCCCCC-CCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEE
Confidence 99999999 899999999999999999999999999987321 111 2445779999999973 45677
Q ss_pred eecCccccc
Q psy5413 276 LAGPEEFIQ 284 (285)
Q Consensus 276 ~~~~~~~i~ 284 (285)
+++++++++
T Consensus 257 ~~~~~~~~~ 265 (412)
T 2x5d_A 257 MVGNPELVS 265 (412)
T ss_dssp EEECHHHHH
T ss_pred EEcCHHHHH
Confidence 777777654
No 32
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.90 E-value=1.6e-23 Score=188.51 Aligned_cols=202 Identities=19% Similarity=0.203 Sum_probs=155.8
Q ss_pred CCeeeeeccCCcCCCcHHHHHHHHhcccCC----CC------ccCChhHHHHHHHHHhHcCC---CcEEEcCChHHHHHH
Q psy5413 65 NIRTVDIRSDTISKPTMEMKNYMFNCEVGD----DV------YLEDPTCKELQEKAAKLAGK---EAAIFVPSGTMGNLI 131 (285)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~----~~------y~~~~~~~~l~~~la~~~g~---~~~~~~~~Gs~a~~~ 131 (285)
|+.+++|.....+..++++.+++.++.... .. |...+...++++.++++++. +.+++++||++|+..
T Consensus 21 g~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~ 100 (406)
T 1kmj_A 21 GLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL 100 (406)
T ss_dssp TEECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred CCceEEecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHH
Confidence 345677877777777889999988766421 11 12356688999999999987 457999999999999
Q ss_pred HHHHc----cccCCCeEEecCCcceeeec-ccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 132 AIMTH----CDRRDSEIIVGDCSHIMLWE-QGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 132 al~~~----~~~~g~~vi~~~~~h~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
+++++ + ++|++|+++.+.|..... ..... ...|.+++.++.++++.+|+++|++++++ +++
T Consensus 101 ~~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~ 166 (406)
T 1kmj_A 101 VANSWGNSNV-RAGDNIIISQMEHHANIVPWQMLC------ARVGAELRVIPLNPDGTLQLETLPTLFDE-------KTR 166 (406)
T ss_dssp HHHHTHHHHC-CTTCEEEEETTCCGGGTHHHHHHH------HHHTCEEEEECBCTTSCBCGGGHHHHCCT-------TEE
T ss_pred HHHHhhhhcC-CCCCEEEEecccchHHHHHHHHHH------HhCCCEEEEEecCCCCCcCHHHHHHHhcc-------CCe
Confidence 99998 5 589999998887754321 11112 23477888888766777899999999987 789
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC-hh--hh-cccCCeEEEecccccCcceeEEeecCccc
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP-LA--EV-CASVDTVMFCLSKGLGAPVGSILAGPEEF 282 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~-~~--~~-~~~~dv~~~s~sK~l~~p~gg~~~~~~~~ 282 (285)
+|++++++|++ |.++| +++|+++|++||+++|+||+|+. .. .. ..+.|+++.|+||.++++..|+++.++++
T Consensus 167 ~v~~~~~~npt-G~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~~~ 242 (406)
T 1kmj_A 167 LLAITHVSNVL-GTENP---LAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEAL 242 (406)
T ss_dssp EEEEESBCTTT-CCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHH
T ss_pred EEEEeCCCccc-cCcCC---HHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeHHH
Confidence 99999999999 89999 99999999999999999999882 11 11 13678999999999865323777777766
Q ss_pred cc
Q psy5413 283 IQ 284 (285)
Q Consensus 283 i~ 284 (285)
++
T Consensus 243 ~~ 244 (406)
T 1kmj_A 243 LQ 244 (406)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 33
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.90 E-value=1.4e-22 Score=179.37 Aligned_cols=207 Identities=22% Similarity=0.296 Sum_probs=159.9
Q ss_pred CeeeeeccCCcCCCcHHHHHHHHhcccCC-CCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccccCCC
Q psy5413 66 IRTVDIRSDTISKPTMEMKNYMFNCEVGD-DVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCDRRDS 142 (285)
Q Consensus 66 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~-~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~~~g~ 142 (285)
+.+++|.++..+.+++++.+++.++...+ ..++..+...++++.+++++|.+ .+++++||++|++.++++++ ++|+
T Consensus 13 p~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~-~~gd 91 (359)
T 1svv_A 13 PKPYSFVNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLAL-RPWE 91 (359)
T ss_dssp --CEECSCSCSSCCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHC-CTTE
T ss_pred CeeEEecCCCcCCCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHh-CCCC
Confidence 45788988777788999999999877542 33445677899999999998865 36899999999999999987 5899
Q ss_pred eEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeC
Q psy5413 143 EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVL 222 (285)
Q Consensus 143 ~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~ 222 (285)
+|++++++|....... .. ...|.+++.++.+ ++.+|+++|+++++++.+.++.++++|+++++ |++ |.++
T Consensus 92 ~vl~~~~~~~~~~~~~-~~------~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~pt-G~~~ 161 (359)
T 1svv_A 92 AVIATQLGHISTHETG-AI------EATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEV-GTQY 161 (359)
T ss_dssp EEEEETTSHHHHSSTT-HH------HHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTT-SCCC
T ss_pred EEEEcccchHHHHHHH-HH------hcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCC-ceec
Confidence 9999988886654321 11 2457888888874 67799999999997721222335899999999 677 8999
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccC----Chhh-------hcccCCeEEEecccccCccee-EEeecCccccc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARL----PLAE-------VCASVDTVMFCLSKGLGAPVG-SILAGPEEFIQ 284 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~----~~~~-------~~~~~dv~~~s~sK~l~~p~g-g~~~~~~~~i~ 284 (285)
|.+++++|+++|++||+++|+||+|. +... +....|+++++++|+ ++|.| |+++.++++++
T Consensus 162 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~~~~~ 234 (359)
T 1svv_A 162 TKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFGEALIILNDALKP 234 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSGGGCT
T ss_pred CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEcccHHH
Confidence 99999999999999999999999983 1111 114678899999997 44555 78888888765
No 34
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.9e-23 Score=191.50 Aligned_cols=202 Identities=17% Similarity=0.116 Sum_probs=156.0
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC--CCCccCChhHHHHHHHHHhHc----CC----CcEEEcCChHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKAAKLA----GK----EAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~----g~----~~~~~~~~Gs~a~~~al 133 (285)
++.+++|..+.+.. +++.+.+++.++... ...|.......++++.+++++ |. +.+++++||++|+..++
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~ 135 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCL 135 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence 46789999887654 567999999877653 245665555778999998886 32 35789999999999999
Q ss_pred HHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC------------CCCCCHHHHHHHhccccccc
Q psy5413 134 MTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK------------DGTFDLDEMEAKFSTADNIH 201 (285)
Q Consensus 134 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~d~~~l~~~i~~~~~~~ 201 (285)
++++ .+||+|++..++|....... ...|.+++.++..+ ++.+|+++|++++++
T Consensus 136 ~~l~-~~gd~Vlv~~p~y~~~~~~~---------~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 200 (447)
T 3b46_A 136 MGLL-NAGDEVIVFEPFFDQYIPNI---------ELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS----- 200 (447)
T ss_dssp HHHC-CTTCEEEEEESCCTTHHHHH---------HHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT-----
T ss_pred HHHc-CCCCEEEEeCCCchhHHHHH---------HHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc-----
Confidence 9987 58999999877765443321 23477777777533 346899999999976
Q ss_pred CCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh---------hhh---cccCCeEEEecccccC
Q psy5413 202 CASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---------AEV---CASVDTVMFCLSKGLG 269 (285)
Q Consensus 202 ~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---------~~~---~~~~dv~~~s~sK~l~ 269 (285)
++++|++++|+||+ |.+++.+++++|+++|++||+++|+||+|..+ ..+ ..+.++++.|+||+++
T Consensus 201 --~~~~v~l~~p~npt-G~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~ 277 (447)
T 3b46_A 201 --KTKAVIINTPHNPI-GKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFA 277 (447)
T ss_dssp --TEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTT
T ss_pred --CCeEEEEeCCCCCC-CcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcC
Confidence 79999999999999 89999999999999999999999999998731 111 1245677999999997
Q ss_pred c--ceeEEeec-Cccccc
Q psy5413 270 A--PVGSILAG-PEEFIQ 284 (285)
Q Consensus 270 ~--p~gg~~~~-~~~~i~ 284 (285)
+ .+.|++++ ++++++
T Consensus 278 ~~G~riG~~~~~~~~l~~ 295 (447)
T 3b46_A 278 ATGWRIGWVLSLNAELLS 295 (447)
T ss_dssp CTTSCCEEEECSCHHHHH
T ss_pred CcchhhEEEEeCCHHHHH
Confidence 4 55678887 777654
No 35
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.90 E-value=2.2e-23 Score=187.56 Aligned_cols=202 Identities=13% Similarity=0.059 Sum_probs=153.4
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHc----C-----CC-cEEEcCChHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLA----G-----KE-AAIFVPSGTMGNLIAI 133 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~----g-----~~-~~~~~~~Gs~a~~~al 133 (285)
|+++++|.++.+.. .+|.+.+++.++......|.......++++.+++++ | .+ .+++++||++|+..++
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~ 108 (396)
T 3jtx_A 29 GMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFV 108 (396)
T ss_dssp TCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHH
T ss_pred CCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHH
Confidence 67889999877665 577999999887754455654444667777777764 4 34 7899999999999999
Q ss_pred HHccccCC-----CeEEecCCcceeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEE
Q psy5413 134 MTHCDRRD-----SEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 134 ~~~~~~~g-----~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
++++ ++| ++|+++.++|...... . ...|.+++.++.++ .+.+|++++++++++ ++++
T Consensus 109 ~~~~-~~g~~~~~d~vl~~~p~~~~~~~~---~------~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~-------~~~~ 171 (396)
T 3jtx_A 109 QTVL-NPVSDGIKPAIVSPNPFYQIYEGA---T------LLGGGEIHFANCPAPSFNPDWRSISEEVWK-------RTKL 171 (396)
T ss_dssp HHHC-CC---CCCCEEEEEESCCHHHHHH---H------HHTTCEEEEEECCTTTCCCCGGGSCHHHHH-------TEEE
T ss_pred HHHh-CCCCccCCCEEEEcCCCcHhHHHH---H------HHcCCEEEEeecCCCCCccCHHHHHHhhcc-------CcEE
Confidence 9987 575 6888887776544331 1 23488888888743 345799999999987 7999
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc---------ccCCeEEEecccccCc-
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC---------ASVDTVMFCLSKGLGA- 270 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~---------~~~dv~~~s~sK~l~~- 270 (285)
|++++|+||+ |.+++.+++++|+++|++||+++|+||+|..+. ... ...++++.|+||.++.
T Consensus 172 v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 250 (396)
T 3jtx_A 172 VFVCSPNNPS-GSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVP 250 (396)
T ss_dssp EEEESSCTTT-CCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCG
T ss_pred EEEECCCCCC-CCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCc
Confidence 9999999999 899999999999999999999999999988211 110 2334669999997654
Q ss_pred -ceeEEeecCccccc
Q psy5413 271 -PVGSILAGPEEFIQ 284 (285)
Q Consensus 271 -p~gg~~~~~~~~i~ 284 (285)
.+.|++++++++++
T Consensus 251 G~r~G~~~~~~~~~~ 265 (396)
T 3jtx_A 251 GLRSGFVAGDAELLK 265 (396)
T ss_dssp GGCCEEEEECHHHHH
T ss_pred ccceEEEEeCHHHHH
Confidence 55677888777654
No 36
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.90 E-value=3e-23 Score=188.87 Aligned_cols=200 Identities=15% Similarity=0.117 Sum_probs=153.4
Q ss_pred eeeeeccCCcC-CCcHHHHHHHHhcccC----CCCccCChhHHHHHHHHHhHc----C----CC-cEEEcCChHHHHHHH
Q psy5413 67 RTVDIRSDTIS-KPTMEMKNYMFNCEVG----DDVYLEDPTCKELQEKAAKLA----G----KE-AAIFVPSGTMGNLIA 132 (285)
Q Consensus 67 ~~~~~~~~~~~-~~~~~v~~a~~~~~~~----~~~y~~~~~~~~l~~~la~~~----g----~~-~~~~~~~Gs~a~~~a 132 (285)
.+++|.++.+. .+++.+.+++.++... ...|.......++++.+++++ | .+ .+++++||++|+..+
T Consensus 38 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~ 117 (429)
T 1yiz_A 38 KPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYAT 117 (429)
T ss_dssp CCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHH
Confidence 57899887665 4678999999877653 235554445678888888885 5 34 689999999999999
Q ss_pred HHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC----------CCCCCHHHHHHHhcccccccC
Q psy5413 133 IMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK----------DGTFDLDEMEAKFSTADNIHC 202 (285)
Q Consensus 133 l~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~d~~~l~~~i~~~~~~~~ 202 (285)
+++++ ++|++|++..++|....... ...|.+++.++.++ ++.+|+++|++++++
T Consensus 118 ~~~~~-~~gd~Vl~~~p~y~~~~~~~---------~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------ 181 (429)
T 1yiz_A 118 IQGHV-DEGDEVIIIEPFFDCYEPMV---------KAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE------ 181 (429)
T ss_dssp HHHHC-CTTCEEEEEESCCTTHHHHH---------HHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT------
T ss_pred HHHhc-CCCCEEEEcCCCchhHHHHH---------HHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhcc------
Confidence 99987 58999998877664433211 23477888887644 346899999999976
Q ss_pred CceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----------hhh--cccCCeEEEecccccCc
Q psy5413 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----------AEV--CASVDTVMFCLSKGLGA 270 (285)
Q Consensus 203 ~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----------~~~--~~~~dv~~~s~sK~l~~ 270 (285)
++++|++++|+||+ |.++|.+++++|+++|++||+++|+||+|+.+ ..+ ..+.|+++.|+||++++
T Consensus 182 -~~~~v~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~ 259 (429)
T 1yiz_A 182 -KTKMIIINTPHNPL-GKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSL 259 (429)
T ss_dssp -TEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTC
T ss_pred -CceEEEECCCCCCC-CccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCC
Confidence 78999999999999 89999999999999999999999999998721 111 12456779999999874
Q ss_pred --ceeEEeecCccccc
Q psy5413 271 --PVGSILAGPEEFIQ 284 (285)
Q Consensus 271 --p~gg~~~~~~~~i~ 284 (285)
.+.|++++++++++
T Consensus 260 ~G~r~G~~~~~~~~~~ 275 (429)
T 1yiz_A 260 TGWKIGWAYGPEALLK 275 (429)
T ss_dssp GGGCCEEEESCHHHHH
T ss_pred CCcceEEEEeCHHHHH
Confidence 44577777777654
No 37
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.90 E-value=5.2e-23 Score=184.90 Aligned_cols=202 Identities=17% Similarity=0.119 Sum_probs=154.4
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHc----CC----CcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLA----GK----EAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~----g~----~~~~~~~~Gs~a~~~al~ 134 (285)
++.+++|..+.+.. .++.+.+++.+.... ...|.......++++.+++++ |. +.+++++||++|+..+++
T Consensus 30 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~ 109 (385)
T 1b5p_A 30 GVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQ 109 (385)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHH
Confidence 34568888777654 467888888766542 345654455788999998886 32 457899999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
+++ ++||+|+++.++|..... .. ...|.+++.++.++ ++.+|+++|++++++ ++++|++++
T Consensus 110 ~l~-~~gd~Vlv~~p~y~~~~~---~~------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~ 172 (385)
T 1b5p_A 110 AIL-DPGDEVIVLSPYWVSYPE---MV------RFAGGVVVEVETLPEEGFVPDPERVRRAITP-------RTKALVVNS 172 (385)
T ss_dssp HHC-CTTCEEEEEESCCTHHHH---HH------HHTTCEEEEEECCGGGTTCCCHHHHHTTCCT-------TEEEEEEES
T ss_pred Hhc-CCCCEEEEcCCCchhHHH---HH------HHcCCEEEEeecCcccCCCCCHHHHHHhcCC-------CCEEEEEeC
Confidence 987 589999998887754433 11 23488888888753 456899999999976 789999999
Q ss_pred ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh------hhc---ccCCeEEEecccccCc--ceeEEeecCcc
Q psy5413 213 THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA------EVC---ASVDTVMFCLSKGLGA--PVGSILAGPEE 281 (285)
Q Consensus 213 ~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------~~~---~~~dv~~~s~sK~l~~--p~gg~~~~~~~ 281 (285)
|+||| |.+++.+++++|+++|++||+++|+||+|..+. .+. ...++++.|+||.++. .+.|+++.+++
T Consensus 173 p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~ 251 (385)
T 1b5p_A 173 PNNPT-GAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE 251 (385)
T ss_dssp SCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHH
T ss_pred CCCCC-CCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHH
Confidence 99999 899999999999999999999999999987321 111 1234569999999874 55788888877
Q ss_pred ccc
Q psy5413 282 FIQ 284 (285)
Q Consensus 282 ~i~ 284 (285)
+++
T Consensus 252 ~~~ 254 (385)
T 1b5p_A 252 VIK 254 (385)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 38
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.90 E-value=5.3e-23 Score=187.52 Aligned_cols=211 Identities=14% Similarity=0.051 Sum_probs=143.9
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCC-CCccCChhHHHHHHHHHhHc-CCCcEEEcCChHHHHHHHHHHccc
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGD-DVYLEDPTCKELQEKAAKLA-GKEAAIFVPSGTMGNLIAIMTHCD 138 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~-~~y~~~~~~~~l~~~la~~~-g~~~~~~~~~Gs~a~~~al~~~~~ 138 (285)
|++++||.++. .++.+|++.+|+.+++... ..+.+++...+|++.+++++ +.+.++|++||++|++.+++++..
T Consensus 52 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~ 131 (429)
T 3k28_A 52 GNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARG 131 (429)
T ss_dssp CCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHH
Confidence 67788887654 3447999999998876532 23345778999999999998 567789999999999999998764
Q ss_pred cC-CCeEEe-cCCcceeeeccccccccccc----ccc------cceeeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 139 RR-DSEIIV-GDCSHIMLWEQGGASQTSVY----SQI------GRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 139 ~~-g~~vi~-~~~~h~~~~~~~~~~~~~~~----~~~------~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
.+ ++.|++ ...+|+.+...........+ ... .+..++.++. .|+++|++++++ +.++++
T Consensus 132 ~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~----~~~~~~ 202 (429)
T 3k28_A 132 YTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAY-----NDLESVKYAFEQ----FGDDIA 202 (429)
T ss_dssp HHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEET-----TCHHHHHHHHHH----HGGGEE
T ss_pred hhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCC-----CCHHHHHHHHHh----CCCCEE
Confidence 33 455655 56677665432222100000 000 0012222332 289999999975 223789
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----hhhcccCCeE--EEecccccCc-ceeEEeecC
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----AEVCASVDTV--MFCLSKGLGA-PVGSILAGP 279 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----~~~~~~~dv~--~~s~sK~l~~-p~gg~~~~~ 279 (285)
+|+++++++++|....+.+++++|+++|++||++||+||+|+++ ....+..++. +.++||++++ .+.|+++++
T Consensus 203 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~iG~~~~~ 282 (429)
T 3k28_A 203 CVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLTCLGKVIGGGLPVGAYGGK 282 (429)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEEEECGGGGTTSCCEEEEEC
T ss_pred EEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCceehhhhhhcCCCCeEEEEEc
Confidence 99999999887555667899999999999999999999999854 1111112221 5678899976 445567777
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 283 ~~~~~ 287 (429)
T 3k28_A 283 AEIMR 287 (429)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77664
No 39
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.90 E-value=4.6e-23 Score=186.72 Aligned_cols=187 Identities=18% Similarity=0.192 Sum_probs=149.6
Q ss_pred cHHHHHHHHhcccC------CCCcc-CChhHHHHHHHHHhHcCCCcEEE---cCChHHHHHHHHHHccccCCCeEEecC-
Q psy5413 80 TMEMKNYMFNCEVG------DDVYL-EDPTCKELQEKAAKLAGKEAAIF---VPSGTMGNLIAIMTHCDRRDSEIIVGD- 148 (285)
Q Consensus 80 ~~~v~~a~~~~~~~------~~~y~-~~~~~~~l~~~la~~~g~~~~~~---~~~Gs~a~~~al~~~~~~~g~~vi~~~- 148 (285)
+.+|++++.+.... ...|. ..+...+|++.+++++|.+.+++ ++||++|+..++.+++ ++||+|+++.
T Consensus 31 ~~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all-~~GD~Vl~~~~ 109 (409)
T 3jzl_A 31 QAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGIL-RPDDELLYITG 109 (409)
T ss_dssp HHHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHC-CTTCEEEECSS
T ss_pred HHHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhc-CCCCEEEEeCC
Confidence 56788888875422 12222 35668899999999999998877 8999999999999877 6999999886
Q ss_pred Ccceeeeccc-------ccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEec----ccCCC
Q psy5413 149 CSHIMLWEQG-------GASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVEN----THNYC 217 (285)
Q Consensus 149 ~~h~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~----~~n~~ 217 (285)
+.|..+.... ... ...|.+++.++.++++.+|++++++++++ ++++|++++ |+|++
T Consensus 110 ~~y~~~~~~~~~~g~~~~~l------~~~G~~~~~v~~~~~g~~d~e~l~~ai~~-------~tklV~i~~s~g~p~npt 176 (409)
T 3jzl_A 110 QPYDTLEEIVGIRKQGQGSL------KDFHIGYSSVPLLENGDVDFPRIAKKMTP-------KTKMIGIQRSRGYADRPS 176 (409)
T ss_dssp SCCTTHHHHHTSSSSSSSCT------GGGTCEEEECCCCTTSCCCHHHHHHHCCT-------TEEEEEEECSCTTSSSCC
T ss_pred CCcHhHHHHHhcccchhhHH------HHcCCEEEEeCCCCCCCcCHHHHHHhccC-------CCeEEEEECCCCCCCCCc
Confidence 6554433211 111 34588888998877888999999999987 899999999 99999
Q ss_pred CeeeCCHHHHHHHHHHHHH--cCCeEEEeCccCChh----hhcccCCeEEEecccccCc---ceeEEeecCccccc
Q psy5413 218 GGTVLPMQWLRELKARCQE--HNIPVHMDGARLPLA----EVCASVDTVMFCLSKGLGA---PVGSILAGPEEFIQ 284 (285)
Q Consensus 218 gG~~~~~~~l~~i~~la~~--~gi~li~Dea~~~~~----~~~~~~dv~~~s~sK~l~~---p~gg~~~~~~~~i~ 284 (285)
|.+.+ +++|+++|++ ||+++|+|++|.... ....++|+++.|+||++++ ++||++++++++++
T Consensus 177 -g~v~~---l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~ 248 (409)
T 3jzl_A 177 -FTIEK---IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVD 248 (409)
T ss_dssp -CCHHH---HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHH
T ss_pred -Ccccc---HHHHHHHHHhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHH
Confidence 88877 9999999999 999999999988332 2345789999999999987 67999999988765
No 40
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.90 E-value=3e-23 Score=185.39 Aligned_cols=189 Identities=12% Similarity=0.036 Sum_probs=148.4
Q ss_pred cCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCc----EEEcCChHHHHHHHHHHccccCCCeEEecCCcc
Q psy5413 76 ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEA----AIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSH 151 (285)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~----~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h 151 (285)
+...++++++++.+....+..+...+...++++.+++++|.+. +++++||++|+. ++..++ ++||+|++.++.|
T Consensus 10 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~-~~gd~vi~~~~~~ 87 (384)
T 3zrp_A 10 PTTIKEDVLVAGLENNVGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLL-KPNDKILVVSNGV 87 (384)
T ss_dssp CSCCCHHHHHHTTCCSCCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGC-CTTCEEEEECSSH
T ss_pred CCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhc-CCCCEEEEecCCc
Confidence 3557899999998876544333345668899999999999775 699999999999 988876 6899998877665
Q ss_pred eeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHH
Q psy5413 152 IMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELK 231 (285)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~ 231 (285)
.... ...+. ...|.+++.++.++++.+|+++++++++++ ++++|++++++|++ |.++| +++|.
T Consensus 88 ~~~~-~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~npt-G~~~~---l~~i~ 150 (384)
T 3zrp_A 88 FGDR-WEQIF------KRYPVNVKVLRPSPGDYVKPGEVEEEVRKS------EYKLVALTHVETST-GVREP---VKDVI 150 (384)
T ss_dssp HHHH-HHHHH------TTSSCEEEEECCSTTCCCCHHHHHHHHHHS------CEEEEEEESEETTT-TEECC---HHHHH
T ss_pred chHH-HHHHH------HHcCCcEEEecCCCCCCCCHHHHHHHHHhC------CCcEEEEeCCCCCC-ceECc---HHHHH
Confidence 3311 11222 345888999988777889999999999773 68999999999999 89999 99999
Q ss_pred HHHHHcCCeEEEeCccCC-hh---hhcccCCeEEEecccccCc-ceeEEeecCcccc
Q psy5413 232 ARCQEHNIPVHMDGARLP-LA---EVCASVDTVMFCLSKGLGA-PVGSILAGPEEFI 283 (285)
Q Consensus 232 ~la~~~gi~li~Dea~~~-~~---~~~~~~dv~~~s~sK~l~~-p~gg~~~~~~~~i 283 (285)
++|++||+++|+|++++. .. ....+.|++++|+||++++ +..|+++.+++++
T Consensus 151 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~ 207 (384)
T 3zrp_A 151 NKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKAL 207 (384)
T ss_dssp HHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHH
T ss_pred HHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHH
Confidence 999999999999999882 11 1123679999999999976 4457777777664
No 41
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.90 E-value=6.5e-24 Score=189.70 Aligned_cols=199 Identities=13% Similarity=0.051 Sum_probs=151.0
Q ss_pred eeeeeccCCcCC-CcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHc----CC----CcEEEcCChHHHHHHHHHHcc
Q psy5413 67 RTVDIRSDTISK-PTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLA----GK----EAAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 67 ~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~----g~----~~~~~~~~Gs~a~~~al~~~~ 137 (285)
+++||.++.+.. ++|.+.+++.++......|+......++++.+++++ |. +.+++++||++++..++++++
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~ 103 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVL 103 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHT
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHc
Confidence 778998766555 678999999987744455665445677888888876 54 567999999999999999987
Q ss_pred ccC--CCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccC
Q psy5413 138 DRR--DSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHN 215 (285)
Q Consensus 138 ~~~--g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n 215 (285)
++ |++|+++.++|....... ...|.+++.++.+++...++ ++++++.+ ++++|++++|+|
T Consensus 104 -~~~~gd~vl~~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~-~l~~~~~~-------~~~~v~~~~p~n 165 (376)
T 3ezs_A 104 -FDYQNPTIAYPNPFYQIYEGAA---------KFIKAKSLLMPLTKENDFTP-SLNEKELQ-------EVDLVILNSPNN 165 (376)
T ss_dssp -TTCSSCEEEEEESCCTHHHHHH---------HHTTCEEEEEECCGGGTSCC-CCCHHHHH-------HCSEEEECSSCT
T ss_pred -CCCCCCEEEEecCCcHhHHHHH---------HHcCCEEEEcccCCCCCcch-hHHhhhcc-------CCCEEEEcCCCC
Confidence 57 899999887775443321 23488888888755434454 67777766 789999999999
Q ss_pred CCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh---------hhh-------cccCCeEEEecccccCc--ceeEEee
Q psy5413 216 YCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---------AEV-------CASVDTVMFCLSKGLGA--PVGSILA 277 (285)
Q Consensus 216 ~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---------~~~-------~~~~dv~~~s~sK~l~~--p~gg~~~ 277 (285)
|+ |.+++.+++++|+++|++||+++|+||+|..+ ... ....++++.|+||++|. .+.|+++
T Consensus 166 pt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 244 (376)
T 3ezs_A 166 PT-GRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIA 244 (376)
T ss_dssp TT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEE
T ss_pred Cc-CCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEe
Confidence 99 89999999999999999999999999998821 111 12344669999999863 5567777
Q ss_pred cCccccc
Q psy5413 278 GPEEFIQ 284 (285)
Q Consensus 278 ~~~~~i~ 284 (285)
+++++++
T Consensus 245 ~~~~~~~ 251 (376)
T 3ezs_A 245 GDSRLLE 251 (376)
T ss_dssp ECHHHHH
T ss_pred eCHHHHH
Confidence 7777653
No 42
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.90 E-value=3.5e-23 Score=187.46 Aligned_cols=200 Identities=17% Similarity=0.118 Sum_probs=154.5
Q ss_pred eeeeeccCCcC-CCcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHc----CC----C-cEEEcCChHHHHHHHHHH
Q psy5413 67 RTVDIRSDTIS-KPTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLA----GK----E-AAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 67 ~~~~~~~~~~~-~~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~----g~----~-~~~~~~~Gs~a~~~al~~ 135 (285)
.+++|..+.+. .+++.+.+++.++... ...|.......++++.+++++ |. + .+++++||++|+..++++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~ 105 (411)
T 2o0r_A 26 GAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLG 105 (411)
T ss_dssp TCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHH
T ss_pred CeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHH
Confidence 46888877665 3678999999887654 345665555678888888886 52 3 689999999999999999
Q ss_pred ccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC---CCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 136 HCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK---DGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 136 ~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
++ ++|++|+++.++|....... ...|.+++.++.++ ++.+|+++|++++++ ++++|++++
T Consensus 106 ~~-~~gd~Vl~~~~~y~~~~~~~---------~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~~ 168 (411)
T 2o0r_A 106 LV-EPGSEVLLIEPFYDSYSPVV---------AMAGAHRVTVPLVPDGRGFALDADALRRAVTP-------RTRALIINS 168 (411)
T ss_dssp HC-CTTCEEEEEESCCTTHHHHH---------HHTTCEEEEEECEEETTEEECCHHHHHHHCCT-------TEEEEEEES
T ss_pred hc-CCCCEEEEeCCCcHhHHHHH---------HHcCCEEEEeeccccccCCCCCHHHHHHhhcc-------CceEEEEeC
Confidence 86 58999999877765543321 23477888887643 245899999999976 789999999
Q ss_pred ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc-----ccCCeEEEecccccCc--ceeEEeec
Q psy5413 213 THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC-----ASVDTVMFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 213 ~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~-----~~~dv~~~s~sK~l~~--p~gg~~~~ 278 (285)
|+||+ |.++|.+++++|+++|++||+++|+||+|+.+. .+. .+.|+++.|+||+++. .+.|+++.
T Consensus 169 ~~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 247 (411)
T 2o0r_A 169 PHNPT-GAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACG 247 (411)
T ss_dssp SCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEEC
T ss_pred CCCCC-CCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEee
Confidence 99999 899999999999999999999999999988221 111 3457779999999874 45678877
Q ss_pred Cccccc
Q psy5413 279 PEEFIQ 284 (285)
Q Consensus 279 ~~~~i~ 284 (285)
++++++
T Consensus 248 ~~~~~~ 253 (411)
T 2o0r_A 248 PAELIA 253 (411)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 777653
No 43
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.90 E-value=3.6e-23 Score=188.59 Aligned_cols=198 Identities=14% Similarity=0.089 Sum_probs=153.3
Q ss_pred cCCeeeeeccCCcC-----CCcHHHHHHHHhcccC--CCCccCChhHHHHHHHHHhHcC-------CCcEEEcCChHHHH
Q psy5413 64 VNIRTVDIRSDTIS-----KPTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKAAKLAG-------KEAAIFVPSGTMGN 129 (285)
Q Consensus 64 ~~~~~~~~~~~~~~-----~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g-------~~~~~~~~~Gs~a~ 129 (285)
.++++++|..+.+. .+++++.+++.++... ...|.+.....++++.++++++ .+.+++++||++|+
T Consensus 52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al 131 (427)
T 3dyd_A 52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAI 131 (427)
T ss_dssp TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHH
T ss_pred CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHH
Confidence 36788999988865 4788999999877653 3467666778999999999987 34579999999999
Q ss_pred HHHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC--CCCCCCHHHHHHHhcccccccCCceEE
Q psy5413 130 LIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ--KDGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 130 ~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
..++++++ ++|++|+++.++|..... .. ...|.+++.++.. .++.+|++++++++++ ++++
T Consensus 132 ~~~~~~l~-~~gd~vl~~~p~~~~~~~---~~------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~ 194 (427)
T 3dyd_A 132 DLCLAVLA-NPGQNILVPRPGFSLYKT---LA------ESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE-------KTAC 194 (427)
T ss_dssp HHHHHHHC-CTTCEEEEEESCCTHHHH---HH------HHTTCEEEEEEEEGGGTTEECHHHHHSSCCT-------TEEE
T ss_pred HHHHHHhc-CCCCEEEEcCCCchhHHH---HH------HHcCCEEEEEecccccCCCCCHHHHHHHhcc-------CCCE
Confidence 99999987 589999998877654332 11 2347777777753 3456899999999977 7899
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----------hhcccCCeE-EEecccccCc--ceeE
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----------EVCASVDTV-MFCLSKGLGA--PVGS 274 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----------~~~~~~dv~-~~s~sK~l~~--p~gg 274 (285)
|++++|+||| |.+++.+++++|+++|++||+++|+||+|..+. .+....+++ +.|+||.+++ .+.|
T Consensus 195 v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG 273 (427)
T 3dyd_A 195 LIVNNPSNPC-GSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLG 273 (427)
T ss_dssp EEEESSCTTT-CCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCE
T ss_pred EEEECCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceE
Confidence 9999999999 899999999999999999999999999987321 111223344 7899998655 3345
Q ss_pred EeecC
Q psy5413 275 ILAGP 279 (285)
Q Consensus 275 ~~~~~ 279 (285)
+++.+
T Consensus 274 ~~~~~ 278 (427)
T 3dyd_A 274 WILIH 278 (427)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 55543
No 44
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.90 E-value=2.6e-23 Score=185.17 Aligned_cols=198 Identities=13% Similarity=0.032 Sum_probs=154.2
Q ss_pred CeeeeeccC-CcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCC--CcEEEcCChHHHHHHHHHHccccCCC
Q psy5413 66 IRTVDIRSD-TISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGK--EAAIFVPSGTMGNLIAIMTHCDRRDS 142 (285)
Q Consensus 66 ~~~~~~~~~-~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~--~~~~~~~~Gs~a~~~al~~~~~~~g~ 142 (285)
+.+++|..+ ++..++|++++++.+.......|.... ..++++.+++++|. +.+++++||++|+..++++++ ++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~-~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd 107 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDS-MIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL-NSKN 107 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTT-CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC-CTTC
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCC-hHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHh-CCCC
Confidence 567999865 555578899999998776555665444 37999999999985 467999999999999999987 6899
Q ss_pred eEEecCCcceeeecccccccccccccccceeeeeeec-CCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeee
Q psy5413 143 EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN-QKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTV 221 (285)
Q Consensus 143 ~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~ 221 (285)
+|+++.++|....... ...|.+++.++. .+++ +|++++++++++ ++++|++++|+||+ |.+
T Consensus 108 ~vl~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~-------~~~~v~~~~p~npt-G~~ 169 (365)
T 3get_A 108 AFLQAGVTFAMYEIYA---------KQCGAKCYKTQSITHNL-DEFKKLYETHKD-------EIKLIFLCLPNNPL-GEC 169 (365)
T ss_dssp EEEECSSCCTHHHHHH---------HHHTCEEEECSSSSCCH-HHHHHHHHHTTT-------TEEEEEEESSCTTT-CCC
T ss_pred EEEEeCCChHHHHHHH---------HHcCCEEEEEecCCCCC-CCHHHHHHHhCC-------CCCEEEEcCCCCCC-CCC
Confidence 9999888876543321 234888888886 5667 899999999986 89999999999999 899
Q ss_pred CCHHHHHHHHHHHHHcCCeEEEeCccCChh------------hhc--ccCCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 222 LPMQWLRELKARCQEHNIPVHMDGARLPLA------------EVC--ASVDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 222 ~~~~~l~~i~~la~~~gi~li~Dea~~~~~------------~~~--~~~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
+|.+++++|+++| ++|+++|+||+|..+. ... ...++++.|+||+++. .+.|+++.++++++
T Consensus 170 ~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 247 (365)
T 3get_A 170 LDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIIS 247 (365)
T ss_dssp CCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHH
T ss_pred cCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHH
Confidence 9988888888888 5799999999987322 111 1234568999999864 55677777777653
No 45
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.90 E-value=8.9e-23 Score=185.56 Aligned_cols=195 Identities=17% Similarity=0.190 Sum_probs=149.8
Q ss_pred cHHHHHHHHhcccC------CCCcc-CChhHHHHHHHHHhHcCCCcEEE---cCChHHHHHHHHHHccccCCCeEEecC-
Q psy5413 80 TMEMKNYMFNCEVG------DDVYL-EDPTCKELQEKAAKLAGKEAAIF---VPSGTMGNLIAIMTHCDRRDSEIIVGD- 148 (285)
Q Consensus 80 ~~~v~~a~~~~~~~------~~~y~-~~~~~~~l~~~la~~~g~~~~~~---~~~Gs~a~~~al~~~~~~~g~~vi~~~- 148 (285)
.++|++++.+.... ...|. ..+...+|++.+++++|.+.+++ ++||++|+..++.+++ ++||+|++++
T Consensus 45 ~~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all-~pGD~Vl~~~~ 123 (427)
T 3i16_A 45 QLKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNL-RPGNTMLSVCG 123 (427)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHC-CTTCEEEESSS
T ss_pred HHHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHh-CCCCEEEEeCC
Confidence 46788888764321 22333 45668999999999999998877 8999999999999877 6999999887
Q ss_pred Ccceeeecccccccc-c-ccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEec----ccCCCCeeeC
Q psy5413 149 CSHIMLWEQGGASQT-S-VYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVEN----THNYCGGTVL 222 (285)
Q Consensus 149 ~~h~~~~~~~~~~~~-~-~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~----~~n~~gG~~~ 222 (285)
+.|.......+.... . ......|.+++.++.++++.+|++++++++++ .+++++|++++ |+|++ |.+.
T Consensus 124 ~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~-----~~~tklV~i~~s~~~p~npt-g~i~ 197 (427)
T 3i16_A 124 EPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKE-----DESITLVHIQRSTGYGWRRA-LLIE 197 (427)
T ss_dssp SCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHT-----CTTEEEEEEECSCCSSSSCC-CCHH
T ss_pred CccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhC-----CCCCEEEEEEcCCCCCCCCc-ccHH
Confidence 555433211100000 0 00034588999998877888999999999982 01899999999 99998 7776
Q ss_pred CHHHHHHHHHHHHH--cCCeEEEeCccCChh----hhcccCCeEEEecccccCc---ceeEEeecCccccc
Q psy5413 223 PMQWLRELKARCQE--HNIPVHMDGARLPLA----EVCASVDTVMFCLSKGLGA---PVGSILAGPEEFIQ 284 (285)
Q Consensus 223 ~~~~l~~i~~la~~--~gi~li~Dea~~~~~----~~~~~~dv~~~s~sK~l~~---p~gg~~~~~~~~i~ 284 (285)
+ +++|+++|++ ||+++|+|++|.... ....++|+++.|+||++++ ++||++++++++++
T Consensus 198 d---l~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~ 265 (427)
T 3i16_A 198 D---IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIE 265 (427)
T ss_dssp H---HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHH
T ss_pred H---HHHHHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHH
Confidence 6 9999999999 999999999988322 2335789999999999998 89999999988765
No 46
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.89 E-value=1.6e-23 Score=192.75 Aligned_cols=206 Identities=17% Similarity=0.240 Sum_probs=147.8
Q ss_pred CCeeeeeccCCcCCCcHHHHHHHHhccc-CCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccC---
Q psy5413 65 NIRTVDIRSDTISKPTMEMKNYMFNCEV-GDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRR--- 140 (285)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~--- 140 (285)
|..++||.++.+. +++.+++.+++. +...|+..+...++++.++++++.+.+++++||++|++.++++++ ++
T Consensus 40 ~~~ylD~~~~~~~---~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~-~~~~~ 115 (467)
T 2oqx_A 40 EDVFIDLLTDSGT---GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLI-KKREQ 115 (467)
T ss_dssp GGCSEECSCCSSC---SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHH-HHHHH
T ss_pred CCeeEecccCCCc---HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHh-ccccc
Confidence 5678999877655 788888777654 345677778889999999999999999999999999999999987 45
Q ss_pred --C----CeEEecCCcceeeecccc-cccccccccccceeeeeeecC----CCCCCCHHHHHHHhcccccccCCceEEEE
Q psy5413 141 --D----SEIIVGDCSHIMLWEQGG-ASQTSVYSQIGRVLMRGVTNQ----KDGTFDLDEMEAKFSTADNIHCASTSLVC 209 (285)
Q Consensus 141 --g----~~vi~~~~~h~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~----~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 209 (285)
| |+|++. .+|+.+..... ..... ...+.....++.. .++.+|+++|+++|+++. .+++++|+
T Consensus 116 ~~G~~~~d~Ii~~-~~h~~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~---~~~~~~vi 188 (467)
T 2oqx_A 116 EKGLDRSKMVAFS-NYFFDTTQGHSQINGCT---VRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG---PNNVPYIV 188 (467)
T ss_dssp HHCCCTTTCEEEE-SSCCHHHHHHHHHTTCE---EEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC---GGGCCCEE
T ss_pred cCCCCccceEEec-ccccccchhhhhccCcc---eeeccccccccCCCCCCccCCcCHHHHHHHHHhcC---CCceeEEE
Confidence 7 887765 56744211100 00000 0011111112221 345689999999997521 12789999
Q ss_pred EecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC-----------------hhhhc----ccCCeEEEeccccc
Q psy5413 210 VENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP-----------------LAEVC----ASVDTVMFCLSKGL 268 (285)
Q Consensus 210 i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~-----------------~~~~~----~~~dv~~~s~sK~l 268 (285)
+++++|++||.+++.+++++|+++|++||++||+|++|.. ...+. ..+|++++|+||++
T Consensus 189 ~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~ 268 (467)
T 2oqx_A 189 ATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDA 268 (467)
T ss_dssp EESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTT
T ss_pred EeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEeccccc
Confidence 9999999879999999999999999999999999965421 11221 45788899999999
Q ss_pred CcceeEEeecCcc
Q psy5413 269 GAPVGSILAGPEE 281 (285)
Q Consensus 269 ~~p~gg~~~~~~~ 281 (285)
++|.||+++++++
T Consensus 269 g~~~Gg~~~~~~~ 281 (467)
T 2oqx_A 269 MVPMGGLLCMKDD 281 (467)
T ss_dssp CCSSCEEEEECSG
T ss_pred CCCCceEEEecCh
Confidence 9888898887665
No 47
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.89 E-value=8.5e-23 Score=182.65 Aligned_cols=201 Identities=15% Similarity=0.097 Sum_probs=151.2
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC-CCCcc--CChhHHHHHHHHHhHcC----CCcEEEcCChHHHHHHHHHHc
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYL--EDPTCKELQEKAAKLAG----KEAAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~--~~~~~~~l~~~la~~~g----~~~~~~~~~Gs~a~~~al~~~ 136 (285)
++.+++|..+.+.. ++|++.+++.++... ...|+ ..+...++++.+++.+| .+.+++++||++|+..+++++
T Consensus 23 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l 102 (383)
T 3kax_A 23 NEELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAF 102 (383)
T ss_dssp SSCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH
T ss_pred CCCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh
Confidence 35778888766555 688999999877653 33444 34556777777777766 345799999999999999998
Q ss_pred cccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCC---CCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 137 CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKD---GTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 137 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
+ ++|++|+++.++|....... ...|.+++.++.+++ +.+|+++|++++++ ++++|++++|
T Consensus 103 ~-~~gd~vl~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~i~~p 165 (383)
T 3kax_A 103 T-KENESVLVQPPIYPPFFEMV---------TTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ-------GVKLMLLCSP 165 (383)
T ss_dssp C-CTTCEEEECSSCCHHHHHHH---------HHTTCEEEECCCEEETTEEECCHHHHHHHHTT-------TCCEEEEESS
T ss_pred C-CCCCEEEEcCCCcHHHHHHH---------HHcCCEEEeccceecCCcEEEcHHHHHHHhCc-------CCeEEEEeCC
Confidence 7 68999999888876544322 234788888876432 34899999999965 7899999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----------hhcc---cCCeEEEecccccCc--ceeEEeec
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----------EVCA---SVDTVMFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----------~~~~---~~dv~~~s~sK~l~~--p~gg~~~~ 278 (285)
+||+ |.++|.+++++|+++|++||+++|+||+|..+. .+.. ...+++.|+||+++. .+.|+++.
T Consensus 166 ~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 244 (383)
T 3kax_A 166 HNPI-GRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIII 244 (383)
T ss_dssp BTTT-TBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred CCCC-CcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEe
Confidence 9999 899999999999999999999999999987211 1111 223559999999873 44566655
Q ss_pred -Ccccc
Q psy5413 279 -PEEFI 283 (285)
Q Consensus 279 -~~~~i 283 (285)
+++++
T Consensus 245 ~~~~~~ 250 (383)
T 3kax_A 245 PNEKLR 250 (383)
T ss_dssp CCHHHH
T ss_pred CCHHHH
Confidence 56654
No 48
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.89 E-value=5.9e-23 Score=185.69 Aligned_cols=198 Identities=19% Similarity=0.103 Sum_probs=151.2
Q ss_pred CCeeeeeccCCc---C-CCcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHcC------C--CcEEEcCChHHHHHH
Q psy5413 65 NIRTVDIRSDTI---S-KPTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLAG------K--EAAIFVPSGTMGNLI 131 (285)
Q Consensus 65 ~~~~~~~~~~~~---~-~~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~g------~--~~~~~~~~Gs~a~~~ 131 (285)
|+.+++|..+.+ . ..++++.+++.+.... ...|.......++++.++++++ . +.+++++||++|+..
T Consensus 37 g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~ 116 (406)
T 1xi9_A 37 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQL 116 (406)
T ss_dssp TCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred CCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHH
Confidence 567889988777 3 3567999998876653 2356655556889999988872 2 457999999999999
Q ss_pred HHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccCCceEEEE
Q psy5413 132 AIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHCASTSLVC 209 (285)
Q Consensus 132 al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 209 (285)
++++++ ++|++|+++.++|....... ...|.+++.++.++ ++.+|+++|++++++ ++++|+
T Consensus 117 ~~~~l~-~~gd~Vl~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------~~~~v~ 179 (406)
T 1xi9_A 117 IFGALL-DPGDEILVPGPSYPPYTGLV---------KFYGGKPVEYRTIEEEDWQPDIDDIRKKITD-------RTKAIA 179 (406)
T ss_dssp HHHHHC-CTTCEEEEEESCCHHHHHHH---------HHTTCEEEEEEEEGGGTSEECHHHHHHHCCT-------TEEEEE
T ss_pred HHHHhC-CCCCEEEEcCCCCccHHHHH---------HHcCCEEEEeecCCCcCCcCCHHHHHHhhCc-------CceEEE
Confidence 999986 68999999887775443321 23477888877643 345799999999987 789999
Q ss_pred EecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh---------hhcccC-CeEEEecccccCc--ceeEEee
Q psy5413 210 VENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA---------EVCASV-DTVMFCLSKGLGA--PVGSILA 277 (285)
Q Consensus 210 i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~---------~~~~~~-dv~~~s~sK~l~~--p~gg~~~ 277 (285)
+++|+||+ |.+++.+++++|+++|++||+++|+||+|+.+. .+..+. ++++.|+||+++. .+.|+++
T Consensus 180 i~~p~npt-G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (406)
T 1xi9_A 180 VINPNNPT-GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMY 258 (406)
T ss_dssp EESSCTTT-CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEE
T ss_pred EECCCCCC-CCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEE
Confidence 99999999 899999999999999999999999999987321 111133 5568999999974 4456666
Q ss_pred --cCc
Q psy5413 278 --GPE 280 (285)
Q Consensus 278 --~~~ 280 (285)
.++
T Consensus 259 ~~~~~ 263 (406)
T 1xi9_A 259 FVDPE 263 (406)
T ss_dssp EECTT
T ss_pred EecCc
Confidence 776
No 49
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.89 E-value=1e-22 Score=182.64 Aligned_cols=203 Identities=11% Similarity=0.064 Sum_probs=148.5
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccC--ChhHHHHHHHHHhHcC----CCcEEEcCChHHHHHHHHHHc
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLE--DPTCKELQEKAAKLAG----KEAAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~--~~~~~~l~~~la~~~g----~~~~~~~~~Gs~a~~~al~~~ 136 (285)
|++++||..+.+.. ++|++.+++.++... ...|+. .+...++++.+++.+| .+.+++++||++|+..+++++
T Consensus 26 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l 105 (391)
T 3dzz_A 26 KEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQF 105 (391)
T ss_dssp CTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHH
T ss_pred CCCceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHh
Confidence 45678888766555 678999999887653 334442 2234445555555555 345799999999999999998
Q ss_pred cccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC---CCCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 137 CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ---KDGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 137 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
+ ++|++|+++.++|....... ...|.+++.++.+ ..+.+|+++|++++++. ++++|++++|
T Consensus 106 ~-~~gd~vl~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~~v~i~~p 169 (391)
T 3dzz_A 106 T-SPGDQILVQEPVYNMFYSVI---------EGNGRRVISSDLIYENSKYSVNWADLEEKLATP------SVRMMVFCNP 169 (391)
T ss_dssp S-CTTCEEEECSSCCHHHHHHH---------HHTTCEEEECCCEEETTEEECCHHHHHHHHTST------TEEEEEEESS
T ss_pred C-CCCCeEEECCCCcHHHHHHH---------HHcCCEEEEeeeeecCCceeecHHHHHHHHhcc------CceEEEEECC
Confidence 6 68999999988876554322 2347788888763 22348999999999731 7899999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc----ccCC--eEEEecccccCc--ceeEEeec
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC----ASVD--TVMFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~----~~~d--v~~~s~sK~l~~--p~gg~~~~ 278 (285)
+||+ |.+++.+++++|+++|++||+++|+||+|+.+. .+. ...| +++.|+||+++. .+.|+++.
T Consensus 170 ~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~ 248 (391)
T 3dzz_A 170 HNPI-GYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAII 248 (391)
T ss_dssp BTTT-TBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEEC
T ss_pred CCCC-CcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEE
Confidence 9999 899999999999999999999999999988211 111 1145 669999999863 45567766
Q ss_pred C-ccccc
Q psy5413 279 P-EEFIQ 284 (285)
Q Consensus 279 ~-~~~i~ 284 (285)
+ +++++
T Consensus 249 ~~~~~~~ 255 (391)
T 3dzz_A 249 PNPDLRA 255 (391)
T ss_dssp CSHHHHH
T ss_pred CCHHHHH
Confidence 5 66643
No 50
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.89 E-value=8.1e-23 Score=186.43 Aligned_cols=210 Identities=12% Similarity=0.092 Sum_probs=140.7
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCC-CCccCChhHHHHHHHHHhHc-CCCcEEEcCChHHHHHHHHHHccc
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGD-DVYLEDPTCKELQEKAAKLA-GKEAAIFVPSGTMGNLIAIMTHCD 138 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~-~~y~~~~~~~~l~~~la~~~-g~~~~~~~~~Gs~a~~~al~~~~~ 138 (285)
|++++||.++. .++.+|++.+++.+++... ..+.+++...+|++.+++++ +.+.++|++|||+|++.+++++..
T Consensus 54 g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~ 133 (434)
T 3l44_A 54 GNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARA 133 (434)
T ss_dssp CCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHH
Confidence 56777776653 2457999999998876542 22345777899999999998 567789999999999999998764
Q ss_pred c-CCCeEEe-cCCcceeeeccccccccccc----cccc------ceeeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 139 R-RDSEIIV-GDCSHIMLWEQGGASQTSVY----SQIG------RVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 139 ~-~g~~vi~-~~~~h~~~~~~~~~~~~~~~----~~~~------g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
. .+++|++ ...+|.++...........+ .... ...++.+|. .|+++|++++++ +.++++
T Consensus 134 ~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~----~~~~~~ 204 (434)
T 3l44_A 134 YTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPF-----NNVETLKEALDK----WGHEVA 204 (434)
T ss_dssp HHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECT-----TCHHHHHHHHHH----HGGGEE
T ss_pred hhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCc-----ccHHHHHHHHHh----CCCCEE
Confidence 2 4466766 45566655432221100000 0000 012222222 289999999975 223789
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----hhcccCCeE--EEecccccCc--ceeEEeec
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----EVCASVDTV--MFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----~~~~~~dv~--~~s~sK~l~~--p~gg~~~~ 278 (285)
+|+++++++++|....+++++++|+++|++||++||+||+|+++. ...+..++. +.++||++++ |+|+ +++
T Consensus 205 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~iG~-~~~ 283 (434)
T 3l44_A 205 AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLTALGKVIGGGLPIGA-YGG 283 (434)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEEEEEGGGGTTSSCEE-EEE
T ss_pred EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCeeehhhhhcCCcCeee-EEE
Confidence 999999988874455589999999999999999999999998541 111111221 5678899877 5554 566
Q ss_pred Cccccc
Q psy5413 279 PEEFIQ 284 (285)
Q Consensus 279 ~~~~i~ 284 (285)
++++++
T Consensus 284 ~~~i~~ 289 (434)
T 3l44_A 284 KKEIME 289 (434)
T ss_dssp CHHHHT
T ss_pred cHHHHH
Confidence 777654
No 51
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.89 E-value=2.8e-23 Score=187.91 Aligned_cols=202 Identities=10% Similarity=0.065 Sum_probs=155.2
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC--CCCccCChhHHHHHHHHHhHc----CC-----CcEEEcCChHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKAAKLA----GK-----EAAIFVPSGTMGNLIA 132 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~----g~-----~~~~~~~~Gs~a~~~a 132 (285)
|++++||..+.+.. ++|.+.+++.++... ...|...+...++++.+++++ |. +.+++++||++|+..+
T Consensus 46 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~ 125 (404)
T 2o1b_A 46 PLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAV 125 (404)
T ss_dssp SSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHH
T ss_pred CCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHH
Confidence 56789999877664 578999999877643 234554456788999999987 75 3579999999999999
Q ss_pred HHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEEEEEe
Q psy5413 133 IMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSLVCVE 211 (285)
Q Consensus 133 l~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~ 211 (285)
+++++ ++|++|++..++|....... ...|.+++.++.++ .+.+|+++|++++++ ++++|+++
T Consensus 126 ~~~l~-~~gd~Vl~~~p~y~~~~~~~---------~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~ 188 (404)
T 2o1b_A 126 PTCVI-NPGDYVLLPDPGYTDYLAGV---------LLADGKPVPLNLEPPHYLPDWSKVDSQIID-------KTKLIYLT 188 (404)
T ss_dssp HHHHC-CTTCEEEEEESCCSSHHHHH---------HHTTCEEEEEECCTTTCCCCGGGSCHHHHH-------HEEEEEEC
T ss_pred HHHhc-CCCCEEEEcCCCchhHHHHH---------HHCCCEEEEeccCcccCcCCHHHHHHhhcc-------CceEEEEc
Confidence 99986 58999998877765443321 23477888888754 335789999999976 78999999
Q ss_pred cccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh------hhcc-----cCCeEEEecccccCc--ceeEEeec
Q psy5413 212 NTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA------EVCA-----SVDTVMFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 212 ~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------~~~~-----~~dv~~~s~sK~l~~--p~gg~~~~ 278 (285)
+|+||+ |.++|.+++++|+++|++||+++|+||+|..+. .+.. +.++++.|+||+++. .+.|++++
T Consensus 189 ~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 267 (404)
T 2o1b_A 189 YPNNPT-GSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG 267 (404)
T ss_dssp SSCTTT-CCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEE
T ss_pred CCCCCC-CccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEec
Confidence 999999 899999999999999999999999999987321 1111 234669999999973 45677877
Q ss_pred Cccccc
Q psy5413 279 PEEFIQ 284 (285)
Q Consensus 279 ~~~~i~ 284 (285)
++++++
T Consensus 268 ~~~~~~ 273 (404)
T 2o1b_A 268 NKDMIQ 273 (404)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 777654
No 52
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.89 E-value=3e-23 Score=185.89 Aligned_cols=199 Identities=17% Similarity=0.095 Sum_probs=151.7
Q ss_pred eeeeccCCcCCCcHHHHHHHHhcccCC-----C---CccC-ChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHc
Q psy5413 68 TVDIRSDTISKPTMEMKNYMFNCEVGD-----D---VYLE-DPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 68 ~~~~~~~~~~~~~~~v~~a~~~~~~~~-----~---~y~~-~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~ 136 (285)
.++|.....+..++++.+++.+..... . .|.. .+...++++.+++++|.+ .+++++||++|+..+++++
T Consensus 17 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~ 96 (390)
T 1elu_A 17 KTYFNFGGQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGL 96 (390)
T ss_dssp SEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHS
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCC
Confidence 466666666666788999988765421 1 2332 366889999999999876 5799999999999999998
Q ss_pred -cccCCCeEEecCCcceeeecc-cccccccccccccceeeeeeecC--CCCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 137 -CDRRDSEIIVGDCSHIMLWEQ-GGASQTSVYSQIGRVLMRGVTNQ--KDGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 137 -~~~~g~~vi~~~~~h~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
+ ++|++|+++.++|...... ..+. ...|.+++.++.+ .++.+|+++|++++++ ++++|++++
T Consensus 97 ~~-~~gd~vl~~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~ 162 (390)
T 1elu_A 97 DW-HQGDEILLTDCEHPGIIAIVQAIA------ARFGITYRFFPVAATLNQGDAAAVLANHLGP-------KTRLVILSH 162 (390)
T ss_dssp CC-CTTCEEEEETTCCHHHHHHHHHHH------HHHCCEEEEECCGGGSSSSCHHHHHHTTCCT-------TEEEEEEES
T ss_pred CC-CCCCEEEEecCcccHHHHHHHHHH------HHhCcEEEEEcCCCCCCccchHHHHHHhcCC-------CceEEEEec
Confidence 5 5899999988877554321 1111 2347788888764 4667899999999976 799999999
Q ss_pred ccCCCCeeeCCHHHHHHHHHHHH----HcCCeEEEeCccC-Chhh--h-cccCCeEEEecccccCccee-EEeecCcccc
Q psy5413 213 THNYCGGTVLPMQWLRELKARCQ----EHNIPVHMDGARL-PLAE--V-CASVDTVMFCLSKGLGAPVG-SILAGPEEFI 283 (285)
Q Consensus 213 ~~n~~gG~~~~~~~l~~i~~la~----~~gi~li~Dea~~-~~~~--~-~~~~dv~~~s~sK~l~~p~g-g~~~~~~~~i 283 (285)
++|++ |.++| +++|+++|+ +||+++|+||+|+ +... + ..+.|+++.|+||+++++.| |+++.+++++
T Consensus 163 ~~npt-G~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~ 238 (390)
T 1elu_A 163 LLWNT-GQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCL 238 (390)
T ss_dssp BCTTT-CCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTG
T ss_pred cccCC-ceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHhH
Confidence 99999 89999 999999999 9999999999988 2111 1 23578999999997766444 7787777765
Q ss_pred c
Q psy5413 284 Q 284 (285)
Q Consensus 284 ~ 284 (285)
+
T Consensus 239 ~ 239 (390)
T 1elu_A 239 G 239 (390)
T ss_dssp G
T ss_pred h
Confidence 4
No 53
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.89 E-value=3.1e-23 Score=188.20 Aligned_cols=201 Identities=15% Similarity=0.118 Sum_probs=153.9
Q ss_pred CeeeeeccCCcCC-CcHHHHHHHHhcccCC---CCccCChhHHHHHHHHHhHcC------C---CcEEEcCChHHHHHHH
Q psy5413 66 IRTVDIRSDTISK-PTMEMKNYMFNCEVGD---DVYLEDPTCKELQEKAAKLAG------K---EAAIFVPSGTMGNLIA 132 (285)
Q Consensus 66 ~~~~~~~~~~~~~-~~~~v~~a~~~~~~~~---~~y~~~~~~~~l~~~la~~~g------~---~~~~~~~~Gs~a~~~a 132 (285)
..+++|..+.+.. +++.+.+++.++.... ..|.......++++.++++++ . +.+++++||++|+..+
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~ 107 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTA 107 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHH
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHH
Confidence 4678998877765 6789999998876542 356655556788888888865 2 4579999999999999
Q ss_pred HHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC------------CCCCCHHHHHHHhcccccc
Q psy5413 133 IMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK------------DGTFDLDEMEAKFSTADNI 200 (285)
Q Consensus 133 l~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~d~~~l~~~i~~~~~~ 200 (285)
+++++ ++|++|++..++|....... ...|.+++.++..+ ++.+|++++++++++
T Consensus 108 ~~~~~-~~gd~vl~~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~---- 173 (422)
T 3fvs_A 108 FQALV-DEGDEVIIIEPFFDCYEPMT---------MMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS---- 173 (422)
T ss_dssp HHHHC-CTTCEEEEEESCCTTHHHHH---------HHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT----
T ss_pred HHHHc-CCCCEEEEcCCCchhhHHHH---------HHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC----
Confidence 99986 68999998877765443211 23477888777644 335899999999987
Q ss_pred cCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----------hhcc--cCCeEEEeccccc
Q psy5413 201 HCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----------EVCA--SVDTVMFCLSKGL 268 (285)
Q Consensus 201 ~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----------~~~~--~~dv~~~s~sK~l 268 (285)
++++|++++|+||+ |.+++.+++++|+++|++||+++|+||+|..+. .+.. ..++++.|+||.+
T Consensus 174 ---~~~~v~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 249 (422)
T 3fvs_A 174 ---RTKALVLNTPNNPL-GKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTF 249 (422)
T ss_dssp ---TEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHH
T ss_pred ---CceEEEECCCCCCC-CcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhcc
Confidence 79999999999999 899999999999999999999999999987211 1111 2235689999998
Q ss_pred Cc--ceeEEeecCccccc
Q psy5413 269 GA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 269 ~~--p~gg~~~~~~~~i~ 284 (285)
+. .+.|++++++++++
T Consensus 250 g~~G~r~G~~~~~~~~~~ 267 (422)
T 3fvs_A 250 SATGWKVGWVLGPDHIMK 267 (422)
T ss_dssp TCGGGCCEEEECCHHHHH
T ss_pred CCccceEEEEEeCHHHHH
Confidence 73 56678888777653
No 54
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.89 E-value=2.9e-23 Score=183.50 Aligned_cols=188 Identities=11% Similarity=0.037 Sum_probs=144.0
Q ss_pred CCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccccCCCeEEecCCcc
Q psy5413 74 DTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSH 151 (285)
Q Consensus 74 ~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h 151 (285)
..+...++++++++.+....+..+...+...++++.+++++|.+ .+++++||++|+..++++++ ++|++|+++.+.|
T Consensus 7 ~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~-~~gd~vl~~~~~~ 85 (352)
T 1iug_A 7 PGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLF-APGERVLVPVYGK 85 (352)
T ss_dssp SSSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHC-CTTCEEEEEECSH
T ss_pred CCCCCCCHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhcc-CCCCeEEEEeCCc
Confidence 33466789999999987654333333345789999999999986 46899999999999999986 5899999988776
Q ss_pred eeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHH
Q psy5413 152 IMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELK 231 (285)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~ 231 (285)
.... ..... ...|.+++.++.++++.+|++++++ + ++++|++++++||+ |.++| +++|.
T Consensus 86 ~~~~-~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~---~-------~~~~v~~~~~~npt-G~~~~---l~~i~ 144 (352)
T 1iug_A 86 FSER-FYEIA------LEAGLVVERLDYPYGDTPRPEDVAK---E-------GYAGLLLVHSETST-GALAD---LPALA 144 (352)
T ss_dssp HHHH-HHHHH------HHTTCEEEEEECCTTCCCCTTTSCC---S-------SCSEEEEESEETTT-TEECC---HHHHH
T ss_pred hhHH-HHHHH------HHcCCceEEEeCCCCCCCCHHHHhc---c-------CCcEEEEEEecCCc-ceecC---HHHHH
Confidence 5543 22222 2347888888876667788877765 3 68899999999999 89999 99999
Q ss_pred HHHHHc--CCeEEEeCccC-Chh--hh-cccCCeEEEecccccCccee-EEeecCcccc
Q psy5413 232 ARCQEH--NIPVHMDGARL-PLA--EV-CASVDTVMFCLSKGLGAPVG-SILAGPEEFI 283 (285)
Q Consensus 232 ~la~~~--gi~li~Dea~~-~~~--~~-~~~~dv~~~s~sK~l~~p~g-g~~~~~~~~i 283 (285)
++|++| |+++|+||+|+ +.. .. ..+.|+++.|+||+++++.| |+++.+++++
T Consensus 145 ~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~ 203 (352)
T 1iug_A 145 RAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRAL 203 (352)
T ss_dssp HHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHH
T ss_pred HHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHH
Confidence 999999 99999999987 211 11 12578999999998877533 6776666654
No 55
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.89 E-value=3.2e-23 Score=187.70 Aligned_cols=200 Identities=17% Similarity=0.111 Sum_probs=153.1
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHcCC--------CcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLAGK--------EAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~g~--------~~~~~~~~Gs~a~~~al~ 134 (285)
|+.+++|..+.+.. .++.+.+++ ++... ...|.......++++.++++++. +.+++++||++|+..+++
T Consensus 42 g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~ 120 (409)
T 2gb3_A 42 GVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFA 120 (409)
T ss_dssp TCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred CCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHH
Confidence 56789999877763 567999999 76643 33566555578899999998742 457999999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
+++ ++|++|+++.++|....... ...|.+++.++.++ ++.+ +++|++++++ ++++|++++
T Consensus 121 ~~~-~~gd~Vl~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~-------~~~~v~~~~ 182 (409)
T 2gb3_A 121 VIA-NPGDEILVLEPFYANYNAFA---------KIAGVKLIPVTRRMEEGFAI-PQNLESFINE-------RTKGIVLSN 182 (409)
T ss_dssp HHC-CTTCEEEEEESCCTHHHHHH---------HHHTCEEEEEECCGGGTSCC-CTTGGGGCCT-------TEEEEEEES
T ss_pred HhC-CCCCEEEEcCCCchhHHHHH---------HHcCCEEEEeccCCCCCCcc-HHHHHHhhCc-------CCeEEEECC
Confidence 986 68999999887775543322 23477888888753 2333 7888888876 789999999
Q ss_pred ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh------h-hc--ccCCeEEEecccccCc--ceeEEeecCc-
Q psy5413 213 THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA------E-VC--ASVDTVMFCLSKGLGA--PVGSILAGPE- 280 (285)
Q Consensus 213 ~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------~-~~--~~~dv~~~s~sK~l~~--p~gg~~~~~~- 280 (285)
|+||+ |.+++.+++++|+++|++||+++|+||+|+... . +. ...|+++.|+||+++. .+.|+++.++
T Consensus 183 p~npt-G~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 261 (409)
T 2gb3_A 183 PCNPT-GVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNE 261 (409)
T ss_dssp SCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCH
T ss_pred CCCCC-CCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcH
Confidence 99999 889999999999999999999999999987221 1 11 2457779999999974 4467777776
Q ss_pred cccc
Q psy5413 281 EFIQ 284 (285)
Q Consensus 281 ~~i~ 284 (285)
++++
T Consensus 262 ~l~~ 265 (409)
T 2gb3_A 262 ELIS 265 (409)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 56
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.89 E-value=2.4e-22 Score=182.61 Aligned_cols=163 Identities=17% Similarity=0.192 Sum_probs=134.9
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccccc-ccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGA-SQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~~~~~~~g~~~~~~ 177 (285)
.++...+|++.++++.|.+.+++++||++|+..++++++ ++||+|+++++.|..+...... . ...|.+++.+
T Consensus 79 ~~p~~~~l~~~la~~~g~~~~~~~~sG~~Ai~~al~~l~-~~Gd~Vi~~~~~y~~~~~~~~~~~------~~~g~~~~~v 151 (414)
T 3ndn_A 79 GNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALL-GAGDRLVAARSLFGSCFVVCSEIL------PRWGVQTVFV 151 (414)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTC-CTTCEEEEESCCCHHHHHHHHTHH------HHTTCEEEEE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCccchHHHHHHHHH------HHcCcEEEEe
Confidence 578899999999999999989999999999999999886 6999999988776554321111 1 2358888888
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh---hhhc
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---AEVC 254 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---~~~~ 254 (285)
+.. |+++|++++++ ++++|++++|+||+ |.+.+ +++|+++|++||++||+||+|+.. ....
T Consensus 152 ~~~-----d~~~l~~ai~~-------~t~~v~le~p~Npt-G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~~~ 215 (414)
T 3ndn_A 152 DGD-----DLSQWERALSV-------PTQAVFFETPSNPM-QSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQGFP 215 (414)
T ss_dssp CTT-----CHHHHHHHTSS-------CCSEEEEESSCTTT-CCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCCGG
T ss_pred CCC-----CHHHHHHhcCC-------CCeEEEEECCCCCC-Ccccc---HHHHHHHHHHcCCEEEEECCCcccccCCchh
Confidence 763 89999999987 78999999999999 89999 999999999999999999999822 1234
Q ss_pred ccCCeEEEecccccCc---ceeEEeecCccccc
Q psy5413 255 ASVDTVMFCLSKGLGA---PVGSILAGPEEFIQ 284 (285)
Q Consensus 255 ~~~dv~~~s~sK~l~~---p~gg~~~~~~~~i~ 284 (285)
.++|+++.|++|++++ +++|+++++++.++
T Consensus 216 ~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~ 248 (414)
T 3ndn_A 216 LGVDVVVYSGTKHIDGQGRVLGGAILGDREYID 248 (414)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHT
T ss_pred cCCCeEeccCCccccCCCCceEEEEEECHHHHH
Confidence 5689999999999987 56888888876554
No 57
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.89 E-value=3.2e-23 Score=188.91 Aligned_cols=203 Identities=12% Similarity=0.060 Sum_probs=155.6
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhccc-CC-CCccCChhHHHHHHHHHhHcC--------CCcEEEcCChHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEV-GD-DVYLEDPTCKELQEKAAKLAG--------KEAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~-~~-~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~Gs~a~~~al 133 (285)
|+.+++|.++.+.. +++++.+++.+... +. ..|.......++++.++++++ .+.+++++||++|+..++
T Consensus 43 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~ 122 (437)
T 3g0t_A 43 GTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSF 122 (437)
T ss_dssp TCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHH
T ss_pred CCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHH
Confidence 56789998766655 57899999987765 33 456654556889999999886 346799999999999999
Q ss_pred HHccc-cCCC--eEEecCCcceeeecccccccccccccccceeeeeeecC-CCCCCCHHHHHHHh-cccccccCCceEEE
Q psy5413 134 MTHCD-RRDS--EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ-KDGTFDLDEMEAKF-STADNIHCASTSLV 208 (285)
Q Consensus 134 ~~~~~-~~g~--~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i-~~~~~~~~~~~~~v 208 (285)
++++. ++|+ +|+++.++|....... ...|.+++.++.+ +.+.+|+++|++++ +. ++++|
T Consensus 123 ~~l~~~~~gd~~~Vl~~~p~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~-------~~~~v 186 (437)
T 3g0t_A 123 LVANRTHKNREYGTLFIDPGFNLNKLQC---------RILGQKFESFDLFEYRGEKLREKLESYLQTG-------QFCSI 186 (437)
T ss_dssp HHHTTSCTTCSCCEEEEESCCHHHHHHH---------HHHTCCCEEEEGGGGCTTHHHHHHHHHHTTT-------CCCEE
T ss_pred HHHhcCCCCCccEEEEeCCCcHhHHHHH---------HHcCCEEEEEeecCCCCccCHHHHHHHHhcC-------CceEE
Confidence 98751 4888 8999887775543322 2347788888874 34468999999999 44 78999
Q ss_pred EEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh---------------hhhc--ccCCeEEEecccccCc-
Q psy5413 209 CVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---------------AEVC--ASVDTVMFCLSKGLGA- 270 (285)
Q Consensus 209 ~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---------------~~~~--~~~dv~~~s~sK~l~~- 270 (285)
++++|+||+ |.+++.+++++|+++|++||+++|+||+|+.+ ..+. ...++++.|+||+++.
T Consensus 187 ~l~~p~npt-G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 265 (437)
T 3g0t_A 187 IYSNPNNPT-WQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYA 265 (437)
T ss_dssp EEESSCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCG
T ss_pred EEeCCCCCC-CCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCc
Confidence 999999999 89999999999999999999999999998721 1111 2233669999999874
Q ss_pred -ceeEEeecCccccc
Q psy5413 271 -PVGSILAGPEEFIQ 284 (285)
Q Consensus 271 -p~gg~~~~~~~~i~ 284 (285)
.+.|+++.++++++
T Consensus 266 G~r~G~~~~~~~~~~ 280 (437)
T 3g0t_A 266 GQRIGVLMISGKLYE 280 (437)
T ss_dssp GGCCEEEEECHHHHH
T ss_pred cceeEEEEECHHHhh
Confidence 55678877777654
No 58
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.89 E-value=1.5e-22 Score=184.09 Aligned_cols=189 Identities=18% Similarity=0.214 Sum_probs=149.0
Q ss_pred CcHHHHHHHHhcccC------CCCcc-CChhHHHHHHHHHhHcCCCcEEE---cCChHHHHHHHHHHccccCCCeEEecC
Q psy5413 79 PTMEMKNYMFNCEVG------DDVYL-EDPTCKELQEKAAKLAGKEAAIF---VPSGTMGNLIAIMTHCDRRDSEIIVGD 148 (285)
Q Consensus 79 ~~~~v~~a~~~~~~~------~~~y~-~~~~~~~l~~~la~~~g~~~~~~---~~~Gs~a~~~al~~~~~~~g~~vi~~~ 148 (285)
.+++|++++.+...+ ...|. ..+...+|++.+++++|.+.+++ ++||++|+..++.+++ ++||+|++.+
T Consensus 45 n~~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all-~pGD~Vl~~~ 123 (427)
T 3hvy_A 45 NQLKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNL-RPNDTMMSIC 123 (427)
T ss_dssp HHHHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTC-CTTCEEEECS
T ss_pred hHHHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhc-CCCCEEEEeC
Confidence 357899998875432 22232 35568999999999999998877 8999999999999887 6999999886
Q ss_pred -Ccceeeeccc--------ccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEec----ccC
Q psy5413 149 -CSHIMLWEQG--------GASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVEN----THN 215 (285)
Q Consensus 149 -~~h~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~----~~n 215 (285)
+.|....... ... ...|.+++.++. +++.+|+++++++++++ +++++|++++ |+|
T Consensus 124 ~~~y~~~~~~~g~~~~~~~~~l------~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~-----~~tklV~i~~s~gyp~n 191 (427)
T 3hvy_A 124 GMPYDTLHDIIGMDDSKKVGSL------REYGVKYKMVDL-KDGKVDINTVKEELKKD-----DSIKLIHIQRSTGYGWR 191 (427)
T ss_dssp SSCCGGGHHHHTCCTTCCSCCT------GGGTCEEEECCC-BTTBCCHHHHHHHHHHC-----TTEEEEEEESSCCSSSS
T ss_pred CCCchhHHHHhccccchhhhHH------HHcCCEEEEecC-CCCCcCHHHHHHHhhCC-----CCCEEEEEECCCCCCCC
Confidence 5543322110 111 245888888888 67889999999999830 1899999999 999
Q ss_pred CCCeeeCCHHHHHHHHHHHHH--cCCeEEEeCccCCh----hhhcccCCeEEEecccccCc---ceeEEeecCccccc
Q psy5413 216 YCGGTVLPMQWLRELKARCQE--HNIPVHMDGARLPL----AEVCASVDTVMFCLSKGLGA---PVGSILAGPEEFIQ 284 (285)
Q Consensus 216 ~~gG~~~~~~~l~~i~~la~~--~gi~li~Dea~~~~----~~~~~~~dv~~~s~sK~l~~---p~gg~~~~~~~~i~ 284 (285)
++ |.+.+ +++|+++|++ ||+++|+|++|+.. .....++|+++.|+||++++ ++||++++++++++
T Consensus 192 pt-g~v~d---l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~ 265 (427)
T 3hvy_A 192 KS-LRIAE---IAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVT 265 (427)
T ss_dssp CC-CCHHH---HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHH
T ss_pred cc-ccHHH---HHHHHHHHHHhCCCCEEEEECCccccccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHHH
Confidence 98 77766 9999999999 89999999998832 23345689999999999998 89999999988765
No 59
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.89 E-value=1.3e-22 Score=181.30 Aligned_cols=196 Identities=18% Similarity=0.169 Sum_probs=149.0
Q ss_pred eeccCCcCCCcHHHHHHHHhcccCC---C------CccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccc
Q psy5413 70 DIRSDTISKPTMEMKNYMFNCEVGD---D------VYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCD 138 (285)
Q Consensus 70 ~~~~~~~~~~~~~v~~a~~~~~~~~---~------~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~ 138 (285)
.|.....+.+++++++++.++.... . .|...+...++++.+++++|.+ .+++++||++|+..+++++..
T Consensus 4 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~ 83 (384)
T 1eg5_A 4 YFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAE 83 (384)
T ss_dssp ECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHH
T ss_pred EEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhh
Confidence 3444444578899999998776531 0 1223355789999999999975 679999999999999999862
Q ss_pred ---cCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccC
Q psy5413 139 ---RRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHN 215 (285)
Q Consensus 139 ---~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n 215 (285)
++|++|+++.+.|.......... ...|.+++.++.++++.+|+++|++++++ ++++|++++++|
T Consensus 84 ~~~~~gd~vl~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~~~n 150 (384)
T 1eg5_A 84 TFEKRKRTIITTPIEHKAVLETMKYL------SMKGFKVKYVPVDSRGVVKLEELEKLVDE-------DTFLVSIMAANN 150 (384)
T ss_dssp HTTTTCCEEEECTTSCHHHHHHHHHH------HHTTCEEEECCBCTTSCBCHHHHHHHCCT-------TEEEEEEESBCT
T ss_pred hccCCCCEEEECCCCchHHHHHHHHH------HhcCCEEEEEccCCCCccCHHHHHHHhCC-------CCeEEEEECCCC
Confidence 58999999888775443322111 23478888888877778999999999987 799999999999
Q ss_pred CCCeeeCCHHHHHHHHHHHHHcC--CeEEEeCccC-Chh--hhc-ccCCeEEEecccccCcceeEEeecCccc
Q psy5413 216 YCGGTVLPMQWLRELKARCQEHN--IPVHMDGARL-PLA--EVC-ASVDTVMFCLSKGLGAPVGSILAGPEEF 282 (285)
Q Consensus 216 ~~gG~~~~~~~l~~i~~la~~~g--i~li~Dea~~-~~~--~~~-~~~dv~~~s~sK~l~~p~gg~~~~~~~~ 282 (285)
|+ |.++| +++|.++|++|| +++|+||+|+ +.. .+. .+.|++++|+||+++.+-.|+++.++++
T Consensus 151 pt-G~~~~---~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~ 219 (384)
T 1eg5_A 151 EV-GTIQP---VEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV 219 (384)
T ss_dssp TT-CBBCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS
T ss_pred Cc-ccccC---HHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCC
Confidence 99 89999 899999999999 9999999987 111 111 2578999999998765323677776654
No 60
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.89 E-value=7.9e-23 Score=181.37 Aligned_cols=196 Identities=9% Similarity=0.082 Sum_probs=149.8
Q ss_pred eeeeccCCcCCCcHHHHHHHHhcccCCCCcc--CChhHHHHHHHHHhHcCCC----cEEEcCChHHHHHHHHHHccccCC
Q psy5413 68 TVDIRSDTISKPTMEMKNYMFNCEVGDDVYL--EDPTCKELQEKAAKLAGKE----AAIFVPSGTMGNLIAIMTHCDRRD 141 (285)
Q Consensus 68 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~--~~~~~~~l~~~la~~~g~~----~~~~~~~Gs~a~~~al~~~~~~~g 141 (285)
+++|..+ +...+|++.+++.++. ++ .+. ..+...++++.+++++|.+ .+++++||++|+..++++++ ++|
T Consensus 5 ~~~~~~g-p~~~~~~v~~a~~~~~-~~-~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~-~~g 80 (366)
T 1m32_A 5 YLLLTPG-PLTTSRTVKEAMLFDS-CT-WDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSAL-GPQ 80 (366)
T ss_dssp CEECSSS-SCCCCHHHHHTTCCCC-CT-TSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSC-CTT
T ss_pred cccccCC-CcCCCHHHHHHHhhhh-cC-CCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhc-CCC
Confidence 4677777 5668899999998754 22 222 1256899999999999843 37999999999999999987 588
Q ss_pred CeEEec-CCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCee
Q psy5413 142 SEIIVG-DCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGT 220 (285)
Q Consensus 142 ~~vi~~-~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~ 220 (285)
++|++. +.+|..... ... ...|.+++.++.++++.+|+++|+++++++ .++++|++++++||+ |.
T Consensus 81 d~vi~~~~~~~~~~~~--~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~~v~~~~~~npt-G~ 146 (366)
T 1m32_A 81 DKVLIVSNGAYGARMV--EMA------GLMGIAHHAYDCGEVARPDVQAIDAILNAD-----PTISHIAMVHSETTT-GM 146 (366)
T ss_dssp CCEEEEESSHHHHHHH--HHH------HHHTCCEEEEECCTTSCCCHHHHHHHHHHC-----TTCCEEEEESEETTT-TE
T ss_pred CeEEEEeCCCccHHHH--HHH------HHhCCceEEEeCCCCCCCCHHHHHHHHhcC-----CCeEEEEEecccCCc-ce
Confidence 887654 577754221 122 234778888887677779999999999761 147899999999999 89
Q ss_pred eCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh--hh-cccCCeEEEecccccCccee-EEeecCccccc
Q psy5413 221 VLPMQWLRELKARCQEHNIPVHMDGARL-PLA--EV-CASVDTVMFCLSKGLGAPVG-SILAGPEEFIQ 284 (285)
Q Consensus 221 ~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~--~~-~~~~dv~~~s~sK~l~~p~g-g~~~~~~~~i~ 284 (285)
++| +++|+++|++||+++|+||+|+ +.. .+ ..+.|+++.|+||+++++.| |+++.++++++
T Consensus 147 ~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~ 212 (366)
T 1m32_A 147 LNP---IDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLA 212 (366)
T ss_dssp ECC---HHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHT
T ss_pred ecC---HHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHH
Confidence 999 9999999999999999999987 111 11 13578999999999977554 88888777654
No 61
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.89 E-value=3.9e-23 Score=186.75 Aligned_cols=201 Identities=17% Similarity=0.107 Sum_probs=153.6
Q ss_pred CeeeeeccCCcCC-CcHHHHHHHHhcccC--CCCccCChhHHHHHHHHHhHcC--------C-CcEEEcCChHHHHHHHH
Q psy5413 66 IRTVDIRSDTISK-PTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKAAKLAG--------K-EAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 66 ~~~~~~~~~~~~~-~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g--------~-~~~~~~~~Gs~a~~~al 133 (285)
..+++|..+.+.. +++.+.+++.++... ...|.......++++.++++++ . +.+++++||++|+..++
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~ 102 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSI 102 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHH
Confidence 4578998887765 678999999887653 2356554456789999998875 2 56899999999999999
Q ss_pred HHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC-----------CCCCCCHHHHHHHhcccccccC
Q psy5413 134 MTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ-----------KDGTFDLDEMEAKFSTADNIHC 202 (285)
Q Consensus 134 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~d~~~l~~~i~~~~~~~~ 202 (285)
++++ ++|++|++..++|....... ...|.+++.++.. .++.+|++++++++++
T Consensus 103 ~~~~-~~gd~vl~~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~------ 166 (410)
T 3e2y_A 103 QGLV-DPGDEVIIMVPFYDCYEPMV---------RMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS------ 166 (410)
T ss_dssp HHHC-CTTCEEEEEESCCTTHHHHH---------HHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT------
T ss_pred HHhc-CCCCEEEEeCCCchhhHHHH---------HHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC------
Confidence 9987 58999998877765443321 2347777777653 2345799999999976
Q ss_pred CceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----------hhcc--cCCeEEEecccccCc
Q psy5413 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----------EVCA--SVDTVMFCLSKGLGA 270 (285)
Q Consensus 203 ~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----------~~~~--~~dv~~~s~sK~l~~ 270 (285)
++++|++++|+||+ |.+++.+++++|+++|++||+++|+||+|..+. .+.. ...+++.|+||+++.
T Consensus 167 -~~~~v~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~ 244 (410)
T 3e2y_A 167 -KTKAIILNTPHNPL-GKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSV 244 (410)
T ss_dssp -TEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSC
T ss_pred -CceEEEEeCCCCCC-CcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCC
Confidence 79999999999999 899999999999999999999999999987211 1111 122558999999873
Q ss_pred --ceeEEeecCccccc
Q psy5413 271 --PVGSILAGPEEFIQ 284 (285)
Q Consensus 271 --p~gg~~~~~~~~i~ 284 (285)
.+.|++++++++++
T Consensus 245 ~G~r~G~~~~~~~~~~ 260 (410)
T 3e2y_A 245 TGWKLGWSIGPAHLIK 260 (410)
T ss_dssp GGGCCEEEECCHHHHH
T ss_pred CCceEEEEEECHHHHH
Confidence 56678888877654
No 62
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.89 E-value=1.5e-22 Score=181.94 Aligned_cols=200 Identities=12% Similarity=0.051 Sum_probs=148.4
Q ss_pred cCCeeeeeccCCcCCC-cHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHcC--------CCcEEEcCChHHHHHHHH
Q psy5413 64 VNIRTVDIRSDTISKP-TMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLAG--------KEAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 64 ~~~~~~~~~~~~~~~~-~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~Gs~a~~~al 133 (285)
.|++++||.++.+..+ +|++.+++.++... ...|.......++++.++++++ .+.+++++||++|+..++
T Consensus 29 ~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~ 108 (391)
T 3h14_A 29 AGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAF 108 (391)
T ss_dssp TTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHH
T ss_pred cCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHH
Confidence 4678899998777664 67899999887653 3456554456789999988863 356799999999999999
Q ss_pred HHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCC--CCCCHHHHHHHhcccccccCCceEEEEEe
Q psy5413 134 MTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKD--GTFDLDEMEAKFSTADNIHCASTSLVCVE 211 (285)
Q Consensus 134 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~i~ 211 (285)
++++ ++|++|+++.++|...... . ...|.+++.++.+++ +.+|+++++++ ++++|+++
T Consensus 109 ~~l~-~~gd~vl~~~p~~~~~~~~---~------~~~g~~~~~v~~~~~~~~~~d~~~l~~~----------~~~~v~i~ 168 (391)
T 3h14_A 109 TALF-DSGDRVGIGAPGYPSYRQI---L------RALGLVPVDLPTAPENRLQPVPADFAGL----------DLAGLMVA 168 (391)
T ss_dssp HHHC-CTTCEEEEEESCCHHHHHH---H------HHTTCEEEEEECCGGGTTSCCHHHHTTS----------CCSEEEEE
T ss_pred HHhc-CCCCEEEEcCCCCccHHHH---H------HHcCCEEEEeecCcccCCCCCHHHHHhc----------CCeEEEEC
Confidence 9987 6899999988777554332 1 234888888887543 45798888765 36899999
Q ss_pred cccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh------hhc--ccCCeEEEecccccCc--ceeEEeecCcc
Q psy5413 212 NTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA------EVC--ASVDTVMFCLSKGLGA--PVGSILAGPEE 281 (285)
Q Consensus 212 ~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------~~~--~~~dv~~~s~sK~l~~--p~gg~~~~~~~ 281 (285)
+|+||+ |.++|.+++++|+++|++||+++|+||+|..+. ... ...++++.|+||+++. .+.|+++.+++
T Consensus 169 ~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 247 (391)
T 3h14_A 169 SPANPT-GTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPED 247 (391)
T ss_dssp SSCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGG
T ss_pred CCCCCC-CccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHH
Confidence 999999 899999999999999999999999999988221 111 1233568999999863 56678888777
Q ss_pred ccc
Q psy5413 282 FIQ 284 (285)
Q Consensus 282 ~i~ 284 (285)
+++
T Consensus 248 ~~~ 250 (391)
T 3h14_A 248 QVR 250 (391)
T ss_dssp GHH
T ss_pred HHH
Confidence 654
No 63
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.89 E-value=5.4e-23 Score=184.81 Aligned_cols=191 Identities=17% Similarity=0.159 Sum_probs=149.0
Q ss_pred eccCCcCCCcHHHHHHHHhcccCCCCcc--CChhHHHHHHHHHhHcCCC---cEEEcCChHHHHHHHHHHccccCCCeEE
Q psy5413 71 IRSDTISKPTMEMKNYMFNCEVGDDVYL--EDPTCKELQEKAAKLAGKE---AAIFVPSGTMGNLIAIMTHCDRRDSEII 145 (285)
Q Consensus 71 ~~~~~~~~~~~~v~~a~~~~~~~~~~y~--~~~~~~~l~~~la~~~g~~---~~~~~~~Gs~a~~~al~~~~~~~g~~vi 145 (285)
+.+.++...++++.+++.+.... .|+ ..+...++++.+++++|.+ .+++++||++|+..++++++ ++|++|+
T Consensus 37 l~~~~~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~-~~gd~Vl 113 (393)
T 1vjo_A 37 LLGPGPSNAHPSVLQAMNVSPVG--HLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAV-EPGDVVL 113 (393)
T ss_dssp ECSSSCCCCCHHHHHHHSSCCCC--TTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC-CTTCEEE
T ss_pred eccCCCCCCCHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhcc-CCCCEEE
Confidence 44555677899999999887653 343 2245788899999998875 57999999999999999987 5899999
Q ss_pred ecCCccee--eecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCC
Q psy5413 146 VGDCSHIM--LWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLP 223 (285)
Q Consensus 146 ~~~~~h~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~ 223 (285)
+..++|.. ... .. ...|.+++.++.++++.+|+++|++++++. ++++|++++++||+ |.+.|
T Consensus 114 ~~~~~~~~~~~~~---~~------~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~~v~~~~~~npt-G~~~~ 177 (393)
T 1vjo_A 114 IGVAGYFGNRLVD---MA------GRYGADVRTISKPWGEVFSLEELRTALETH------RPAILALVHAETST-GARQP 177 (393)
T ss_dssp EEESSHHHHHHHH---HH------HHTTCEEEEEECCTTCCCCHHHHHHHHHHH------CCSEEEEESEETTT-TEECC
T ss_pred EEcCChhHHHHHH---HH------HHcCCceEEEecCCCCCCCHHHHHHHHhhC------CceEEEEeccCCCc-ceecc
Confidence 98877654 222 12 234788888888777789999999999762 57899999999999 88999
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC-C---hhhhcccCCeEEEecccccCcce-eEEeecCcccc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL-P---LAEVCASVDTVMFCLSKGLGAPV-GSILAGPEEFI 283 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~-~---~~~~~~~~dv~~~s~sK~l~~p~-gg~~~~~~~~i 283 (285)
+++|+++|++||+++|+||+|+ + ......+.|+++.|+||++++|. .|+++.+++++
T Consensus 178 ---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~ 239 (393)
T 1vjo_A 178 ---LEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAI 239 (393)
T ss_dssp ---CTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHH
T ss_pred ---HHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHHHH
Confidence 8999999999999999999988 1 11111356889999999998843 37777777654
No 64
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.89 E-value=3.8e-22 Score=181.48 Aligned_cols=205 Identities=19% Similarity=0.149 Sum_probs=142.7
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccCCCC---ccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHcc
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVGDDV---YLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~~~---y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~ 137 (285)
|++++||.++ ..++++|++.+++.+++..... ....+...++++.+++++|.+.+++++||++|++.+++++.
T Consensus 56 g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~ 135 (420)
T 2pb2_A 56 GKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLAR 135 (420)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHH
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHH
Confidence 6778898765 3455789999999887653211 12467789999999999998889999999999999999876
Q ss_pred cc------CCC-eEEec-CCcceeeeccccccccccccccc---ceeeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 138 DR------RDS-EIIVG-DCSHIMLWEQGGASQTSVYSQIG---RVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 138 ~~------~g~-~vi~~-~~~h~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
.. +|+ +|++. ..+|..+...........+...+ ...+..++. .|+++|+++|++ +++
T Consensus 136 ~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~le~~i~~-------~~~ 203 (420)
T 2pb2_A 136 HYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMDD-------HTC 203 (420)
T ss_dssp HHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCCT-------TEE
T ss_pred HHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-----CCHHHHHHHhcc-------Cce
Confidence 32 564 67765 45666554322111000000000 111333333 389999999986 899
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh---------hcccCCeEEEecccccCc--ceeEE
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE---------VCASVDTVMFCLSKGLGA--PVGSI 275 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~---------~~~~~dv~~~s~sK~l~~--p~gg~ 275 (285)
+|++++++|++|..+++.+++++|+++|++||++||+||+|+++.. .....|++ +++|++++ |.|++
T Consensus 204 ~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l~~G~~iG~~ 281 (420)
T 2pb2_A 204 AVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPVSAM 281 (420)
T ss_dssp EEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEEE
T ss_pred EEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--EecccccCCCceEEE
Confidence 9999999987633679999999999999999999999999984321 11134655 67899986 45554
Q ss_pred eecCccccc
Q psy5413 276 LAGPEEFIQ 284 (285)
Q Consensus 276 ~~~~~~~i~ 284 (285)
+ .++++++
T Consensus 282 ~-~~~~l~~ 289 (420)
T 2pb2_A 282 L-TTQEIAS 289 (420)
T ss_dssp E-ECHHHHT
T ss_pred E-EhHHHHH
Confidence 4 4555554
No 65
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.89 E-value=4.7e-23 Score=189.52 Aligned_cols=232 Identities=14% Similarity=0.087 Sum_probs=159.4
Q ss_pred CCccccccccccccccCCCCCccceeeccCCccccccccCCeeeeeccCCcCCCcHHHHHHHHhcccC----CCCcc-CC
Q psy5413 26 TPALVESTPLSRSWSDNGNLSIPAMYCWLLPVPLRLGKVNIRTVDIRSDTISKPTMEMKNYMFNCEVG----DDVYL-ED 100 (285)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~----~~~y~-~~ 100 (285)
.|..+.+..+.++|+..++.+++.++.||.. +.++.+|++.+|+.+|+.. +..++ .+
T Consensus 49 ~P~vi~rg~G~~l~D~dG~~ylD~~~g~~~~------------------~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~ 110 (473)
T 4e3q_A 49 GTVVVTHGEGPYIVDVNGRRYLDANSGLWNM------------------VAGFDHKGLIDAAKAQYERFPGYHAFFGRMS 110 (473)
T ss_dssp CCEEEEEEETTEEEETTCCEEEETTTTTTTC------------------TTCSCCHHHHHHHHHHHHHCCCCCCCTTEEE
T ss_pred CCEEEEeeecCEEEeCCCCEEEEcccCHHHh------------------hccCCCHHHHHHHHHHHHhcccccccccccC
Confidence 4677888888999988777777777666653 2377999999999987753 22333 45
Q ss_pred hhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHHHHHcccc------CCCe-EEe-cCCcceeeecccccccccccccc-
Q psy5413 101 PTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIAIMTHCDR------RDSE-IIV-GDCSHIMLWEQGGASQTSVYSQI- 169 (285)
Q Consensus 101 ~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~al~~~~~~------~g~~-vi~-~~~~h~~~~~~~~~~~~~~~~~~- 169 (285)
+...+|.++|+++.. .++++|++|||+|++.|++++... +++. ||. ...||+.+.....+.. ..+...
T Consensus 111 ~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg-~~~~~~~ 189 (473)
T 4e3q_A 111 DQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTG-KPYNSVF 189 (473)
T ss_dssp HHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC-CGGGGGG
T ss_pred HHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccc-ccccccc
Confidence 668899999999974 567899999999999999997531 3333 443 5788987754322221 111111
Q ss_pred ----cceeeeeeec----CCCCC-------CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHH
Q psy5413 170 ----GRVLMRGVTN----QKDGT-------FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARC 234 (285)
Q Consensus 170 ----~g~~~~~~~~----~~~~~-------~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la 234 (285)
.+...+..|. .+.+. ...+++++.|.+. +.+++++|++|++++..|..+.|++++++|+++|
T Consensus 190 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc 266 (473)
T 4e3q_A 190 GLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQRE---GADTIAGFFAEPVMGAGGVIPPAKGYFQAILPIL 266 (473)
T ss_dssp TCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHH---CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHH
T ss_pred CCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhh---CCCceEEEEeCCccCCCCceeCCHHHHHHHHHHh
Confidence 1222222221 01111 1234566666442 3447999999999999866677789999999999
Q ss_pred HHcCCeEEEeCccCCh-----hhhcccCCeE--EEecccccCc---ceeEEeecC
Q psy5413 235 QEHNIPVHMDGARLPL-----AEVCASVDTV--MFCLSKGLGA---PVGSILAGP 279 (285)
Q Consensus 235 ~~~gi~li~Dea~~~~-----~~~~~~~dv~--~~s~sK~l~~---p~gg~~~~~ 279 (285)
++||++||+||+++++ ....++.++. +.+++|.+++ |+|++++++
T Consensus 267 ~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~~~~ 321 (473)
T 4e3q_A 267 RKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGP 321 (473)
T ss_dssp HHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEEECH
T ss_pred cccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCcccccccH
Confidence 9999999999998844 3344556666 7778899976 888777654
No 66
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.89 E-value=6.6e-23 Score=184.12 Aligned_cols=190 Identities=17% Similarity=0.136 Sum_probs=146.0
Q ss_pred cCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCc---EEEcCChHHHHHHHHHHccccCCCeEEecCCcce
Q psy5413 76 ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEA---AIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152 (285)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~---~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~ 152 (285)
+...++++.+++.+....+......+...++++.+++++|.+. +++++||++|+..++++++ ++|++|+++.+.|.
T Consensus 27 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-~~gd~vl~~~~~~~ 105 (393)
T 2huf_A 27 PSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLL-EDGDVILIGHTGHW 105 (393)
T ss_dssp CCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHC-CTTCEEEEEESSHH
T ss_pred CCCCCHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHh-CCCCEEEEECCCcc
Confidence 4567899999998876543211234568899999999999753 5799999999999999986 58999999887765
Q ss_pred eeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHH
Q psy5413 153 MLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKA 232 (285)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~ 232 (285)
... ..... ...|.+++.++.++++.+|+++++++|++. ++++|++++++|++ |.++| +++|++
T Consensus 106 ~~~-~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~npt-G~~~~---l~~i~~ 168 (393)
T 2huf_A 106 GDR-SADMA------TRYGADVRVVKSKVGQSLSLDEIRDALLIH------KPSVLFLTQGDSST-GVLQG---LEGVGA 168 (393)
T ss_dssp HHH-HHHHH------HHTTCEEEEEECCTTCCCCHHHHHHHHHHH------CCSEEEEESEETTT-TEECC---CTTHHH
T ss_pred hHH-HHHHH------HHcCCeeEEEeCCCCCCCCHHHHHHHHhcc------CCcEEEEEccCCCc-cccCC---HHHHHH
Confidence 421 11122 235788888887677789999999999752 57899999999999 89999 999999
Q ss_pred HHHHcCCeEEEeCccC-Chh--hh-cccCCeEEEecccccCccee-EEeecCcccc
Q psy5413 233 RCQEHNIPVHMDGARL-PLA--EV-CASVDTVMFCLSKGLGAPVG-SILAGPEEFI 283 (285)
Q Consensus 233 la~~~gi~li~Dea~~-~~~--~~-~~~~dv~~~s~sK~l~~p~g-g~~~~~~~~i 283 (285)
+|++||+++|+||++. +.. .+ ..+.|+++.|+||+++++.| |+++.+++++
T Consensus 169 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~ 224 (393)
T 2huf_A 169 LCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAV 224 (393)
T ss_dssp HHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHH
T ss_pred HHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHH
Confidence 9999999999999987 111 11 13578999999999876333 6777776654
No 67
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.89 E-value=6.5e-23 Score=185.09 Aligned_cols=194 Identities=14% Similarity=0.091 Sum_probs=149.9
Q ss_pred eeccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCc---EEEcCChHHHHHHHHHHccccCCCeEEe
Q psy5413 70 DIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEA---AIFVPSGTMGNLIAIMTHCDRRDSEIIV 146 (285)
Q Consensus 70 ~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~---~~~~~~Gs~a~~~al~~~~~~~g~~vi~ 146 (285)
.+.+..+...++++.+++.++..++......+...++++.++++++.+. +++++||++|+..++++++ ++||+|++
T Consensus 15 ~~~~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~-~~gd~Vl~ 93 (411)
T 3nnk_A 15 LLMGPGPINADPRVLRAMSSQLIGQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAI-RPGDKVLV 93 (411)
T ss_dssp EEESSSCCCCCHHHHHHHTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHC-CTTCEEEE
T ss_pred eeecCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhc-CCCCEEEE
Confidence 3444556778999999998876543322223557899999999998754 4788899999999999986 68999999
Q ss_pred cCCccee--eecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCH
Q psy5413 147 GDCSHIM--LWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPM 224 (285)
Q Consensus 147 ~~~~h~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~ 224 (285)
..+.|.. ... .. ...|.+++.++.++++.+|+++|+++|+++ ++++|++++++|++ |.+.|
T Consensus 94 ~~~~~~~~~~~~---~~------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~npt-G~~~~- 156 (411)
T 3nnk_A 94 PVFGRFGHLLCE---IA------RRCRAEVHTIEVPWGEVFTPDQVEDAVKRI------RPRLLLTVQGDTST-TMLQP- 156 (411)
T ss_dssp EECSHHHHHHHH---HH------HHTTCEEEEEECCTTCCCCHHHHHHHHHHH------CCSEEEEESEETTT-TEECC-
T ss_pred ecCCchHHHHHH---HH------HHcCCeEEEEecCCCCCCCHHHHHHHHhhC------CCeEEEEeCCCCCc-ceecc-
Confidence 8877643 221 22 345888889988777888999999999752 68999999999999 89999
Q ss_pred HHHHHHHHHHHHcCCeEEEeCccC-C---hhhhcccCCeEEEecccccCcc-eeEEeecCcccc
Q psy5413 225 QWLRELKARCQEHNIPVHMDGARL-P---LAEVCASVDTVMFCLSKGLGAP-VGSILAGPEEFI 283 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~Dea~~-~---~~~~~~~~dv~~~s~sK~l~~p-~gg~~~~~~~~i 283 (285)
+++|+++|++||+++|+||+++ + ......++|+++.++||+++++ ..|+++.+++++
T Consensus 157 --l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~ 218 (411)
T 3nnk_A 157 --LAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARME 218 (411)
T ss_dssp --CTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHH
T ss_pred --HHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHH
Confidence 9999999999999999999987 2 1112236789999999997663 347777776654
No 68
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.89 E-value=1.2e-22 Score=184.59 Aligned_cols=202 Identities=14% Similarity=0.132 Sum_probs=145.5
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccC--ChhHHHHHHHHHhHcC----CCcEEEcCChHHHHHHHHHHc
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLE--DPTCKELQEKAAKLAG----KEAAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~--~~~~~~l~~~la~~~g----~~~~~~~~~Gs~a~~~al~~~ 136 (285)
++.++||..+.+.. ++|++.+++.++... ...|.. .+...++++.+++.++ .+.+++++||++|++.+++++
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~ 139 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAF 139 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHh
Confidence 45778887665554 678999999877652 344442 3344555555555555 345799999999999999998
Q ss_pred cccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC---CCCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 137 CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ---KDGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 137 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
+ ++|++|++..+.|....... ...|.+++.+|.. .++.+|+++|++++++. ++++|++++|
T Consensus 140 ~-~~gd~Vi~~~~~y~~~~~~~---------~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~------~~~~vil~~p 203 (421)
T 3l8a_A 140 S-EKGDAVLINSPVYYPFARTI---------RLNDHRLVENSLQIINGRFEIDFEQLEKDIIDN------NVKIYLLCSP 203 (421)
T ss_dssp S-CTEEEEEEEESCCHHHHHHH---------HHTTEEEEEEECEEETTEEECCHHHHHHHHHHT------TEEEEEEESS
T ss_pred c-CCCCEEEECCCCcHHHHHHH---------HHCCCEEEeccccccCCCeeeCHHHHHHHhhcc------CCeEEEECCC
Confidence 6 58899998777665433211 2347777877753 22358999999999731 7999999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----------hhc---ccCCeEEEecccccCc--ceeEEeec
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----------EVC---ASVDTVMFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----------~~~---~~~dv~~~s~sK~l~~--p~gg~~~~ 278 (285)
+||+ |.+++.+++++|+++|++||++||+||+|+.+. .+. ....+++.|+||+++. ...|+++.
T Consensus 204 ~npt-G~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~ 282 (421)
T 3l8a_A 204 HNPG-GRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAII 282 (421)
T ss_dssp BTTT-TBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred CCCC-CCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEc
Confidence 9999 799999999999999999999999999987321 111 1223559999999863 33455554
Q ss_pred C-cccc
Q psy5413 279 P-EEFI 283 (285)
Q Consensus 279 ~-~~~i 283 (285)
+ ++++
T Consensus 283 ~~~~l~ 288 (421)
T 3l8a_A 283 QNESLR 288 (421)
T ss_dssp CSHHHH
T ss_pred CCHHHH
Confidence 4 6654
No 69
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.89 E-value=1.4e-22 Score=187.23 Aligned_cols=217 Identities=17% Similarity=0.138 Sum_probs=144.4
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccCC---CC-ccCChhHHHHHHHHHhHc--CCCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVGD---DV-YLEDPTCKELQEKAAKLA--GKEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~---~~-y~~~~~~~~l~~~la~~~--g~~~~~~~~~Gs~a~~~al~ 134 (285)
|++++||.++ +.++.+|+|.+|+.+++... .. ...++...+|++.+++++ +.+.++|++||++|++.|++
T Consensus 53 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik 132 (476)
T 3i5t_A 53 GRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALR 132 (476)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHH
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHH
Confidence 4566666544 23568999999998876531 12 245677899999999998 46778999999999999999
Q ss_pred Hcccc------CC-CeEEe-cCCcceeeeccccccccccccc-----ccceeeeeeecCCCC-CCC--------HHHHHH
Q psy5413 135 THCDR------RD-SEIIV-GDCSHIMLWEQGGASQTSVYSQ-----IGRVLMRGVTNQKDG-TFD--------LDEMEA 192 (285)
Q Consensus 135 ~~~~~------~g-~~vi~-~~~~h~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~-~~d--------~~~l~~ 192 (285)
+++.. ++ +.||+ ...||+++.........+.|.. ..+...+..|..... ..| +++|++
T Consensus 133 ~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~ 212 (476)
T 3i5t_A 133 FSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFED 212 (476)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHH
Confidence 98743 33 35554 5677877643222221122211 123333333321111 112 789999
Q ss_pred HhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-----hhcc-cCCeE--EEec
Q psy5413 193 KFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-----EVCA-SVDTV--MFCL 264 (285)
Q Consensus 193 ~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-----~~~~-~~dv~--~~s~ 264 (285)
++++. +.+++++|++|+++|++|..+++.++|++|+++|++||++||+||+|+++. ...+ ..++. +.++
T Consensus 213 ~i~~~---~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~ 289 (476)
T 3i5t_A 213 RIESL---GPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITF 289 (476)
T ss_dssp HHHHH---CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEE
T ss_pred HHHhc---CCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhh
Confidence 88641 113789999999999985578899999999999999999999999988441 1223 33333 5578
Q ss_pred ccccCc--ceeEEeecCccccc
Q psy5413 265 SKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 265 sK~l~~--p~gg~~~~~~~~i~ 284 (285)
+|++++ ...|++++++++++
T Consensus 290 sK~l~~G~~plg~v~~~~~i~~ 311 (476)
T 3i5t_A 290 AKGVTSGYVPLGGLAISEAVLA 311 (476)
T ss_dssp CGGGGTTSSCCEEEEECHHHHH
T ss_pred hhhhcCCCcCeEEEEECHHHHH
Confidence 899976 23345556666653
No 70
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.89 E-value=2.9e-22 Score=182.43 Aligned_cols=211 Identities=17% Similarity=0.084 Sum_probs=143.2
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCCCCcc-CChhHHHHHHHHHhHcC-CCcEEEcCChHHHHHHHHHHccc
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGDDVYL-EDPTCKELQEKAAKLAG-KEAAIFVPSGTMGNLIAIMTHCD 138 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~~~y~-~~~~~~~l~~~la~~~g-~~~~~~~~~Gs~a~~~al~~~~~ 138 (285)
|++++||.++. .++.+|++.+++.+++.....|+ .++...++++.++++++ .+.++|++||++|++.+++++..
T Consensus 51 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~ 130 (427)
T 3fq8_A 51 GNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRA 130 (427)
T ss_dssp SCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 56788887654 23479999999998775432222 56778999999999984 56789999999999999987653
Q ss_pred cCC-CeEEe-cCCcceeeeccccccccccc----ccccc------eeeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 139 RRD-SEIIV-GDCSHIMLWEQGGASQTSVY----SQIGR------VLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 139 ~~g-~~vi~-~~~~h~~~~~~~~~~~~~~~----~~~~g------~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
.++ ++|++ ...+|+.+............ ....+ ..+..++. .|+++|++++++ +.++++
T Consensus 131 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~----~~~~~~ 201 (427)
T 3fq8_A 131 YTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-----NDLEAVKALFAE----NPGEIA 201 (427)
T ss_dssp HHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-----TCHHHHHHHHHH----STTTEE
T ss_pred hhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-----CCHHHHHHHHHh----CCCCEE
Confidence 333 45555 56667655432222100000 00001 11223332 189999999976 344789
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----hhhcccCCeE--EEecccccCc-ceeEEeecC
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----AEVCASVDTV--MFCLSKGLGA-PVGSILAGP 279 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----~~~~~~~dv~--~~s~sK~l~~-p~gg~~~~~ 279 (285)
+|+++++++++|....+.+++++|+++|++||++||+||+|+++ ....+..++. +.++||++++ .+.|+++++
T Consensus 202 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~~G~~~~~ 281 (427)
T 3fq8_A 202 GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLTTLGKIIGGGLPVGAYGGK 281 (427)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEEEECGGGGTTSSCEEEEEC
T ss_pred EEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCChhhhhhhhhCCcceEEEEEc
Confidence 99999999988555666888999999999999999999999854 1111222222 5688899986 445667777
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 282 ~~~~~ 286 (427)
T 3fq8_A 282 REIMQ 286 (427)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 77665
No 71
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.89 E-value=1.3e-22 Score=185.78 Aligned_cols=215 Identities=11% Similarity=0.077 Sum_probs=143.2
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccC--CC--CccCChhHHHHHHHHHhHcC---CCcEEEcCChHHHHHHHH
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVG--DD--VYLEDPTCKELQEKAAKLAG---KEAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~--~~--~y~~~~~~~~l~~~la~~~g---~~~~~~~~~Gs~a~~~al 133 (285)
|++|+||.++ +.++.||+|.+|+.+++.. +. .+.+.+...+|.++|+++.. .+.++|++|||+|++.|+
T Consensus 63 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~Al 142 (456)
T 4atq_A 63 GNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAV 142 (456)
T ss_dssp SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHH
Confidence 5666666433 4577999999999987653 22 22345667889999999974 446799999999999999
Q ss_pred HHccccCCCe-EEe-cCCcceeeecccccccc-ccccccc---ceeeeeeecCC------CCCCCHHHHHHHhcccc-cc
Q psy5413 134 MTHCDRRDSE-IIV-GDCSHIMLWEQGGASQT-SVYSQIG---RVLMRGVTNQK------DGTFDLDEMEAKFSTAD-NI 200 (285)
Q Consensus 134 ~~~~~~~g~~-vi~-~~~~h~~~~~~~~~~~~-~~~~~~~---g~~~~~~~~~~------~~~~d~~~l~~~i~~~~-~~ 200 (285)
+++...+++. |+. ...||+.+.....+... ..+...+ ...+..+|... ....+.+.+++.++... ..
T Consensus 143 klAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 222 (456)
T 4atq_A 143 KVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQI 222 (456)
T ss_dssp HHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhh
Confidence 9998666654 333 57889877543222211 1121111 12233333211 11123444444432210 11
Q ss_pred cCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh-----hhhcccCCeE--EEecccccCc--c
Q psy5413 201 HCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL-----AEVCASVDTV--MFCLSKGLGA--P 271 (285)
Q Consensus 201 ~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~-----~~~~~~~dv~--~~s~sK~l~~--p 271 (285)
+++++++|++|++++..|....|++++++|+++|++||++||+||+++++ ....++.++. +.+++|.+++ |
T Consensus 223 ~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg~P 302 (456)
T 4atq_A 223 GGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGGLP 302 (456)
T ss_dssp CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSS
T ss_pred cCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCcCC
Confidence 34489999999999988666677899999999999999999999998843 3444566665 6777899988 8
Q ss_pred eeEEeecC
Q psy5413 272 VGSILAGP 279 (285)
Q Consensus 272 ~gg~~~~~ 279 (285)
+|+++..+
T Consensus 303 ~~av~~~~ 310 (456)
T 4atq_A 303 LSAITGRA 310 (456)
T ss_dssp CEEEEEEH
T ss_pred ceeeEecH
Confidence 88766553
No 72
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.89 E-value=2.1e-22 Score=181.70 Aligned_cols=198 Identities=14% Similarity=0.053 Sum_probs=150.5
Q ss_pred eeeccCCcCCCcHHHHHHHHhcccCC-----CCcc----CChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHc-
Q psy5413 69 VDIRSDTISKPTMEMKNYMFNCEVGD-----DVYL----EDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTH- 136 (285)
Q Consensus 69 ~~~~~~~~~~~~~~v~~a~~~~~~~~-----~~y~----~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~- 136 (285)
+.|........++++.+++.+..... ..|. ..+...++++.+++++|.+ .+++++||++++..+++++
T Consensus 28 ~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~ 107 (406)
T 3cai_A 28 VHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASS 107 (406)
T ss_dssp EECBGGGCCCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTG
T ss_pred EEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHh
Confidence 44444444567889999988765421 1232 2456889999999999976 5789999999999999876
Q ss_pred -cccCCCeEEecCCcceeeecccc-cccccccccccceeeeeeecC-CCCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 137 -CDRRDSEIIVGDCSHIMLWEQGG-ASQTSVYSQIGRVLMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 137 -~~~~g~~vi~~~~~h~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
..++|++|+++.+.|........ +. ...|.+++.++.+ +++.+|+++|++++++ ++++|+++++
T Consensus 108 ~~~~~gd~vi~~~~~~~~~~~~~~~~~------~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~~ 174 (406)
T 3cai_A 108 SRAGLGYEVIVSRLDDEANIAPWLRAA------HRYGAKVKWAEVDIETGELPTWQWESLISK-------STRLVAVNSA 174 (406)
T ss_dssp GGGBTTCEEEEETTSCGGGTHHHHHHH------HHHBCEEEEECCCTTTCCCCGGGHHHHCCT-------TEEEEEEESB
T ss_pred hccCCCCEEEEcCCccHHHHHHHHHHH------HhcCCeEEEEecCcccCCcCHHHHHHHhCC-------CceEEEEeCC
Confidence 12589999998888765432111 11 1247788888876 5677899999999977 7999999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-C---hhhhcccCCeEEEecccccCcceeE-EeecCccccc
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-P---LAEVCASVDTVMFCLSKGLGAPVGS-ILAGPEEFIQ 284 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~---~~~~~~~~dv~~~s~sK~l~~p~gg-~~~~~~~~i~ 284 (285)
+|++ |.++| +++|.++|+++|+++|+||+|+ + ......+.|+++.|+||++|+. +| +++.++++++
T Consensus 175 ~npt-G~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~-~G~~~~~~~~~~~ 245 (406)
T 3cai_A 175 SGTL-GGVTD---LRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMN 245 (406)
T ss_dssp CTTT-CBBCC---CHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCS-CEEEEESCHHHHH
T ss_pred cCCc-cccCC---HHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCC-cCeEEEEehHHHh
Confidence 9999 89999 8999999999999999999987 2 1111236899999999988754 66 8888877653
No 73
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.89 E-value=4.5e-22 Score=179.18 Aligned_cols=206 Identities=13% Similarity=0.080 Sum_probs=144.8
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCC-C--CccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHcc
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGD-D--VYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~-~--~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~ 137 (285)
|++++||.++. .++++|++.+++.++.... . ....++...++++.+++++|.+.+++++||++|++.+++++.
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~ 114 (395)
T 3nx3_A 35 AKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTAR 114 (395)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHH
T ss_pred CCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHH
Confidence 56788887652 3347899999998876532 1 123567899999999999998889999999999999999876
Q ss_pred cc------CCCeEEec-CCcceeeecccccccccccc---cccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEE
Q psy5413 138 DR------RDSEIIVG-DCSHIMLWEQGGASQTSVYS---QIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 138 ~~------~g~~vi~~-~~~h~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
.. .+++|++. ..+|.+............+. ...+..+..++. .|+++|++++++ ++++
T Consensus 115 ~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~-------~~~~ 182 (395)
T 3nx3_A 115 KYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-----NDISSVEKLVNE-------KTCA 182 (395)
T ss_dssp HHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-----TCHHHHHTTCCT-------TEEE
T ss_pred HHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-----CCHHHHHHhccC-------CeEE
Confidence 42 35667664 55566543322222111111 011223334443 289999999976 8999
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcccCCe--EEEecccccCc-ceeEEeecC
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCASVDT--VMFCLSKGLGA-PVGSILAGP 279 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~~~dv--~~~s~sK~l~~-p~gg~~~~~ 279 (285)
|++++++|++|+...+.+++++|+++|++||++||+||+|+++.. .....++ -+.++||++++ .+.|+++.+
T Consensus 183 v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~~G~~~~~ 262 (395)
T 3nx3_A 183 IILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVIN 262 (395)
T ss_dssp EEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTTTSCCEEEEEC
T ss_pred EEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccCCCceEEEEEc
Confidence 999999999877789999999999999999999999999884321 1122222 25678899876 445566666
Q ss_pred ccc
Q psy5413 280 EEF 282 (285)
Q Consensus 280 ~~~ 282 (285)
+++
T Consensus 263 ~~~ 265 (395)
T 3nx3_A 263 QKV 265 (395)
T ss_dssp HHH
T ss_pred hhh
Confidence 665
No 74
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.89 E-value=1.4e-22 Score=183.06 Aligned_cols=206 Identities=16% Similarity=0.110 Sum_probs=151.4
Q ss_pred CCeeeeeccCCcCC---CcHHHHHHHHhcccC----CCCccCChhHHHHHHHHHhHc----C----CCcEEEcCChHHHH
Q psy5413 65 NIRTVDIRSDTISK---PTMEMKNYMFNCEVG----DDVYLEDPTCKELQEKAAKLA----G----KEAAIFVPSGTMGN 129 (285)
Q Consensus 65 ~~~~~~~~~~~~~~---~~~~v~~a~~~~~~~----~~~y~~~~~~~~l~~~la~~~----g----~~~~~~~~~Gs~a~ 129 (285)
|+.++||.++.+.. +++++.+++.++... .. |+......++++.+++++ | .+.+++++||++|+
T Consensus 33 g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~ 111 (407)
T 2zc0_A 33 GVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGAL 111 (407)
T ss_dssp SCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHH
T ss_pred CCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHH
Confidence 45789998766542 677899988776542 23 665556789999999998 7 24568999999999
Q ss_pred HHHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEE-
Q psy5413 130 LIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLV- 208 (285)
Q Consensus 130 ~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v- 208 (285)
..++++++ ++|++|++..++|....... ...|.+++.++.++++ +|+++|+++++.... .+.++++|
T Consensus 112 ~~~~~~~~-~~gd~vl~~~p~~~~~~~~~---------~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~-~~~~~~~v~ 179 (407)
T 2zc0_A 112 DLLGRVLI-DPGDVVITENPSYINTLLAF---------EQLGAKIEGVPVDNDG-MRVDLLEEKIKELKA-KGQKVKLIY 179 (407)
T ss_dssp HHHHHHHC-CTTCEEEEEESCCHHHHHHH---------HTTTCEEEEEEEETTE-ECHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHHHHHhc-CCCCEEEEeCCChHHHHHHH---------HHcCCEEEEcccCCCC-CCHHHHHHHHHhhhc-ccCCceEEE
Confidence 99999987 58999998877765443321 2347788888875544 899999999971000 01267887
Q ss_pred EEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc--c--cCCeEEEecccccCc-ceeEEe
Q psy5413 209 CVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC--A--SVDTVMFCLSKGLGA-PVGSIL 276 (285)
Q Consensus 209 ~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~--~--~~dv~~~s~sK~l~~-p~gg~~ 276 (285)
++++++||+ |.++|.+++++|+++|++||+++|+||+|..+. .+. . +.++++.|+||+++. .++|++
T Consensus 180 ~~~~~~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~ 258 (407)
T 2zc0_A 180 TIPTGQNPM-GVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWI 258 (407)
T ss_dssp ECCSSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEE
T ss_pred ECCCCCCCC-CcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEE
Confidence 467899999 899999999999999999999999999988321 111 1 122458999999984 357788
Q ss_pred ecCccccc
Q psy5413 277 AGPEEFIQ 284 (285)
Q Consensus 277 ~~~~~~i~ 284 (285)
+.++++++
T Consensus 259 ~~~~~~~~ 266 (407)
T 2zc0_A 259 IAEGEILK 266 (407)
T ss_dssp ECCHHHHH
T ss_pred ecCHHHHH
Confidence 88777653
No 75
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.89 E-value=1.7e-22 Score=185.18 Aligned_cols=232 Identities=13% Similarity=0.100 Sum_probs=146.4
Q ss_pred CccccccccccccccCCCCCccceeeccCCccccccccCCeeeeeccC----CcCCCcHHHHHHHHhcccCCC----Ccc
Q psy5413 27 PALVESTPLSRSWSDNGNLSIPAMYCWLLPVPLRLGKVNIRTVDIRSD----TISKPTMEMKNYMFNCEVGDD----VYL 98 (285)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~~----~y~ 98 (285)
|..++++.+.+.|+.. |++++||.++ +.++.+|++.+++.+++.... ...
T Consensus 27 p~~~~~g~G~~v~d~~----------------------g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~ 84 (448)
T 3dod_A 27 PLIIESGTGIKVKDIN----------------------GKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGM 84 (448)
T ss_dssp CCEEEEEEBTEEEETT----------------------SCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSS
T ss_pred CceEEEeeeCEEEECC----------------------CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccccc
Confidence 5556666666666643 4566776653 345678999999998776421 223
Q ss_pred CChhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHHHHHcccc---CC----CeEEec-CCcceeeeccccccccccccc
Q psy5413 99 EDPTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIAIMTHCDR---RD----SEIIVG-DCSHIMLWEQGGASQTSVYSQ 168 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~al~~~~~~---~g----~~vi~~-~~~h~~~~~~~~~~~~~~~~~ 168 (285)
..+...++++.++++++ .+.++|++||++|++.|+++++.. +| ++|++. ..||+++.....+.....+..
T Consensus 85 ~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 164 (448)
T 3dod_A 85 TNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHH 164 (448)
T ss_dssp EEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC---------------------
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccc
Confidence 45678899999999984 467899999999999999998753 55 677764 556766543222221111111
Q ss_pred cc---ceeeeeeecCCCCC-----------CCHHHHHHHhcccccccCCceEEEEEeccc-CCCCeeeCCHHHHHHHHHH
Q psy5413 169 IG---RVLMRGVTNQKDGT-----------FDLDEMEAKFSTADNIHCASTSLVCVENTH-NYCGGTVLPMQWLRELKAR 233 (285)
Q Consensus 169 ~~---g~~~~~~~~~~~~~-----------~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~-n~~gG~~~~~~~l~~i~~l 233 (285)
.+ ...+..++.+..+. .|+++|+++|+. +.+++++|++++++ |++|+.+.+.+++++|+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~----~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l 240 (448)
T 3dod_A 165 VYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEE----HHEEIAALSIESMVQGASGMIVMPEGYLAGVREL 240 (448)
T ss_dssp --------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHH----HGGGEEEEEEESSEESTTTCEECCTTHHHHHHHH
T ss_pred cccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHh----CCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHH
Confidence 11 11233344322221 258999999973 22378999999998 8886788899999999999
Q ss_pred HHHcCCeEEEeCccCChh-----hhcccCCeE--EEecccccCc--ceeEEeecCccccc
Q psy5413 234 CQEHNIPVHMDGARLPLA-----EVCASVDTV--MFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 234 a~~~gi~li~Dea~~~~~-----~~~~~~dv~--~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
|++||++||+||+|+++. ......++. +.+++|++++ ...|++++++++++
T Consensus 241 ~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~~~~~~~ 300 (448)
T 3dod_A 241 CTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYK 300 (448)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEEEHHHHH
T ss_pred HHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceEEEEECHHHHH
Confidence 999999999999988432 122222322 5678899875 14456666666654
No 76
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.88 E-value=2.7e-22 Score=178.96 Aligned_cols=192 Identities=13% Similarity=0.079 Sum_probs=148.1
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHcC--------CCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLAG--------KEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~Gs~a~~~al~ 134 (285)
|+.+++|..+.+.. .++.+.+++.+.... ...|+......++++.++++++ .+.+++++||++|+..+++
T Consensus 28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~ 107 (370)
T 2z61_A 28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALS 107 (370)
T ss_dssp TCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHH
Confidence 46778998877764 567899998877653 3456655567889999999874 2457999999999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEeccc
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTH 214 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~ 214 (285)
+++ ++|++|++.+++|....... ...|.+++.++ +|+++|++++++ ++++|++++|+
T Consensus 108 ~~~-~~gd~vl~~~p~~~~~~~~~---------~~~g~~~~~v~------~d~~~l~~~l~~-------~~~~v~~~~p~ 164 (370)
T 2z61_A 108 SII-DDGDEVLIQNPCYPCYKNFI---------RFLGAKPVFCD------FTVESLEEALSD-------KTKAIIINSPS 164 (370)
T ss_dssp HHC-CTTCEEEEESSCCTHHHHHH---------HHTTCEEEEEC------SSHHHHHHHCCS-------SEEEEEEESSC
T ss_pred Hhc-CCCCEEEEeCCCchhHHHHH---------HHcCCEEEEeC------CCHHHHHHhccc-------CceEEEEcCCC
Confidence 986 68999999888775543321 23477777776 599999999976 78999999999
Q ss_pred CCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh------hhc-----ccCCeEEEecccccCc--ceeEEeecCcc
Q psy5413 215 NYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA------EVC-----ASVDTVMFCLSKGLGA--PVGSILAGPEE 281 (285)
Q Consensus 215 n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------~~~-----~~~dv~~~s~sK~l~~--p~gg~~~~~~~ 281 (285)
||+ |.++| ++ |+++|++||+++|+||+|.... .+. .+.|+++.|+||+++. .+.|+++++++
T Consensus 165 npt-G~~~~---~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 239 (370)
T 2z61_A 165 NPL-GEVID---RE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDE 239 (370)
T ss_dssp TTT-CCCCC---HH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHH
T ss_pred CCc-CcccC---HH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHH
Confidence 999 89999 45 9999999999999999988221 111 2446779999999974 45678888777
Q ss_pred ccc
Q psy5413 282 FIQ 284 (285)
Q Consensus 282 ~i~ 284 (285)
+++
T Consensus 240 ~~~ 242 (370)
T 2z61_A 240 IIE 242 (370)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 77
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.88 E-value=4.7e-22 Score=181.39 Aligned_cols=197 Identities=17% Similarity=0.186 Sum_probs=152.9
Q ss_pred CcHHHHHHHHhcccC------CCCcc-CChhHHHHHHHHHhHcCCCcEEE---cCChHHHHHHHHHHccccCCCeEEecC
Q psy5413 79 PTMEMKNYMFNCEVG------DDVYL-EDPTCKELQEKAAKLAGKEAAIF---VPSGTMGNLIAIMTHCDRRDSEIIVGD 148 (285)
Q Consensus 79 ~~~~v~~a~~~~~~~------~~~y~-~~~~~~~l~~~la~~~g~~~~~~---~~~Gs~a~~~al~~~~~~~g~~vi~~~ 148 (285)
.++++++++.+...+ ...|. .++...++++.+++++|.+..++ ++||++|+..++.+++ ++||+|++..
T Consensus 36 n~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~-~~Gd~Vl~~~ 114 (431)
T 3ht4_A 36 NQFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGIL-RPGDELLYIT 114 (431)
T ss_dssp HHHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTC-CTTCEEEECS
T ss_pred HHHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhC-CCCCEEEEeC
Confidence 367888888775432 12222 34668899999999999987754 6799999999999877 6999999887
Q ss_pred -Ccceeeecccccccc-cccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEec-ccCCCCeeeCCHH
Q psy5413 149 -CSHIMLWEQGGASQT-SVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVEN-THNYCGGTVLPMQ 225 (285)
Q Consensus 149 -~~h~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~-~~n~~gG~~~~~~ 225 (285)
+.|..+.....+..+ .......|.+++.++.++++.+|+++|++++++ ++++|++++ ++|++ |...+.+
T Consensus 115 ~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~-------~tk~V~i~~sp~np~-~~~~~~~ 186 (431)
T 3ht4_A 115 GKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHS-------NTKMIGIQRSKGYAT-RPSFTIS 186 (431)
T ss_dssp SSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCT-------TEEEEEEECSCTTSS-SCCCCHH
T ss_pred CCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCC-------CCeEEEEECCCCCCC-CCcCCHH
Confidence 666554432211000 000134688999999877888999999999987 899999995 88888 8889999
Q ss_pred HHHHHHHHHHH--cCCeEEEeCccCChh----hhcccCCeEEEecccccCc---ceeEEeecCccccc
Q psy5413 226 WLRELKARCQE--HNIPVHMDGARLPLA----EVCASVDTVMFCLSKGLGA---PVGSILAGPEEFIQ 284 (285)
Q Consensus 226 ~l~~i~~la~~--~gi~li~Dea~~~~~----~~~~~~dv~~~s~sK~l~~---p~gg~~~~~~~~i~ 284 (285)
++++|+++|++ +|+++|+||+|+... ....++|+++.|++|++++ +.||++++++++++
T Consensus 187 ~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~ 254 (431)
T 3ht4_A 187 QIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVE 254 (431)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHH
T ss_pred HHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccccCCeEEEcCccccCCCCCCCceEEEEecHHHHH
Confidence 99999999999 999999999988332 2334689999999999887 78899999887764
No 78
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.88 E-value=1.8e-22 Score=180.28 Aligned_cols=188 Identities=12% Similarity=0.000 Sum_probs=143.2
Q ss_pred cCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC---cE-EEcCChHHHHHHHHHHccccCCCeEEecCC-c
Q psy5413 76 ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE---AA-IFVPSGTMGNLIAIMTHCDRRDSEIIVGDC-S 150 (285)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~---~~-~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~-~ 150 (285)
+...++++++++.++...+......+...++++.+++++|.+ .. ++++||++|++.++++++ ++||+|++..+ +
T Consensus 27 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~-~~gd~vi~~~~~~ 105 (376)
T 3f0h_A 27 PVMSSEEVRAIGAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF-TKKDKVLVIDGGS 105 (376)
T ss_dssp SCCCCHHHHHHHTSCCCCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC-CTTCCEEEEESSH
T ss_pred CCCCcHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc-CCCCeEEEEeCCh
Confidence 456789999999887654322222355788999999999875 34 458889999999999987 68999888765 3
Q ss_pred ceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHH
Q psy5413 151 HIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLREL 230 (285)
Q Consensus 151 h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i 230 (285)
|... ..... ...|.+++.++.++++.+|++++++++++ ++++|++++++|++ |.++| +++|
T Consensus 106 ~~~~--~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~~~~-------~~~~v~~~~~~npt-G~~~~---l~~i 166 (376)
T 3f0h_A 106 FGHR--FVQLC------EIHEIPYVALKLEHGKKLTKEKLYEYDNQ-------NFTGLLVNVDETST-AVLYD---TMMI 166 (376)
T ss_dssp HHHH--HHHHH------HHTTCCEEEEECCTTCCCCHHHHHTTTTS-------CCCEEEEESEETTT-TEECC---HHHH
T ss_pred hhHH--HHHHH------HHcCCceEEEeCCCCCCCCHHHHHHhhcc-------CceEEEEecccCCc-ceecC---HHHH
Confidence 3321 11122 34577888888867778999999998866 78999999999999 89999 9999
Q ss_pred HHHHHHcCCeEEEeCccCChh---hh-cccCCeEEEecccccCc-ceeEEeecCcccc
Q psy5413 231 KARCQEHNIPVHMDGARLPLA---EV-CASVDTVMFCLSKGLGA-PVGSILAGPEEFI 283 (285)
Q Consensus 231 ~~la~~~gi~li~Dea~~~~~---~~-~~~~dv~~~s~sK~l~~-p~gg~~~~~~~~i 283 (285)
+++|++||+++|+|++++... .. ..++|+++.++||++++ +-.|+++.+++++
T Consensus 167 ~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~ 224 (376)
T 3f0h_A 167 GEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGV 224 (376)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHH
T ss_pred HHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHH
Confidence 999999999999999988221 11 23579999999999995 3346677776654
No 79
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.88 E-value=4.2e-22 Score=182.30 Aligned_cols=207 Identities=14% Similarity=0.063 Sum_probs=144.8
Q ss_pred cCCeeeeeccCCc----CCCcHHHHHHHHhcccCCC----CccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHH
Q psy5413 64 VNIRTVDIRSDTI----SKPTMEMKNYMFNCEVGDD----VYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 64 ~~~~~~~~~~~~~----~~~~~~v~~a~~~~~~~~~----~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~ 135 (285)
.|++++||.++.. ++++|++.+++.++..... .| ..+...++++.+++++|.+.+++++||++|++.++++
T Consensus 74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~ 152 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKL 152 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHH
Confidence 3678899987532 3489999999988775321 23 3456899999999999988899999999999999998
Q ss_pred ccc--------cCC-CeEEec-CCcceeeecccccccccccccccc---eeeeeeecCCCCCCCHHHHHHHhcccccccC
Q psy5413 136 HCD--------RRD-SEIIVG-DCSHIMLWEQGGASQTSVYSQIGR---VLMRGVTNQKDGTFDLDEMEAKFSTADNIHC 202 (285)
Q Consensus 136 ~~~--------~~g-~~vi~~-~~~h~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~ 202 (285)
++. .+| ++|++. ..+|..+.........+.+...++ ..++.++. .|+++|+++|+..
T Consensus 153 ~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~----- 222 (439)
T 2oat_A 153 ARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDP----- 222 (439)
T ss_dssp HHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-----SCHHHHHHHTTST-----
T ss_pred HHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-----CCHHHHHHHhCCC-----
Confidence 752 245 667765 466766543222220000101111 23344443 2899999999521
Q ss_pred CceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcc----cCCeEEEecccccCcc--
Q psy5413 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCA----SVDTVMFCLSKGLGAP-- 271 (285)
Q Consensus 203 ~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~----~~dv~~~s~sK~l~~p-- 271 (285)
++++|+++++++++|..+++.+++++|+++|++||++||+||+|+++.. ..+ ..|+ .|++|++++.
T Consensus 223 -~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di--~t~sK~l~~G~~ 299 (439)
T 2oat_A 223 -NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDI--VLLGKALSGGLY 299 (439)
T ss_dssp -TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE--EEECGGGGTTSS
T ss_pred -CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcE--EEecccccCCCC
Confidence 7899999999888733567889999999999999999999999984321 111 2354 4888999873
Q ss_pred eeEEeecCccccc
Q psy5413 272 VGSILAGPEEFIQ 284 (285)
Q Consensus 272 ~gg~~~~~~~~i~ 284 (285)
.+|++++++++++
T Consensus 300 ~~G~v~~~~~~~~ 312 (439)
T 2oat_A 300 PVSAVLCDDDIML 312 (439)
T ss_dssp CCEEEEECHHHHT
T ss_pred CeEEEEECHHHHh
Confidence 4667777777654
No 80
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.88 E-value=5.1e-22 Score=180.93 Aligned_cols=211 Identities=15% Similarity=0.080 Sum_probs=138.2
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCCCC-ccCChhHHHHHHHHHhHc-CCCcEEEcCChHHHHHHHHHHccc
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGDDV-YLEDPTCKELQEKAAKLA-GKEAAIFVPSGTMGNLIAIMTHCD 138 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~~~-y~~~~~~~~l~~~la~~~-g~~~~~~~~~Gs~a~~~al~~~~~ 138 (285)
|++++||.++. .++.+|++.+++.+++..... ..+++...++++.+++++ +.+.++|++||++|++.+++++..
T Consensus 52 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~ 131 (429)
T 4e77_A 52 GKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARG 131 (429)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHH
Confidence 56777776553 245799999999988764322 235678899999999998 567789999999999999997653
Q ss_pred cC-CCeEEe-cCCcceeeeccccccc-------ccccc---cccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 139 RR-DSEIIV-GDCSHIMLWEQGGASQ-------TSVYS---QIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 139 ~~-g~~vi~-~~~~h~~~~~~~~~~~-------~~~~~---~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
.+ ++.|++ ...+|+.+........ .+... ......+..++. .|+++|++++++ +.++++
T Consensus 132 ~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~----~~~~~~ 202 (429)
T 4e77_A 132 YTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY-----NDLASVRQAFEQ----YPQEVA 202 (429)
T ss_dssp HHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT-----TCHHHHHHHHHH----STTTEE
T ss_pred hhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC-----CCHHHHHHHHHh----cCCCEE
Confidence 22 344554 5677776642221110 00000 001111222222 289999999975 234789
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----hhhcccCCeE--EEecccccCc-ceeEEeecC
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----AEVCASVDTV--MFCLSKGLGA-PVGSILAGP 279 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----~~~~~~~dv~--~~s~sK~l~~-p~gg~~~~~ 279 (285)
+|+++++++.+|....+.+++++|+++|++||++||+||+|+++ ....+..++. +.|+||++++ ..+|+++++
T Consensus 203 ~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~t~sK~~~~G~~~G~~~~~ 282 (429)
T 4e77_A 203 CIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLTCLGKIIGGGMPVGAFGGR 282 (429)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEEEEEGGGGTTSCCEEEEEC
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcchHHHhcCCCCCeeeecccccCCCCeEEEEEC
Confidence 99999888877455556889999999999999999999999844 1111222221 4688899986 345567777
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 283 ~~~~~ 287 (429)
T 4e77_A 283 REVMN 287 (429)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 77664
No 81
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.88 E-value=1.3e-22 Score=186.08 Aligned_cols=207 Identities=12% Similarity=0.058 Sum_probs=154.7
Q ss_pred CCeeeeeccCCcCC---CcHHHHHHHHhcccCC----CCccCChhHHHHHHHHHhHc----CC---CcEEEcCChHHHHH
Q psy5413 65 NIRTVDIRSDTISK---PTMEMKNYMFNCEVGD----DVYLEDPTCKELQEKAAKLA----GK---EAAIFVPSGTMGNL 130 (285)
Q Consensus 65 ~~~~~~~~~~~~~~---~~~~v~~a~~~~~~~~----~~y~~~~~~~~l~~~la~~~----g~---~~~~~~~~Gs~a~~ 130 (285)
++.+++|..+.+.. +++++.+++.+.+... ..|+..+...+|++.+++++ |. +.+++++||++|+.
T Consensus 75 ~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~ 154 (448)
T 3aow_A 75 TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALD 154 (448)
T ss_dssp TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHH
T ss_pred CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHH
Confidence 35689998877653 6778999888765432 35666566889999999998 75 45799999999999
Q ss_pred HHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEE-
Q psy5413 131 IAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVC- 209 (285)
Q Consensus 131 ~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~- 209 (285)
.++++++ ++||+|++..++|...... . ...|.+++.++.++++ +|+++|+++++.. .....++++|+
T Consensus 155 ~~~~~l~-~~Gd~Vlv~~p~y~~~~~~---~------~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~-~~~~~~~k~v~~ 222 (448)
T 3aow_A 155 LIGRVFL-NPGDIVVVEAPTYLAALQA---F------NFYEPQYIQIPLDDEG-MKVEILEEKLKEL-KSQGKKVKVVYT 222 (448)
T ss_dssp HHHHHHC-CTTCEEEEEESCCHHHHHH---H------HTTCCEEEEEEEETTE-ECHHHHHHHHHHH-HHTTCCEEEEEE
T ss_pred HHHHHHc-CCCCEEEEeCCChHHHHHH---H------HHcCCEEEEeccCCCC-CCHHHHHHHHhhh-hccCCCCeEEEE
Confidence 9999987 5899999988776544331 1 2348888888875544 8999999999710 00012688885
Q ss_pred EecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----------hhc-ccCCeEEEecccccCc-ceeEEee
Q psy5413 210 VENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----------EVC-ASVDTVMFCLSKGLGA-PVGSILA 277 (285)
Q Consensus 210 i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----------~~~-~~~dv~~~s~sK~l~~-p~gg~~~ 277 (285)
+++++||| |.+++.+++++|+++|++||+++|+||+|..+. .+. .+.++++.|+||+++. .+.|+++
T Consensus 223 ~~~~~NPt-G~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~ 301 (448)
T 3aow_A 223 VPTFQNPA-GVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMV 301 (448)
T ss_dssp CCSSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEE
T ss_pred CCCCCCCc-CCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEE
Confidence 57799999 899999999999999999999999999987321 111 1234559999999984 4567888
Q ss_pred cCccccc
Q psy5413 278 GPEEFIQ 284 (285)
Q Consensus 278 ~~~~~i~ 284 (285)
+++++++
T Consensus 302 ~~~~l~~ 308 (448)
T 3aow_A 302 GDPGIIR 308 (448)
T ss_dssp ECHHHHH
T ss_pred eCHHHHH
Confidence 8777654
No 82
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.88 E-value=3.3e-22 Score=182.67 Aligned_cols=217 Identities=18% Similarity=0.136 Sum_probs=143.8
Q ss_pred CCeeeeeccCCc----CCCcHHHHHHHHhcccCCC----CccCChhHHHHHHHHHhHc--CC-CcEEEcCChHHHHHHHH
Q psy5413 65 NIRTVDIRSDTI----SKPTMEMKNYMFNCEVGDD----VYLEDPTCKELQEKAAKLA--GK-EAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 65 ~~~~~~~~~~~~----~~~~~~v~~a~~~~~~~~~----~y~~~~~~~~l~~~la~~~--g~-~~~~~~~~Gs~a~~~al 133 (285)
|++++||.++.+ ++.+|++.+++.+++.... ..+..+...++++.+++++ +. +.++|++||++|++.++
T Consensus 42 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al 121 (439)
T 3dxv_A 42 GRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAY 121 (439)
T ss_dssp SCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHH
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHH
Confidence 677889887665 3378999999988765432 2235677899999999998 55 57899999999999999
Q ss_pred HHccc-cCCCeEEe-cCCcceeeecccccccccc--ccccc---ceeeeeeecCCCCCC-----CHHHHHHHhccccccc
Q psy5413 134 MTHCD-RRDSEIIV-GDCSHIMLWEQGGASQTSV--YSQIG---RVLMRGVTNQKDGTF-----DLDEMEAKFSTADNIH 201 (285)
Q Consensus 134 ~~~~~-~~g~~vi~-~~~~h~~~~~~~~~~~~~~--~~~~~---g~~~~~~~~~~~~~~-----d~~~l~~~i~~~~~~~ 201 (285)
+++.. ..++.|++ ...+|.++.....+..... |...+ ...+..++.+..+.. |+++|++++++. +
T Consensus 122 ~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~ 198 (439)
T 3dxv_A 122 RAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAV---P 198 (439)
T ss_dssp HHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTS---C
T ss_pred HHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhc---C
Confidence 98632 13445554 6677776643322220000 11111 111233333222222 799999999410 2
Q ss_pred CCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-----hhcccCCeE--EEecccccCc-cee
Q psy5413 202 CASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-----EVCASVDTV--MFCLSKGLGA-PVG 273 (285)
Q Consensus 202 ~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-----~~~~~~dv~--~~s~sK~l~~-p~g 273 (285)
.+++++|++++++|++|+...+.+++++|+++|++||++||+||+|+++. ...+..++. +.|+||++++ .+.
T Consensus 199 ~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~~G~ri 278 (439)
T 3dxv_A 199 AGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGLPL 278 (439)
T ss_dssp TTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGGTTSCC
T ss_pred CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhcCCcce
Confidence 33799999999999986666778889999999999999999999998431 111222221 4488999987 445
Q ss_pred EEeecCccccc
Q psy5413 274 SILAGPEEFIQ 284 (285)
Q Consensus 274 g~~~~~~~~i~ 284 (285)
|++++++++++
T Consensus 279 G~~~~~~~~~~ 289 (439)
T 3dxv_A 279 SAVIAPAEILD 289 (439)
T ss_dssp EEEEEEHHHHT
T ss_pred EEEEECHHHHh
Confidence 67777777654
No 83
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.88 E-value=8.2e-23 Score=183.12 Aligned_cols=191 Identities=12% Similarity=0.063 Sum_probs=146.3
Q ss_pred CcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC---cEEEcCChHHHHHHHHHHccccCCCeEEecCCcc
Q psy5413 75 TISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE---AAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSH 151 (285)
Q Consensus 75 ~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~---~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h 151 (285)
.+...++++.+++.++..++..+...+...++++.++++++.+ .+++++||++|+..++++++ ++||+|++....|
T Consensus 30 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~-~~gd~vl~~~~~~ 108 (393)
T 3kgw_A 30 GPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLL-EPGDSFLTGTNGI 108 (393)
T ss_dssp SCCCCCHHHHHHTTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHC-CTTCEEEEEESSH
T ss_pred CCCCCCHHHHHHhcccccCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcC-CCCCEEEEEeCCc
Confidence 4466789999999876554332223456789999999999875 35899999999999999986 6899999876555
Q ss_pred eeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHH
Q psy5413 152 IMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELK 231 (285)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~ 231 (285)
.... ..... ...|.+++.++.++++.+|+++|+++++++ ++++|++++++||+ |.++| +++|+
T Consensus 109 ~~~~-~~~~~------~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~npt-G~~~~---l~~i~ 171 (393)
T 3kgw_A 109 WGMR-AAEIA------DRIGARVHQMIKKPGEHYTLQEVEEGLAQH------KPVLLFLVHGESST-GVVQP---LDGFG 171 (393)
T ss_dssp HHHH-HHHHH------HHTTCEEEEEECCTTCCCCHHHHHHHHHHH------CCSEEEEESEETTT-TEECC---CTTHH
T ss_pred hhHH-HHHHH------HHcCCceEEEeCCCCCCCCHHHHHHHHhhC------CCcEEEEeccCCcc-hhhcc---HHHHH
Confidence 3110 01122 345888888888777789999999999763 68999999999999 89999 99999
Q ss_pred HHHHHcCCeEEEeCccC-Chhh---hcccCCeEEEecccccCcc-eeEEeecCcccc
Q psy5413 232 ARCQEHNIPVHMDGARL-PLAE---VCASVDTVMFCLSKGLGAP-VGSILAGPEEFI 283 (285)
Q Consensus 232 ~la~~~gi~li~Dea~~-~~~~---~~~~~dv~~~s~sK~l~~p-~gg~~~~~~~~i 283 (285)
++|++||+++|+||+++ +... ...+.|+++.++||+++++ ..|+++.+++++
T Consensus 172 ~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~ 228 (393)
T 3kgw_A 172 ELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAK 228 (393)
T ss_dssp HHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHH
T ss_pred HHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHH
Confidence 99999999999999987 2211 1235789999999998763 346777666654
No 84
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.88 E-value=3.8e-22 Score=182.28 Aligned_cols=205 Identities=17% Similarity=0.119 Sum_probs=137.3
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccCCC----CccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVGDD----VYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~~----~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~ 136 (285)
|++++||.++ ..++++|++.+++.+++.... .| ..+...++++.+++++|.+.++|++||++|++.+++++
T Consensus 64 G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a 142 (433)
T 1z7d_A 64 DKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLC 142 (433)
T ss_dssp CCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHH
T ss_pred CCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHH
Confidence 6778888774 223489999999988775321 23 45678999999999999888999999999999999986
Q ss_pred cc--------cCC-CeEEecC-Ccceeeecccccccccccccccc---eeeeeeecCCCCCCCHHHHHHHhc-ccccccC
Q psy5413 137 CD--------RRD-SEIIVGD-CSHIMLWEQGGASQTSVYSQIGR---VLMRGVTNQKDGTFDLDEMEAKFS-TADNIHC 202 (285)
Q Consensus 137 ~~--------~~g-~~vi~~~-~~h~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~~~ 202 (285)
.. .+| ++|++.+ .+|.++...........+...++ ..+..+|. .|+++|+++++ +
T Consensus 143 ~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~------ 211 (433)
T 1z7d_A 143 RKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDP------ 211 (433)
T ss_dssp HHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTST------
T ss_pred HHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCC------
Confidence 42 256 7777654 56766543222220011111111 23344443 28999999994 4
Q ss_pred CceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcc----cCCeEEEecccccCcc--
Q psy5413 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCA----SVDTVMFCLSKGLGAP-- 271 (285)
Q Consensus 203 ~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~----~~dv~~~s~sK~l~~p-- 271 (285)
++++|+++++++++|..+++.+++++|+++|++||++||+||+|+++.. ..+ ..|+ .|++|++++.
T Consensus 212 -~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di--~t~sK~l~~G~~ 288 (433)
T 1z7d_A 212 -NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDV--ILLGKALSGGHY 288 (433)
T ss_dssp -TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE--EEECGGGGTTSS
T ss_pred -CEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCE--EEECccccCCCC
Confidence 7899999999888733457888999999999999999999999984321 112 2354 4888999863
Q ss_pred eeEEeecCccccc
Q psy5413 272 VGSILAGPEEFIQ 284 (285)
Q Consensus 272 ~gg~~~~~~~~i~ 284 (285)
.+|++++++++++
T Consensus 289 ~~G~v~~~~~~~~ 301 (433)
T 1z7d_A 289 PISAVLANDDIML 301 (433)
T ss_dssp CCEEEEECHHHHT
T ss_pred CeEEEEECHHHHh
Confidence 4667777777664
No 85
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.88 E-value=3e-22 Score=182.65 Aligned_cols=156 Identities=21% Similarity=0.205 Sum_probs=131.9
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecccc-cccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGG-ASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~~~~~~~g~~~~~~ 177 (285)
.+|...+|++.+++++|.+.+++++||++|+..++++++ ++||+|+++++.|..+..... .. ...|.+++.+
T Consensus 80 ~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~al~-~~Gd~Vi~~~~~y~~~~~~~~~~~------~~~G~~~~~v 152 (430)
T 3ri6_A 80 SNPTVEDLEQRLKNLTGALGVLALGSGMAAISTAILTLA-RAGDSVVTTDRLFGHTLSLFQKTL------PSFGIEVRFV 152 (430)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHTHH------HHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHHH------HHcCCEEEEe
Confidence 578899999999999999989999999999999999887 699999998888765443111 11 3458888888
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh---hhhc
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---AEVC 254 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---~~~~ 254 (285)
+.+ |+++++++|++ ++++|++++|+||+ |.+.| +++|+++|+++|+++|+|++++.. ....
T Consensus 153 ~~~-----d~~~l~~ai~~-------~t~~v~~e~p~Npt-G~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~~~~ 216 (430)
T 3ri6_A 153 DVM-----DSLAVEHACDE-------TTKLLFLETISNPQ-LQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLEAKR 216 (430)
T ss_dssp CTT-----CHHHHHHHCCT-------TEEEEEEESSCTTT-CCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCCGGG
T ss_pred CCC-----CHHHHHHhhCC-------CCeEEEEECCCCCC-CeecC---HHHHHHHHHHcCCEEEEECCCcccccCChHH
Confidence 764 89999999987 89999999999999 89999 999999999999999999998822 2234
Q ss_pred ccCCeEEEecccccCcc---eeEEee
Q psy5413 255 ASVDTVMFCLSKGLGAP---VGSILA 277 (285)
Q Consensus 255 ~~~dv~~~s~sK~l~~p---~gg~~~ 277 (285)
.++|+++.|++|+++++ +||+++
T Consensus 217 ~g~div~~S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 217 LGVDIEVLSSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp GTCSEEEEECCCEEETTEEECCEEEE
T ss_pred cCCEEEEECCcccccCCCCceEEEEE
Confidence 57899999999999984 888888
No 86
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.88 E-value=3e-22 Score=177.85 Aligned_cols=196 Identities=11% Similarity=0.017 Sum_probs=148.9
Q ss_pred CCeeeeeccC-CcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCC--CcEEEcCChHHHHHHHHHHccccCC
Q psy5413 65 NIRTVDIRSD-TISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGK--EAAIFVPSGTMGNLIAIMTHCDRRD 141 (285)
Q Consensus 65 ~~~~~~~~~~-~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~--~~~~~~~~Gs~a~~~al~~~~~~~g 141 (285)
+++++||.++ ++..++|++.+++.++......|. ++...++++.++++++. +.+++++||++|+..+++++
T Consensus 25 ~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~-~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----- 98 (361)
T 3ftb_A 25 GRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYP-DVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----- 98 (361)
T ss_dssp ---CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCC-CTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC-----
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCC-CccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc-----
Confidence 5788999876 444578899999887765444553 46679999999999985 45689999999999999986
Q ss_pred CeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeee
Q psy5413 142 SEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTV 221 (285)
Q Consensus 142 ~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~ 221 (285)
++|+++.++|...... . ...|.+++.++.++++.++++++++++++ +++|++++|+||+ |.+
T Consensus 99 d~vi~~~~~~~~~~~~---~------~~~g~~~~~~~~~~~~~~~~~~l~~~l~~--------~~~v~i~~p~npt-G~~ 160 (361)
T 3ftb_A 99 EKILIIVPSYAEYEIN---A------KKHGVSVVFSYLDENMCIDYEDIISKIDD--------VDSVIIGNPNNPN-GGL 160 (361)
T ss_dssp SEEEEEESCCTHHHHH---H------HHTTCEEEEEECCTTSCCCHHHHHHHTTT--------CSEEEEETTBTTT-TBC
T ss_pred CcEEEecCChHHHHHH---H------HHcCCeEEEeecCcccCCCHHHHHHhccC--------CCEEEEeCCCCCC-CCC
Confidence 7788887776544331 1 23488889998877767899999999853 6899999999999 899
Q ss_pred CCHHHHHHHHHHHHHcCCeEEEeCccCChhh--------hccc-CC-eEEEecccccCc--ceeEEee-cCccccc
Q psy5413 222 LPMQWLRELKARCQEHNIPVHMDGARLPLAE--------VCAS-VD-TVMFCLSKGLGA--PVGSILA-GPEEFIQ 284 (285)
Q Consensus 222 ~~~~~l~~i~~la~~~gi~li~Dea~~~~~~--------~~~~-~d-v~~~s~sK~l~~--p~gg~~~-~~~~~i~ 284 (285)
+|.+++++|+++|++||+++|+||+|+.+.. .... -+ +++.|+||+++. .+.|+++ .++++++
T Consensus 161 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~ 236 (361)
T 3ftb_A 161 INKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAA 236 (361)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHH
T ss_pred CCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHH
Confidence 9999999999999999999999999872211 1111 12 448899999874 4456665 7777653
No 87
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.88 E-value=3.5e-22 Score=183.24 Aligned_cols=200 Identities=15% Similarity=0.200 Sum_probs=150.8
Q ss_pred CCeeeeeccCC-cCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCe
Q psy5413 65 NIRTVDIRSDT-ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSE 143 (285)
Q Consensus 65 ~~~~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~ 143 (285)
+..++||.++. +....+++.+++.. +...|...+...+|++.++++++.+.+++++||++|++.++++++ ++||
T Consensus 41 ~~~ylD~~~~~~~~~~~~~~~~a~~~---~~~~y~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~-~~gd- 115 (456)
T 2ez2_A 41 KDIYIDLLTDSGTNAMSDKQWAGMMM---GDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAI-KPGQ- 115 (456)
T ss_dssp GGCSEECSCSSSCCCCCHHHHHHHTT---CCCCSSSCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHC-CTTC-
T ss_pred ccceeeeccccCCccCCHHHHHHhhc---chhhcccChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhC-CCCC-
Confidence 45678887653 34457888888863 235677788899999999999999999999999999999999986 6888
Q ss_pred EEecCCcc-eeeecccccccccccccccceeeeeeecCC----------CCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 144 IIVGDCSH-IMLWEQGGASQTSVYSQIGRVLMRGVTNQK----------DGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 144 vi~~~~~h-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
+++.++| ..+.... ...|.+++.++.++ ++.+|+++|+++|++.. ..++++|++++
T Consensus 116 -i~~~~~~~~~~~~~~---------~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t---~~~~~~v~l~~ 182 (456)
T 2ez2_A 116 -YVAGNMYFTTTRYHQ---------EKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKG---AENIAYICLAV 182 (456)
T ss_dssp -EEEESSCCHHHHHHH---------HHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHC---GGGEEEEEEES
T ss_pred -EeccccccchhHHHH---------HHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhcc---ccceeEEEEec
Confidence 5555555 5433221 23477777776542 25689999999997621 01359999999
Q ss_pred ccC-CCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC----------h--hh---------hcccCCeEEEecccccCc
Q psy5413 213 THN-YCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP----------L--AE---------VCASVDTVMFCLSKGLGA 270 (285)
Q Consensus 213 ~~n-~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~----------~--~~---------~~~~~dv~~~s~sK~l~~ 270 (285)
|+| ++ |.+++.+++++|+++|++||++||+||+|+. . .. .....|++++|++|+++.
T Consensus 183 p~n~pt-G~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~ 261 (456)
T 2ez2_A 183 TVNLAG-GQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLV 261 (456)
T ss_dssp SBTTTT-SBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCC
T ss_pred cCCCCC-CccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCC
Confidence 998 87 8999999999999999999999999999763 1 11 113468887788898665
Q ss_pred ceeEEeec-Ccccc
Q psy5413 271 PVGSILAG-PEEFI 283 (285)
Q Consensus 271 p~gg~~~~-~~~~i 283 (285)
++||++++ +++++
T Consensus 262 ~~gG~~~~~~~~~~ 275 (456)
T 2ez2_A 262 NIGGFLCMNDDEMF 275 (456)
T ss_dssp SSCEEEEESCHHHH
T ss_pred CceeEEEECCHHHH
Confidence 67888887 56654
No 88
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.88 E-value=4.8e-22 Score=180.56 Aligned_cols=189 Identities=12% Similarity=0.070 Sum_probs=143.3
Q ss_pred cCCcCCCcHHHHHHHHhcc-cCCCCcc--CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCC
Q psy5413 73 SDTISKPTMEMKNYMFNCE-VGDDVYL--EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDC 149 (285)
Q Consensus 73 ~~~~~~~~~~v~~a~~~~~-~~~~~y~--~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~ 149 (285)
+..+..+..+...++.+.. .+...|+ .++...++|+.+++++|.+.+++++||++|+..++++++ ++||+|+++.+
T Consensus 51 s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ssGt~Ai~~al~~l~-~~Gd~Vi~~~~ 129 (415)
T 2fq6_A 51 ASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFI-EQGDHVLMTNT 129 (415)
T ss_dssp CSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTC-CTTCEEEEETT
T ss_pred ccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCC
Confidence 3444445554443332222 2233444 578899999999999999888888999999999999877 68999999877
Q ss_pred cceeeeccc-ccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHH
Q psy5413 150 SHIMLWEQG-GASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLR 228 (285)
Q Consensus 150 ~h~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~ 228 (285)
.|..+.... ... ...|.++..++.. |+++++++|++ +|++|++++|+|++ |.++| ++
T Consensus 130 ~y~~~~~~~~~~l------~~~G~~v~~v~~~-----d~~~le~ai~~-------~tklV~~e~~~Npt-G~v~d---l~ 187 (415)
T 2fq6_A 130 AYEPSQDFCSKIL------SKLGVTTSWFDPL-----IGADIVKHLQP-------NTKIVFLESPGSIT-MEVHD---VP 187 (415)
T ss_dssp SCHHHHHHHHHTG------GGGTCEEEEECTT-----CGGGGGGGCCT-------TEEEEEEESSCTTT-CCCCC---HH
T ss_pred CchHHHHHHHHHH------HHcCcEEEEECCC-----CHHHHHHhhcc-------CCcEEEEECCCCCC-CEeec---HH
Confidence 765443211 111 2457788777652 88999999987 79999999999999 99999 99
Q ss_pred HHHHHHHH--cCCeEEEeCccCCh---hhhcccCCeEEEecccccCcc---eeEEeecCccccc
Q psy5413 229 ELKARCQE--HNIPVHMDGARLPL---AEVCASVDTVMFCLSKGLGAP---VGSILAGPEEFIQ 284 (285)
Q Consensus 229 ~i~~la~~--~gi~li~Dea~~~~---~~~~~~~dv~~~s~sK~l~~p---~gg~~~~~~~~i~ 284 (285)
+|+++|++ ||+++|+|++|+.. ..+..++|+++.|++|+++++ .+|++++++++++
T Consensus 188 ~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~ 251 (415)
T 2fq6_A 188 AIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWE 251 (415)
T ss_dssp HHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHH
T ss_pred HHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHH
Confidence 99999999 99999999998822 233457899999999999983 4788888776543
No 89
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.88 E-value=3.2e-22 Score=179.87 Aligned_cols=205 Identities=21% Similarity=0.202 Sum_probs=142.3
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCCC---CccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHcc
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGDD---VYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~~---~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~ 137 (285)
|++++||.++. .++.+|++.+++.++..... .....+...++++.+++++|.+.+++++||++|++.+++++.
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~ 114 (392)
T 3ruy_A 35 GNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTAR 114 (392)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHH
T ss_pred CCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHH
Confidence 56778887654 23468999999988765321 223456799999999999998889999999999999999876
Q ss_pred cc--------C-CCeEEecCCc-ceeeecccccccccccccccc---eeeeeeecCCCCCCCHHHHHHHhcccccccCCc
Q psy5413 138 DR--------R-DSEIIVGDCS-HIMLWEQGGASQTSVYSQIGR---VLMRGVTNQKDGTFDLDEMEAKFSTADNIHCAS 204 (285)
Q Consensus 138 ~~--------~-g~~vi~~~~~-h~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 204 (285)
.. + +++|++..+. |........+.....+...+. ..+..++. .|+++|++++++ +
T Consensus 115 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~-------~ 182 (392)
T 3ruy_A 115 RWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-----GDLEALKAAITP-------N 182 (392)
T ss_dssp HHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-----TCHHHHHHHCCT-------T
T ss_pred HhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-----ccHHHHHHHhcc-------C
Confidence 43 2 4578776554 444322111110011111111 11222222 289999999986 8
Q ss_pred eEEEEEecccCCCCeeeCC-HHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcc----cCCeEEEecccccCc--ce
Q psy5413 205 TSLVCVENTHNYCGGTVLP-MQWLRELKARCQEHNIPVHMDGARLPLAE-----VCA----SVDTVMFCLSKGLGA--PV 272 (285)
Q Consensus 205 ~~~v~i~~~~n~~gG~~~~-~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~----~~dv~~~s~sK~l~~--p~ 272 (285)
+++|++++++|++ |.++| .+++++|+++|++||+++|+||+|+++.. ... ..|+ .++||++++ .+
T Consensus 183 ~~~v~~~~~~npt-G~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~--~~~SK~l~gG~~~ 259 (392)
T 3ruy_A 183 TAAFILEPIQGEA-GINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDM--YILGKALGGGVFP 259 (392)
T ss_dssp EEEEEECSSBSTT-TSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE--EEECGGGGTTTSC
T ss_pred eEEEEEeCccCCC-CCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCE--EEEchhhhCChhh
Confidence 9999999999999 77775 55699999999999999999999973311 111 2344 467899987 66
Q ss_pred eEEeecCccccc
Q psy5413 273 GSILAGPEEFIQ 284 (285)
Q Consensus 273 gg~~~~~~~~i~ 284 (285)
+|+++.++++++
T Consensus 260 ~G~~~~~~~~~~ 271 (392)
T 3ruy_A 260 ISCAAANRDILG 271 (392)
T ss_dssp CEEEEECHHHHT
T ss_pred hEEEEECHHHHh
Confidence 788888877654
No 90
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.88 E-value=1.9e-22 Score=185.65 Aligned_cols=216 Identities=13% Similarity=0.060 Sum_probs=142.4
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccC----CC-CccCChhHHHHHHHHHhHc--CCCcEEEcCChHHHHHHHH
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVG----DD-VYLEDPTCKELQEKAAKLA--GKEAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~----~~-~y~~~~~~~~l~~~la~~~--g~~~~~~~~~Gs~a~~~al 133 (285)
|++++||.++ +.++++|++.+|+.+++.. .. ..+.++...+|++.+++++ +.+.++|++||++|++.++
T Consensus 50 G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al 129 (460)
T 3gju_A 50 GRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNI 129 (460)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHH
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHH
Confidence 5667777654 3355789999999877642 11 1234677889999999997 4456799999999999999
Q ss_pred HHcccc------C-CCeEEe-cCCcceeeeccccccccccccc-----ccceeeeeeecC---CCCCCC--------HHH
Q psy5413 134 MTHCDR------R-DSEIIV-GDCSHIMLWEQGGASQTSVYSQ-----IGRVLMRGVTNQ---KDGTFD--------LDE 189 (285)
Q Consensus 134 ~~~~~~------~-g~~vi~-~~~~h~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~---~~~~~d--------~~~ 189 (285)
++++.. + ++.|++ ...||+++.....+.....|.. ..+...+.+|.. ++...+ +++
T Consensus 130 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~ 209 (460)
T 3gju_A 130 KLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADK 209 (460)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHH
Confidence 998742 3 456665 5666776643222221111111 113333333321 111122 688
Q ss_pred HHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-----hhcccCCeE--EE
Q psy5413 190 MEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-----EVCASVDTV--MF 262 (285)
Q Consensus 190 l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-----~~~~~~dv~--~~ 262 (285)
|+++|++. +.+++++|++++++|++|..+.+.+++++|+++|++||++||+||+|+++. ...+..++. +.
T Consensus 210 le~~i~~~---~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~ 286 (460)
T 3gju_A 210 LEEMILAE---GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI 286 (460)
T ss_dssp HHHHHHHH---CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred HHHHHHhc---CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee
Confidence 99988641 123789999999999985568889999999999999999999999988442 112222222 56
Q ss_pred ecccccCc--ceeEEeecCcccc
Q psy5413 263 CLSKGLGA--PVGSILAGPEEFI 283 (285)
Q Consensus 263 s~sK~l~~--p~gg~~~~~~~~i 283 (285)
++||++++ ...|+++++++++
T Consensus 287 t~sK~l~gG~~~lg~v~~~~~i~ 309 (460)
T 3gju_A 287 TIAKGLTSAYAPLSGVIVADRVW 309 (460)
T ss_dssp EECGGGTTTSSCCEEEEEEHHHH
T ss_pred eeehhhcCCCCCeEEEEECHHHH
Confidence 78899987 3445666666654
No 91
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.88 E-value=4.3e-22 Score=181.24 Aligned_cols=207 Identities=14% Similarity=0.115 Sum_probs=150.5
Q ss_pred eeeeeccCCcCCCcHHHHHHHHhccc------------CCCCccCChhHHHHHHHHHhHcC----------CCcEEEcCC
Q psy5413 67 RTVDIRSDTISKPTMEMKNYMFNCEV------------GDDVYLEDPTCKELQEKAAKLAG----------KEAAIFVPS 124 (285)
Q Consensus 67 ~~~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~y~~~~~~~~l~~~la~~~g----------~~~~~~~~~ 124 (285)
.+++|.++....+++.+.+++.++.. ....|.......++++.++++++ .+.+++++|
T Consensus 37 ~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G 116 (428)
T 1iay_A 37 GVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGG 116 (428)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEH
T ss_pred ceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccC
Confidence 56888865545567788888875431 11345543347889999999875 345689999
Q ss_pred hHHHHHHHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccC
Q psy5413 125 GTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHC 202 (285)
Q Consensus 125 Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~ 202 (285)
|++++..++++++ ++|++|+++.++|...... +. ...|.+++.++.++ ++.+|++++++++++.. .++
T Consensus 117 ~~~ai~~~~~~~~-~~gd~Vl~~~p~y~~~~~~--~~------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~ 186 (428)
T 1iay_A 117 ATGANETIIFCLA-DPGDAFLVPSPYYPAFNRD--LR------WRTGVQLIPIHCESSNNFKITSKAVKEAYENAQ-KSN 186 (428)
T ss_dssp HHHHHHHHHHHHC-CTTCEEEEESSCCTTHHHH--TT------TTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHH-HTT
T ss_pred hHHHHHHHHHHhC-CCCCeEEEccCCCcchHHH--HH------HhcCCEEEEeecCCccCCcCCHHHHHHHHHHHH-hcC
Confidence 9999999999987 5899999988877544321 11 23478888888753 34689999999986421 112
Q ss_pred CceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----------hhhccc-------CC--eEEEe
Q psy5413 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----------AEVCAS-------VD--TVMFC 263 (285)
Q Consensus 203 ~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----------~~~~~~-------~d--v~~~s 263 (285)
.++++|++++|+||+ |.++|.+++++|+++|++||+++|+||+|..+ ..+... .| +++.|
T Consensus 187 ~~~~~v~l~~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s 265 (428)
T 1iay_A 187 IKVKGLILTNPSNPL-GTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYS 265 (428)
T ss_dssp CCEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEE
T ss_pred CceEEEEEcCCCCCC-CCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEec
Confidence 368999999999999 89999999999999999999999999998731 112222 57 66999
Q ss_pred cccccCc--ceeEEeec-Cccccc
Q psy5413 264 LSKGLGA--PVGSILAG-PEEFIQ 284 (285)
Q Consensus 264 ~sK~l~~--p~gg~~~~-~~~~i~ 284 (285)
+||++|. .+.|+++. ++++++
T Consensus 266 ~sK~~g~~Glr~G~~~~~~~~~~~ 289 (428)
T 1iay_A 266 LSKDMGLPGFRVGIIYSFNDDVVN 289 (428)
T ss_dssp STTTSSCGGGCEEEEEESCHHHHH
T ss_pred chhhcCCCCceEEEEEeCCHHHHH
Confidence 9999964 44455555 666543
No 92
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.88 E-value=1.5e-22 Score=178.75 Aligned_cols=188 Identities=14% Similarity=0.086 Sum_probs=142.7
Q ss_pred cCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC----cEEEcCChHHHHHHHHHHccccCCCeEEecCCcc
Q psy5413 76 ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE----AAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSH 151 (285)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~----~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h 151 (285)
+...++++++++.+....+..+...+...++++.+++++|.+ .+++++||++|+..+++++. + ++|+++++.|
T Consensus 8 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~-~--d~vl~~~~~~ 84 (353)
T 2yrr_A 8 PTPIPERVQKALLRPMRGHLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD-R--GPVLVLVNGA 84 (353)
T ss_dssp SCCCCHHHHGGGGSCCCCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS-C--CCEEEEECSH
T ss_pred CCCCCHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc-C--CcEEEEcCCC
Confidence 456788999999887654322222345889999999999874 35889999999999999876 3 7788877665
Q ss_pred eeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHH
Q psy5413 152 IMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELK 231 (285)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~ 231 (285)
... ...... ...|.+++.++.++++.+|+++++++++++ ++++|++++++||+ |.++| +++|.
T Consensus 85 ~~~-~~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~~v~~~~~~npt-G~~~~---~~~i~ 147 (353)
T 2yrr_A 85 FSQ-RVAEMA------ALHGLDPEVLDFPPGEPVDPEAVARALKRR------RYRMVALVHGETST-GVLNP---AEAIG 147 (353)
T ss_dssp HHH-HHHHHH------HHTTCCEEEEECCTTSCCCHHHHHHHHHHS------CCSEEEEESEETTT-TEECC---HHHHH
T ss_pred chH-HHHHHH------HHcCCceEEEeCCCCCCCCHHHHHHHHHhC------CCCEEEEEccCCCc-ceecC---HHHHH
Confidence 442 111122 245788888888777789999999999762 57899999999999 89999 89999
Q ss_pred HHHHHcCCeEEEeCccC-Chh--hh-cccCCeEEEecccccCcce-eEEeecCcccc
Q psy5413 232 ARCQEHNIPVHMDGARL-PLA--EV-CASVDTVMFCLSKGLGAPV-GSILAGPEEFI 283 (285)
Q Consensus 232 ~la~~~gi~li~Dea~~-~~~--~~-~~~~dv~~~s~sK~l~~p~-gg~~~~~~~~i 283 (285)
++|++||+++|+||+|. +.. .+ ..+.|+++.+++|+++++. .|+++.+++++
T Consensus 148 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~ 204 (353)
T 2yrr_A 148 ALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEAR 204 (353)
T ss_dssp HHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHH
T ss_pred HHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHH
Confidence 99999999999999987 111 11 1256899999999887743 37777777654
No 93
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.88 E-value=3.1e-22 Score=178.41 Aligned_cols=191 Identities=19% Similarity=0.224 Sum_probs=145.2
Q ss_pred eccCCcCCCcHHHHHHHHhcccCCC-----Ccc----CChhHHHHHHHHHhHcCCCc--EEEcCChHHHHHHHHHHccc-
Q psy5413 71 IRSDTISKPTMEMKNYMFNCEVGDD-----VYL----EDPTCKELQEKAAKLAGKEA--AIFVPSGTMGNLIAIMTHCD- 138 (285)
Q Consensus 71 ~~~~~~~~~~~~v~~a~~~~~~~~~-----~y~----~~~~~~~l~~~la~~~g~~~--~~~~~~Gs~a~~~al~~~~~- 138 (285)
|.......+++++.+++.+...... .|. ..+...++++.+++++|.+. +++++||++|+..+++++..
T Consensus 4 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~ 83 (382)
T 4hvk_A 4 FDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhh
Confidence 3344445678899999887664211 121 23456799999999999764 68999999999999998763
Q ss_pred --cCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCC
Q psy5413 139 --RRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNY 216 (285)
Q Consensus 139 --~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~ 216 (285)
++|++|+++...|.......... ...|.+++.++.++++.+|+++|++++++ ++++|++++++|+
T Consensus 84 ~~~~gd~vi~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~~~np 150 (382)
T 4hvk_A 84 NARKGKHILVSAVEHMSVINPAKFL------QKQGFEVEYIPVGKYGEVDVSFIDQKLRD-------DTILVSVQHANNE 150 (382)
T ss_dssp HGGGCCEEEEETTCCHHHHHHHHHH------HHTTCEEEEECBCTTSCBCHHHHHHHCCT-------TEEEEECCSBCTT
T ss_pred hcCCCCEEEECCCCcHHHHHHHHHH------HhcCCEEEEeccCCCCCcCHHHHHHHhcc-------CceEEEEECCCCC
Confidence 58999999888876554322221 23488889998877888999999999987 7899999999999
Q ss_pred CCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Ch---hhhcccCCeEEEecccccCcc-eeEEeecC
Q psy5413 217 CGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PL---AEVCASVDTVMFCLSKGLGAP-VGSILAGP 279 (285)
Q Consensus 217 ~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~---~~~~~~~dv~~~s~sK~l~~p-~gg~~~~~ 279 (285)
+ |.+.| +++|.++|++||+ +|+|++|+ +. .....+.|+++.|+||+++++ .|.+++.+
T Consensus 151 t-G~~~~---~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~ 213 (382)
T 4hvk_A 151 I-GTIQP---VEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRK 213 (382)
T ss_dssp T-CBBCC---HHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEET
T ss_pred c-eeeCC---HHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcC
Confidence 9 89999 9999999999999 99999987 21 111236899999999987653 44444433
No 94
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.88 E-value=1.2e-21 Score=176.61 Aligned_cols=185 Identities=15% Similarity=0.179 Sum_probs=141.6
Q ss_pred CCCcHHHHHHHHhcccCCCCcc--CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceee
Q psy5413 77 SKPTMEMKNYMFNCEVGDDVYL--EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIML 154 (285)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~y~--~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~ 154 (285)
..+.++...+..+.......|+ .++...++++.+++++|.+..++++||++|+..++++++ ++|++|+++.+.|..+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~~~~-~~gd~vl~~~~~y~~~ 111 (389)
T 3acz_A 33 CFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAFGSGMGAISSSTLAFL-QKGDHLIAGDTLYGCT 111 (389)
T ss_dssp CCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHTTTC-CTTCEEEEESSCCHHH
T ss_pred ecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCCchHH
Confidence 4455544444433222223343 478899999999999999888999999999999999876 5899999988777544
Q ss_pred eccc-ccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHH
Q psy5413 155 WEQG-GASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKAR 233 (285)
Q Consensus 155 ~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~l 233 (285)
.... ... ...|.+++.++. .|+++++++|++ ++++|++++|+||+ |.+.| +++|+++
T Consensus 112 ~~~~~~~~------~~~g~~~~~v~~-----~d~~~l~~~i~~-------~~~~v~~~~~~npt-G~~~~---l~~i~~~ 169 (389)
T 3acz_A 112 VSLFTHWL------PRFGIEVDLIDT-----SDVEKVKAAWKP-------NTKMVYLESPANPT-CKVSD---IKGIAVV 169 (389)
T ss_dssp HHHHHHHH------HHTTCEEEEECT-----TCHHHHHHTCCT-------TEEEEEEESSCTTT-CCCCC---HHHHHHH
T ss_pred HHHHHHHH------HHcCCEEEEECC-----CCHHHHHHhcCC-------CCeEEEEECCCCCC-CeecC---HHHHHHH
Confidence 3211 111 345788888775 389999999987 79999999999999 89999 9999999
Q ss_pred HHHcCCeEEEeCccCChh---hhcccCCeEEEecccccCcc---eeEEeecCc-cccc
Q psy5413 234 CQEHNIPVHMDGARLPLA---EVCASVDTVMFCLSKGLGAP---VGSILAGPE-EFIQ 284 (285)
Q Consensus 234 a~~~gi~li~Dea~~~~~---~~~~~~dv~~~s~sK~l~~p---~gg~~~~~~-~~i~ 284 (285)
|++||+++|+||+|.... .+..+.|+++.|++|+++++ ++|+++.++ ++++
T Consensus 170 ~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~ 227 (389)
T 3acz_A 170 CHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIA 227 (389)
T ss_dssp HHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH
T ss_pred HHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHH
Confidence 999999999999988322 23357899999999999884 357887777 6653
No 95
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.88 E-value=1.4e-22 Score=182.62 Aligned_cols=201 Identities=14% Similarity=0.088 Sum_probs=151.2
Q ss_pred CeeeeeccCCcCC---CcHHHHHHHHhcccC----CCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHc
Q psy5413 66 IRTVDIRSDTISK---PTMEMKNYMFNCEVG----DDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 66 ~~~~~~~~~~~~~---~~~~v~~a~~~~~~~----~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~ 136 (285)
+.++||.++.+.. +++++.+++.++... ...|...+...++++.+++++|.+ .+++++||++|+..+++++
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~ 111 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVF 111 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHH
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHh
Confidence 4578998765432 678999998876542 245665556889999999999853 5789999999999999998
Q ss_pred cccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEE-EEecccC
Q psy5413 137 CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLV-CVENTHN 215 (285)
Q Consensus 137 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v-~i~~~~n 215 (285)
+ ++|++|++..++|...... . ...|.+++.++.++++ +|+++|++++++. ++++| ++++++|
T Consensus 112 ~-~~gd~Vl~~~p~y~~~~~~---~------~~~g~~~~~~~~~~~~-~d~~~l~~~l~~~------~~~~v~~~~~~~n 174 (397)
T 2zyj_A 112 L-DEGSPVLLEAPSYMGAIQA---F------RLQGPRFLTVPAGEEG-PDLDALEEVLKRE------RPRFLYLIPSFQN 174 (397)
T ss_dssp C-CTTCEEEEEESCCHHHHHH---H------HTTCCEEEEEEEETTE-ECHHHHHHHHHHC------CCSCEEECCBSCT
T ss_pred C-CCCCEEEEeCCCcHHHHHH---H------HHcCCEEEecCcCCCC-CCHHHHHHHHhhc------CCeEEEECCCCcC
Confidence 6 5899999887766544321 1 2347788888775544 8999999999752 56787 4688999
Q ss_pred CCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----------hhhccc---CC-eEEEecccccCc-ceeEEeecCc
Q psy5413 216 YCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----------AEVCAS---VD-TVMFCLSKGLGA-PVGSILAGPE 280 (285)
Q Consensus 216 ~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----------~~~~~~---~d-v~~~s~sK~l~~-p~gg~~~~~~ 280 (285)
|+ |.++|.+++++|+++|++||+++|+||+|+.+ ..+... -+ +++.|+||+++. .+.|+++.++
T Consensus 175 pt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 253 (397)
T 2zyj_A 175 PT-GGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHP 253 (397)
T ss_dssp TT-CCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCH
T ss_pred CC-CCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCH
Confidence 99 89999999999999999999999999998732 111111 22 558999999984 4557887777
Q ss_pred cccc
Q psy5413 281 EFIQ 284 (285)
Q Consensus 281 ~~i~ 284 (285)
++++
T Consensus 254 ~~~~ 257 (397)
T 2zyj_A 254 EALQ 257 (397)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 96
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.88 E-value=3.5e-22 Score=181.83 Aligned_cols=207 Identities=17% Similarity=0.143 Sum_probs=152.2
Q ss_pred CeeeeeccCCcC---CCcHHHHHHHHhcccC----CCCccCChhHHHHHHHHHhHc----CC-----CcEEEcCChHHHH
Q psy5413 66 IRTVDIRSDTIS---KPTMEMKNYMFNCEVG----DDVYLEDPTCKELQEKAAKLA----GK-----EAAIFVPSGTMGN 129 (285)
Q Consensus 66 ~~~~~~~~~~~~---~~~~~v~~a~~~~~~~----~~~y~~~~~~~~l~~~la~~~----g~-----~~~~~~~~Gs~a~ 129 (285)
+.++||.++.+. .+++++.+++.+.... ...|.......++++.+++++ |. +.+++++||++|+
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al 122 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQAL 122 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHH
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHH
Confidence 467899876543 3678999998876642 145665556788999999988 73 3468999999999
Q ss_pred HHHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccc-cCCceEEE
Q psy5413 130 LIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNI-HCASTSLV 208 (285)
Q Consensus 130 ~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~-~~~~~~~v 208 (285)
..++++++ ++|++|++..++|....... ...|.+++.++.++++ +|+++|++++++.... ++.++++|
T Consensus 123 ~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~---------~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v 191 (425)
T 1vp4_A 123 DLIGKLFL-DDESYCVLDDPAYLGAINAF---------RQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFI 191 (425)
T ss_dssp HHHHHHHC-CTTCEEEEEESCCHHHHHHH---------HTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred HHHHHHhC-CCCCEEEEeCCCcHHHHHHH---------HHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEE
Confidence 99999986 58999999877765443311 2347788888875544 8999999998651000 01268888
Q ss_pred -EEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----------hhc-ccCCeEEEecccccCc-ceeEE
Q psy5413 209 -CVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----------EVC-ASVDTVMFCLSKGLGA-PVGSI 275 (285)
Q Consensus 209 -~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----------~~~-~~~dv~~~s~sK~l~~-p~gg~ 275 (285)
++++++||| |.++|.+++++|+++|++||+++|+||+|+.+. .+. ...++++.|+||+++. .+.|+
T Consensus 192 ~~~~~~~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~ 270 (425)
T 1vp4_A 192 YVVSNFHNPA-GVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGM 270 (425)
T ss_dssp EEECSSCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEE
T ss_pred EECCCCCCCC-CCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEE
Confidence 478899999 899999999999999999999999999987321 111 1234669999999984 45678
Q ss_pred eecCccccc
Q psy5413 276 LAGPEEFIQ 284 (285)
Q Consensus 276 ~~~~~~~i~ 284 (285)
++.++++++
T Consensus 271 ~~~~~~~~~ 279 (425)
T 1vp4_A 271 VAGSKEFIR 279 (425)
T ss_dssp EECCHHHHH
T ss_pred EeeCHHHHH
Confidence 888777654
No 97
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.88 E-value=2.2e-22 Score=185.86 Aligned_cols=231 Identities=15% Similarity=0.086 Sum_probs=150.8
Q ss_pred CCccccccccccccccCCCCCccceeeccCCccccccccCCeeeeeccC----CcCCCcHHHHHHHHhcccCC---C--C
Q psy5413 26 TPALVESTPLSRSWSDNGNLSIPAMYCWLLPVPLRLGKVNIRTVDIRSD----TISKPTMEMKNYMFNCEVGD---D--V 96 (285)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~---~--~ 96 (285)
.|..+.++.+.+.|+.. |++++||.++ +.++++|+|.+|+.+++... . .
T Consensus 37 ~p~~~~~~~G~~l~d~~----------------------G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~ 94 (472)
T 3hmu_A 37 GTRVITRARGVWLNDSE----------------------GEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFF 94 (472)
T ss_dssp CCEEEEEEEBTEEEETT----------------------CCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSS
T ss_pred CCeeEEEeecCEEEECC----------------------CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcccccccc
Confidence 35556666666666644 4566666543 33568999999998876531 1 1
Q ss_pred ccCChhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHHHHHcccc-------CCCeEEe-cCCcceeeeccccccccccc
Q psy5413 97 YLEDPTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIAIMTHCDR-------RDSEIIV-GDCSHIMLWEQGGASQTSVY 166 (285)
Q Consensus 97 y~~~~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~al~~~~~~-------~g~~vi~-~~~~h~~~~~~~~~~~~~~~ 166 (285)
...++...+|++.++++++ .+.++|++||++|++.++++++.. .++.||+ ...||+++.........+.|
T Consensus 95 ~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~ 174 (472)
T 3hmu_A 95 KTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGM 174 (472)
T ss_dssp SEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhh
Confidence 2346778999999999985 457899999999999999998742 2345555 56778766433222211111
Q ss_pred ccc----cceeeeeeecC---CCCCCC--------HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHH
Q psy5413 167 SQI----GRVLMRGVTNQ---KDGTFD--------LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELK 231 (285)
Q Consensus 167 ~~~----~g~~~~~~~~~---~~~~~d--------~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~ 231 (285)
... .+...+..|.. .++ .| +++|+++|++. +.+++++|++|++++++|..+.++++|++|+
T Consensus 175 ~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~---~~~~~aavi~epv~~~gG~~~~~~~~l~~l~ 250 (472)
T 3hmu_A 175 HAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILEL---GENRVAAFIAEPVQGAGGVIVAPDSYWPEIQ 250 (472)
T ss_dssp HHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---CGGGEEEEEECSSBSTTTCBCCCTTHHHHHH
T ss_pred ccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhc---CCCCEEEEEEcCccCCCCcccCCHHHHHHHH
Confidence 111 12333332220 011 23 78899888641 1137899999999999855666899999999
Q ss_pred HHHHHcCCeEEEeCccCChh-----hhcccCCeE--EEecccccCc---ceeEEeecCcccc
Q psy5413 232 ARCQEHNIPVHMDGARLPLA-----EVCASVDTV--MFCLSKGLGA---PVGSILAGPEEFI 283 (285)
Q Consensus 232 ~la~~~gi~li~Dea~~~~~-----~~~~~~dv~--~~s~sK~l~~---p~gg~~~~~~~~i 283 (285)
++|++||++||+||+|+++. ...+..++. +.+++|++++ |+| +++++++++
T Consensus 251 ~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~plG-~v~~~~~i~ 311 (472)
T 3hmu_A 251 RICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIG-GSIVCDEVA 311 (472)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCE-EEEEEHHHH
T ss_pred HHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCcceE-EEEECHHHH
Confidence 99999999999999988442 112222222 4577899876 445 555566654
No 98
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.88 E-value=7.2e-22 Score=176.90 Aligned_cols=187 Identities=18% Similarity=0.082 Sum_probs=145.6
Q ss_pred CCCcHHHHHHHHhcccCC-CC---c-cCChhHHHHHHHHHhHcCCCc--EEEcCChHHHHHHHHHHcccc----------
Q psy5413 77 SKPTMEMKNYMFNCEVGD-DV---Y-LEDPTCKELQEKAAKLAGKEA--AIFVPSGTMGNLIAIMTHCDR---------- 139 (285)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~-~~---y-~~~~~~~~l~~~la~~~g~~~--~~~~~~Gs~a~~~al~~~~~~---------- 139 (285)
..++|++.+++.+..... .. | +..+...++++.+++++|.+. +++++||++|+..+++++...
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~ 119 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLS 119 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhccc
Confidence 346789999998766532 11 1 123445678899999998764 499999999999999998743
Q ss_pred --CCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCC
Q psy5413 140 --RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYC 217 (285)
Q Consensus 140 --~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~ 217 (285)
+|++|+++.++|..+..... ..|.+++.++.++++.+|+++|++++++. ++++|++++|+|++
T Consensus 120 ~~~gd~vl~~~~~~~~~~~~~~---------~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~npt 184 (397)
T 3f9t_A 120 KNEHPKIIVPITAHFSFEKGRE---------MMDLEYIYAPIKEDYTIDEKFVKDAVEDY------DVDGIIGIAGTTEL 184 (397)
T ss_dssp CCSSCEEEEETTCCTHHHHHHH---------HHTCEEEEECBCTTSSBCHHHHHHHHHHS------CCCEEEEEBSCTTT
T ss_pred CCCCeEEEECCcchhHHHHHHH---------HcCceeEEEeeCCCCcCCHHHHHHHHhhc------CCeEEEEECCCCCC
Confidence 38999999998876544222 34889999998778889999999999762 57899999999999
Q ss_pred CeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh------------------hhcccCCeEEEecccccCc--ceeEEee
Q psy5413 218 GGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA------------------EVCASVDTVMFCLSKGLGA--PVGSILA 277 (285)
Q Consensus 218 gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------------------~~~~~~dv~~~s~sK~l~~--p~gg~~~ 277 (285)
|.+.| +++|+++|++||+++|+||+|+... ... ++|+++.+++|++++ +.|++++
T Consensus 185 -G~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~ 259 (397)
T 3f9t_A 185 -GTIDN---IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILF 259 (397)
T ss_dssp -CCBCC---HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEE
T ss_pred -CCCCC---HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEE
Confidence 88999 9999999999999999999987211 011 678899999999865 5666667
Q ss_pred cCcccc
Q psy5413 278 GPEEFI 283 (285)
Q Consensus 278 ~~~~~i 283 (285)
.++.++
T Consensus 260 ~~~~~~ 265 (397)
T 3f9t_A 260 KDIGYK 265 (397)
T ss_dssp SSGGGG
T ss_pred eCHHHH
Confidence 766554
No 99
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.88 E-value=2.8e-22 Score=179.12 Aligned_cols=183 Identities=14% Similarity=0.105 Sum_probs=141.6
Q ss_pred HHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcC---CCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecc
Q psy5413 81 MEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAG---KEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQ 157 (285)
Q Consensus 81 ~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g---~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~ 157 (285)
+++.+++.+. ...|+..+...++++.++++++ .+.+++++||++|+..++++++ ++||+|+++.++|......
T Consensus 46 ~~~~~~~~~~---~~~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~~~~~~~~ 121 (375)
T 3op7_A 46 EDFYKKLQGT---KLNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLI-EPGDHVISLYPTYQQLYDI 121 (375)
T ss_dssp HHHHHHHHTS---CCSSCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESSCTHHHHH
T ss_pred HHHHHHHhcC---CcCCCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhc-CCCCEEEEeCCCchhHHHH
Confidence 4555555433 3567766778899999999963 3568999999999999999987 6899999988877554332
Q ss_pred cccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHH
Q psy5413 158 GGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQ 235 (285)
Q Consensus 158 ~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~ 235 (285)
. ...|.+++.++.++ .+.+|+++|++++++ ++++|++++|+||+ |.++|.+++++|+++|+
T Consensus 122 ~---------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~~~npt-G~~~~~~~l~~i~~la~ 184 (375)
T 3op7_A 122 P---------KSLGAEVDLWQIEEENGWLPDLEKLRQLIRP-------TTKMICINNANNPT-GAVMDRTYLEELVEIAS 184 (375)
T ss_dssp H---------HHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-------TCCEEEEESSCTTT-CCCCCHHHHHHHHHHHH
T ss_pred H---------HHcCCEEEEEeccccCCCCCCHHHHHHhhcc-------CCeEEEEcCCCCCC-CCCCCHHHHHHHHHHHH
Confidence 1 23477887777642 445799999999987 78999999999999 89999999999999999
Q ss_pred HcCCeEEEeCccCChh-----hhc--ccCCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 236 EHNIPVHMDGARLPLA-----EVC--ASVDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 236 ~~gi~li~Dea~~~~~-----~~~--~~~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
+||+++|+||+|..+. ... ...++++.|+||+++. .++|+++.++++++
T Consensus 185 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~ 242 (375)
T 3op7_A 185 EVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTD 242 (375)
T ss_dssp TTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHH
T ss_pred HcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHH
Confidence 9999999999988321 111 2334669999999973 55678887877654
No 100
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.88 E-value=2.3e-21 Score=175.91 Aligned_cols=184 Identities=21% Similarity=0.198 Sum_probs=142.3
Q ss_pred cCCcCCCcHHHHHHHHhcccCCCCcc--CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCc
Q psy5413 73 SDTISKPTMEMKNYMFNCEVGDDVYL--EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCS 150 (285)
Q Consensus 73 ~~~~~~~~~~v~~a~~~~~~~~~~y~--~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~ 150 (285)
+..+..++++..++..+ ..+...|+ .++...++++.+++++|.+.+++++||++|+..++++++ ++|++|+++.+.
T Consensus 27 s~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~al~~l~-~~gd~vi~~~~~ 104 (412)
T 2cb1_A 27 VAAYGFKTLEEGQERFA-TGEGYVYARQKDPTAKALEERLKALEGALEAVVLASGQAATFAALLALL-RPGDEVVAAKGL 104 (412)
T ss_dssp CSBCCCSSHHHHHHHHH-HCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTC-CTTCEEEEETTC
T ss_pred cceeecCChHHHHHHhc-cccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 33445666655444433 22334555 447899999999999999989999999999999999886 589999998888
Q ss_pred ceeeeccc-ccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHH
Q psy5413 151 HIMLWEQG-GASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRE 229 (285)
Q Consensus 151 h~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~ 229 (285)
|..+.... ... ...|.+++.++. |+++|+++|++ ++++|++++++|++ |.++| +++
T Consensus 105 ~~~~~~~~~~~~------~~~g~~~~~~~~------~~~~l~~~i~~-------~~~~v~~~~~~n~~-G~~~~---l~~ 161 (412)
T 2cb1_A 105 FGQTIGLFGQVL------SLMGVTVRYVDP------EPEAVREALSA-------KTRAVFVETVANPA-LLVPD---LEA 161 (412)
T ss_dssp CHHHHHHHHHTT------TTTTCEEEEECS------SHHHHHHHCCT-------TEEEEEEESSCTTT-CCCCC---HHH
T ss_pred chhHHHHHHHHH------HHcCCEEEEECC------CHHHHHHHhcc-------CCeEEEEeCCCCCC-ccccc---HHH
Confidence 75443211 111 245778888775 48999999987 89999999999999 89999 999
Q ss_pred HHHHHHHcCCeEEEeCccCCh----hhhcccCCeEEEecccccCc---ceeEEeecCcc
Q psy5413 230 LKARCQEHNIPVHMDGARLPL----AEVCASVDTVMFCLSKGLGA---PVGSILAGPEE 281 (285)
Q Consensus 230 i~~la~~~gi~li~Dea~~~~----~~~~~~~dv~~~s~sK~l~~---p~gg~~~~~~~ 281 (285)
|+++|++||+++|+||+|+.. .....+.|+++.|+||++++ +.|++++.+++
T Consensus 162 i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~ 220 (412)
T 2cb1_A 162 LATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRET 220 (412)
T ss_dssp HHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCC
T ss_pred HHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccc
Confidence 999999999999999999843 22334789999999999987 46777777643
No 101
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.87 E-value=3.3e-22 Score=179.95 Aligned_cols=196 Identities=16% Similarity=0.175 Sum_probs=146.2
Q ss_pred eeeeeccCCcCCCcHHHHHHHHhcccC---C--CCcc----CChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHH
Q psy5413 67 RTVDIRSDTISKPTMEMKNYMFNCEVG---D--DVYL----EDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 67 ~~~~~~~~~~~~~~~~v~~a~~~~~~~---~--~~y~----~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~ 135 (285)
.++.|........++++.+++.+.... . ..|. ..+...++++.+++++|.+ .+++++||++|+..++++
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~ 99 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLG 99 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHT
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHH
Confidence 445555444456788999998876541 1 1121 2345789999999999976 579999999999999998
Q ss_pred cc---ccCCC-eEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEe
Q psy5413 136 HC---DRRDS-EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVE 211 (285)
Q Consensus 136 ~~---~~~g~-~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~ 211 (285)
++ .++|| +|+++...|.+........ ...|.+++.++.++++.+|+++|++++++ ++++|+++
T Consensus 100 l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~v~~~ 166 (400)
T 3vax_A 100 LAPYGERTGRRHIITSAIEHKAVLEPLEHL------AGRGFEVDFLTPGPSGRISVEGVMERLRP-------DTLLVSLM 166 (400)
T ss_dssp THHHHHHHTCCEEEEETTSCHHHHHHHHHH------HTTTCEEEEECCCTTCCCCHHHHHTTCCT-------TEEEEECC
T ss_pred HHHhhccCCCCEEEECccccHhHHHHHHHH------HhcCCeEEEEccCCCCCcCHHHHHHhcCC-------CceEEEEE
Confidence 75 14799 9999887776543322111 23588899998877888999999999987 79999999
Q ss_pred cccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chhhh--cccCCeEEEecccccCcc-eeEEe-ecC
Q psy5413 212 NTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLAEV--CASVDTVMFCLSKGLGAP-VGSIL-AGP 279 (285)
Q Consensus 212 ~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~~~--~~~~dv~~~s~sK~l~~p-~gg~~-~~~ 279 (285)
+++||+ |.++| +++|.++|++||+++|+||+|+ +.... ....|+++.|+||.++.+ .|+++ +.+
T Consensus 167 ~~~npt-G~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~ 235 (400)
T 3vax_A 167 HVNNET-GVIQP---VAELAQQLRATPTYLHVDAAQGYGKVPGDLTTPIDMISISGHKIGAPKGVGALVTRRR 235 (400)
T ss_dssp SBCTTT-CBBCC---HHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSCCSEEEEETGGGTSCSSCEEEEECBC
T ss_pred CCCCCc-eeeCc---HHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhcCcEEEEeHHHhCCCCceEEEEEecc
Confidence 999999 89999 8999999999999999999987 22111 111889999999966553 44444 444
No 102
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.87 E-value=5.3e-22 Score=181.07 Aligned_cols=206 Identities=12% Similarity=0.050 Sum_probs=151.8
Q ss_pred eeeeeccCCcCCCcHHHHHHHHhcccCC-------------CCccCChhHHHHHHHHHhHcC----------CCcEEEcC
Q psy5413 67 RTVDIRSDTISKPTMEMKNYMFNCEVGD-------------DVYLEDPTCKELQEKAAKLAG----------KEAAIFVP 123 (285)
Q Consensus 67 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~-------------~~y~~~~~~~~l~~~la~~~g----------~~~~~~~~ 123 (285)
.++.+....-..+++.+.+++.++.... ..|.......+|++.++++++ .+.+++++
T Consensus 39 ~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~ 118 (435)
T 3piu_A 39 GIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTA 118 (435)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEE
T ss_pred CeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcC
Confidence 3566665555557889999888764311 246655567899999999987 45679999
Q ss_pred ChHHHHHHHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhccccccc
Q psy5413 124 SGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIH 201 (285)
Q Consensus 124 ~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~ 201 (285)
||++|+..++++++ ++|+.|+++.++|........ ...|.+++.++.++ .+.+|+++|++++++.. .+
T Consensus 119 gg~~a~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~ 188 (435)
T 3piu_A 119 GATSANETFIFCLA-DPGEAVLIPTPYYPGFDRDLK--------WRTGVEIVPIHCTSSNGFQITETALEEAYQEAE-KR 188 (435)
T ss_dssp HHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHTT--------TTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHH-HT
T ss_pred ChHHHHHHHHHHhc-CCCCeEEECCCccccHHHHHH--------HhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHH-hc
Confidence 99999999999987 689999998888765433221 13488888888754 34589999999997521 12
Q ss_pred CCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----------hhhccc---------CC--eE
Q psy5413 202 CASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL----------AEVCAS---------VD--TV 260 (285)
Q Consensus 202 ~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~----------~~~~~~---------~d--v~ 260 (285)
+.++++|++++|+||+ |.+++.+++++|+++|++||+++|+||+|... ..+... .| ++
T Consensus 189 ~~~~~~v~i~~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~ 267 (435)
T 3piu_A 189 NLRVKGVLVTNPSNPL-GTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHV 267 (435)
T ss_dssp TCCEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEE
T ss_pred CCCeEEEEEcCCCCCC-CCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEE
Confidence 3378999999999999 89999999999999999999999999998721 111111 22 56
Q ss_pred EEecccccCc--ceeEEeec-Ccccc
Q psy5413 261 MFCLSKGLGA--PVGSILAG-PEEFI 283 (285)
Q Consensus 261 ~~s~sK~l~~--p~gg~~~~-~~~~i 283 (285)
+.|+||++|. .+.|++++ +++++
T Consensus 268 i~s~sK~~g~~G~r~G~~~~~~~~~~ 293 (435)
T 3piu_A 268 VYSLSKDLGLPGFRVGAIYSNDDMVV 293 (435)
T ss_dssp EEESSSSSCCGGGCEEEEEESCHHHH
T ss_pred EEeeecccCCCceeEEEEEeCCHHHH
Confidence 8999999973 44556655 45443
No 103
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.87 E-value=1.1e-21 Score=176.95 Aligned_cols=197 Identities=16% Similarity=0.112 Sum_probs=149.0
Q ss_pred CCeeeeeccCCc-CC-CcHHHHHHHHhcccC--C------CCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTI-SK-PTMEMKNYMFNCEVG--D------DVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~~-~~-~~~~v~~a~~~~~~~--~------~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~ 134 (285)
|+++++|.+++. +. .+|++.+++.++... . ..|+..+...++++.+++++|.+..+++++|++++..++.
T Consensus 45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~ 124 (401)
T 2bwn_A 45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLS 124 (401)
T ss_dssp EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHH
T ss_pred CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHH
Confidence 577888886554 32 578999998876542 1 1345557799999999999998877777899999988887
Q ss_pred Hccc-cCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 135 THCD-RRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 135 ~~~~-~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
++.. ++|+.|+++.++|....... ...|.+++.++.+ |+++++++++... .+++++|+++++
T Consensus 125 ~l~~~~~gd~Vl~~~~~~~~~~~~~---------~~~g~~~~~v~~~-----d~~~le~~l~~~~---~~~~~~v~~~~~ 187 (401)
T 2bwn_A 125 TLRVLFPGLIIYSDSLNHASMIEGI---------KRNAGPKRIFRHN-----DVAHLRELIAADD---PAAPKLIAFESV 187 (401)
T ss_dssp HHHHHSTTCEEEEETTCCHHHHHHH---------HHSCCCEEEECTT-----CHHHHHHHHHHSC---TTSCEEEEEESB
T ss_pred HHhcCCCCCEEEECchhhHHHHHHH---------HHcCCeEEEEcCC-----CHHHHHHHHHhhc---cCCceEEEEecC
Confidence 7532 47899999988886654322 2347788888763 7899999887411 027899999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh------hh-----cccCCeEEEecccccCcceeEEeecCcc
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLA------EV-----CASVDTVMFCLSKGLGAPVGSILAGPEE 281 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~------~~-----~~~~dv~~~s~sK~l~~p~gg~~~~~~~ 281 (285)
+|++ |.++| +++|+++|++||+++|+||+|+ +.. .+ ....|+++.|+||+++++ ||+++++++
T Consensus 188 ~npt-G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~-GG~~~~~~~ 262 (401)
T 2bwn_A 188 YSMD-GDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVF-GGYIAASAR 262 (401)
T ss_dssp CTTT-CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSC-CEEEEECHH
T ss_pred cCCC-CCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCC-CCEEecCHH
Confidence 9999 89999 9999999999999999999988 211 11 123577899999999974 578877766
Q ss_pred cc
Q psy5413 282 FI 283 (285)
Q Consensus 282 ~i 283 (285)
++
T Consensus 263 ~~ 264 (401)
T 2bwn_A 263 MV 264 (401)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 104
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.87 E-value=6.3e-22 Score=178.28 Aligned_cols=199 Identities=13% Similarity=0.024 Sum_probs=147.4
Q ss_pred eeeeeccCCcCC-CcHHHHHHHHhccc-CCCCccCChhHHHHHHHHHhHc----C----CCcEEEcCChHHHHHHHHHHc
Q psy5413 67 RTVDIRSDTISK-PTMEMKNYMFNCEV-GDDVYLEDPTCKELQEKAAKLA----G----KEAAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 67 ~~~~~~~~~~~~-~~~~v~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~----g----~~~~~~~~~Gs~a~~~al~~~ 136 (285)
.+++|..+.+.. +++++.+++.++.. ....|... ..++++.+++++ | .+.+++++||++|+..+++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l 109 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREF 109 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh
Confidence 467787666543 67899999887764 23455532 778888888874 5 345799999999999999998
Q ss_pred cccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC-CC--CCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 137 CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ-KD--GTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 137 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
+ ++|++|++..++|....... ...|.+++.++.. ++ +.+|+++|++++++. ++++|++++|
T Consensus 110 ~-~~gd~vl~~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~------~~~~v~~~~~ 173 (399)
T 1c7n_A 110 T-KPGDGVIIITPVYYPFFMAI---------KNQERKIIECELLEKDGYYTIDFQKLEKLSKDK------NNKALLFCSP 173 (399)
T ss_dssp C-CTTCEEEECSSCCTHHHHHH---------HTTTCEEEECCCEEETTEEECCHHHHHHHHTCT------TEEEEEEESS
T ss_pred c-CCCCEEEEcCCCcHhHHHHH---------HHcCCEEEecccccCCCCEEEcHHHHHHHhccC------CCcEEEEcCC
Confidence 7 58999999887765443321 2347788877763 22 248999999999731 7899999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc------ccCCeEEEecccccCc--ceeEEeec
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC------ASVDTVMFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~------~~~dv~~~s~sK~l~~--p~gg~~~~ 278 (285)
+||+ |.++|.+++++|+++|++||+++|+||+|+.+. .+. ...++++.|+||+++. .+.|+++.
T Consensus 174 ~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 252 (399)
T 1c7n_A 174 HNPV-GRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIII 252 (399)
T ss_dssp BTTT-TBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred CCCC-CcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEE
Confidence 9999 899999999999999999999999999987321 111 1223568999999874 44566766
Q ss_pred C-ccccc
Q psy5413 279 P-EEFIQ 284 (285)
Q Consensus 279 ~-~~~i~ 284 (285)
+ +++++
T Consensus 253 ~~~~~~~ 259 (399)
T 1c7n_A 253 KNPDIRE 259 (399)
T ss_dssp CCHHHHH
T ss_pred CCHHHHH
Confidence 4 55543
No 105
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.87 E-value=7.6e-22 Score=181.50 Aligned_cols=216 Identities=11% Similarity=0.030 Sum_probs=142.6
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccCC---C--CccCChhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHHH
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVGD---D--VYLEDPTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~---~--~y~~~~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~al 133 (285)
|++++||.++ +.++++|++.+|+.+++... . ....++...++++.++++++ .+.++|++||++|++.++
T Consensus 49 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al 128 (459)
T 4a6r_A 49 GNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMI 128 (459)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHH
T ss_pred CCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHH
Confidence 5667777654 33557899999998876521 1 12356778999999999984 567899999999999999
Q ss_pred HHcccc-------CCCeEEe-cCCcceeeeccccccccccccc-----ccceeeeeeecC---CCCCCC--------HHH
Q psy5413 134 MTHCDR-------RDSEIIV-GDCSHIMLWEQGGASQTSVYSQ-----IGRVLMRGVTNQ---KDGTFD--------LDE 189 (285)
Q Consensus 134 ~~~~~~-------~g~~vi~-~~~~h~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~---~~~~~d--------~~~ 189 (285)
++++.. .++.|++ ...||+++...........|.. ..+...+.+|.. .+. .| +++
T Consensus 129 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~ 207 (459)
T 4a6r_A 129 RMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARW 207 (459)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHH
Confidence 998742 3566665 5666766533222211111111 113333333320 111 34 788
Q ss_pred HHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-----hhcccCCeE--EE
Q psy5413 190 MEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-----EVCASVDTV--MF 262 (285)
Q Consensus 190 l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-----~~~~~~dv~--~~ 262 (285)
|+++|++. +.+++++|+++++++++|..+.+.+++++|+++|++||++||+||+|+++. ...+..++. +.
T Consensus 208 le~~i~~~---~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~ 284 (459)
T 4a6r_A 208 LEEKILEI---GADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLF 284 (459)
T ss_dssp HHHHHHHH---CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE
T ss_pred HHHHHHHc---CCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee
Confidence 99988641 112789999999998886667799999999999999999999999988432 112222222 55
Q ss_pred ecccccCc--ceeEEeecCccccc
Q psy5413 263 CLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 263 s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
++||++++ ...|++++++++++
T Consensus 285 t~sK~l~gg~~~lg~v~~~~~i~~ 308 (459)
T 4a6r_A 285 TAAKGLSSGYLPIGAVFVGKRVAE 308 (459)
T ss_dssp EECGGGGTTSSCCEEEEECHHHHH
T ss_pred ehhhhhcCCCCCccceeeCHHHHH
Confidence 78899876 34455666776543
No 106
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.87 E-value=1.3e-21 Score=172.06 Aligned_cols=192 Identities=13% Similarity=0.052 Sum_probs=150.4
Q ss_pred CeeeeeccC-CcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccccCCC
Q psy5413 66 IRTVDIRSD-TISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCDRRDS 142 (285)
Q Consensus 66 ~~~~~~~~~-~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~~~g~ 142 (285)
+++++|.++ ++..++|.+.+++.+...+...|. ++...++++.++++++.+ .+++++|+++++..++.++ +|+
T Consensus 16 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y~-~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~---~gd 91 (337)
T 3p1t_A 16 AQAVCLAFNENPEAVEPRVQAAIAAAAARINRYP-FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSM 91 (337)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSCC-TTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS---TTS
T ss_pred CCceEeeCCCCCCCCCHHHHHHHHHhhhhhccCC-CCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc---CCC
Confidence 467888866 666789999999998776656674 678999999999999875 4688888899999999886 789
Q ss_pred eEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeC
Q psy5413 143 EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVL 222 (285)
Q Consensus 143 ~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~ 222 (285)
+|+++.++|....... ...|.+++.++.++++.+|+++++++ . ++++|++++|+||+ |.++
T Consensus 92 ~vl~~~p~~~~~~~~~---------~~~g~~~~~v~~~~~~~~d~~~l~~~--~-------~~~~v~i~~p~npt-G~~~ 152 (337)
T 3p1t_A 92 RFVTAWPGFDGYRARI---------AVSGLRHFEIGLTDDLLLDPNDLAQV--S-------RDDCVVLANPSNPT-GQAL 152 (337)
T ss_dssp EEEEESSSCSHHHHHH---------TTSCCEEEEECBCTTSSBCHHHHTTC--C-------TTEEEEEESSCTTT-CCCC
T ss_pred eEEEeCCCcHHHHHHH---------HHcCCEEEEecCCCCCCCCHHHHHhh--c-------CCCEEEEeCCCCCC-CCCC
Confidence 9999888876544322 24488999998877778999998876 2 56899999999999 9999
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccCChhh-----h-cccCCeEEEecccccC--cceeEEeecCccccc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARLPLAE-----V-CASVDTVMFCLSKGLG--APVGSILAGPEEFIQ 284 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~-~~~~dv~~~s~sK~l~--~p~gg~~~~~~~~i~ 284 (285)
| ++++.++|+++++ +|+||+|..+.. . ....++++.|+||+++ |.+.|+++.++++++
T Consensus 153 ~---~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~ 218 (337)
T 3p1t_A 153 S---AGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIA 218 (337)
T ss_dssp C---HHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHH
T ss_pred C---HHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHH
Confidence 9 7777888888997 666999873221 1 1234567999999997 366788888877654
No 107
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.87 E-value=7.1e-22 Score=179.00 Aligned_cols=197 Identities=17% Similarity=0.144 Sum_probs=149.4
Q ss_pred CeeeeeccCCc-----CCCcHHHHHHHHhcccC--CCCccCChhHHHHHHHHHhHcC--------------CCcEEEcCC
Q psy5413 66 IRTVDIRSDTI-----SKPTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKAAKLAG--------------KEAAIFVPS 124 (285)
Q Consensus 66 ~~~~~~~~~~~-----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g--------------~~~~~~~~~ 124 (285)
+.+++|..+.+ ..+++.+.+++.+.... ...|+......++++.++++++ .+.+++++|
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g 112 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSG 112 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESH
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCC
Confidence 35788888765 34788999999877653 2456655567899999999987 345799999
Q ss_pred hHHHHHHHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccC
Q psy5413 125 GTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHC 202 (285)
Q Consensus 125 Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~ 202 (285)
|++|+..++++++ ++|++|++..++|...... . ...|.+++.++.++ .+.+|+++|++++++
T Consensus 113 ~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~---~------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------ 176 (416)
T 1bw0_A 113 GSHGILMAITAIC-DAGDYALVPQPGFPHYETV---C------KAYGIGMHFYNCRPENDWEADLDEIRRLKDD------ 176 (416)
T ss_dssp HHHHHHHHHHHHC-CTTCEEEEEESCCTHHHHH---H------HHTTCEEEEEEEEGGGTTEECHHHHHHHCCT------
T ss_pred hHHHHHHHHHHhC-CCCCEEEEcCCCcHhHHHH---H------HHcCcEEEEeecCcccCCCCCHHHHHHHhcc------
Confidence 9999999999986 5899999987776544331 1 23477888777643 355899999999976
Q ss_pred CceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-----------hhc---ccCC-eEEEecccc
Q psy5413 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-----------EVC---ASVD-TVMFCLSKG 267 (285)
Q Consensus 203 ~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-----------~~~---~~~d-v~~~s~sK~ 267 (285)
++++|++++|+||+ |.++|.+++++|+++|++||+++|+||+|..+. .+. ...+ +++.|+||+
T Consensus 177 -~~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (416)
T 1bw0_A 177 -KTKLLIVTNPSNPC-GSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKN 254 (416)
T ss_dssp -TEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTT
T ss_pred -CCeEEEEeCCCCCC-CcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhh
Confidence 78999999999999 899999999999999999999999999988321 111 1112 448999999
Q ss_pred cCc--ceeEEeecCc
Q psy5413 268 LGA--PVGSILAGPE 280 (285)
Q Consensus 268 l~~--p~gg~~~~~~ 280 (285)
+++ .+.|+++.++
T Consensus 255 ~~~~Glr~G~~~~~~ 269 (416)
T 1bw0_A 255 LVVPGWRLGWLLYVD 269 (416)
T ss_dssp TSCGGGCCEEEEEEC
T ss_pred CCCCCceEEEEEeeC
Confidence 765 4456666544
No 108
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.87 E-value=7.9e-22 Score=176.15 Aligned_cols=189 Identities=20% Similarity=0.221 Sum_probs=143.5
Q ss_pred CcCCCcHHHHHHHHhcccC---CC--Ccc----CChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHcc---ccC
Q psy5413 75 TISKPTMEMKNYMFNCEVG---DD--VYL----EDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHC---DRR 140 (285)
Q Consensus 75 ~~~~~~~~v~~a~~~~~~~---~~--~y~----~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~---~~~ 140 (285)
..+.+++++++++.+.... .. .|. ..+...++++.+++++|.+ .+++++||++|+..+++++. .++
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~ 87 (382)
T 4eb5_A 8 SAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARK 87 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGG
T ss_pred CCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCC
Confidence 3356789999999876652 11 132 1346889999999999976 56899999999999999876 258
Q ss_pred CCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCee
Q psy5413 141 DSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGT 220 (285)
Q Consensus 141 g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~ 220 (285)
|++|+++++.|.......... ...|.+++.++.++++.+|+++|++++++ ++++|++++++||+ |.
T Consensus 88 gd~Vl~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~~~npt-G~ 153 (382)
T 4eb5_A 88 GKHILVSAVEHMSVINPAKFL------QKQGFEVEYIPVGKYGEVDVSFIDQKLRD-------DTILVSVQHANNEI-GT 153 (382)
T ss_dssp CCEEEEETTCCHHHHHHHHHH------TTTTCEEEEECBCTTSCBCHHHHHHHCCT-------TEEEEECCSBCTTT-CB
T ss_pred CCEEEECCCcchHHHHHHHHH------HhCCcEEEEeccCCCCccCHHHHHHHhcC-------CCeEEEEeccCCCc-cc
Confidence 999999888876543322211 23488888888877778999999999987 78999999999999 89
Q ss_pred eCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh--hh-cccCCeEEEecccccCcceeEEeecCcc
Q psy5413 221 VLPMQWLRELKARCQEHNIPVHMDGARL-PLA--EV-CASVDTVMFCLSKGLGAPVGSILAGPEE 281 (285)
Q Consensus 221 ~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~--~~-~~~~dv~~~s~sK~l~~p~gg~~~~~~~ 281 (285)
++| +++|.++|++||++ |+||+|+ +.. .+ ..+.|+++.|+||+++.+..|+++.+++
T Consensus 154 ~~~---l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~ 214 (382)
T 4eb5_A 154 IQP---VEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKE 214 (382)
T ss_dssp BCC---HHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETT
T ss_pred cCC---HHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEccc
Confidence 999 89999999999999 9999987 111 11 1267899999999866432345544443
No 109
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.87 E-value=5e-22 Score=179.53 Aligned_cols=190 Identities=11% Similarity=0.052 Sum_probs=145.4
Q ss_pred cCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCc--E-EEcCChHHHHHHHHHHccccCCCeEEecCCcce
Q psy5413 76 ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEA--A-IFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHI 152 (285)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~--~-~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~ 152 (285)
+...++++.+++.+...++..+...+...++++.+++++|.+. . ++++||++|+..++++++ ++||+|+++++.|.
T Consensus 19 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~-~~gd~Vl~~~~~~~ 97 (416)
T 3isl_A 19 PVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVI-EPEDDVLIPIYGRF 97 (416)
T ss_dssp SCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHC-CTTCEEEEEESSHH
T ss_pred CcCcCHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhc-CCCCEEEEecCCcc
Confidence 3456788888887754333222234568899999999999764 3 478899999999999986 68999999877765
Q ss_pred eeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHH
Q psy5413 153 MLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKA 232 (285)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~ 232 (285)
... ..... ...|.+++.++.++++.+|+++|++++++. ++++|++++++|++ |.+.| +++|++
T Consensus 98 ~~~-~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~npt-G~~~~---l~~i~~ 160 (416)
T 3isl_A 98 GYL-LTEIA------ERYGANVHMLECEWGTVFDPEDIIREIKKV------KPKIVAMVHGETST-GRIHP---LKAIGE 160 (416)
T ss_dssp HHH-HHHHH------HHTTCEEEEEECCTTCCCCHHHHHHHHHHH------CCSEEEEESEETTT-TEECC---CHHHHH
T ss_pred cHH-HHHHH------HhcCCeeEEEecCCCCCCCHHHHHHHHhhC------CCcEEEEEccCCCC-ceecC---HHHHHH
Confidence 411 11122 345888999998778889999999999842 78999999999999 89999 999999
Q ss_pred HHHHcCCeEEEeCccC-Chh---hhcccCCeEEEecccccCcc-eeEEeecCcccc
Q psy5413 233 RCQEHNIPVHMDGARL-PLA---EVCASVDTVMFCLSKGLGAP-VGSILAGPEEFI 283 (285)
Q Consensus 233 la~~~gi~li~Dea~~-~~~---~~~~~~dv~~~s~sK~l~~p-~gg~~~~~~~~i 283 (285)
+|++||+++|+|++|+ +.. ....+.|+++.++||+++++ ..|+++.+++++
T Consensus 161 l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~ 216 (416)
T 3isl_A 161 ACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVA 216 (416)
T ss_dssp HHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHH
T ss_pred HHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCCeEEEEECHHHH
Confidence 9999999999999987 211 11236799999999997764 346777776654
No 110
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.87 E-value=3.5e-21 Score=177.91 Aligned_cols=211 Identities=15% Similarity=0.150 Sum_probs=153.0
Q ss_pred CccceeeccCCccccccccCCeeeeeccCCcCCCcHHHHHHHHhcccC--CCCccCChhHHHHHHHH----HhHcCCC--
Q psy5413 46 SIPAMYCWLLPVPLRLGKVNIRTVDIRSDTISKPTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKA----AKLAGKE-- 117 (285)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~l----a~~~g~~-- 117 (285)
..++...|.+|.+..+... ....+.+...+.....+ ...|...|...++|+.+ ++++|.+
T Consensus 64 ~~~~~~~~~~p~~~~~~~~------------~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~ 131 (475)
T 3k40_A 64 IMPGVTHWHSPKFHAYFPT------------ANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAE 131 (475)
T ss_dssp TGGGCCCTTCTTBCCSSCC------------CCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred HhccCCCCCCcCceeeCCC------------CCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCch
Confidence 4566777888865544433 22344454444333332 34577788888888876 5556765
Q ss_pred ---------cEEEcCChHHHHHHHHHHcccc------------------CCCeEEecCCcceeeeccccccccccccccc
Q psy5413 118 ---------AAIFVPSGTMGNLIAIMTHCDR------------------RDSEIIVGDCSHIMLWEQGGASQTSVYSQIG 170 (285)
Q Consensus 118 ---------~~~~~~~Gs~a~~~al~~~~~~------------------~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~ 170 (285)
.++|++|||+|+..++.+++.+ +++.|+++...|.+..+...+.
T Consensus 132 ~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~--------- 202 (475)
T 3k40_A 132 FLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLG--------- 202 (475)
T ss_dssp GCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHH---------
T ss_pred hccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHc---------
Confidence 3699999999999999987532 1246888999998877654444
Q ss_pred ceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh
Q psy5413 171 RVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL 250 (285)
Q Consensus 171 g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~ 250 (285)
|.+++.+|.++++ +|+++|+++|+++.+ .+..+.+|+++.+++.+ |.+.| +++|+++|++||+|+|+|++|+..
T Consensus 203 g~~~~~v~~d~~~-~d~~~L~~~i~~~~~-~~~~~~~v~~~~~~t~~-G~~~~---l~~I~~la~~~~~~lhvD~A~~~~ 276 (475)
T 3k40_A 203 GVKLRSVQSENHR-MRGAALEKAIEQDVA-EGLIPFYAVVTLGTTNS-CAFDY---LDECGPVGNKHNLWIHVDAAYAGS 276 (475)
T ss_dssp TCEEEEECCBTTB-CCHHHHHHHHHHHHH-TTCEEEEEEEEBSCTTT-CCBCC---HHHHHHHHHHTTCEEEEECTTGGG
T ss_pred CCceEEEECCCCC-cCHHHHHHHHHHHHH-CCCccEEEEEEecCCCC-cCcCC---HHHHHHHHHHhCCeEEEeHHhHHH
Confidence 8899999987788 999999999987322 12237788888888888 89999 999999999999999999998832
Q ss_pred h-------hh---cccCCeEEEecccccCcc--eeEEeecCcccc
Q psy5413 251 A-------EV---CASVDTVMFCLSKGLGAP--VGSILAGPEEFI 283 (285)
Q Consensus 251 ~-------~~---~~~~dv~~~s~sK~l~~p--~gg~~~~~~~~i 283 (285)
. .. .+.+|++++++|||+++| .|++++.+++++
T Consensus 277 ~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l 321 (475)
T 3k40_A 277 AFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWV 321 (475)
T ss_dssp GGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC
T ss_pred HHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHH
Confidence 1 11 135699999999999985 445666666554
No 111
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.87 E-value=2.5e-21 Score=174.39 Aligned_cols=202 Identities=16% Similarity=0.126 Sum_probs=138.9
Q ss_pred CCeeeeeccC---C-cCCCcHHHHHHHHhcccCC----CCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc
Q psy5413 65 NIRTVDIRSD---T-ISKPTMEMKNYMFNCEVGD----DVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 65 ~~~~~~~~~~---~-~~~~~~~v~~a~~~~~~~~----~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~ 136 (285)
|+.++||.++ + .++++|++.+++.++.... ..| ..+...++++.+++++|.+.+++++||++|++.+++++
T Consensus 39 g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~ 117 (397)
T 2ord_A 39 GNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLF-WNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIA 117 (397)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTS-EEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHH
T ss_pred CCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCcccc-CCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHH
Confidence 4567888754 3 3446899999998766421 123 35678999999999999888999999999999999987
Q ss_pred ccc-----CC-CeEEec-CCcceeeecccccccccccccccc---eeeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 137 CDR-----RD-SEIIVG-DCSHIMLWEQGGASQTSVYSQIGR---VLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 137 ~~~-----~g-~~vi~~-~~~h~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
... +| ++|++. ..+|..............+...+. ..++.++. .|+++|++++++ +++
T Consensus 118 ~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~l~~-------~~~ 185 (397)
T 2ord_A 118 RKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-----NNVEDLRRKMSE-------DVC 185 (397)
T ss_dssp HHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-----TCHHHHHHHCCT-------TEE
T ss_pred HHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-----CCHHHHHHHhhc-------CeE
Confidence 531 43 566665 455665442211110000000000 01344443 289999999976 899
Q ss_pred EEEEecccCCCCee-eCCHHHHHHHHHHHHHcCCeEEEeCccCChhh---------hcccCCeEEEecccccCc-ceeEE
Q psy5413 207 LVCVENTHNYCGGT-VLPMQWLRELKARCQEHNIPVHMDGARLPLAE---------VCASVDTVMFCLSKGLGA-PVGSI 275 (285)
Q Consensus 207 ~v~i~~~~n~~gG~-~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~---------~~~~~dv~~~s~sK~l~~-p~gg~ 275 (285)
+|++++++||+ |. +++.+++++|+++|++||+++|+||+|+++.. +....|++ ++||++++ .+.|+
T Consensus 186 ~v~~~~~~npt-G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~r~G~ 262 (397)
T 2ord_A 186 AVFLEPIQGES-GIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLGGGVPIGA 262 (397)
T ss_dssp EEEECSEECTT-TCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEE
T ss_pred EEEEecccCCC-CcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccCCCcCeEE
Confidence 99999999999 66 99999999999999999999999999984321 11125654 77899986 33445
Q ss_pred eecCccc
Q psy5413 276 LAGPEEF 282 (285)
Q Consensus 276 ~~~~~~~ 282 (285)
++.++++
T Consensus 263 ~~~~~~~ 269 (397)
T 2ord_A 263 VIVNERA 269 (397)
T ss_dssp EEECSTT
T ss_pred EEEchHh
Confidence 5555554
No 112
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.87 E-value=1.7e-21 Score=174.71 Aligned_cols=199 Identities=14% Similarity=0.093 Sum_probs=147.1
Q ss_pred CeeeeeccCCcCC-CcHHHHHHHHhcccC-CCCcc--CChhHHHHHHHHHhHcC----CCcEEEcCChHHHHHHHHHHcc
Q psy5413 66 IRTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYL--EDPTCKELQEKAAKLAG----KEAAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 66 ~~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~--~~~~~~~l~~~la~~~g----~~~~~~~~~Gs~a~~~al~~~~ 137 (285)
..+++|..+.+.. ++|++.+++.++... ...|. ..+...++++.+++++| .+.+++++||++|+..++++++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~ 111 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELT 111 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhC
Confidence 4668888766654 678999999887653 23343 33456667777777766 3457999999999999999987
Q ss_pred ccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC--C--CCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 138 DRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ--K--DGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 138 ~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
++|++|+++.++|....... ...|.+++.++.+ . ++.+|++++++++++ +++|++++|
T Consensus 112 -~~gd~vl~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~v~i~~p 173 (391)
T 4dq6_A 112 -KANDKIMIQEPVYSPFNSVV---------KNNNRELIISPLQKLENGNYIMDYEDIENKIKD--------VKLFILCNP 173 (391)
T ss_dssp -CTTCEEEECSSCCTHHHHHH---------HHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--------EEEEEEESS
T ss_pred -CCCCEEEEcCCCCHHHHHHH---------HHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--------CCEEEEECC
Confidence 68999999888876543322 2347888888765 2 234899999999853 789999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhcc------cCCeEEEecccccCc--ceeEEeec
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVCA------SVDTVMFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~~------~~dv~~~s~sK~l~~--p~gg~~~~ 278 (285)
+||+ |.+++.+++++|+++|++||+++|+||+|+.+. .+.. ...+++.|+||+++. .+.|+++.
T Consensus 174 ~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 252 (391)
T 4dq6_A 174 HNPV-GRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVL 252 (391)
T ss_dssp BTTT-TBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred CCCC-CcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEe
Confidence 9999 899999999999999999999999999988321 1111 122558999999863 45566665
Q ss_pred Cc-ccc
Q psy5413 279 PE-EFI 283 (285)
Q Consensus 279 ~~-~~i 283 (285)
++ +++
T Consensus 253 ~~~~~~ 258 (391)
T 4dq6_A 253 PDEKDY 258 (391)
T ss_dssp CSHHHH
T ss_pred CCHHHH
Confidence 44 554
No 113
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.87 E-value=4.4e-21 Score=177.54 Aligned_cols=211 Identities=15% Similarity=0.141 Sum_probs=153.2
Q ss_pred CccceeeccCCccccccccCCeeeeeccCCcCCCcHHHHHHHH-hccc-CCCCccCChhHHHHHHHHHhH----cCCC--
Q psy5413 46 SIPAMYCWLLPVPLRLGKVNIRTVDIRSDTISKPTMEMKNYMF-NCEV-GDDVYLEDPTCKELQEKAAKL----AGKE-- 117 (285)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~-~~~~-~~~~y~~~~~~~~l~~~la~~----~g~~-- 117 (285)
..++...|.+|.+..+... ....|.+...+. .... +...|...|...++|+.++++ +|.+
T Consensus 69 ~~~~~~~~~~p~~~~~~~~------------~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~ 136 (481)
T 4e1o_A 69 IMPGVVHWQSPHMHAYYPA------------LTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEH 136 (481)
T ss_dssp TGGGCCCTTSTTBCSSSCC------------CCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred HhcCCCCCCCCCeeEeCCC------------CCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChh
Confidence 3466778888864444332 223444444443 3332 245677788888898877554 5654
Q ss_pred ----------cEEEcCChHHHHHHHHHHcccc------------------CCCeEEecCCcceeeecccccccccccccc
Q psy5413 118 ----------AAIFVPSGTMGNLIAIMTHCDR------------------RDSEIIVGDCSHIMLWEQGGASQTSVYSQI 169 (285)
Q Consensus 118 ----------~~~~~~~Gs~a~~~al~~~~~~------------------~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~ 169 (285)
.+++++|||+|+..++.+++.+ ++..|+++...|.++.+...+.
T Consensus 137 ~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~-------- 208 (481)
T 4e1o_A 137 FLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLIS-------- 208 (481)
T ss_dssp GCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHH--------
T ss_pred hhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhC--------
Confidence 3589999999999999987642 3457888999998877654444
Q ss_pred cceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC
Q psy5413 170 GRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP 249 (285)
Q Consensus 170 ~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~ 249 (285)
|.+++.++.++++.+|+++|+++|+++.. .+..+.+|+++.+++++ |.+.| |++|+++|++||+|+|+|++|+.
T Consensus 209 -g~~~~~v~~~~~~~~d~~~Le~~i~~~~~-~g~~~~~vv~~~~~t~~-G~id~---l~~I~~la~~~~~~lhvDaA~g~ 282 (481)
T 4e1o_A 209 -LVKMKFLPVDDNFSLRGEALQKAIEEDKQ-RGLVPVFVCATLGTTGV-CAFDC---LSELGPICAREGLWLHIDAAYAG 282 (481)
T ss_dssp -TCEEEEECCCTTSCCCHHHHHHHHHHHHH-TTCEEEEEEEEBSCTTT-CCBCC---HHHHHHHHHHHTCEEEEECTTGG
T ss_pred -CCceEEEEcCCCCcCCHHHHHHHHHHHHh-CCCCcEEEEEecCCCCC-cCcCC---HHHHHHHHHHcCCeEEeehhhHH
Confidence 88899999877889999999999986322 22237788888888888 89988 99999999999999999999883
Q ss_pred hh-------hh---cccCCeEEEecccccCcc--eeEEeecCccc
Q psy5413 250 LA-------EV---CASVDTVMFCLSKGLGAP--VGSILAGPEEF 282 (285)
Q Consensus 250 ~~-------~~---~~~~dv~~~s~sK~l~~p--~gg~~~~~~~~ 282 (285)
.. .. .+.+|++++++|||+++| .|++++.++++
T Consensus 283 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~ 327 (481)
T 4e1o_A 283 TAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYK 327 (481)
T ss_dssp GGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHH
T ss_pred HHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHH
Confidence 21 11 134699999999999985 34556666554
No 114
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.87 E-value=2.7e-21 Score=176.41 Aligned_cols=208 Identities=19% Similarity=0.139 Sum_probs=141.6
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCCCCc-cCChhHHHHHHHHHhHc-CCCcEEEcCChHHHHHHHHHHccc
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGDDVY-LEDPTCKELQEKAAKLA-GKEAAIFVPSGTMGNLIAIMTHCD 138 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~~l~~~la~~~-g~~~~~~~~~Gs~a~~~al~~~~~ 138 (285)
|++++||.++. .++++|++.+++.++......+ ...+...++++.+++++ +.+.++|++||++|++.+++++..
T Consensus 55 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~ 134 (434)
T 2epj_A 55 GARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARG 134 (434)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHH
T ss_pred CCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 57788987663 3457899999999877642222 24667899999999999 778889999999999999998421
Q ss_pred -cCCCeEEe-cCCcceeeeccccccccc--cc--ccccce------eeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 139 -RRDSEIIV-GDCSHIMLWEQGGASQTS--VY--SQIGRV------LMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 139 -~~g~~vi~-~~~~h~~~~~~~~~~~~~--~~--~~~~g~------~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
..+++|++ ...+|..+.......... .+ ....|. .++.++. .|+++|++++++. +++++
T Consensus 135 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~----~~~~~ 205 (434)
T 2epj_A 135 YTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEY----GDRIA 205 (434)
T ss_dssp HHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHH----GGGEE
T ss_pred hhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhC----CCCEE
Confidence 23455555 456676543221111000 00 001122 2344443 3899999999751 23789
Q ss_pred EEEEecccCCCCeeeC-CHHHHHHHHHHHHHcCCeEEEeCccCChh----hhcc----cCCeEEEecccccCc-ceeEEe
Q psy5413 207 LVCVENTHNYCGGTVL-PMQWLRELKARCQEHNIPVHMDGARLPLA----EVCA----SVDTVMFCLSKGLGA-PVGSIL 276 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~-~~~~l~~i~~la~~~gi~li~Dea~~~~~----~~~~----~~dv~~~s~sK~l~~-p~gg~~ 276 (285)
+|+++++++++ |.+. +.+++++|+++|++||++||+||+|+++. ...+ ..| +.|+||++++ ..+|++
T Consensus 206 ~vi~ep~~~~~-G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d--i~s~sK~l~~G~~~G~v 282 (434)
T 2epj_A 206 GVIVEPVIANA-GVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGD--IIVLGKIIGGGFPVGAV 282 (434)
T ss_dssp EEEECSSBCSS-SCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCS--EEEEEGGGGTTSSCEEE
T ss_pred EEEEeCCcCCC-CccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCC--eeeecchhcCCcceeee
Confidence 99999988887 6655 79999999999999999999999998542 1111 234 4588899987 335566
Q ss_pred ecCccccc
Q psy5413 277 AGPEEFIQ 284 (285)
Q Consensus 277 ~~~~~~i~ 284 (285)
++++++++
T Consensus 283 ~~~~~~~~ 290 (434)
T 2epj_A 283 AGSREVMS 290 (434)
T ss_dssp EECHHHHT
T ss_pred eecHHHHH
Confidence 66677654
No 115
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.87 E-value=2.5e-21 Score=174.73 Aligned_cols=183 Identities=17% Similarity=0.225 Sum_probs=141.6
Q ss_pred CcHHHHHHHHhccc--CCCCcc--CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceee
Q psy5413 79 PTMEMKNYMFNCEV--GDDVYL--EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIML 154 (285)
Q Consensus 79 ~~~~v~~a~~~~~~--~~~~y~--~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~ 154 (285)
..+++.+++..+.. ....|+ .++...++++.+++++|.+..+++++|++|+..++++++ ++|++|+++.+.|..+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~-~~gd~vi~~~~~~~~~ 116 (398)
T 2rfv_A 38 VFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLC-QQGDHIVSASAIYGCT 116 (398)
T ss_dssp CCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEESSSCHHH
T ss_pred ccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCCcccH
Confidence 45666666652222 223343 567899999999999999888999999999999999987 5899999988887654
Q ss_pred eccc-ccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHH
Q psy5413 155 WEQG-GASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKAR 233 (285)
Q Consensus 155 ~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~l 233 (285)
.... ... ...|.+++.++.. |++++++++++ ++++|++++|+||+ |.++| +++|+++
T Consensus 117 ~~~~~~~~------~~~g~~~~~v~~~-----d~~~l~~~i~~-------~~~~v~~~~~~npt-G~~~~---l~~i~~l 174 (398)
T 2rfv_A 117 HAFLSHSM------PKFGINVRFVDAA-----KPEEIRAAMRP-------ETKVVYIETPANPT-LSLVD---IETVAGI 174 (398)
T ss_dssp HHHHHTHH------HHTTCEEEEECTT-----SHHHHHHHCCT-------TEEEEEEESSBTTT-TBCCC---HHHHHHH
T ss_pred HHHHHHHH------HHcCCEEEEeCCC-----CHHHHHHhcCC-------CCeEEEEECCCCCC-CcccC---HHHHHHH
Confidence 3321 111 2347888888763 89999999987 79999999999999 89999 9999999
Q ss_pred HHHcCCeEEEeCccCC-h--hhhcccCCeEEEecccccCc---ceeEEeecCccccc
Q psy5413 234 CQEHNIPVHMDGARLP-L--AEVCASVDTVMFCLSKGLGA---PVGSILAGPEEFIQ 284 (285)
Q Consensus 234 a~~~gi~li~Dea~~~-~--~~~~~~~dv~~~s~sK~l~~---p~gg~~~~~~~~i~ 284 (285)
|++||+++|+||+|.. . .....+.|+++.|+||++++ +.||+++.++++++
T Consensus 175 ~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~ 231 (398)
T 2rfv_A 175 AHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFID 231 (398)
T ss_dssp HHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHH
T ss_pred HHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHH
Confidence 9999999999999882 1 12234689999999999976 34688888776653
No 116
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.87 E-value=1.2e-21 Score=175.93 Aligned_cols=197 Identities=11% Similarity=0.051 Sum_probs=145.2
Q ss_pred eeeeeccCCcC-CCcHHHHHHHHhcccC-CCCccCChhHHH-HHHHHHhHc----C----CCcEEEcCChHHHHHHHHHH
Q psy5413 67 RTVDIRSDTIS-KPTMEMKNYMFNCEVG-DDVYLEDPTCKE-LQEKAAKLA----G----KEAAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 67 ~~~~~~~~~~~-~~~~~v~~a~~~~~~~-~~~y~~~~~~~~-l~~~la~~~----g----~~~~~~~~~Gs~a~~~al~~ 135 (285)
+++||..+.+. .++|++.+++.++... ...|... ..+ +++.+++++ | .+.+++++||++|+..++++
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~ 106 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQ 106 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence 56888776654 3678999999887643 3445532 556 888888875 4 24579999999999999999
Q ss_pred ccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCC---CCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 136 HCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKD---GTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 136 ~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
++ ++|++|++..++|....... ...|.+++.++.+++ +.+|+++|++++++. ++++|++++
T Consensus 107 l~-~~gd~vl~~~p~y~~~~~~~---------~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~~v~l~~ 170 (390)
T 1d2f_A 107 WS-ETGEGVVIHTPAYDAFYKAI---------EGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP------ECKIMLLCS 170 (390)
T ss_dssp SS-CTTCEEEEEESCCHHHHHHH---------HHTTCEEEEEECEECSSSEECCHHHHHHHHTST------TEEEEEEES
T ss_pred hc-CCCCEEEEcCCCcHHHHHHH---------HHCCCEEEEeecccCCCccccCHHHHHHHhccC------CCeEEEEeC
Confidence 87 58999998877665443211 234778888876433 248999999999752 689999999
Q ss_pred ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------h---hcccC-CeEEEecccccCc--ceeEEeec-
Q psy5413 213 THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------E---VCASV-DTVMFCLSKGLGA--PVGSILAG- 278 (285)
Q Consensus 213 ~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~---~~~~~-dv~~~s~sK~l~~--p~gg~~~~- 278 (285)
|+||+ |.++|.+++++|+++|++||+++|+||+|+.+. . +.... |. +.|+||+++. .+.|+++.
T Consensus 171 p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~ 248 (390)
T 1d2f_A 171 PQNPT-GKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIE 248 (390)
T ss_dssp SCTTT-CCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEEC
T ss_pred CCCCC-CcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEEC
Confidence 99999 899999999999999999999999999987321 1 11122 66 9999999863 44566654
Q ss_pred Ccccc
Q psy5413 279 PEEFI 283 (285)
Q Consensus 279 ~~~~i 283 (285)
+++++
T Consensus 249 ~~~~~ 253 (390)
T 1d2f_A 249 NSSSR 253 (390)
T ss_dssp SHHHH
T ss_pred CHHHH
Confidence 55654
No 117
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=3.7e-21 Score=176.05 Aligned_cols=163 Identities=17% Similarity=0.236 Sum_probs=134.1
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecccc-cccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGG-ASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~~~~~~~g~~~~~~ 177 (285)
.++...++++.+++++|.+..+++++|++|+..++++++ ++||+|+++.+.|..+..... .. ...|.+++.+
T Consensus 112 ~~~~~~~l~~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~-~~Gd~Vi~~~~~y~~~~~~~~~~~------~~~G~~v~~v 184 (445)
T 1qgn_A 112 GNPTTVVLEEKISALEGAESTLLMASGMCASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETIL------PKMGITATVI 184 (445)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHS-CSSCEEEEETTSCHHHHHHHHHTG------GGGTCEEEEE
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHHH------HHcCCEEEEe
Confidence 568899999999999999888999999999999999876 589999998877765433111 11 3458888888
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCce-EEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh---hhh
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCAST-SLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---AEV 253 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~-~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---~~~ 253 (285)
+.. |+++++++|++ ++ ++|++++|+||+ |.+.| +++|+++|++||+++|+|++|+.. ...
T Consensus 185 ~~~-----d~~~l~~ai~~-------~tv~lV~le~p~Npt-G~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~~~ 248 (445)
T 1qgn_A 185 DPA-----DVGALELALNQ-------KKVNLFFTESPTNPF-LRCVD---IELVSKLCHEKGALVCIDGTFATPLNQKAL 248 (445)
T ss_dssp CSS-----CHHHHHHHHHH-------SCEEEEEEESSCTTT-CCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCCTT
T ss_pred CCC-----CHHHHHHHhcc-------CCCCEEEEeCCCCCC-CcccC---HHHHHHHHHHcCCEEEEECCCcccccCCcc
Confidence 763 89999999987 67 999999999999 89999 999999999999999999999822 122
Q ss_pred cccCCeEEEecccccCcc---eeEEeecCccccc
Q psy5413 254 CASVDTVMFCLSKGLGAP---VGSILAGPEEFIQ 284 (285)
Q Consensus 254 ~~~~dv~~~s~sK~l~~p---~gg~~~~~~~~i~ 284 (285)
..++|+++.|+||++++. ++|++++++++++
T Consensus 249 ~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~ 282 (445)
T 1qgn_A 249 ALGADLVLHSATKFLGGHNDVLAGCISGPLKLVS 282 (445)
T ss_dssp TTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHH
T ss_pred ccCCEEEEECCcccccccccceEEEEEECHHHHH
Confidence 347899999999999985 4888888877654
No 118
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.87 E-value=1.3e-21 Score=177.38 Aligned_cols=207 Identities=14% Similarity=0.086 Sum_probs=151.4
Q ss_pred CCeeeeeccCCc------CCCcHHHHHHHHhccc-CCCCccCChhHHHHHHHHHhHc----CCC---cEEEcCChHHHHH
Q psy5413 65 NIRTVDIRSDTI------SKPTMEMKNYMFNCEV-GDDVYLEDPTCKELQEKAAKLA----GKE---AAIFVPSGTMGNL 130 (285)
Q Consensus 65 ~~~~~~~~~~~~------~~~~~~v~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~----g~~---~~~~~~~Gs~a~~ 130 (285)
+..+++|..+.+ ..+.+.+.+++.+... +...|.......++++.+++++ +.+ .+++++||++|+.
T Consensus 37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~ 116 (418)
T 3rq1_A 37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIH 116 (418)
T ss_dssp GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHH
T ss_pred CCCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHH
Confidence 346788888764 3367788888876543 2345665556788888888875 456 6799999999999
Q ss_pred HHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC-CCCCCCHHHHHHHhcccccccCCceEEEE
Q psy5413 131 IAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSLVC 209 (285)
Q Consensus 131 ~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 209 (285)
.++++++ ++||+|+++.++|....... ...|.+++.++.. +++.+|++++++++++... ....++|+
T Consensus 117 ~~~~~l~-~~gd~Vl~~~p~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~--~~~~~~vi 184 (418)
T 3rq1_A 117 HLIHNYT-EPGDEVLTADWYWGAYRVIC---------SDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAA--KQTNVVVI 184 (418)
T ss_dssp HHHHHHS-CTTCEEEEESSCCTHHHHHH---------HHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHH--HCSEEEEE
T ss_pred HHHHHhc-CCCCEEEECCCCchhHHHHH---------HHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhc--cCCCEEEE
Confidence 9999987 68999999888775543322 2448888888863 4567899999999974100 01345899
Q ss_pred Eecc-cCCCCeeeCCHHHHHHHHHHHH------HcCCeEEEeCccCChh-------hhc---cc--CC---eEEEecccc
Q psy5413 210 VENT-HNYCGGTVLPMQWLRELKARCQ------EHNIPVHMDGARLPLA-------EVC---AS--VD---TVMFCLSKG 267 (285)
Q Consensus 210 i~~~-~n~~gG~~~~~~~l~~i~~la~------~~gi~li~Dea~~~~~-------~~~---~~--~d---v~~~s~sK~ 267 (285)
+++| +||| |.+++.+++++|+++|+ +||+++|+||+|..+. .+. .. -+ +++.|+||.
T Consensus 185 ~~~p~~NPt-G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 263 (418)
T 3rq1_A 185 FNTPGNNPT-GYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKG 263 (418)
T ss_dssp EECSSCTTT-CCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTT
T ss_pred EeCCCCCCC-CCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCC
Confidence 9999 9999 99999999999999999 8999999999986221 111 11 13 458899999
Q ss_pred cCc--ceeEEeec---Cccccc
Q psy5413 268 LGA--PVGSILAG---PEEFIQ 284 (285)
Q Consensus 268 l~~--p~gg~~~~---~~~~i~ 284 (285)
+++ .+.|++++ ++++++
T Consensus 264 ~~~~G~r~G~~~~~~~~~~~~~ 285 (418)
T 3rq1_A 264 FTMYGQRVGAMIGISDDEEIAD 285 (418)
T ss_dssp TTCCSSCCEEEEEEESSHHHHH
T ss_pred CcCcCCcceEEEEEeCCHHHHH
Confidence 864 45567766 776654
No 119
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.87 E-value=1.1e-21 Score=177.76 Aligned_cols=206 Identities=17% Similarity=0.120 Sum_probs=150.5
Q ss_pred CCeeeeeccCCc-----C-CCcHHHHHHHHhccc-CCCCccCChhHHHHHHHHHhHc----CCC---cEEEcCChHHHHH
Q psy5413 65 NIRTVDIRSDTI-----S-KPTMEMKNYMFNCEV-GDDVYLEDPTCKELQEKAAKLA----GKE---AAIFVPSGTMGNL 130 (285)
Q Consensus 65 ~~~~~~~~~~~~-----~-~~~~~v~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~----g~~---~~~~~~~Gs~a~~ 130 (285)
++.+++|..+.+ . .+.+.+.+++.+... +...|.......++++.+++++ +.+ .+++++||++|+.
T Consensus 36 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~ 115 (413)
T 3t18_A 36 REAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIR 115 (413)
T ss_dssp GGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHH
T ss_pred ccceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHH
Confidence 456788888875 2 266788888876543 2345665556778888888865 445 6799999999999
Q ss_pred HHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeec-CCCCCCCHHHHHHHhcccccccCCceE-EE
Q psy5413 131 IAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN-QKDGTFDLDEMEAKFSTADNIHCASTS-LV 208 (285)
Q Consensus 131 ~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~-~v 208 (285)
.++++++ ++||+|+++.++|....... ...|.+++.++. .+++.+|+++|++++++... .+++ +|
T Consensus 116 ~~~~~~~-~~gd~Vl~~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~~~~v 182 (413)
T 3t18_A 116 SAIFSYL-DEGDPLICHDYYWAPYRKIC---------EEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIR---DSDRIAS 182 (413)
T ss_dssp HHHHHHC-CSSCEEEEESSCCTHHHHHH---------HHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHH---HCSEEEE
T ss_pred HHHHHhc-CCCCEEEECCCCcccHHHHH---------HHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhh---cCCCEEE
Confidence 9999987 68999999888775543322 234888888886 34568999999999974100 0344 88
Q ss_pred EEecc-cCCCCeeeCCHHHHHHHHHHHH------HcCCeEEEeCccCChh-------h---hccc--CC---eEEEeccc
Q psy5413 209 CVENT-HNYCGGTVLPMQWLRELKARCQ------EHNIPVHMDGARLPLA-------E---VCAS--VD---TVMFCLSK 266 (285)
Q Consensus 209 ~i~~~-~n~~gG~~~~~~~l~~i~~la~------~~gi~li~Dea~~~~~-------~---~~~~--~d---v~~~s~sK 266 (285)
++++| +||| |.+++.+++++|+++|+ +||++||+||+|..+. . .... .+ +++.|+||
T Consensus 183 i~~~p~~NPt-G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 261 (413)
T 3t18_A 183 LINSPGNNPT-GYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSK 261 (413)
T ss_dssp EEECSSCTTT-CCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHH
T ss_pred EEeCCCCCCC-CCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCc
Confidence 99999 9999 99999999999999999 8999999999976211 1 1111 12 45889999
Q ss_pred ccCc--ceeEEeec---Cccccc
Q psy5413 267 GLGA--PVGSILAG---PEEFIQ 284 (285)
Q Consensus 267 ~l~~--p~gg~~~~---~~~~i~ 284 (285)
.++. .+.|++++ ++++++
T Consensus 262 ~~~~~G~riG~~~~~~~~~~~~~ 284 (413)
T 3t18_A 262 SHTAYGLRSGAAVGISSSKEIIE 284 (413)
T ss_dssp HTTCGGGCCEEEEEEESCHHHHH
T ss_pred cCCCcCcCcEEEEEecCCHHHHH
Confidence 9884 45567766 676653
No 120
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.87 E-value=1.3e-21 Score=174.34 Aligned_cols=199 Identities=11% Similarity=0.053 Sum_probs=147.0
Q ss_pred CCeeeeeccCCcC-CCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccccCC
Q psy5413 65 NIRTVDIRSDTIS-KPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCDRRD 141 (285)
Q Consensus 65 ~~~~~~~~~~~~~-~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~~~g 141 (285)
++.++||.++... .+++++.+++.++......|. .+...++++.++++++.+ .+++++||++++..+++++ +|
T Consensus 23 ~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~-~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~---~g 98 (364)
T 1lc5_A 23 PDQLLDFSANINPLGMPVSVKRALIDNLDCIERYP-DADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL---KP 98 (364)
T ss_dssp GGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCC-CTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH---CC
T ss_pred ccceEEeccccCCCCCCHHHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc---CC
Confidence 4568899876543 378899999988765434554 345789999999999864 5799999999999999986 56
Q ss_pred CeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCC-HHHHHHHhcccccccCCceEEEEEecccCCCCee
Q psy5413 142 SEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFD-LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGT 220 (285)
Q Consensus 142 ~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d-~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~ 220 (285)
++|++..++|...... . ...|.+++.++.++...++ ++++.+.+.+ ++++|++++|+||+ |.
T Consensus 99 d~vl~~~p~y~~~~~~---~------~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~-------~~~~v~i~~p~npt-G~ 161 (364)
T 1lc5_A 99 RRAMIVTPGFAEYGRA---L------AQSGCEIRRWSLREADGWQLTDAILEALTP-------DLDCLFLCTPNNPT-GL 161 (364)
T ss_dssp SEEEEEESCCTHHHHH---H------HHTTCEEEEEECCGGGTTCCCTTHHHHCCT-------TCCEEEEESSCTTT-CC
T ss_pred CeEEEeCCCcHHHHHH---H------HHcCCeEEEEeCCcccccchhHHHHHhccC-------CCCEEEEeCCCCCC-CC
Confidence 8888877766443321 1 2347788888875322233 4555555544 68899999999999 89
Q ss_pred eCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc--ccCCeEEEecccccCc--ceeEEee-cCccccc
Q psy5413 221 VLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC--ASVDTVMFCLSKGLGA--PVGSILA-GPEEFIQ 284 (285)
Q Consensus 221 ~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~--~~~dv~~~s~sK~l~~--p~gg~~~-~~~~~i~ 284 (285)
++|.+++++|+++|++||+++|+||+|..+. ... ...++++.|+||+++. .+.|+++ .++++++
T Consensus 162 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 237 (364)
T 1lc5_A 162 LPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMA 237 (364)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHH
T ss_pred CCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHH
Confidence 9999999999999999999999999987321 111 2345669999999973 4557777 8877653
No 121
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.87 E-value=1.1e-21 Score=175.30 Aligned_cols=196 Identities=14% Similarity=0.088 Sum_probs=142.0
Q ss_pred eeeccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCC------CcEEEcCChHHHHHHHHHHccc--cC
Q psy5413 69 VDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGK------EAAIFVPSGTMGNLIAIMTHCD--RR 140 (285)
Q Consensus 69 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~------~~~~~~~~Gs~a~~~al~~~~~--~~ 140 (285)
+.|..+ +...++++.+++.+....+..........++++.++++++. +.+++++||++|+..+++++.. ++
T Consensus 7 ~~~~p~-p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~ 85 (385)
T 2bkw_A 7 TLLIPG-PIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAP 85 (385)
T ss_dssp EECSSS-SCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCS
T ss_pred eeecCC-CcCchHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCC
Confidence 444443 45678899999887654321000112467888999999875 3468999999999999998752 48
Q ss_pred CCeEEec-CCcceeeecccccccccccccccceeeeeeec-CCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCC
Q psy5413 141 DSEIIVG-DCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN-QKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCG 218 (285)
Q Consensus 141 g~~vi~~-~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~g 218 (285)
|++|++. .+++..... ... ...|.+++.++. ++++.+|+++|++++++. ++++|++++++|++
T Consensus 86 gd~vlv~~~~~~~~~~~--~~~------~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~~v~~~~~~npt- 150 (385)
T 2bkw_A 86 NKNVLVVSTGTFSDRFA--DCL------RSYGAQVDVVRPLKIGESVPLELITEKLSQN------SYGAVTVTHVDTST- 150 (385)
T ss_dssp CCEEEEECSSHHHHHHH--HHH------HHTTCEEEEECCSSTTSCCCHHHHHHHHHHS------CCSEEEEESEETTT-
T ss_pred CCeEEEEcCCcchHHHH--HHH------HHcCCceEEEecCCCCCCCCHHHHHHHHhcC------CCCEEEEEccCCCc-
Confidence 8988765 433322210 111 234788888887 677779999999999752 57899999999999
Q ss_pred eeeCCHHHHHHHHHHHHHc--CCeEEEeCccC-Chh--hhc-ccCCeEEEecccccCccee-EEeecCcccc
Q psy5413 219 GTVLPMQWLRELKARCQEH--NIPVHMDGARL-PLA--EVC-ASVDTVMFCLSKGLGAPVG-SILAGPEEFI 283 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~--gi~li~Dea~~-~~~--~~~-~~~dv~~~s~sK~l~~p~g-g~~~~~~~~i 283 (285)
|.++| +++|+++|++| |+++|+||+|+ +.. .+. .+.|+++.|+||++++|.| |+++.+++++
T Consensus 151 G~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~ 219 (385)
T 2bkw_A 151 AVLSD---LKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFM 219 (385)
T ss_dssp TEECC---HHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHH
T ss_pred CeEcC---HHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHH
Confidence 89999 99999999999 99999999987 211 111 2578899999999887433 6777776554
No 122
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.87 E-value=2.3e-21 Score=174.89 Aligned_cols=205 Identities=20% Similarity=0.165 Sum_probs=142.4
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccCC---CCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHcc
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVGD---DVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~---~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~ 137 (285)
|++++||.++ +.++++|++.+++.++.... ......+...++++.++++++.+.+++++||++|++.++++++
T Consensus 38 g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~ 117 (406)
T 4adb_A 38 GKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLAR 117 (406)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHH
T ss_pred CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHH
Confidence 5677888765 33457899999998876531 1222467799999999999999999999999999999999876
Q ss_pred cc------CC-CeEEec-CCcceeeeccccccccccccc---ccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 138 DR------RD-SEIIVG-DCSHIMLWEQGGASQTSVYSQ---IGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 138 ~~------~g-~~vi~~-~~~h~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
.. +| ++|++. ..+|.+............+.. ..+..+..++. .|+++|++++++ +++
T Consensus 118 ~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~-------~~~ 185 (406)
T 4adb_A 118 KFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALIDD-------STC 185 (406)
T ss_dssp HHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCST-------TEE
T ss_pred HHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhcC-------CeE
Confidence 42 55 677765 455655432221110111100 11123333333 389999999976 899
Q ss_pred EEEEecccCCCCeee-CCHHHHHHHHHHHHHcCCeEEEeCccCChhh---------hcccCCeEEEecccccCc-ceeEE
Q psy5413 207 LVCVENTHNYCGGTV-LPMQWLRELKARCQEHNIPVHMDGARLPLAE---------VCASVDTVMFCLSKGLGA-PVGSI 275 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~-~~~~~l~~i~~la~~~gi~li~Dea~~~~~~---------~~~~~dv~~~s~sK~l~~-p~gg~ 275 (285)
+|+++ |+|++||.+ ++.+++++|+++|++||++||+||+|+++.. .....|++ ++||++++ .++|+
T Consensus 186 ~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~~G~r~G~ 262 (406)
T 4adb_A 186 AVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALGGGFPVGA 262 (406)
T ss_dssp EEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEE
T ss_pred EEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--EechhhcCCCCeEE
Confidence 99999 788885554 3889999999999999999999999973311 11234554 67999976 45677
Q ss_pred eecCccccc
Q psy5413 276 LAGPEEFIQ 284 (285)
Q Consensus 276 ~~~~~~~i~ 284 (285)
++.++++++
T Consensus 263 ~~~~~~~~~ 271 (406)
T 4adb_A 263 LLATEECAR 271 (406)
T ss_dssp EEECHHHHH
T ss_pred EEEcHHHHh
Confidence 888777654
No 123
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.86 E-value=8.9e-22 Score=176.88 Aligned_cols=192 Identities=14% Similarity=0.098 Sum_probs=146.0
Q ss_pred ccCCcCCCcHHHHHHHHhcccCCCCcc--CChhHHHHHHHHHhHcCCC---cEEEcCChHHHHHHHHHHccccCCCeEEe
Q psy5413 72 RSDTISKPTMEMKNYMFNCEVGDDVYL--EDPTCKELQEKAAKLAGKE---AAIFVPSGTMGNLIAIMTHCDRRDSEIIV 146 (285)
Q Consensus 72 ~~~~~~~~~~~v~~a~~~~~~~~~~y~--~~~~~~~l~~~la~~~g~~---~~~~~~~Gs~a~~~al~~~~~~~g~~vi~ 146 (285)
.+.++...++++.+++.+....+ |. ......++++.+++++|.+ .+++++||++|+..++.+++ ++|++|++
T Consensus 22 ~~~~p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~-~~gd~vl~ 98 (396)
T 2ch1_A 22 MGPGPSNCSKRVLTAMTNTVLSN--FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLL-EEGDRVLI 98 (396)
T ss_dssp CSSSSCCCCHHHHHHTTSCCCCT--TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC-CTTCEEEE
T ss_pred ecCCCCCCCHHHHHHhccccccC--CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhc-CCCCeEEE
Confidence 34555667899999998765432 32 1235889999999999875 36799999999999999987 58999999
Q ss_pred cCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHH
Q psy5413 147 GDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQW 226 (285)
Q Consensus 147 ~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~ 226 (285)
+.++|.... ..... ...|.+++.++.++++.+|+++|++++++. ++++|++++++||+ |.++|
T Consensus 99 ~~~~~~~~~-~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~~v~~~~~~npt-G~~~~--- 161 (396)
T 2ch1_A 99 AVNGIWAER-AVEMS------ERYGADVRTIEGPPDRPFSLETLARAIELH------QPKCLFLTHGDSSS-GLLQP--- 161 (396)
T ss_dssp EESSHHHHH-HHHHH------HHTTCEEEEEECCTTSCCCHHHHHHHHHHH------CCSEEEEESEETTT-TEECC---
T ss_pred EcCCcccHH-HHHHH------HHcCCceEEecCCCCCCCCHHHHHHHHHhC------CCCEEEEECCCCCC-ceecC---
Confidence 887775542 11122 345888888888777789999999999762 57899999999999 89999
Q ss_pred HHHHHHHHHHcCCeEEEeCccC-Chhh---hcccCCeEEEecccccCcc-eeEEeecCcccc
Q psy5413 227 LRELKARCQEHNIPVHMDGARL-PLAE---VCASVDTVMFCLSKGLGAP-VGSILAGPEEFI 283 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea~~-~~~~---~~~~~dv~~~s~sK~l~~p-~gg~~~~~~~~i 283 (285)
+++|+++|++||+++|+||+|. +... ...+.|+++.+++|+++++ ..|+++.+++++
T Consensus 162 ~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~ 223 (396)
T 2ch1_A 162 LEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKAL 223 (396)
T ss_dssp CTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHH
T ss_pred HHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHH
Confidence 8999999999999999999988 1111 1124688899999998873 336776666544
No 124
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.86 E-value=3.4e-21 Score=173.80 Aligned_cols=162 Identities=20% Similarity=0.165 Sum_probs=132.9
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccc-ccccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQG-GASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~~~~~~~g~~~~~~ 177 (285)
.++...++++.+++++|.+.+++++||++|++.++++++ ++|++|++..+.|..+.... ... ...|.+++.+
T Consensus 64 ~~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~~al~~~~-~~gd~Vi~~~~~y~~~~~~~~~~~------~~~g~~~~~v 136 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDAAFGRAFSSGMAAADCALRAML-RPGDHVVIPDDAYGGTFRLIDKVF------TGWNVEYTPV 136 (392)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHHTG------GGGTCEEEEE
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCCcchHHHHHHHHH------HhcCcEEEEe
Confidence 568899999999999999989999999999999999876 68999999887775433211 111 3457888888
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh---hhc
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA---EVC 254 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~---~~~ 254 (285)
+.+ |++++++++++ ++++|++++|+|++ |.+.| +++|+++|++||+++|+|++|+... ...
T Consensus 137 ~~~-----d~~~l~~~i~~-------~~~~v~~~~~~npt-G~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~~~~ 200 (392)
T 3qhx_A 137 ALA-----DLDAVRAAIRP-------TTRLIWVETPTNPL-LSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQPLS 200 (392)
T ss_dssp CTT-----CHHHHHHHCCT-------TEEEEEEESSCTTT-CCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCCGGG
T ss_pred CCC-----CHHHHHHhhCC-------CCeEEEEECCCCCC-cEEec---HHHHHHHHHHcCCEEEEECCCcccccCChHH
Confidence 763 89999999987 89999999999999 89999 9999999999999999999988321 233
Q ss_pred ccCCeEEEecccccCc---ceeEEeecC-cccc
Q psy5413 255 ASVDTVMFCLSKGLGA---PVGSILAGP-EEFI 283 (285)
Q Consensus 255 ~~~dv~~~s~sK~l~~---p~gg~~~~~-~~~i 283 (285)
.+.|+++.|++|++++ +++|+++.+ ++++
T Consensus 201 ~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~ 233 (392)
T 3qhx_A 201 LGADVVLHSTTKYIGGHSDVVGGALVTNDEELD 233 (392)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHH
T ss_pred hCCcEEEEcCccccCCCCCceEEEEEECcHHHH
Confidence 5789999999999987 357888776 4543
No 125
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.86 E-value=2.7e-21 Score=177.35 Aligned_cols=216 Identities=15% Similarity=0.082 Sum_probs=139.8
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccCC---CCccCChhHHHHHHHHHhHcCCC-cEEEcCChHHHHHHHHHHc
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVGD---DVYLEDPTCKELQEKAAKLAGKE-AAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~---~~y~~~~~~~~l~~~la~~~g~~-~~~~~~~Gs~a~~~al~~~ 136 (285)
|++++||.++ +.++++|++.+|+.+++... .....++...++++.++++++.+ .++|++||++|++.+++++
T Consensus 48 g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~ 127 (452)
T 3n5m_A 48 GKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIA 127 (452)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHH
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHH
Confidence 5667777655 34557899999998877532 12234677899999999998643 2899999999999999998
Q ss_pred ccc-------CCCeEEe-cCCcceeeeccccccccccccccc---ceeeeeeecCCC--C-CCC---------HHHHHHH
Q psy5413 137 CDR-------RDSEIIV-GDCSHIMLWEQGGASQTSVYSQIG---RVLMRGVTNQKD--G-TFD---------LDEMEAK 193 (285)
Q Consensus 137 ~~~-------~g~~vi~-~~~~h~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~--~-~~d---------~~~l~~~ 193 (285)
+.. ++++|++ ...||+++...........+...+ ...+..++.... . ..| +++|+++
T Consensus 128 ~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 207 (452)
T 3n5m_A 128 RQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRV 207 (452)
T ss_dssp HHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHH
Confidence 732 4566666 456676553222111111111111 111222222111 1 112 8999999
Q ss_pred hcccccccCCceEEEEEecc-cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-----hhcccCCeE--EEecc
Q psy5413 194 FSTADNIHCASTSLVCVENT-HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-----EVCASVDTV--MFCLS 265 (285)
Q Consensus 194 i~~~~~~~~~~~~~v~i~~~-~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-----~~~~~~dv~--~~s~s 265 (285)
+++. +.+++++|+++++ +| +|..+.+.+++++|+++|++||++||+||+|+++. ...+..++. +.++|
T Consensus 208 l~~~---~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~s 283 (452)
T 3n5m_A 208 MTWE---LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMA 283 (452)
T ss_dssp HHHH---CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC
T ss_pred HHhc---CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeec
Confidence 9721 2237999999999 89 84455588999999999999999999999988432 122333332 56788
Q ss_pred cccCc--ceeEEeecCccccc
Q psy5413 266 KGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 266 K~l~~--p~gg~~~~~~~~i~ 284 (285)
|++++ ...|++++++++++
T Consensus 284 K~l~~G~~~ig~~~~~~~i~~ 304 (452)
T 3n5m_A 284 KGITSAYLPLSATAVKREIYE 304 (452)
T ss_dssp GGGGTTSSCCEEEEEEHHHHG
T ss_pred ccccCCCcceEEEEECHHHHH
Confidence 99875 23356666776654
No 126
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.86 E-value=4.1e-21 Score=173.46 Aligned_cols=162 Identities=20% Similarity=0.231 Sum_probs=132.6
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccc-ccccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQG-GASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~~~~~~~g~~~~~~ 177 (285)
.++...++++.+++++|.+..+++++|++|+..++++++ ++|++|+++.+.|..+.... ... ...|.+++.+
T Consensus 63 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~-~~gd~vl~~~~~~~~~~~~~~~~~------~~~g~~~~~~ 135 (398)
T 1gc0_A 63 SNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLL-RPGDEVLLGNTLYGCTFAFLHHGI------GEFGVKLRHV 135 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEESSCCSHHHHHHHHTG------GGGTCEEEEE
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-cCCCEEEEeCCCchhHHHHHHHHH------HHcCCEEEEE
Confidence 578899999999999999888999999999999999986 58999999888776543321 111 2347777777
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh---hhc
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA---EVC 254 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~---~~~ 254 (285)
+.. |+++++++|++ ++++|++++|+|++ |.++| +++|+++|++||+++|+||+|.... .+.
T Consensus 136 ~~~-----d~~~l~~~i~~-------~~~~v~~~~~~npt-G~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~ 199 (398)
T 1gc0_A 136 DMA-----DLQALEAAMTP-------ATRVIYFESPANPN-MHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQRPLE 199 (398)
T ss_dssp CTT-----CHHHHHHHCCT-------TEEEEEEESSCTTT-CCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCCGGG
T ss_pred CCC-----CHHHHHHhcCC-------CCeEEEEECCCCCC-ccccc---HHHHHHHHHHcCCEEEEECCCcccccCCchh
Confidence 652 89999999987 89999999999999 89998 9999999999999999999998221 223
Q ss_pred ccCCeEEEecccccCcc---eeEEeecCcccc
Q psy5413 255 ASVDTVMFCLSKGLGAP---VGSILAGPEEFI 283 (285)
Q Consensus 255 ~~~dv~~~s~sK~l~~p---~gg~~~~~~~~i 283 (285)
.+.|+++.|+||++++| .||+++.+++++
T Consensus 200 ~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~ 231 (398)
T 1gc0_A 200 LGADLVVHSATKYLSGHGDITAGIVVGSQALV 231 (398)
T ss_dssp GTCSEEEEETTTTTTCSSSCCCEEEEECHHHH
T ss_pred hCceEEEECCccccCCCCCCeEEEEEEChHHH
Confidence 46899999999999974 478888876654
No 127
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.86 E-value=8.2e-22 Score=175.93 Aligned_cols=187 Identities=15% Similarity=0.108 Sum_probs=145.8
Q ss_pred eeeeeccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc-cccCCCeEE
Q psy5413 67 RTVDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH-CDRRDSEII 145 (285)
Q Consensus 67 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~-~~~~g~~vi 145 (285)
.++++..+.+.... +.+++.+..... .|...+...++++.++++++.+.+++++||++|++.+++++ + ++|++|+
T Consensus 7 ~~~~l~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~-~~gd~v~ 82 (374)
T 3uwc_A 7 PYSYLERQFADIEP--YLNDLREFIKTA-DFTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNI-GAGDEVI 82 (374)
T ss_dssp CSCCHHHHTSSCHH--HHHHHHHHHHHT-CCSSCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTC-CTTCEEE
T ss_pred eeeccccCCCCchH--HHHHHHHHHHcC-CcccChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCC-CCCCEEE
Confidence 34555555544332 777777655432 46667889999999999999998999999999999999998 5 6899999
Q ss_pred ecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHH
Q psy5413 146 VGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQ 225 (285)
Q Consensus 146 ~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~ 225 (285)
++.++|....... ...|.+++.++.++++.+|++++++++++ ++++|+ ++|++ |.+.+
T Consensus 83 ~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~v~---~~n~~-G~~~~-- 140 (374)
T 3uwc_A 83 TCANTFIASVGAI---------VQAGATPVLVDSENGYVIDPEKIEAAITD-------KTKAIM---PVHYT-GNIAD-- 140 (374)
T ss_dssp EESSSCHHHHHHH---------HHTTCEEEEECBCTTSSBCGGGTGGGCCT-------TEEEEC---CBCGG-GCCCC--
T ss_pred ECCCccHHHHHHH---------HHcCCEEEEEecCCCCCcCHHHHHHhCCC-------CceEEE---EeCCc-CCcCC--
Confidence 9988886654422 23488888888766777899999999987 788888 67777 88888
Q ss_pred HHHHHHHHHHHcCCeEEEeCccCCh-h----hhcccCCeEEEecc--cccCc-ceeEEeecCc
Q psy5413 226 WLRELKARCQEHNIPVHMDGARLPL-A----EVCASVDTVMFCLS--KGLGA-PVGSILAGPE 280 (285)
Q Consensus 226 ~l~~i~~la~~~gi~li~Dea~~~~-~----~~~~~~dv~~~s~s--K~l~~-p~gg~~~~~~ 280 (285)
+++|+++|++||+++|+||+|+.. . ......|+++.|+| |++++ +.||+++.++
T Consensus 141 -~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~ 202 (374)
T 3uwc_A 141 -MPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHS 202 (374)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESC
T ss_pred -HHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCCcCCccceeEEEEeCC
Confidence 999999999999999999998821 1 12223689999977 99988 5677777554
No 128
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.86 E-value=7e-21 Score=172.39 Aligned_cols=163 Identities=18% Similarity=0.190 Sum_probs=132.9
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccc-ccccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQG-GASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~~~~~~~g~~~~~~ 177 (285)
..+...++++.+++++|.+..+++++|++|+..++++++ ++||+|+++++.|..+.... ... ...|.+++.+
T Consensus 60 ~~~~~~~l~~~ia~~~g~~~~i~~~~g~~ai~~~~~~l~-~~gd~Vl~~~~~y~~~~~~~~~~~------~~~g~~~~~v 132 (404)
T 1e5e_A 60 GNPTVSNLEGKIAFLEKTEACVATSSGMGAIAATVLTIL-KAGDHLISDECLYGCTHALFEHAL------TKFGIQVDFI 132 (404)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEESCCCHHHHHHHHTHH------HHTTCEEEEE
T ss_pred cChHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHh-CCCCEEEEeCCCchhHHHHHHHHH------HHcCCEEEEE
Confidence 356778999999999999888999999999999999876 58999999888876543311 011 3458888888
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHH-cCCeEEEeCccCChh---hh
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQE-HNIPVHMDGARLPLA---EV 253 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~-~gi~li~Dea~~~~~---~~ 253 (285)
+.. |++++++++++ ++++|++++|+||+ |.+++ +++|+++|++ ||+++|+||+|.... .+
T Consensus 133 ~~~-----d~~~l~~~i~~-------~t~~v~l~~p~Npt-G~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~~~ 196 (404)
T 1e5e_A 133 NTA-----IPGEVKKHMKP-------NTKIVYFETPANPT-LKIID---MERVCKDAHSQEGVLVIADNTFCSPMITNPV 196 (404)
T ss_dssp CTT-----STTHHHHHCCT-------TEEEEEEESSCTTT-CCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCCGG
T ss_pred CCC-----CHHHHHHhcCC-------CCcEEEEECCCCCC-CcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCCcc
Confidence 763 78899999987 79999999999999 89998 9999999999 999999999998322 22
Q ss_pred cccCCeEEEecccccCcc--e-eEEeecCccccc
Q psy5413 254 CASVDTVMFCLSKGLGAP--V-GSILAGPEEFIQ 284 (285)
Q Consensus 254 ~~~~dv~~~s~sK~l~~p--~-gg~~~~~~~~i~ 284 (285)
..+.|+++.|+||+++++ + +|++++++++++
T Consensus 197 ~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~ 230 (404)
T 1e5e_A 197 DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQ 230 (404)
T ss_dssp GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHH
T ss_pred ccCCEEEEEcCccccCCCCCCeEEEEEECHHHHH
Confidence 346899999999999874 2 588888877654
No 129
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.86 E-value=8e-21 Score=172.62 Aligned_cols=215 Identities=15% Similarity=0.040 Sum_probs=141.3
Q ss_pred CCeeeeeccCC----cCCC-cHHHHHHHHhcccCCCC----ccCChhHHHHHHHHHhHcCCC---cEEEcCChHHHHHHH
Q psy5413 65 NIRTVDIRSDT----ISKP-TMEMKNYMFNCEVGDDV----YLEDPTCKELQEKAAKLAGKE---AAIFVPSGTMGNLIA 132 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~-~~~v~~a~~~~~~~~~~----y~~~~~~~~l~~~la~~~g~~---~~~~~~~Gs~a~~~a 132 (285)
|+.++||.++. .+++ +|++.+++.+++..... .+.++...++++.+++++|.+ .++|++||++|++.+
T Consensus 41 g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~a 120 (419)
T 2eo5_A 41 GNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEAS 120 (419)
T ss_dssp SCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHH
T ss_pred CCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHH
Confidence 45678887654 2345 79999999887653211 134567889999999999853 579999999999999
Q ss_pred HHHccccCCCeEEecC-Ccceeeeccccccccc-ccccc---cceeeeeeecCCCCC----------------CCHHHHH
Q psy5413 133 IMTHCDRRDSEIIVGD-CSHIMLWEQGGASQTS-VYSQI---GRVLMRGVTNQKDGT----------------FDLDEME 191 (285)
Q Consensus 133 l~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~~~-~~~~~---~g~~~~~~~~~~~~~----------------~d~~~l~ 191 (285)
++++...+|++|++.+ .+|.++.....+.... .+... ....++.++.+.++. +|+++|+
T Consensus 121 i~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~ 200 (419)
T 2eo5_A 121 IKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIE 200 (419)
T ss_dssp HHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHH
Confidence 9986543488888765 5665543222111000 11111 112344555433221 3688999
Q ss_pred -HHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcc----cCCeEE
Q psy5413 192 -AKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCA----SVDTVM 261 (285)
Q Consensus 192 -~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~----~~dv~~ 261 (285)
+++++.. +.+++++|++++.+|++|..+.+.+++++|+++|++||++||+||+|+++.. ... ..| +
T Consensus 201 ~~~i~~~~--~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d--~ 276 (419)
T 2eo5_A 201 DYIFVNLV--PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPD--V 276 (419)
T ss_dssp HTHHHHTC--CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCS--E
T ss_pred HHHHhhcc--CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCC--E
Confidence 8886410 0126889999888888733577899999999999999999999999984321 112 223 4
Q ss_pred EecccccCc--ceeEEeecCcccc
Q psy5413 262 FCLSKGLGA--PVGSILAGPEEFI 283 (285)
Q Consensus 262 ~s~sK~l~~--p~gg~~~~~~~~i 283 (285)
.++||++++ .+.|+++++++++
T Consensus 277 ~t~sK~~~~G~~riG~~~~~~~~~ 300 (419)
T 2eo5_A 277 ITLAKALGGGIMPIGATIFRKDLD 300 (419)
T ss_dssp EEECGGGGTTTSCCEEEEEEGGGC
T ss_pred EEecccccCCccceEEEEEchHhh
Confidence 578999875 3346676667654
No 130
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.86 E-value=2.8e-21 Score=177.45 Aligned_cols=218 Identities=13% Similarity=0.136 Sum_probs=141.0
Q ss_pred cCCeeeeeccC----CcCCCcHHHHHHHHhcccCCC----CccCChhHHHHHHHHHhHcC---CCcEEEcCChHHHHHHH
Q psy5413 64 VNIRTVDIRSD----TISKPTMEMKNYMFNCEVGDD----VYLEDPTCKELQEKAAKLAG---KEAAIFVPSGTMGNLIA 132 (285)
Q Consensus 64 ~~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~~----~y~~~~~~~~l~~~la~~~g---~~~~~~~~~Gs~a~~~a 132 (285)
.|++++||.++ +.++.+|++.+++.+++.... ..+..+...++++.++++++ .+.++|++||++|++.|
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~A 138 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENA 138 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHH
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHH
Confidence 36778888754 335579999999998775422 12356778899999999985 35679999999999999
Q ss_pred HHHccccCC-CeEEe-cCCcceeeecccccccc-cccccc-----cceeeeeeecC-------CC----CCCCHHHHHHH
Q psy5413 133 IMTHCDRRD-SEIIV-GDCSHIMLWEQGGASQT-SVYSQI-----GRVLMRGVTNQ-------KD----GTFDLDEMEAK 193 (285)
Q Consensus 133 l~~~~~~~g-~~vi~-~~~~h~~~~~~~~~~~~-~~~~~~-----~g~~~~~~~~~-------~~----~~~d~~~l~~~ 193 (285)
+++++..+| +.|++ ...||+.+.....+... ..|... .+...+.++.. .+ ...+++.+++.
T Consensus 139 lk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (451)
T 3oks_A 139 VKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITV 218 (451)
T ss_dssp HHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHH
Confidence 999874355 45554 56777766433222111 112111 13333333310 00 01235555555
Q ss_pred hcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-----hhcccCCeE--EEeccc
Q psy5413 194 FSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-----EVCASVDTV--MFCLSK 266 (285)
Q Consensus 194 i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-----~~~~~~dv~--~~s~sK 266 (285)
+++.. +.+++++|+++++++.+|....+.+++++|+++|++||++||+||+|+++. ...+..++. +.+++|
T Consensus 219 l~~~~--~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK 296 (451)
T 3oks_A 219 IDKQI--GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAK 296 (451)
T ss_dssp HHHHT--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECG
T ss_pred HHhhc--CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehh
Confidence 54311 123789999999888875566778999999999999999999999988442 122222322 558889
Q ss_pred ccCc--ceeEEeecCccccc
Q psy5413 267 GLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 267 ~l~~--p~gg~~~~~~~~i~ 284 (285)
++++ |+| ++++++++++
T Consensus 297 ~l~~G~~iG-~v~~~~~~~~ 315 (451)
T 3oks_A 297 GIAGGLPLS-AVTGRAEIMD 315 (451)
T ss_dssp GGGTTSSCE-EEEEEHHHHT
T ss_pred hhhCCcceE-EEEECHHHHh
Confidence 9977 555 5566777654
No 131
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.86 E-value=2.1e-21 Score=178.32 Aligned_cols=214 Identities=14% Similarity=0.148 Sum_probs=140.0
Q ss_pred cCCeeeeeccC----CcCCCcHHHHHHHHhcccC--CC--CccCChhHHHHHHHHHhHcC---CCcEEEcCChHHHHHHH
Q psy5413 64 VNIRTVDIRSD----TISKPTMEMKNYMFNCEVG--DD--VYLEDPTCKELQEKAAKLAG---KEAAIFVPSGTMGNLIA 132 (285)
Q Consensus 64 ~~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~--~~--~y~~~~~~~~l~~~la~~~g---~~~~~~~~~Gs~a~~~a 132 (285)
.|++++||.++ +.++.+|+|.+|+.+++.. +. ..+.++...+|++.++++++ .+.++|++||++|++.|
T Consensus 62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~a 141 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENA 141 (453)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHH
Confidence 46888998865 3455799999999887653 22 22456778899999999986 35679999999999999
Q ss_pred HHHccccCC-CeEEe-cCCcceeeeccccccccc-ccccc-----cceeeeeeecC--CCCCCC--------HHHHHHHh
Q psy5413 133 IMTHCDRRD-SEIIV-GDCSHIMLWEQGGASQTS-VYSQI-----GRVLMRGVTNQ--KDGTFD--------LDEMEAKF 194 (285)
Q Consensus 133 l~~~~~~~g-~~vi~-~~~~h~~~~~~~~~~~~~-~~~~~-----~g~~~~~~~~~--~~~~~d--------~~~l~~~i 194 (285)
+++++..+| +.|++ ...||+.+.....+.... .|... .+...+.++.. +....+ ++.|++.+
T Consensus 142 lk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i 221 (453)
T 4ffc_A 142 IKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQI 221 (453)
T ss_dssp HHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhc
Confidence 998764344 45555 567777664332221110 11111 13333333321 101111 35555555
Q ss_pred cccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcccCCeE--EEecccc
Q psy5413 195 STADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCASVDTV--MFCLSKG 267 (285)
Q Consensus 195 ~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~~~dv~--~~s~sK~ 267 (285)
.. .++++|++++.++.+|..+.+.+++++|+++|++||++||+||+|+++.. ..+..++. +.+++|+
T Consensus 222 ~~------~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~ 295 (453)
T 4ffc_A 222 GA------QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKG 295 (453)
T ss_dssp CG------GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGG
T ss_pred CC------CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhh
Confidence 43 26899999998887755667889999999999999999999999884421 11222222 5678899
Q ss_pred cCc--ceeEEeecCccccc
Q psy5413 268 LGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 268 l~~--p~gg~~~~~~~~i~ 284 (285)
+++ |+| ++++++++++
T Consensus 296 ~~~G~~~G-~~~~~~~i~~ 313 (453)
T 4ffc_A 296 IAGGMPLS-AVTGRAELMD 313 (453)
T ss_dssp GGTTSSCE-EEEEEHHHHT
T ss_pred hcCCcCeE-EEEECHHHHh
Confidence 976 555 5666777654
No 132
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.86 E-value=7.6e-21 Score=170.64 Aligned_cols=178 Identities=16% Similarity=0.133 Sum_probs=140.5
Q ss_pred cHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc-cccCCCeEEecCCcceeeecc
Q psy5413 80 TMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH-CDRRDSEIIVGDCSHIMLWEQ 157 (285)
Q Consensus 80 ~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~-~~~~g~~vi~~~~~h~~~~~~ 157 (285)
.+++.+++.+.+.. ...|...+...++++.+++++|.+..+++++|++|+..+++++ + ++|++|+++.+.|......
T Consensus 16 ~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~-~~gd~Vi~~~~~~~~~~~~ 94 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGV-GPGTEVIVPAFTFISSSQA 94 (388)
T ss_dssp CHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTC-CTTCEEEEESSSCTHHHHH
T ss_pred CHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCC-CCcCEEEECCCccHHHHHH
Confidence 47888888877653 2345567789999999999999988888889999999999998 5 6899999988887665432
Q ss_pred cccccccccccccceeeeeeecCCC-CCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHH
Q psy5413 158 GGASQTSVYSQIGRVLMRGVTNQKD-GTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQE 236 (285)
Q Consensus 158 ~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~ 236 (285)
. ...|.+++.++.+++ +.+|+++|+++|++ ++++|+ |+|++ |.+.+ +++|+++|++
T Consensus 95 ~---------~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-------~~~~v~---~~n~t-G~~~~---l~~i~~la~~ 151 (388)
T 1b9h_A 95 A---------QRLGAVTVPVDVDAATYNLDPEAVAAAVTP-------RTKVIM---PVHMA-GLMAD---MDALAKISAD 151 (388)
T ss_dssp H---------HHTTCEEEEECBCTTTCCBCHHHHHHHCCT-------TEEEEC---CBCGG-GCCCC---HHHHHHHHHH
T ss_pred H---------HHcCCEEEEEecCCCcCCCCHHHHHHhcCc-------CceEEE---EeCCc-cCcCC---HHHHHHHHHH
Confidence 2 234888888887653 67899999999976 788888 77888 88888 9999999999
Q ss_pred cCCeEEEeCccC-Chhh----hcccCCeEEEecc--cccCcceeEEeecCcc
Q psy5413 237 HNIPVHMDGARL-PLAE----VCASVDTVMFCLS--KGLGAPVGSILAGPEE 281 (285)
Q Consensus 237 ~gi~li~Dea~~-~~~~----~~~~~dv~~~s~s--K~l~~p~gg~~~~~~~ 281 (285)
||++||+|++|+ +... .....|+.+.|+| |++++++||+++.+++
T Consensus 152 ~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~ 203 (388)
T 1b9h_A 152 TGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG 203 (388)
T ss_dssp HTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred cCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH
Confidence 999999999998 2211 1122257777766 8887778888887664
No 133
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.86 E-value=4e-21 Score=175.90 Aligned_cols=196 Identities=13% Similarity=0.059 Sum_probs=144.0
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhccc------CCCCccCChhHHHHHHHHHhHc----C--CCcEEEcCChHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEV------GDDVYLEDPTCKELQEKAAKLA----G--KEAAIFVPSGTMGNLI 131 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~------~~~~y~~~~~~~~l~~~la~~~----g--~~~~~~~~~Gs~a~~~ 131 (285)
++++++|.++.+.. .+|.+.+++.++.. +...|+..+...+|++.+++++ + .+.+++++|+++++..
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~ 147 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIAR 147 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHH
Confidence 56889999887665 67799999887654 2235665566889999999997 3 3457899999999988
Q ss_pred HHHHccccCCCeEEecCCcceeeeccccccccccccccccee----------eeeeecCCC--CCCCHHHHHHHhccccc
Q psy5413 132 AIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVL----------MRGVTNQKD--GTFDLDEMEAKFSTADN 199 (285)
Q Consensus 132 al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~--~~~d~~~l~~~i~~~~~ 199 (285)
+ ..++ ++||.|++++++|......... .|.+ ++.++.+++ ...|++++ +
T Consensus 148 ~-~~l~-~~gd~Vl~~~p~~~~~~~~~~~---------~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--- 208 (449)
T 3qgu_A 148 I-QMMF-GSKPTVAVQDPSYPVYVDTSVM---------MGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----K--- 208 (449)
T ss_dssp H-HHHH-CSSSCEEEEESCCTHHHHHHHH---------HTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----C---
T ss_pred H-HHHh-CCCCEEEEcCCCChhHHHHHHH---------cCCcccccccccceeEEEecccccCCcCChhHc-----C---
Confidence 8 6656 5899999988877554332222 2444 666665433 22333221 2
Q ss_pred ccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc-----ccCCeEEEecccc
Q psy5413 200 IHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC-----ASVDTVMFCLSKG 267 (285)
Q Consensus 200 ~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~-----~~~dv~~~s~sK~ 267 (285)
++++|++++|+||+ |.+++.+++++|+++|++||+++|+||+|..+. .+. ...++++.|+||+
T Consensus 209 ----~~~~v~l~~p~NPt-G~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 283 (449)
T 3qgu_A 209 ----RTDIIFFCSPNNPT-GAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKY 283 (449)
T ss_dssp ----CCSEEEEESSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGG
T ss_pred ----CCCEEEEeCCCCCC-CCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhh
Confidence 68999999999999 899999999999999999999999999988211 111 2334669999999
Q ss_pred cCc--ceeEEeecCccccc
Q psy5413 268 LGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 268 l~~--p~gg~~~~~~~~i~ 284 (285)
++. .+.|++++++++++
T Consensus 284 ~g~~G~r~G~~~~~~~~~~ 302 (449)
T 3qgu_A 284 AGFTGVRLGWTVVPKALKY 302 (449)
T ss_dssp GTCTTCCCEEEECCTTCBC
T ss_pred cCCccceeEEEecCHHHHh
Confidence 973 56678888887764
No 134
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.86 E-value=3e-21 Score=173.53 Aligned_cols=199 Identities=14% Similarity=0.072 Sum_probs=145.8
Q ss_pred CeeeeeccCCc------CCCcHHHHHHHHhccc--CCCCccCChhHHHHHHHHHhHc-CC----CcEEE--cCChHHHHH
Q psy5413 66 IRTVDIRSDTI------SKPTMEMKNYMFNCEV--GDDVYLEDPTCKELQEKAAKLA-GK----EAAIF--VPSGTMGNL 130 (285)
Q Consensus 66 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~--~~~~y~~~~~~~~l~~~la~~~-g~----~~~~~--~~~Gs~a~~ 130 (285)
+.+++|..+.+ ..+++.+.+++.++.. ....|.......++++.+++++ +. +.+++ ++||++|++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~ 105 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALR 105 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHH
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHH
Confidence 45688887764 1357899999887643 2345665566789999999996 43 45677 999999999
Q ss_pred HHHHHccc-cCCCeEEecCCcceeeecccccccccccccccceeeeeeecC--CCCCCCHHHHHHHhcccccccCCceEE
Q psy5413 131 IAIMTHCD-RRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ--KDGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 131 ~al~~~~~-~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
.+++++.. .+|++|++..++|....... ...|.+++.++.. +++.+|++++++++++. ..++++
T Consensus 106 ~~~~~~~~~~~gd~vl~~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~~~ 172 (394)
T 2ay1_A 106 QALELARMANPDLRVFVSDPTWPNHVSIM---------NFMGLPVQTYRYFDAETRGVDFEGMKADLAAA----KKGDMV 172 (394)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCHHHHHHH---------HHHTCCEEEEECEETTTTEECHHHHHHHHHTC----CTTCEE
T ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHH---------HHcCCceEEEecccccCCccCHHHHHHHHHhC----CCCCEE
Confidence 99987652 37888998877665443211 2347777777763 45668999999999762 224788
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh--------h---hcc-cCCe-EEEecccccCc--ce
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA--------E---VCA-SVDT-VMFCLSKGLGA--PV 272 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~--------~---~~~-~~dv-~~~s~sK~l~~--p~ 272 (285)
+++++|+||| |.+++.+++++|+++|++||+++|+||+|..+. . +.. +.++ ++.|+||+++. .+
T Consensus 173 ~~~~~~~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 251 (394)
T 2ay1_A 173 LLHGCCHNPT-GANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRER 251 (394)
T ss_dssp EEESSSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGC
T ss_pred EEeCCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCc
Confidence 8889999999 899999999999999999999999999988321 1 112 3344 48999999973 44
Q ss_pred eEEeec
Q psy5413 273 GSILAG 278 (285)
Q Consensus 273 gg~~~~ 278 (285)
.|+++.
T Consensus 252 iG~~~~ 257 (394)
T 2ay1_A 252 TGCLLA 257 (394)
T ss_dssp EEEEEE
T ss_pred cceEEE
Confidence 455554
No 135
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.86 E-value=7.8e-21 Score=172.96 Aligned_cols=203 Identities=18% Similarity=0.110 Sum_probs=137.6
Q ss_pred eeeeccCCcCCCcHHHHHHHHhcccCCC-----Ccc----CChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHc
Q psy5413 68 TVDIRSDTISKPTMEMKNYMFNCEVGDD-----VYL----EDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 68 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~-----~y~----~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~ 136 (285)
.++|.......+++++++++.+...... .|. ..+...++++.+++++|.+ .+++++||++|+..+++++
T Consensus 19 ~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~ 98 (432)
T 3a9z_A 19 KVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHST 98 (432)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHH
T ss_pred cEEeeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHH
Confidence 3555555545778999999987654211 121 1123579999999999875 5799999999999999987
Q ss_pred cc-------cCCCeEEecCCcceeeeccc-----cccc-c--cccccccceeeeeeecCC-CCCCCHHHHHHHhcccccc
Q psy5413 137 CD-------RRDSEIIVGDCSHIMLWEQG-----GASQ-T--SVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNI 200 (285)
Q Consensus 137 ~~-------~~g~~vi~~~~~h~~~~~~~-----~~~~-~--~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~ 200 (285)
+. ++|++|++..+++....... -.+. . ..+....|.+++.++.++ ++.+|+++|++++++
T Consensus 99 ~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~---- 174 (432)
T 3a9z_A 99 VRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRP---- 174 (432)
T ss_dssp HHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCT----
T ss_pred HhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccC----
Confidence 52 37887777655542211000 0000 0 000123478888888754 667899999999987
Q ss_pred cCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcC----------CeEEEeCccCCh----hhhcccCCeEEEeccc
Q psy5413 201 HCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHN----------IPVHMDGARLPL----AEVCASVDTVMFCLSK 266 (285)
Q Consensus 201 ~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~g----------i~li~Dea~~~~----~~~~~~~dv~~~s~sK 266 (285)
++++|++++++|++ |.++| +++|.++|+++| +++|+||+|+.. .....+.|+++.|+||
T Consensus 175 ---~~~~v~~~~~~npt-G~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s~~K 247 (432)
T 3a9z_A 175 ---TTCLVTIMLANNET-GVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHK 247 (432)
T ss_dssp ---TEEEEECCSBCTTT-CBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEEGGG
T ss_pred ---CceEEEEECcccCc-ccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEehhH
Confidence 79999999999999 99999 889999999999 999999998721 1112368999999999
Q ss_pred ccCcceeEEeecCccc
Q psy5413 267 GLGAPVGSILAGPEEF 282 (285)
Q Consensus 267 ~l~~p~gg~~~~~~~~ 282 (285)
++| |+.|+++.++++
T Consensus 248 ~~g-~~~G~~~~~~~~ 262 (432)
T 3a9z_A 248 FYG-PRIGALYVRGVG 262 (432)
T ss_dssp TTC-CSCEEEEETTBT
T ss_pred hcC-CcceEEEEcccc
Confidence 986 557788776654
No 136
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.86 E-value=1.7e-21 Score=182.39 Aligned_cols=197 Identities=13% Similarity=0.070 Sum_probs=149.6
Q ss_pred eeeeeccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHc----CC-------CcEEEcCChHHHHHHHHHH
Q psy5413 67 RTVDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLA----GK-------EAAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 67 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~----g~-------~~~~~~~~Gs~a~~~al~~ 135 (285)
.+++|..+.+..++|++++++.+...+...+.+.....++++.+++++ +. +.+++++||++|+..++.+
T Consensus 104 ~~i~l~~g~~~~~~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~ 183 (533)
T 3f6t_A 104 DAVNYCHTELGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHS 183 (533)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred hheeccCCCCCcCCcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence 467888888888888888887776655433335556678888888876 32 4568999999999999987
Q ss_pred -----ccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC----CCCCCCHHHHHHHhcccccccCCceE
Q psy5413 136 -----HCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ----KDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 136 -----~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
++ ++||+|+++.++|......... .|..++.++.. .++.+|+++|++++++ +++
T Consensus 184 l~~~~l~-~~gd~Viv~~p~~~~~~~~~~~---------~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-------~~k 246 (533)
T 3f6t_A 184 LAENHLL-KKGDKIAINEPIFTPYLRIPEL---------KDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-------SIK 246 (533)
T ss_dssp HHHTTSS-CTTCEEEEESSCCHHHHTSGGG---------GGSEEEEECCCEETTTTSEECHHHHHHHSCT-------TEE
T ss_pred hhhhhcc-CCcCEEEEcCCCcHHHHHHHHH---------cCCeEEEEEecCCcccCCCCCHHHHHHHhCC-------CCe
Confidence 45 6899999999888665442222 36666666653 3467899999999977 899
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHH-HcCCeEEEeCccCCh-------hhhcccCCeEEEecccccCc--ceeEEe
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQ-EHNIPVHMDGARLPL-------AEVCASVDTVMFCLSKGLGA--PVGSIL 276 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~-~~gi~li~Dea~~~~-------~~~~~~~dv~~~s~sK~l~~--p~gg~~ 276 (285)
+|++++|+||+ |.+++.+++++|+++|+ +||+++|+||+|..+ .....+.++++.|+||.+|. .+.|++
T Consensus 247 ~v~l~~p~NPt-G~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l 325 (533)
T 3f6t_A 247 ALIVVNPTNPT-SKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVI 325 (533)
T ss_dssp EEEEESSCTTT-CBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEE
T ss_pred EEEEeCCCCCC-ccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEE
Confidence 99999999999 89999999999999999 689999999998722 12222334669999999874 455677
Q ss_pred ecCcc
Q psy5413 277 AGPEE 281 (285)
Q Consensus 277 ~~~~~ 281 (285)
+.+++
T Consensus 326 ~~~~~ 330 (533)
T 3f6t_A 326 ALNEK 330 (533)
T ss_dssp EEESS
T ss_pred EECcH
Confidence 76655
No 137
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.85 E-value=1.3e-21 Score=176.67 Aligned_cols=192 Identities=17% Similarity=0.168 Sum_probs=148.6
Q ss_pred CeeeeeccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc-cccCCCeE
Q psy5413 66 IRTVDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH-CDRRDSEI 144 (285)
Q Consensus 66 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~-~~~~g~~v 144 (285)
+.++||..+.+..+ +++.+++.++... ..|...+...++++.+++++|.+..+++++|++|+..+++++ + ++|++|
T Consensus 30 ~~~id~~~~~~~~~-~~v~~a~~~~~~~-~~y~~~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~-~~gd~v 106 (399)
T 2oga_A 30 VPFLDLKAAYEELR-AETDAAIARVLDS-GRYLLGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGI-GPGDEV 106 (399)
T ss_dssp BCSCCHHHHHHHTH-HHHHHHHHHHHHH-TCCSSSHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTC-CTTCEE
T ss_pred CcccccCcCCCCCC-HHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCC-CCcCEE
Confidence 45678877665544 8899998876643 256666889999999999999988899999999999999998 5 589999
Q ss_pred EecCCcceeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCC
Q psy5413 145 IVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLP 223 (285)
Q Consensus 145 i~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~ 223 (285)
+++.+.|..+.... ...|.+++.++.++ ++.+|+++|++++++ ++++|++ +|++ |.+.+
T Consensus 107 l~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~v~~---~n~t-G~~~~ 166 (399)
T 2oga_A 107 IVPSHTYIASWLAV---------SATGATPVPVEPHEDHPTLDPLLVEKAITP-------RTRALLP---VHLY-GHPAD 166 (399)
T ss_dssp EEESSSCTHHHHHH---------HHTTCEEEEECBCSSSSSBCHHHHHHHCCT-------TEEEECC---BCGG-GCCCC
T ss_pred EECCCccHHHHHHH---------HHCCCEEEEEecCCCCCCcCHHHHHHhcCC-------CCeEEEE---eCCc-CCccC
Confidence 99888776544322 23478888888755 467899999999987 7888885 4556 88888
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccCCh-h-h---hcccCCeEEEec--ccccCcc-eeEEeecC-cccc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARLPL-A-E---VCASVDTVMFCL--SKGLGAP-VGSILAGP-EEFI 283 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~~~-~-~---~~~~~dv~~~s~--sK~l~~p-~gg~~~~~-~~~i 283 (285)
+++|.++|+++|+++|+||+|+.. . . .....|++++|+ +|+++++ .||+++.+ ++++
T Consensus 167 ---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~ 232 (399)
T 2oga_A 167 ---MDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELA 232 (399)
T ss_dssp ---HHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHH
T ss_pred ---HHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHH
Confidence 999999999999999999999822 1 1 112258889998 6999873 67777664 6654
No 138
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.85 E-value=3.2e-21 Score=171.52 Aligned_cols=195 Identities=13% Similarity=0.061 Sum_probs=143.7
Q ss_pred cCCeeeeeccCCcCC-CcHHHHHHHHhcccC----CCCccCChhHHHHHHHHHhHcCC--CcEEEcCChHHHHHHHHHHc
Q psy5413 64 VNIRTVDIRSDTISK-PTMEMKNYMFNCEVG----DDVYLEDPTCKELQEKAAKLAGK--EAAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 64 ~~~~~~~~~~~~~~~-~~~~v~~a~~~~~~~----~~~y~~~~~~~~l~~~la~~~g~--~~~~~~~~Gs~a~~~al~~~ 136 (285)
.++.+++|.++.+.. ++|++.+++.+.... ...|. ++...++++.+++++|. +.+++++||++|+..+++++
T Consensus 24 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l 102 (360)
T 3hdo_A 24 DIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYP-SASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAF 102 (360)
T ss_dssp CCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHH
T ss_pred cccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCC-CCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHH
Confidence 356789999765554 678999999887654 23444 34468999999999984 46799999999999999998
Q ss_pred cccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCC
Q psy5413 137 CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNY 216 (285)
Q Consensus 137 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~ 216 (285)
+ ++||+|+++.++|....... ...|.+++.++.++++.+ +++++.+ ++++|++++|+||
T Consensus 103 ~-~~gd~Vl~~~p~~~~~~~~~---------~~~g~~~~~v~~~~~~~~--~~l~~~~---------~~~~v~i~~p~np 161 (360)
T 3hdo_A 103 A-AEGEEIGYVHPSYSYYGTLA---------EVQGARVRTFGLTGDFRI--AGFPERY---------EGKVFFLTTPNAP 161 (360)
T ss_dssp C-CTTCEEEEESSSCTHHHHHH---------HHHTCEEEEECBCTTSSB--TTCCSSB---------CSSEEEEESSCTT
T ss_pred h-CCCCEEEEcCCChHHHHHHH---------HHCCCEEEEeeCCCCCCH--HHHHhhc---------CCCEEEEeCCCCC
Confidence 6 68999999888775543322 234888888887555433 3332221 3569999999999
Q ss_pred CCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh-----hhhcc--cCCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 217 CGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL-----AEVCA--SVDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 217 ~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~-----~~~~~--~~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
+ |.++| ++++.++|+++|+++|+||+|+.+ ..... ..++++.|+||+++. .+.|+++.++++++
T Consensus 162 t-G~~~~---~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 234 (360)
T 3hdo_A 162 L-GPSFP---LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIA 234 (360)
T ss_dssp T-CCCCC---HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHH
T ss_pred C-CCCcC---HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHH
Confidence 9 99999 788888899999999999998832 22212 223558999999863 56678888877654
No 139
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.85 E-value=5.8e-21 Score=171.66 Aligned_cols=199 Identities=16% Similarity=0.054 Sum_probs=145.2
Q ss_pred CeeeeeccCCc---C---CCcHHHHHHHHhccc--CCCCccCChhHHHHHHHHHhHc---C-----CCcEEE--cCChHH
Q psy5413 66 IRTVDIRSDTI---S---KPTMEMKNYMFNCEV--GDDVYLEDPTCKELQEKAAKLA---G-----KEAAIF--VPSGTM 127 (285)
Q Consensus 66 ~~~~~~~~~~~---~---~~~~~v~~a~~~~~~--~~~~y~~~~~~~~l~~~la~~~---g-----~~~~~~--~~~Gs~ 127 (285)
+.+++|..+.+ . .+++.+.+++.++.. ....|+..+...++++.+++++ + .+.+++ ++||++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~ 105 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG 105 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchh
Confidence 46788888763 2 356899999887643 2345766667899999999997 2 345666 999999
Q ss_pred HHHHHHHHcc-ccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC--CCCCCCHHHHHHHhcccccccCCc
Q psy5413 128 GNLIAIMTHC-DRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ--KDGTFDLDEMEAKFSTADNIHCAS 204 (285)
Q Consensus 128 a~~~al~~~~-~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~ 204 (285)
|++.+++++. ..+|++|++..++|...... . ...|.+++.++.. +++.+|++++++++++. ..+
T Consensus 106 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~---~------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~ 172 (396)
T 2q7w_A 106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSV---F------NSAGLEVREYAYYDAENHTLDFDALINSLNEA----QAG 172 (396)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEESCCTHHHHH---H------HHTTCEEEEEECEETTTTEECHHHHHHHHTTC----CTT
T ss_pred hHHHHHHHHHHhCCCCEEEEcCCCchhHHHH---H------HHcCCceEEEecccCCCCCcCHHHHHHHHHhC----CCC
Confidence 9999998764 14899999887766543321 1 2347788888763 45668999999999752 225
Q ss_pred eEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh--------hh---cc-cCC-eEEEecccccCc-
Q psy5413 205 TSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA--------EV---CA-SVD-TVMFCLSKGLGA- 270 (285)
Q Consensus 205 ~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~--------~~---~~-~~d-v~~~s~sK~l~~- 270 (285)
++++++++|+||| |.+++.+++++|+++|++||+++|+||+|..+. .+ .. .-+ +++.|+||+++.
T Consensus 173 ~~~v~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 251 (396)
T 2q7w_A 173 DVVLFHGCCHNPT-GIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLY 251 (396)
T ss_dssp CEEEEECSSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCG
T ss_pred CEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccccc
Confidence 7889999999999 899999999999999999999999999987321 11 11 223 459999999973
Q ss_pred -ceeEEeec
Q psy5413 271 -PVGSILAG 278 (285)
Q Consensus 271 -p~gg~~~~ 278 (285)
.+.|+++.
T Consensus 252 G~riG~~~~ 260 (396)
T 2q7w_A 252 NERVGACTL 260 (396)
T ss_dssp GGCCEEEEE
T ss_pred ccccceEEE
Confidence 44455653
No 140
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.85 E-value=1.5e-21 Score=177.83 Aligned_cols=204 Identities=12% Similarity=0.016 Sum_probs=151.9
Q ss_pred CeeeeeccCCc-CC-CcHHH--HHHHHhcccC--CCCccCChhHHHHHHHHHhHc-----CC--Cc---EEEcCChHHHH
Q psy5413 66 IRTVDIRSDTI-SK-PTMEM--KNYMFNCEVG--DDVYLEDPTCKELQEKAAKLA-----GK--EA---AIFVPSGTMGN 129 (285)
Q Consensus 66 ~~~~~~~~~~~-~~-~~~~v--~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~-----g~--~~---~~~~~~Gs~a~ 129 (285)
+.++||..+.+ .. .+|.+ .+++.++... ...|.......++++.+++++ +. +. +++++||++|+
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al 126 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGL 126 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHH
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHH
Confidence 35789998877 44 34556 7777665432 345665456889999999998 54 46 78999999999
Q ss_pred HHHHHHccccCCCeEEecCCcceeeecccccccccccccc-cceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEE
Q psy5413 130 LIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQI-GRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 130 ~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
..++++++ ++||+|+++.++|...... . .. .|.+++.++.++ ++.+|+++|++++++ ++.++++
T Consensus 127 ~~~~~~l~-~~gd~Vl~~~p~y~~~~~~---~------~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~~~~ 192 (430)
T 2x5f_A 127 SLVGDLFV-NQDDTILLPEHNWGNYKLV---F------NTRNGANLQTYPIFDKDGHYTTDSLVEALQS----YNKDKVI 192 (430)
T ss_dssp HHHHHHHC-CTTCEEEEESSCCTHHHHH---H------TTTTCCEEEEECCBCTTSCBCSHHHHHHHHH----CCSSEEE
T ss_pred HHHHHHHh-CCCCEEEEcCCcCccHHHH---H------HHhcCCeEEEEeccCccCCcCHHHHHHHHHh----cCCCCEE
Confidence 99999987 6899999988776544331 1 23 478888888644 356899999999976 2336899
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHH-----cCCeEEEeCccCCh----------h-hhcc-cC----CeEEEeccc
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQE-----HNIPVHMDGARLPL----------A-EVCA-SV----DTVMFCLSK 266 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~-----~gi~li~Dea~~~~----------~-~~~~-~~----dv~~~s~sK 266 (285)
|++++|+||| |.+++.+++++|+++|++ ||+++|+||+|..+ . .+.. .. ++++.|+||
T Consensus 193 v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 271 (430)
T 2x5f_A 193 MILNYPNNPT-GYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATK 271 (430)
T ss_dssp EEECSSCTTT-CCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHH
T ss_pred EEEcCCCCCC-CCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEeccc
Confidence 9999999999 899999999999999999 99999999998721 1 2211 22 344899999
Q ss_pred ccCc--ceeEEeec---Cccccc
Q psy5413 267 GLGA--PVGSILAG---PEEFIQ 284 (285)
Q Consensus 267 ~l~~--p~gg~~~~---~~~~i~ 284 (285)
++++ .+.|+++. ++++++
T Consensus 272 ~~~~~G~riG~~~~~~~~~~~~~ 294 (430)
T 2x5f_A 272 EFFAWGFRVGFMTFGTSDQTTKE 294 (430)
T ss_dssp HTTCGGGCCEEEEEBCCCHHHHH
T ss_pred CCCCCCCCeEEEEEecCCHHHHH
Confidence 9974 44567766 766653
No 141
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.85 E-value=3.6e-21 Score=172.84 Aligned_cols=188 Identities=19% Similarity=0.162 Sum_probs=146.4
Q ss_pred eeeeccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc-cccCCCeEEe
Q psy5413 68 TVDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH-CDRRDSEIIV 146 (285)
Q Consensus 68 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~-~~~~g~~vi~ 146 (285)
+++|.. +. .++++.+++.+..... .|...+...++++.+++++|.+.+++++||++|+..+++++ + ++|++|++
T Consensus 10 ~i~~~~--p~-~~~~~~~a~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~-~~gd~Vl~ 84 (393)
T 1mdo_A 10 FLPFSR--PA-MGAEELAAVKTVLDSG-WITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGI-GEGDEVIT 84 (393)
T ss_dssp CBCSCC--CC-CCHHHHHHHHHHHHHT-CCSSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTC-CTTCEEEE
T ss_pred ccccCC--CC-CCHHHHHHHHHHHhcC-CcCCChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCC-CCCCEEEe
Confidence 355554 23 3477788887766432 34456889999999999999998999999999999999998 6 58999999
Q ss_pred cCCcceeeecccccccccccccccceeeeeeecCCC-CCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHH
Q psy5413 147 GDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKD-GTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQ 225 (285)
Q Consensus 147 ~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~ 225 (285)
+.+.|....... ...|.+++.++.+++ +.+|+++|++++++ ++++|+++++ + |.+.+
T Consensus 85 ~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~~---~-G~~~~-- 142 (393)
T 1mdo_A 85 PSMTWVSTLNMI---------VLLGANPVMVDVDRDTLMVTPEHIEAAITP-------QTKAIIPVHY---A-GAPAD-- 142 (393)
T ss_dssp ESSSCHHHHHHH---------HHTTCEEEEECBCTTTCCBCHHHHHHHCCT-------TEEEECCBCG---G-GCCCC--
T ss_pred CCCccHhHHHHH---------HHCCCEEEEEeccCCcCCCCHHHHHHhcCC-------CceEEEEeCC---C-CCcCC--
Confidence 888876554322 234888888887554 57899999999987 7899998764 4 78888
Q ss_pred HHHHHHHHHHHcCCeEEEeCccC-Chhhh--ccc-CCeEEEecc--cccCcceeEEeecC-cccc
Q psy5413 226 WLRELKARCQEHNIPVHMDGARL-PLAEV--CAS-VDTVMFCLS--KGLGAPVGSILAGP-EEFI 283 (285)
Q Consensus 226 ~l~~i~~la~~~gi~li~Dea~~-~~~~~--~~~-~dv~~~s~s--K~l~~p~gg~~~~~-~~~i 283 (285)
+++|.++|++||+++|+||+|+ +.... ..+ .|+++.|+| |+++++++|+++.+ ++++
T Consensus 143 -~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~ 206 (393)
T 1mdo_A 143 -LDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFA 206 (393)
T ss_dssp -HHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHH
T ss_pred -HHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHH
Confidence 9999999999999999999998 32211 113 788999999 99988788888875 5654
No 142
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.85 E-value=2.2e-20 Score=170.05 Aligned_cols=157 Identities=18% Similarity=0.177 Sum_probs=129.2
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccc-ccccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQG-GASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~~~~~~~g~~~~~~ 177 (285)
.++...++++.+++++|.+..+++++|++|+..++++++ ++|++|+++...|..+.... .+. ...|.+++.+
T Consensus 56 ~~~~~~~l~~~la~~~g~~~~v~~~sGt~A~~~~l~~~~-~~gd~vi~~~~~~~~~~~~~~~~~------~~~g~~~~~~ 128 (421)
T 2ctz_A 56 MNPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLA-QAGDNIVSTPNLYGGTFNQFKVTL------KRLGIEVRFT 128 (421)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEECSCCCHHHHHHHHTHH------HHTTCEEEEC
T ss_pred CChHHHHHHHHHHHHhCCCceEEecCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHH------HHcCCEEEEE
Confidence 467789999999999999888999999999999999876 68999999887775543211 111 2457788877
Q ss_pred -ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCcc-C-Ch--hh
Q psy5413 178 -TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGAR-L-PL--AE 252 (285)
Q Consensus 178 -~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~-~-~~--~~ 252 (285)
+.. |+++++++|++ ++++|++++++|++ |.+.| +++|+++|++||+++|+|++| + +. ..
T Consensus 129 ~~~~-----d~~~l~~~i~~-------~~~~v~~~~~~n~~-G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~~~~ 192 (421)
T 2ctz_A 129 SREE-----RPEEFLALTDE-------KTRAWWVESIGNPA-LNIPD---LEALAQAAREKGVALIVDNTFGMGGYLLRP 192 (421)
T ss_dssp CTTC-----CHHHHHHHCCT-------TEEEEEEESSCTTT-CCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSCCG
T ss_pred CCCC-----CHHHHHHhhcc-------CCeEEEEECCCCCC-CcccC---HHHHHHHHHHcCCEEEEECCcccccccCCc
Confidence 552 89999999987 89999999999999 89999 999999999999999999999 5 21 22
Q ss_pred hcccCCeEEEecccccCc---ceeEEeec
Q psy5413 253 VCASVDTVMFCLSKGLGA---PVGSILAG 278 (285)
Q Consensus 253 ~~~~~dv~~~s~sK~l~~---p~gg~~~~ 278 (285)
...++|+++.|++|++++ +.||+++.
T Consensus 193 ~~~~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 193 LAWGAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp GGGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred cccCCeEEEECCcccccCCCCcEEEEEEe
Confidence 335689999999999997 56888876
No 143
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.85 E-value=4.9e-21 Score=170.31 Aligned_cols=191 Identities=19% Similarity=0.156 Sum_probs=143.2
Q ss_pred eeeeeccCCcCC-CcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccccCC-C
Q psy5413 67 RTVDIRSDTISK-PTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCDRRD-S 142 (285)
Q Consensus 67 ~~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~~~g-~ 142 (285)
.++||.++.... ++|.+ + ......|... ...++++.++++++.+ .+++++||++++..++++++ ++| +
T Consensus 30 ~~i~l~~~~~~~~~~~~v--a----~~~~~~Y~~~-~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~-~~g~d 101 (356)
T 1fg7_A 30 GDVWLNANEYPTAVEFQL--T----QQTLNRYPEC-QPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFC-EPGKD 101 (356)
T ss_dssp CSEECSSCCCSSCCCCCC--C----CCCTTSCCCS-SCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC-CTTTC
T ss_pred ceEEeeCCCCCCCCCHhH--h----hhhhccCCCc-cHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHh-CCCCC
Confidence 568888654443 44455 2 2233456543 4789999999999865 57899999999999999987 588 8
Q ss_pred eEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeC
Q psy5413 143 EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVL 222 (285)
Q Consensus 143 ~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~ 222 (285)
+|+++.++|....... ...|.+++.++.++++.+|+++++++++ ++++|++++|+||| |.++
T Consensus 102 ~Vl~~~p~~~~~~~~~---------~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~v~l~~p~npt-G~~~ 163 (356)
T 1fg7_A 102 AILYCPPTYGMYSVSA---------ETIGVECRTVPTLDNWQLDLQGISDKLD--------GVKVVYVCSPNNPT-GQLI 163 (356)
T ss_dssp EEEECSSSCTHHHHHH---------HHHTCEEEECCCCTTSCCCHHHHHTSCT--------TEEEEEEESSCTTT-CCCC
T ss_pred EEEEeCCChHHHHHHH---------HHcCCEEEEeeCCCCCCCCHHHHHHHhc--------CCCEEEEeCCCCCC-CCCC
Confidence 9999887765443321 2347888888876666789999988874 47899999999999 8999
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccCChh------hhcc--cCCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARLPLA------EVCA--SVDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~~~~------~~~~--~~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
|.+++++|+++|+ +|+++|+||+|..+. .+.. ..++++.|+||+++. .+.|+++.++++++
T Consensus 164 ~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 234 (356)
T 1fg7_A 164 NPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVIN 234 (356)
T ss_dssp CHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHH
T ss_pred CHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHHHH
Confidence 9999999999999 999999999988322 1111 234569999999874 55677777777654
No 144
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.85 E-value=2.5e-21 Score=172.98 Aligned_cols=177 Identities=15% Similarity=0.086 Sum_probs=139.0
Q ss_pred cHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecccc
Q psy5413 80 TMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGG 159 (285)
Q Consensus 80 ~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~ 159 (285)
.+++.+++.+.... ..|...+...++++.+++++|.+.+++++||++|+..+++++..++||+|+++.+.|..+....
T Consensus 16 ~~~~~~a~~~~~~~-~~~~~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~- 93 (373)
T 3frk_A 16 EYEIKFKFEEIYKR-NWFILGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAV- 93 (373)
T ss_dssp HHHHHHHHHHHHHH-TCCSSSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHH-
T ss_pred CHHHHHHHHHHHHC-CCccCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH-
Confidence 56777777665543 2466678899999999999999999999999999999999982368999999988887654422
Q ss_pred cccccccccccceeeeeeecC-CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcC
Q psy5413 160 ASQTSVYSQIGRVLMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHN 238 (285)
Q Consensus 160 ~~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~g 238 (285)
...|.+++.++.+ +++.+|++++++++++ ++++|++ +|++ |.+.+ +++|.++|++||
T Consensus 94 --------~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~~---~n~~-G~~~~---l~~i~~l~~~~~ 151 (373)
T 3frk_A 94 --------SYTGAKPIFVEPDIRTYNIDPSLIESAITE-------KTKAIIA---VHLY-GQPAD---MDEIKRIAKKYN 151 (373)
T ss_dssp --------HHHSCEEEEECEETTTTEECGGGTGGGCCT-------TEEEEEE---ECCT-TCCCC---HHHHHHHHHHHT
T ss_pred --------HHcCCEEEEEeccccccCcCHHHHHHhcCC-------CCeEEEE---ECCC-cCccc---HHHHHHHHHHcC
Confidence 2347788888765 4567899999999987 7888884 4566 88888 999999999999
Q ss_pred CeEEEeCccCC-hh----hhcccCCeEEEecc--cccCc-ceeEEeecCc
Q psy5413 239 IPVHMDGARLP-LA----EVCASVDTVMFCLS--KGLGA-PVGSILAGPE 280 (285)
Q Consensus 239 i~li~Dea~~~-~~----~~~~~~dv~~~s~s--K~l~~-p~gg~~~~~~ 280 (285)
+++|+|++|+. .. ......|++++|++ |++++ +.||++++++
T Consensus 152 ~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~ 201 (373)
T 3frk_A 152 LKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTND 201 (373)
T ss_dssp CEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESC
T ss_pred CEEEEECCcccCCEECCEeccccccEEEEeCcCCCccCccceeEEEEeCC
Confidence 99999999882 21 11123688888866 99998 6788887754
No 145
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.85 E-value=1.3e-20 Score=168.15 Aligned_cols=195 Identities=13% Similarity=0.045 Sum_probs=144.3
Q ss_pred eeeccCCcC-CCcHHHHHHHHhcccC----CCCccCChhHHHHHHHHHhH------cCC--CcEEEcCChHHHHHHHHHH
Q psy5413 69 VDIRSDTIS-KPTMEMKNYMFNCEVG----DDVYLEDPTCKELQEKAAKL------AGK--EAAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 69 ~~~~~~~~~-~~~~~v~~a~~~~~~~----~~~y~~~~~~~~l~~~la~~------~g~--~~~~~~~~Gs~a~~~al~~ 135 (285)
+||.++.+. .++|++.+++.++... ...|.... ..++++.++++ ++. +.+++++||++++..++++
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~ 111 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPERD-AVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQA 111 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTT-CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCcc-HHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHH
Confidence 788876554 4678999998876542 34565433 36899999998 443 3468889899999999999
Q ss_pred ccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccC
Q psy5413 136 HCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHN 215 (285)
Q Consensus 136 ~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n 215 (285)
++ ++|++|+++.++|....... ...|.+++.++.++++.+|++++++++++. ++++|++++|+|
T Consensus 112 l~-~~gd~Vl~~~~~y~~~~~~~---------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~n 175 (369)
T 3cq5_A 112 FG-GPGRTALGFQPSYSMHPILA---------KGTHTEFIAVSRGADFRIDMDVALEEIRAK------QPDIVFVTTPNN 175 (369)
T ss_dssp HC-STTCEEEEEESSCTHHHHHH---------HHTTCEEEEEECCTTSSCCHHHHHHHHHHH------CCSEEEEESSCT
T ss_pred hc-CCCCEEEEcCCChHHHHHHH---------HHcCCEEEEecCCcCCCCCHHHHHHHhhcc------CCCEEEEeCCCC
Confidence 86 58999999887775443311 234788888887666678999999999752 578999999999
Q ss_pred CCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh------hhhccc---CCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 216 YCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL------AEVCAS---VDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 216 ~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~------~~~~~~---~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
|+ |.++| ++++.++|+.+++++|+||+|+.+ ...... .++++.|+||+++. .+.|+++.++++++
T Consensus 176 pt-G~~~~---~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 251 (369)
T 3cq5_A 176 PT-GDVTS---LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFID 251 (369)
T ss_dssp TT-CCCCC---HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHH
T ss_pred CC-CCCCC---HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHH
Confidence 99 89999 677777777788999999998722 122122 23669999999974 44577777776653
No 146
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.85 E-value=2.3e-20 Score=169.69 Aligned_cols=206 Identities=14% Similarity=0.086 Sum_probs=138.8
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccCCCCcc-CChhHHHHHHHHHhHc-CCCcEEEcCChHHHHHHHHHHc--
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVGDDVYL-EDPTCKELQEKAAKLA-GKEAAIFVPSGTMGNLIAIMTH-- 136 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~~~y~-~~~~~~~l~~~la~~~-g~~~~~~~~~Gs~a~~~al~~~-- 136 (285)
|++++||.++ ..++++|++.+++.+++.....|+ ..+...++++.+++++ +.+.+++++||++|++.+++++
T Consensus 51 g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~ 130 (424)
T 2e7u_A 51 GNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARG 130 (424)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHH
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 5678888765 335578999999988776422222 4567899999999999 6777899999999999999973
Q ss_pred cccCCCeEEe-cCCcceeeecccccccc--cccc--cccce------eeeeeecCCCCCCCHHHHHHHhcccccccCCce
Q psy5413 137 CDRRDSEIIV-GDCSHIMLWEQGGASQT--SVYS--QIGRV------LMRGVTNQKDGTFDLDEMEAKFSTADNIHCAST 205 (285)
Q Consensus 137 ~~~~g~~vi~-~~~~h~~~~~~~~~~~~--~~~~--~~~g~------~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 205 (285)
+. .++.|++ ...||..+......... ..+. ...|. .++.++. .|+++|++++++. ++++
T Consensus 131 ~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~----~~~~ 200 (424)
T 2e7u_A 131 YT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRR----GEEI 200 (424)
T ss_dssp HH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHH----GGGE
T ss_pred hh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhC----CCCE
Confidence 32 3355555 45667654322111100 0000 01121 2333332 3899999999741 1278
Q ss_pred EEEEEecccCCCCeee-CCHHHHHHHHHHHHHcCCeEEEeCccCChh----hhcc----cCCeEEEecccccCc-ceeEE
Q psy5413 206 SLVCVENTHNYCGGTV-LPMQWLRELKARCQEHNIPVHMDGARLPLA----EVCA----SVDTVMFCLSKGLGA-PVGSI 275 (285)
Q Consensus 206 ~~v~i~~~~n~~gG~~-~~~~~l~~i~~la~~~gi~li~Dea~~~~~----~~~~----~~dv~~~s~sK~l~~-p~gg~ 275 (285)
++|++++.++++ |.+ .+.+++++|+++ ++||++||+||+|+++. ...+ ..| +.|+||++++ ..+|+
T Consensus 201 ~~vi~ep~~~~~-G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d--i~s~sK~l~~G~~~G~ 276 (424)
T 2e7u_A 201 AAIIFEPVVGNA-GVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPD--LVTLGKILGGGLPAAA 276 (424)
T ss_dssp EEEEECSSBCTT-SCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCS--EEEECGGGGTTSSCEE
T ss_pred EEEEEeCCCCCC-CCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcc--hhhhhhhhhCCcceEE
Confidence 999998887777 655 579999999999 99999999999998542 1111 234 4588999987 34556
Q ss_pred eecCccccc
Q psy5413 276 LAGPEEFIQ 284 (285)
Q Consensus 276 ~~~~~~~i~ 284 (285)
+++++++++
T Consensus 277 ~~~~~~~~~ 285 (424)
T 2e7u_A 277 YAGRREIME 285 (424)
T ss_dssp EEECHHHHT
T ss_pred EEEcHHHHh
Confidence 666777665
No 147
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.85 E-value=7.7e-21 Score=171.93 Aligned_cols=203 Identities=14% Similarity=0.026 Sum_probs=148.4
Q ss_pred CCeeeeeccCCc------CCCcHHHHHHHHhcc--c-CCCCccCChhHHHHHHHHHhHc-CC-------CcEEE--cCCh
Q psy5413 65 NIRTVDIRSDTI------SKPTMEMKNYMFNCE--V-GDDVYLEDPTCKELQEKAAKLA-GK-------EAAIF--VPSG 125 (285)
Q Consensus 65 ~~~~~~~~~~~~------~~~~~~v~~a~~~~~--~-~~~~y~~~~~~~~l~~~la~~~-g~-------~~~~~--~~~G 125 (285)
++.+++|..+.+ ..+.+.+.+++.+.. . ....|+......++++.+++++ +. +.+++ ++||
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg 108 (412)
T 1ajs_A 29 DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGG 108 (412)
T ss_dssp CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHH
T ss_pred CCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCc
Confidence 456788888764 235689999988775 2 2345766667889999999998 43 56788 9999
Q ss_pred HHHHHHHHHHcc-ccCC-----CeEEecCCcceeeeccccccccccccccccee-eeeeecC--CCCCCCHHHHHHHhcc
Q psy5413 126 TMGNLIAIMTHC-DRRD-----SEIIVGDCSHIMLWEQGGASQTSVYSQIGRVL-MRGVTNQ--KDGTFDLDEMEAKFST 196 (285)
Q Consensus 126 s~a~~~al~~~~-~~~g-----~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~--~~~~~d~~~l~~~i~~ 196 (285)
++|++.+++++. ..+| ++|++..++|...... . ...|.+ ++.++.. +++.+|++++++++++
T Consensus 109 ~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~---~------~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 179 (412)
T 1ajs_A 109 TGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGV---F------TTAGFKDIRSYRYWDTEKRGLDLQGFLSDLEN 179 (412)
T ss_dssp HHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHH---H------HHTTCSCEEEEECEETTTTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHH---H------HHcCCceeEEEeeecCCCCccCHHHHHHHHHh
Confidence 999999975322 2478 8899887776543321 1 234777 7777762 4566899999999975
Q ss_pred cccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh---------hh---cccCC--eEEE
Q psy5413 197 ADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA---------EV---CASVD--TVMF 262 (285)
Q Consensus 197 ~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~---------~~---~~~~d--v~~~ 262 (285)
+..++++|++++|+||| |.+++.+++++|+++|++||+++|+||+|.++. .+ ....| +++.
T Consensus 180 ----~~~~~~~v~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 254 (412)
T 1ajs_A 180 ----APEFSIFVLHACAHNPT-GTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQ 254 (412)
T ss_dssp ----SCTTCEEEEESSSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEE
T ss_pred ----CCCCcEEEEECCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEE
Confidence 22367888899999999 889999999999999999999999999977321 11 12234 5599
Q ss_pred ecccccCc--ceeEEeec---Ccc
Q psy5413 263 CLSKGLGA--PVGSILAG---PEE 281 (285)
Q Consensus 263 s~sK~l~~--p~gg~~~~---~~~ 281 (285)
|+||.+++ .+.|+++. +++
T Consensus 255 s~sK~~~~~G~riG~~~~~~~~~~ 278 (412)
T 1ajs_A 255 SFSKNFGLYNERVGNLTVVAKEPD 278 (412)
T ss_dssp ECTTTSCCGGGCEEEEEEECSSHH
T ss_pred ecccccCCCCcceEEEEEecCCHH
Confidence 99999876 33456655 565
No 148
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.85 E-value=2.9e-21 Score=175.90 Aligned_cols=217 Identities=14% Similarity=0.068 Sum_probs=137.2
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccCCC----CccCChhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVGDD----VYLEDPTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~~----~y~~~~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~al~ 134 (285)
|++++||.++ ..++.+|++.+++.+++.... ....++...++++.++++++ .+.+++++||++|++.+++
T Consensus 28 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~ 107 (430)
T 3i4j_A 28 GRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVK 107 (430)
T ss_dssp SCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHH
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHH
Confidence 5677888763 334568999999987764321 23346678899999999985 4678999999999999999
Q ss_pred Hcccc------C-CCeEEec-CCcceeeeccccccccccccccc---ce--eeeeeecCCC---CCCCHHHHHHHhcccc
Q psy5413 135 THCDR------R-DSEIIVG-DCSHIMLWEQGGASQTSVYSQIG---RV--LMRGVTNQKD---GTFDLDEMEAKFSTAD 198 (285)
Q Consensus 135 ~~~~~------~-g~~vi~~-~~~h~~~~~~~~~~~~~~~~~~~---g~--~~~~~~~~~~---~~~d~~~l~~~i~~~~ 198 (285)
+++.. + ++.|++. ..+|.+............+...+ .. .+..++.+.. +..|+++|+++|++.
T Consensus 108 ~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~- 186 (430)
T 3i4j_A 108 LARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLERE- 186 (430)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHH-
T ss_pred HHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhc-
Confidence 98642 2 4566664 55566553322222011111111 11 2333343222 224678999998741
Q ss_pred cccCCceEEEEEecccC-CCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-----hhcccC-CeE--EEecccccC
Q psy5413 199 NIHCASTSLVCVENTHN-YCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-----EVCASV-DTV--MFCLSKGLG 269 (285)
Q Consensus 199 ~~~~~~~~~v~i~~~~n-~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-----~~~~~~-dv~--~~s~sK~l~ 269 (285)
+.+++++|++++++| ++|..+.+.+++++|+++|++||++||+||+|+++. ...... ++. +.++||+++
T Consensus 187 --~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~ 264 (430)
T 3i4j_A 187 --GPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLA 264 (430)
T ss_dssp --CGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGT
T ss_pred --CCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEccccc
Confidence 112789999999998 886678889999999999999999999999988432 122222 222 567889988
Q ss_pred c--ceeEEeecCccccc
Q psy5413 270 A--PVGSILAGPEEFIQ 284 (285)
Q Consensus 270 ~--p~gg~~~~~~~~i~ 284 (285)
+ .+.|+++.++++++
T Consensus 265 ~G~~r~G~~~~~~~i~~ 281 (430)
T 3i4j_A 265 AGYAPLAGLLAAPQVYE 281 (430)
T ss_dssp TTSSCCEEEEECHHHHH
T ss_pred CCccccEEEEECHHHHH
Confidence 5 23366777777653
No 149
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.85 E-value=1.1e-20 Score=171.92 Aligned_cols=188 Identities=16% Similarity=0.138 Sum_probs=145.8
Q ss_pred eeccCCcCCC-cHHHHHHHHhcccCCCCccC-ChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEec
Q psy5413 70 DIRSDTISKP-TMEMKNYMFNCEVGDDVYLE-DPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVG 147 (285)
Q Consensus 70 ~~~~~~~~~~-~~~v~~a~~~~~~~~~~y~~-~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~ 147 (285)
+|..+.+..+ ++++.+++.+.... ..|.. .+...++++.++++++.+.+++++||++|+..+++++. +|++|+++
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~-~~y~~~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~--~gd~Vlv~ 96 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDS-QWLSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG--LTGEVIMP 96 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHH-TCCSSSCHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT--CCSEEEEE
T ss_pred cccccCCCCCChHHHHHHHHHHHhc-CCcccCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC--CCCEEEEC
Confidence 3444444443 45888888776542 24665 68899999999999999999999999999999999864 68999998
Q ss_pred CCcceeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHH
Q psy5413 148 DCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQW 226 (285)
Q Consensus 148 ~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~ 226 (285)
+++|....... ...|.+++.++.++ ++.+|+++|++++++ ++++|+++++ + |.+.+
T Consensus 97 ~~~~~~~~~~~---------~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~~---t-G~~~~--- 153 (424)
T 2po3_A 97 SMTFAATPHAL---------RWIGLTPVFADIDPDTGNLDPDQVAAAVTP-------RTSAVVGVHL---W-GRPCA--- 153 (424)
T ss_dssp SSSCTHHHHHH---------HHTTCEEEEECBCTTTSSBCHHHHGGGCCT-------TEEEEEEECG---G-GCCCC---
T ss_pred CCccHHHHHHH---------HHcCCEEEEEecCCCcCCcCHHHHHHhhCc-------CCcEEEEECC---C-CCcCC---
Confidence 88876554322 23488888888754 567899999999976 7899998764 4 78777
Q ss_pred HHHHHHHHHHcCCeEEEeCccC-Chhh----hcccCCeEEEecc--cccCcceeEEeecC-cccc
Q psy5413 227 LRELKARCQEHNIPVHMDGARL-PLAE----VCASVDTVMFCLS--KGLGAPVGSILAGP-EEFI 283 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea~~-~~~~----~~~~~dv~~~s~s--K~l~~p~gg~~~~~-~~~i 283 (285)
+++|+++|++||+++|+||+|+ +... +....|+++.|+| |+++++++|+++.+ ++++
T Consensus 154 l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~ 218 (424)
T 2po3_A 154 ADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLA 218 (424)
T ss_dssp HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccCCCCeEEEeCCHHHH
Confidence 9999999999999999999988 3321 2223588899998 89988888888887 6654
No 150
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.85 E-value=4.1e-21 Score=174.51 Aligned_cols=196 Identities=13% Similarity=-0.003 Sum_probs=146.2
Q ss_pred CeeeeeccC---CcCC---CcHHHHHHHHhcccC--CCCccCChhHHHHHHHHHhHcCC--------C--cEEEcCChHH
Q psy5413 66 IRTVDIRSD---TISK---PTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKAAKLAGK--------E--AAIFVPSGTM 127 (285)
Q Consensus 66 ~~~~~~~~~---~~~~---~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g~--------~--~~~~~~~Gs~ 127 (285)
..+++|..+ ++.. +.+.+.+++.+.... ...|.......++++.+++++.. + .+++++||++
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~ 128 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTG 128 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHH
Confidence 467888887 3333 347999998876654 34576666778899999988632 3 5689999999
Q ss_pred HHHHHHH--HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeec--CCCCCCCHHHHHHHhcccccccCC
Q psy5413 128 GNLIAIM--THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN--QKDGTFDLDEMEAKFSTADNIHCA 203 (285)
Q Consensus 128 a~~~al~--~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~ 203 (285)
|+..+++ .++ .+||+|++++++|....... ...|.+++.++. .+++.+|++++++.+++ +.+
T Consensus 129 al~~~~~~~~~~-~~gd~Vlv~~p~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~ 194 (420)
T 4f4e_A 129 ALKIGADFLRTL-NPKAKVAISDPSWENHRALF---------DMAGFEVVAYPYYDAKTNGVNFDGMLAALNG----YEP 194 (420)
T ss_dssp HHHHHHHHHHHH-CTTCCEEEEESCCHHHHHHH---------HHTTCCEEEEECEETTTTEECHHHHHHHHTT----CCT
T ss_pred HHHHHHHHHHHh-CCCCEEEEeCCCcHhHHHHH---------HHcCCeEEEeeeeccccCccCHHHHHHHHHh----CCC
Confidence 9999964 334 58999999888875543322 234778888876 34667899999999985 223
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh--------h---hc--ccCCeEEEecccccCc
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA--------E---VC--ASVDTVMFCLSKGLGA 270 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~--------~---~~--~~~dv~~~s~sK~l~~ 270 (285)
++++|++++|+||| |.+++.+++++|+++|++||+++|+||+|..+. . .. ....+++.|+||.++.
T Consensus 195 ~~~~v~i~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 273 (420)
T 4f4e_A 195 GTIVVLHACCHNPT-GVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSL 273 (420)
T ss_dssp TCEEEEECSSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTC
T ss_pred CCEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcC
Confidence 78999999999999 899999999999999999999999999987221 1 11 1223558999999984
Q ss_pred --ceeEEe
Q psy5413 271 --PVGSIL 276 (285)
Q Consensus 271 --p~gg~~ 276 (285)
.+.|++
T Consensus 274 ~G~RiG~~ 281 (420)
T 4f4e_A 274 YGERVGAL 281 (420)
T ss_dssp GGGCEEEE
T ss_pred cCCCcEEE
Confidence 444554
No 151
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.85 E-value=1.9e-20 Score=169.28 Aligned_cols=188 Identities=18% Similarity=0.106 Sum_probs=131.8
Q ss_pred CcHHHHHHHHhcccCC--------CCccCChhHHHH----HHHHHhHcCCCcE-EEcCChHHHHHHHHHHccccCCCeEE
Q psy5413 79 PTMEMKNYMFNCEVGD--------DVYLEDPTCKEL----QEKAAKLAGKEAA-IFVPSGTMGNLIAIMTHCDRRDSEII 145 (285)
Q Consensus 79 ~~~~v~~a~~~~~~~~--------~~y~~~~~~~~l----~~~la~~~g~~~~-~~~~~Gs~a~~~al~~~~~~~g~~vi 145 (285)
.+|++.+++.++.... ..|...+...++ ++.+++++|.+.. +++++|++|++.++++++ ++||+|+
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~-~~gd~vl 115 (417)
T 3n0l_A 37 TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYAALI-NPGDKIL 115 (417)
T ss_dssp CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHS-CTTCEEE
T ss_pred CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhc-CCCCEEE
Confidence 4899999998876321 122233334444 4488888998876 888999999999999986 6999999
Q ss_pred ecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHH
Q psy5413 146 VGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQ 225 (285)
Q Consensus 146 ~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~ 225 (285)
+..+.|......+... .. ...+..++.++.+.++.+|+++|++++++. ++++|++++++| |.+.+
T Consensus 116 ~~~~~~~~~~~~~~~~---~~-~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~~---G~~~~-- 180 (417)
T 3n0l_A 116 GMDLSHGGHLTHGAKV---SS-SGKMYESCFYGVELDGRIDYEKVREIAKKE------KPKLIVCGASAY---ARVID-- 180 (417)
T ss_dssp EECC--------------------CCSEEEEECCCTTSSCCHHHHHHHHHHH------CCSEEEECCSSC---CSCCC--
T ss_pred ecccccccccchhhhh---hh-hcceeeeEeccCCCCCCcCHHHHHHHHHhc------CCeEEEECCccc---CccCC--
Confidence 9888775432211111 00 112334555555566779999999999842 688999887775 78899
Q ss_pred HHHHHHHHHHHcCCeEEEeCccC-Chh------hhcccCCeEEEecccccCcceeEEeecC-cccc
Q psy5413 226 WLRELKARCQEHNIPVHMDGARL-PLA------EVCASVDTVMFCLSKGLGAPVGSILAGP-EEFI 283 (285)
Q Consensus 226 ~l~~i~~la~~~gi~li~Dea~~-~~~------~~~~~~dv~~~s~sK~l~~p~gg~~~~~-~~~i 283 (285)
+++|+++|++||+++|+||+|. +.. ......|+++.|+||+|+|++||+++++ ++++
T Consensus 181 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~~~~~~ 245 (417)
T 3n0l_A 181 -FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGIIMTNDEELA 245 (417)
T ss_dssp -HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSCEEEEESCHHHH
T ss_pred -HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCeeEEEECCHHHH
Confidence 9999999999999999999975 221 1123568999999999988889999887 5554
No 152
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.85 E-value=1.8e-20 Score=171.98 Aligned_cols=207 Identities=16% Similarity=0.124 Sum_probs=131.9
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCCCCcc-CChhHHHHHHHHHhHc-CCCcEEEcCChHHHHHHHHHHccc
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGDDVYL-EDPTCKELQEKAAKLA-GKEAAIFVPSGTMGNLIAIMTHCD 138 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~~~y~-~~~~~~~l~~~la~~~-g~~~~~~~~~Gs~a~~~al~~~~~ 138 (285)
|+.++||.++. .++++|++.+++.+++.....|+ ..+...++++.+++.+ +.+.+++++||++|++.+++++..
T Consensus 56 g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~ 135 (453)
T 2cy8_A 56 GNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARA 135 (453)
T ss_dssp CCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHH
T ss_pred CCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 56788997663 34588999999998775422222 4556777777777776 567789999999999999998321
Q ss_pred -cCCCeEEe-cCCcceeeeccccccccccc--ccccce------eeeeeecCCCCCCCHHHHHHHhcccccccCCceEEE
Q psy5413 139 -RRDSEIIV-GDCSHIMLWEQGGASQTSVY--SQIGRV------LMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLV 208 (285)
Q Consensus 139 -~~g~~vi~-~~~~h~~~~~~~~~~~~~~~--~~~~g~------~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v 208 (285)
..+++||+ ...||+.+....... ...| ....|. .++.++. .|+++|+++|+++ ++++++|
T Consensus 136 ~~~~~~vi~~~~~yhg~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~----~~~~~~v 205 (453)
T 2cy8_A 136 FTGRRMILRFEGHYHGWHDFSASGY-NSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANH----GSDIAAF 205 (453)
T ss_dssp HHCCCEEEEECC-----------------------------CGGGEEEECT-----TCHHHHHHHHHHH----GGGEEEE
T ss_pred hhCCCEEEEEcCCcCCCchhhHhhc-CCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhc----CCCEEEE
Confidence 12345555 445675543221111 0000 000122 2233332 3899999999741 2378999
Q ss_pred EEecccCCCCe-eeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----hhcc----cCCeEEEecccccCc-ceeEEeec
Q psy5413 209 CVENTHNYCGG-TVLPMQWLRELKARCQEHNIPVHMDGARLPLA----EVCA----SVDTVMFCLSKGLGA-PVGSILAG 278 (285)
Q Consensus 209 ~i~~~~n~~gG-~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----~~~~----~~dv~~~s~sK~l~~-p~gg~~~~ 278 (285)
++++++|++ | .+.+.+++++|+++|++||++||+||+|+++. ...+ ..| +.++||++++ ..+|++++
T Consensus 206 i~ep~~~~t-G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d--i~s~sK~l~~G~~~G~v~~ 282 (453)
T 2cy8_A 206 IAEPVGSHF-GVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNHGMQALLDVQPD--LTCLAKASAGGLPGGILGG 282 (453)
T ss_dssp EECSSEHHH-HTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTTHHHHHHTCCCS--EEEEEGGGGTTSSCEEEEE
T ss_pred EECCCCCCC-CCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCchhhhHHhCCCCc--EEEEChhhhCCcceEEEec
Confidence 999988887 6 45679999999999999999999999998541 1111 235 4488899986 45667777
Q ss_pred Cccccc
Q psy5413 279 PEEFIQ 284 (285)
Q Consensus 279 ~~~~i~ 284 (285)
++++++
T Consensus 283 ~~~~~~ 288 (453)
T 2cy8_A 283 REDVMG 288 (453)
T ss_dssp CHHHHT
T ss_pred hHHHHH
Confidence 777665
No 153
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.85 E-value=2.2e-20 Score=171.21 Aligned_cols=189 Identities=13% Similarity=0.053 Sum_probs=136.3
Q ss_pred CCcHHHHHHHHhcccCCC--C------ccCChhH---HHHH-HHHHhHcCCCcEEE-cCChHHHHHHHHHHccccCCCeE
Q psy5413 78 KPTMEMKNYMFNCEVGDD--V------YLEDPTC---KELQ-EKAAKLAGKEAAIF-VPSGTMGNLIAIMTHCDRRDSEI 144 (285)
Q Consensus 78 ~~~~~v~~a~~~~~~~~~--~------y~~~~~~---~~l~-~~la~~~g~~~~~~-~~~Gs~a~~~al~~~~~~~g~~v 144 (285)
..+|++++++.+...+.. . |...+.. .+++ +.+++++|.+...+ ++||++|++.++++++ ++||+|
T Consensus 56 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~-~~Gd~V 134 (447)
T 3h7f_A 56 FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANAAVLHALM-SPGERL 134 (447)
T ss_dssp CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHC-CTTCEE
T ss_pred CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHhc-CCCCEE
Confidence 359999999987764211 1 1222222 3444 88999999988766 9999999999999987 699999
Q ss_pred EecCCcceeeecccc-cccccccccccceeeeeeecC-CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeC
Q psy5413 145 IVGDCSHIMLWEQGG-ASQTSVYSQIGRVLMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVL 222 (285)
Q Consensus 145 i~~~~~h~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~ 222 (285)
++.++.|......+. +. + ...+...+.++.+ +++.+|+++|++++++. ++++|++++++|++++
T Consensus 135 l~~~~~~~~~~~~~~~~~----~-~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~~i~~~~~~~~~~~--- 200 (447)
T 3h7f_A 135 LGLDLANGGHLTHGMRLN----F-SGKLYENGFYGVDPATHLIDMDAVRATALEF------RPKVIIAGWSAYPRVL--- 200 (447)
T ss_dssp EEECGGGTCCGGGTCTTS----H-HHHSSEEEEECCCTTTCSCCHHHHHHHHHHH------CCSEEEEECSSCCSCC---
T ss_pred EecCcccccccchhhhhh----h-cCCeeEEEEcCcCcccCCcCHHHHHHHHHhc------CCeEEEEcCCCCCCcc---
Confidence 998877754211111 11 0 0112344445543 45679999999999652 5789999888887633
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccC-Chh------hhcccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARL-PLA------EVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~-~~~------~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
+ +++|+++|++||++||+||+|. ++. ....++|+++.|+||+|+||+||++++++++++
T Consensus 201 ~---l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~~gG~i~~~~~~~~ 266 (447)
T 3h7f_A 201 D---FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRSGLIVGKQQYAK 266 (447)
T ss_dssp C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCCSCEEEEECGGGHH
T ss_pred C---HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCCCeEEEEECHHHHH
Confidence 5 9999999999999999999975 221 112467999999999999999999999887653
No 154
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.85 E-value=7.6e-21 Score=171.92 Aligned_cols=161 Identities=17% Similarity=0.164 Sum_probs=128.4
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecc-ccc-ccccccccccceeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQ-GGA-SQTSVYSQIGRVLMRG 176 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~-~~~-~~~~~~~~~~g~~~~~ 176 (285)
.+|...+|++.++++.|.+.+++++||++|++.+ ..++ ++||+|++.++.|..+... ... . ...|.+++.
T Consensus 65 ~~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~~-~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~------~~~g~~~~~ 136 (400)
T 3nmy_A 65 HNPTRFAYERCVAALEGGTRAFAFASGMAATSTV-MELL-DAGSHVVAMDDLYGGTFRLFERVRR------RTAGLDFSF 136 (400)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH-HTTS-CTTCEEEEESSCCHHHHHHHHHTHH------HHHCCEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEecCHHHHHHHH-HHHc-CCCCEEEEeCCCchHHHHHHHHhhH------hhcCeEEEE
Confidence 5788999999999999999899999999999985 4445 6899999988777533221 111 1 234778887
Q ss_pred eecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh---hhh
Q psy5413 177 VTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---AEV 253 (285)
Q Consensus 177 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---~~~ 253 (285)
++.. |+++++++|++ ++++|++++|+||+ |.++| +++|+++|++||+++|+||+|+.. ...
T Consensus 137 v~~~-----d~~~l~~~i~~-------~~~~v~~e~~~np~-G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~~ 200 (400)
T 3nmy_A 137 VDLT-----DPAAFKAAIRA-------DTKMVWIETPTNPM-LKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQRPL 200 (400)
T ss_dssp ECTT-----SHHHHHHHCCT-------TEEEEEEESSCTTT-CCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCGG
T ss_pred ECCC-----CHHHHHHHhcc-------CCCEEEEECCCCCC-Ceeec---HHHHHHHHHHcCCEEEEECCCcccccCChh
Confidence 7763 89999999987 89999999999999 89999 999999999999999999999822 123
Q ss_pred cccCCeEEEecccccCcc---eeE--EeecCcccc
Q psy5413 254 CASVDTVMFCLSKGLGAP---VGS--ILAGPEEFI 283 (285)
Q Consensus 254 ~~~~dv~~~s~sK~l~~p---~gg--~~~~~~~~i 283 (285)
..++|+++.|++|+++++ +|| +++++++++
T Consensus 201 ~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~ 235 (400)
T 3nmy_A 201 SLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELA 235 (400)
T ss_dssp GGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHH
T ss_pred hcCCcEEEecCccccCCCCCcceeEEEEeCCHHHH
Confidence 347899999999999974 677 455566554
No 155
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.85 E-value=2e-20 Score=171.56 Aligned_cols=211 Identities=12% Similarity=0.077 Sum_probs=141.3
Q ss_pred CCeeeeeccCC----cCCCcHHHH-H-HHHh---cccCCCCc---cCChhHHHHHHHHHhHcC---CCcEEEcCChHHHH
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMK-N-YMFN---CEVGDDVY---LEDPTCKELQEKAAKLAG---KEAAIFVPSGTMGN 129 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~-~-a~~~---~~~~~~~y---~~~~~~~~l~~~la~~~g---~~~~~~~~~Gs~a~ 129 (285)
|+.++||.++. .++++|++. + |+.+ +......| ...+...++++.++++++ .+.++|++||++|+
T Consensus 53 g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~ 132 (449)
T 2cjg_A 53 GRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAV 132 (449)
T ss_dssp CCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHH
T ss_pred CcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHH
Confidence 66788886543 345789999 8 9888 65432111 245668999999999984 56789999999999
Q ss_pred HHHHHHccc--c-----------CCCeEEecC-Ccceeeecccccccc-cccccc---cceeeeeeecCC--CC------
Q psy5413 130 LIAIMTHCD--R-----------RDSEIIVGD-CSHIMLWEQGGASQT-SVYSQI---GRVLMRGVTNQK--DG------ 183 (285)
Q Consensus 130 ~~al~~~~~--~-----------~g~~vi~~~-~~h~~~~~~~~~~~~-~~~~~~---~g~~~~~~~~~~--~~------ 183 (285)
+.+++++.. + ++++||+.+ .+|+++......... +.+... ....+..++.++ ..
T Consensus 133 ~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 212 (449)
T 2cjg_A 133 ENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAA 212 (449)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHH
T ss_pred HHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccch
Confidence 999987541 1 167787765 567665432222200 111111 112444555432 11
Q ss_pred --CCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcc-
Q psy5413 184 --TFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCA- 255 (285)
Q Consensus 184 --~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~- 255 (285)
..++++|+++|++ +.+++++|++++++|++|..+++.+++++|+++|++||++||+||+|+++.. ...
T Consensus 213 ~~~~~~~~le~~i~~----~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~ 288 (449)
T 2cjg_A 213 LEAEALRQARAAFET----RPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQ 288 (449)
T ss_dssp HHHHHHHHHHHHHHH----STTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHH
T ss_pred hhHHHHHHHHHHHHh----cCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecc
Confidence 1456778888864 2237999999999999844799999999999999999999999999984421 111
Q ss_pred ---cCCeEEEecccccCcceeEEeecCccccc
Q psy5413 256 ---SVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 256 ---~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
..| +.++||++ |.|++++ ++++++
T Consensus 289 ~~~~~d--i~t~sK~l--~iG~~~~-~~~~~~ 315 (449)
T 2cjg_A 289 LDVAPD--IVAFGKKT--QVCGVMA-GRRVDE 315 (449)
T ss_dssp HTCCCS--EEEECGGG--SSEEEEE-CGGGGG
T ss_pred cCCCce--EEEecCcc--cEEEEEE-CHHHhh
Confidence 234 45788999 7776554 556654
No 156
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.75 E-value=6.1e-23 Score=188.49 Aligned_cols=205 Identities=13% Similarity=0.053 Sum_probs=144.0
Q ss_pred cCCeeeeeccCCc----CCCcHHHHHHHHhcccCCC-CccCChhHHHHHHHHHhHc-CCCcEEEcCChHHHHHHHHHHcc
Q psy5413 64 VNIRTVDIRSDTI----SKPTMEMKNYMFNCEVGDD-VYLEDPTCKELQEKAAKLA-GKEAAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 64 ~~~~~~~~~~~~~----~~~~~~v~~a~~~~~~~~~-~y~~~~~~~~l~~~la~~~-g~~~~~~~~~Gs~a~~~al~~~~ 137 (285)
.|++++||.++.. ++.+|+|.+|+.+++.... ...+++...+|++.|++++ +.+.++|++||++|++.|++++.
T Consensus 98 dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar 177 (465)
T 2yky_A 98 DGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATAT 177 (465)
Confidence 3677788876554 5589999999998876432 2224677899999999998 77788999999999999999875
Q ss_pred ccCC-CeEEe-cCCcceeeecccccccccccccccce--eeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 138 DRRD-SEIIV-GDCSHIMLWEQGGASQTSVYSQIGRV--LMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 138 ~~~g-~~vi~-~~~~h~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
..+| ++||+ ...||+.+.... +. + ...|. .++.++. .|+++|++++++ +++++++|+++++
T Consensus 178 ~~tgr~~ii~~~~~yHG~~~~~~--sg-~---~~~g~~~~~~~~~~-----~d~~~l~~~l~~----~~~~~aavi~epv 242 (465)
T 2yky_A 178 AITGRKTVLAFDGGYHGGLLNFA--SG-H---APTNAPYHVVLGVY-----NDVEGTADLLKR----HGHDCAAILVEPM 242 (465)
Confidence 3344 55655 566787664322 10 0 01122 2223332 388999999975 2238999999998
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh----hcccCCeE--EEecccccCc-ceeEEeecCccccc
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE----VCASVDTV--MFCLSKGLGA-PVGSILAGPEEFIQ 284 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~----~~~~~dv~--~~s~sK~l~~-p~gg~~~~~~~~i~ 284 (285)
++.+|..+.+.+++++|+++|++||++||+||+|+ +.. ..+..++. +.+++|++++ ...|++++++++++
T Consensus 243 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg~G~piG~v~~~~~i~~ 319 (465)
T 2yky_A 243 LGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIGGGMSFGAFGGRRDLME 319 (465)
Confidence 77773355678999999999999999999999998 421 12222222 5688999988 33456777787765
No 157
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.85 E-value=2.3e-20 Score=169.97 Aligned_cols=213 Identities=15% Similarity=0.163 Sum_probs=143.1
Q ss_pred CCeeeeeccCCc----CCCcHHHHHHHHhcccCC-----CCccCChhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHHH
Q psy5413 65 NIRTVDIRSDTI----SKPTMEMKNYMFNCEVGD-----DVYLEDPTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 65 ~~~~~~~~~~~~----~~~~~~v~~a~~~~~~~~-----~~y~~~~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~al 133 (285)
|+.++||.++.+ ++++|++.+++.++.... ..| .++...++++.++++++ .+.++|++||++|++.++
T Consensus 42 g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai 120 (429)
T 1s0a_A 42 GRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGI-THAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAM 120 (429)
T ss_dssp SCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSE-ECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHH
T ss_pred CCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccc-CCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHH
Confidence 567788876542 346899999998776421 123 35667899999999994 567899999999999999
Q ss_pred HHccc--c----CCCeEEecC-Ccceeeeccccccc-----ccccc-cccceeeeeeecC----CCCCCCHHHHHHHhcc
Q psy5413 134 MTHCD--R----RDSEIIVGD-CSHIMLWEQGGASQ-----TSVYS-QIGRVLMRGVTNQ----KDGTFDLDEMEAKFST 196 (285)
Q Consensus 134 ~~~~~--~----~g~~vi~~~-~~h~~~~~~~~~~~-----~~~~~-~~~g~~~~~~~~~----~~~~~d~~~l~~~i~~ 196 (285)
+++.. + +|++|++.+ .+|.+......+.. ...|. ...+...+.++.. ..+.+|+++|++++++
T Consensus 121 ~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 200 (429)
T 1s0a_A 121 KMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAA 200 (429)
T ss_dssp HHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHH
T ss_pred HHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHh
Confidence 87541 2 477888765 56765432211110 00010 0113344444321 1235799999999974
Q ss_pred cccccCCceEEEEEecc-cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcc----cCCeEEEeccc
Q psy5413 197 ADNIHCASTSLVCVENT-HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCA----SVDTVMFCLSK 266 (285)
Q Consensus 197 ~~~~~~~~~~~v~i~~~-~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~----~~dv~~~s~sK 266 (285)
+.+++++|+++++ +|++|..+.+.+++++|+++|++||++||+||+|+++.. ..+ ..| +.++||
T Consensus 201 ----~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d--~~t~sK 274 (429)
T 1s0a_A 201 ----HRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPD--ILCLGK 274 (429)
T ss_dssp ----HTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCS--EEEECG
T ss_pred ----CCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCC--EEEecc
Confidence 1227889999988 899944677899999999999999999999999984321 111 234 457889
Q ss_pred ccCc--ceeEEeecCccccc
Q psy5413 267 GLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 267 ~l~~--p~gg~~~~~~~~i~ 284 (285)
++++ .+.|++++++++++
T Consensus 275 ~l~~G~~~iG~~~~~~~~~~ 294 (429)
T 1s0a_A 275 ALTGGTMTLSATLTTREVAE 294 (429)
T ss_dssp GGGTSSSCCEEEEECHHHHH
T ss_pred cccCCCccceEEEeCHHHHH
Confidence 9986 34567777776653
No 158
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.85 E-value=3.9e-21 Score=171.53 Aligned_cols=179 Identities=18% Similarity=0.164 Sum_probs=139.5
Q ss_pred cHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecccc
Q psy5413 80 TMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGG 159 (285)
Q Consensus 80 ~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~ 159 (285)
.+++.+++.+.... ..|...+...++++.+++++|.+.+++++||++|++.+++++..++|++|+++.++|..+....
T Consensus 15 ~~~v~~a~~~~~~~-~~~~~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~- 92 (367)
T 3nyt_A 15 KDKIDAGIQRVLRH-GQYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETV- 92 (367)
T ss_dssp HHHHHHHHHHHHHH-CCCSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH-
T ss_pred CHHHHHHHHHHHhc-CCccCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH-
Confidence 45777777665542 2455678899999999999999999999999999999999983368999999988886654422
Q ss_pred cccccccccccceeeeeeecCCC-CCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcC
Q psy5413 160 ASQTSVYSQIGRVLMRGVTNQKD-GTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHN 238 (285)
Q Consensus 160 ~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~g 238 (285)
...|.+++.++.+++ +.+|+++++++|++ ++++|+ ++|++ |...+ +++|.++|++||
T Consensus 93 --------~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~v~---~~~~~-G~~~~---~~~i~~la~~~~ 150 (367)
T 3nyt_A 93 --------ALLGAKPVYVDIDPRTYNLDPQLLEAAITP-------RTKAII---PVSLY-GQCAD---FDAINAIASKYG 150 (367)
T ss_dssp --------HHTTCEEEEECBCTTTCSBCGGGTGGGCCT-------TEEEEC---CBCGG-GCCCC---HHHHHHHHHHTT
T ss_pred --------HHcCCEEEEEecCCccCCcCHHHHHHhcCc-------CCcEEE---eeCCc-cChhh---HHHHHHHHHHcC
Confidence 234888888887654 78899999999977 889988 45566 88888 999999999999
Q ss_pred CeEEEeCccC-Chhh----hcccCCeEEEec--ccccCc-ceeEEeecC-ccc
Q psy5413 239 IPVHMDGARL-PLAE----VCASVDTVMFCL--SKGLGA-PVGSILAGP-EEF 282 (285)
Q Consensus 239 i~li~Dea~~-~~~~----~~~~~dv~~~s~--sK~l~~-p~gg~~~~~-~~~ 282 (285)
++||+|++|+ +... .....|++++|| +|++++ ..||+++.+ +++
T Consensus 151 ~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l 203 (367)
T 3nyt_A 151 IPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDEL 203 (367)
T ss_dssp CCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHH
T ss_pred CEEEEECccccCCeECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHH
Confidence 9999999987 2211 111228888886 899988 567777764 444
No 159
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.85 E-value=1.1e-20 Score=172.69 Aligned_cols=207 Identities=13% Similarity=0.034 Sum_probs=144.4
Q ss_pred Ceee-eeccCCcCCCc---HHHHHHHHhcccC-------C------CCccCChhHHHHHHHHHhHc--------CCCcEE
Q psy5413 66 IRTV-DIRSDTISKPT---MEMKNYMFNCEVG-------D------DVYLEDPTCKELQEKAAKLA--------GKEAAI 120 (285)
Q Consensus 66 ~~~~-~~~~~~~~~~~---~~v~~a~~~~~~~-------~------~~y~~~~~~~~l~~~la~~~--------g~~~~~ 120 (285)
+.++ +|..+.+.... +.+.+++.+...+ . ..|.......++++.+++++ ..+.++
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~ 110 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIA 110 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEE
Confidence 4568 88888877632 3445555544333 1 24665556789999999987 235679
Q ss_pred EcCChHHHHHHHHHHccccCCC--------------eEEec-CCcceeeecccccccccccccccceeeeeeecCC-C--
Q psy5413 121 FVPSGTMGNLIAIMTHCDRRDS--------------EIIVG-DCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-D-- 182 (285)
Q Consensus 121 ~~~~Gs~a~~~al~~~~~~~g~--------------~vi~~-~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-- 182 (285)
+++||++|+..++++++ ++|+ +|++. .+.|.......... ..+ ...+..++.++.++ +
T Consensus 111 ~t~G~t~al~~~~~~l~-~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~g~ 186 (444)
T 3if2_A 111 LTNGSQNAFFYLFNLFG-GAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEG--QHF-AAVLPHIDEVTHDGEEGF 186 (444)
T ss_dssp EESSHHHHHHHHHHHSS-EEEECC-------CEEEEEEEESSSSCCGGGTTCCSSS--CCE-EECCCEEEEEEETTEEEE
T ss_pred EecCcHHHHHHHHHHHh-CCCccccccccccccccceEEEeCCCCccchhhccccc--chh-hccCceEEecccccccCc
Confidence 99999999999999987 5776 67764 44443322111000 000 23467777777643 2
Q ss_pred --CCCCHHHHHHH---hcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----hh
Q psy5413 183 --GTFDLDEMEAK---FSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----EV 253 (285)
Q Consensus 183 --~~~d~~~l~~~---i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----~~ 253 (285)
+.+|+++|+++ +.+ ++++|++++|+||+ |.++|.+++++|+++|++||+++|+||+|.... ..
T Consensus 187 ~~~~~d~~~l~~~l~~~~~-------~~~~v~i~~p~npt-G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 258 (444)
T 3if2_A 187 FKYRVDFEALENLPALKEG-------RIGAICCSRPTNPT-GNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYS 258 (444)
T ss_dssp EEEECCHHHHHTCHHHHTT-------CEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCS
T ss_pred cccCCCHHHHHHHHHhcCC-------CceEEEeCCCCCCC-CCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccc
Confidence 36899999998 444 79999999999999 899999999999999999999999999987211 11
Q ss_pred -----cccCCeEEEecccccCc-ceeEEeecCccccc
Q psy5413 254 -----CASVDTVMFCLSKGLGA-PVGSILAGPEEFIQ 284 (285)
Q Consensus 254 -----~~~~dv~~~s~sK~l~~-p~gg~~~~~~~~i~ 284 (285)
....++++.|+||++.. .+.|+++.++++++
T Consensus 259 ~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~~ 295 (444)
T 3if2_A 259 DAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAKVIE 295 (444)
T ss_dssp CCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHHHHH
T ss_pred cccccCCCCEEEEechhhccCCCCceEEEEECHHHHH
Confidence 12344669999997433 56678888877653
No 160
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.85 E-value=7.6e-21 Score=170.42 Aligned_cols=187 Identities=13% Similarity=0.052 Sum_probs=138.1
Q ss_pred CC-eeeeeccCC-cCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCC---CcEEEcCChHHHHHHHHHHcccc
Q psy5413 65 NI-RTVDIRSDT-ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGK---EAAIFVPSGTMGNLIAIMTHCDR 139 (285)
Q Consensus 65 ~~-~~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~---~~~~~~~~Gs~a~~~al~~~~~~ 139 (285)
|. +++|+.... ....++++++++.. .. ++.....++++.+++++|. +.+++++||++|+..+++++
T Consensus 26 g~~~v~~~~~~~~~~~~~~~v~~a~~~----~~--~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--- 96 (374)
T 2aeu_A 26 GRDALYDLSGLSGGFLIDEKDKALLNT----YI--GSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--- 96 (374)
T ss_dssp CGGGCEECSSCCCCCCCCHHHHHHHTS----TT--HHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH---
T ss_pred CccceeeecccCCCCCCCHHHHHHHHH----hc--CchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC---
Confidence 44 577877654 34567899999861 11 1123345677777788898 66799999999999999975
Q ss_pred CCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEE-EEEecccCCCC
Q psy5413 140 RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSL-VCVENTHNYCG 218 (285)
Q Consensus 140 ~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~-v~i~~~~n~~g 218 (285)
+||+|+++.+.|.......... ...|.+++.+ .|+++++++ ++ ++++ |++++|+||+
T Consensus 97 ~gd~Vl~~~~~y~~~~~~~~~~------~~~g~~~~~v-------~d~~~l~~~-~~-------~~~~~v~~~~p~npt- 154 (374)
T 2aeu_A 97 KPKKVIHYLPELPGHPSIERSC------KIVNAKYFES-------DKVGEILNK-ID-------KDTLVIITGSTMDLK- 154 (374)
T ss_dssp CCSEEEEECSSSSCCTHHHHHH------HHTTCEEEEE-------SCHHHHHTT-CC-------TTEEEEEECBCTTSC-
T ss_pred CCCEEEEecCCCCccHHHHHHH------HHcCcEEEEe-------CCHHHHHhc-CC-------CccEEEEEccCCCCC-
Confidence 8999998877543322100011 2347777766 288999887 54 7899 9999999998
Q ss_pred eeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh--------hhcccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 219 GTVLPMQWLRELKARCQEHNIPVHMDGARLPLA--------EVCASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~--------~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
|. +..++++|.++|++||+++|+||+|.... ....+.|+++.|+||+++|+++|++++++++++
T Consensus 155 G~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~~~~~ 226 (374)
T 2aeu_A 155 VI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVD 226 (374)
T ss_dssp BC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHH
T ss_pred CC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECHHHHH
Confidence 64 56679999999999999999999987321 122357899999999999889999988887764
No 161
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.84 E-value=1.1e-20 Score=169.86 Aligned_cols=197 Identities=12% Similarity=-0.008 Sum_probs=145.1
Q ss_pred CeeeeeccC---CcCC---CcHHHHHHHHh-cccC--CCCccCChhHHHHHHHHHhHcCC--------C--cEEEcCChH
Q psy5413 66 IRTVDIRSD---TISK---PTMEMKNYMFN-CEVG--DDVYLEDPTCKELQEKAAKLAGK--------E--AAIFVPSGT 126 (285)
Q Consensus 66 ~~~~~~~~~---~~~~---~~~~v~~a~~~-~~~~--~~~y~~~~~~~~l~~~la~~~g~--------~--~~~~~~~Gs 126 (285)
..+++|..+ ++.. .++++.+++.+ .... ...|.......++++.++++++. + .+++++||+
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~ 105 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGS 105 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcH
Confidence 356888777 2332 34799999988 6653 34566556678899999998732 4 568999999
Q ss_pred HHHHHHHHH--ccccCCCeEEecCCcceeeecccccccccccccccceeeeeeec--CCCCCCCHHHHHHHhcccccccC
Q psy5413 127 MGNLIAIMT--HCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN--QKDGTFDLDEMEAKFSTADNIHC 202 (285)
Q Consensus 127 ~a~~~al~~--~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~ 202 (285)
+|+..+++. ++ ++||+|+++.++|....... ...|.+++.++. .+++.+|++++++++++ +.
T Consensus 106 ~a~~~~~~~~~~~-~~gd~vl~~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~ 171 (397)
T 3fsl_A 106 GALKVGADFLKRY-FPESGVWVSDPTWENHVAIF---------AGAGFEVSTYPWYDEATNGVRFNDLLATLKT----LQ 171 (397)
T ss_dssp HHHHHHHHHHHHH-CTTCCEEEESSCCHHHHHHH---------HHTTCCEEEECCEETTTTEECHHHHHHHHTT----CC
T ss_pred HHHHHHHHHHHhc-CCCCeEEEeCCCchhHHHHH---------HHcCCceEEEeeeeccCCcCcHHHHHHHHHh----CC
Confidence 999999643 34 58999999888775543321 234778888876 34667899999999985 22
Q ss_pred CceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-----------hhcccC--CeEEEecccccC
Q psy5413 203 ASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-----------EVCASV--DTVMFCLSKGLG 269 (285)
Q Consensus 203 ~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-----------~~~~~~--dv~~~s~sK~l~ 269 (285)
++++++++++|+||| |.+++.+++++|+++|++||+++|+||+|..+. .+.... .+++.|+||.++
T Consensus 172 ~~~~~v~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 250 (397)
T 3fsl_A 172 AGSIVLLHPCCHNPT-GADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFS 250 (397)
T ss_dssp TTCEEEECSSSCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT
T ss_pred CCCEEEEeCCCCCCC-CcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEeccccccc
Confidence 378999999999999 899999999999999999999999999987221 111122 245899999987
Q ss_pred c--ceeEEee
Q psy5413 270 A--PVGSILA 277 (285)
Q Consensus 270 ~--p~gg~~~ 277 (285)
. .+.|+++
T Consensus 251 ~~G~riG~~~ 260 (397)
T 3fsl_A 251 LYGERVGGLS 260 (397)
T ss_dssp CGGGCCEEEE
T ss_pred CcCCCeeEEE
Confidence 3 4445653
No 162
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.84 E-value=1.4e-20 Score=173.81 Aligned_cols=195 Identities=18% Similarity=0.220 Sum_probs=144.9
Q ss_pred eeeeccCCcCCCcHHHHHHHHhcccCCCCccCC-------hhHHHHHHHHHhHcCCCcE-EEcCChHHHHHHHHHHcc--
Q psy5413 68 TVDIRSDTISKPTMEMKNYMFNCEVGDDVYLED-------PTCKELQEKAAKLAGKEAA-IFVPSGTMGNLIAIMTHC-- 137 (285)
Q Consensus 68 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~-------~~~~~l~~~la~~~g~~~~-~~~~~Gs~a~~~al~~~~-- 137 (285)
++.+. +...+..|++.+++.+.......|... +...++++.+++++|.+.. +++++|++|+..+++++.
T Consensus 68 ~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~ 146 (474)
T 1wyu_B 68 FYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAY 146 (474)
T ss_dssp CCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHH
T ss_pred ccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHH
Confidence 34444 333456688888887663333333321 3467788888999998876 477899999998777653
Q ss_pred -ccCCC-----eEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEe
Q psy5413 138 -DRRDS-----EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVE 211 (285)
Q Consensus 138 -~~~g~-----~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~ 211 (285)
.++|| +|+++.++|..+.... ...|.+++.++.++++.+|+++|+++|++ ++++|+++
T Consensus 147 ~~~~Gd~~~r~~Vlv~~~~h~~~~~~~---------~~~G~~vv~v~~~~~~~~d~~~L~~~i~~-------~t~~v~~~ 210 (474)
T 1wyu_B 147 HEDRGEGRTRRVVLVPDSAHGSNPATA---------SMAGYQVREIPSGPEGEVDLEALKRELGP-------HVAALMLT 210 (474)
T ss_dssp HHHTTCTTTCCEEEEETTSCTHHHHHH---------HHTTCEEEEECBCTTSSBCHHHHHHHCST-------TEEEEEEC
T ss_pred HHhcCCccCCCEEEEeCCcChhhHHHH---------HHCCCEEEEecCCCCCCcCHHHHHHhhCC-------CceEEEEE
Confidence 13676 8999999997765432 23488999998877888999999999987 79999999
Q ss_pred cccCCCCeee-CCHHHHHHHHHHHHHcCCeEEEeCccCC----hhh-hcccCCeEEEecccccCcc------eeEEeecC
Q psy5413 212 NTHNYCGGTV-LPMQWLRELKARCQEHNIPVHMDGARLP----LAE-VCASVDTVMFCLSKGLGAP------VGSILAGP 279 (285)
Q Consensus 212 ~~~n~~gG~~-~~~~~l~~i~~la~~~gi~li~Dea~~~----~~~-~~~~~dv~~~s~sK~l~~p------~gg~~~~~ 279 (285)
+|+ ++ |.+ .+ +++|+++|++||+++|+||+|.. ... ...+.|+++.++||++++| ..|+++.+
T Consensus 211 ~pn-~~-G~~~~~---l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~ 285 (474)
T 1wyu_B 211 NPN-TL-GLFERR---ILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVK 285 (474)
T ss_dssp SSC-TT-SCCCTT---HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEEC
T ss_pred CCC-CC-cccCCC---HHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEc
Confidence 984 67 777 46 99999999999999999999861 111 1236899999999999865 46788777
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 286 ~~l~~ 290 (474)
T 1wyu_B 286 AHLAP 290 (474)
T ss_dssp GGGGG
T ss_pred HHHHH
Confidence 77654
No 163
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.84 E-value=2.3e-20 Score=173.31 Aligned_cols=195 Identities=15% Similarity=0.157 Sum_probs=140.0
Q ss_pred CCCcHHHHHHHHhcccC--CCCccCChhHHHHHHH----HHhHcCC---CcEEEcCChHHHHHHHHHHccc---------
Q psy5413 77 SKPTMEMKNYMFNCEVG--DDVYLEDPTCKELQEK----AAKLAGK---EAAIFVPSGTMGNLIAIMTHCD--------- 138 (285)
Q Consensus 77 ~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~----la~~~g~---~~~~~~~~Gs~a~~~al~~~~~--------- 138 (285)
+...+.+++++.....+ ...|...+...++++. +++++|. +.++|++|||+|++.++.++..
T Consensus 110 ~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~ 189 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGH 189 (497)
T ss_dssp CCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence 34577888887654443 2345656666666666 7888887 3569999999999999998521
Q ss_pred ---cC------CC-eEEecCCcceeeecccccccccccccccce-eeeeeecCCCCCCCHHHHHHHhcccccccCCceEE
Q psy5413 139 ---RR------DS-EIIVGDCSHIMLWEQGGASQTSVYSQIGRV-LMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 139 ---~~------g~-~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
.+ |+ .|+++...|.+........ . .|. +++.+|.++++.+|+++|+++|+++... +.++.+
T Consensus 190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~------g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~-~~~~~~ 261 (497)
T 2qma_A 190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWM------G-LGEKAVMTVDANADGTMDITKLDEVIAQAKAE-GLIPFA 261 (497)
T ss_dssp CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHT------T-SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHT-TCEEEE
T ss_pred chhhcccccccCCeEEEECCCchHHHHHHHHHc------C-CCcccEEEEecCCCCcCCHHHHHHHHHHHHHC-CCcceE
Confidence 12 35 6888888887765533333 1 133 6788888778889999999999762111 112458
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-------h--cccCCeEEEecccccCcc--eeEEe
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-------V--CASVDTVMFCLSKGLGAP--VGSIL 276 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-------~--~~~~dv~~~s~sK~l~~p--~gg~~ 276 (285)
|+++.++|++ |.+.| +++|+++|++||+|+|+|++|++... + .+.+|++++++|||+++| .|+++
T Consensus 262 vv~~~~~~~t-G~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~ 337 (497)
T 2qma_A 262 IVGTAGTTDH-GAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTISCGALL 337 (497)
T ss_dssp EEEEBSCTTT-CCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSCEEEE
T ss_pred EEEcCCCCCC-CCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcceEEEE
Confidence 8889999999 88999 99999999999999999999882211 1 147799999999999885 45566
Q ss_pred ecCcccc
Q psy5413 277 AGPEEFI 283 (285)
Q Consensus 277 ~~~~~~i 283 (285)
+.++..+
T Consensus 338 ~~~~~~~ 344 (497)
T 2qma_A 338 VNDKSNF 344 (497)
T ss_dssp ESCGGGG
T ss_pred EeCHHHH
Confidence 6666543
No 164
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.84 E-value=2.3e-20 Score=167.84 Aligned_cols=205 Identities=14% Similarity=0.057 Sum_probs=137.4
Q ss_pred CCeeeeeccC----CcCCCcHHHHHHHHhcccCC----CCccCChhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSD----TISKPTMEMKNYMFNCEVGD----DVYLEDPTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~----~~~~~~~~v~~a~~~~~~~~----~~y~~~~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~al~ 134 (285)
|+.++||.++ ..++++|++.+++.++.... ..| ..+...++++.++++++ .+.+++++||++|+..+++
T Consensus 44 g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~ 122 (395)
T 1vef_A 44 GNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALK 122 (395)
T ss_dssp SCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHH
Confidence 4577888765 23448899999988766421 123 46779999999999994 4567999999999999998
Q ss_pred Hccc-cCCCeEEecCC-cceeeecccccccccccc---cccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEE
Q psy5413 135 THCD-RRDSEIIVGDC-SHIMLWEQGGASQTSVYS---QIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVC 209 (285)
Q Consensus 135 ~~~~-~~g~~vi~~~~-~h~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 209 (285)
++.. .++++|++.++ +|..............+. ......+..++. .|+++|++++++ ++++|+
T Consensus 123 ~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~-------~~~~v~ 190 (395)
T 1vef_A 123 FARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDE-------ETAAVI 190 (395)
T ss_dssp HHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCT-------TEEEEE
T ss_pred HHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhcc-------CEEEEE
Confidence 7631 36777776554 555443221111000000 000001222222 489999999986 789999
Q ss_pred EecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh--------h-cccCCeEEEecccccCc-ceeEEeecC
Q psy5413 210 VENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE--------V-CASVDTVMFCLSKGLGA-PVGSILAGP 279 (285)
Q Consensus 210 i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~--------~-~~~~dv~~~s~sK~l~~-p~gg~~~~~ 279 (285)
+++++|++|....+.+++++|+++|++||++||+||+|+++.. . ....|++ ++||++++ .+.|+++.+
T Consensus 191 ~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~ 268 (395)
T 1vef_A 191 LEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMR 268 (395)
T ss_dssp ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEE
T ss_pred EeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEeh
Confidence 9999998833456789999999999999999999999984321 1 1235655 77999987 334556555
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 269 ~~~~~ 273 (395)
T 1vef_A 269 EEVAR 273 (395)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55543
No 165
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.84 E-value=1.5e-20 Score=172.20 Aligned_cols=213 Identities=17% Similarity=0.159 Sum_probs=139.8
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCC--CC--ccCChhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHHHH
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGD--DV--YLEDPTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIAIM 134 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~--~~--y~~~~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~al~ 134 (285)
|+.++||.++. .++++|++.+++.+++... .. .+..+...++++.++++++ .+.++|++||++|++.+++
T Consensus 49 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~ 128 (449)
T 3a8u_X 49 GRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVK 128 (449)
T ss_dssp CCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHH
T ss_pred CCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHH
Confidence 56678876433 3456899999998877542 12 2345678899999999984 4567999999999999999
Q ss_pred Hccc-------cCCCeEEe-cCCcceeeecccccccccccccc-----cceeeeeeecCCC---CCCC--------HHHH
Q psy5413 135 THCD-------RRDSEIIV-GDCSHIMLWEQGGASQTSVYSQI-----GRVLMRGVTNQKD---GTFD--------LDEM 190 (285)
Q Consensus 135 ~~~~-------~~g~~vi~-~~~~h~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~---~~~d--------~~~l 190 (285)
++.. .++++|++ ...+|.++.........+.+... .+...+.++.... ..+| +++|
T Consensus 129 ~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~l 208 (449)
T 3a8u_X 129 MVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADEL 208 (449)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHH
Confidence 8763 14677776 55667655322211100011111 1344444432111 1135 9999
Q ss_pred HHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcc----cCCeEE
Q psy5413 191 EAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCA----SVDTVM 261 (285)
Q Consensus 191 ~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~----~~dv~~ 261 (285)
+++|++. ..+++++|++++.+|++|..+.+.+++++|+++|++||++||+||+|+++.. ..+ ..|++
T Consensus 209 e~~l~~~---~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~- 284 (449)
T 3a8u_X 209 LKLIELH---DASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM- 284 (449)
T ss_dssp HHHHHHH---CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE-
T ss_pred HHHHHhc---CCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE-
Confidence 9999741 0127899999998888733466799999999999999999999999963321 111 23544
Q ss_pred EecccccCc---ceeEEeecCcccc
Q psy5413 262 FCLSKGLGA---PVGSILAGPEEFI 283 (285)
Q Consensus 262 ~s~sK~l~~---p~gg~~~~~~~~i 283 (285)
++||++++ |.|+ ++.+++++
T Consensus 285 -s~sK~l~~G~~~~G~-~~~~~~~~ 307 (449)
T 3a8u_X 285 -CIAKQVTNGAIPMGA-VIASTEIY 307 (449)
T ss_dssp -EECGGGGTTSSCCEE-EEEEHHHH
T ss_pred -EEcccccCCCCceEE-EEECHHHH
Confidence 88899986 3554 55556654
No 166
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.84 E-value=2.4e-20 Score=166.41 Aligned_cols=204 Identities=19% Similarity=0.156 Sum_probs=139.7
Q ss_pred CCeeeeeccCCc---C-CCcHHHHHHHHhcccC----CCCccCChhHHHHHHHHHhHcCC-CcEEEcCChHHHHHHHHHH
Q psy5413 65 NIRTVDIRSDTI---S-KPTMEMKNYMFNCEVG----DDVYLEDPTCKELQEKAAKLAGK-EAAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 65 ~~~~~~~~~~~~---~-~~~~~v~~a~~~~~~~----~~~y~~~~~~~~l~~~la~~~g~-~~~~~~~~Gs~a~~~al~~ 135 (285)
|+.++||.++.+ . ++++++.+++.+.... ...| +.+...++++.+++++|. +.+++++||++|+..++++
T Consensus 27 g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~ 105 (375)
T 2eh6_A 27 GKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKL 105 (375)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHH
T ss_pred CCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHH
Confidence 567889987643 2 2788999998876542 1245 456789999999999998 7789999999999999986
Q ss_pred c--cc---cCC-CeEEecCCc-ceeeecccccccccccccc---cceeeeeeecCCCCCCCHHHHHHHhcccccccCCce
Q psy5413 136 H--CD---RRD-SEIIVGDCS-HIMLWEQGGASQTSVYSQI---GRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCAST 205 (285)
Q Consensus 136 ~--~~---~~g-~~vi~~~~~-h~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 205 (285)
+ .. ++| ++|++.++. |.+............+... ....+..++. .|+++|++++++ ++
T Consensus 106 ~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~-------~~ 173 (375)
T 2eh6_A 106 ARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLDE-------ET 173 (375)
T ss_dssp HHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCCT-------TE
T ss_pred HHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhcC-------Ce
Confidence 3 22 467 888887654 5543321111100000000 0001222222 489999999976 79
Q ss_pred EEEEEecccCCCCeee-CCHHHHHHHHHHHHHcCCeEEEeCccCChhh------h-ccc--CCeEEEecccccCc-ceeE
Q psy5413 206 SLVCVENTHNYCGGTV-LPMQWLRELKARCQEHNIPVHMDGARLPLAE------V-CAS--VDTVMFCLSKGLGA-PVGS 274 (285)
Q Consensus 206 ~~v~i~~~~n~~gG~~-~~~~~l~~i~~la~~~gi~li~Dea~~~~~~------~-~~~--~dv~~~s~sK~l~~-p~gg 274 (285)
++|++++++|++ |.+ .+.+++++|+++|++||+++|+||+|+++.. . ..+ .|++ ++||++++ .+.|
T Consensus 174 ~~v~~~~~~~~t-G~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~--s~SK~~~~g~~~G 250 (375)
T 2eh6_A 174 AGIIIEVIQGEG-GVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI--ALAKGLGGGVPIG 250 (375)
T ss_dssp EEEEECSEETTT-TSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSCCE
T ss_pred EEEEEeCccCCC-CCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE--EEcccccCCCCeE
Confidence 999999999999 555 6799999999999999999999999883211 1 112 5655 67799987 3445
Q ss_pred EeecCccccc
Q psy5413 275 ILAGPEEFIQ 284 (285)
Q Consensus 275 ~~~~~~~~i~ 284 (285)
+++.++++++
T Consensus 251 ~~~~~~~~~~ 260 (375)
T 2eh6_A 251 AILAREEVAQ 260 (375)
T ss_dssp EEEEEHHHHT
T ss_pred EEEEcHHHHh
Confidence 6666666654
No 167
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.84 E-value=5.3e-21 Score=186.65 Aligned_cols=236 Identities=15% Similarity=0.134 Sum_probs=150.9
Q ss_pred CCccccccccc--cccccCCC----CCccceeeccCCccccccccCCeeeeeccCCcCCC-cHHHHHHHHhccc--CCCC
Q psy5413 26 TPALVESTPLS--RSWSDNGN----LSIPAMYCWLLPVPLRLGKVNIRTVDIRSDTISKP-TMEMKNYMFNCEV--GDDV 96 (285)
Q Consensus 26 ~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~a~~~~~~--~~~~ 96 (285)
+|..+.++.+. +.|+..++ .++++++.||.. +.++. +|++.+|+.+|+. .+..
T Consensus 356 ~p~~i~~a~G~g~~l~D~dG~~~~~~ylD~~sg~~~~------------------~lGh~~~p~i~~Ai~~Q~~~l~h~~ 417 (831)
T 4a0g_A 356 TVTVIDSRCGENFSIYKASDNSSLSQQFDACASWWTQ------------------GPDPTFQAELAREMGYTAARFGHVM 417 (831)
T ss_dssp GCEEEEEEETTEEEEEEHHHHSEEEEEEETTHHHHTC------------------CCCHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCeEEEEeeccceEEEECCCCccchheeeecccHhhc------------------CCCCCCCHHHHHHHHHHHhhccccc
Confidence 34555566553 66665555 556666666653 33778 9999999998875 2332
Q ss_pred c--cCChhHHHHHHHHHhHcC---CCcEEEcCChHHHHHHHHHHccc----cC-----------CC-eEEe-cCCcceee
Q psy5413 97 Y--LEDPTCKELQEKAAKLAG---KEAAIFVPSGTMGNLIAIMTHCD----RR-----------DS-EIIV-GDCSHIML 154 (285)
Q Consensus 97 y--~~~~~~~~l~~~la~~~g---~~~~~~~~~Gs~a~~~al~~~~~----~~-----------g~-~vi~-~~~~h~~~ 154 (285)
+ ..++...+|+++|+++.+ .++++|++|||+||+.|++++++ .+ ++ +||. ...||+.+
T Consensus 418 ~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T 497 (831)
T 4a0g_A 418 FPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDT 497 (831)
T ss_dssp CTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSS
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCc
Confidence 2 245678899999999986 56789999999999999999831 11 23 3443 67889887
Q ss_pred eccccccccccccc--------ccce-------------eeeeeecCCC-------CCCC------------------HH
Q psy5413 155 WEQGGASQTSVYSQ--------IGRV-------------LMRGVTNQKD-------GTFD------------------LD 188 (285)
Q Consensus 155 ~~~~~~~~~~~~~~--------~~g~-------------~~~~~~~~~~-------~~~d------------------~~ 188 (285)
..+..++....|.. .++. ..+..|.... ...+ ++
T Consensus 498 ~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (831)
T 4a0g_A 498 LGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSA 577 (831)
T ss_dssp HHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHH
T ss_pred eeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHH
Confidence 55333321122221 1111 1112221000 0012 35
Q ss_pred HHHHHhcccc-cccCCceEEEEEecc-cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh-----hhhcccCCeE-
Q psy5413 189 EMEAKFSTAD-NIHCASTSLVCVENT-HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL-----AEVCASVDTV- 260 (285)
Q Consensus 189 ~l~~~i~~~~-~~~~~~~~~v~i~~~-~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~-----~~~~~~~dv~- 260 (285)
+|++.|++.. ..+.+++++|++|++ ++.+|..++|+++|++|+++|++||++||+||+++++ .+..+..++.
T Consensus 578 ~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~P 657 (831)
T 4a0g_A 578 YLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKP 657 (831)
T ss_dssp HHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCC
T ss_pred HHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCC
Confidence 6777775311 123458999999997 9998888899999999999999999999999998843 2223333333
Q ss_pred -EEecccccCc---ceeEEeecC
Q psy5413 261 -MFCLSKGLGA---PVGSILAGP 279 (285)
Q Consensus 261 -~~s~sK~l~~---p~gg~~~~~ 279 (285)
+++++|.|++ |+|++++++
T Consensus 658 DiitlsK~L~gG~~Plgav~~~~ 680 (831)
T 4a0g_A 658 DIACFAKLLTGGMVPLAVTLATD 680 (831)
T ss_dssp SEEEECGGGGTTSSCCEEEEECH
T ss_pred cEEEEecccccCccCcEEEEECH
Confidence 5678899966 667666553
No 168
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.84 E-value=1.7e-20 Score=167.14 Aligned_cols=182 Identities=14% Similarity=0.109 Sum_probs=142.2
Q ss_pred CCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc---cccCCCeEEecCCccee
Q psy5413 77 SKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH---CDRRDSEIIVGDCSHIM 153 (285)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~---~~~~g~~vi~~~~~h~~ 153 (285)
...+|++++++.+..... .+.+.+...++++.+++++|.+.+++++||++|+..+++++ . ++|++|+++.+.|..
T Consensus 9 ~~~~~~v~~a~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~-~~gd~Vl~~~~~~~~ 86 (375)
T 2fnu_A 9 PCLDKEDKKAVLEVLNSK-QLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFS-ADRNEIITTPISFVA 86 (375)
T ss_dssp CCCCHHHHHHHHHHHTSS-CCSSSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCC-TTSCEEEECSSSCTH
T ss_pred CCCCHHHHHHHHHHHHcC-cccCChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccC-CCCCEEEECCCccHh
Confidence 346889999998876532 34456789999999999999998899999999999999998 5 589999999888866
Q ss_pred eecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHH
Q psy5413 154 LWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKAR 233 (285)
Q Consensus 154 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~l 233 (285)
..... ...|.+++.++.++++.+|+++|++++++ ++++|+++++ + |.+.| +++|.++
T Consensus 87 ~~~~~---------~~~g~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~~---t-G~~~~---l~~i~~l 143 (375)
T 2fnu_A 87 TANML---------LESGYTPVFAGIKNDGNIDELALEKLINE-------RTKAIVSVDY---A-GKSVE---VESVQKL 143 (375)
T ss_dssp HHHHH---------HHTTCEEEECCBCTTSSBCGGGSGGGCCT-------TEEEEEEECG---G-GCCCC---HHHHHHH
T ss_pred HHHHH---------HHCCCEEEEeccCCCCCCCHHHHHhhcCc-------CceEEEEeCC---c-CCccC---HHHHHHH
Confidence 54322 23488888888766667899999999976 7899888887 4 89999 9999999
Q ss_pred HHHcCCeEEEeCccCCh-hh----hcccCCeEEEecc--cccCcceeEEeec-Ccccc
Q psy5413 234 CQEHNIPVHMDGARLPL-AE----VCASVDTVMFCLS--KGLGAPVGSILAG-PEEFI 283 (285)
Q Consensus 234 a~~~gi~li~Dea~~~~-~~----~~~~~dv~~~s~s--K~l~~p~gg~~~~-~~~~i 283 (285)
|++||+++|+||+|+.. .. +....|+++.|++ |++++..|++++. +++++
T Consensus 144 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~~~g~g~~~~~~~~~~~ 201 (375)
T 2fnu_A 144 CKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELH 201 (375)
T ss_dssp HHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHH
T ss_pred HHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCccccCceEEEeCCHHHH
Confidence 99999999999998821 11 1112367788887 9997556777764 35553
No 169
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.84 E-value=4.1e-20 Score=172.23 Aligned_cols=189 Identities=18% Similarity=0.214 Sum_probs=140.1
Q ss_pred cHHHH-HHHHhccc-CCCCccCChhHHHHHHHHHhH----cCCC----cEEEcCChHHHHHHHHHHcccc----------
Q psy5413 80 TMEMK-NYMFNCEV-GDDVYLEDPTCKELQEKAAKL----AGKE----AAIFVPSGTMGNLIAIMTHCDR---------- 139 (285)
Q Consensus 80 ~~~v~-~a~~~~~~-~~~~y~~~~~~~~l~~~la~~----~g~~----~~~~~~~Gs~a~~~al~~~~~~---------- 139 (285)
.+.++ +++.+... +...|...+...++|+.++++ +|.+ .++|++|||+|+..++.++..+
T Consensus 108 ~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~ 187 (511)
T 3vp6_A 108 IIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM 187 (511)
T ss_dssp HHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCG
T ss_pred HHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCc
Confidence 44444 34443332 235677778888888766554 5765 4589999999999999887642
Q ss_pred ---CCCeEEecCCcceeeecccccccccccccccce---eeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 140 ---RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRV---LMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 140 ---~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
+++.|+++...|.+........ |. +++.++.++++.+|+++|+++|+++. ..+..+++|+++.+
T Consensus 188 ~~~~~~~v~~s~~~H~s~~~~~~~~---------g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~-~~g~~~~~vv~~~~ 257 (511)
T 3vp6_A 188 AAVPKLVLFTSEQSHYSIKKAGAAL---------GFGTDNVILIKCNERGKIIPADFEAKILEAK-QKGYVPFYVNATAG 257 (511)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHT---------TSCGGGEEEECBCTTSCBCHHHHHHHHHHHH-HTTCEEEEEEEEBS
T ss_pred ccCCCeEEEECCCchHHHHHHHHHc---------CCCCCcEEEeecCCCCccCHHHHHHHHHHHH-hcCCCcEEEEEecC
Confidence 3457888999998776644443 44 78888887788999999999997731 12234899999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh----------hcccCCeEEEecccccCcce--eEEeecCcc
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE----------VCASVDTVMFCLSKGLGAPV--GSILAGPEE 281 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~----------~~~~~dv~~~s~sK~l~~p~--gg~~~~~~~ 281 (285)
+|++ |.+.| |++|+++|++||+|+|+|++|++... -.+++|++++++||||++|. |++++.+++
T Consensus 258 ~~~~-G~vd~---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~ 333 (511)
T 3vp6_A 258 TTVY-GAFDP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKG 333 (511)
T ss_dssp CSSS-CCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTT
T ss_pred CCCC-ccccc---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHH
Confidence 9999 89988 99999999999999999999883211 12467999999999998853 445566655
Q ss_pred c
Q psy5413 282 F 282 (285)
Q Consensus 282 ~ 282 (285)
+
T Consensus 334 ~ 334 (511)
T 3vp6_A 334 I 334 (511)
T ss_dssp H
T ss_pred H
Confidence 4
No 170
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.84 E-value=3.2e-20 Score=173.02 Aligned_cols=157 Identities=20% Similarity=0.150 Sum_probs=125.1
Q ss_pred HHHHHHHHhHcCCC----cE--EEcCChHHHHHHHHHHccccCC--------CeEEecCCcceeeecccccccccccccc
Q psy5413 104 KELQEKAAKLAGKE----AA--IFVPSGTMGNLIAIMTHCDRRD--------SEIIVGDCSHIMLWEQGGASQTSVYSQI 169 (285)
Q Consensus 104 ~~l~~~la~~~g~~----~~--~~~~~Gs~a~~~al~~~~~~~g--------~~vi~~~~~h~~~~~~~~~~~~~~~~~~ 169 (285)
.++++.+++++|.+ .+ ++++||++|++.++++++. ++ ++|+++.++|........ .
T Consensus 142 ~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~-~g~~~~g~~~d~Vi~~~~~~~~~~~~~~---------~ 211 (514)
T 3mad_A 142 AEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRD-WARATKGITAPEAVVPVSAHAAFDKAAQ---------Y 211 (514)
T ss_dssp HHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHH-HHHHHHCCSSCEEEEETTSCTHHHHHHH---------H
T ss_pred HHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHH-HhhhhcCCCCCeEEEeCccchHHHHHHH---------H
Confidence 34556668888876 45 9999999999999999873 44 789999988876544322 3
Q ss_pred cceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC
Q psy5413 170 GRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP 249 (285)
Q Consensus 170 ~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~ 249 (285)
.|.+++.++.++++.+|+++|+++|++ ++++|++++++|++ |.+.| +++|+++|++||++||+||+|++
T Consensus 212 ~G~~v~~v~~~~~~~~d~~~Le~~i~~-------~~~~v~~~~~~npt-G~~~~---l~~i~~la~~~~i~livDea~~~ 280 (514)
T 3mad_A 212 FGIKLVRTPLDADYRADVAAMREAITP-------NTVVVAGSAPGYPH-GVVDP---IPEIAALAAEHGIGCHVDACLGG 280 (514)
T ss_dssp HTCEEEEECBCTTSCBCHHHHHHHCCT-------TEEEEEEETTCTTT-CCCCC---HHHHHHHHHHHTCEEEEECTTTT
T ss_pred cCCeeEEeeeCCCCCCCHHHHHHHhcc-------CCEEEEEeCCCCCC-ccccC---HHHHHHHHHHhCCeEEEeccccc
Confidence 488899999877888999999999987 79999999999999 89999 99999999999999999999883
Q ss_pred hh---------------hhcccCCeEEEecccccCc--ceeEEeecCcc
Q psy5413 250 LA---------------EVCASVDTVMFCLSKGLGA--PVGSILAGPEE 281 (285)
Q Consensus 250 ~~---------------~~~~~~dv~~~s~sK~l~~--p~gg~~~~~~~ 281 (285)
.. ....++|+++.+++|++++ +.|++++.++.
T Consensus 281 ~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~ 329 (514)
T 3mad_A 281 FILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPD 329 (514)
T ss_dssp TTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHH
T ss_pred ccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHH
Confidence 21 1234678999999999655 34444455543
No 171
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.84 E-value=1.6e-20 Score=169.98 Aligned_cols=161 Identities=17% Similarity=0.153 Sum_probs=130.2
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecc-cccccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQ-GGASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~-~~~~~~~~~~~~~g~~~~~~ 177 (285)
.++...++++.+++++|.+..+++++|++|+..+++ ++ ++|++|+++++.|..+... .... ...|.+++.+
T Consensus 65 ~~p~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~-l~-~~gd~Vl~~~~~y~~~~~~~~~~~------~~~G~~v~~v 136 (403)
T 3cog_A 65 GNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITH-LL-KAGDQIICMDDVYGGTNRYFRQVA------SEFGLKISFV 136 (403)
T ss_dssp -CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHT-TS-CTTCEEEEESSCCHHHHHHHHHTG------GGGTCEEEEE
T ss_pred CCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-Hh-CCCCEEEEeCCCcchHHHHHHHHH------HHcCCEEEEE
Confidence 468899999999999998888888999999999998 66 6899999988777543221 1112 3458888888
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcC-CeEEEeCccCChh---hh
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHN-IPVHMDGARLPLA---EV 253 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~g-i~li~Dea~~~~~---~~ 253 (285)
+.. |+++++++|++ ++++|++++|+||+ |.++| +++|+++|++|| +++|+||+|.... .+
T Consensus 137 ~~~-----d~~~l~~~i~~-------~t~~v~~~~p~npt-G~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~~~ 200 (403)
T 3cog_A 137 DCS-----KIKLLEAAITP-------ETKLVWIETPTNPT-QKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQRPL 200 (403)
T ss_dssp CTT-----SHHHHHHHCCT-------TEEEEEEESSCTTT-CCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCCTT
T ss_pred CCC-----CHHHHHHhcCc-------CCeEEEEECCCCCC-CeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCCcc
Confidence 763 89999999987 89999999999999 89999 999999999999 9999999988331 23
Q ss_pred cccCCeEEEecccccCcc---eeEEeec-Ccccc
Q psy5413 254 CASVDTVMFCLSKGLGAP---VGSILAG-PEEFI 283 (285)
Q Consensus 254 ~~~~dv~~~s~sK~l~~p---~gg~~~~-~~~~i 283 (285)
..+.|+++.|++|++++| ++|+++. +++++
T Consensus 201 ~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~ 234 (403)
T 3cog_A 201 ALGADISMYSATKYMNGHSDVVMGLVSVNCESLH 234 (403)
T ss_dssp TTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHH
T ss_pred ccCCeEEEEcChhhccCCCCCeEEEEEECcHHHH
Confidence 347899999999999984 3678776 45654
No 172
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.84 E-value=1.2e-20 Score=169.63 Aligned_cols=177 Identities=16% Similarity=0.146 Sum_probs=136.8
Q ss_pred cHHHHHHHHhcccCCCCcc-CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccc
Q psy5413 80 TMEMKNYMFNCEVGDDVYL-EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQG 158 (285)
Q Consensus 80 ~~~v~~a~~~~~~~~~~y~-~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~ 158 (285)
.+++.+++.+.... ..|. ..+...++++.++++++.+.+++++||++|++.+++++..++|++|+++.++|.......
T Consensus 35 ~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~ 113 (391)
T 3dr4_A 35 DGNERDYVLECMDT-TWISSVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSV 113 (391)
T ss_dssp CSSHHHHHHHHHHH-TCCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHH
T ss_pred CHHHHHHHHHHHHc-CCccCCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHH
Confidence 36777887765543 2344 678899999999999999999999999999999999982368999999988876554322
Q ss_pred ccccccccccccceeeeeeecC-CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc
Q psy5413 159 GASQTSVYSQIGRVLMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH 237 (285)
Q Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~ 237 (285)
...|.+++.++.+ +++.+|++++++++++ ++++|+++ |++ |.+.+ +++|+++|++|
T Consensus 114 ---------~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~v~~~---n~t-G~~~~---~~~i~~l~~~~ 170 (391)
T 3dr4_A 114 ---------TYCGATPVLVDNDPRTFNLDAAKLEALITP-------RTKAIMPV---HLY-GQICD---MDPILEVARRH 170 (391)
T ss_dssp ---------HHTTCEEEEECBCTTTCSBCGGGSGGGCCT-------TEEEECCB---CGG-GCCCC---HHHHHHHHHHT
T ss_pred ---------HHCCCEEEEEecCccccCcCHHHHHHhcCC-------CceEEEEE---CCC-CChhh---HHHHHHHHHHc
Confidence 2348888888876 4567899999999977 78888854 566 88888 99999999999
Q ss_pred CCeEEEeCccC-Chhh----hcccCCeEEEecc--cccCcceeEEeecCc
Q psy5413 238 NIPVHMDGARL-PLAE----VCASVDTVMFCLS--KGLGAPVGSILAGPE 280 (285)
Q Consensus 238 gi~li~Dea~~-~~~~----~~~~~dv~~~s~s--K~l~~p~gg~~~~~~ 280 (285)
|+++|+|++|+ +... .....|+.++|++ |+++++.||+++.++
T Consensus 171 ~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~ 220 (391)
T 3dr4_A 171 NLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTND 220 (391)
T ss_dssp TCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESC
T ss_pred CCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECC
Confidence 99999999988 2221 1122477777755 999887777776554
No 173
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.84 E-value=2.6e-20 Score=168.53 Aligned_cols=192 Identities=12% Similarity=0.107 Sum_probs=139.6
Q ss_pred eeeccCCcCCCcHHHHHHHHhcccCC---C----Cc--cCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHcc
Q psy5413 69 VDIRSDTISKPTMEMKNYMFNCEVGD---D----VY--LEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 69 ~~~~~~~~~~~~~~v~~a~~~~~~~~---~----~y--~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~ 137 (285)
+.|.....+.+++++.+++.++.... . .| +..+...++++.+++++|.+ .+++++||++++..++++++
T Consensus 30 ~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~ 109 (416)
T 1qz9_A 30 IYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAAL 109 (416)
T ss_dssp EECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHH
T ss_pred EeecCCCcCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhc
Confidence 44444444567889999988776531 1 11 11356789999999999975 57899999999998888765
Q ss_pred -c----cCCCe-EEecCCcceeeeccc-cccccccccccc--ceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEE
Q psy5413 138 -D----RRDSE-IIVGDCSHIMLWEQG-GASQTSVYSQIG--RVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLV 208 (285)
Q Consensus 138 -~----~~g~~-vi~~~~~h~~~~~~~-~~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v 208 (285)
. ++|++ |++++.+|.++.... .+. ... |.+++.++. +++|+++|++ ++++|
T Consensus 110 ~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~-------~~~l~~~i~~-------~~~~v 169 (416)
T 1qz9_A 110 RVQATRSPERRVIVTETSNFPTDLYIAEGLA------DMLQQGYTLRLVDS-------PEELPQAIDQ-------DTAVV 169 (416)
T ss_dssp HHHHHHSTTCCEEEEETTSCHHHHHHHHHHH------HHHCSSCEEEEESS-------GGGHHHHCST-------TEEEE
T ss_pred ccccccCCCCcEEEEcCCCCCchHHHHHHHH------HHhcCCceEEEeCc-------HHHHHHHhCC-------CceEE
Confidence 1 47876 555667776443211 111 122 667777764 6788888876 78999
Q ss_pred EEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh--hh-cccCCeEEEecccccC-ccee-EEeecCccc
Q psy5413 209 CVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLA--EV-CASVDTVMFCLSKGLG-APVG-SILAGPEEF 282 (285)
Q Consensus 209 ~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~--~~-~~~~dv~~~s~sK~l~-~p~g-g~~~~~~~~ 282 (285)
++++++|++ |.++| +++|+++|++||+++|+||+|+ +.. .+ ..+.|+++.|+||+++ ++.+ |+++.++++
T Consensus 170 ~~~~~~npt-G~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~ 245 (416)
T 1qz9_A 170 MLTHVNYKT-GYMHD---MQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQL 245 (416)
T ss_dssp EEESBCTTT-CBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTT
T ss_pred EEeccccCc-ccccC---HHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHH
Confidence 999999999 89999 9999999999999999999987 111 11 1357999999999985 4666 788887776
Q ss_pred cc
Q psy5413 283 IQ 284 (285)
Q Consensus 283 i~ 284 (285)
++
T Consensus 246 ~~ 247 (416)
T 1qz9_A 246 CD 247 (416)
T ss_dssp TT
T ss_pred Hh
Confidence 54
No 174
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.84 E-value=3.9e-20 Score=167.33 Aligned_cols=193 Identities=13% Similarity=0.075 Sum_probs=133.3
Q ss_pred eeeccCCcCCCcHHHHHHHHhcccCCC--------CccCC----hhHHHHHHHHHhHcCCCcE-EEcCChHHHHHHHHHH
Q psy5413 69 VDIRSDTISKPTMEMKNYMFNCEVGDD--------VYLED----PTCKELQEKAAKLAGKEAA-IFVPSGTMGNLIAIMT 135 (285)
Q Consensus 69 ~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~y~~~----~~~~~l~~~la~~~g~~~~-~~~~~Gs~a~~~al~~ 135 (285)
..+.+.++ .+|++.+++.++..... .|... .....+++.+++++|.+.. +++++|++|++.++++
T Consensus 34 ~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~ 111 (420)
T 3gbx_A 34 ELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTA 111 (420)
T ss_dssp ECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHH
T ss_pred eeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHH
Confidence 34445554 69999999988763211 11111 2233455788888998776 5578999999999998
Q ss_pred ccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccC
Q psy5413 136 HCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHN 215 (285)
Q Consensus 136 ~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n 215 (285)
++ ++||+|++..++|......+... .. ...+...+.++.+.++.+|+++|+++++++ ++++|++++|++
T Consensus 112 ~~-~~gd~v~~~~~~~~~~~~~~~~~---~~-~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~~ 180 (420)
T 3gbx_A 112 LL-QPGDTVLGMNLAQGGHLTHGSPV---NF-SGKLYNIVPYGIDESGKIDYDEMAKLAKEH------KPKMIIGGFSAY 180 (420)
T ss_dssp HC-CTTCEEEEEEEC---------------C-HHHHSEEEEEEECTTCSCCHHHHHHHHHHH------CCSEEEECCTTC
T ss_pred hc-CCCCEEEecchhhcceeccchhh---hh-cccceeEEeccCCccCCcCHHHHHHHHHhc------CCeEEEEecCcc
Confidence 87 69999999888876532111110 00 112334455565566779999999999862 589999988887
Q ss_pred CCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh------hhcccCCeEEEecccccCcceeEEeecCc
Q psy5413 216 YCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLA------EVCASVDTVMFCLSKGLGAPVGSILAGPE 280 (285)
Q Consensus 216 ~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~------~~~~~~dv~~~s~sK~l~~p~gg~~~~~~ 280 (285)
+ ...+ +++|+++|++||+++|+||+|. +.. ......|+++.|+||+++||.||++++++
T Consensus 181 ~---~~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gg~~~~~~ 246 (420)
T 3gbx_A 181 S---GVVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKG 246 (420)
T ss_dssp C---SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSCEEEEESS
T ss_pred C---CccC---HHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCceEEEEcC
Confidence 4 4677 9999999999999999999986 221 12235789999999999888899999877
No 175
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.83 E-value=1.3e-20 Score=175.06 Aligned_cols=194 Identities=10% Similarity=0.066 Sum_probs=141.5
Q ss_pred cHHHHHHHHhcccC-----CCCccCChhHHHHHHHHHhHcC--------CCcEEEcCChHHHHHHHHHHccccCCCeEEe
Q psy5413 80 TMEMKNYMFNCEVG-----DDVYLEDPTCKELQEKAAKLAG--------KEAAIFVPSGTMGNLIAIMTHCDRRDSEIIV 146 (285)
Q Consensus 80 ~~~v~~a~~~~~~~-----~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~ 146 (285)
++.+++++.+.+.. ...|.......++++.++++++ .+.+++++||++++..++.+++..+||.|++
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 187 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILV 187 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEE
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEE
Confidence 44455554443332 3467766777889999988863 3457999999999999999976358999999
Q ss_pred cCCcceeeecccccccccccccccceeeeeeecCCC--CCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCH
Q psy5413 147 GDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKD--GTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPM 224 (285)
Q Consensus 147 ~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~ 224 (285)
+.+.|....... ...|.+++.++.+++ +.+|+++|+++|++. ..++.++++|++++|+||| |.+++.
T Consensus 188 ~~p~y~~~~~~~---------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~~~~~k~ivl~~p~NPt-G~~~s~ 256 (500)
T 3tcm_A 188 PIPQYPLYSASI---------ALHGGALVPYYLNESTGWGLETSDVKKQLEDA-RSRGINVRALVVINPGNPT-GQVLAE 256 (500)
T ss_dssp EESCCTHHHHHH---------HHTTCEEEEEECBTTTTSBCCHHHHHHHHHHH-HHTTCEEEEEEEESSCTTT-CCCCCH
T ss_pred eCCCcHhHHHHH---------HHcCCEEEEEecccccCCCCCHHHHHHHHHHH-HhcCCCceEEEEECCCCCC-cccCCH
Confidence 988876544322 234788888886543 479999999999762 1123368999999999999 999999
Q ss_pred HHHHHHHHHHHHcCCeEEEeCccCChh-----------hh-------cccCC-eEEEeccccc-C--cceeEEeec---C
Q psy5413 225 QWLRELKARCQEHNIPVHMDGARLPLA-----------EV-------CASVD-TVMFCLSKGL-G--APVGSILAG---P 279 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~Dea~~~~~-----------~~-------~~~~d-v~~~s~sK~l-~--~p~gg~~~~---~ 279 (285)
+++++|+++|++||+++|+||+|..+. .+ ....+ +++.|+||++ | |.++|+++. +
T Consensus 257 ~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~ 336 (500)
T 3tcm_A 257 ENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS 336 (500)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC
T ss_pred HHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC
Confidence 999999999999999999999987211 01 11122 3378999998 3 467777765 6
Q ss_pred ccccc
Q psy5413 280 EEFIQ 284 (285)
Q Consensus 280 ~~~i~ 284 (285)
+++++
T Consensus 337 ~~~~~ 341 (500)
T 3tcm_A 337 APVRE 341 (500)
T ss_dssp TTHHH
T ss_pred HHHHH
Confidence 66653
No 176
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.83 E-value=1e-19 Score=168.39 Aligned_cols=200 Identities=14% Similarity=0.101 Sum_probs=141.3
Q ss_pred eeeeccCCcCCCcHHHHHHHHhcccCCC--------CccCChhHHHHH----HHHHhHcCCCc-----EEEcCChHHHHH
Q psy5413 68 TVDIRSDTISKPTMEMKNYMFNCEVGDD--------VYLEDPTCKELQ----EKAAKLAGKEA-----AIFVPSGTMGNL 130 (285)
Q Consensus 68 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~Gs~a~~ 130 (285)
.+.|..+. ...++++++++.+.+.+.. .|+..+...+++ +.+++++|.+. .+++.+|++++.
T Consensus 46 ~i~L~a~e-~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~ 124 (483)
T 1rv3_A 46 GLELIASE-NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANF 124 (483)
T ss_dssp SEECCTTC-CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHH
T ss_pred CeEEEcCC-CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcHHHHH
Confidence 45554333 2368899999988765422 233334444555 88888999873 378888999999
Q ss_pred HHHHHccccCCCeEEecCCcceeeecccccccccccccccc--eeeeeeecC-CCCCCCHHHHHHHhcccccccCCceEE
Q psy5413 131 IAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGR--VLMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 131 ~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
+++.+++ ++||+|++++..|......+........ ...| ...+.++.+ +++.+|+++|++++++. ++++
T Consensus 125 ~~~~all-~pGD~Vl~~~~~~~~~~~~~~~~~~~~v-~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~------~tkl 196 (483)
T 1rv3_A 125 AVYTALV-EPHGRIMGLDLPDGGHLTHGFMTDKKKI-SATSIFFESMAYKVNPDTGYIDYDRLEENARLF------HPKL 196 (483)
T ss_dssp HHHHHHT-CTTCEEEEECGGGTCCGGGCCBCSSCBC-SHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH------CCSE
T ss_pred HHHHHhc-CCCCEEEEecCccCcCcchhhhhcccCc-ccccceEEEEECccccCCCcCCHHHHHHHHhhc------CCcE
Confidence 9898876 6999999988777554321100000000 1123 344444434 56789999999999832 7899
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chhhh------cccCCeEEEecccccCcceeEEeecCc
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLAEV------CASVDTVMFCLSKGLGAPVGSILAGPE 280 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~~~------~~~~dv~~~s~sK~l~~p~gg~~~~~~ 280 (285)
|++ +++|++ .++| +++|+++|++||++||+|++|. ++... ..++|+++.|+||+|+||+||+++.++
T Consensus 197 Ii~-~~sn~~--~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~GprgG~i~~~~ 270 (483)
T 1rv3_A 197 IIA-GTSCYS--RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRR 270 (483)
T ss_dssp EEE-CCSSCC--SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSCEEEEEEC
T ss_pred EEE-eCCcCC--CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCCceEEEEcc
Confidence 999 888884 7888 9999999999999999999987 22211 127899999999999999999999887
Q ss_pred cc
Q psy5413 281 EF 282 (285)
Q Consensus 281 ~~ 282 (285)
++
T Consensus 271 ~~ 272 (483)
T 1rv3_A 271 GV 272 (483)
T ss_dssp SB
T ss_pred hh
Confidence 54
No 177
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.83 E-value=4e-20 Score=166.12 Aligned_cols=162 Identities=17% Similarity=0.167 Sum_probs=129.2
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccc-ccccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQG-GASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~~~~~~~g~~~~~~ 177 (285)
+++...++++.++++++.+..+++++|++|+..++++++ ++|++|++..+.|..+.... ... ...|.+++.+
T Consensus 50 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~------~~~g~~~~~~ 122 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFL-KPGDLLVAPHDCYGGSYRLFDSLA------KRGCYRVLFV 122 (386)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHHHH------TTTSCEEEEE
T ss_pred CCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEecCCcHhHHHHHHHHH------HhcCCEEEEe
Confidence 467789999999999998877888999999999999876 58999999887775432211 111 2347777777
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh---hhc
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA---EVC 254 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~---~~~ 254 (285)
+.. |++++++++++ ++++|++++++|++ |.+++ +++|+++|++||+++|+||+|+... ...
T Consensus 123 ~~~-----d~~~l~~~i~~-------~~~~v~~~~~~npt-G~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~ 186 (386)
T 1cs1_A 123 DQG-----DEQALRAALAE-------KPKLVLVESPSNPL-LRVVD---IAKICHLAREVGAVSVVDNTFLSPALQNPLA 186 (386)
T ss_dssp CTT-----CHHHHHHHHHT-------CCSEEEEECSCTTT-CCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCCGGG
T ss_pred CCC-----CHHHHHHhhcc-------CCcEEEEeCCCCCC-CcccC---HHHHHHHHHHcCCEEEEECCCcccccCCccc
Confidence 752 89999999987 78999999999999 89998 9999999999999999999998322 223
Q ss_pred ccCCeEEEecccccCcc---eeEEeecCc-ccc
Q psy5413 255 ASVDTVMFCLSKGLGAP---VGSILAGPE-EFI 283 (285)
Q Consensus 255 ~~~dv~~~s~sK~l~~p---~gg~~~~~~-~~i 283 (285)
.+.|+++.|+||++++| +||+++.++ +++
T Consensus 187 ~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~ 219 (386)
T 1cs1_A 187 LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVV 219 (386)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHH
T ss_pred cCceEEEEcCcccccCCCCceeEEEEeCcHHHH
Confidence 46789999999999874 347777664 554
No 178
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.83 E-value=5.2e-20 Score=165.91 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=141.5
Q ss_pred CeeeeeccCCcCCCcHHHHHHHHhcccC--CCCcc------CChhHHHHH----HHHHhHcCCCcE-EEcCChHHHHHHH
Q psy5413 66 IRTVDIRSDTISKPTMEMKNYMFNCEVG--DDVYL------EDPTCKELQ----EKAAKLAGKEAA-IFVPSGTMGNLIA 132 (285)
Q Consensus 66 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~--~~~y~------~~~~~~~l~----~~la~~~g~~~~-~~~~~Gs~a~~~a 132 (285)
+++++|..+.... +|++.+++.++... ...|. ..+....++ +.+++++|.+.. +++++|++|+..+
T Consensus 23 ~~~i~~~~~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~ 101 (407)
T 2dkj_A 23 REGLELIASENFV-SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAV 101 (407)
T ss_dssp HTSEECCTTCCCC-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHH
T ss_pred hcceeeccCCCCC-CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHH
Confidence 3567777665444 89999999887642 22232 223222333 488999998876 7788999999999
Q ss_pred HHHccccCCCeEEecCCcceeeecccccccccccccccce--eeeeeecC-CCCCCCHHHHHHHhcccccccCCceEEEE
Q psy5413 133 IMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRV--LMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSLVC 209 (285)
Q Consensus 133 l~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 209 (285)
+++++ ++|++|+++.++|.......... ...|. ..+.++.+ .++.+|++++++++++. ++++|+
T Consensus 102 ~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~~v~ 168 (407)
T 2dkj_A 102 YMALM-EPGDTLMGMDLAAGGHLTHGSRV------NFSGKLYKVVSYGVRPDTELIDLEEVRRLALEH------RPKVIV 168 (407)
T ss_dssp HHHHC-CTTCEEEEECGGGTCCGGGTCTT------SHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHH------CCSEEE
T ss_pred HHHhc-CCCCEEEEecccccCccchHHHH------HhcCceEEEEecCCCcccCccCHHHHHHHHhhc------CCeEEE
Confidence 99986 68999999888876552111111 12244 33344333 35678999999999742 678999
Q ss_pred EecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC-hhhh------cccCCeEEEecccccCcceeEEeecC-cc
Q psy5413 210 VENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP-LAEV------CASVDTVMFCLSKGLGAPVGSILAGP-EE 281 (285)
Q Consensus 210 i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~-~~~~------~~~~dv~~~s~sK~l~~p~gg~~~~~-~~ 281 (285)
+++|+|+ .+.+ +++|+++|++||+++|+||+|+. .... ....|+++.|+||+++|+++|+++++ ++
T Consensus 169 ~~~p~~~---~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~~~~ 242 (407)
T 2dkj_A 169 AGASAYP---RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSNDPE 242 (407)
T ss_dssp ECCSSCC---SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEEEEESCHH
T ss_pred EeccccC---CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceEEEECCHH
Confidence 9778874 6677 99999999999999999999883 3211 12478889999999998888999887 67
Q ss_pred ccc
Q psy5413 282 FIQ 284 (285)
Q Consensus 282 ~i~ 284 (285)
+++
T Consensus 243 ~~~ 245 (407)
T 2dkj_A 243 LGK 245 (407)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 179
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.83 E-value=6.1e-20 Score=165.43 Aligned_cols=197 Identities=12% Similarity=0.021 Sum_probs=143.4
Q ss_pred eeeeeccCCc-CC-----CcHHHHHHHHhccc--CCCCccCChhHHHHHHHHHhHcC--------CCcEEE--cCChHHH
Q psy5413 67 RTVDIRSDTI-SK-----PTMEMKNYMFNCEV--GDDVYLEDPTCKELQEKAAKLAG--------KEAAIF--VPSGTMG 128 (285)
Q Consensus 67 ~~~~~~~~~~-~~-----~~~~v~~a~~~~~~--~~~~y~~~~~~~~l~~~la~~~g--------~~~~~~--~~~Gs~a 128 (285)
.+++|..+.+ .. ..+++.+++.+... +...|.......++++.++++++ .+.+++ ++||++|
T Consensus 29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~a 108 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGS 108 (401)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHH
T ss_pred CceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHH
Confidence 4577777665 22 23467887776544 34567655668899999999875 344555 8999999
Q ss_pred HHHHHHHcc--ccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC--CCCCCCHHHHHHHhcccccccCCc
Q psy5413 129 NLIAIMTHC--DRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ--KDGTFDLDEMEAKFSTADNIHCAS 204 (285)
Q Consensus 129 ~~~al~~~~--~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~ 204 (285)
+..+++++. .++||+|+++.++|....... ...|.+++.++.. .++.+|++++++.+++ ..++
T Consensus 109 l~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~ 175 (401)
T 7aat_A 109 LRVGANFLQRFFKFSRDVYLPKPSWGNHTPIF---------RDAGLQLQAYRYYDPKTCSLDFTGAMEDISK----IPEK 175 (401)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESCCTTHHHHH---------HHTTCEEEEEECEETTTTEECHHHHHHHHTT----SCTT
T ss_pred HHHHHHHHHHhccCCCEEEEcCCCchhHHHHH---------HHcCCeeEeeeeeccccCccCHHHHHHHHHh----CCCC
Confidence 998887653 258999999888775543322 2347788888753 3567899988888865 2337
Q ss_pred eEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh---------h----ccc-CCeEEEecccccCc
Q psy5413 205 TSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE---------V----CAS-VDTVMFCLSKGLGA 270 (285)
Q Consensus 205 ~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~---------~----~~~-~dv~~~s~sK~l~~ 270 (285)
+++|++++|+||| |.+++.+++++|+++|++||+++|+||+|..+.. + ... ..+++.|+||.++.
T Consensus 176 ~~~v~i~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 254 (401)
T 7aat_A 176 SIILLHACAHNPT-GVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGL 254 (401)
T ss_dssp CEEEEESSSCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCC
T ss_pred cEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccccc
Confidence 8999999999999 8999999999999999999999999999872210 1 112 23559999999875
Q ss_pred --ceeEEee
Q psy5413 271 --PVGSILA 277 (285)
Q Consensus 271 --p~gg~~~ 277 (285)
.+.|+++
T Consensus 255 ~G~RiG~l~ 263 (401)
T 7aat_A 255 YGERAGAFT 263 (401)
T ss_dssp GGGCEEEEE
T ss_pred ccCceEEEE
Confidence 4455644
No 180
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.83 E-value=4.9e-20 Score=167.30 Aligned_cols=216 Identities=13% Similarity=0.057 Sum_probs=140.9
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCC----CCccCChhHHHHHHHHHhHc-C-C-CcEEEcCChHHHHHHHH
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGD----DVYLEDPTCKELQEKAAKLA-G-K-EAAIFVPSGTMGNLIAI 133 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~----~~y~~~~~~~~l~~~la~~~-g-~-~~~~~~~~Gs~a~~~al 133 (285)
|+.++||.++. .++++|++.+++.++.... ..|...+...+|++.|++++ + . +.+++++||++|++.++
T Consensus 40 g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~ 119 (426)
T 1sff_A 40 GREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAV 119 (426)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHH
Confidence 56788887654 3447899999998876531 13556778999999999999 5 4 55799999999999999
Q ss_pred H---HccccCCCeEEec-CCcceeeeccccccc-ccccccccce---eeeeeecCC-----CCCCCHHHHHHHhcccccc
Q psy5413 134 M---THCDRRDSEIIVG-DCSHIMLWEQGGASQ-TSVYSQIGRV---LMRGVTNQK-----DGTFDLDEMEAKFSTADNI 200 (285)
Q Consensus 134 ~---~~~~~~g~~vi~~-~~~h~~~~~~~~~~~-~~~~~~~~g~---~~~~~~~~~-----~~~~d~~~l~~~i~~~~~~ 200 (285)
+ .+. +++ +|++. ..+|.+......... ...|...++. .++.++.+. ++.+|+++|++++++..
T Consensus 120 ~~a~~~~-~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-- 195 (426)
T 1sff_A 120 KIARAAT-KRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-- 195 (426)
T ss_dssp HHHHHHH-TCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC--
T ss_pred HHHHHhh-CCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc--
Confidence 8 433 455 56664 556655432211110 0011111121 133444422 12368999999986310
Q ss_pred cCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcccCC--eEEEecccccCc-ce
Q psy5413 201 HCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCASVD--TVMFCLSKGLGA-PV 272 (285)
Q Consensus 201 ~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~~~d--v~~~s~sK~l~~-p~ 272 (285)
+..++++|++++.++.+|..+++.+++++|+++|++||++||+||+|+++.. ..+..+ .-+.|+||++++ .+
T Consensus 196 ~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~Glr 275 (426)
T 1sff_A 196 APEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFP 275 (426)
T ss_dssp CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTSSC
T ss_pred CCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccCCCc
Confidence 1127899999874444733889999999999999999999999999984321 111111 125588999986 33
Q ss_pred eEEeecCccccc
Q psy5413 273 GSILAGPEEFIQ 284 (285)
Q Consensus 273 gg~~~~~~~~i~ 284 (285)
.|++++++++++
T Consensus 276 iG~~~~~~~~~~ 287 (426)
T 1sff_A 276 LAGVTGRAEVMD 287 (426)
T ss_dssp CEEEEEEHHHHT
T ss_pred eEEEEEcHHHHh
Confidence 377777777654
No 181
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.83 E-value=7.6e-20 Score=164.73 Aligned_cols=197 Identities=17% Similarity=0.177 Sum_probs=141.0
Q ss_pred eeeeeccCCcCCCcHHHHHHHHhccc-CC-CC------ccCChhHHHHH----HHHHhHcCCCcE-EEcCChHHHHHHHH
Q psy5413 67 RTVDIRSDTISKPTMEMKNYMFNCEV-GD-DV------YLEDPTCKELQ----EKAAKLAGKEAA-IFVPSGTMGNLIAI 133 (285)
Q Consensus 67 ~~~~~~~~~~~~~~~~v~~a~~~~~~-~~-~~------y~~~~~~~~l~----~~la~~~g~~~~-~~~~~Gs~a~~~al 133 (285)
.++++.+.++. +|++++++.++.. .. .. |...+...+++ +.+++++|.+.. +++++|++|+..++
T Consensus 25 ~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~ 102 (405)
T 2vi8_A 25 KIELIASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVY 102 (405)
T ss_dssp SEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHH
T ss_pred ceeeccCcccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHH
Confidence 46777777665 8999999988764 21 11 22234455555 699999998876 55788999999999
Q ss_pred HHccccCCCeEEecCCcceeeecccccccccccccccce--eeeeeecC-CCCCCCHHHHHHHhcccccccCCceEEEEE
Q psy5413 134 MTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRV--LMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSLVCV 210 (285)
Q Consensus 134 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i 210 (285)
++++ ++|++|+++.++|.......... ...|. +++.++.+ .++.+|++++++++++. ++++|++
T Consensus 103 ~~~~-~~gd~Vl~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~~v~~ 169 (405)
T 2vi8_A 103 FTVL-EHGDTVLGMNLSHGGHLTHGSPV------NFSGVQYNFVAYGVDPETHVIDYDDVREKARLH------RPKLIVA 169 (405)
T ss_dssp HHHC-CTTCEEEEECGGGTCCTTTTCTT------SHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH------CCSEEEE
T ss_pred HHhc-CCCCEEEEecccccchhcccchh------hhccceeEEEecccccccCCcCHHHHHHHHHhc------CCeEEEE
Confidence 9986 68999999988886654211110 11133 56666653 45678999999999752 5678887
Q ss_pred ecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh--hhc----ccCCeEEEecccccCcceeEEeecCcccc
Q psy5413 211 ENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLA--EVC----ASVDTVMFCLSKGLGAPVGSILAGPEEFI 283 (285)
Q Consensus 211 ~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~--~~~----~~~dv~~~s~sK~l~~p~gg~~~~~~~~i 283 (285)
++ ++. |...+ +++|+++|++||+++|+||+|+ +.. ... ...|+++.|+||++++|.||+++++++++
T Consensus 170 ~~-~~~--~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~~~~ 243 (405)
T 2vi8_A 170 AA-AAY--PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQEQFA 243 (405)
T ss_dssp CC-SSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEEEECHHHH
T ss_pred eC-CCC--CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCCeEEEEcHHHH
Confidence 43 443 56667 9999999999999999999988 111 111 25788899999999977789998887765
Q ss_pred c
Q psy5413 284 Q 284 (285)
Q Consensus 284 ~ 284 (285)
+
T Consensus 244 ~ 244 (405)
T 2vi8_A 244 K 244 (405)
T ss_dssp H
T ss_pred H
Confidence 3
No 182
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.83 E-value=6.6e-20 Score=170.96 Aligned_cols=173 Identities=22% Similarity=0.269 Sum_probs=128.6
Q ss_pred CccCChhH----HHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccc-------cCCC------eEEecCCcceeeec
Q psy5413 96 VYLEDPTC----KELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCD-------RRDS------EIIVGDCSHIMLWE 156 (285)
Q Consensus 96 ~y~~~~~~----~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~-------~~g~------~vi~~~~~h~~~~~ 156 (285)
.|...+.. .++++.+++++|.+ .++|++|||+|+..++.++.. .+|+ .|++++..|.++..
T Consensus 139 ~~~~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~ 218 (515)
T 2jis_A 139 TYEIAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQK 218 (515)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHH
T ss_pred chhhchHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHH
Confidence 45555554 45556688888875 569999999999999998742 2464 68888888877665
Q ss_pred ccccccccccccccce-eeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHH
Q psy5413 157 QGGASQTSVYSQIGRV-LMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQ 235 (285)
Q Consensus 157 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~ 235 (285)
..... . .|. +++.+|.++++.+|+++|+++|+++. ..+.++++|++++++|++ |.+.| +++|+++|+
T Consensus 219 ~~~~~------g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~-~~g~~~~~Vv~~~~~n~t-G~i~~---l~~I~~la~ 286 (515)
T 2jis_A 219 GAAFL------G-LGTDSVRVVKADERGKMVPEDLERQIGMAE-AEGAVPFLVSATSGTTVL-GAFDP---LEAIADVCQ 286 (515)
T ss_dssp HHHHT------T-SCGGGEEEECBCTTSCBCHHHHHHHHHHHH-HTTCEEEEEEEEBSCTTT-CCBCC---HHHHHHHHH
T ss_pred HHHHc------C-CCCCcEEEEecCCCCcCCHHHHHHHHHHHH-hCCCCcEEEEEeCCCCCC-CCccC---HHHHHHHHH
Confidence 33332 1 122 78888887788899999999997621 123358999999999999 89999 999999999
Q ss_pred HcCCeEEEeCccCChhh--------h--cccCCeEEEecccccCccee-EEe-ecCc
Q psy5413 236 EHNIPVHMDGARLPLAE--------V--CASVDTVMFCLSKGLGAPVG-SIL-AGPE 280 (285)
Q Consensus 236 ~~gi~li~Dea~~~~~~--------~--~~~~dv~~~s~sK~l~~p~g-g~~-~~~~ 280 (285)
+||+|+|+|++|+.... + .+++|++++++|||+++|.| |++ +.++
T Consensus 287 ~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~ 343 (515)
T 2jis_A 287 RHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDT 343 (515)
T ss_dssp HHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCC
T ss_pred HcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeCh
Confidence 99999999999882211 1 24789999999999988642 444 4444
No 183
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.83 E-value=4.1e-20 Score=170.65 Aligned_cols=195 Identities=13% Similarity=0.105 Sum_probs=126.4
Q ss_pred ccCCcCCCcHHHHHHHHhcccCCC--------CccCChhHHHHH----HHHHhHcCCCc----E-EEcCChHHHHHHHHH
Q psy5413 72 RSDTISKPTMEMKNYMFNCEVGDD--------VYLEDPTCKELQ----EKAAKLAGKEA----A-IFVPSGTMGNLIAIM 134 (285)
Q Consensus 72 ~~~~~~~~~~~v~~a~~~~~~~~~--------~y~~~~~~~~l~----~~la~~~g~~~----~-~~~~~Gs~a~~~al~ 134 (285)
.++++ .+|+|++|+.+.+.+.. .|+..+...+++ +.+++++|.+. + +++.||++|+..++.
T Consensus 61 as~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~ 138 (490)
T 2a7v_A 61 ASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYT 138 (490)
T ss_dssp TTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHH
T ss_pred CCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHH
Confidence 34444 69999999988765322 233334344555 89999999986 3 567799999999999
Q ss_pred HccccCCCeEEecCCcceeeecccccccccccccccce--eeeeeecC-CCCCCCHHHHHHHhcccccccCCceEEEEEe
Q psy5413 135 THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRV--LMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSLVCVE 211 (285)
Q Consensus 135 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~ 211 (285)
+++ ++||+|++.+..|......+........ ...|. .++.++.+ +++.+|+++|++++.++ ++++|+++
T Consensus 139 al~-~pGD~Vl~~~~~h~g~l~h~~~~~~~~i-~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~------~~klIi~~ 210 (490)
T 2a7v_A 139 ALL-QPHDRIMGLDLPDGGHLTHGYMSDVKRI-SATSIFFESMPYKLNPKTGLIDYNQLALTARLF------RPRLIIAG 210 (490)
T ss_dssp HHC-CSCEECCC--------------------------------CCBCTTTCSBCHHHHHHHHHHH------CCSEEEEC
T ss_pred HHc-CCCCEecccCccccccccchhhhcchhH-HHcCCeEEEEecccccccCCcCHHHHHHHHhhc------CCcEEEEc
Confidence 987 6999999887766432110000000000 11233 33344433 46789999999999752 57888887
Q ss_pred cccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh------hhcccCCeEEEecccccCcceeEEeecCccc
Q psy5413 212 NTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLA------EVCASVDTVMFCLSKGLGAPVGSILAGPEEF 282 (285)
Q Consensus 212 ~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~------~~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~ 282 (285)
.+++ +...| +++|+++|++||++||+|++|. ++. ....++|++++|+||+|+||.||++++++++
T Consensus 211 ~s~~---~~~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~GG~i~~~~~~ 282 (490)
T 2a7v_A 211 TSAY---ARLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGV 282 (490)
T ss_dssp CSSC---CSCCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCSCEEEEEECSE
T ss_pred CCCC---CCccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccccchheeeccch
Confidence 7776 45677 9999999999999999999986 211 1124789999999999999999999987753
No 184
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.83 E-value=1.8e-19 Score=163.20 Aligned_cols=183 Identities=13% Similarity=0.078 Sum_probs=125.5
Q ss_pred CcHHHHHHHHhcccCCC--------CccCC---hhHHHH-HHHHHhHcCCCcE-EEcCChHHHHHHHHHHccccCCCeEE
Q psy5413 79 PTMEMKNYMFNCEVGDD--------VYLED---PTCKEL-QEKAAKLAGKEAA-IFVPSGTMGNLIAIMTHCDRRDSEII 145 (285)
Q Consensus 79 ~~~~v~~a~~~~~~~~~--------~y~~~---~~~~~l-~~~la~~~g~~~~-~~~~~Gs~a~~~al~~~~~~~g~~vi 145 (285)
.+|++.+++.++..... .|... +...++ ++.+++++|.+.. +++++|++|++.++++++ ++||+|+
T Consensus 44 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~-~~gd~Vi 122 (425)
T 3ecd_A 44 VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALA-KPGDTVL 122 (425)
T ss_dssp CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHC-CTTCEEE
T ss_pred CCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCceeecCchHHHHHHHHHHcc-CCCCEEE
Confidence 39999999998764211 11111 123444 4778888999887 559999999999999886 6899999
Q ss_pred ecCCcceeeecccccccccccccccce--eeeeeecC-CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeC
Q psy5413 146 VGDCSHIMLWEQGGASQTSVYSQIGRV--LMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVL 222 (285)
Q Consensus 146 ~~~~~h~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~ 222 (285)
+..++|......+... ...+. +.+.++.+ +++.+|+++|++++++. ++++|++++|+| |...
T Consensus 123 ~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~~---~~~~ 187 (425)
T 3ecd_A 123 GMSLDAGGHLTHGAKP------ALSGKWFNALQYGVSRDTMLIDYDQVEALAQQH------KPSLIIAGFSAY---PRKL 187 (425)
T ss_dssp EECC------------------------CEEEEECCCTTTSSCCHHHHHHHHHHH------CCSEEEEECSCC---CSCC
T ss_pred Ecccccccceecchhh------hhcccceeeeecCCCcccCccCHHHHHHHHhhc------CCcEEEEccccC---CCcC
Confidence 9888875521111111 11133 44455543 34678999999999742 689999998887 4566
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccC-Chh------hhcccCCeEEEecccccCcceeEEeecCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARL-PLA------EVCASVDTVMFCLSKGLGAPVGSILAGPE 280 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~-~~~------~~~~~~dv~~~s~sK~l~~p~gg~~~~~~ 280 (285)
+ +++|+++|++||++||+||+|. +.. ......|+++.|+||+++||+||++++++
T Consensus 188 ~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~g~~~~~~ 249 (425)
T 3ecd_A 188 D---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTND 249 (425)
T ss_dssp C---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCSCEEEEESC
T ss_pred C---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCCcEEEEeCC
Confidence 7 8999999999999999999965 211 12234789999999999888899998874
No 185
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.82 E-value=4.6e-20 Score=166.25 Aligned_cols=182 Identities=13% Similarity=0.127 Sum_probs=138.4
Q ss_pred cHHHHHHHHhcccCCCCccC--ChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc-cccCCCeEEecCCcceeeec
Q psy5413 80 TMEMKNYMFNCEVGDDVYLE--DPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH-CDRRDSEIIVGDCSHIMLWE 156 (285)
Q Consensus 80 ~~~v~~a~~~~~~~~~~y~~--~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~-~~~~g~~vi~~~~~h~~~~~ 156 (285)
.+++.+++.+.... .|.. .+...++++.+++++|.+.+++++||++|+..+++++ + ++|++|+++.+.|.....
T Consensus 11 ~~~v~~a~~~~~~~--~~~~~~g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~-~~gd~Vl~~~~~~~~~~~ 87 (394)
T 1o69_A 11 GGNELKYIEEVFKS--NYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGV-KQDDIVLASSFTFIASVA 87 (394)
T ss_dssp -CCHHHHHHHHHHH--TTTSCTTHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTC-CTTCEEEEESSSCGGGTH
T ss_pred CHHHHHHHHHHHHc--CCccCCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCC-CCCCEEEECCCccHHHHH
Confidence 45677777665542 2332 4669999999999999998999999999999999998 5 689999999888866543
Q ss_pred ccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHH
Q psy5413 157 QGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQE 236 (285)
Q Consensus 157 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~ 236 (285)
.. ...|.+++.++.++++.+|++++++++++. .+++++|++++++ |...+ +++|.++|++
T Consensus 88 ~~---------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----~~~~~~v~~~~~~----G~~~~---l~~i~~l~~~ 147 (394)
T 1o69_A 88 PI---------CYLKAKPVFIDCDETYNIDVDLLKLAIKEC----EKKPKALILTHLY----GNAAK---MDEIVEICKE 147 (394)
T ss_dssp HH---------HHTTCEEEEECBCTTSSBCHHHHHHHHHHC----SSCCCEEEEECGG----GCCCC---HHHHHHHHHH
T ss_pred HH---------HHcCCEEEEEEeCCCCCcCHHHHHHHHhcc----cCCceEEEEECCC----CChhh---HHHHHHHHHH
Confidence 22 234888888887667789999999999752 1257899998754 77777 9999999999
Q ss_pred cCCeEEEeCccC-Chhhhc------ccCCeEEEecccccCcceeEEeecC-ccccc
Q psy5413 237 HNIPVHMDGARL-PLAEVC------ASVDTVMFCLSKGLGAPVGSILAGP-EEFIQ 284 (285)
Q Consensus 237 ~gi~li~Dea~~-~~~~~~------~~~dv~~~s~sK~l~~p~gg~~~~~-~~~i~ 284 (285)
+|+++|+||+|+ +..... ..+|+++++.+|++++..+|+++.+ +++++
T Consensus 148 ~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~ 203 (394)
T 1o69_A 148 NDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIE 203 (394)
T ss_dssp TTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHH
T ss_pred cCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHH
Confidence 999999999998 432211 1334445566899988778888884 66543
No 186
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.82 E-value=2.6e-20 Score=163.63 Aligned_cols=156 Identities=17% Similarity=0.132 Sum_probs=125.1
Q ss_pred HHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccc-ccccccccccccceeeeeeecCCCC
Q psy5413 105 ELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQG-GASQTSVYSQIGRVLMRGVTNQKDG 183 (285)
Q Consensus 105 ~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 183 (285)
++++.+++++|.+..+++++|++|+..+++++. ++|++|+++.+.|..+.... .+. ...|.+++.++.
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~---- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFL-KAGDHLISDDCLYGCTHALFEHQL------RKFGVEVDFIDM---- 70 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEESCCCHHHHHHHHTHH------HHTTCEEEEECT----
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCcchHHHHHHHHH------HhcCCEEEEeCC----
Confidence 689999999999888999999999999999876 58999999888776543211 111 234777777765
Q ss_pred CCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHH-cCCeEEEeCccCChh---hhcccCCe
Q psy5413 184 TFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQE-HNIPVHMDGARLPLA---EVCASVDT 259 (285)
Q Consensus 184 ~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~-~gi~li~Dea~~~~~---~~~~~~dv 259 (285)
.|++++++++++ ++++|++++++||+ |.++| +++|.++|++ ||+++|+||+|+... ....+.|+
T Consensus 71 -~d~~~l~~~i~~-------~~~~v~~~~~~npt-G~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~ 138 (331)
T 1pff_A 71 -AVPGNIEKHLKP-------NTRIVYFETPANPT-LKVID---IEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDI 138 (331)
T ss_dssp -TSTTHHHHTCCT-------TEEEEEEESSCTTT-CCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSE
T ss_pred -CCHHHHHHhhcC-------CCeEEEEECCCCCc-CcccC---HHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcE
Confidence 378899999976 79999999999999 89999 9999999999 999999999998211 22346789
Q ss_pred EEEecccccCcce---eEEeecCc-ccc
Q psy5413 260 VMFCLSKGLGAPV---GSILAGPE-EFI 283 (285)
Q Consensus 260 ~~~s~sK~l~~p~---gg~~~~~~-~~i 283 (285)
++.|+||++++|. +|+++.++ +++
T Consensus 139 ~~~s~~K~~~~~~~r~~G~~~~~~~~~~ 166 (331)
T 1pff_A 139 VVHSATKYINGHTDVVAGLVCSRADIIA 166 (331)
T ss_dssp EEEETTTTTSSSSSCCCEEEEECHHHHH
T ss_pred EEEECccccCCCCCceEEEEEeCcHHHH
Confidence 9999999998742 67887776 654
No 187
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.82 E-value=1.2e-19 Score=164.26 Aligned_cols=198 Identities=15% Similarity=0.047 Sum_probs=143.3
Q ss_pred CCeeeeeccCCc---C---CCcHHHHHHHHh-cccC--CCCccCChhHHHHHHHHHhHc-C-------CCcEEE--cCCh
Q psy5413 65 NIRTVDIRSDTI---S---KPTMEMKNYMFN-CEVG--DDVYLEDPTCKELQEKAAKLA-G-------KEAAIF--VPSG 125 (285)
Q Consensus 65 ~~~~~~~~~~~~---~---~~~~~v~~a~~~-~~~~--~~~y~~~~~~~~l~~~la~~~-g-------~~~~~~--~~~G 125 (285)
++.+++|..+.+ . .+.+.+.+++.+ .... ...|+......++++.+++++ + .+.+++ +++|
T Consensus 28 ~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~ 107 (412)
T 1yaa_A 28 RATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSG 107 (412)
T ss_dssp CSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHH
T ss_pred CCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccch
Confidence 346788887765 2 356899999988 6542 235665666889999999997 3 356788 9999
Q ss_pred HHHHHHHHH--HccccCCCeEEecCCcceeeecccccccccccccccceeeeeeec-C-CCCCCCHHHHHHHhccccccc
Q psy5413 126 TMGNLIAIM--THCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN-Q-KDGTFDLDEMEAKFSTADNIH 201 (285)
Q Consensus 126 s~a~~~al~--~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~d~~~l~~~i~~~~~~~ 201 (285)
++|++.+++ ..+ .+|++|+++.++|...... . ...|.+++.++. + +++.+|++++++++++.
T Consensus 108 ~~a~~~~~~~~~~~-~~gd~Vl~~~p~~~~~~~~---~------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~---- 173 (412)
T 1yaa_A 108 TGALHISAKFFSKF-FPDKLVYLSKPTWANHMAI---F------ENQGLKTATYPYWANETKSLDLNGFLNAIQKA---- 173 (412)
T ss_dssp HHHHHHHHHHHHHH-CTTCCEEEEESCCTTHHHH---H------HTTTCCEEEEECEETTTTEECHHHHHHHHHHS----
T ss_pred HhHHHHHHHHHHHh-CCCCEEEEeCCCCccHHHH---H------HHcCceEEEEeeecCCCCccCHHHHHHHHHhC----
Confidence 999998843 333 4899999987776543321 1 234778888876 3 35668999999999762
Q ss_pred CCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh-------h--hh---c-ccC----CeEEEec
Q psy5413 202 CASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL-------A--EV---C-ASV----DTVMFCL 264 (285)
Q Consensus 202 ~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~-------~--~~---~-~~~----dv~~~s~ 264 (285)
...++++++++|+||| |.+++.+++++|+++|++||+++|+||+|..+ . .+ . .+. ++++.|+
T Consensus 174 ~~~~~~~~~~~p~nPt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 252 (412)
T 1yaa_A 174 PEGSIFVLHSCAHNPT-GLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSF 252 (412)
T ss_dssp CTTCEEEEECSSCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEEC
T ss_pred CCCCEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEecc
Confidence 1135666669999999 89999999999999999999999999998622 1 11 1 233 2458999
Q ss_pred ccccCc--ceeEEee
Q psy5413 265 SKGLGA--PVGSILA 277 (285)
Q Consensus 265 sK~l~~--p~gg~~~ 277 (285)
||.++. .+.|+++
T Consensus 253 sK~~~~~GlriG~~~ 267 (412)
T 1yaa_A 253 AKNAGMYGERVGCFH 267 (412)
T ss_dssp TTTSCCGGGCEEEEE
T ss_pred CCCCCCcCCcceEEE
Confidence 999875 3446665
No 188
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.82 E-value=1.4e-19 Score=168.26 Aligned_cols=176 Identities=18% Similarity=0.235 Sum_probs=130.4
Q ss_pred CccCChhHHHHHHH----HHhHcCCC----cEEEcCChHHHHHHHHHHccc-------cCC-----C-eEEecCCcceee
Q psy5413 96 VYLEDPTCKELQEK----AAKLAGKE----AAIFVPSGTMGNLIAIMTHCD-------RRD-----S-EIIVGDCSHIML 154 (285)
Q Consensus 96 ~y~~~~~~~~l~~~----la~~~g~~----~~~~~~~Gs~a~~~al~~~~~-------~~g-----~-~vi~~~~~h~~~ 154 (285)
.|...+...++++. +++++|.+ .++|++|||+|+..++.++.. ++| + .|++++..|.++
T Consensus 123 ~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~ 202 (504)
T 2okj_A 123 TYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI 202 (504)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred chhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHH
Confidence 45555665555555 47778865 469999999999999998753 245 5 688888889877
Q ss_pred ecccccccccccccccce-eeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHH
Q psy5413 155 WEQGGASQTSVYSQIGRV-LMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKAR 233 (285)
Q Consensus 155 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~l 233 (285)
....... . .|. +++.+|.++++.+|+++|+++|+++. ..+.++++|+++.++|++ |.+.| +++|+++
T Consensus 203 ~~~~~~~------g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~-~~g~~~~~V~~~~~~~~t-G~i~~---l~~I~~l 270 (504)
T 2okj_A 203 KKAGAAL------G-FGTDNVILIKCNERGKIIPADFEAKILEAK-QKGYVPFYVNATAGTTVY-GAFDP---IQEIADI 270 (504)
T ss_dssp HHHHHHT------T-SCGGGEEEECBCTTSCBCHHHHHHHHHHHH-HTTCEEEEEEECBSCSSS-CCBCC---HHHHHHH
T ss_pred HHHHHHc------C-CCcccEEEEecCCCCCCCHHHHHHHHHHHH-HCCCCceEEEEeCCCCCC-CCcCC---HHHHHHH
Confidence 6543333 1 133 77888887788899999999997621 123358999999999999 89999 9999999
Q ss_pred HHHcCCeEEEeCccCChh--------hh--cccCCeEEEecccccCcce-eEEe-ecCcccc
Q psy5413 234 CQEHNIPVHMDGARLPLA--------EV--CASVDTVMFCLSKGLGAPV-GSIL-AGPEEFI 283 (285)
Q Consensus 234 a~~~gi~li~Dea~~~~~--------~~--~~~~dv~~~s~sK~l~~p~-gg~~-~~~~~~i 283 (285)
|++||+|+|+|++|++.. .+ .+++|++++++|||+++|. .|++ +.+++++
T Consensus 271 a~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~ 332 (504)
T 2okj_A 271 CEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGIL 332 (504)
T ss_dssp HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHH
T ss_pred HHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHH
Confidence 999999999999988322 11 2478999999999999743 3444 4544443
No 189
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.82 E-value=5.6e-20 Score=165.87 Aligned_cols=161 Identities=14% Similarity=0.118 Sum_probs=127.9
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccc-ccccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQG-GASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~~~~~~~g~~~~~~ 177 (285)
.++...++++.+++++|.+..+++++|++|+..+++ ++ ++||+|+++.+.|..+.... ... ...|.+++.+
T Consensus 53 ~~~~~~~lr~~la~~~g~~~~i~~~sGt~a~~~al~-~~-~~gd~Vi~~~~~y~~~~~~~~~~~------~~~G~~v~~v 124 (393)
T 1n8p_A 53 QNPNRENLERAVAALENAQYGLAFSSGSATTATILQ-SL-PQGSHAVSIGDVYGGTHRYFTKVA------NAHGVETSFT 124 (393)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHH-TS-CSSCEEEEESSCCHHHHHHHHHTS------TTTCSCCEEE
T ss_pred CChhHHHHHHHHHHHhCCCcEEEECChHHHHHHHHH-Hc-CCCCEEEEeCCCchHHHHHHHHHH------HHcCcEEEEe
Confidence 457789999999999999888999999999999999 66 58999998877765332211 011 3457788887
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc----CCeEEEeCccCChh--
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH----NIPVHMDGARLPLA-- 251 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~----gi~li~Dea~~~~~-- 251 (285)
+.+ | ++++++|++ ++++|++++|+|++ |.++| +++|+++|++| |+++|+||+|+...
T Consensus 125 ~~~-----d-~~l~~~i~~-------~t~lv~~~~~~npt-G~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~ 187 (393)
T 1n8p_A 125 NDL-----L-NDLPQLIKE-------NTKLVWIETPTNPT-LKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS 187 (393)
T ss_dssp SSH-----H-HHHHHHSCS-------SEEEEEECSSCTTT-CCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC
T ss_pred CCC-----h-HHHHHhccc-------CceEEEEECCCCCc-ceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC
Confidence 763 7 899999976 79999999999999 89999 99999999999 99999999998221
Q ss_pred -hhcccCCeEEEecccccCcc---eeEEeec-Cccccc
Q psy5413 252 -EVCASVDTVMFCLSKGLGAP---VGSILAG-PEEFIQ 284 (285)
Q Consensus 252 -~~~~~~dv~~~s~sK~l~~p---~gg~~~~-~~~~i~ 284 (285)
....+.|+++.|+||+++++ +||+++. ++++++
T Consensus 188 ~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~ 225 (393)
T 1n8p_A 188 NPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYE 225 (393)
T ss_dssp CGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH
T ss_pred CHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHH
Confidence 12236899999999999973 5577776 456543
No 190
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.82 E-value=1.7e-19 Score=166.95 Aligned_cols=186 Identities=16% Similarity=0.178 Sum_probs=133.5
Q ss_pred HHHHHHHhccc-CCCCccCChhHHHHHHHH----HhHcCCCc-----------EEEcCChHHHHHHHHHHcccc--C---
Q psy5413 82 EMKNYMFNCEV-GDDVYLEDPTCKELQEKA----AKLAGKEA-----------AIFVPSGTMGNLIAIMTHCDR--R--- 140 (285)
Q Consensus 82 ~v~~a~~~~~~-~~~~y~~~~~~~~l~~~l----a~~~g~~~-----------~~~~~~Gs~a~~~al~~~~~~--~--- 140 (285)
.+.+++..... +...|...+...++++.+ ++++|.+. +++++|||+|+..++.++... +
T Consensus 89 ~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~ 168 (486)
T 1js3_A 89 MLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQ 168 (486)
T ss_dssp HHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhh
Confidence 45555555433 234566667677777665 55567653 589999999999999886531 1
Q ss_pred ---CC--------e--EEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEE
Q psy5413 141 ---DS--------E--IIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 141 ---g~--------~--vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
|+ + |+++...|.++...... .|..++.++.++++.+|+++|+++|+++.+ .+..+.+
T Consensus 169 ~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~---------~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~-~g~~p~~ 238 (486)
T 1js3_A 169 AASPGLTQGAVLEKLVAYASDQAHSSVERAGLI---------GGVKLKAIPSDGKFAMRASALQEALERDKA-AGLIPFF 238 (486)
T ss_dssp HHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHH---------HTCEEEEECCCTTSCCCHHHHHHHHHHHHH-TTCEEEE
T ss_pred ccCccchhcccCCCEEEEECCCCcHHHHHHHHh---------CCCceEEeecCCCCCCCHHHHHHHHHHHHh-CCCCceE
Confidence 32 3 67788899876653333 388889998877888999999999987211 1112358
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh----h------cccCCeEEEecccccCcc-eeEEe
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE----V------CASVDTVMFCLSKGLGAP-VGSIL 276 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~----~------~~~~dv~~~s~sK~l~~p-~gg~~ 276 (285)
|+++.++|++ |.+.| +++|+++|++||+|+|+|++|+.... . ..++|++++++||++++| ..|++
T Consensus 239 vv~~~~~n~t-G~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l 314 (486)
T 1js3_A 239 VVATLGTTSC-CSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAM 314 (486)
T ss_dssp EEEEBSCTTT-CCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEE
T ss_pred EEEeCCCCCC-CCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEE
Confidence 9999999999 88888 99999999999999999999883211 1 147899999999999874 33444
Q ss_pred -ecCcc
Q psy5413 277 -AGPEE 281 (285)
Q Consensus 277 -~~~~~ 281 (285)
+.+++
T Consensus 315 ~~~~~~ 320 (486)
T 1js3_A 315 WVKRRT 320 (486)
T ss_dssp EESCHH
T ss_pred EEeCHH
Confidence 44443
No 191
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.82 E-value=6.4e-20 Score=167.12 Aligned_cols=215 Identities=16% Similarity=0.109 Sum_probs=140.6
Q ss_pred CCeeeeeccCC----cCCCcHHHHHHHHhcccCC--C-CccCChhHHHHHHHHHhHcC--CCcEEEcCChHHHHHHHHHH
Q psy5413 65 NIRTVDIRSDT----ISKPTMEMKNYMFNCEVGD--D-VYLEDPTCKELQEKAAKLAG--KEAAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 65 ~~~~~~~~~~~----~~~~~~~v~~a~~~~~~~~--~-~y~~~~~~~~l~~~la~~~g--~~~~~~~~~Gs~a~~~al~~ 135 (285)
|+.++||.++. .++++|++.+++.++.... . .....+...++++.++++++ .+.+++++||++|++.++++
T Consensus 42 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~ 121 (433)
T 1zod_A 42 GRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRM 121 (433)
T ss_dssp CCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHH
Confidence 56778885543 3456899999998776421 1 11235668899999999986 45679999999999999997
Q ss_pred ccccC-CCeEEecC-Ccceeeecccccccc---cccc-cccceeeeeeecCCC--C--------CCCHHHHHHHhccccc
Q psy5413 136 HCDRR-DSEIIVGD-CSHIMLWEQGGASQT---SVYS-QIGRVLMRGVTNQKD--G--------TFDLDEMEAKFSTADN 199 (285)
Q Consensus 136 ~~~~~-g~~vi~~~-~~h~~~~~~~~~~~~---~~~~-~~~g~~~~~~~~~~~--~--------~~d~~~l~~~i~~~~~ 199 (285)
+...+ +++|++.+ .+|+.+......... ..|. ...+...+.++.... + .+|+++|++++++.
T Consensus 122 ~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-- 199 (433)
T 1zod_A 122 AKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ-- 199 (433)
T ss_dssp HHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--
T ss_pred HHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--
Confidence 64323 45677654 567654321111100 0010 112455554443111 1 13699999999741
Q ss_pred ccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh-----hcc----cCCeEEEecccccCc
Q psy5413 200 IHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE-----VCA----SVDTVMFCLSKGLGA 270 (285)
Q Consensus 200 ~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~-----~~~----~~dv~~~s~sK~l~~ 270 (285)
+.+++++|++++++|++|..+.+.+++++|+++|++||++||+||+|+++.. ..+ ..| +.++||++++
T Consensus 200 -~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~d--i~s~sK~~~~ 276 (433)
T 1zod_A 200 -SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPD--ILTLSKTLGA 276 (433)
T ss_dssp -CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS--EEEECHHHHT
T ss_pred -CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCC--EEEecccccC
Confidence 1127899999988888833678899999999999999999999999984321 111 223 5588899876
Q ss_pred -ceeEEeecCccccc
Q psy5413 271 -PVGSILAGPEEFIQ 284 (285)
Q Consensus 271 -p~gg~~~~~~~~i~ 284 (285)
.+.|++++++++++
T Consensus 277 G~~ig~~~~~~~~~~ 291 (433)
T 1zod_A 277 GLPLAAIVTSAAIEE 291 (433)
T ss_dssp TSSCEEEEECHHHHH
T ss_pred CCCeeEEEEhHHHHH
Confidence 33456666666653
No 192
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.82 E-value=1.1e-20 Score=177.28 Aligned_cols=198 Identities=12% Similarity=0.113 Sum_probs=144.7
Q ss_pred eeeeccCCcCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHc-------CC-----CcEEEcCChHHHHHHHHHH
Q psy5413 68 TVDIRSDTISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLA-------GK-----EAAIFVPSGTMGNLIAIMT 135 (285)
Q Consensus 68 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~-------g~-----~~~~~~~~Gs~a~~~al~~ 135 (285)
+++|..+.+..+++.+.+++.+.... ..|.......++++.+++.+ +. +.+++++|+++++..++.+
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~ 184 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDGILG-CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFES 184 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHT-CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred hhecccCCCCCCChHHHHHHHHhhhc-CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence 67888888888888888888766543 45765545556776665543 11 3458888889999999887
Q ss_pred c----cccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccCCceEEEE
Q psy5413 136 H----CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHCASTSLVC 209 (285)
Q Consensus 136 ~----~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 209 (285)
+ +.++||.|++++++|........+. ..|.+++.++.++ ++.+|+++|++.++. ++++|+
T Consensus 185 l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~-------~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-------~~k~v~ 250 (546)
T 2zy4_A 185 LKLNGLLKAGDKVAIGMPVFTPYIEIPELA-------QYALEEVAINADPSLNWQYPDSELDKLKDP-------AIKIFF 250 (546)
T ss_dssp HHHTTSSCTTCEEEEEESCCHHHHHHHHST-------TSCCEEEEEECBGGGTTBCCHHHHGGGGST-------TEEEEE
T ss_pred hhhhhcCCCCCEEEEeCCCCccHHHHHHHc-------CCCcEEEEEecCcccCCCCCHHHHHHhhCC-------CCeEEE
Confidence 3 2358999999887765443321121 3367778887643 345899999988765 799999
Q ss_pred EecccCCCCeeeCCHHHHHHHHHHH--HHcCCeEEEeCccCChh-------hhcccCCeEEEecccccCc--ceeEEeec
Q psy5413 210 VENTHNYCGGTVLPMQWLRELKARC--QEHNIPVHMDGARLPLA-------EVCASVDTVMFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 210 i~~~~n~~gG~~~~~~~l~~i~~la--~~~gi~li~Dea~~~~~-------~~~~~~dv~~~s~sK~l~~--p~gg~~~~ 278 (285)
+++|+||| |.+++.+++++|+++| +++|++||+||+|..+. .......+++.|+||.+|. .+.|++++
T Consensus 251 l~~p~NPt-G~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~ 329 (546)
T 2zy4_A 251 CVNPSNPP-SVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVAA 329 (546)
T ss_dssp EESSCSSS-CBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEE
T ss_pred EECCCCCC-CccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcceEEEEE
Confidence 99999999 9999999999999999 78999999999988321 1112334669999999864 56677777
Q ss_pred Ccc
Q psy5413 279 PEE 281 (285)
Q Consensus 279 ~~~ 281 (285)
+++
T Consensus 330 ~~~ 332 (546)
T 2zy4_A 330 HQQ 332 (546)
T ss_dssp ESS
T ss_pred CCH
Confidence 654
No 193
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.82 E-value=1.6e-20 Score=170.55 Aligned_cols=202 Identities=13% Similarity=0.026 Sum_probs=149.1
Q ss_pred eeeeeccCCcC---C-CcHHHHHHHH--hcccC---CCCc-cCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHH--HH
Q psy5413 67 RTVDIRSDTIS---K-PTMEMKNYMF--NCEVG---DDVY-LEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNL--IA 132 (285)
Q Consensus 67 ~~~~~~~~~~~---~-~~~~v~~a~~--~~~~~---~~~y-~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~--~a 132 (285)
..++|..+.+. . .++.+.+++. +.... ...| +..+...+|++.++++++.+ .+++++|+++++. .+
T Consensus 26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~ 105 (423)
T 3ez1_A 26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVL 105 (423)
T ss_dssp CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHH
T ss_pred ceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHH
Confidence 45888888887 3 3457888875 44332 2467 66667889999999999864 5689999999997 88
Q ss_pred HHHcccc-C---------CCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccC
Q psy5413 133 IMTHCDR-R---------DSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHC 202 (285)
Q Consensus 133 l~~~~~~-~---------g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~ 202 (285)
+++++.. + |++|+++.++|....... ...|.+++.++.++++ +|+++|++++++ .
T Consensus 106 ~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~---------~~~g~~~~~v~~~~~g-~d~~~l~~~l~~-----~ 170 (423)
T 3ez1_A 106 TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLL---------QTLGFELLTVDMQSDG-PDVDAVERLAGT-----D 170 (423)
T ss_dssp HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHH---------HHHTCEEEEEEEETTE-ECHHHHHHHHHS-----C
T ss_pred HHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHH---------HHcCCEEEeccCCCCC-CCHHHHHHHHhh-----C
Confidence 8876631 5 588999888775443322 2348888888875554 899999999952 1
Q ss_pred CceEEEEEe-cccCCCCeeeCCHHHHHHHHHHH-HHcCCeEEEeCccCCh--h-----------hh-----cccCCeEEE
Q psy5413 203 ASTSLVCVE-NTHNYCGGTVLPMQWLRELKARC-QEHNIPVHMDGARLPL--A-----------EV-----CASVDTVMF 262 (285)
Q Consensus 203 ~~~~~v~i~-~~~n~~gG~~~~~~~l~~i~~la-~~~gi~li~Dea~~~~--~-----------~~-----~~~~dv~~~ 262 (285)
.++++|++. +++||| |.+++.+++++|+++| ++||+++|+||+|... . .+ ..+.++++.
T Consensus 171 ~~~~~v~~~~~~~NPt-G~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 249 (423)
T 3ez1_A 171 PSVKGILFVPTYSNPG-GETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFA 249 (423)
T ss_dssp TTEEEEEECSSSCTTT-CCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEE
T ss_pred CCceEEEECCCCCCCC-CcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEe
Confidence 178999876 699999 9999999999999999 9999999999998721 1 11 112345699
Q ss_pred eccccc-CcceeEEeecCccccc
Q psy5413 263 CLSKGL-GAPVGSILAGPEEFIQ 284 (285)
Q Consensus 263 s~sK~l-~~p~gg~~~~~~~~i~ 284 (285)
|+||++ +|.+.|+++.++++++
T Consensus 250 S~sK~~~~G~r~G~~~~~~~~~~ 272 (423)
T 3ez1_A 250 STSKITFAGAGLGFVASSEDNIR 272 (423)
T ss_dssp ESTTTSCSSSSCEEEEECHHHHH
T ss_pred CchhhccCCcceEEEEeCHHHHH
Confidence 999963 4466778888877654
No 194
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.82 E-value=1.6e-19 Score=166.12 Aligned_cols=193 Identities=19% Similarity=0.161 Sum_probs=141.7
Q ss_pred eeeeeccC-CcCC-CcHHHHHHHHhc----cc-CCCCcc--CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHcc
Q psy5413 67 RTVDIRSD-TISK-PTMEMKNYMFNC----EV-GDDVYL--EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 67 ~~~~~~~~-~~~~-~~~~v~~a~~~~----~~-~~~~y~--~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~ 137 (285)
.++++..+ .+.. .++.+.++.... .. +...|+ .++...++++.+++++|.+.++++++|++|+..+++ ++
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~~l~-~~ 168 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVTH-LI 168 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHT-TS
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHH-Hh
Confidence 34555553 3333 344565554421 11 223342 456789999999999999888999999999998886 45
Q ss_pred ccCCCeEEecCCcceeeeccc-ccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCC
Q psy5413 138 DRRDSEIIVGDCSHIMLWEQG-GASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNY 216 (285)
Q Consensus 138 ~~~g~~vi~~~~~h~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~ 216 (285)
++||+|+++++.|..+.... ... ...|.+++.++.. |+++++++|++ ++++|++++|+||
T Consensus 169 -~~Gd~Vi~~~~~y~~~~~~~~~~~------~~~G~~v~~v~~~-----d~~~l~~~i~~-------~tk~v~l~~p~Np 229 (464)
T 1ibj_A 169 -KNGEEIVAGDDVYGGSDRLLSQVV------PRSGVVVKRVNTT-----KLDEVAAAIGP-------QTKLVWLESPTNP 229 (464)
T ss_dssp -CTTCEEEEESSCCHHHHHHHHHTS------GGGTCEEEEECTT-----SHHHHHHHCCS-------SEEEEEECSSCTT
T ss_pred -CCCCEEEEECCCchhHHHHHHHHH------HHcCCEEEEeCCC-----CHHHHHHHhcc-------CceEEEEeCCCCC
Confidence 68999999887765443210 112 3458888888763 89999999987 8999999999999
Q ss_pred CCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC-hh--hhcccCCeEEEecccccCcc---eeEEeecCc-ccc
Q psy5413 217 CGGTVLPMQWLRELKARCQEHNIPVHMDGARLP-LA--EVCASVDTVMFCLSKGLGAP---VGSILAGPE-EFI 283 (285)
Q Consensus 217 ~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~-~~--~~~~~~dv~~~s~sK~l~~p---~gg~~~~~~-~~i 283 (285)
+ |.+++ +++|+++|++||+++|+||+|.. .. ....+.|+++.|+||+++++ ++|+++.++ +++
T Consensus 230 t-G~v~~---l~~i~~la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~ 299 (464)
T 1ibj_A 230 R-QQISD---IRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLA 299 (464)
T ss_dssp T-CCCCC---HHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHH
T ss_pred C-CEeec---HHHHHHHHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHH
Confidence 9 89998 99999999999999999999882 21 22246899999999999863 557777664 554
No 195
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.82 E-value=8e-20 Score=166.41 Aligned_cols=203 Identities=13% Similarity=0.044 Sum_probs=138.5
Q ss_pred CCeeeeeccCCcCC-CcHHHHHHHHhccc------CCCCccCChhHHHHHHHHHhHc----CC--CcEEEcCChHHHHHH
Q psy5413 65 NIRTVDIRSDTISK-PTMEMKNYMFNCEV------GDDVYLEDPTCKELQEKAAKLA----GK--EAAIFVPSGTMGNLI 131 (285)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~v~~a~~~~~~------~~~~y~~~~~~~~l~~~la~~~----g~--~~~~~~~~Gs~a~~~ 131 (285)
++++++|..+++.. .+|.+.+++.++.. +...|+......+|++.+++++ +. +.+++++|+++++..
T Consensus 55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~ 134 (432)
T 3ei9_A 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR 134 (432)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH
Confidence 45789999887775 67799999887654 1235655566789999999996 43 456888888999886
Q ss_pred HHHHccccCCCeEEecCCcceeeeccccccc-cccccc--ccceeeeeeecCCC--CCCCHHHHHHHhcccccccCCceE
Q psy5413 132 AIMTHCDRRDSEIIVGDCSHIMLWEQGGASQ-TSVYSQ--IGRVLMRGVTNQKD--GTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 132 al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~-~~~~~~--~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
+..++ ++||.|+++.+.|........... ...+.. ....+++.++.+++ ...|+++ .+ +++
T Consensus 135 -l~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~-------~~~ 200 (432)
T 3ei9_A 135 -LQVMF-GSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VG-------RTD 200 (432)
T ss_dssp -HHHHH-CTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CC-------CCS
T ss_pred -HHHHc-CCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CC-------CCC
Confidence 45555 589999998887755433221210 000000 00024555555332 2234222 12 688
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh---------hhhc--ccCCeEEEecccccCc--cee
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---------AEVC--ASVDTVMFCLSKGLGA--PVG 273 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---------~~~~--~~~dv~~~s~sK~l~~--p~g 273 (285)
+|++++|+||+ |.+++.+++++|+++|++||+++|+||+|..+ ..+. ...++++.|+||+++. .+.
T Consensus 201 ~v~l~~p~NPt-G~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~ 279 (432)
T 3ei9_A 201 IIFFCSPNNPT-GAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRL 279 (432)
T ss_dssp EEEEESSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCC
T ss_pred EEEEeCCCCCC-CCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccce
Confidence 99999999999 89999999999999999999999999998822 1111 1234669999999864 556
Q ss_pred EEeecCccc
Q psy5413 274 SILAGPEEF 282 (285)
Q Consensus 274 g~~~~~~~~ 282 (285)
|++++++++
T Consensus 280 G~~~~~~~~ 288 (432)
T 3ei9_A 280 GWTVIPKKL 288 (432)
T ss_dssp EEEECCTTC
T ss_pred EEEEEChHH
Confidence 778777766
No 196
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.82 E-value=4e-20 Score=163.71 Aligned_cols=189 Identities=11% Similarity=0.073 Sum_probs=138.1
Q ss_pred CCeeeeeccCC-cCCCcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHHHHccccCC
Q psy5413 65 NIRTVDIRSDT-ISKPTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAIMTHCDRRD 141 (285)
Q Consensus 65 ~~~~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al~~~~~~~g 141 (285)
|+.++||.++. +..++|++.+++.+.......|.... ..++++.++++++.+ .+++++||++|+..+++++. |
T Consensus 14 g~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~-~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~---g 89 (350)
T 3fkd_A 14 SSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPD-AGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR---G 89 (350)
T ss_dssp --CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTT-CHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT---T
T ss_pred cccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCc-HHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC---C
Confidence 46789998764 44578899999988774444565444 389999999999865 57999999999999999875 8
Q ss_pred CeEEecCCcceeeecccccccccccccccceeeeeeec-CCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCee
Q psy5413 142 SEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN-QKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGT 220 (285)
Q Consensus 142 ~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~ 220 (285)
|+|+++.++|....... ...|.+++.++. ++...+++ + ++++|++++|+||+ |.
T Consensus 90 d~Vi~~~p~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~~~--------~-------~~~~v~i~~p~npt-G~ 144 (350)
T 3fkd_A 90 SRSLIAIPSFAEYEDAC---------RMYEHEVCFYPSNEDIGEADF--------S-------NMDFCWLCNPNNPD-GR 144 (350)
T ss_dssp CEEEEEESCCHHHHHHH---------HHTTCEEEEEETTSCGGGSCC--------T-------TCSEEEEESSCTTT-CC
T ss_pred CEEEEeCCCcHHHHHHH---------HHcCCeEEEEecCCccccCcc--------C-------CCCEEEEeCCCCCc-CC
Confidence 99999888775543322 234888888887 44333333 3 68999999999999 99
Q ss_pred eCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhcc--cCCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 221 VLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVCA--SVDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 221 ~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~~--~~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
++|.+++++|++.|+++ ++|+||+|..+. .... ..++++.|+||+++. .+.|+++.++++++
T Consensus 145 ~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~ 217 (350)
T 3fkd_A 145 LLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMK 217 (350)
T ss_dssp CCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHH
T ss_pred CCCHHHHHHHHHhCCCC--EEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHH
Confidence 99977777777766655 999999988211 1111 223568999999873 56678887877654
No 197
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.82 E-value=8.4e-20 Score=167.98 Aligned_cols=204 Identities=11% Similarity=0.055 Sum_probs=143.2
Q ss_pred CeeeeeccCCcCCCcHHHHHHHHhcccC--------CC-Cc-cCChhHHHHHHHHHhHcCCC--cEEEcCChHHHHHHHH
Q psy5413 66 IRTVDIRSDTISKPTMEMKNYMFNCEVG--------DD-VY-LEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGNLIAI 133 (285)
Q Consensus 66 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~--------~~-~y-~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~~~al 133 (285)
+..+.|.++..+..++.+.+++.+.+.. +. .+ .......++++.+++++|.+ .+++++|+++++..++
T Consensus 66 ~~~iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~ 145 (465)
T 3e9k_A 66 ENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLLM 145 (465)
T ss_dssp CBCEECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHH
T ss_pred CCeEEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHH
Confidence 4567777766665555666665544321 11 11 12244577999999999875 5699999999999999
Q ss_pred HHccccCCC---eEEecCCcceeeec-ccccccccccccccceee-----eeeecCCCCCCCHHHHHHHhcccccccCCc
Q psy5413 134 MTHCDRRDS---EIIVGDCSHIMLWE-QGGASQTSVYSQIGRVLM-----RGVTNQKDGTFDLDEMEAKFSTADNIHCAS 204 (285)
Q Consensus 134 ~~~~~~~g~---~vi~~~~~h~~~~~-~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 204 (285)
++++ ++++ +|++..+.|.+... ..... ...|.++ ...+.+.++.+|+++|+++|++ +.++
T Consensus 146 ~~~~-~~~~~~~~Vl~~~~~~~s~~~~~~~~~------~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~----~~~~ 214 (465)
T 3e9k_A 146 LSFF-KPTPKRYKILLEAKAFPSDHYAIESQL------QLHGLNIEESMRMIKPREGEETLRIEDILEVIEK----EGDS 214 (465)
T ss_dssp HHHC-CCCSSSCEEEEETTCCHHHHHHHHHHH------HHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHH----HGGG
T ss_pred HHhc-cccCCCCEEEEcCCcCCchHHHHHHHH------HHcCCcceeeeEEEecCCCCCccCHHHHHHHHHh----cCCC
Confidence 9986 3544 49988887754321 11111 1234443 2335555677899999999974 2237
Q ss_pred eEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh---hhcccCCeEEEecccccC-ccee-EEeec
Q psy5413 205 TSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLA---EVCASVDTVMFCLSKGLG-APVG-SILAG 278 (285)
Q Consensus 205 ~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~---~~~~~~dv~~~s~sK~l~-~p~g-g~~~~ 278 (285)
+++|++++++|++ |.+.| +++|.++|++||+++|+|++|+ +.. ....++|+++.|++|+++ +|.| |+++.
T Consensus 215 ~~lv~~~~~~n~t-G~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~ 290 (465)
T 3e9k_A 215 IAVILFSGVHFYT-GQHFN---IPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFI 290 (465)
T ss_dssp EEEEEEESBCTTT-CBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEE
T ss_pred eEEEEEeCcccCc-ceeec---HHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECcccccccCCCceEEEEE
Confidence 9999999999999 89999 9999999999999999999988 221 123578999999999994 5654 66666
Q ss_pred Cccccc
Q psy5413 279 PEEFIQ 284 (285)
Q Consensus 279 ~~~~i~ 284 (285)
++++++
T Consensus 291 ~~~~~~ 296 (465)
T 3e9k_A 291 HEKHAH 296 (465)
T ss_dssp CGGGTT
T ss_pred cHHHHh
Confidence 676653
No 198
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.82 E-value=9.2e-20 Score=165.37 Aligned_cols=181 Identities=17% Similarity=0.111 Sum_probs=138.6
Q ss_pred CcHHHHHHHHhcccC-CC-Ccc----CChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc-cccCCCeEEecCCcc
Q psy5413 79 PTMEMKNYMFNCEVG-DD-VYL----EDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH-CDRRDSEIIVGDCSH 151 (285)
Q Consensus 79 ~~~~v~~a~~~~~~~-~~-~y~----~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~-~~~~g~~vi~~~~~h 151 (285)
.++++.+++.+.... .. .|+ ..+...++++.+++++|.+..+++++|++|+..+++++ + ++|++|+++.+.|
T Consensus 14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~-~~gd~Vl~~~~~~ 92 (418)
T 2c81_A 14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGI-GEGDEVIVPSLTW 92 (418)
T ss_dssp CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTC-CTTCEEEEESSSC
T ss_pred CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCC-CCcCEEEECCCcc
Confidence 367888888776542 11 133 22348999999999999988899999999999999998 5 6899999998888
Q ss_pred eeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHH
Q psy5413 152 IMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLREL 230 (285)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i 230 (285)
....... ...|.+++.++.++ ++.+|+++|++++++ ++++|++++ ++ |.+.+ +++|
T Consensus 93 ~~~~~~~---------~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~---~~-G~~~~---~~~i 149 (418)
T 2c81_A 93 IATATAV---------LNVNALPVFVDVEADTYCIDPQLIKSAITD-------KTKAIIPVH---LF-GSMAN---MDEI 149 (418)
T ss_dssp THHHHHH---------HHTTCEEEEECBCTTTCSBCHHHHGGGCCT-------TEEEECCBC---CT-TCCCC---HHHH
T ss_pred HhHHHHH---------HHcCCEEEEEecCCCCCCcCHHHHHHhhCC-------CCeEEEEeC---Cc-CCccc---HHHH
Confidence 6654422 23488888888754 677899999999977 789998765 45 77777 9999
Q ss_pred HHHHHHcCCeEEEeCccCChh-----hhcccCCeEEEec--ccccCcceeEEeecC-cccc
Q psy5413 231 KARCQEHNIPVHMDGARLPLA-----EVCASVDTVMFCL--SKGLGAPVGSILAGP-EEFI 283 (285)
Q Consensus 231 ~~la~~~gi~li~Dea~~~~~-----~~~~~~dv~~~s~--sK~l~~p~gg~~~~~-~~~i 283 (285)
.++|++||++||+||+|+... ......|+.+.|+ ||++++..||+++.+ ++++
T Consensus 150 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~ 210 (418)
T 2c81_A 150 NEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNPRLF 210 (418)
T ss_dssp HHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHH
T ss_pred HHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECCHHHH
Confidence 999999999999999998332 1112236777777 999987677888774 5554
No 199
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.82 E-value=3.8e-20 Score=167.43 Aligned_cols=204 Identities=14% Similarity=0.112 Sum_probs=138.3
Q ss_pred CeeeeeccCCcCCCc---HHHHHHHHhcccCC------CCccCChhHHHHHHHHHhHc------C--CCcEEEcCChHHH
Q psy5413 66 IRTVDIRSDTISKPT---MEMKNYMFNCEVGD------DVYLEDPTCKELQEKAAKLA------G--KEAAIFVPSGTMG 128 (285)
Q Consensus 66 ~~~~~~~~~~~~~~~---~~v~~a~~~~~~~~------~~y~~~~~~~~l~~~la~~~------g--~~~~~~~~~Gs~a 128 (285)
+.+++|..+.+.... +.+.+++.+...+. ..|.......++++.+++++ + .+.+++++||++|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~a 110 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSA 110 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHH
Confidence 467889888777632 35566665544321 25776677889999999986 2 2467999999999
Q ss_pred HHHHHHHccccCCC-----eEEec-CCcceeeecccc-cccccccccccceeeeeeecC-CCCCCCHHHHHHHhcccccc
Q psy5413 129 NLIAIMTHCDRRDS-----EIIVG-DCSHIMLWEQGG-ASQTSVYSQIGRVLMRGVTNQ-KDGTFDLDEMEAKFSTADNI 200 (285)
Q Consensus 129 ~~~al~~~~~~~g~-----~vi~~-~~~h~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~ 200 (285)
+..++++++ ++|+ +|+++ .++|........ .. .+ ...+..+..++.. ..+.+|+++++ +++
T Consensus 111 l~~~~~~l~-~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~d~~~l~--~~~---- 179 (417)
T 3g7q_A 111 FFYLFNLFA-GRRADGSTKKVLFPLAPEYIGYADSGLEDD---LF-VSARPNIELLPEGQFKYHVDFEHLH--IGE---- 179 (417)
T ss_dssp HHHHHHHHS-BC----CCBEEEESSCCCHHHHHC-----C---CE-EECCCEEEEEGGGEEEEECCGGGCC--CCT----
T ss_pred HHHHHHHHc-CCCccCCcceEEEeCCCccccchhhccchh---hh-ccccCcccccCCcccccccCHHHhc--ccc----
Confidence 999999987 5776 78875 655433221110 00 00 1224445555432 13356888887 555
Q ss_pred cCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh------hh---cccCCeEEEecccccCc-
Q psy5413 201 HCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA------EV---CASVDTVMFCLSKGLGA- 270 (285)
Q Consensus 201 ~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------~~---~~~~dv~~~s~sK~l~~- 270 (285)
++++|++++|+||| |.+++.+++++|+++|++||+++|+||+|.... .. ....++++.|+||+++.
T Consensus 180 ---~~~~v~~~~p~Npt-G~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G 255 (417)
T 3g7q_A 180 ---ETGMICVSRPTNPT-GNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSKLGLPG 255 (417)
T ss_dssp ---TEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGGGTCTT
T ss_pred ---CceEEEECCCCCCC-CCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechhccCCC
Confidence 78999999999999 999999999999999999999999999987211 11 12334569999995332
Q ss_pred ceeEEeecCccccc
Q psy5413 271 PVGSILAGPEEFIQ 284 (285)
Q Consensus 271 p~gg~~~~~~~~i~ 284 (285)
.+.|+++.++++++
T Consensus 256 ~r~G~~~~~~~~~~ 269 (417)
T 3g7q_A 256 SRCGIIIANDKTIT 269 (417)
T ss_dssp SCCEEEECCHHHHH
T ss_pred cceEEEEeCHHHHH
Confidence 45678888877654
No 200
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.82 E-value=8.3e-20 Score=164.77 Aligned_cols=194 Identities=14% Similarity=0.120 Sum_probs=138.4
Q ss_pred CCeeeeeccCCcC-CCcHHHHHHHHhcccC------CCCccCChhHHHHHHHHHhH--cC-C--CcEEEcCChHHHHHHH
Q psy5413 65 NIRTVDIRSDTIS-KPTMEMKNYMFNCEVG------DDVYLEDPTCKELQEKAAKL--AG-K--EAAIFVPSGTMGNLIA 132 (285)
Q Consensus 65 ~~~~~~~~~~~~~-~~~~~v~~a~~~~~~~------~~~y~~~~~~~~l~~~la~~--~g-~--~~~~~~~~Gs~a~~~a 132 (285)
++.+++|..+.+. .++|.+.+++.++... ...|+..+...++++.++++ .| . +.+++++|+++++..+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~ 111 (400)
T 3asa_A 32 QHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRL 111 (400)
T ss_dssp TSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHH
T ss_pred CCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHH
Confidence 4567899877665 4678899998765531 23465556688999999999 46 3 4578999999999987
Q ss_pred HHHccccCCCeEEecCCcceeeeccccccccccccccccee-eeeeecCCCC--CCCHHHHHHHhcccccccCCceEEEE
Q psy5413 133 IMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVL-MRGVTNQKDG--TFDLDEMEAKFSTADNIHCASTSLVC 209 (285)
Q Consensus 133 l~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~~v~ 209 (285)
+.. + .+|++|++..++|...... . ...|.+ ++.++.++++ ..|++ + + + ++++|+
T Consensus 112 ~~~-~-~~gd~Vl~~~p~y~~~~~~---~------~~~g~~~~~~~~~~~~~~~~~~l~---~-~-~-------~~~~v~ 168 (400)
T 3asa_A 112 LSF-F-GPNQTVAIQDPSYPAYLDI---A------RLTGAKEIIALPCLQENAFFPEFP---E-D-T-------HIDILC 168 (400)
T ss_dssp HHH-H-CSSCEEEEEESCCHHHHHH---H------HHTTCSEEEEEECCGGGTTCCCCC---T-T-C-------CCSEEE
T ss_pred HHH-c-CCCCEEEECCCCcHHHHHH---H------HHcCCcceEecccchhcCcccChh---h-c-c-------CccEEE
Confidence 654 4 5889999887776443321 1 233666 7777764322 22321 1 1 2 689999
Q ss_pred EecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc--c-cCC--eEEEecccccCc--ceeEE
Q psy5413 210 VENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC--A-SVD--TVMFCLSKGLGA--PVGSI 275 (285)
Q Consensus 210 i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~--~-~~d--v~~~s~sK~l~~--p~gg~ 275 (285)
+++|+||| |.++|.+++++|+++|++||+++|+||+|..+. .+. . ..| +++.|+||+++. .+.|+
T Consensus 169 l~~p~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~ 247 (400)
T 3asa_A 169 LCSPNNPT-GTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGW 247 (400)
T ss_dssp EESSCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEE
T ss_pred EeCCCCCC-CCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeE
Confidence 99999999 899999999999999999999999999988221 111 1 133 569999999863 45677
Q ss_pred eecCccc
Q psy5413 276 LAGPEEF 282 (285)
Q Consensus 276 ~~~~~~~ 282 (285)
++.++++
T Consensus 248 ~~~~~~~ 254 (400)
T 3asa_A 248 TVIPQEL 254 (400)
T ss_dssp EECCTTC
T ss_pred EeeChhh
Confidence 7777776
No 201
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.81 E-value=2.7e-19 Score=164.00 Aligned_cols=199 Identities=17% Similarity=0.085 Sum_probs=142.8
Q ss_pred eeeeeccCCc-CC-----CcHHHHHHHHhcc----cCCCCccCChhHHHHHHHHHhHc-CCC-------cEEE--cCChH
Q psy5413 67 RTVDIRSDTI-SK-----PTMEMKNYMFNCE----VGDDVYLEDPTCKELQEKAAKLA-GKE-------AAIF--VPSGT 126 (285)
Q Consensus 67 ~~~~~~~~~~-~~-----~~~~v~~a~~~~~----~~~~~y~~~~~~~~l~~~la~~~-g~~-------~~~~--~~~Gs 126 (285)
..++|..+.+ +. ..+.+.+++.+.. .+...|.......++++.+++++ |.+ .+++ ++||+
T Consensus 50 ~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt 129 (448)
T 3meb_A 50 KKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGT 129 (448)
T ss_dssp TCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred CeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHH
Confidence 3588887766 32 4567777754433 23456766667889999999997 754 5677 99999
Q ss_pred HHHHHH--HHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeec-CCC--CCCCHHHHHHHhccccccc
Q psy5413 127 MGNLIA--IMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN-QKD--GTFDLDEMEAKFSTADNIH 201 (285)
Q Consensus 127 ~a~~~a--l~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~--~~~d~~~l~~~i~~~~~~~ 201 (285)
+|+..+ +..++ .+||+|++++++|......... +....|.+++.++. +++ +.+|++++++++++ +
T Consensus 130 ~al~l~~~~~~~~-~~gd~Vlv~~p~~~~~~~~~~~-----~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~----~ 199 (448)
T 3meb_A 130 GSLHIGFEFLHLW-MPKAEFYMPSTTWPNHYGIYDK-----VFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQS----A 199 (448)
T ss_dssp HHHHHHHHHHHHH-CTTCCEEEESSCCTHHHHHHHH-----HHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHH----S
T ss_pred HHHHHHHHHHHHh-CCCCEEEECCCCCHhHHHHHHh-----hHHhCCCeEEEEeccccccCCCcCHHHHHHHHHh----C
Confidence 999874 44444 5899999998887554332220 00034778888886 443 67999999999975 1
Q ss_pred CCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh------------hh-cccCCeE-EEecccc
Q psy5413 202 CASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA------------EV-CASVDTV-MFCLSKG 267 (285)
Q Consensus 202 ~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~------------~~-~~~~dv~-~~s~sK~ 267 (285)
..+++++++++|+||| |.+++.+++++|+++|++||+++|+||+|..+. .+ ..+.+++ +.|+||.
T Consensus 200 ~~~~~~v~~~~p~NPt-G~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 278 (448)
T 3meb_A 200 PEKSIFLFHACAHNPS-GIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKN 278 (448)
T ss_dssp CTTCEEEEESSSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTT
T ss_pred CCCcEEEEeCCCCCCC-CcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEeccccc
Confidence 2267899999999999 899999999999999999999999999977221 11 1234444 9999999
Q ss_pred cCc--ceeEEe
Q psy5413 268 LGA--PVGSIL 276 (285)
Q Consensus 268 l~~--p~gg~~ 276 (285)
++. .+.|++
T Consensus 279 ~g~~G~RiG~l 289 (448)
T 3meb_A 279 FGLYGERIGCL 289 (448)
T ss_dssp SCCGGGCCEEE
T ss_pred CCCccccceee
Confidence 875 344554
No 202
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.70 E-value=9.4e-22 Score=176.99 Aligned_cols=199 Identities=15% Similarity=0.125 Sum_probs=145.6
Q ss_pred eeeeeccCCcCC-CcHHHHHHHHhcccC-CCCccCChhHHHHHHHHHhHc----C----CCcEEEcCChHHHHHHHHHHc
Q psy5413 67 RTVDIRSDTISK-PTMEMKNYMFNCEVG-DDVYLEDPTCKELQEKAAKLA----G----KEAAIFVPSGTMGNLIAIMTH 136 (285)
Q Consensus 67 ~~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~----g----~~~~~~~~~Gs~a~~~al~~~ 136 (285)
.+++|..+.+.. ++|++.+++.++... ...|.. . ..++++.+++++ | .+.+++++||++|+..+++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~ 109 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTY-A-SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAF 109 (392)
Confidence 678888777654 567899998877643 334442 2 778888888875 3 245689999999999999998
Q ss_pred cccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC-C--CCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 137 CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ-K--DGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 137 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
. ++|++|++..++|....... ...|.+++.++.. . ++.+|++++++++++. ++++|++++|
T Consensus 110 ~-~~gd~vl~~~p~~~~~~~~~---------~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~------~~~~v~~~~~ 173 (392)
T 3b1d_A 110 T-KEGEAVLINSPVYPPFARSV---------RLNNRKLVSNSLKEENGLFQIDFEQLENDIVEN------DVKLYLLCNP 173 (392)
Confidence 6 58899998877765544322 2347777777763 2 2347999999999731 6789999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-------hhc---c---cCCeEEEecccccCc--ceeEEeec
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-------EVC---A---SVDTVMFCLSKGLGA--PVGSILAG 278 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-------~~~---~---~~dv~~~s~sK~l~~--p~gg~~~~ 278 (285)
+||+ |.+++.+++++|+++|++||+++|+||+|..+. .+. . ...+++.|+||+++. .+.|+++.
T Consensus 174 ~npt-G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 252 (392)
T 3b1d_A 174 HNPG-GRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAII 252 (392)
Confidence 9999 889999999999999999999999999988321 111 1 223558999999863 45566665
Q ss_pred C-ccccc
Q psy5413 279 P-EEFIQ 284 (285)
Q Consensus 279 ~-~~~i~ 284 (285)
+ +++++
T Consensus 253 ~~~~~~~ 259 (392)
T 3b1d_A 253 ENPTLCA 259 (392)
Confidence 4 44654
No 203
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.81 E-value=1.6e-19 Score=163.19 Aligned_cols=202 Identities=14% Similarity=0.004 Sum_probs=146.9
Q ss_pred CeeeeeccCCc-CC-CcHHHHHHHHhccc-CCCCccCChhHHHHHHHHHhHc-CCC-------cE--EEcCChHHHHHHH
Q psy5413 66 IRTVDIRSDTI-SK-PTMEMKNYMFNCEV-GDDVYLEDPTCKELQEKAAKLA-GKE-------AA--IFVPSGTMGNLIA 132 (285)
Q Consensus 66 ~~~~~~~~~~~-~~-~~~~v~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~-g~~-------~~--~~~~~Gs~a~~~a 132 (285)
..+++|..+.+ .. +++.+.+++.++.. ....|.......++++.+++++ |.+ .+ ..+.+|++++..+
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~ 120 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIG 120 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHH
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHH
Confidence 46789998886 44 46678888887643 2456766667789999999986 543 23 3588899998876
Q ss_pred HHHc--cccCCCeEEecCCcceeeecccccccccccccccceeeeeeec--CCCCCCCHHHHHHHhcccccccCCceEEE
Q psy5413 133 IMTH--CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN--QKDGTFDLDEMEAKFSTADNIHCASTSLV 208 (285)
Q Consensus 133 l~~~--~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~~~~~v 208 (285)
..++ +.++||+|+++.++|....... ...|.+++.++. .+++.+|++++++++++. ..+++++
T Consensus 121 ~~~~~~~~~~gd~Vlv~~p~y~~~~~~~---------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~~~i 187 (409)
T 4eu1_A 121 GDLLNRFVANCNRIYGPDVGYPNHESIF---------AKAGMELTPYSYYDPATKGLNLAGMLECLDKA----PEGSVIL 187 (409)
T ss_dssp HHHGGGTSSSCCEEEEESSCCTHHHHHH---------HHTTCEEEEECCEETTTTEECHHHHHHHHHHS----CTTCEEE
T ss_pred HHHHHHhcCCCCEEEEeCCCcHhHHHHH---------HHcCCeEEEEEeecCcCCcCcHHHHHHHHHhC----CCCcEEE
Confidence 4332 2357899999988875543322 234888888875 345678999999999741 2256788
Q ss_pred EEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh---------hh----cccCC-eEEEecccccCc--ce
Q psy5413 209 CVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA---------EV----CASVD-TVMFCLSKGLGA--PV 272 (285)
Q Consensus 209 ~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~---------~~----~~~~d-v~~~s~sK~l~~--p~ 272 (285)
++++|+||| |.+++.+++++|+++|++||+++|+||+|..+. .. ....+ +++.|+||.++. .+
T Consensus 188 ~~~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r 266 (409)
T 4eu1_A 188 VHACAHNPT-GVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHR 266 (409)
T ss_dssp EESSSCTTT-CCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGC
T ss_pred EECCCCCCC-CCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCC
Confidence 889999999 899999999999999999999999999987221 11 11234 448999999875 44
Q ss_pred eEE---eecCcc
Q psy5413 273 GSI---LAGPEE 281 (285)
Q Consensus 273 gg~---~~~~~~ 281 (285)
.|+ ++++++
T Consensus 267 iG~~~~v~~~~~ 278 (409)
T 4eu1_A 267 CGALHISTASAE 278 (409)
T ss_dssp CEEEEEECSSHH
T ss_pred ceEEEEEeCCHH
Confidence 466 567766
No 204
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.81 E-value=5.1e-19 Score=164.50 Aligned_cols=194 Identities=13% Similarity=0.042 Sum_probs=143.9
Q ss_pred eeccCCcCCCcHHHHHHHHhcccC-CCCccCChhHHH----HHHHHHhHcCCC-------cEEEcCChHHHHHHHHHHcc
Q psy5413 70 DIRSDTISKPTMEMKNYMFNCEVG-DDVYLEDPTCKE----LQEKAAKLAGKE-------AAIFVPSGTMGNLIAIMTHC 137 (285)
Q Consensus 70 ~~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~~~~~~~----l~~~la~~~g~~-------~~~~~~~Gs~a~~~al~~~~ 137 (285)
.+.+...+.++|.+.+++.+.... ...+...+...+ +++.+++++|.+ ..++++||++|+..++.++.
T Consensus 59 ~l~s~~t~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~ 138 (502)
T 3hbx_A 59 NLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFK 138 (502)
T ss_dssp BTTCCSCCCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHH
T ss_pred eeccccCCCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHH
Confidence 333333355788999998876543 222334455454 455577788877 24679999999999998876
Q ss_pred cc-------CCC-----eEEecCCcceeeecccccccccccccccceeeeeeecCCC-CCCCHHHHHHHhcccccccCCc
Q psy5413 138 DR-------RDS-----EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKD-GTFDLDEMEAKFSTADNIHCAS 204 (285)
Q Consensus 138 ~~-------~g~-----~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~~~~ 204 (285)
.+ +|+ +|+++...|.++..... ..|..++.++.+++ +.+|+++|+++|++ +
T Consensus 139 ~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~---------~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-------~ 202 (502)
T 3hbx_A 139 RKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFAR---------YFEVELKEVKLSEGYYVMDPQQAVDMVDE-------N 202 (502)
T ss_dssp HHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHH---------HTTCEEEEECCBTTBCSCCHHHHHHHCCT-------T
T ss_pred HHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHH---------HcCceeEEEecCCCcCcCCHHHHHHHHhh-------C
Confidence 32 265 79999999987665333 34888888887655 78999999999988 7
Q ss_pred eEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc------CCeEEEeCccCChh-----------hhcccCCeEEEecccc
Q psy5413 205 TSLVCVENTHNYCGGTVLPMQWLRELKARCQEH------NIPVHMDGARLPLA-----------EVCASVDTVMFCLSKG 267 (285)
Q Consensus 205 ~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~------gi~li~Dea~~~~~-----------~~~~~~dv~~~s~sK~ 267 (285)
+++|+++.++|++ |.+.| +++|.++|+++ |+++|+|++|++.. ....++|++.+++||+
T Consensus 203 t~~v~~~~~~n~t-G~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~ 278 (502)
T 3hbx_A 203 TICVAAILGSTLN-GEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKY 278 (502)
T ss_dssp EEEEEEEBSCTTT-CCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTT
T ss_pred CEEEEEecCCCCC-CcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccc
Confidence 8999999999999 89999 99999999999 99999999998321 0124788999999999
Q ss_pred cCcc--eeEEeecCcccc
Q psy5413 268 LGAP--VGSILAGPEEFI 283 (285)
Q Consensus 268 l~~p--~gg~~~~~~~~i 283 (285)
+++| .|++++.+++++
T Consensus 279 l~~p~g~G~~~~~~~~~l 296 (502)
T 3hbx_A 279 GLVYAGIGWVIWRNKEDL 296 (502)
T ss_dssp TCCCSSCEEEEESSGGGS
T ss_pred cCCCCCeEEEEEeCHHHh
Confidence 9663 344566666544
No 205
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.81 E-value=2.9e-20 Score=169.11 Aligned_cols=201 Identities=14% Similarity=-0.023 Sum_probs=146.6
Q ss_pred eeeeeccCCcCCC----cHHHHHHH--HhcccC----CCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHH--HHH
Q psy5413 67 RTVDIRSDTISKP----TMEMKNYM--FNCEVG----DDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGN--LIA 132 (285)
Q Consensus 67 ~~~~~~~~~~~~~----~~~v~~a~--~~~~~~----~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~--~~a 132 (285)
..++|..+.+... ++.+.+++ .+.... ...|+......+|++.++++++.+ .+++++|+++++ ..+
T Consensus 34 ~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~ 113 (427)
T 3ppl_A 34 LKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVI 113 (427)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHH
T ss_pred ceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHH
Confidence 4578887776542 12455555 443332 246666667899999999999864 468899999999 477
Q ss_pred HHHcccc-C----------CCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhccccccc
Q psy5413 133 IMTHCDR-R----------DSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIH 201 (285)
Q Consensus 133 l~~~~~~-~----------g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~ 201 (285)
+++++.. + |++|++++++|....... ...|.+++.++.++++ +|+++|+++++..
T Consensus 114 ~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~---------~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~---- 179 (427)
T 3ppl_A 114 SWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSIT---------ERFGFEMISVPMNEDG-PDMDAVEELVKNP---- 179 (427)
T ss_dssp HHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHH---------HHTTCEEEEEEEETTE-ECHHHHHHHTTST----
T ss_pred HHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHH---------HHcCCEEEEeCCCCCC-CCHHHHHHHHhcC----
Confidence 7776631 4 899999888875543322 2348888888876554 8999999999531
Q ss_pred CCceEEEEEe-cccCCCCeeeCCHHHHHHHHHHH-HHcCCeEEEeCccCCh------------hhh-----cccCCeEEE
Q psy5413 202 CASTSLVCVE-NTHNYCGGTVLPMQWLRELKARC-QEHNIPVHMDGARLPL------------AEV-----CASVDTVMF 262 (285)
Q Consensus 202 ~~~~~~v~i~-~~~n~~gG~~~~~~~l~~i~~la-~~~gi~li~Dea~~~~------------~~~-----~~~~dv~~~ 262 (285)
++++|+++ +++||| |.+++.+++++|+++| ++||+++|+||+|..+ ..+ ..+.++++.
T Consensus 180 --~~~~v~~~p~~~NPt-G~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 256 (427)
T 3ppl_A 180 --QVKGMWVVPVFSNPT-GFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFT 256 (427)
T ss_dssp --TEEEEEECCSSCTTT-CCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEE
T ss_pred --CCeEEEECCCCCCCC-CccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEe
Confidence 78999877 599999 9999999999999999 9999999999998731 111 112345599
Q ss_pred ecccccCc-ceeEEeecCccccc
Q psy5413 263 CLSKGLGA-PVGSILAGPEEFIQ 284 (285)
Q Consensus 263 s~sK~l~~-p~gg~~~~~~~~i~ 284 (285)
|+||+++. .+.|+++.++++++
T Consensus 257 S~SK~~~~G~r~G~~~~~~~l~~ 279 (427)
T 3ppl_A 257 STSKITLAGAGVSFFLTSAENRK 279 (427)
T ss_dssp ESTTTSCTTSSCEEEECCHHHHH
T ss_pred chhhccCcCccEEEEEcCHHHHH
Confidence 99998443 67788888877653
No 206
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.81 E-value=1.6e-19 Score=162.03 Aligned_cols=179 Identities=15% Similarity=0.160 Sum_probs=135.6
Q ss_pred CcHHHHHHHHhcccCCCCcc-CChhHHHHHHHH-HhHcC-CCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeee
Q psy5413 79 PTMEMKNYMFNCEVGDDVYL-EDPTCKELQEKA-AKLAG-KEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLW 155 (285)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~y~-~~~~~~~l~~~l-a~~~g-~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~ 155 (285)
+.+++.+++.+.+... .|. ..+...++++.+ ++++| .+.+++++||++|+..++.++..++||+|+++.+.|..+.
T Consensus 14 ~~~~i~~a~~~~~~~~-~~~~~~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~ 92 (377)
T 3ju7_A 14 PVIEYLDELKEIDASH-IYTNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATP 92 (377)
T ss_dssp CGGGGHHHHHHHHHHT-CCSSSCHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHH
T ss_pred CcHHHHHHHHHHHHcC-CcccCCHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHH
Confidence 4567788877665432 244 367899999999 99999 7888999999999999999873369999999998887654
Q ss_pred cccccccccccccccceeeeeeecC-CCCCCCHHHHHHHh-cccccccCCc--eEEEEEecccCCCCeeeCCHHHHHHHH
Q psy5413 156 EQGGASQTSVYSQIGRVLMRGVTNQ-KDGTFDLDEMEAKF-STADNIHCAS--TSLVCVENTHNYCGGTVLPMQWLRELK 231 (285)
Q Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~~~i-~~~~~~~~~~--~~~v~i~~~~n~~gG~~~~~~~l~~i~ 231 (285)
... ...|.+++.++.+ .++.+|++++++++ ++ + +++|+. +|++ |.+.+ +++|.
T Consensus 93 ~~~---------~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~-------~~~tk~v~~---~~~~-G~~~~---~~~i~ 149 (377)
T 3ju7_A 93 LAA---------IWCGLEPYFIDISIDDWYMDKTVLWDKIEEL-------KEEVAIVVP---YATF-GSWMN---LEEYE 149 (377)
T ss_dssp HHH---------HHTTCEEEEECBCTTTCSBCHHHHHHHHHHH-------GGGEEEECC---BCGG-GBCCC---CHHHH
T ss_pred HHH---------HHcCCEEEEEecCCccCCcCHHHHHHHHhcC-------CCCceEEEE---ECCC-CCccC---HHHHH
Confidence 422 2348888888875 46789999999998 44 4 899884 4455 89999 89999
Q ss_pred HHHHHcCCeEEEeCccC-Chh----hh-cccCCeEEEe--cccccCcceeEEeec-Cccc
Q psy5413 232 ARCQEHNIPVHMDGARL-PLA----EV-CASVDTVMFC--LSKGLGAPVGSILAG-PEEF 282 (285)
Q Consensus 232 ~la~~~gi~li~Dea~~-~~~----~~-~~~~dv~~~s--~sK~l~~p~gg~~~~-~~~~ 282 (285)
++|+ ||++||+|++|+ +.. .. ....|+.++| .+|+++++.||+++. ++++
T Consensus 150 ~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l 208 (377)
T 3ju7_A 150 ELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEED 208 (377)
T ss_dssp HHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHH
T ss_pred HHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHH
Confidence 9999 999999999987 211 11 1225666655 569998877777765 4444
No 207
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.81 E-value=1.5e-19 Score=166.83 Aligned_cols=214 Identities=14% Similarity=0.082 Sum_probs=132.0
Q ss_pred cCCeeeeeccCCc----CCCcHHHHHHHHhccc-----CCCCccC---ChhHHHHHHHHHhHc--CCCcEEEcCChHHHH
Q psy5413 64 VNIRTVDIRSDTI----SKPTMEMKNYMFNCEV-----GDDVYLE---DPTCKELQEKAAKLA--GKEAAIFVPSGTMGN 129 (285)
Q Consensus 64 ~~~~~~~~~~~~~----~~~~~~v~~a~~~~~~-----~~~~y~~---~~~~~~l~~~la~~~--g~~~~~~~~~Gs~a~ 129 (285)
.|++++||.++.+ ++.+|+|.+|+.++.. ....|+. .+...++++.++++. +.+.++|++||++|+
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGseA~ 140 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSCSN 140 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHHHH
T ss_pred CCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchhHH
Confidence 4788999876543 5689999999988753 1123432 233344444455555 566789999999999
Q ss_pred HHHHHHcccc------------------------CC---CeEEe-cCCcceeeeccccccccccccc----ccceeeeee
Q psy5413 130 LIAIMTHCDR------------------------RD---SEIIV-GDCSHIMLWEQGGASQTSVYSQ----IGRVLMRGV 177 (285)
Q Consensus 130 ~~al~~~~~~------------------------~g---~~vi~-~~~~h~~~~~~~~~~~~~~~~~----~~g~~~~~~ 177 (285)
+.|+++++.. +| ++||+ ...||+++.....+.....+.. ..+...+.+
T Consensus 141 ~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 220 (472)
T 1ohv_A 141 ENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPF 220 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECC
T ss_pred HHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCC
Confidence 9999998411 24 56666 4577877654322221000100 001111122
Q ss_pred ecC--C---C--C-----CCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 178 TNQ--K---D--G-----TFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 178 ~~~--~---~--~-----~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~De 245 (285)
|.. + . . ..|+++|+++|+++.. ...++++|++++++|++|..+.+.++|++|+++|++||++||+||
T Consensus 221 p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~-~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DE 299 (472)
T 1ohv_A 221 PRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRK-KKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDE 299 (472)
T ss_dssp CCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CcccCccccccccchhHHHHHHHHHHHHHHhcCC-CCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeC
Confidence 210 0 0 0 1268899999875210 012689999999998884456789999999999999999999999
Q ss_pred ccCChhh-----hcccCCe---E-EEecccc-cCcceeEEeecCccc
Q psy5413 246 ARLPLAE-----VCASVDT---V-MFCLSKG-LGAPVGSILAGPEEF 282 (285)
Q Consensus 246 a~~~~~~-----~~~~~dv---~-~~s~sK~-l~~p~gg~~~~~~~~ 282 (285)
+|+++.. ..+..++ . +.++||+ ++ ||+++ ++++
T Consensus 300 v~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~---GG~~~-~~~~ 342 (472)
T 1ohv_A 300 VQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMT---GGFFH-KEEF 342 (472)
T ss_dssp TTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSS---EEEEE-CGGG
T ss_pred cccCCCCCCCchhccccCCCCCCCEEEEcccccc---CCccC-chhh
Confidence 9884221 1222121 1 5688899 55 45665 5554
No 208
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.81 E-value=7.8e-20 Score=169.59 Aligned_cols=182 Identities=15% Similarity=0.041 Sum_probs=135.7
Q ss_pred CcHHHHHHHHhcccC-----CCCccCChhHH----HHHHHHHhHcCCC----cEEEcCChHHHHHHHHHHcccc----CC
Q psy5413 79 PTMEMKNYMFNCEVG-----DDVYLEDPTCK----ELQEKAAKLAGKE----AAIFVPSGTMGNLIAIMTHCDR----RD 141 (285)
Q Consensus 79 ~~~~v~~a~~~~~~~-----~~~y~~~~~~~----~l~~~la~~~g~~----~~~~~~~Gs~a~~~al~~~~~~----~g 141 (285)
+.+.+.+++.++... ...|...+... ++++.+++++|.+ .+++++||++|+..++++++.. +|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g 155 (497)
T 3mc6_A 76 GGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRG 155 (497)
T ss_dssp CCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSC
T ss_pred CchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCC
Confidence 446666666554331 12233344444 5556677777876 4699999999999999998631 35
Q ss_pred ---CeEEecCCcceeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEEEEEecccCCC
Q psy5413 142 ---SEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYC 217 (285)
Q Consensus 142 ---~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~ 217 (285)
++|+++.++|........ ..|.+++.++.++ ++.+|+++|+++|++ ++++|++++|+|++
T Consensus 156 ~~~~~Vi~~~~~h~~~~~~~~---------~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~p~npt 219 (497)
T 3mc6_A 156 ITEPEIIAPVTAHAGFDKAAY---------YFGMKLRHVELDPTTYQVDLGKVKKFINK-------NTVLLVGSAPNFPH 219 (497)
T ss_dssp CSSCEEEEETTSCHHHHHHHH---------HSCCEEEEECBCTTTCSBCTTTTGGGCCS-------SEEEEEEETTCTTT
T ss_pred CCCceEEEeCCccHHHHHHHH---------HcCCeEEEEecCcccCcCCHHHHHHHHhh-------CCEEEEEECCCCCC
Confidence 789999999877654332 3488889998866 678999999999987 79999999999999
Q ss_pred CeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh----------------hhcccCCeEEEecccccCc-ceeEEeecCc
Q psy5413 218 GGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA----------------EVCASVDTVMFCLSKGLGA-PVGSILAGPE 280 (285)
Q Consensus 218 gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~----------------~~~~~~dv~~~s~sK~l~~-p~gg~~~~~~ 280 (285)
|.+.| +++|+++|++||+++|+|++|++.. ....++|+++.+++|++++ +..|+++.++
T Consensus 220 -G~~~~---l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~ 295 (497)
T 3mc6_A 220 -GIADD---IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRN 295 (497)
T ss_dssp -CCCCS---CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSS
T ss_pred -CcCCC---HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecC
Confidence 89999 9999999999999999999987221 1235689999999999755 3445555443
No 209
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.81 E-value=1.8e-19 Score=164.48 Aligned_cols=179 Identities=13% Similarity=0.073 Sum_probs=138.3
Q ss_pred cHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHcc--------ccCCCeEEecCCcc
Q psy5413 80 TMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHC--------DRRDSEIIVGDCSH 151 (285)
Q Consensus 80 ~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~--------~~~g~~vi~~~~~h 151 (285)
.+++.+++.+.... ..|.+.+...++++.+++++|.+..+++++|++|+..+++++. .++|++|+++.+.|
T Consensus 42 ~~~~~~a~~~~~~~-~~~~~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~ 120 (437)
T 3bb8_A 42 GTKELQLMVEASLD-GWLTTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGF 120 (437)
T ss_dssp CHHHHHHHHHHHHH-CCCBSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSC
T ss_pred CHHHHHHHHHHHHc-CCcCCChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCc
Confidence 57788888766542 3455678899999999999999988999999999999999872 35889999998888
Q ss_pred eeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHH
Q psy5413 152 IMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLREL 230 (285)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i 230 (285)
........ ..|.+++.++.++ ++.+|++++++++++ ++++|++++.. |.+.+ +++|
T Consensus 121 ~~~~~~~~---------~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~~~----g~~~~---~~~i 177 (437)
T 3bb8_A 121 PTTVNPTI---------QNGLIPVFVDVDIPTYNVNASLIEAAVSD-------KTKAIMIAHTL----GNLFD---LAEV 177 (437)
T ss_dssp HHHHHHHH---------HTTCEEEECCEETTTTEECGGGHHHHCCT-------TEEEEEEECGG----GCCCC---HHHH
T ss_pred HHHHHHHH---------HcCCEEEEEeccCccCCcCHHHHHHhcCC-------CCeEEEEeCCC----CChhc---HHHH
Confidence 66543222 3477888887654 577899999999977 78999997622 66677 9999
Q ss_pred HHHHHHcCCeEEEeCccC-Chhh----hcccCCeEEEecc--cccCcceeEEeecCccc
Q psy5413 231 KARCQEHNIPVHMDGARL-PLAE----VCASVDTVMFCLS--KGLGAPVGSILAGPEEF 282 (285)
Q Consensus 231 ~~la~~~gi~li~Dea~~-~~~~----~~~~~dv~~~s~s--K~l~~p~gg~~~~~~~~ 282 (285)
.++|+++|+++|+||+|+ +... .....|+++.|++ |.+++++||+++++++.
T Consensus 178 ~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~ 236 (437)
T 3bb8_A 178 RRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIGTVSFYPAKHITMGEGGAVFTQSAE 236 (437)
T ss_dssp HHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECSTTSSSCCSSCEEEEESCHH
T ss_pred HHHHHHcCCEEEEECccccCceECCeecccccCEEEEECcCCcCCCCCCeEEEEeCCHH
Confidence 999999999999999998 3221 1123688778764 55666788999887554
No 210
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.81 E-value=1.9e-19 Score=163.85 Aligned_cols=177 Identities=12% Similarity=0.055 Sum_probs=127.2
Q ss_pred CccCChhHHHHHHHHHhHc----CCC-----------cEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccccc
Q psy5413 96 VYLEDPTCKELQEKAAKLA----GKE-----------AAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGA 160 (285)
Q Consensus 96 ~y~~~~~~~~l~~~la~~~----g~~-----------~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~ 160 (285)
.|+...+..++++.+++++ |.+ .+++++|+++|+..++++++ ++||+|++..++|.......
T Consensus 73 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~-- 149 (425)
T 2r2n_A 73 QYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLLDEPAYSGTLQSL-- 149 (425)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHHHH--
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC-CCCCEEEEeCCCcHHHHHHH--
Confidence 3444444556777776654 532 46899999999999999987 58999999888775543322
Q ss_pred ccccccccccceeeeeeecCCCCCCCHHHHHHHhccccc-----ccCCceEEEEE-ecccCCCCeeeCCHHHHHHHHHHH
Q psy5413 161 SQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADN-----IHCASTSLVCV-ENTHNYCGGTVLPMQWLRELKARC 234 (285)
Q Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~-----~~~~~~~~v~i-~~~~n~~gG~~~~~~~l~~i~~la 234 (285)
...|.+++.++.+++ .+|+++|++++++... ....++++|++ .+++||| |.+++.+++++|+++|
T Consensus 150 -------~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPt-G~~~~~~~l~~l~~~a 220 (425)
T 2r2n_A 150 -------HPLGCNIINVASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPT-GNSLTSERKKEIYELA 220 (425)
T ss_dssp -------GGGTCEEEEECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTT-CCCCCHHHHHHHHHHH
T ss_pred -------HHcCCEEEEeCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCC-CCcCCHHHHHHHHHHH
Confidence 234888888887544 4899999999973110 01126788877 5699999 8999999999999999
Q ss_pred HHcCCeEEEeCccCCh----------hhhc-ccCCeEEEecccccCc-ceeEEeecCccccc
Q psy5413 235 QEHNIPVHMDGARLPL----------AEVC-ASVDTVMFCLSKGLGA-PVGSILAGPEEFIQ 284 (285)
Q Consensus 235 ~~~gi~li~Dea~~~~----------~~~~-~~~dv~~~s~sK~l~~-p~gg~~~~~~~~i~ 284 (285)
++||+++|+||+|..+ ..+. .+..+++.|+||+++. .+.|+++.++++++
T Consensus 221 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~ 282 (425)
T 2r2n_A 221 RKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIE 282 (425)
T ss_dssp HHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHH
T ss_pred HHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHH
Confidence 9999999999998721 1111 1223558999999974 45678887777654
No 211
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.80 E-value=9e-19 Score=160.64 Aligned_cols=183 Identities=15% Similarity=-0.014 Sum_probs=137.3
Q ss_pred CcHHHHHHHHhcccC-CCCccCChhHH----HHHHHHHhHcCCCc-------EEEcCChHHHHHHHHHHccc-------c
Q psy5413 79 PTMEMKNYMFNCEVG-DDVYLEDPTCK----ELQEKAAKLAGKEA-------AIFVPSGTMGNLIAIMTHCD-------R 139 (285)
Q Consensus 79 ~~~~v~~a~~~~~~~-~~~y~~~~~~~----~l~~~la~~~g~~~-------~~~~~~Gs~a~~~al~~~~~-------~ 139 (285)
.+|.+.+++.+.... ...|...+... ++++.+++++|.+. +++++|||+|+..++.+++. .
T Consensus 54 ~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~ 133 (452)
T 2dgk_A 54 DDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEA 133 (452)
T ss_dssp CCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 567888888866542 23344445544 45555677888652 68999999999999988752 1
Q ss_pred CC-----CeEEecCCcceeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHHHhcccccccCCceEEEEEecc
Q psy5413 140 RD-----SEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEAKFSTADNIHCASTSLVCVENT 213 (285)
Q Consensus 140 ~g-----~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~ 213 (285)
+| ++|++++ +|.++..... ..|.+++.++.++ ++.+|+++|+++|++ ++++|+++++
T Consensus 134 ~G~~~~~~~vi~~~-~h~~~~~~~~---------~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-------~t~~v~~~~~ 196 (452)
T 2dgk_A 134 AGKPTDKPNLVCGP-VQICWHKFAR---------YWDVELREIPMRPGQLFMDPKRMIEACDE-------NTIGVVPTFG 196 (452)
T ss_dssp TTCCCSCCEEEESS-CCHHHHHHHH---------HTTCEEEECCCBTTBCSCCHHHHHHHCCT-------TEEEEECBBS
T ss_pred cCCCCCCcEEEECC-CcHHHHHHHH---------HcCceEEEEecCCCCCeECHHHHHHHHhh-------CCEEEEEEcC
Confidence 44 4788888 8876655333 3488899998765 688999999999987 7899999999
Q ss_pred cCCCCeeeCCHHHHHHHHHHHHHc------CCeEEEeCccCChhh--------h---cccCCeEEEecccccCc-ceeEE
Q psy5413 214 HNYCGGTVLPMQWLRELKARCQEH------NIPVHMDGARLPLAE--------V---CASVDTVMFCLSKGLGA-PVGSI 275 (285)
Q Consensus 214 ~n~~gG~~~~~~~l~~i~~la~~~------gi~li~Dea~~~~~~--------~---~~~~dv~~~s~sK~l~~-p~gg~ 275 (285)
+|++ |.+.| +++|+++|++| |+|+|+|++|+.... . ..++|++++++||++.+ +..|+
T Consensus 197 ~n~t-G~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~ 272 (452)
T 2dgk_A 197 VTYT-GNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGW 272 (452)
T ss_dssp CTTT-CBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred CcCC-cccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEE
Confidence 9999 89999 99999999995 999999999984211 1 23678889999998755 45566
Q ss_pred eec-Cccc
Q psy5413 276 LAG-PEEF 282 (285)
Q Consensus 276 ~~~-~~~~ 282 (285)
++. ++++
T Consensus 273 ~~~~~~~~ 280 (452)
T 2dgk_A 273 VIWRDEEA 280 (452)
T ss_dssp EEESSGGG
T ss_pred EEEcCHHH
Confidence 655 4444
No 212
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.80 E-value=8.7e-19 Score=157.46 Aligned_cols=180 Identities=17% Similarity=0.122 Sum_probs=136.2
Q ss_pred CcHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHc------cccCCCeEEecCCcce
Q psy5413 79 PTMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTH------CDRRDSEIIVGDCSHI 152 (285)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~------~~~~g~~vi~~~~~h~ 152 (285)
.++++.+++.+.... ..|...+...++++.+++++|.+..+++++|++|+..+++++ ..++|++|+++.+.|.
T Consensus 13 ~~~~~~~a~~~~~~~-~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~ 91 (390)
T 3b8x_A 13 WDDLEYKAIQSVLDS-KMFTMGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWS 91 (390)
T ss_dssp CCHHHHHHHHHHHHH-TCCSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCH
T ss_pred CCHHHHHHHHHHHHc-CCCCCChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcH
Confidence 577888888776643 235567889999999999999988899999999999999997 1357899999888876
Q ss_pred eeecccccccccccccccceeeeeeecCCC-CCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHH
Q psy5413 153 MLWEQGGASQTSVYSQIGRVLMRGVTNQKD-GTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELK 231 (285)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~ 231 (285)
...... ...|.+++.++.+++ +.+|+++|++++++ ++++|+++++. |.+.+ +++|.
T Consensus 92 ~~~~~~---------~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~~~----g~~~~---~~~i~ 148 (390)
T 3b8x_A 92 TTYYPL---------QQYGLRVKFVDIDINTLNIDIESLKEAVTD-------STKAILTVNLL----GNPNN---FDEIN 148 (390)
T ss_dssp HHHHHH---------HHTTCEEEEECBCTTTCSBCHHHHHHHCCT-------TEEEEEEECGG----GCCCC---HHHHH
T ss_pred HHHHHH---------HHcCCEEEEEecCccccCcCHHHHHHHhCc-------CCeEEEEECCc----cChhh---HHHHH
Confidence 654422 234788888887654 78999999999987 78999997533 67777 99999
Q ss_pred HHHHHcCCeEEEeCccC-Chhhhc--ccC--CeEEEe--cccccCcceeEEeecCc-cc
Q psy5413 232 ARCQEHNIPVHMDGARL-PLAEVC--ASV--DTVMFC--LSKGLGAPVGSILAGPE-EF 282 (285)
Q Consensus 232 ~la~~~gi~li~Dea~~-~~~~~~--~~~--dv~~~s--~sK~l~~p~gg~~~~~~-~~ 282 (285)
++|++||+++|+|++|+ +..... .+. |+.+++ .+|.++++.||+++.++ ++
T Consensus 149 ~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l 207 (390)
T 3b8x_A 149 KIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFSSFYSNHIATMEGGCIVTDDEEI 207 (390)
T ss_dssp HHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHH
T ss_pred HHHHHcCCEEEEECcCcccCEECCcccccccceEEEEccCCCCCccCCceEEEeCCHHH
Confidence 99999999999999998 322211 122 444433 35666556778888765 44
No 213
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.80 E-value=9.2e-20 Score=165.72 Aligned_cols=199 Identities=15% Similarity=0.007 Sum_probs=144.3
Q ss_pred eeeeccCCcC----CCcHHHHHHHHhcc---cC--CCCccCChhHHHHHHHHHhHcCCC--cEEEcCChHHHH--HHHHH
Q psy5413 68 TVDIRSDTIS----KPTMEMKNYMFNCE---VG--DDVYLEDPTCKELQEKAAKLAGKE--AAIFVPSGTMGN--LIAIM 134 (285)
Q Consensus 68 ~~~~~~~~~~----~~~~~v~~a~~~~~---~~--~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~Gs~a~--~~al~ 134 (285)
+++|..+.+. ..++.+.+++.+.. .+ ...|.......+|++.++++++.+ .+++++|+++++ ..++.
T Consensus 34 ~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~ 113 (422)
T 3d6k_A 34 SLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISW 113 (422)
T ss_dssp CEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHH
T ss_pred eEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHH
Confidence 5888888775 34557888876553 12 236766666899999999999865 468888888887 55666
Q ss_pred HccccC------------CCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccC
Q psy5413 135 THCDRR------------DSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHC 202 (285)
Q Consensus 135 ~~~~~~------------g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~ 202 (285)
++. .+ +++|+++.++|....... ...|.+++.++.++++ +|+++|++++++.
T Consensus 114 ~l~-~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~---------~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~----- 177 (422)
T 3d6k_A 114 SYT-WGNNDSSRPWSAEEKVKWLCPVPGYDRHFTIT---------EHFGFEMINVPMTDEG-PDMGVVRELVKDP----- 177 (422)
T ss_dssp HHH-HCCTTCSSCGGGSSCCEEEEEESCCHHHHHHH---------HHHTCEEEEEEEETTE-ECHHHHHHHHTST-----
T ss_pred Hhc-CcccccccccccCCCCEEEEeCCccHHHHHHH---------HHcCCEEEecCCCCCC-CCHHHHHHHHhcC-----
Confidence 655 34 336888877765443321 2348888888875554 8999999999752
Q ss_pred CceEEEE-EecccCCCCeeeCCHHHHHHHHHHHH-HcCCeEEEeCccCC--hh-------hh--------cccCCeEEEe
Q psy5413 203 ASTSLVC-VENTHNYCGGTVLPMQWLRELKARCQ-EHNIPVHMDGARLP--LA-------EV--------CASVDTVMFC 263 (285)
Q Consensus 203 ~~~~~v~-i~~~~n~~gG~~~~~~~l~~i~~la~-~~gi~li~Dea~~~--~~-------~~--------~~~~dv~~~s 263 (285)
++++|+ +++++||| |.+++.+++++|+++|+ +||+++|+||+|.. +. .+ .....+++.|
T Consensus 178 -~~~~v~~~~~~~NPt-G~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 255 (422)
T 3d6k_A 178 -QVKGMWTVPVFGNPT-GVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSS 255 (422)
T ss_dssp -TEEEEEECCSSCTTT-CCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEE
T ss_pred -CCeEEEEcCCCCCCC-CCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcC
Confidence 688888 57799999 89999999999999999 99999999999861 21 11 1122355999
Q ss_pred cccccC-cceeEEeecCccccc
Q psy5413 264 LSKGLG-APVGSILAGPEEFIQ 284 (285)
Q Consensus 264 ~sK~l~-~p~gg~~~~~~~~i~ 284 (285)
+||+++ |.+.|+++.++++++
T Consensus 256 ~SK~~~~GlriG~~~~~~~l~~ 277 (422)
T 3d6k_A 256 TSKITHAGSGVSFFASSKENIE 277 (422)
T ss_dssp STTTSCTTSSCEEEECCHHHHH
T ss_pred hhhhcCcccceEEEEeCHHHHH
Confidence 999733 356788888877654
No 214
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.79 E-value=1e-19 Score=161.13 Aligned_cols=185 Identities=11% Similarity=0.075 Sum_probs=132.9
Q ss_pred cCCCcHHHHHHHHhcccCCC--C--cc--CChhHHHHHHHHHhHcCCC---cEEEcCChHHHHHHHHHHccccCCCeEEe
Q psy5413 76 ISKPTMEMKNYMFNCEVGDD--V--YL--EDPTCKELQEKAAKLAGKE---AAIFVPSGTMGNLIAIMTHCDRRDSEIIV 146 (285)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~--~--y~--~~~~~~~l~~~la~~~g~~---~~~~~~~Gs~a~~~al~~~~~~~g~~vi~ 146 (285)
+...++++++++.+...... . +. ..+...++++.+++++|.. .+++++||++|+..++.++. ++ +.+++
T Consensus 12 p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~-~~-~~i~~ 89 (362)
T 3ffr_A 12 PSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV-EK-KSFHC 89 (362)
T ss_dssp SCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC-SS-EEEEE
T ss_pred CcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc-CC-cEEEE
Confidence 35567788866655443211 1 11 1244678899999998763 36899999999999999987 35 43444
Q ss_pred cCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHH
Q psy5413 147 GDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQW 226 (285)
Q Consensus 147 ~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~ 226 (285)
..++|... ..... ...|.+++.++.++++.+|+++|+ +++ ++++|++++++|++ |.++|
T Consensus 90 ~~~~~~~~--~~~~~------~~~g~~~~~v~~~~~~~~d~~~l~--~~~-------~~~~v~~~~~~npt-G~~~~--- 148 (362)
T 3ffr_A 90 VNGSFSKR--FYEFA------GELGREAYKEEAAFGKGFYPADIT--VPA-------DAEIICLTHNETSS-GVSMP--- 148 (362)
T ss_dssp ECSHHHHH--HHHHH------HHTTCEEEEEECCTTCCCCGGGCC--CCT-------TCCEEEEESEETTT-TEECC---
T ss_pred cCcHHHHH--HHHHH------HHhCCCeEEEecCCCCCCCHHHHh--ccC-------CccEEEEEcCCCCc-ceeCC---
Confidence 44444311 11122 345888888888677788999988 555 79999999999999 99999
Q ss_pred HHHHHHHHHHc-CCeEEEeCccCChh-hh-cccCCeEEEecccccCc-ceeEEeecCcccc
Q psy5413 227 LRELKARCQEH-NIPVHMDGARLPLA-EV-CASVDTVMFCLSKGLGA-PVGSILAGPEEFI 283 (285)
Q Consensus 227 l~~i~~la~~~-gi~li~Dea~~~~~-~~-~~~~dv~~~s~sK~l~~-p~gg~~~~~~~~i 283 (285)
+++|.++|++| |+++|+|+++.... .. ...+|+++.++||++++ +-.|+++.+++++
T Consensus 149 l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~ 209 (362)
T 3ffr_A 149 VEDINTFRDKNKDALIFVDAVSSLPYPKFDWTKIDSVFFSVQKCFGLPAGLGVWILNDRVI 209 (362)
T ss_dssp HHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTSCSEEEEETTSTTCCCSCCEEEEEEHHHH
T ss_pred HHHHHHHHHhCCCCEEEEecccccCCcccChhHCcEEEEecccccCCCCceEEEEECHHHH
Confidence 99999999999 99999999988211 11 12389999999999995 4447777777654
No 215
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.79 E-value=2.2e-19 Score=158.10 Aligned_cols=186 Identities=13% Similarity=0.075 Sum_probs=136.3
Q ss_pred eeeeeccCCcC-CCcHHHHHHHHhccc--CCCCccCChhHHHHHHHHHhHcC---C--CcEEEcCChHHHHHHHHHHccc
Q psy5413 67 RTVDIRSDTIS-KPTMEMKNYMFNCEV--GDDVYLEDPTCKELQEKAAKLAG---K--EAAIFVPSGTMGNLIAIMTHCD 138 (285)
Q Consensus 67 ~~~~~~~~~~~-~~~~~v~~a~~~~~~--~~~~y~~~~~~~~l~~~la~~~g---~--~~~~~~~~Gs~a~~~al~~~~~ 138 (285)
++++|.++... .+++++.+++.+... +...|.. +...++++.++++++ . +.+++++||++++..+++++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~-- 96 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF-- 96 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--
Confidence 56889876664 468899999988762 2334543 348899999999998 4 45789999999999999986
Q ss_pred cCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCC
Q psy5413 139 RRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCG 218 (285)
Q Consensus 139 ~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~g 218 (285)
|++|+++ ++|...... . ...|.+++.++.++++.+|++++ + ++++|++++|+|||
T Consensus 97 --gd~Vl~~-p~y~~~~~~---~------~~~g~~~~~v~~~~~~~~d~~~l-----~-------~~~~v~l~~p~npt- 151 (335)
T 1uu1_A 97 --DRSVFFP-PTYSCYRIF---A------KAVGAKFLEVPLTKDLRIPEVNV-----G-------EGDVVFIPNPNNPT- 151 (335)
T ss_dssp --SEEEECS-SSCHHHHHH---H------HHHTCEEEECCCCTTSCCCCCCC-----C-------TTEEEEEESSCTTT-
T ss_pred --CCcEEEC-CCcHHHHHH---H------HHcCCeEEEeccCCCCCCCHHHc-----C-------CCCEEEEeCCCCCC-
Confidence 7889988 776544321 1 23478888888755556776665 3 67999999999999
Q ss_pred eeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh-----hhhcc--cCCeEEEecccccCc--ceeEEeecCccccc
Q psy5413 219 GTVLPMQWLRELKARCQEHNIPVHMDGARLPL-----AEVCA--SVDTVMFCLSKGLGA--PVGSILAGPEEFIQ 284 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~gi~li~Dea~~~~-----~~~~~--~~dv~~~s~sK~l~~--p~gg~~~~~~~~i~ 284 (285)
|.++|.+++++|+++| | ++|+||+|..+ ..... ..++++.|+||+++. .+.|+++.++++++
T Consensus 152 G~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 222 (335)
T 1uu1_A 152 GHVFEREEIERILKTG---A-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFID 222 (335)
T ss_dssp CCCCCHHHHHHHHHTT---C-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHH
T ss_pred CCCCCHHHHHHHHHhC---C-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHH
Confidence 8999976666666655 8 89999998732 22112 234669999999873 45677777777653
No 216
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.79 E-value=5.8e-19 Score=163.97 Aligned_cols=177 Identities=12% Similarity=0.115 Sum_probs=128.8
Q ss_pred CCccCChhHHHHHHHHHhHc-----CC----CcEEEcCChHHHHHHHHHHccccCCC----eEEecCCcceeeecccccc
Q psy5413 95 DVYLEDPTCKELQEKAAKLA-----GK----EAAIFVPSGTMGNLIAIMTHCDRRDS----EIIVGDCSHIMLWEQGGAS 161 (285)
Q Consensus 95 ~~y~~~~~~~~l~~~la~~~-----g~----~~~~~~~~Gs~a~~~al~~~~~~~g~----~vi~~~~~h~~~~~~~~~~ 161 (285)
..|.......++++.+++++ |. +.+++++|+++++..++.+++ .+|+ .|+++.+.|.......
T Consensus 123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~~~d~Vlv~~p~y~~~~~~~--- 198 (498)
T 3ihj_A 123 GSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV-SGGGKSRTGVMIPIPQYPLYSAVI--- 198 (498)
T ss_dssp -----CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC-CCCGGGSEEEEEEESCCTHHHHHH---
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc-CCCCCCCCEEEEeCCCchhHHHHH---
Confidence 45766666777888888775 33 456999999999999999887 4654 8999888876543322
Q ss_pred cccccccccceeeeeeecCC--CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCC
Q psy5413 162 QTSVYSQIGRVLMRGVTNQK--DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNI 239 (285)
Q Consensus 162 ~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi 239 (285)
...|.+++.++.++ ++.+|+++|++++++... ..++++|++++|+||| |.+++.+++++|+++|++||+
T Consensus 199 ------~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~--~~~~k~i~l~np~NPT-G~v~s~~~l~~i~~la~~~~~ 269 (498)
T 3ihj_A 199 ------SELDAIQVNYYLDEENCWALNVNELRRAVQEAKD--HCDPKVLCIINPGNPT-GQVQSRKCIEDVIHFAWEEKL 269 (498)
T ss_dssp ------HHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTT--TSEEEEEEEESSCTTT-CCCCCHHHHHHHHHHHHHHTC
T ss_pred ------HHcCCEEEEeeccccccCCCCHHHHHHHHHhhhc--cCCCeEEEEECCCCCC-CCcCCHHHHHHHHHHHHHcCc
Confidence 23478888887654 357899999999976311 1258999999999999 999999999999999999999
Q ss_pred eEEEeCccCCh-----------hhhc--------ccCCe-EEEeccccc-C--cceeEEee---cCccccc
Q psy5413 240 PVHMDGARLPL-----------AEVC--------ASVDT-VMFCLSKGL-G--APVGSILA---GPEEFIQ 284 (285)
Q Consensus 240 ~li~Dea~~~~-----------~~~~--------~~~dv-~~~s~sK~l-~--~p~gg~~~---~~~~~i~ 284 (285)
++|+||+|..+ ..+. ....+ ++.|+||.+ | |.++|+++ .++++++
T Consensus 270 ~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~ 340 (498)
T 3ihj_A 270 FLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKG 340 (498)
T ss_dssp EEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHH
T ss_pred EEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHH
Confidence 99999998721 1111 11223 488999998 3 57788886 5666553
No 217
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.78 E-value=1.1e-18 Score=158.01 Aligned_cols=200 Identities=11% Similarity=0.043 Sum_probs=144.8
Q ss_pred CeeeeeccCCc---C---CCcHHHHHHHHhcc---cCCCCccCChhHHHHHHHHHhHc-CC-------Cc--EEEcCChH
Q psy5413 66 IRTVDIRSDTI---S---KPTMEMKNYMFNCE---VGDDVYLEDPTCKELQEKAAKLA-GK-------EA--AIFVPSGT 126 (285)
Q Consensus 66 ~~~~~~~~~~~---~---~~~~~v~~a~~~~~---~~~~~y~~~~~~~~l~~~la~~~-g~-------~~--~~~~~~Gs 126 (285)
..+++|+.+.+ . ...+.+.++.. .. .+...|.+..+..+|++.+++++ +. +. ++.+.+|+
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~ 107 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGT 107 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHH
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchH
Confidence 35688887753 1 24568888765 32 13457887788899999999986 21 22 37889999
Q ss_pred HHHHHHHHHccc-cCCCeEEecCCcceeeecccccccccccccccceeeeeeec-C-CCCCCCHHHHHHHhcccccccCC
Q psy5413 127 MGNLIAIMTHCD-RRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN-Q-KDGTFDLDEMEAKFSTADNIHCA 203 (285)
Q Consensus 127 ~a~~~al~~~~~-~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~d~~~l~~~i~~~~~~~~~ 203 (285)
+|+..++.++.. .+ |+|+++++++....... ...|.+++.++. + .++.+|++++++++++. .
T Consensus 108 ~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~---------~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-----~ 172 (405)
T 3k7y_A 108 GAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMI---------ESRGFNLKYINFFDYNLIDINYDLFLNDLRNI-----P 172 (405)
T ss_dssp HHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHH---------HTTTCEEEEECCEETTTTEECHHHHHHHHHHS-----C
T ss_pred HHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHH---------HHcCCeEEEEeccccccCCcCHHHHHHHHHhC-----C
Confidence 999999988763 16 99999988875544322 244888888886 2 24678999999999751 1
Q ss_pred ceEEEEEecc-cCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh------------hcc-cCCeE-EEeccccc
Q psy5413 204 STSLVCVENT-HNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE------------VCA-SVDTV-MFCLSKGL 268 (285)
Q Consensus 204 ~~~~v~i~~~-~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~------------~~~-~~dv~-~~s~sK~l 268 (285)
++++|+++++ |||| |.+++.+++++|+++|++||+++|+||+|..+.. +.. +..++ +.|+||.+
T Consensus 173 ~~~~i~l~~~~~NPT-G~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 251 (405)
T 3k7y_A 173 NGSSVILQISCYNPC-SVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNM 251 (405)
T ss_dssp SSCEEEECCSSCTTT-CCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTS
T ss_pred CCeEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccC
Confidence 4678888775 8999 9999999999999999999999999999873221 112 22344 89999998
Q ss_pred C--cceeEEee---cCccc
Q psy5413 269 G--APVGSILA---GPEEF 282 (285)
Q Consensus 269 ~--~p~gg~~~---~~~~~ 282 (285)
+ |.+.|+++ .++++
T Consensus 252 ~l~GlRiG~~~~~~~~~~~ 270 (405)
T 3k7y_A 252 SLYGERAGALHIVCKNQEE 270 (405)
T ss_dssp CCTTTTEEEEEEECSSHHH
T ss_pred CCccccceEEEEEeCCHHH
Confidence 7 46777753 35543
No 218
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.76 E-value=2.6e-18 Score=154.01 Aligned_cols=167 Identities=14% Similarity=0.139 Sum_probs=123.3
Q ss_pred hhHHHHHHHHHhHcCCCc-EEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecccccccccccccccc--eeeeee
Q psy5413 101 PTCKELQEKAAKLAGKEA-AIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGR--VLMRGV 177 (285)
Q Consensus 101 ~~~~~l~~~la~~~g~~~-~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g--~~~~~~ 177 (285)
+...++++.+++++|.+. .+|++|||+|+++++.. + .+||+|++.+..|.... ...+. ...| .+++.+
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~-~-~~gd~vi~~~~~~~~~~-~~~~~------~~~g~~~~~~~~ 105 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQ-L-TIDEDCLIIRNGWFSYR-WTQIL------EKGKFAKSSTVL 105 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHH-H-CTTCEEEEEECSHHHHH-HHHHH------HHHCCSSEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHh-C-CCCCeEEEEeCCchhHH-HHHHH------HHhCCCCceEEE
Confidence 356788899999998865 47889999999999865 4 48999888765543221 11121 1223 355555
Q ss_pred ecCC---------CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 178 TNQK---------DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 178 ~~~~---------~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
+.++ ...+|++++++++++. ++++|++.+++|++ |.++|.+++++|+++|++||+++|+|++++
T Consensus 106 ~~~~~g~~~~~~~~~~~d~~~l~~~i~~~------~~~~v~~~~~~~~~-G~~~~~~~l~~i~~~~~~~~~~li~D~~~~ 178 (379)
T 3ke3_A 106 TAERTEDTEAPKPFAPVDIETAVAKIKED------KSAIVYAPHVETSS-GIILSEEYIKALSEAVHSVGGLLVIDCIAS 178 (379)
T ss_dssp ECEESSCCSSCCCEECCCHHHHHHHHHHH------TCSEEEEESEETTT-TEECCHHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred eccccccccccCCCCCCCHHHHHHHHhhc------CCcEEEEEeecCCC-ceeCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 5422 1257999999999642 67899999999998 899999999999999999999999999987
Q ss_pred Chh---hhcccCCeEEEecccccCcce-eEEeecCcccc
Q psy5413 249 PLA---EVCASVDTVMFCLSKGLGAPV-GSILAGPEEFI 283 (285)
Q Consensus 249 ~~~---~~~~~~dv~~~s~sK~l~~p~-gg~~~~~~~~i 283 (285)
+.. ....++|+++.+++|++++|. .|+++.+++++
T Consensus 179 g~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~ 217 (379)
T 3ke3_A 179 GCVWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAI 217 (379)
T ss_dssp TTCCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHH
T ss_pred CCccccccccCCCEEEecchhhcCCCCceEEEEECHHHH
Confidence 211 112478999999999998854 47777777654
No 219
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.75 E-value=4.4e-18 Score=156.34 Aligned_cols=166 Identities=20% Similarity=0.166 Sum_probs=123.0
Q ss_pred hHHHHHHHHHhHcCCCc-EEEcCChH-HHHHHHHHHccc-cCCCeEEecCCcceeeecccccccccccccccceeeeeee
Q psy5413 102 TCKELQEKAAKLAGKEA-AIFVPSGT-MGNLIAIMTHCD-RRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVT 178 (285)
Q Consensus 102 ~~~~l~~~la~~~g~~~-~~~~~~Gs-~a~~~al~~~~~-~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~ 178 (285)
...++++.+++++|.+. ++++++|+ .++..++.++.. .+++.|+++...|.+...... ..|.+++.++
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~---------~~G~~~~~v~ 204 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVS---------FVGMNMRLVE 204 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH---------HTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHH---------HcCCCceEEE
Confidence 35678899999999875 78999999 577767776542 156678878888877655322 3477777766
Q ss_pred c---CCCCCCCHHHHHHHh-cccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh----
Q psy5413 179 N---QKDGTFDLDEMEAKF-STADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL---- 250 (285)
Q Consensus 179 ~---~~~~~~d~~~l~~~i-~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~---- 250 (285)
. ++++.+|+++|+++| ++. ...++.+|+++.++|++ |.+.| +++|+++|+++|+++|+||+|+..
T Consensus 205 ~~~~~~~~~~d~~~l~~~i~~~~---~~~~~~~vv~~~~nn~t-G~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~ 277 (456)
T 2z67_A 205 TVLDGDRVYVPVEDIENAIKKEI---ELGNRPCVLSTLTFFPP-RNSDD---IVEIAKICENYDIPHIINGAYAIQNNYY 277 (456)
T ss_dssp CEEETTEEECCHHHHHHHHHHHH---HTTCCEEEEEESSCCTT-BCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHH
T ss_pred EeccCCCCCcCHHHHHHHHHHHh---hCCCeEEEEEeCCCCCC-CCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHh
Confidence 4 456789999999999 420 01167888899999999 99999 999999999999999999997721
Q ss_pred hhh-----cccCCeEEEecccccCcc-eeEEeec-Ccccc
Q psy5413 251 AEV-----CASVDTVMFCLSKGLGAP-VGSILAG-PEEFI 283 (285)
Q Consensus 251 ~~~-----~~~~dv~~~s~sK~l~~p-~gg~~~~-~~~~i 283 (285)
... ..++|++++++||++++| .+|+++. +++++
T Consensus 278 ~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~ 317 (456)
T 2z67_A 278 LEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFI 317 (456)
T ss_dssp HHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCHHHH
T ss_pred hHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCHHHH
Confidence 111 117899999999997764 4566666 55554
No 220
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.75 E-value=2e-18 Score=158.24 Aligned_cols=162 Identities=17% Similarity=0.176 Sum_probs=119.6
Q ss_pred CccCChhHHHHHHHHHhHcCCCc-EEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecccccccccccccccceee
Q psy5413 96 VYLEDPTCKELQEKAAKLAGKEA-AIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLM 174 (285)
Q Consensus 96 ~y~~~~~~~~l~~~la~~~g~~~-~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~ 174 (285)
.+.+.....++++.+++ +|.+. .++++||++|+..++++++ ++|++|+++.++|.+....... .|.++
T Consensus 52 ~~~~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~-~~gd~Vlv~~~~h~s~~~~~~~---------~G~~~ 120 (446)
T 2x3l_A 52 LHHPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFS-QKKGDILMARNVHKSVLHALDI---------SQQEG 120 (446)
T ss_dssp TTSCSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTT-TSSSCEEECTTCCHHHHHHHHH---------HTCCE
T ss_pred ccCcchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhc-CCCCEEEEecCccHHHHHHHHH---------cCCeE
Confidence 44556678999999999 99865 4677778899999999987 5899999999998766543222 37777
Q ss_pred eeeec--CCC----CCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 175 RGVTN--QKD----GTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 175 ~~~~~--~~~----~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
+.++. +++ +.+|+++| +.+ ++++|+++++++ + |.++| +++|+++|++||+++|+||+|+
T Consensus 121 ~~v~~~~~~~~~~~~~~d~~~l---~~~-------~~~~v~~~~~n~-~-G~~~~---l~~I~~l~~~~~~~livDea~~ 185 (446)
T 2x3l_A 121 HFIETHQSPLTNHYNKVNLSRL---NND-------GHKLVVLTYPNY-Y-GETFN---VEEVIKSLHQLNIPVLIDEAHG 185 (446)
T ss_dssp EECEEEECTTTSSEEEEEC-----------------CCEEEEESSCT-T-SCCCC---HHHHHHHHHHTTCCEEEECTTC
T ss_pred EEEeCeeccccCcCCCCCHHHH---cCC-------CceEEEEECCCC-C-eEecC---HHHHHHHHHhcCCeEEEcchhh
Confidence 77765 443 45677777 334 689999999554 6 89999 9999999999999999999987
Q ss_pred C-h-------hhhcccCCeEEEecccccCc-ceeEEeecCcccc
Q psy5413 249 P-L-------AEVCASVDTVMFCLSKGLGA-PVGSILAGPEEFI 283 (285)
Q Consensus 249 ~-~-------~~~~~~~dv~~~s~sK~l~~-p~gg~~~~~~~~i 283 (285)
. + .....++|+++.|+||++++ ..+|++..+++++
T Consensus 186 ~~~~f~~~~~~~~~~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i 229 (446)
T 2x3l_A 186 AHFGLQGFPDSTLNYQADYVVQSFHKTLPALTMGSVLYIHKNAP 229 (446)
T ss_dssp TTTTSTTSCCCGGGGTCSEEEECHHHHSSSCTTCEEEEEETTCT
T ss_pred hhhccCCCCCChHHcCCCEEEECCccccccccccEEEEEcCCcC
Confidence 4 1 11223679999999998877 3457777766654
No 221
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.74 E-value=1.2e-18 Score=154.35 Aligned_cols=189 Identities=10% Similarity=0.107 Sum_probs=131.7
Q ss_pred eeeeccCCcCCCcHHHHHHHHhcccC-----CCCcc-------CChhHHHHHHHHHhHcCCC---cEEEcCCh-HHHHHH
Q psy5413 68 TVDIRSDTISKPTMEMKNYMFNCEVG-----DDVYL-------EDPTCKELQEKAAKLAGKE---AAIFVPSG-TMGNLI 131 (285)
Q Consensus 68 ~~~~~~~~~~~~~~~v~~a~~~~~~~-----~~~y~-------~~~~~~~l~~~la~~~g~~---~~~~~~~G-s~a~~~ 131 (285)
++++..+. ...++.+++++.+.... ...|. ..+...++++.+++++|.+ .+++++|+ ++|+..
T Consensus 4 ~~~~~~g~-~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~ 82 (360)
T 1w23_A 4 VFNFNAGP-SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTM 82 (360)
T ss_dssp CEECCSSS-CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred eEeecCCC-cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHH
Confidence 45555554 46788999999877642 11221 2234778999999999975 45788887 999999
Q ss_pred HHHHcccc--CCCeEEecCCcceeeecccccccccccccccceeeeeeecCC-CCCCCHHHHHH-HhcccccccCCceEE
Q psy5413 132 AIMTHCDR--RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK-DGTFDLDEMEA-KFSTADNIHCASTSL 207 (285)
Q Consensus 132 al~~~~~~--~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~-~i~~~~~~~~~~~~~ 207 (285)
++..+..+ +|+.|+++..+|.+.. .. ...| +++.++.++ ++.+|++++++ ++++ ++++
T Consensus 83 ~~~~l~~~~~~g~~vi~~~~~~~~~~----~~------~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~-------~~k~ 144 (360)
T 1w23_A 83 LPMNLLTKGTIGNYVLTGSWSEKALK----EA------KLLG-ETHIAASTKANSYQSIPDFSEFQLNE-------NDAY 144 (360)
T ss_dssp HHHHHCCTTCEEEEEECSHHHHHHHH----HH------HTTS-EEEEEEECGGGTSCSCCCGGGCCCCT-------TEEE
T ss_pred HHHHhcCCCCcccEEEecchhHHHHH----HH------HHhC-CeEEeecccccCcCCccchHhhccCC-------CCCE
Confidence 99887641 2455666666664321 12 2347 888888754 55578888988 7865 7999
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-h-hcccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-E-VCASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-~-~~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
|++++++||+ |.+++ +|. ++||+++|+||+|+... . -....|+++.|+||+++.+..|+++.++++++
T Consensus 145 v~~~~~~npt-G~~~~--~i~------~~~~~~li~D~a~~~~~~~~~~~~~di~~~s~sK~~~~~G~G~~~~~~~~~~ 214 (360)
T 1w23_A 145 LHITSNNTIY-GTQYQ--NFP------EINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLN 214 (360)
T ss_dssp EEEESEETTT-TEECS--SCC------CCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHC
T ss_pred EEEeCCCCCc-ceecc--ccc------ccCCceEEEechhhcCCCCcCcccCCEEEEEcccccCCCCcEEEEEcHHHHh
Confidence 9999999999 88877 233 28999999999988211 1 11234899999999998543377777776654
No 222
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.72 E-value=1.4e-17 Score=160.18 Aligned_cols=168 Identities=11% Similarity=0.118 Sum_probs=122.4
Q ss_pred CccCChhHHHHHHHHHhHcCCCcEEEcCCh-HHHHHHHHHHccccCCCeEEecCCcceeeecc-ccccccccccccccee
Q psy5413 96 VYLEDPTCKELQEKAAKLAGKEAAIFVPSG-TMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQ-GGASQTSVYSQIGRVL 173 (285)
Q Consensus 96 ~y~~~~~~~~l~~~la~~~g~~~~~~~~~G-s~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~-~~~~~~~~~~~~~g~~ 173 (285)
.+++.....++++.+++++|.+..+++.+| ++|+.+++.+++ ++||+|+++.+.|.+.... ..+ .|.+
T Consensus 168 l~~~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~-~pGD~VLv~~~~H~S~~~~~~~l---------~Ga~ 237 (730)
T 1c4k_A 168 LLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALV-SNGDLVLFDRNNHKSVYNSALAM---------AGGR 237 (730)
T ss_dssp TTTTBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHTTT---------TCCE
T ss_pred ccCChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHH---------CCCE
Confidence 444556789999999999999987666666 589999999887 6999999999999776553 223 3777
Q ss_pred eeeeecCCC-----CCCCHHHH-----HHHhccc-cc-ccCCce-EEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCe
Q psy5413 174 MRGVTNQKD-----GTFDLDEM-----EAKFSTA-DN-IHCAST-SLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIP 240 (285)
Q Consensus 174 ~~~~~~~~~-----~~~d~~~l-----~~~i~~~-~~-~~~~~~-~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~ 240 (285)
++.++...+ +.+|+++| +++|+++ .+ .+..++ ++|++++|+ ++ |.+.| +++|+++|++||++
T Consensus 238 ~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn-~~-G~v~d---l~~I~~la~~~g~~ 312 (730)
T 1c4k_A 238 PVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGT-YD-GTIYN---AHEVVKRIGHLCDY 312 (730)
T ss_dssp EEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC-TT-SEEEC---HHHHHHHHGGGBSE
T ss_pred EEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCC-CC-CeecC---HHHHHHHHHHcCCe
Confidence 776654221 23577777 8888762 00 001112 899999985 66 89999 99999999999999
Q ss_pred EEEeCccCC---hh-------hhcc---cCC----eEEEecccccCcce-eEEeec
Q psy5413 241 VHMDGARLP---LA-------EVCA---SVD----TVMFCLSKGLGAPV-GSILAG 278 (285)
Q Consensus 241 li~Dea~~~---~~-------~~~~---~~d----v~~~s~sK~l~~p~-gg~~~~ 278 (285)
||+||+|.. +. .+.. ++| +++.|+||+++++. ||++..
T Consensus 313 livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v 368 (730)
T 1c4k_A 313 IEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHK 368 (730)
T ss_dssp EEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEE
T ss_pred EEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEe
Confidence 999999862 11 1111 567 78999999999854 566633
No 223
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.69 E-value=2.1e-16 Score=153.11 Aligned_cols=168 Identities=16% Similarity=0.113 Sum_probs=125.8
Q ss_pred CChhHHHHHHHHHhHcCCCcEEEcCCh-HHHHHHHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeee
Q psy5413 99 EDPTCKELQEKAAKLAGKEAAIFVPSG-TMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 99 ~~~~~~~l~~~la~~~g~~~~~~~~~G-s~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~ 177 (285)
+.....++++.+++++|.+..+++.+| ++|+.+++.+++ ++||.|+++.+.|.+....... .|.+++.+
T Consensus 203 ~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~-~~GD~Vlv~~~~h~s~~~~~~~---------~G~~~v~v 272 (755)
T 2vyc_A 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM-TDNDVVVVDRNCHKSIEQGLML---------TGAKPVYM 272 (755)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHHHHHH---------HCCEEEEE
T ss_pred CccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhc-CCCCEEEECCCchHHHHHHHHH---------cCCEEEEE
Confidence 455688999999999999887655555 688999999987 6999999999999776553223 37787777
Q ss_pred ecCCC-----CCC-----CHHHHHHHhccccc---ccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 178 TNQKD-----GTF-----DLDEMEAKFSTADN---IHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 178 ~~~~~-----~~~-----d~~~l~~~i~~~~~---~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
+...+ +.+ |+++|+++|+++.+ .++.++++|++++| |++ |.++| +++|+++|++||++||+|
T Consensus 273 ~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~-G~v~d---l~~I~~ia~~~~~~livD 347 (755)
T 2vyc_A 273 VPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYD-GVCYN---AKEAQDLLEKTSDRLHFD 347 (755)
T ss_dssp CCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTT-SEEEC---HHHHHHHHTTTCSEEEEE
T ss_pred eCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCC-ceecC---HHHHHHHHHHcCCEEEEE
Confidence 65432 235 99999999975211 12334568999998 467 89999 999999999999999999
Q ss_pred CccCCh---hh----hc--cc--CCe------EEEecccccCcce-eEEeecCcc
Q psy5413 245 GARLPL---AE----VC--AS--VDT------VMFCLSKGLGAPV-GSILAGPEE 281 (285)
Q Consensus 245 ea~~~~---~~----~~--~~--~dv------~~~s~sK~l~~p~-gg~~~~~~~ 281 (285)
|+|+.. .. .. .+ +|+ ++.|+||+++++. ||++..+++
T Consensus 348 eA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 348 EAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_dssp CTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECC
T ss_pred CcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCc
Confidence 998721 11 01 34 676 7999999999964 677765544
No 224
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.69 E-value=4.1e-17 Score=144.93 Aligned_cols=181 Identities=9% Similarity=-0.001 Sum_probs=122.6
Q ss_pred cCCCcHHHHHHHHhcccCC----------CCcc--CChhHHHHHHHHHhHcCCC---cE-EEcCChHHHHHHHHHHcccc
Q psy5413 76 ISKPTMEMKNYMFNCEVGD----------DVYL--EDPTCKELQEKAAKLAGKE---AA-IFVPSGTMGNLIAIMTHCDR 139 (285)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~----------~~y~--~~~~~~~l~~~la~~~g~~---~~-~~~~~Gs~a~~~al~~~~~~ 139 (285)
+...++++++++.+..... ..++ ..+...++++.+++++|.+ .+ ++++||++|+..++.+++ +
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~-~ 90 (362)
T 2c0r_A 12 PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFL-K 90 (362)
T ss_dssp SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHC-C
T ss_pred CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcC-C
Confidence 4668899999998766421 1111 1224678999999999976 34 566899999999999987 5
Q ss_pred CCCeEEecCCcceeeecccccccccccccccceeeeeeecCC---CC-CCCHHHHHHHhcccccccCCceEEEEEecccC
Q psy5413 140 RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQK---DG-TFDLDEMEAKFSTADNIHCASTSLVCVENTHN 215 (285)
Q Consensus 140 ~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~-~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n 215 (285)
+||+|++....|.... ..... ...| +++.++.+. .+ .+|+++++ +++ ++++|++++++|
T Consensus 91 ~gd~vl~~~~~~~~~~-~~~~~------~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-------~t~~v~~~~~~n 153 (362)
T 2c0r_A 91 EGQTANYVMTGSWASK-ALKEA------KLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-------NAAYLHLTSNET 153 (362)
T ss_dssp TTCEEEEEECSHHHHH-HHHHH------HHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-------TEEEEEEESEET
T ss_pred CCCeEEEEecCcHhHH-HHHHH------HHhC-CeEEEecccccccccCCCHHHcc--cCC-------CcCEEEEeCCcC
Confidence 8999877654432211 00111 2346 777776541 22 24655543 544 799999999999
Q ss_pred CCCeee-CCHHHHHHHHHHHHHcCCeEEEeCccC-Chhhh-cccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 216 YCGGTV-LPMQWLRELKARCQEHNIPVHMDGARL-PLAEV-CASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 216 ~~gG~~-~~~~~l~~i~~la~~~gi~li~Dea~~-~~~~~-~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
+| |.+ .+ +++| ||+++|+|++|. +.... ....|+++.|+||+++.+-.|+++.++++++
T Consensus 154 ~t-G~~~~~---l~~i------~~~~vivD~a~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~~~~ 215 (362)
T 2c0r_A 154 IE-GAQFKA---FPDT------GSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVA 215 (362)
T ss_dssp TT-TEECSS---CCCC------TTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSS
T ss_pred cc-ceeccc---cccc------CCCEEEEEChhhccCCccchhHCcEEEEeccccccCcCcEEEEEcHHHHh
Confidence 99 665 55 6665 899999999988 21111 2234899999999997433388888887764
No 225
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.67 E-value=3.3e-16 Score=142.08 Aligned_cols=199 Identities=14% Similarity=0.094 Sum_probs=136.3
Q ss_pred eeeeccCCcCC------CcHHHHHHHHhcccC--CCCccCChhHHHHHHHHHhHc-CCC----c--EEEcCChHHHHHHH
Q psy5413 68 TVDIRSDTISK------PTMEMKNYMFNCEVG--DDVYLEDPTCKELQEKAAKLA-GKE----A--AIFVPSGTMGNLIA 132 (285)
Q Consensus 68 ~~~~~~~~~~~------~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~-g~~----~--~~~~~~Gs~a~~~a 132 (285)
-+||..+.+.. .-|.|++|.+..... ...|.+..+..+|++.+++++ |.. . .+.+.+||.|+..+
T Consensus 46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a 125 (420)
T 4h51_A 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLG 125 (420)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHH
T ss_pred CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHH
Confidence 46776653221 346788886655443 235888888999999999984 422 1 25678899998777
Q ss_pred HHHcc---ccCCCeEEecCCcceeeecccccccccccccccceeee-eee--cCCCCCCCHHHHHHHhcccccccCCceE
Q psy5413 133 IMTHC---DRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMR-GVT--NQKDGTFDLDEMEAKFSTADNIHCASTS 206 (285)
Q Consensus 133 l~~~~---~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 206 (285)
+..+. ..+||+|+++++++........ ..|.+.+ ..+ ......+|.+.+.+.+.. ..++++
T Consensus 126 ~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~---------~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~----~~~~~~ 192 (420)
T 4h51_A 126 AKLLTRVFDAETTPIYLSDPTWPNHYGVVK---------AAGWKNICTYAYYDPKTVSLNFEGMKKDILA----APDGSV 192 (420)
T ss_dssp HHHHTTTSCTTTSCEEEEESCCTHHHHHHH---------HTTCCCEEEEECEEGGGTEECHHHHHHHHHH----SCSSCE
T ss_pred HHHHHHhcCCCCCEEEEecCCchhHHHHHH---------HcCCeEEEeeccccccccCCCHHHHHHHHhc----cCCCcE
Confidence 66543 2589999999988754433222 2354433 222 223455788988888865 233778
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhh------------hcc-cCC-eEEEecccccCc--
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAE------------VCA-SVD-TVMFCLSKGLGA-- 270 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~------------~~~-~~d-v~~~s~sK~l~~-- 270 (285)
++++.+|+||| |..++.+++++|+++|+++++++|+||+|.++.. ..+ +.. +++.|+||.++.
T Consensus 193 vll~~~p~NPt-G~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 271 (420)
T 4h51_A 193 FILHQCAHNPT-GVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYS 271 (420)
T ss_dssp EEEESSSCTTT-CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG
T ss_pred EEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEecccccccccc
Confidence 88889999999 9999999999999999999999999999873211 111 223 348999998766
Q ss_pred ceeEEeecCc
Q psy5413 271 PVGSILAGPE 280 (285)
Q Consensus 271 p~gg~~~~~~ 280 (285)
.+.|+++...
T Consensus 272 ~RvG~~~~~~ 281 (420)
T 4h51_A 272 ERAGTLSLLL 281 (420)
T ss_dssp GCEEEEEEEC
T ss_pred CceEEEEecc
Confidence 6667766543
No 226
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.66 E-value=3.1e-16 Score=142.13 Aligned_cols=163 Identities=20% Similarity=0.146 Sum_probs=113.6
Q ss_pred HHHHHHHHhHcCCCcE---EEcCChHHHHHHHHHHcccc---CCCeEEecCCcceeeecccccccccccccccceeeeee
Q psy5413 104 KELQEKAAKLAGKEAA---IFVPSGTMGNLIAIMTHCDR---RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 104 ~~l~~~la~~~g~~~~---~~~~~Gs~a~~~al~~~~~~---~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~ 177 (285)
..+...+.+++|.+.. ++++++|.++++++.++++. +++.|+++...|.++..+..+. |...+.+
T Consensus 101 ~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~---------Gl~p~~v 171 (450)
T 3bc8_A 101 NSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTA---------GFEPVVI 171 (450)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHT---------TCEEEEE
T ss_pred HHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHc---------CCeeEEE
Confidence 3455555666687653 88888875555555555432 2778888888999988766555 5555544
Q ss_pred ec---CCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC-h---
Q psy5413 178 TN---QKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP-L--- 250 (285)
Q Consensus 178 ~~---~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~-~--- 250 (285)
+. ++.+.+|+++|+++|+++. .+.+.+|++++.++.+ |.+.| |++|+++|++||+|+|+|+||+. .
T Consensus 172 ~~~~~~~~~~id~~~le~aI~~~~---~~~~~~Vv~t~t~~g~-g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~ 244 (450)
T 3bc8_A 172 ENVLEGDELRTDLKAVEAKIQELG---PEHILCLHSTTACFAP-RVPDR---LEELAVICANYDIPHVVNNAYGLQSSKC 244 (450)
T ss_dssp CCEEETTEEECCHHHHHHHHHHHC---GGGEEEEEEESSCCTT-BCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHH
T ss_pred EeeecCccCCcCHHHHHHHHHhcC---CCCEEEEEEECCcCCC-ceecC---HHHHHHHHHHCCCeEEEECCCchhhhhh
Confidence 32 4456799999999998742 1255666665544433 68889 99999999999999999999882 1
Q ss_pred ---h-hhc--ccCCeEEEecccccCcceeEEee--cCccc
Q psy5413 251 ---A-EVC--ASVDTVMFCLSKGLGAPVGSILA--GPEEF 282 (285)
Q Consensus 251 ---~-~~~--~~~dv~~~s~sK~l~~p~gg~~~--~~~~~ 282 (285)
. ... +++|.++.|.|||+..|.+|.++ .++++
T Consensus 245 ~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~ 284 (450)
T 3bc8_A 245 MHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPF 284 (450)
T ss_dssp HHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHH
T ss_pred HhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCHHH
Confidence 1 122 58999999999999997555443 34444
No 227
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.66 E-value=4e-16 Score=149.27 Aligned_cols=167 Identities=17% Similarity=0.150 Sum_probs=124.8
Q ss_pred CccCChhHHHHHHHHHhHcCCCcEEEcCCh-HHHHHHHHHHccccCCCeEEecCCcceeeecccccccccccccccceee
Q psy5413 96 VYLEDPTCKELQEKAAKLAGKEAAIFVPSG-TMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLM 174 (285)
Q Consensus 96 ~y~~~~~~~~l~~~la~~~g~~~~~~~~~G-s~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~ 174 (285)
...+.....++++.+|+++|.+.++++.+| +.||.+++.+++ ++||.|+++...|.++.....++ |.++
T Consensus 190 L~~~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~-~pGD~VLv~r~~H~S~~~~l~ls---------Ga~p 259 (715)
T 3n75_A 190 LLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSA-PAGSTILIDRNCHKSLTHLMMMS---------DVTP 259 (715)
T ss_dssp TTTTBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHHHHHHS---------CCEE
T ss_pred CCCCcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhC-CCCCEEEECCCccHHHHHHHHHc---------CCEE
Confidence 444556699999999999999999877777 589999999887 69999999999998876643333 7777
Q ss_pred eeeecCCC-C----CC-----CHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 175 RGVTNQKD-G----TF-----DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 175 ~~~~~~~~-~----~~-----d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
+.++...+ + .+ |+++|+++|+++.+. ..+++|++++| |++ |.++| +++|+++|++++ +|+|
T Consensus 260 v~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~--k~p~~vivt~p-n~~-G~v~d---l~~I~ela~~~~--livD 330 (715)
T 3n75_A 260 IYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA--TWPVHAVITNS-TYD-GLLYN---TDFIKKTLDVKS--IHFD 330 (715)
T ss_dssp EEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTC--CSCSEEEEESS-CTT-SEEEC---HHHHHHHCCCSE--EEEE
T ss_pred EEEeccccccccccCcccccCCHHHHHHHHhhCcCc--cCceEEEEECC-CCC-CccCC---HHHHHHHhCcCc--EEEc
Confidence 77764322 2 23 899999999863211 12348888888 777 89999 899999998764 7999
Q ss_pred CccCChh----------hhcc--cCCeE---EEecccccCcc-eeEEeecCcc
Q psy5413 245 GARLPLA----------EVCA--SVDTV---MFCLSKGLGAP-VGSILAGPEE 281 (285)
Q Consensus 245 ea~~~~~----------~~~~--~~dv~---~~s~sK~l~~p-~gg~~~~~~~ 281 (285)
|||+... .+.. .+|++ +.|+||+|+++ .||++..+++
T Consensus 331 EAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~ 383 (715)
T 3n75_A 331 SAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD 383 (715)
T ss_dssp CTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESC
T ss_pred cccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCch
Confidence 9987211 1111 25765 89999999995 7788876554
No 228
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.64 E-value=4.7e-16 Score=141.96 Aligned_cols=161 Identities=17% Similarity=0.110 Sum_probs=117.4
Q ss_pred hhHHHHHHHHHhHcCCCcE--EEcCChHHHHHHHHHHccccCCCeEEecCCcceeeeccc-ccccccccccccceeeeee
Q psy5413 101 PTCKELQEKAAKLAGKEAA--IFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQG-GASQTSVYSQIGRVLMRGV 177 (285)
Q Consensus 101 ~~~~~l~~~la~~~g~~~~--~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~~~~~~~g~~~~~~ 177 (285)
+...++++.+++++|.+.. +++++|+.++++++.++...+|++|+++.+.|.++.... ..+ ...|.+++.+
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a------~~~G~~v~~v 181 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYL------EAVGAKLLTL 181 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHH------HHTTCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHH------HHCCCEEEEE
Confidence 3477999999999998755 688888855555554433358999999999887654321 111 2358888888
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc-cC-Ch-h-hh
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA-RL-PL-A-EV 253 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea-~~-~~-~-~~ 253 (285)
+. +++.+|+++ |++ +|++|++++| |++ |.+.| +++|+++|++||+++|+|.. ++ +. . ..
T Consensus 182 ~~-~~~~~d~~~----i~~-------~t~~v~i~~p-n~t-G~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~~~~~ 244 (438)
T 1wyu_A 182 PL-EGGRTPLPE----VGE-------EVGAVVVQNP-NFL-GALED---LGPFAEAAHGAGALFVAVADPLSLGVLKPPG 244 (438)
T ss_dssp CC-BTTBCCCCC----CCT-------TEEEEEEESS-CTT-SBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTBCCHH
T ss_pred cC-cCCccCHHH----hCC-------CeEEEEEECC-CCC-eEEec---HHHHHHHHHHcCCEEEEEechhhccCcCCCc
Confidence 86 456677665 555 7999999999 898 89998 99999999999999996633 22 11 1 12
Q ss_pred cccCCeEEEeccc-----ccCcceeEEeecCccccc
Q psy5413 254 CASVDTVMFCLSK-----GLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 254 ~~~~dv~~~s~sK-----~l~~p~gg~~~~~~~~i~ 284 (285)
..++|+++++.+| |++||.+|+++.++++++
T Consensus 245 ~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~ 280 (438)
T 1wyu_A 245 AYGADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVR 280 (438)
T ss_dssp HHTCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGG
T ss_pred cCCCCEEEECCcccCCCccCCCCCeeEEEEcHHHHH
Confidence 2468999888555 677787889988887764
No 229
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.63 E-value=2.8e-16 Score=141.49 Aligned_cols=188 Identities=12% Similarity=-0.006 Sum_probs=121.7
Q ss_pred CeeeeeccCCcCCCcHHHHHHHHhc---ccCC-CCcc-CChhHHHHHHHHHhHcCCC---cEEE-cCChHHHHHHHHHHc
Q psy5413 66 IRTVDIRSDTISKPTMEMKNYMFNC---EVGD-DVYL-EDPTCKELQEKAAKLAGKE---AAIF-VPSGTMGNLIAIMTH 136 (285)
Q Consensus 66 ~~~~~~~~~~~~~~~~~v~~a~~~~---~~~~-~~y~-~~~~~~~l~~~la~~~g~~---~~~~-~~~Gs~a~~~al~~~ 136 (285)
+.+++|.. .+...++++++++.+. ..+. ..|. ..+...++++.+++++|.+ .+++ ++||++|+..+++++
T Consensus 39 ~~~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l 117 (398)
T 2fyf_A 39 PRDGRFGS-GPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGL 117 (398)
T ss_dssp CSSCBCCS-SSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHT
T ss_pred cCCccccC-CCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHh
Confidence 34555554 3456788999999873 2221 1121 1234678999999999975 3577 999999999999998
Q ss_pred cccCCCeEEecCCcceeeecccccccccccccc--cceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEeccc
Q psy5413 137 CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQI--GRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTH 214 (285)
Q Consensus 137 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~ 214 (285)
+ ++| .+++....|..... ..+ .. .|.+++.++.+++...+. .+++ ++++|++++++
T Consensus 118 ~-~~g-v~~v~~~~~~~~~~--~~~------~~~~~g~~~~~v~~~~g~~~~~-----~i~~-------~~~~v~~~~~~ 175 (398)
T 2fyf_A 118 I-DKR-SLHLTYGEFSAKFA--SAV------SKNPFVGEPIIITSDPGSAPEP-----QTDP-------SVDVIAWAHNE 175 (398)
T ss_dssp C-SSC-EEEEECSHHHHHHH--HHH------HHCTTSCCCEEEECCTTCCCCC-----CCCT-------TCSEEEEESEE
T ss_pred c-CCC-eEEEeCCHHHHHHH--HHH------HHhCCCCceEEEecCCCCCCCc-----cccC-------CCCEEEEeCcC
Confidence 7 465 22334444422110 011 11 256666676642222221 1333 78999999999
Q ss_pred CCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh-h-hcccCCeEEEecccccCcc-eeEEeecCcccc
Q psy5413 215 NYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA-E-VCASVDTVMFCLSKGLGAP-VGSILAGPEEFI 283 (285)
Q Consensus 215 n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~-~-~~~~~dv~~~s~sK~l~~p-~gg~~~~~~~~i 283 (285)
|++ |.++| +++|.++ +|+++|+||+|.... . -...+|+++.|+||+++++ ..|+++.+++++
T Consensus 176 npt-G~~~~---~~~i~~~---~~~~vivD~a~~~~~~~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~~~~ 240 (398)
T 2fyf_A 176 TST-GVAVA---VRRPEGS---DDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAAL 240 (398)
T ss_dssp TTT-TEECC---CCCCTTC---C-CEEEEECTTTTTTSCCCGGGCSEEEECTTSTTCSCSSEEEEEECHHHH
T ss_pred CCc-ceecc---hHHhhhh---cCCeEEEEeccccCCcccCcccCcEEEEecCcccCCCCceEEEEECHHHH
Confidence 999 89999 5555554 899999999988211 1 1234899999999999885 456777777664
No 230
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.62 E-value=4.6e-15 Score=132.92 Aligned_cols=189 Identities=15% Similarity=0.125 Sum_probs=125.9
Q ss_pred eccCCcCCCcHHHHHHHHhcccC--------CCCccCChhHHHHHH----HHHhHcCCCcE-----EEcCChHHHHHHHH
Q psy5413 71 IRSDTISKPTMEMKNYMFNCEVG--------DDVYLEDPTCKELQE----KAAKLAGKEAA-----IFVPSGTMGNLIAI 133 (285)
Q Consensus 71 ~~~~~~~~~~~~v~~a~~~~~~~--------~~~y~~~~~~~~l~~----~la~~~g~~~~-----~~~~~Gs~a~~~al 133 (285)
..|+|+. ++.|++++-..+.+ ...|+..+..+++|+ +..++||++.+ +...||+.||.+++
T Consensus 60 IASEN~~--S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy 137 (490)
T 3ou5_A 60 IASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVY 137 (490)
T ss_dssp CTTCCCC--CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHH
T ss_pred ecCCCcC--CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHH
Confidence 3566664 99999998776653 224555555555554 45667898864 78889999999999
Q ss_pred HHccccCCCeEEecCCc---ceeeec---ccccccccccccccce--eeeeeecC-CCCCCCHHHHHHHhcccccccCCc
Q psy5413 134 MTHCDRRDSEIIVGDCS---HIMLWE---QGGASQTSVYSQIGRV--LMRGVTNQ-KDGTFDLDEMEAKFSTADNIHCAS 204 (285)
Q Consensus 134 ~~~~~~~g~~vi~~~~~---h~~~~~---~~~~~~~~~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~ 204 (285)
.+++ +|||.|+..+.. |.+... ...+. ..|. +.+..+.+ +++.+|.+++++...++ +
T Consensus 138 ~All-~PGD~ilg~~l~~GGHltHg~~~~~~~v~-------~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~------k 203 (490)
T 3ou5_A 138 TALL-QPHDRIMGLDLPDGGHLTHGYMSDVKRIS-------ATSIFFESMPYKLNPKTGLIDYNQLALTARLF------R 203 (490)
T ss_dssp HHHC-C-CCCEECBC-----------------------------------CBCEETTTTEECHHHHHHHHHHH------C
T ss_pred HHHc-CCCCEEEecccCCCCcccccccCCCcccc-------cccccccccccccCCCCCcccHHHHHHHHhhc------C
Confidence 9988 699998875433 322110 01111 0122 22222322 45779999999998875 7
Q ss_pred eEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chh------hhcccCCeEEEecccccCcceeEEee
Q psy5413 205 TSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLA------EVCASVDTVMFCLSKGLGAPVGSILA 277 (285)
Q Consensus 205 ~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~------~~~~~~dv~~~s~sK~l~~p~gg~~~ 277 (285)
+++|++-....+ ..+| +++++++|++-|.+|++|.+|. ++. .-..++|+++.|.||+|.||+||+|+
T Consensus 204 PklIi~G~SaY~---r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGPrGG~Il 277 (490)
T 3ou5_A 204 PRLIIAGTSAYA---RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIF 277 (490)
T ss_dssp CSEEEECCSSCC---SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSCSCEEEE
T ss_pred CCeEEECCccCc---cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCCCceEEE
Confidence 899988555443 6777 9999999999999999999988 221 22367999999999999999999999
Q ss_pred cCcc
Q psy5413 278 GPEE 281 (285)
Q Consensus 278 ~~~~ 281 (285)
.+++
T Consensus 278 ~~~~ 281 (490)
T 3ou5_A 278 YRKG 281 (490)
T ss_dssp EECS
T ss_pred eccc
Confidence 8764
No 231
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.62 E-value=8.1e-16 Score=138.30 Aligned_cols=155 Identities=19% Similarity=0.151 Sum_probs=113.7
Q ss_pred cCCCc---EEEcCChHHHHHHHHHHcccc---CCCeEEecCCcceeeecccccccccccccccceeeeeeec---CCCCC
Q psy5413 114 AGKEA---AIFVPSGTMGNLIAIMTHCDR---RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN---QKDGT 184 (285)
Q Consensus 114 ~g~~~---~~~~~~Gs~a~~~al~~~~~~---~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~ 184 (285)
.|.+. .++++++|.++.+++.+++.+ .++.||++...|.+...+..++ |...+.++. .+...
T Consensus 129 ~G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~---------Gl~Pv~V~p~~d~~~~~ 199 (501)
T 3hl2_A 129 AGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITA---------GFEPVVIENVLEGDELR 199 (501)
T ss_dssp TTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHT---------TCEEEEECEEEETTEEE
T ss_pred cCCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHc---------CCeEEEEeeeecccccC
Confidence 37654 477777787888888887743 2488999999999887765555 777776654 23356
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh--------hh-cc
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA--------EV-CA 255 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~--------~~-~~ 255 (285)
+|+++++++|+++. .+.+.+|+++++++.+ +.+.+ |++|+++|++||+++++||||+... .. .-
T Consensus 200 id~e~le~aI~e~g---a~~i~~V~~Ttt~y~p-~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~ 272 (501)
T 3hl2_A 200 TDLKAVEAKVQELG---PDCILCIHSTTSCFAP-RVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARV 272 (501)
T ss_dssp ECHHHHHHHHHHHC---GGGEEEEEEECSCCTT-BCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcC---CCcEEEEEecCCCCCC-ccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhc
Confidence 89999999998741 1366777776666633 67788 9999999999999999999988211 11 12
Q ss_pred c-CCeEEEecccccCcceeEEee--cCccccc
Q psy5413 256 S-VDTVMFCLSKGLGAPVGSILA--GPEEFIQ 284 (285)
Q Consensus 256 ~-~dv~~~s~sK~l~~p~gg~~~--~~~~~i~ 284 (285)
+ +|+++.|.||++..|+||.++ .++++++
T Consensus 273 GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~ 304 (501)
T 3hl2_A 273 GRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQ 304 (501)
T ss_dssp SCCCEEEEEHHHHHCCCSSCEEEEESCHHHHH
T ss_pred CCCcEEEecccccceeecCceEEEeCCHHHHH
Confidence 4 999999999998888877554 3555543
No 232
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.62 E-value=3.3e-16 Score=140.95 Aligned_cols=188 Identities=14% Similarity=0.007 Sum_probs=125.4
Q ss_pred CCeeeeeccCCcCCCcH-HHHHHHHhcc--c---CCCCccCChhH-----HHHHHHHHhHcC-------C-CcEEEcCCh
Q psy5413 65 NIRTVDIRSDTISKPTM-EMKNYMFNCE--V---GDDVYLEDPTC-----KELQEKAAKLAG-------K-EAAIFVPSG 125 (285)
Q Consensus 65 ~~~~~~~~~~~~~~~~~-~v~~a~~~~~--~---~~~~y~~~~~~-----~~l~~~la~~~g-------~-~~~~~~~~G 125 (285)
+..+++|..+.+..+.| .+.+++.+.. . +...|...... .+|++.++++++ . +.+++++|+
T Consensus 21 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G~ 100 (391)
T 3bwn_A 21 SDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTGS 100 (391)
T ss_dssp TTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEHH
T ss_pred CCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCCh
Confidence 45678998888876555 4445443222 1 22356655555 899999999986 2 356888888
Q ss_pred HHHHHHHHHHccccCCC----eEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhccccccc
Q psy5413 126 TMGNLIAIMTHCDRRDS----EIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIH 201 (285)
Q Consensus 126 s~a~~~al~~~~~~~g~----~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~ 201 (285)
++++..++.+++ ++|| +|++++++|....... ...|.+++.++.+.++ ++ .+
T Consensus 101 ~~al~~~~~~l~-~~Gd~~~~~Vlv~~P~y~~~~~~~---------~~~g~~~~~~~~d~~~------l~---~~----- 156 (391)
T 3bwn_A 101 TQLCQAAVHALS-SLARSQPVSVVAAAPFYSTYVEET---------TYVRSGMYKWEGDAWG------FD---KK----- 156 (391)
T ss_dssp HHHHHHHHHHHH-HTSSSSSEEEEECSSCCTHHHHHH---------HTTCBTTEEEEEESTT------CC---CC-----
T ss_pred HHHHHHHHHHhc-CCCCCCcceEEEcCCCchhHHHHH---------HHcCCeEEEecCCHHH------cC---CC-----
Confidence 999999999987 5899 9999998886544322 2347777777663221 11 13
Q ss_pred CCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC--hhhh--cccCCeEEEecccccCc--ceeEE
Q psy5413 202 CASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP--LAEV--CASVDTVMFCLSKGLGA--PVGSI 275 (285)
Q Consensus 202 ~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~--~~~~--~~~~dv~~~s~sK~l~~--p~gg~ 275 (285)
++++|++++|+||| |.+++ +|++.++.+++++|+||+|.. ...+ ....++++.|+||.++. .+.|+
T Consensus 157 --~~k~v~l~~p~NPt-G~~~~-----~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~ 228 (391)
T 3bwn_A 157 --GPYIELVTSPNNPD-GTIRE-----TVVNRPDDDEAKVIHDFAYYWPHYTPITRRQDHDIMLFTFSKITGHAGSRIGW 228 (391)
T ss_dssp --SCEEEEEESSCTTT-CCCCC-----CCC-----CCCEEEEECTTCSTTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEE
T ss_pred --CCEEEEECCCCCCC-chhHH-----HHHHHhhcCCCEEEEeCCCCCCCCCccccCCCCeEEEEechhhcCCCccceEE
Confidence 68999999999999 78876 344422333499999999872 1111 12345779999999874 55677
Q ss_pred eec-Cccccc
Q psy5413 276 LAG-PEEFIQ 284 (285)
Q Consensus 276 ~~~-~~~~i~ 284 (285)
++. ++++++
T Consensus 229 ~~~~~~~l~~ 238 (391)
T 3bwn_A 229 ALVKDKEVAK 238 (391)
T ss_dssp EEECCHHHHH
T ss_pred EEecCHHHHH
Confidence 764 776653
No 233
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.59 E-value=1.3e-15 Score=136.20 Aligned_cols=188 Identities=8% Similarity=-0.091 Sum_probs=129.4
Q ss_pred CCcCCCcHHHHHHHHhcccCC-----CC---cc----CChhHHHHHHHHHhHcCCCc---EEE-cCChHHHHHHHHHHcc
Q psy5413 74 DTISKPTMEMKNYMFNCEVGD-----DV---YL----EDPTCKELQEKAAKLAGKEA---AIF-VPSGTMGNLIAIMTHC 137 (285)
Q Consensus 74 ~~~~~~~~~v~~a~~~~~~~~-----~~---y~----~~~~~~~l~~~la~~~g~~~---~~~-~~~Gs~a~~~al~~~~ 137 (285)
......+++|++++.+...+. .. .. ....+.+.|+.++++++.+. ++| +.|||++++.++..+.
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~ 98 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 98 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHG
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhcc
Confidence 333446889999999876521 11 11 12347889999999998753 577 5789999999999887
Q ss_pred cc-CCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCC
Q psy5413 138 DR-RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNY 216 (285)
Q Consensus 138 ~~-~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~ 216 (285)
.. +||++++....|... .+...+ +..|..++.++.++++..++++++.++++ ++++|.+.+..+.
T Consensus 99 ~~~~Gd~v~~~~~g~~~~-~~~~~a------~~~G~~~~~~~~~~~~~~~~~~~~~~i~~-------~t~lV~~~h~et~ 164 (377)
T 3e77_A 99 GLKAGRCADYVVTGAWSA-KAAEEA------KKFGTINIVHPKLGSYTKIPDPSTWNLNP-------DASYVYYCANETV 164 (377)
T ss_dssp GGSTTCEEEECCCSHHHH-HHHHHH------TTTSEEEECSCCCSSSCSCCCGGGCCCCT-------TCSCEEEESEETT
T ss_pred CCCCCCeEEEEECCHHHH-HHHHHH------HHhCCceEEeccCCCcCCCCChHHhccCC-------CccEEEEeCccCc
Confidence 42 388876654444321 222233 45577777777655555666666666655 7899999988777
Q ss_pred CCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chhhh-cccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 217 CGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLAEV-CASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 217 ~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~~~-~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
+ |.+.| + +|+++|+++++|.+++ +...+ ....|+++++.+||+|.+-.|++..++++++
T Consensus 165 t-G~~~p---i-----i~~~~~~~~~vD~~q~~g~~~id~~~~~~~~~s~~K~~gp~G~g~l~~~~~~l~ 225 (377)
T 3e77_A 165 H-GVEFD---F-----IPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 225 (377)
T ss_dssp T-TEECS---S-----CCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEEGGGTTSCTTCEEEEEETTSCS
T ss_pred h-heEch---h-----hhccCCCEEEEEcccccCCCCCchhhcCEEEEecccccCCCccEEEEEcHHHHh
Confidence 7 99999 5 4778999999999988 22222 2345678999999996444467777776654
No 234
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.55 E-value=2.2e-15 Score=135.16 Aligned_cols=190 Identities=9% Similarity=-0.057 Sum_probs=126.7
Q ss_pred eeccCCcCCCcHHHHHHHHhcccC------------CCCccCChhHHHHHHHHHhHcCCCc---EEE-cCChHHHHHHHH
Q psy5413 70 DIRSDTISKPTMEMKNYMFNCEVG------------DDVYLEDPTCKELQEKAAKLAGKEA---AIF-VPSGTMGNLIAI 133 (285)
Q Consensus 70 ~~~~~~~~~~~~~v~~a~~~~~~~------------~~~y~~~~~~~~l~~~la~~~g~~~---~~~-~~~Gs~a~~~al 133 (285)
.+.+..++..+++|++++.+.... +..........+.|+.+++++|.+. ++| +.|||++++.++
T Consensus 29 yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai 108 (386)
T 3qm2_A 29 FNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVP 108 (386)
T ss_dssp EECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHH
Confidence 344455566899999999876532 1011123457899999999999752 577 589999999999
Q ss_pred HHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeecC--CCCC-CCHHHHHHHhcccccccCCceEEEEE
Q psy5413 134 MTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQ--KDGT-FDLDEMEAKFSTADNIHCASTSLVCV 210 (285)
Q Consensus 134 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~-~d~~~l~~~i~~~~~~~~~~~~~v~i 210 (285)
..++ ++|+++++....|... .+...+ +..| .+..++.+ +++. .++++++.++++ +|++|.+
T Consensus 109 ~~l~-~~gd~v~~~~~~~~~~-~~~~~a------~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~-------~t~lV~~ 172 (386)
T 3qm2_A 109 LNLL-GDKTTADYVDAGYWAA-SAIKEA------KKYC-APQIIDAKITVDGKRAVKPMREWQLSD-------NAAYLHY 172 (386)
T ss_dssp HHHC-TTCCEEEEEESSHHHH-HHHHHH------TTTS-EEEEEECEEEETTEEEECCGGGCCCCT-------TCSCEEE
T ss_pred Hhcc-CCCCeEEEEeCCHHHH-HHHHHH------HHhC-CeEEEecCcccCCCCCCchHHHhhcCC-------CCcEEEE
Confidence 9887 5888865433322211 111222 3456 67777764 3553 677778777776 7899999
Q ss_pred ecccCCCCeee-CCHHHHHHHHHHHHHcCCeEEEeCccC-Chhhh-cccCCeEEEecccccCcceeEEeecCccccc
Q psy5413 211 ENTHNYCGGTV-LPMQWLRELKARCQEHNIPVHMDGARL-PLAEV-CASVDTVMFCLSKGLGAPVGSILAGPEEFIQ 284 (285)
Q Consensus 211 ~~~~n~~gG~~-~~~~~l~~i~~la~~~gi~li~Dea~~-~~~~~-~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i~ 284 (285)
.+..+.+ |.+ .| +++|. +|+++++|.+|+ +...+ ....|++++|.+||+|.+-.|++..++++++
T Consensus 173 ~h~et~t-G~~i~p---i~~i~-----~g~~~~vDa~qs~g~~pidv~~~~~~~~s~hK~lGP~G~g~l~v~~~~~~ 240 (386)
T 3qm2_A 173 CPNETID-GIAIDE---TPDFG-----PEVVVTADFSSTILSAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLG 240 (386)
T ss_dssp CSEETTT-TEECCC---CCCCC-----TTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCTTEEEEEEEGGGCS
T ss_pred ECCcCCc-CEecCc---hhhhc-----CCCEEEEEcccccCCCCCCccccCEEEEecccccCCCccEEEEECHHHHh
Confidence 9988888 775 78 66664 899999999988 22222 2344678899999996433466777776654
No 235
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.54 E-value=1.8e-15 Score=137.77 Aligned_cols=185 Identities=12% Similarity=-0.050 Sum_probs=130.0
Q ss_pred CeeeeeccCCcCCCc-HHHHHHHHhccc--CCCC--ccCCh-h---HHHHHHHHHhHcC--------CCcEEEcCChHHH
Q psy5413 66 IRTVDIRSDTISKPT-MEMKNYMFNCEV--GDDV--YLEDP-T---CKELQEKAAKLAG--------KEAAIFVPSGTMG 128 (285)
Q Consensus 66 ~~~~~~~~~~~~~~~-~~v~~a~~~~~~--~~~~--y~~~~-~---~~~l~~~la~~~g--------~~~~~~~~~Gs~a 128 (285)
..+++|..+.+..+. +.+.+++.+... +... |.... . ..+|++.++++++ .+.+++++|++++
T Consensus 56 ~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~a 135 (427)
T 2hox_A 56 GCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL 135 (427)
T ss_dssp TCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred CceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHH
Confidence 356888877776644 467777776652 2222 65444 4 7899999999975 2457899999999
Q ss_pred HHHHHHHc--------cccCCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccc
Q psy5413 129 NLIAIMTH--------CDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNI 200 (285)
Q Consensus 129 ~~~al~~~--------~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~ 200 (285)
+..++.++ + ++||+|+++.++|....... ...|.+++.+. +|+++|++++++
T Consensus 136 l~~~~~~l~~~~~~~~~-~~Gd~Vlv~~P~y~~~~~~~---------~~~g~~~~~~~------~d~~~l~~~~~~---- 195 (427)
T 2hox_A 136 IHGLVISLSPNMTATPD-APESKVVAHAPFYPVFREQT---------KYFDKKGYVWA------GNAANYVNVSNP---- 195 (427)
T ss_dssp HHHHHHHHSCCTTTCTT-SCCEEEEECSSCCHHHHHHH---------HHSCBTTEEEE------EEGGGGTTCSCG----
T ss_pred HHHHHHHHhhccccccC-CCCCEEEEeCCCcccHHHHH---------HHcCCeeeeec------CCHHHHHHhhcC----
Confidence 99999987 5 68999999998875443311 22355555433 477888888866
Q ss_pred cCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCC----hhhhcccCCeEEEecccccCc--ceeE
Q psy5413 201 HCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLP----LAEVCASVDTVMFCLSKGLGA--PVGS 274 (285)
Q Consensus 201 ~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~----~~~~~~~~dv~~~s~sK~l~~--p~gg 274 (285)
++++|++++|+||| |.+++ +.+ + ++..+.|+++.. +..+....++++.|+||.++. .+.|
T Consensus 196 ---~~k~v~l~~p~NPt-G~~~~-~~l-------~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG 261 (427)
T 2hox_A 196 ---EQYIEMVTSPNNPE-GLLRH-AVI-------K--GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFG 261 (427)
T ss_dssp ---GGEEEEEESSCTTT-CCCCC-CSS-------T--TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCE
T ss_pred ---CceEEEEcCCCCCc-ccccH-HHH-------c--CCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEE
Confidence 78999999999999 88888 532 2 567899988652 112223457789999999874 5667
Q ss_pred Eeec-Cccccc
Q psy5413 275 ILAG-PEEFIQ 284 (285)
Q Consensus 275 ~~~~-~~~~i~ 284 (285)
+++. ++++++
T Consensus 262 ~~~~~~~~l~~ 272 (427)
T 2hox_A 262 WALIKDESVYN 272 (427)
T ss_dssp EEEECCHHHHH
T ss_pred EEEECCHHHHH
Confidence 8777 566653
No 236
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.40 E-value=1.2e-13 Score=122.88 Aligned_cols=182 Identities=14% Similarity=0.084 Sum_probs=120.6
Q ss_pred eeeccCCcCCCcHHHHHHHHhcccC-----CCCc-------cCChhHHHHHHHHHhHcCCC---cEEE-cCChHHHHHHH
Q psy5413 69 VDIRSDTISKPTMEMKNYMFNCEVG-----DDVY-------LEDPTCKELQEKAAKLAGKE---AAIF-VPSGTMGNLIA 132 (285)
Q Consensus 69 ~~~~~~~~~~~~~~v~~a~~~~~~~-----~~~y-------~~~~~~~~l~~~la~~~g~~---~~~~-~~~Gs~a~~~a 132 (285)
+.|..+ ++..+++|++++.+.... ...+ .......+.|+.++++++.+ .++| +.|||++++.+
T Consensus 7 ~~f~pg-pt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~ 85 (361)
T 3m5u_A 7 INFSAG-PSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMI 85 (361)
T ss_dssp EECCSS-SCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHH
T ss_pred EeecCC-CCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHH
Confidence 444433 366789999999887652 1111 01245788999999999974 3566 89999999999
Q ss_pred HHHccccCCCeE--EecC-CcceeeecccccccccccccccceeeeeeecCCCCC--CCHHHHHHHhcccccccCCceEE
Q psy5413 133 IMTHCDRRDSEI--IVGD-CSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGT--FDLDEMEAKFSTADNIHCASTSL 207 (285)
Q Consensus 133 l~~~~~~~g~~v--i~~~-~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~d~~~l~~~i~~~~~~~~~~~~~ 207 (285)
+..+. +|+++ ++.. ..|. +...+ +..|.++..++.++++. .+++. + |++ ++++
T Consensus 86 ~~~~~--~~~~~~~i~~~~~~~~----~~~~a------~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~-------~t~l 143 (361)
T 3m5u_A 86 PMNLA--LNGVCEYANTGVWTKK----AIKEA------QILGVNVKTVASSEESNFDHIPRV-E--FSD-------NADY 143 (361)
T ss_dssp HHHHC--CSSCEEEEECSHHHHH----HHHHH------HHTTCCEEEEEECTTTTSCSCCCC-C--CCT-------TSSE
T ss_pred HHhcC--CCCeEEEEeCCHHHHH----HHHHH------HHcCCceEEEecccCcCCCcCChh-h--cCC-------CCCE
Confidence 99876 56653 3222 2221 11122 34577888888766653 45555 3 766 7899
Q ss_pred EEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC-Chhhh-cccCCeEEEecccccCcceeEEeecCcccc
Q psy5413 208 VCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL-PLAEV-CASVDTVMFCLSKGLGAPVGSILAGPEEFI 283 (285)
Q Consensus 208 v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~-~~~~~-~~~~dv~~~s~sK~l~~p~gg~~~~~~~~i 283 (285)
|.+.+..+.+ |.+.|. +++ +|+++++|.+++ +...+ ....|+++++.+||+|.+-.|++..+++++
T Consensus 144 v~~~~~e~~t-G~~~~~--------i~~-~~~~~~vD~~q~~g~~~id~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~ 211 (361)
T 3m5u_A 144 AYICSNNTIY-GTQYQN--------YPK-TKTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDML 211 (361)
T ss_dssp EEEESEETTT-TEECSS--------CCC-CSSCEEEECGGGTTSSCCCCTTEEEEEEETTTTSSCTTCEEEEEEHHHH
T ss_pred EEEeCCCCCc-ceeCCc--------ccc-cCCEEEEEcccccCCCCCCcccCCEEEEechhccCCCccEEEEEcHHHH
Confidence 9999888888 788772 233 499999999988 22221 235789999999999643346666666554
No 237
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=74.69 E-value=5.5 Score=33.80 Aligned_cols=61 Identities=11% Similarity=0.066 Sum_probs=48.2
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. +++||+
T Consensus 25 Pf~~dg~iD~~~l~~lv~~li~~---Gv~Gl~v~GtTGE--~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTATAEVDYGKLEENLHKLGTF---PFRGFVVQGSNGE--FPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCTTSCBCHHHHHHHHHHHTTS---CCSEEEESSGGGT--GGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccc--hhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 34467889999999888654222 5789999998888 6888999999999999885 577777
No 238
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=72.27 E-value=5.4 Score=33.80 Aligned_cols=62 Identities=15% Similarity=-0.009 Sum_probs=48.2
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. +++||+=
T Consensus 26 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gi~v~GttGE--~~~Lt~~Er~~v~~~~~~~~~grvpviaG 90 (304)
T 3l21_A 26 PFSGDGSLDTATAARLANHLVDQ---GCDGLVVSGTTGE--SPTTTDGEKIELLRAVLEAVGDRARVIAG 90 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHT---TCSEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHc---CCCEEEeCccccc--hhhCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 44467889999999887653222 6788999998888 6888999999999988774 5788874
No 239
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=71.76 E-value=5.2 Score=34.04 Aligned_cols=63 Identities=14% Similarity=0.101 Sum_probs=48.9
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc--CCeEEEeCc
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH--NIPVHMDGA 246 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~--gi~li~Dea 246 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. +++||+ .+
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~---Gv~Gl~v~GtTGE--~~~Lt~~Er~~v~~~~v~~~grvpVia-Gv 83 (313)
T 3dz1_A 19 PFHDDGKIDDVSIDRLTDFYAEV---GCEGVTVLGILGE--APKLDAAEAEAVATRFIKRAKSMQVIV-GV 83 (313)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHT---TCSEEEESTGGGT--GGGSCHHHHHHHHHHHHHHCTTSEEEE-EC
T ss_pred CCCCCCCcCHHHHHHHHHHHHHC---CCCEEEeCccCcC--hhhCCHHHHHHHHHHHHHHcCCCcEEE-ec
Confidence 44467889999999887653222 6788999998888 6888999999999988776 688887 44
No 240
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=70.12 E-value=6.5 Score=33.16 Aligned_cols=61 Identities=13% Similarity=0.167 Sum_probs=47.5
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~~~GttGE--~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 18 PMNQDGSIHYEQLRDLIDWHIEN---GTDGIVAVGTTGE--SATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHT---TCCEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc---CCCEEEeCccccC--cccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44467889999999887653222 6788999998888 6888999999999888774 578887
No 241
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=70.02 E-value=6.5 Score=33.24 Aligned_cols=62 Identities=8% Similarity=0.005 Sum_probs=47.3
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. +++||+=
T Consensus 22 PF~~dg~iD~~~l~~lv~~li~~---Gv~Gl~v~GtTGE--~~~Ls~eEr~~v~~~~~~~~~grvpViaG 86 (303)
T 2wkj_A 22 PFDQQQALDKASLRRLVQFNIQQ---GIDGLYVGGSTGE--AFVQSLSEREQVLEIVAEEAKGKIKLIAH 86 (303)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHT---TCSEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECeeccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 34467889999999887643221 5788999888888 6888999999999888763 5788774
No 242
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=69.81 E-value=5.8 Score=31.42 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=30.4
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
.+++|++|-..|.. |.+.. +.++.++|++||+.++.
T Consensus 159 ~Pa~vicEi~~~~d-G~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDED-GLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTT-CCBCB---HHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCC-CCcCC---HHHHHHHHHHcCCcEEE
Confidence 56888888885677 89999 88889999999999874
No 243
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=69.78 E-value=4.8 Score=34.21 Aligned_cols=63 Identities=16% Similarity=0.178 Sum_probs=48.3
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEeC
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMDG 245 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~De 245 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. +++||+=-
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~v~GtTGE--~~~Ls~~Er~~v~~~~~~~~~grvpviaGv 84 (309)
T 3fkr_A 19 TFADTGDLDLASQKRAVDFMIDA---GSDGLCILANFSE--QFAITDDERDVLTRTILEHVAGRVPVIVTT 84 (309)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHT---TCSCEEESSGGGT--GGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred CCCcCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--cccCCHHHHHHHHHHHHHHhCCCCcEEEec
Confidence 34467889999999887653222 5788999898888 6888999999999988774 57777653
No 244
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=69.74 E-value=6.7 Score=33.14 Aligned_cols=62 Identities=15% Similarity=0.109 Sum_probs=46.9
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 23 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~v~GtTGE--~~~Ls~eEr~~v~~~~~~~~~grvpViaG 87 (301)
T 1xky_A 23 PFDINGNIDFAKTTKLVNYLIDN---GTTAIVVGGTTGE--SPTLTSEEKVALYRHVVSVVDKRVPVIAG 87 (301)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHT---TCCEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCceEEeC
Confidence 34467889999999887643221 5788999888888 6888989999999888764 5777754
No 245
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=69.14 E-value=10 Score=28.42 Aligned_cols=59 Identities=19% Similarity=0.216 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCC-HHHHHHHH-HHHHHcCCeE-EEeCccC
Q psy5413 183 GTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLP-MQWLRELK-ARCQEHNIPV-HMDGARL 248 (285)
Q Consensus 183 ~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~-~~~l~~i~-~la~~~gi~l-i~Dea~~ 248 (285)
...+.+.|.+.+++. ++..|++.-|.|.. |..-+ ....++++ .++++.++++ ++||.++
T Consensus 40 ~~~~~~~l~~li~~~------~~~~ivVGlP~~~n-Gt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDY------TIDKIVLGFPKNMN-GTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTS------EEEEEEEECCCCBT-TBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHc------CCCEEEEeeeecCC-cchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 345889999999885 78899999887776 44433 23345555 3344567764 5699988
No 246
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=68.67 E-value=6.2 Score=33.61 Aligned_cols=61 Identities=16% Similarity=0.172 Sum_probs=47.1
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+
T Consensus 34 Pf~~dg~iD~~~l~~lv~~li~~---Gv~Gl~v~GtTGE--~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 34 PFDAQGRLDWDSLAKLVDFHLQE---GTNAIVAVGTTGE--SATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHH---TCCEEEESSGGGT--GGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44467889999999877543221 5788999998888 6888999999999888764 578887
No 247
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=68.48 E-value=7 Score=33.06 Aligned_cols=63 Identities=10% Similarity=-0.011 Sum_probs=47.1
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEeC
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMDG 245 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~De 245 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=-
T Consensus 27 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~v~GttGE--~~~Ls~~Er~~v~~~~~~~~~grvpviaGv 92 (304)
T 3cpr_A 27 PFTESGDIDIAAGREVAAYLVDK---GLDSLVLAGTTGE--SPTTTAAEKLELLKAVREEVGDRAKLIAGV 92 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHT---TCCEEEESSTTTT--TTTSCHHHHHHHHHHHHHHHTTTSEEEEEC
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEecC
Confidence 34467889999999887653222 5788999888887 6788888899998888763 47777543
No 248
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=68.30 E-value=6.8 Score=32.91 Aligned_cols=61 Identities=18% Similarity=0.154 Sum_probs=47.1
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
|.++++.+|.+.+++.++...+. .+..+++...++. +...+.++-+++.+.+.+. .++||+
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~~~GttGE--~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 12 PMLKDGGVDWKSLEKLVEWHIEQ---GTNSIVAVGTTGE--ASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHH---TCCEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHC---CCCEEEECccccc--cccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 44467889999999887653222 5778999888888 6888989999999988774 578887
No 249
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=67.71 E-value=7.2 Score=32.76 Aligned_cols=63 Identities=11% Similarity=0.118 Sum_probs=46.8
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
|.++++.+|.+.+++.++...+. ..+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~--~Gv~gl~~~GttGE--~~~Ls~~Er~~v~~~~~~~~~grvpviaG 79 (293)
T 1f6k_A 14 SFNEDGTINEKGLRQIIRHNIDK--MKVDGLYVGGSTGE--NFMLSTEEKKEIFRIAKDEAKDQIALIAQ 79 (293)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHT--SCCSEEEESSGGGT--GGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHhh--CCCcEEEeCccccc--hhhCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 34467889999999887653220 15778999888887 6888989999999888763 5777754
No 250
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=67.55 E-value=7.2 Score=32.78 Aligned_cols=63 Identities=13% Similarity=0.052 Sum_probs=47.2
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEeC
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMDG 245 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~De 245 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=-
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~~~GttGE--~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv 77 (292)
T 2ojp_A 12 PMDEKGNVCRASLKKLIDYHVAS---GTSAIVSVGTTGE--SATLNHDEHADVVMMTLDLADGRIPVIAGT 77 (292)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHH---TCCEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccc--hhhCCHHHHHHHHHHHHHHhCCCCcEEEec
Confidence 34467889999999887643222 5788999888888 6888989999999888763 47777543
No 251
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=67.21 E-value=6.9 Score=32.93 Aligned_cols=62 Identities=16% Similarity=0.089 Sum_probs=46.9
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. +++||+=
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~~~GttGE--~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 78 (294)
T 3b4u_A 14 PFKTDGTVDIDAMIAHARRCLSN---GCDSVTLFGTTGE--GCSVGSRERQAILSSFIAAGIAPSRIVTG 78 (294)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHT---TCSEEEESSTTTT--GGGSCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 34467889999999887643221 5788999888888 6888999999999998875 4666643
No 252
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=66.66 E-value=44 Score=26.03 Aligned_cols=63 Identities=13% Similarity=-0.064 Sum_probs=33.9
Q ss_pred HHHHHHHHHhHcCCCcEEEcCChHHHHHHHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeeec
Q psy5413 103 CKELQEKAAKLAGKEAAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTN 179 (285)
Q Consensus 103 ~~~l~~~la~~~g~~~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 179 (285)
..++.+.+++..+.+-.++..+-.+++..+-.. . .|..|+++..+.... +. +.....++.++.
T Consensus 16 l~~~~~~i~~e~~~~i~i~~~~l~~~v~~a~~~--~-~~~dVIISRGgta~~-----lr------~~~~iPVV~I~~ 78 (196)
T 2q5c_A 16 LLNLFPKLALEKNFIPITKTASLTRASKIAFGL--Q-DEVDAIISRGATSDY-----IK------KSVSIPSISIKV 78 (196)
T ss_dssp HHHHHHHHHHHHTCEEEEEECCHHHHHHHHHHH--T-TTCSEEEEEHHHHHH-----HH------TTCSSCEEEECC
T ss_pred HHHHHHHHHhhhCCceEEEECCHHHHHHHHHHh--c-CCCeEEEECChHHHH-----HH------HhCCCCEEEEcC
Confidence 444444555544554346666667777776665 3 455577665432221 11 233566677765
No 253
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=66.50 E-value=7.6 Score=33.34 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=46.7
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+
T Consensus 45 PF~~dg~iD~~~l~~lv~~li~~---Gv~Gl~v~GtTGE--~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 45 PADEAGRVDIEAFSALIARLDAA---EVDSVGILGSTGI--YMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp CBCTTCCBCHHHHHHHHHHHHHH---TCSEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 33457889999999887643222 5788999888888 6888999999999988764 478776
No 254
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=65.16 E-value=9.7 Score=33.10 Aligned_cols=61 Identities=20% Similarity=0.144 Sum_probs=46.8
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+
T Consensus 70 PF~~dg~ID~~al~~lv~~li~~---Gv~Gl~v~GTTGE--~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 70 PYLPDGRFDLEAYDDLVNIQIQN---GAEGVIVGGTTGE--GQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHT---TCCEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc---CCCEEEecccccC--hhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 44467889999999887653222 6789999898888 6888888888888877763 578877
No 255
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=65.00 E-value=5.7 Score=33.84 Aligned_cols=61 Identities=13% Similarity=0.114 Sum_probs=47.3
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+
T Consensus 35 Pf~~dg~iD~~~l~~lv~~li~~---Gv~Gi~v~GtTGE--~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 35 PFAADGGLDLPALGRSIERLIDG---GVHAIAPLGSTGE--GAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHT---TCSEEECSSGGGT--GGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44467889999999887653222 6788999898888 6888999999999988774 577777
No 256
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=64.34 E-value=8.4 Score=33.27 Aligned_cols=64 Identities=20% Similarity=0.058 Sum_probs=47.3
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++.+++.+.+-..+++||+=-.
T Consensus 37 PF~~dg~ID~~~l~~lv~~li~~---Gv~Gl~v~GtTGE--~~~Ls~eEr~~vi~~~~~grvpViaGvg 100 (344)
T 2hmc_A 37 PCRQDRTPDFDALVRKGKELIAD---GMSAVVYCGSMGD--WPLLTDEQRMEGVERLVKAGIPVIVGTG 100 (344)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHT---TCCCEEESSGGGT--GGGSCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCCCCcCHHHHHHHHHHHHHc---CCCEEEeCccCcC--hhhCCHHHHHHHHHHHhCCCCcEEEecC
Confidence 34457889999999887653222 5778889888887 6888988899998885455688876533
No 257
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=64.23 E-value=8.8 Score=32.20 Aligned_cols=62 Identities=18% Similarity=0.132 Sum_probs=46.3
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEeC
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMDG 245 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~De 245 (285)
|.++++ +|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=-
T Consensus 13 Pf~~dg-iD~~~l~~lv~~li~~---Gv~gl~~~GttGE--~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv 77 (291)
T 3a5f_A 13 PFTNTG-VDFDKLSELIEWHIKS---KTDAIIVCGTTGE--ATTMTETERKETIKFVIDKVNKRIPVIAGT 77 (291)
T ss_dssp CBCSSS-BCHHHHHHHHHHHHHT---TCCEEEESSGGGT--GGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred CcCCCC-cCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEEeC
Confidence 344578 9999999887653221 5788999888888 6888988899999888763 47777543
No 258
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=64.06 E-value=7.7 Score=33.48 Aligned_cols=61 Identities=13% Similarity=0.087 Sum_probs=46.3
Q ss_pred cCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 179 NQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 179 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 43 F~~dg~ID~~~l~~lv~~li~~---Gv~Gl~v~GtTGE--~~~Ls~eEr~~vi~~~ve~~~grvpViaG 106 (343)
T 2v9d_A 43 FTADGQLDKPGTAALIDDLIKA---GVDGLFFLGSGGE--FSQLGAEERKAIARFAIDHVDRRVPVLIG 106 (343)
T ss_dssp BCTTSSBCHHHHHHHHHHHHHT---TCSCEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHc---CCCEEEeCccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 3457889999999887643222 5778889888887 6888989999999888764 5777754
No 259
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=63.68 E-value=6.7 Score=33.43 Aligned_cols=61 Identities=15% Similarity=0.116 Sum_probs=47.3
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. +++||+
T Consensus 33 Pf~~dg~iD~~~l~~li~~li~~---Gv~Gl~v~GtTGE--~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 33 PFDDNGAIDEKAFCNFVEWQITQ---GINGVSPVGTTGE--SPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHT---TCSEEECSSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHc---CCCEEEeCccccC--ccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34467889999999887653222 6788999888888 6888999999999988774 578887
No 260
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=63.04 E-value=5.2 Score=35.77 Aligned_cols=24 Identities=17% Similarity=0.407 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
++++++++++.||++||-||+|-|
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 457799999999999999999999
No 261
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=61.36 E-value=6.7 Score=33.32 Aligned_cols=62 Identities=19% Similarity=0.174 Sum_probs=47.5
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~~---Gv~Gl~v~GtTGE--~~~Ls~~Er~~v~~~~~~~~~grvpViaG 82 (311)
T 3h5d_A 18 PFHEDGSINFDAIPALIEHLLAH---HTDGILLAGTTAE--SPTLTHDEELELFAAVQKVVNGRVPLIAG 82 (311)
T ss_dssp CBCTTSSBCTTHHHHHHHHHHHT---TCCCEEESSTTTT--GGGSCHHHHHHHHHHHHHHSCSSSCEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 44467889999988887553222 6788999888888 7888999999999988875 5788773
No 262
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=60.90 E-value=7.2 Score=33.21 Aligned_cols=62 Identities=15% Similarity=0.090 Sum_probs=47.3
Q ss_pred ecCC-CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 178 TNQK-DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 178 ~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
|.++ ++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 22 Pf~~~dg~iD~~~l~~lv~~li~~---Gv~Gl~v~GtTGE--~~~Ls~eEr~~v~~~~v~~~~grvpViaG 87 (316)
T 3e96_A 22 PFRKSDGSIDWHHYKETVDRIVDN---GIDVIVPCGNTSE--FYALSLEEAKEEVRRTVEYVHGRALVVAG 87 (316)
T ss_dssp CBCTTTCCBCHHHHHHHHHHHHTT---TCCEECTTSGGGT--GGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CccCCCCCCCHHHHHHHHHHHHHc---CCCEEEeCccccC--cccCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 4446 7889999999887653222 6788998888887 6888888899999888774 5777764
No 263
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=59.81 E-value=24 Score=23.29 Aligned_cols=47 Identities=13% Similarity=0.090 Sum_probs=33.9
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++..++|+.. +.++|++.+-- +++....+..+|++++++++.-...
T Consensus 16 ~~~v~kai~~g------kaklViiA~D~--------~~~~~~~i~~lc~~~~Ip~~~v~sk 62 (82)
T 3v7e_A 16 TKQTVKALKRG------SVKEVVVAKDA--------DPILTSSVVSLAEDQGISVSMVESM 62 (82)
T ss_dssp HHHHHHHHTTT------CEEEEEEETTS--------CHHHHHHHHHHHHHHTCCEEEESCH
T ss_pred HHHHHHHHHcC------CeeEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEECCH
Confidence 45666777652 67888884422 2356899999999999999886643
No 264
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=59.62 E-value=3.1 Score=34.93 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=46.3
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
|.++++.+|.+.+++.++... .. +..|++...++. +...+.++-+++.+.+.+ +++||+=
T Consensus 9 Pf~~dg~iD~~~l~~lv~~li---~~-v~gl~v~GttGE--~~~Ls~~Er~~v~~~~~~-rvpviaG 68 (283)
T 2pcq_A 9 PFDREGRLDEEAFRELAQALE---PL-VDGLLVYGSNGE--GVHLTPEERARGLRALRP-RKPFLVG 68 (283)
T ss_dssp CBCTTCCBCHHHHHHHHHHHG---GG-SSCCEETCTTTT--GGGSCHHHHHHHHHTCCC-SSCCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHH---hh-CCEEEECCcCcC--chhcCHHHHHHHHHHHHh-CCcEEEe
Confidence 344678899999999887532 12 667888888887 688999999999998888 7777754
No 265
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=59.32 E-value=6.9 Score=33.06 Aligned_cols=59 Identities=15% Similarity=0.063 Sum_probs=46.2
Q ss_pred CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc----CCeEEEe
Q psy5413 181 KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH----NIPVHMD 244 (285)
Q Consensus 181 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~----gi~li~D 244 (285)
+++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. +++||+=
T Consensus 21 ~dg~iD~~~l~~lv~~li~~---Gv~gl~v~GttGE--~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG 83 (301)
T 3m5v_A 21 KNGKVDEQSYARLIKRQIEN---GIDAVVPVGTTGE--SATLTHEEHRTCIEIAVETCKGTKVKVLAG 83 (301)
T ss_dssp ETTEECHHHHHHHHHHHHHT---TCCEEECSSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCCeEEEe
Confidence 56789999999887653222 6788999888887 6888889999999888774 5888883
No 266
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=58.39 E-value=8.6 Score=32.75 Aligned_cols=58 Identities=17% Similarity=0.198 Sum_probs=46.3
Q ss_pred CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 181 KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 181 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
+++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+
T Consensus 25 ~dg~iD~~~l~~lv~~li~~---Gv~gl~v~GtTGE--~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 25 KTDTLDLASQERYYAYLARS---GLTGLVILGTNAE--AFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp TTTEECHHHHHHHHHHHHTT---TCSEEEESSGGGT--GGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHc---CCCEEEeCccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 57789999999887653222 6789999999988 6888889999999988774 578887
No 267
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=57.78 E-value=7.1 Score=26.14 Aligned_cols=20 Identities=20% Similarity=0.120 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCeEEEeCc
Q psy5413 227 LRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea 246 (285)
=.+|+++|+++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 57899999999999999965
No 268
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=56.06 E-value=8.5 Score=32.73 Aligned_cols=60 Identities=8% Similarity=0.071 Sum_probs=45.2
Q ss_pred CCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 180 QKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 180 ~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. +++||+=
T Consensus 25 ~~dg~iD~~~l~~lv~~li~~---Gv~gl~v~GtTGE--~~~Ls~eEr~~vi~~~~~~~~grvpViaG 87 (314)
T 3d0c_A 25 EGTREIDWKGLDDNVEFLLQN---GIEVIVPNGNTGE--FYALTIEEAKQVATRVTELVNGRATVVAG 87 (314)
T ss_dssp TTTCCBCHHHHHHHHHHHHHT---TCSEECTTSGGGT--GGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHc---CCCEEEECcccCC--hhhCCHHHHHHHHHHHHHHhCCCCeEEec
Confidence 467889999999887643222 5778888888877 6788888888888888763 5777763
No 269
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=55.99 E-value=12 Score=31.31 Aligned_cols=55 Identities=15% Similarity=0.074 Sum_probs=43.2
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH 237 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~ 237 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+.
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~~~GttGE--~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 10 PFTKDNRIDKEKLKIHAENLIRK---GIDKLFVNGTTGL--GPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHT---TCCEEEESSTTTT--GGGSCHHHHHHHHHHHHTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHH
Confidence 34467889999999887643221 5788999888888 6888999999999998875
No 270
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=55.14 E-value=12 Score=31.46 Aligned_cols=59 Identities=14% Similarity=0.111 Sum_probs=45.0
Q ss_pred CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEeC
Q psy5413 182 DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMDG 245 (285)
Q Consensus 182 ~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~De 245 (285)
++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=-
T Consensus 15 dg~iD~~~l~~lv~~li~~---Gv~gl~~~GttGE--~~~Ls~~Er~~v~~~~~~~~~grvpviaGv 76 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDN---GTDAILVCGTTGE--SPTLTFEEHEKVIEFAVKRAAGRIKVIAGT 76 (294)
T ss_dssp TTEECHHHHHHHHHHHHTT---TCCEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSEEEEEC
T ss_pred CCCcCHHHHHHHHHHHHHC---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEEec
Confidence 6789999999887653221 5788999888887 6888988999999888763 47777543
No 271
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=54.77 E-value=80 Score=25.21 Aligned_cols=93 Identities=11% Similarity=-0.091 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHhHcCCCcEEEc--CChHHHHHHHHHHccccCCCeEEecCCcceeeecccccccccccccccceeeeeee
Q psy5413 101 PTCKELQEKAAKLAGKEAAIFV--PSGTMGNLIAIMTHCDRRDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVT 178 (285)
Q Consensus 101 ~~~~~l~~~la~~~g~~~~~~~--~~Gs~a~~~al~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~ 178 (285)
+...++.+.++..++.+..+.. .+-.+++..+-...- ..|-.||++..+.... +. +.....++.++
T Consensus 22 ~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~~~-~~~~dVIISRGgta~~-----Lr------~~~~iPVV~I~ 89 (225)
T 2pju_A 22 TRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLA-NERCDAIIAAGSNGAY-----LK------SRLSVPVILIK 89 (225)
T ss_dssp HHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHHTT-TSCCSEEEEEHHHHHH-----HH------TTCSSCEEEEC
T ss_pred HHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHHHh-cCCCeEEEeCChHHHH-----HH------hhCCCCEEEec
Confidence 3344455555554444333333 445667777666432 2344577665433221 11 23356667776
Q ss_pred cCCCCCCCHHHHHHHhcccccccCCceEEEEEec
Q psy5413 179 NQKDGTFDLDEMEAKFSTADNIHCASTSLVCVEN 212 (285)
Q Consensus 179 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~ 212 (285)
. +.-++-++|.+.. ..+.++++|-..+
T Consensus 90 v------s~~Dil~aL~~a~-~~~~kIavVg~~~ 116 (225)
T 2pju_A 90 P------SGYDVLQFLAKAG-KLTSSIGVVTYQE 116 (225)
T ss_dssp C------CHHHHHHHHHHTT-CTTSCEEEEEESS
T ss_pred C------CHHHHHHHHHHHH-hhCCcEEEEeCch
Confidence 5 3344444444322 1334566665533
No 272
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=53.85 E-value=11 Score=31.51 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=44.5
Q ss_pred CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 182 DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 182 ~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 15 dg~iD~~~l~~lv~~li~~---Gv~gl~~~GttGE--~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 75 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIEN---GVSGIVAVGTTGE--SPTLSHEEHKKVIEKVVDVVNGRVQVIAG 75 (289)
T ss_dssp TTEECHHHHHHHHHHHHHT---TCSEEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCcCHHHHHHHHHHHHHC---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 6789999999887643221 5788999888888 6888988999999888763 4777754
No 273
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=53.57 E-value=11 Score=31.48 Aligned_cols=55 Identities=15% Similarity=0.157 Sum_probs=43.0
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH 237 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~ 237 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+.
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~v~GtTGE--~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 10 PFDKQGKVNVDALKTHAKNLLEK---GIDAIFVNGTTGL--GPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHT---TCCEEEETSTTTT--GGGSCHHHHHHHHHHHTTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHH
Confidence 34467889999999887643221 5788999888888 6888999999999998875
No 274
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=53.11 E-value=18 Score=29.17 Aligned_cols=35 Identities=17% Similarity=0.088 Sum_probs=28.9
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
++++|++|-.+ .. |.+.. +.++.++|++||+.++.
T Consensus 178 ~Pa~VicEi~~-dd-G~mar---~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 178 VPITTICEMMG-DD-GNAMS---KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSEEEEEEEBC-TT-SSBCC---HHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeC-CC-CCcCC---HHHHHHHHHHcCCcEEE
Confidence 56788888775 44 89999 88888999999999875
No 275
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=52.74 E-value=11 Score=31.78 Aligned_cols=58 Identities=21% Similarity=0.201 Sum_probs=44.9
Q ss_pred CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 182 DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 182 ~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 27 dg~iD~~~l~~lv~~li~~---Gv~gl~v~GtTGE--~~~Ls~eEr~~vi~~~~~~~~grvpViaG 87 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLEN---GVNALIVLGTTGE--SPTVNEDEREKLVSRTLEIVDGKIPVIVG 87 (306)
T ss_dssp TTEECHHHHHHHHHHHHHT---TCCEEEESSGGGT--GGGCCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc---CCCEEEeCccccc--hhhCCHHHHHHHHHHHHHHhCCCCeEEEc
Confidence 6789999999887643221 5788999898888 6888999999999888764 5777754
No 276
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=52.56 E-value=9.4 Score=34.04 Aligned_cols=23 Identities=13% Similarity=0.317 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++||-||+|-|
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 67799999999999999999999
No 277
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=52.49 E-value=6 Score=33.42 Aligned_cols=61 Identities=11% Similarity=-0.006 Sum_probs=46.0
Q ss_pred ecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEE
Q psy5413 178 TNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHM 243 (285)
Q Consensus 178 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~ 243 (285)
|.++++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+
T Consensus 15 Pf~~dg~iD~~~l~~lv~~li~~---Gv~gl~v~GttGE--~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 15 PVDAEGRVRADVMGRLCDDLIQA---GVHGLTPLGSTGE--FAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHT---TCSCBBTTSGGGT--GGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--ccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34467889999999887653222 5678888888877 6888888899999888774 577776
No 278
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=52.14 E-value=10 Score=34.07 Aligned_cols=24 Identities=17% Similarity=0.026 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++++++++.||++||-||+|-|.
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 688999999999999999999983
No 279
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=52.00 E-value=10 Score=34.50 Aligned_cols=24 Identities=8% Similarity=-0.087 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++++++++.||++||-||+|-|.
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEec
Confidence 688999999999999999999993
No 280
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=51.82 E-value=11 Score=34.05 Aligned_cols=23 Identities=17% Similarity=0.091 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++||-||+|-|
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEc
Confidence 68899999999999999999998
No 281
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=51.58 E-value=20 Score=28.44 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=28.6
Q ss_pred ceEEEEEecc-cCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 204 STSLVCVENT-HNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 204 ~~~~v~i~~~-~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
.+++|++|-+ .|.. |.+.. +.++.++|++||+.++.
T Consensus 158 ~Pa~vicEiv~~~~d-G~mar---~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDE-GSMAH---TDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSST-TSBCC---HHHHHHHHHHHTCEEEE
T ss_pred CceEEEEEEeeeCCC-CCcCC---HHHHHHHHHHcCCcEEE
Confidence 5678888882 3445 89999 88889999999999874
No 282
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=51.26 E-value=11 Score=33.48 Aligned_cols=25 Identities=20% Similarity=0.045 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
+.++++++++.||++|+-||+|-+.
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3788999999999999999999993
No 283
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.15 E-value=34 Score=23.32 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=31.6
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
.++..++|+.. +.++|++..- .|.+..++|..+|++++++++.-
T Consensus 20 ~~~v~kai~~g------ka~lViiA~D--------~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 20 SNETIRLAKTG------GAKLIIVAKN--------APKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHHT------CCSEEEEECC--------CCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcC------CccEEEEeCC--------CCHHHHHHHHHHHHHcCCCEEEe
Confidence 45677777652 5677777432 35677999999999999997543
No 284
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=50.86 E-value=11 Score=33.91 Aligned_cols=24 Identities=17% Similarity=0.063 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++||-||+|-|
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 368899999999999999999998
No 285
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=50.44 E-value=12 Score=33.32 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++|+-||+|-|
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeC
Confidence 67899999999999999999999
No 286
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=50.25 E-value=11 Score=25.82 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCeEEEeCc
Q psy5413 227 LRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea 246 (285)
=.+|+++|+++|++++.|..
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEECHH
Confidence 57899999999999999965
No 287
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=50.19 E-value=35 Score=24.78 Aligned_cols=42 Identities=12% Similarity=0.228 Sum_probs=28.4
Q ss_pred HHHHHHhc-ccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 188 DEMEAKFS-TADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 188 ~~l~~~i~-~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.+..++. . ++.+|+++. |...+ +++.++|+++|++++.=.-
T Consensus 64 ~~~l~a~~~~-------~~~~iIlt~------g~~~~----~~i~~~A~~~~ipvl~t~~ 106 (139)
T 2ioj_A 64 DLLLTALEMP-------NVRCLILTG------NLEPV----QLVLTKAEERGVPVILTGH 106 (139)
T ss_dssp HHHHHHTTCT-------TEEEEEEET------TCCCC----HHHHHHHHHHTCCEEECSS
T ss_pred HHHHHHHhCC-------CCcEEEEcC------CCCCC----HHHHHHHHHCCCeEEEECC
Confidence 44556665 5 688888854 33344 6666888899999986443
No 288
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=50.00 E-value=9.7 Score=26.31 Aligned_cols=20 Identities=10% Similarity=0.285 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCeEEEeCc
Q psy5413 227 LRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea 246 (285)
=.+|+++|++||++++.|..
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 57899999999999999965
No 289
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=49.94 E-value=12 Score=32.84 Aligned_cols=24 Identities=13% Similarity=0.022 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++++++++.||++|+-||+|-+.
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECc
Confidence 578999999999999999999993
No 290
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=49.07 E-value=12 Score=33.51 Aligned_cols=23 Identities=17% Similarity=0.199 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++||-||+|-|
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 67899999999999999999999
No 291
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=48.04 E-value=11 Score=26.11 Aligned_cols=20 Identities=20% Similarity=0.282 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCeEEEeCc
Q psy5413 227 LRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea 246 (285)
=.+|+++|+++|++++.|..
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCeecCHH
Confidence 57899999999999999965
No 292
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=47.80 E-value=26 Score=27.98 Aligned_cols=35 Identities=26% Similarity=0.166 Sum_probs=27.9
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
.+++|+++-. |.. |.+.. +.++.++|++||+.++.
T Consensus 167 ~Pa~vicEi~-~~d-G~mar---~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAGVLCELT-NDD-GTMAR---APECIEFANKHNMALVT 201 (217)
T ss_dssp CSCEEEEEBB-CTT-SSBCC---HHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEEe-CCC-CCccC---HHHHHHHHHHcCCCEEE
Confidence 5678887766 444 88999 88889999999998774
No 293
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=47.42 E-value=13 Score=33.38 Aligned_cols=23 Identities=13% Similarity=0.445 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++|+-||+|-|
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 57799999999999999999998
No 294
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=47.26 E-value=46 Score=27.68 Aligned_cols=42 Identities=10% Similarity=0.014 Sum_probs=32.7
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEE
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVH 242 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li 242 (285)
++.++.+.+. ..++|++++-. -.+.+ -+++.+.|++||+.++
T Consensus 234 ~dti~~~~~a-------g~~~ivi~~g~----si~~~---~~~~i~~a~~~gi~~~ 275 (283)
T 4ggi_A 234 VATIHRAARA-------GLAGIVGEAGR----LLVVD---REAVIAAADDLGLFVL 275 (283)
T ss_dssp HHHHHHHHHT-------TCCEEEEETTB----CEETT---HHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHc-------CCeEEEEcCCC----cEEeC---HHHHHHHHHHcCCEEE
Confidence 4888888877 78888886544 24467 6889999999999987
No 295
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=46.76 E-value=16 Score=30.62 Aligned_cols=59 Identities=12% Similarity=0.137 Sum_probs=45.3
Q ss_pred CCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 180 QKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 180 ~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
+++ .+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 16 ~~d-~iD~~~l~~lv~~li~~---Gv~gl~v~GttGE--~~~Lt~~Er~~v~~~~~~~~~grvpviaG 77 (292)
T 3daq_A 16 TNN-KVNLEALKAHVNFLLEN---NAQAIIVNGTTAE--SPTLTTDEKELILKTVIDLVDKRVPVIAG 77 (292)
T ss_dssp ETT-EECHHHHHHHHHHHHHT---TCCEEEESSGGGT--GGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCC-CcCHHHHHHHHHHHHHc---CCCEEEECccccc--cccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 356 89999999887653222 6789999898887 6888889889999888774 5788873
No 296
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=46.68 E-value=16 Score=32.95 Aligned_cols=24 Identities=17% Similarity=0.238 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++||-||+|-|
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEec
Confidence 367899999999999999999999
No 297
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=46.17 E-value=15 Score=32.69 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
+.++++++++.||++|+-||+|-+.
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3588999999999999999999983
No 298
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=45.97 E-value=15 Score=33.62 Aligned_cols=24 Identities=17% Similarity=0.077 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++||-||+|-|
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 367899999999999999999999
No 299
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=45.97 E-value=14 Score=33.30 Aligned_cols=23 Identities=13% Similarity=0.153 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++||-||+|-|
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 68899999999999999999999
No 300
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=45.96 E-value=13 Score=32.76 Aligned_cols=24 Identities=29% Similarity=0.274 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++++++++.||++||-||+|-+.
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~ 97 (422)
T 1ua7_A 74 EQEFKEMCAAAEEYGIKVIVDAVI 97 (422)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 577999999999999999999993
No 301
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=45.90 E-value=15 Score=33.46 Aligned_cols=24 Identities=33% Similarity=0.457 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++||-||+|-|
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 357799999999999999999999
No 302
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=45.54 E-value=15 Score=32.86 Aligned_cols=24 Identities=29% Similarity=0.404 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++|+-||+|-+
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 368899999999999999999998
No 303
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=45.31 E-value=11 Score=31.69 Aligned_cols=59 Identities=14% Similarity=0.085 Sum_probs=44.6
Q ss_pred CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 181 KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 181 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
+++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 14 ~dg~iD~~~l~~lv~~li~~---Gv~gi~v~GttGE--~~~Ls~~Er~~v~~~~~~~~~grvpviaG 75 (297)
T 2rfg_A 14 INGQVDEKALAGLVDWQIKH---GAHGLVPVGTTGE--SPTLTEEEHKRVVALVAEQAQGRVPVIAG 75 (297)
T ss_dssp ETTEECHHHHHHHHHHHHHT---TCSEEECSSGGGT--GGGSCHHHHHHHHHHHHHHHTTSSCBEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc---CCCEEEECccccc--hhhCCHHHHHHHHHHHHHHhCCCCeEEEc
Confidence 56789999998887643221 5788998888887 6888988899998888763 4777754
No 304
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=45.12 E-value=30 Score=28.14 Aligned_cols=51 Identities=8% Similarity=0.059 Sum_probs=33.8
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCC----CCeeeCCHHH---HHHHHHHHHHcCCeEEEeC
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNY----CGGTVLPMQW---LRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~----~gG~~~~~~~---l~~i~~la~~~gi~li~De 245 (285)
++.++++++. .+.+|.+-..+.+ . |..-+.+. .+++.++|++||+.+|+++
T Consensus 46 ~~~~~~al~~-------Gv~~vqlR~K~~~~~~~~-~~l~~~~~~~~a~~l~~l~~~~~~~liInd 103 (243)
T 3o63_A 46 AQFAEAALAG-------GVDIIQLRDKGSPGELRF-GPLQARDELAACEILADAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHHHHHT-------TCSEEEECCTTCHHHHHH-CSCCHHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHC-------CCCEEEEccCCCCccccc-cCCCHHHHHHHHHHHHHHHHhhCCEEEEeC
Confidence 5677778866 6778888665521 0 11222232 4789999999999999954
No 305
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=44.45 E-value=1.3e+02 Score=24.61 Aligned_cols=52 Identities=6% Similarity=0.150 Sum_probs=34.0
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC--ChhhhcccCCeEEEe
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL--PLAEVCASVDTVMFC 263 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~--~~~~~~~~~dv~~~s 263 (285)
+..++++.. ..+.+.+.++.+.++++|+.+++|-... .+..+...+|++..+
T Consensus 131 ~~~~v~~~g--------~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~ll~~~dil~~N 184 (299)
T 3ikh_A 131 AGDILLQQG--------NFSLDKTRALFQYARSRGMTTVFNPSPVNPDFCHLWPLIDIAVVN 184 (299)
T ss_dssp TTCEEEECS--------CSCHHHHHHHHHHHHHTTCEEEECCCSCCGGGGGCGGGCSEEEEE
T ss_pred cCCEEEECC--------CCCHHHHHHHHHHHHHcCCEEEEccccchhhHHHHHhhCCEEEec
Confidence 345666632 2346778999999999999999997643 223344556655433
No 306
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=44.21 E-value=36 Score=27.43 Aligned_cols=36 Identities=17% Similarity=0.016 Sum_probs=28.6
Q ss_pred ceEEEEEecccCC----------CCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 204 STSLVCVENTHNY----------CGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 204 ~~~~v~i~~~~n~----------~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
.+++|++|-.+.- . |.+.. +.++.++|++||+.++.
T Consensus 167 ~PagVicEi~~~~~~~~~~~~~~d-G~mar---~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 167 RPVAVISEIVDDGQEVEGRAVRAA-PGMLR---GDECVAFARRWGLKVCT 212 (233)
T ss_dssp CSBEEEEEBEECCEECTTSSCEES-CEECC---HHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEeCCCcccccccccCCC-CCcCC---HHHHHHHHHHcCCcEEE
Confidence 5678888776541 4 89999 88889999999999875
No 307
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=43.59 E-value=10 Score=31.82 Aligned_cols=59 Identities=10% Similarity=-0.023 Sum_probs=44.6
Q ss_pred CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc---CCeEEEe
Q psy5413 181 KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH---NIPVHMD 244 (285)
Q Consensus 181 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~---gi~li~D 244 (285)
+++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+. .++||+=
T Consensus 14 ~dg~iD~~~l~~lv~~li~~---Gv~gl~~~GttGE--~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 75 (292)
T 2vc6_A 14 ADDRIDEVALHDLVEWQIEE---GSFGLVPCGTTGE--SPTLSKSEHEQVVEITIKTANGRVPVIAG 75 (292)
T ss_dssp ETTEECHHHHHHHHHHHHHT---TCSEEETTSGGGT--GGGSCHHHHHHHHHHHHHHHTTSSCBEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 56789999999887643221 5778888888887 6788988899999888764 4777654
No 308
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=43.28 E-value=16 Score=32.82 Aligned_cols=23 Identities=30% Similarity=0.465 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++|+-||+|-|
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeC
Confidence 57899999999999999999998
No 309
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=42.58 E-value=20 Score=31.66 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++++++++.||++|+-||+|-+.
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECC
Confidence 577999999999999999999983
No 310
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=41.73 E-value=70 Score=25.33 Aligned_cols=129 Identities=11% Similarity=0.140 Sum_probs=70.5
Q ss_pred cHHHHHHHHhccc-CCCCccCChhHHHHHHHHHhHcCCCc---EEEcCChHHHHHHHHHHccccCCCeEE--ec-CCcce
Q psy5413 80 TMEMKNYMFNCEV-GDDVYLEDPTCKELQEKAAKLAGKEA---AIFVPSGTMGNLIAIMTHCDRRDSEII--VG-DCSHI 152 (285)
Q Consensus 80 ~~~v~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~g~~~---~~~~~~Gs~a~~~al~~~~~~~g~~vi--~~-~~~h~ 152 (285)
...+++.+..... |...|+. -..+|.+.+.+.+|.+. +++...|..+...+-.......+-+++ ++ ++.+
T Consensus 46 ~~qiRkDls~fg~~G~~g~GY--~V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~- 122 (212)
T 3keo_A 46 SATVRRDFSYFGELGRRGFGY--DVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSND- 122 (212)
T ss_dssp HHHHHHHHHTTGGGTTTSSSE--EHHHHHHHHHHHTTTTSCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTST-
T ss_pred HHHHHHHHHHHhhcCCCCCCE--EHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchh-
Confidence 3355555543222 3445543 37889999999988654 467777776654322211111221222 12 2210
Q ss_pred eeecccccccccccccccce-eeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHH
Q psy5413 153 MLWEQGGASQTSVYSQIGRV-LMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELK 231 (285)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~ 231 (285)
..|. .+..+|. .+++++++.+++. ++..++++-|... -++++
T Consensus 123 ----------------kiG~~~i~GvpV-----~~~~dL~~~v~~~------~Id~vIIAvPs~~----------aq~v~ 165 (212)
T 3keo_A 123 ----------------LVGKTTEDGIPV-----YGISTINDHLIDS------DIETAILTVPSTE----------AQEVA 165 (212)
T ss_dssp ----------------TTTCBCTTCCBE-----EEGGGHHHHC-CC------SCCEEEECSCGGG----------HHHHH
T ss_pred ----------------ccCceeECCeEE-----eCHHHHHHHHHHc------CCCEEEEecCchh----------HHHHH
Confidence 0011 1112222 1245678888763 5677777666642 57899
Q ss_pred HHHHHcCCeEEEeCccC
Q psy5413 232 ARCQEHNIPVHMDGARL 248 (285)
Q Consensus 232 ~la~~~gi~li~Dea~~ 248 (285)
+.|.+.|+--|..=+..
T Consensus 166 d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 166 DILVKAGIKGILSFSPV 182 (212)
T ss_dssp HHHHHHTCCEEEECSSS
T ss_pred HHHHHcCCCEEEEcCCc
Confidence 99999999888876644
No 311
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=41.28 E-value=79 Score=27.27 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=34.1
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCC-HHHHHHHHHHHHHcCCeEEE
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLP-MQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~-~~~l~~i~~la~~~gi~li~ 243 (285)
++.+.++..++. ..+.|+++..-+ |.+.+ ++.++.|.+ +.+.|++|+.
T Consensus 241 ~~~~~l~a~~~~-------g~~GiVle~~G~---Gn~p~~~~~~~~l~~-a~~~Gi~VV~ 289 (358)
T 2him_A 241 ISADVVRNFLRQ-------PVKALILRSYGV---GNAPQNKAFLQELQE-ASDRGIVVVN 289 (358)
T ss_dssp CCHHHHHHHTSS-------SCSEEEEEEBTT---TBCCCCHHHHHHHHH-HHHTTCEEEE
T ss_pred CCHHHHHHHHhC-------CCCEEEEecCCC---CCCCCcHHHHHHHHH-HHHCCCEEEE
Confidence 578888888866 678999988554 66654 566777777 4567877653
No 312
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=41.07 E-value=19 Score=33.52 Aligned_cols=23 Identities=17% Similarity=0.146 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++|+-||+|-|
T Consensus 208 ~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 208 KGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 57899999999999999999998
No 313
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=40.81 E-value=19 Score=33.15 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++||-||+|-|
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 367899999999999999999999
No 314
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=40.57 E-value=44 Score=22.81 Aligned_cols=43 Identities=12% Similarity=0.065 Sum_probs=30.9
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
.+...++|+.. +.++|++..- .|.+...+|..+|++++++++.
T Consensus 21 ~~~v~kai~~g------ka~lViiA~D--------~~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 21 ARKSIQYAKMG------GAKLIIVARN--------ARPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp HHHHHHHHHHT------CCSEEEEETT--------SCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcC------CCcEEEEeCC--------CCHHHHHHHHHHHHhcCCCEEE
Confidence 45667777652 5677777432 3466789999999999999765
No 315
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=40.31 E-value=20 Score=33.67 Aligned_cols=58 Identities=17% Similarity=0.217 Sum_probs=38.2
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCC--Ce-----------eeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYC--GG-----------TVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~--gG-----------~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
|++-|.+.|.--.+. .+-+|.+.++.... .| ..=+.++++++++.||++||-||+|-|
T Consensus 237 dl~Gi~~kLdYLk~L---Gvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 237 DLIGIKEKIDHLVNL---GINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp CHHHHHHTHHHHHHH---TCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHc---CCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 677777665321111 45677776642211 11 122468899999999999999999999
No 316
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=40.20 E-value=20 Score=33.33 Aligned_cols=24 Identities=8% Similarity=0.077 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++|+-||+|-+
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEC
Confidence 457899999999999999999999
No 317
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=39.90 E-value=20 Score=30.49 Aligned_cols=23 Identities=22% Similarity=0.133 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.+.++++++.|+++|+.+|+|--
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 46789999999999999999943
No 318
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=39.76 E-value=21 Score=32.85 Aligned_cols=24 Identities=29% Similarity=0.285 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++||-||+|-|
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 357899999999999999999999
No 319
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=39.53 E-value=50 Score=22.54 Aligned_cols=44 Identities=16% Similarity=0.305 Sum_probs=31.1
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
.+...++|+.. +.++|++..-- ++...++|..+|++++++++.-
T Consensus 23 ~~~v~kai~~g------ka~lViiA~D~--------~~~~~~~i~~~c~~~~ip~~~~ 66 (101)
T 3on1_A 23 EEQVVKAVQNG------QVTLVILSSDA--------GIHTKKKLLDKCGSYQIPVKVV 66 (101)
T ss_dssp HHHHHHHHHTT------CCSEEEEETTS--------CHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcC------CCcEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEe
Confidence 45677777652 56788875433 2334888999999999998854
No 320
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=39.38 E-value=49 Score=23.07 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=30.7
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
.+...++|+.. +.++|++.. .. |.+....|..+|++++++++.
T Consensus 26 ~~~v~kai~~g------ka~lViiA~-------D~-~~~~~~~l~~~c~~~~Vp~~~ 68 (110)
T 3cpq_A 26 SKRTIKFVKHG------EGKLVVLAG-------NI-PKDLEEDVKYYAKLSNIPVYQ 68 (110)
T ss_dssp HHHHHHHHHTT------CCSEEEECT-------TC-BHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcC------CceEEEEeC-------CC-CHHHHHHHHHHHHHcCCCEEE
Confidence 45667777652 567777732 22 567789999999999999664
No 321
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=39.37 E-value=20 Score=33.25 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
+.++++++++.||++||-||+|-|.-
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~N 243 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFN 243 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 36889999999999999999999933
No 322
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=39.29 E-value=21 Score=29.44 Aligned_cols=21 Identities=19% Similarity=0.083 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHcCCeEEEeC
Q psy5413 225 QWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~De 245 (285)
+.++++.++|+++|+.||+|-
T Consensus 90 ~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 90 DDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEe
Confidence 457899999999999999884
No 323
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=39.28 E-value=18 Score=30.20 Aligned_cols=51 Identities=20% Similarity=0.253 Sum_probs=40.6
Q ss_pred CCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc
Q psy5413 182 DGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEH 237 (285)
Q Consensus 182 ~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~ 237 (285)
++.+|.+.+++.++...+. .+..|++...++. +...+.++-+++.+.+.+.
T Consensus 13 dg~iD~~~l~~lv~~li~~---Gv~gl~v~GttGE--~~~Ls~~Er~~v~~~~~~~ 63 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSK---GVDVVFVAGTTGL--GPALSLQEKMELTDAATSA 63 (286)
T ss_dssp TTEECHHHHHHHHHHHHHT---TCCEEEETSTTTT--GGGSCHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHC---CCCEEEECccccC--hhhCCHHHHHHHHHHHHHH
Confidence 6789999999887643221 5788999888888 6888999999999988875
No 324
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=39.26 E-value=21 Score=32.75 Aligned_cols=23 Identities=17% Similarity=0.229 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++|+-||+|-|
T Consensus 79 ~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 79 MEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 67899999999999999999999
No 325
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=39.24 E-value=21 Score=33.04 Aligned_cols=25 Identities=32% Similarity=0.456 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-|.-
T Consensus 222 ~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 222 KETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcC
Confidence 6889999999999999999999943
No 326
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=38.83 E-value=20 Score=32.89 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++|+-||+|-|
T Consensus 78 ~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 78 MDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 67899999999999999999999
No 327
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=38.81 E-value=21 Score=33.70 Aligned_cols=24 Identities=21% Similarity=0.209 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++||-||+|-+
T Consensus 110 t~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 110 TLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeC
Confidence 378899999999999999999998
No 328
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=38.38 E-value=25 Score=29.16 Aligned_cols=23 Identities=4% Similarity=0.132 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~De 245 (285)
+.+.++++++.|+++|+.+|+|-
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEe
Confidence 56789999999999999999994
No 329
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=38.20 E-value=79 Score=25.39 Aligned_cols=60 Identities=8% Similarity=0.186 Sum_probs=40.2
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhhhcccCCeE
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAEVCASVDTV 260 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~~~~~~dv~ 260 (285)
..+.+++..+. .+.+|++-...+ ...+.+.++.+.+++++++++. +.+. ......++|-+
T Consensus 20 ~~~~~~~~~~~-------GtD~i~vGGs~g------vt~~~~~~~v~~ik~~~~Pvvl-fp~~-~~~v~~gaD~~ 79 (228)
T 3vzx_A 20 PDEQLEILCES-------GTDAVIIGGSDG------VTEDNVLRMMSKVRRFLVPCVL-EVSA-IEAIVPGFDLY 79 (228)
T ss_dssp CTTHHHHHHTS-------SCSEEEECCCSC------CCHHHHHHHHHHHTTSSSCEEE-ECSC-GGGCCSCCSEE
T ss_pred CHHHHHHHHHc-------CCCEEEECCcCC------CCHHHHHHHHHHhhccCCCEEE-eCCC-HHHccccCCEE
Confidence 44566666554 678898854432 3467788999989889999998 5554 23334566644
No 330
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=38.16 E-value=22 Score=33.63 Aligned_cols=23 Identities=17% Similarity=0.141 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++||-||+|-+
T Consensus 107 ~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 107 WTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 67899999999999999999999
No 331
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=38.13 E-value=22 Score=33.62 Aligned_cols=23 Identities=30% Similarity=0.296 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++||-||+|-+
T Consensus 115 ~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 115 IADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeC
Confidence 68899999999999999999998
No 332
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=37.99 E-value=21 Score=32.64 Aligned_cols=24 Identities=21% Similarity=0.216 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++||-||+|-|
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 367899999999999999999999
No 333
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=37.83 E-value=22 Score=29.65 Aligned_cols=23 Identities=17% Similarity=0.111 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.+.|+++++.|+++|+.+|+|--
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H 101 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWH 101 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 46689999999999999999954
No 334
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=37.63 E-value=63 Score=22.05 Aligned_cols=46 Identities=13% Similarity=0.206 Sum_probs=32.3
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
.+...++|+.. +.++|++..-- ++....++..+|+.++++++.-..
T Consensus 24 ~~~v~kai~~g------ka~lViiA~D~--------~~~~~~~i~~~c~~~~vp~~~~~s 69 (101)
T 3v7q_A 24 EDLVIKEIRNA------RAKLVLLTEDA--------SSNTAKKVTDKCNYYKVPYKKVES 69 (101)
T ss_dssp HHHHHHHHHTT------CCSEEEEETTS--------CHHHHHHHHHHHHHTTCCEEEESC
T ss_pred hhhhHHHHhcC------ceeEEEEeccc--------cccchhhhcccccccCCCeeeech
Confidence 45677777662 66788885433 233488899999999999887543
No 335
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=37.62 E-value=23 Score=32.81 Aligned_cols=23 Identities=9% Similarity=-0.081 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++||-||+|-|
T Consensus 87 ~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 87 NEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 67899999999999999999999
No 336
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=37.21 E-value=53 Score=25.63 Aligned_cols=42 Identities=17% Similarity=0.195 Sum_probs=31.5
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
+.++|+++++. +...|++ .. |.+.. |+++.+.++++|-.+++
T Consensus 18 ~~~~l~~al~s-------~~~~ifl--l~----g~i~~---l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 18 NQKDMEKILEL-------DLTYMVM--LE----THVAQ---LKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSHHHHHHTTS-------SCCEEEE--CS----EETTT---HHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcC-------CCCEEEE--ec----CcHHH---HHHHHHHHHHcCCeEEE
Confidence 67899999976 4455555 12 67777 99999999999766555
No 337
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=37.12 E-value=24 Score=30.46 Aligned_cols=48 Identities=10% Similarity=0.183 Sum_probs=34.2
Q ss_pred CCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 184 TFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 184 ~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
+.|...+.++++. ....+-+++ |.+-+.+.++++.+.|+++|+++-+-
T Consensus 92 Hf~~~lal~a~e~-------G~dklRINP------GNig~~~~~~~vv~~ak~~~~piRIG 139 (366)
T 3noy_A 92 HFAPSYAFLSMEK-------GVHGIRINP------GNIGKEEIVREIVEEAKRRGVAVRIG 139 (366)
T ss_dssp CSCHHHHHHHHHT-------TCSEEEECH------HHHSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHHh-------CCCeEEECC------cccCchhHHHHHHHHHHHcCCCEEEe
Confidence 4466667777765 345566633 34445788999999999999999885
No 338
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=37.00 E-value=24 Score=33.51 Aligned_cols=58 Identities=10% Similarity=0.148 Sum_probs=38.5
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCCC--e-----------eeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCG--G-----------TVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~g--G-----------~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
|++.|.+.|.--.+. .+-+|.+.++.-..+ | ..-+.++++++++.||++||-||+|-+
T Consensus 263 dl~Gi~~kLdyLk~L---Gvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 263 DLAGIMKHIDHLEDL---GVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CHHHHHTTHHHHHHH---TCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHhHHHHHc---CCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 677776665432111 466777776442210 1 112468899999999999999999999
No 339
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=36.96 E-value=41 Score=30.85 Aligned_cols=49 Identities=18% Similarity=0.380 Sum_probs=35.5
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~De 245 (285)
++.++++++. .+.+|.+--.+... ... .+..+++.++|++||+.||+++
T Consensus 28 ~~~ve~al~~-------Gv~~vQlR~K~~~~-~~~--~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 28 YGQVEAGLQN-------GVTLVQIREKDADT-KFF--IEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHHT-------TCSEEEECCSSSCT-THH--HHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHHC-------CCCEEEEecCCCCH-HHH--HHHHHHHHHHHHhcCCEEEEeC
Confidence 5778888876 57788887665432 221 3457788999999999999965
No 340
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=36.75 E-value=24 Score=29.15 Aligned_cols=24 Identities=8% Similarity=0.178 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.+.++++++.|+++|+.+|+|--
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 567899999999999999999944
No 341
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=36.53 E-value=27 Score=28.85 Aligned_cols=22 Identities=14% Similarity=0.069 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHcCCeEEEeCc
Q psy5413 225 QWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~Dea 246 (285)
+.|+++++.|+++|+.+|+|--
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~h 100 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDFH 100 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcC
Confidence 5688999999999999999854
No 342
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=36.46 E-value=23 Score=33.46 Aligned_cols=23 Identities=30% Similarity=0.330 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++||-||+|-+
T Consensus 116 ~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 116 FTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEc
Confidence 67899999999999999999998
No 343
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=36.24 E-value=49 Score=26.47 Aligned_cols=28 Identities=11% Similarity=0.195 Sum_probs=22.9
Q ss_pred eeeCCHHHHHHHHHHHHHcC-CeEEEeCc
Q psy5413 219 GTVLPMQWLRELKARCQEHN-IPVHMDGA 246 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~g-i~li~Dea 246 (285)
|.+.+.+.++.+.+++++++ +++++|-+
T Consensus 77 G~l~~~~~~~~~~~~~~~~~~~~vv~Dp~ 105 (258)
T 1ub0_A 77 GALGDAAIVEAVAEAVRRFGVRPLVVDPV 105 (258)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCCSEEECCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCcEEECCe
Confidence 44556677899999999998 89999964
No 344
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=41.77 E-value=7.8 Score=26.20 Aligned_cols=20 Identities=15% Similarity=0.205 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCeEEEeCc
Q psy5413 227 LRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea 246 (285)
=.+|+++|+++|++++.|..
T Consensus 29 A~~I~e~A~e~~VPi~e~~~ 48 (87)
T 3b1s_B 29 AQKIVEIAENYSIPVVRKPE 48 (87)
Confidence 47889999999999999976
No 345
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=35.17 E-value=26 Score=30.07 Aligned_cols=24 Identities=8% Similarity=0.165 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
..+.++++++.|+++|+.+|+|--
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDlH 108 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEVH 108 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 467899999999999999999954
No 346
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=35.03 E-value=23 Score=32.73 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=38.9
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCC---Ce----------eeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYC---GG----------TVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~---gG----------~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
|++.+.+.|.--.+. .+-+|.+.++.... |- ..-+.++++++++.||++||-||+|-|.-
T Consensus 170 d~~gi~~~LdyLk~L---Gvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 242 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKL---GVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFN 242 (583)
T ss_dssp CHHHHHHTHHHHHHH---TCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred CHHHHHHhhHHHHHc---CCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 677776665321111 45677777643211 00 11146889999999999999999999943
No 347
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=34.80 E-value=22 Score=25.63 Aligned_cols=20 Identities=10% Similarity=0.300 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCeEEEeCc
Q psy5413 227 LRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea 246 (285)
=.+|+++|++||++++.|..
T Consensus 73 A~~I~~~A~e~~VPi~e~~~ 92 (123)
T 2jli_A 73 VQTVRKIAEEEGVPILQRIP 92 (123)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 57899999999999999965
No 348
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=34.60 E-value=94 Score=21.69 Aligned_cols=49 Identities=12% Similarity=0.302 Sum_probs=32.0
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
|-+++.+.|.+- -...++...+++ -...+.++++.+.+-+++.|+-+++
T Consensus 60 dkedfrenirei-werypqldvvvi--------vttddkewikdfieeakergvevfv 108 (162)
T 2l82_A 60 DKEDFRENIREI-WERYPQLDVVVI--------VTTDDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp SHHHHHHHHHHH-HHHCTTCCEEEE--------EECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHH-HHhCCCCcEEEE--------EecCcHHHHHHHHHHHHhcCcEEEE
Confidence 445555555331 111235556665 4556789999999999999987776
No 349
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=34.52 E-value=28 Score=32.72 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=38.1
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCC-----Ce-e------e----CCHHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYC-----GG-T------V----LPMQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~-----gG-~------~----~~~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
|++.|.+.+.--.+. .+-+|.+.++.-.. +| . + -+.++++++++.||++||-||+|-|.
T Consensus 104 dl~gi~~~LdyL~~L---Gv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V~ 178 (644)
T 3czg_A 104 TLQGVAERVPYLQEL---GVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVL 178 (644)
T ss_dssp SHHHHHHTHHHHHHH---TCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHc---CCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 566666665321111 45677777744311 11 1 1 13678999999999999999999993
No 350
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=34.28 E-value=31 Score=28.42 Aligned_cols=22 Identities=0% Similarity=-0.070 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHcCCeEEEeCc
Q psy5413 225 QWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~Dea 246 (285)
+.|+++++.|+++|+.+|+|--
T Consensus 77 ~~ld~~v~~a~~~Gi~vild~h 98 (291)
T 1egz_A 77 AKVERVVDAAIANDMYAIIGWH 98 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcC
Confidence 5688899999999999999853
No 351
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=34.27 E-value=28 Score=32.56 Aligned_cols=23 Identities=30% Similarity=0.231 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++||-||+|-|
T Consensus 162 ~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 162 IGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 57899999999999999999999
No 352
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=34.14 E-value=30 Score=29.69 Aligned_cols=23 Identities=22% Similarity=0.183 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.+.++++++.|+++|+.||+|--
T Consensus 120 l~~ld~~v~~a~~~Gi~Vild~H 142 (359)
T 4hty_A 120 LELLDQVVAWNNELGIYTILDWH 142 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcC
Confidence 45579999999999999999843
No 353
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=33.91 E-value=62 Score=22.29 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=32.4
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE-eCc
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM-DGA 246 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~-Dea 246 (285)
.++..++|+.. +.++|++..-. ++...+++..+|..++++++. ...
T Consensus 27 ~~~v~kai~~g------kaklVilA~D~--------~~~~~~~i~~~c~~~~ip~~~~~~s 73 (105)
T 3u5e_c 27 YKSTVKSLRQG------KSKLIIIAANT--------PVLRKSELEYYAMLSKTKVYYFQGG 73 (105)
T ss_dssp HHHHHHHHHTT------CCSEEEECTTS--------CHHHHHHHHHHHHHHTCEEEECSSC
T ss_pred HHHHHHHHHcC------CceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 45677777652 56788874422 455689999999999999983 444
No 354
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=33.62 E-value=28 Score=18.18 Aligned_cols=19 Identities=32% Similarity=0.410 Sum_probs=15.3
Q ss_pred CHHHHHHHHHHHHHcCCeE
Q psy5413 223 PMQWLRELKARCQEHNIPV 241 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~l 241 (285)
.+++|+++.+-+++.+|-+
T Consensus 13 tpeelkklkeeakkanirv 31 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRV 31 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHhccEEE
Confidence 4677999999999888754
No 355
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=33.52 E-value=28 Score=33.10 Aligned_cols=25 Identities=8% Similarity=0.085 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-|+-
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 4889999999999999999999944
No 356
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=33.49 E-value=68 Score=26.32 Aligned_cols=28 Identities=21% Similarity=0.380 Sum_probs=22.8
Q ss_pred eeeCCHHHHHHHHHHHHHcCCe-EEEeCc
Q psy5413 219 GTVLPMQWLRELKARCQEHNIP-VHMDGA 246 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~gi~-li~Dea 246 (285)
|.+.+.+.++.+.++++++++. +++|-+
T Consensus 101 G~l~~~~~~~~~~~~~~~~~~~~vvlDp~ 129 (288)
T 1jxh_A 101 GMLAETDIVEAVAERLQRHHVRNVVLDTV 129 (288)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCeEEEcCc
Confidence 4444778899999999999996 999954
No 357
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=33.46 E-value=28 Score=33.12 Aligned_cols=25 Identities=16% Similarity=0.161 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-|+-
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~N 339 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFN 339 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4889999999999999999999943
No 358
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=33.28 E-value=24 Score=25.98 Aligned_cols=20 Identities=20% Similarity=0.120 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCCeEEEeCc
Q psy5413 227 LRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea 246 (285)
=.+|+++|++||++++.|..
T Consensus 83 A~~I~e~A~e~gVPi~e~~~ 102 (137)
T 3bzs_A 83 ALQIIKLAELYDIPVIEDIP 102 (137)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 57899999999999999965
No 359
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=33.08 E-value=30 Score=29.71 Aligned_cols=23 Identities=22% Similarity=0.073 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 225 QWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~Dea~ 247 (285)
+.|+++++.|+++|+.+|+|--.
T Consensus 90 ~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 90 DLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 56899999999999999999654
No 360
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=32.10 E-value=32 Score=28.63 Aligned_cols=22 Identities=14% Similarity=0.126 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHcCCeEEEeCc
Q psy5413 225 QWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~Dea 246 (285)
+.|+++++.|+++|+.+|+|--
T Consensus 80 ~~ld~~v~~a~~~Gl~vild~h 101 (306)
T 2cks_A 80 DRMHQLIDMATARGLYVIVDWH 101 (306)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEec
Confidence 5689999999999999999953
No 361
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=31.86 E-value=31 Score=31.67 Aligned_cols=25 Identities=16% Similarity=0.154 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++|+-||+|-+.-
T Consensus 167 ~~d~~~lv~~~h~~Gi~VilD~V~N 191 (558)
T 3vgf_A 167 PEGFRKLVDEAHKKGLGVILDVVYN 191 (558)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeec
Confidence 5789999999999999999999843
No 362
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=31.74 E-value=32 Score=31.97 Aligned_cols=25 Identities=16% Similarity=0.034 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-+.-
T Consensus 192 ~~d~~~lv~~~H~~Gi~VilD~V~N 216 (602)
T 2bhu_A 192 PEDLMALVDAAHRLGLGVFLDVVYN 216 (602)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccc
Confidence 6889999999999999999999843
No 363
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=31.67 E-value=32 Score=32.37 Aligned_cols=25 Identities=16% Similarity=0.104 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-++-
T Consensus 241 ~~d~~~lv~~~H~~Gi~VilD~V~N 265 (657)
T 2wsk_A 241 LDEFRDAIKALHKAGIEVILDIVLN 265 (657)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeec
Confidence 5889999999999999999999843
No 364
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=31.49 E-value=92 Score=21.82 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=35.4
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEe-CccCChhhh
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMD-GARLPLAEV 253 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D-ea~~~~~~~ 253 (285)
.+...++|+.. +.++|++..- .++....+|..+|..++++++.- .....+...
T Consensus 31 ~~~t~kai~~g------kakLVilA~D--------~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A 84 (112)
T 3iz5_f 31 YKTVLKTLRSS------LGKLIILANN--------CPPLRKSEIETYAMLAKISVHHFHGNNVDLGTA 84 (112)
T ss_dssp HHHHHHHHHTT------CCSEEEECSC--------CCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHH
T ss_pred HHHHHHHHHcC------CceEEEEeCC--------CCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHH
Confidence 45666677652 6678888332 23455899999999999999965 444444433
No 365
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=31.34 E-value=35 Score=29.95 Aligned_cols=23 Identities=26% Similarity=0.380 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~De 245 (285)
..+.|+++++.|+++|+.||+|-
T Consensus 111 ~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 111 QVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 36789999999999999999994
No 366
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=31.26 E-value=27 Score=25.95 Aligned_cols=20 Identities=10% Similarity=0.300 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCCeEEEeCc
Q psy5413 227 LRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea 246 (285)
=.+|+++|++||++++.|..
T Consensus 82 A~~I~e~A~e~gVPi~e~~~ 101 (144)
T 2jlj_A 82 VQTVRKIAEEEGVPILQRIP 101 (144)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 57899999999999999965
No 367
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=31.25 E-value=89 Score=22.68 Aligned_cols=46 Identities=17% Similarity=0.335 Sum_probs=31.2
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~De 245 (285)
.+...++|+.. +.++|++..--. |.+.+..|..+|++++++++.-.
T Consensus 46 ~~~v~kal~~g------kaklViiA~D~~-------~~~~~~~l~~lc~~~~IP~~~v~ 91 (135)
T 2aif_A 46 ANEATKALNRG------IAEIVLLAADAE-------PLEILLHLPLVCEDKNTPYVFVR 91 (135)
T ss_dssp HHHHHHHHHTT------CEEEEEEETTCS-------CHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHcC------CCeEEEEecCCC-------hHHHHhHHHHHHHhcCCcEEEEC
Confidence 45666777652 677888755332 22335899999999999987543
No 368
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=31.12 E-value=33 Score=31.95 Aligned_cols=25 Identities=12% Similarity=-0.001 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-+.-
T Consensus 204 ~~~~~~lv~~~H~~Gi~VilD~V~N 228 (617)
T 1m7x_A 204 RDDFRYFIDAAHAAGLNVILDWVPG 228 (617)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecC
Confidence 6889999999999999999999844
No 369
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=31.01 E-value=1.1e+02 Score=25.86 Aligned_cols=51 Identities=12% Similarity=0.094 Sum_probs=34.0
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
++.+.++..++. ..+.|+++..-+ |.+. .+.++.|.+ +.+.|++|+ -..|.
T Consensus 229 ~~~~~l~~~~~~-------g~~GiVle~~G~---Gn~p-~~~~~~l~~-a~~~Gi~VV-~~Sr~ 279 (327)
T 1o7j_A 229 DPEYLYDAAIQH-------GVKGIVYAGMGA---GSVS-VRGIAGMRK-ALEKGVVVM-RSTRT 279 (327)
T ss_dssp CCTHHHHHHHHT-------TCSEEEEEEBTT---TBCC-HHHHHHHHH-HHHTTCEEE-EEESS
T ss_pred CCHHHHHHHHhC-------CCCEEEEeeECC---CCCC-HHHHHHHHH-HHHCCceEE-EECCC
Confidence 567778888766 678999988554 5654 566777777 456787754 33443
No 370
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=30.81 E-value=32 Score=28.95 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.+.++++.+.|+++|+.||+|-.
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~~ 111 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 67789999999999999999964
No 371
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=30.79 E-value=1.3e+02 Score=23.72 Aligned_cols=50 Identities=8% Similarity=0.177 Sum_probs=33.4
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC--------ChhhhcccCCeE
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL--------PLAEVCASVDTV 260 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~--------~~~~~~~~~dv~ 260 (285)
+..+|++.=.|. ++.+.++.+.+++. .|+.||+=+-.. +...+...+|.+
T Consensus 101 ~~dvViIDEaQF------~~~~~V~~l~~l~~-~~~~Vi~~Gl~~DF~~~~F~~~~~Ll~~AD~V 158 (214)
T 2j9r_A 101 EMDVIAIDEVQF------FDGDIVEVVQVLAN-RGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHV 158 (214)
T ss_dssp SCCEEEECCGGG------SCTTHHHHHHHHHH-TTCEEEEEECSBCTTSCBCTTHHHHHHHCSEE
T ss_pred CCCEEEEECccc------CCHHHHHHHHHHhh-CCCEEEEEecccccccCccccHHHHHHhcccE
Confidence 467888877664 55566766666555 499999876633 444556677766
No 372
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=30.73 E-value=75 Score=21.80 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=31.7
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE-eCc
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM-DGA 246 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~-Dea 246 (285)
.+...++|+.. +.++|++..-. ++....++..+|.+++++++. -..
T Consensus 27 ~~~v~kai~~g------kaklViiA~D~--------~~~~~~~i~~~c~~~~ip~~~~~~s 73 (104)
T 4a18_G 27 YKSTIKAIRNG------TAKLVFISNNC--------PTVRKSEIEYYASLAQISIHHFVGS 73 (104)
T ss_dssp HHHHHHHHHHT------CCCEEEECTTS--------CHHHHHHHHHHHHHHTCEEEECSSC
T ss_pred HHHHHHHHHcC------CceEEEEeCCC--------CHHHHHHHHHHHHHcCCcEEEecCC
Confidence 45677777652 56788875422 234578888999999999984 443
No 373
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=30.70 E-value=40 Score=29.21 Aligned_cols=25 Identities=20% Similarity=0.252 Sum_probs=22.7
Q ss_pred eeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 219 GTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
+-.++.+++++|.+.|+++||-||-
T Consensus 89 ~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 89 KPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp CEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 5689999999999999999998874
No 374
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=30.58 E-value=37 Score=29.85 Aligned_cols=24 Identities=13% Similarity=0.196 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
..+.|+++++.|+++|+.||+|--
T Consensus 112 ~l~~ld~vv~~a~~~Gi~VilDlH 135 (408)
T 1h4p_A 112 QESYLDQAIGWARNNSLKVWVDLH 135 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECC
Confidence 457799999999999999999954
No 375
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=30.54 E-value=38 Score=28.15 Aligned_cols=23 Identities=9% Similarity=-0.109 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 225 QWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~Dea~ 247 (285)
+.++++++.|+++|+.+|+|--+
T Consensus 72 ~~~~~~v~~~~~~gi~vild~h~ 94 (305)
T 1h1n_A 72 ADLIATVNAITQKGAYAVVDPHN 94 (305)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEEeccc
Confidence 56899999999999999999553
No 376
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=30.40 E-value=65 Score=27.54 Aligned_cols=60 Identities=15% Similarity=0.223 Sum_probs=39.7
Q ss_pred CCCHHHHHHHhcccccccCCceEEEEEecccCCCCee-----eCC-HHHHHHHHHHHHHcCCeEEEe
Q psy5413 184 TFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGT-----VLP-MQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 184 ~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~-----~~~-~~~l~~i~~la~~~gi~li~D 244 (285)
..++++|.+.++.....++ .+.+|+|.+.+...++. ... .+..+.|..+|+++|+++|+=
T Consensus 137 ~~si~~i~~~ir~l~~~~g-g~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~l 202 (338)
T 4a1f_A 137 YVRIEQIRLQLRKLKSQHK-ELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIAL 202 (338)
T ss_dssp TCCHHHHHHHHHHHHHHCT-TEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCcHHHHHHHHHHHHHhcC-CCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 3578888877754322221 58999999977654221 112 244678889999999999873
No 377
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=30.29 E-value=47 Score=23.71 Aligned_cols=15 Identities=27% Similarity=0.233 Sum_probs=13.6
Q ss_pred HHHHHHHHHcCCeEE
Q psy5413 228 RELKARCQEHNIPVH 242 (285)
Q Consensus 228 ~~i~~la~~~gi~li 242 (285)
+++.++|+++|+-++
T Consensus 95 ~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 95 EELEEILSENGIEPV 109 (122)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCeEE
Confidence 689999999999988
No 378
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=29.99 E-value=69 Score=26.16 Aligned_cols=54 Identities=13% Similarity=0.072 Sum_probs=41.1
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.+..+++.++.. ++-+..+=+.--+ -.++|.+.|++..+++|+||+.+..-+.
T Consensus 23 lg~~~~~d~Le~~----g~yID~lKfg~Gt----~~l~~~~~l~eki~l~~~~gV~v~~GGT 76 (251)
T 1qwg_A 23 LPPKFVEDYLKVC----GDYIDFVKFGWGT----SAVIDRDVVKEKINYYKDWGIKVYPGGT 76 (251)
T ss_dssp CCHHHHHHHHHHH----GGGCSEEEECTTG----GGGSCHHHHHHHHHHHHTTTCEEEECHH
T ss_pred CCHHHHHHHHHHh----hhhcceEEecCce----eeecCHHHHHHHHHHHHHcCCeEECCcH
Confidence 5777777777652 2245566664444 5889999999999999999999999885
No 379
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=29.91 E-value=1.2e+02 Score=22.69 Aligned_cols=48 Identities=17% Similarity=0.120 Sum_probs=33.9
Q ss_pred HHHHHHhcccccccCCceEEEEEecccCCCCeeeCC-HHHHHHHHHHHHHcCCeEEEeC
Q psy5413 188 DEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLP-MQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 188 ~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~-~~~l~~i~~la~~~gi~li~De 245 (285)
..+.+.|.+. ++.+|+..+. |- + ..+ ..+...|++.|..|+|+++.--
T Consensus 72 p~I~d~I~~g------eIdlVInt~~--pl-~-~~~h~~D~~~IrR~A~~~~IP~~T~l 120 (152)
T 1b93_A 72 QQVGALISEG------KIDVLIFFWD--PL-N-AVPHDPDVKALLRLATVWNIPVATNV 120 (152)
T ss_dssp HHHHHHHHTT------CCCEEEEECC--TT-S-CCTTHHHHHHHHHHHHHTTCCEESSH
T ss_pred chHHHHHHCC------CccEEEEcCC--cc-c-CCcccccHHHHHHHHHHcCCCEEeCH
Confidence 3577778663 7778877652 21 3 334 5669999999999999988653
No 380
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=29.83 E-value=1.2e+02 Score=25.74 Aligned_cols=51 Identities=16% Similarity=0.326 Sum_probs=33.7
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
++.+.++..++. ..+.|+++..-+ |.+. .+.++.|.+ +.+.|++|+ -..|.
T Consensus 230 ~~~~~l~~~~~~-------g~~GiVle~~G~---Gn~p-~~~~~~l~~-a~~~Gi~VV-~~Sr~ 280 (332)
T 2wlt_A 230 MTPDLFQASLNS-------HAKGVVIAGVGN---GNVS-AGFLKAMQE-ASQMGVVIV-RSSRV 280 (332)
T ss_dssp CCTHHHHHHHHT-------TCSEEEEEEBTT---TBCC-HHHHHHHHH-HHHTTCEEE-EEESS
T ss_pred CCHHHHHHHHhC-------CCCEEEEeeECC---CCCC-HHHHHHHHH-HHHCCCEEE-EECCC
Confidence 567778888866 678999987543 5654 566777777 456787754 33443
No 381
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=29.83 E-value=33 Score=32.67 Aligned_cols=25 Identities=12% Similarity=0.107 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-|+-
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV~N 290 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVVYN 290 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 5889999999999999999999843
No 382
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=29.65 E-value=38 Score=32.52 Aligned_cols=26 Identities=19% Similarity=0.143 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
+.++++++++.||++||-||+|-++-
T Consensus 249 t~~df~~lv~~~H~~Gi~VilD~V~N 274 (755)
T 3aml_A 249 TPEDLKYLVDKAHSLGLRVLMDVVHS 274 (755)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 46889999999999999999999944
No 383
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=29.61 E-value=38 Score=32.22 Aligned_cols=24 Identities=8% Similarity=0.116 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++++++++.||++|+-||+|-+.
T Consensus 320 ~edfk~LV~~aH~~GI~VilD~V~ 343 (695)
T 3zss_A 320 LDDFDHFVTEAGKLGLEIALDFAL 343 (695)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeec
Confidence 588999999999999999999883
No 384
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=29.55 E-value=73 Score=25.66 Aligned_cols=28 Identities=14% Similarity=0.226 Sum_probs=22.6
Q ss_pred eeeCCHHHHHHHHHHHHHcCC-eEEEeCc
Q psy5413 219 GTVLPMQWLRELKARCQEHNI-PVHMDGA 246 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~gi-~li~Dea 246 (285)
|.+.+.+.++.+.+++++++. ++++|-+
T Consensus 81 G~l~~~~~~~~~~~~~~~~~~~~vv~Dp~ 109 (271)
T 2i5b_A 81 GMLPTVDIIELAAKTIKEKQLKNVVIDPV 109 (271)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCSSEEECCC
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCEEEcCC
Confidence 445557789999999999999 6999954
No 385
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=29.43 E-value=36 Score=33.54 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-++-
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV~N 555 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVVYN 555 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCEEEEEEccc
Confidence 4889999999999999999999943
No 386
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=29.43 E-value=37 Score=31.69 Aligned_cols=26 Identities=8% Similarity=-0.014 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
+.++++++++.||++||-||+|-+.-
T Consensus 201 ~~~~~~~lv~~~H~~Gi~VilD~V~N 226 (618)
T 3m07_A 201 TPDDFKAFIDAAHGYGLSVVLDIVLN 226 (618)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEeecCc
Confidence 35789999999999999999999844
No 387
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=29.27 E-value=41 Score=28.77 Aligned_cols=25 Identities=12% Similarity=0.076 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.+.++++++.|+++|+.+|+|--+.
T Consensus 83 l~~ld~vV~~a~~~Gi~vIlDlH~~ 107 (340)
T 3qr3_A 83 ISKYDQLVQGCLSLGAYCIVDIHNY 107 (340)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECST
T ss_pred HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4678999999999999999996533
No 388
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=29.24 E-value=40 Score=28.38 Aligned_cols=21 Identities=24% Similarity=0.338 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEe
Q psy5413 224 MQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~D 244 (285)
.+.++++.++|+++|+.||+|
T Consensus 90 ~~~ld~~~~~a~~~Gi~vil~ 110 (353)
T 2c0h_A 90 ISDMRAYLHAAQRHNILIFFT 110 (353)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEE
Confidence 457899999999999999986
No 389
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=29.20 E-value=37 Score=31.72 Aligned_cols=25 Identities=16% Similarity=0.135 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-++-
T Consensus 181 ~~~~~~lv~~~H~~Gi~VilD~V~n 205 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDFIPR 205 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcC
Confidence 4789999999999999999999844
No 390
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=29.05 E-value=41 Score=28.33 Aligned_cols=24 Identities=13% Similarity=0.354 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.+.++++++.|+++|+.+|+|--+
T Consensus 68 ~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 68 LSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEecC
Confidence 466899999999999999999654
No 391
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=29.00 E-value=78 Score=22.00 Aligned_cols=56 Identities=4% Similarity=0.046 Sum_probs=36.5
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc-cCChhhhcccCCeEEEecc
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA-RLPLAEVCASVDTVMFCLS 265 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea-~~~~~~~~~~~dv~~~s~s 265 (285)
+.+.+++|.--..| +. -.+++.+.++++|+.+-+... ..........+|+++.+.+
T Consensus 6 ~mkIlL~C~aGmST-sl-----lv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQ 62 (108)
T 3nbm_A 6 ELKVLVLCAGSGTS-AQ-----LANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQ 62 (108)
T ss_dssp CEEEEEEESSSSHH-HH-----HHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGG
T ss_pred CceEEEECCCCCCH-HH-----HHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChH
Confidence 56777777643332 22 268888999999998777653 3344445567898876643
No 392
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=28.91 E-value=1.9e+02 Score=22.62 Aligned_cols=125 Identities=10% Similarity=0.048 Sum_probs=67.7
Q ss_pred HHHHHHHhcc-cCCCCccCChhHHHHHHHHHhHcCCC---cEEEcCChHHHHHHHHHHccccCCCeEE--ecCCcceeee
Q psy5413 82 EMKNYMFNCE-VGDDVYLEDPTCKELQEKAAKLAGKE---AAIFVPSGTMGNLIAIMTHCDRRDSEII--VGDCSHIMLW 155 (285)
Q Consensus 82 ~v~~a~~~~~-~~~~~y~~~~~~~~l~~~la~~~g~~---~~~~~~~Gs~a~~~al~~~~~~~g~~vi--~~~~~h~~~~ 155 (285)
.+++.+.-.. .+...|+.. ..+|.+.+.+.+|.+ ++++...|..+...+=..... .+-+++ +++...
T Consensus 44 ~iRkdls~~g~~G~~g~gY~--v~~L~~~~~~~lg~~~~~rV~IIGaG~~G~~la~~~~~~-~g~~iVg~~D~dp~---- 116 (211)
T 2dt5_A 44 QVRKDLSYFGSYGTRGVGYT--VPVLKRELRHILGLNRKWGLCIVGMGRLGSALADYPGFG-ESFELRGFFDVDPE---- 116 (211)
T ss_dssp HHHHHHHHTTCCCCTTTCEE--HHHHHHHHHHHHTTTSCEEEEEECCSHHHHHHHHCSCCC-SSEEEEEEEESCTT----
T ss_pred HeechHHHHHHhcCCceeEE--hHHHHHHHHHHhCcCCCCEEEEECccHHHHHHHHhHhhc-CCcEEEEEEeCCHH----
Confidence 5555554331 234455533 566777777777764 357777787766554432222 222222 121110
Q ss_pred cccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHH
Q psy5413 156 EQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQ 235 (285)
Q Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~ 235 (285)
..|..+..++.. ..+++++.+++ ++..|+++.|+.. -+++++.|.
T Consensus 117 -------------k~g~~i~gv~V~-----~~~dl~ell~~-------~ID~ViIA~Ps~~----------~~ei~~~l~ 161 (211)
T 2dt5_A 117 -------------KVGRPVRGGVIE-----HVDLLPQRVPG-------RIEIALLTVPREA----------AQKAADLLV 161 (211)
T ss_dssp -------------TTTCEETTEEEE-----EGGGHHHHSTT-------TCCEEEECSCHHH----------HHHHHHHHH
T ss_pred -------------HHhhhhcCCeee-----cHHhHHHHHHc-------CCCEEEEeCCchh----------HHHHHHHHH
Confidence 001111122221 13446667754 4567777666642 468999999
Q ss_pred HcCCeEEEeCccC
Q psy5413 236 EHNIPVHMDGARL 248 (285)
Q Consensus 236 ~~gi~li~Dea~~ 248 (285)
+.|+..|..+...
T Consensus 162 ~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 162 AAGIKGILNFAPV 174 (211)
T ss_dssp HHTCCEEEECSSS
T ss_pred HcCCCEEEECCcc
Confidence 9999999988755
No 393
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=28.36 E-value=1.3e+02 Score=25.03 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=36.2
Q ss_pred CCHHHHHHHhcccccccCCceE--EEEEecccCCCCeee-CC-----HHHHHHHHHHHHHcCCeEEE
Q psy5413 185 FDLDEMEAKFSTADNIHCASTS--LVCVENTHNYCGGTV-LP-----MQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~--~v~i~~~~n~~gG~~-~~-----~~~l~~i~~la~~~gi~li~ 243 (285)
.+++++.+.+......+ +++ +|++.+.+....... .. .+.+++|..+|+++|+.+++
T Consensus 162 ~~~~~i~~~i~~l~~~~--~~~~~lVVID~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~ 226 (315)
T 3bh0_A 162 QSVNYIWSKTRQTKRKN--PGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIA 226 (315)
T ss_dssp CBHHHHHHHHHHHHHTS--SSCCEEEEEECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHhc--CCCCeEEEEeCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 57888877765432222 456 999999776531111 11 13356788889999998877
No 394
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=28.30 E-value=69 Score=27.28 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=34.2
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
++.+.++..++. ..+.|+++..-+ |.+. .+.++.|.+++.+.|++|+ -..|.
T Consensus 227 ~~~~~l~~~~~~-------g~~GiVle~~G~---Gn~p-~~~~~~l~~a~~~~gi~VV-~~Sr~ 278 (331)
T 1agx_A 227 MMPDAYQAFAKA-------GVKAIIHAGTGN---GSMA-NYLVPEVRKLHDEQGLQIV-RSSRV 278 (331)
T ss_dssp CCTHHHHHHHTT-------TCSEEEEEEBTT---TBCC-TTHHHHHHHHHHTTCCEEE-EEESS
T ss_pred CCHHHHHHHHhC-------CCCEEEEeeECC---CCCC-HHHHHHHHHHHHcCCCEEE-EECCC
Confidence 467778888766 678999987443 5554 4567777775437787754 33443
No 395
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=28.22 E-value=81 Score=26.12 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=28.8
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+..+|+++.-. + ...+.+.+.++.+.++++|+.+++|-.
T Consensus 133 ~~~~v~~~g~~-~---~~~~~~~~~~~~~~a~~~g~~v~~D~~ 171 (320)
T 3ie7_A 133 KEDMVVIAGSP-P---PHYTLSDFKELLRTVKATGAFLGCDNS 171 (320)
T ss_dssp TTCEEEEESCC-C---TTCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCCEEEEeCCC-C---CCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 45677776532 1 123567799999999999999999976
No 396
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=28.20 E-value=41 Score=31.63 Aligned_cols=24 Identities=21% Similarity=0.195 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+.++++++++.||++||-||+|-|
T Consensus 159 t~~d~~~lv~~~h~~Gi~Vi~D~V 182 (655)
T 3ucq_A 159 TMDDLSALARALRGRGISLVLDLV 182 (655)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEee
Confidence 357899999999999999999998
No 397
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=27.96 E-value=1.3e+02 Score=25.61 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=33.6
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
++.+.++..++. ..+.|+++..-+ |.+. .+.++.|.+ +.+.|++|+ -..|.
T Consensus 227 ~~~~~l~~~~~~-------g~~GiVle~~G~---Gn~p-~~~~~~l~~-a~~~gi~VV-~~Sr~ 277 (330)
T 1wsa_A 227 DTDVLVNAALQA-------GAKGIIHAGMGN---GNPF-PLTQNALEK-AAKSGVVVA-RSSRV 277 (330)
T ss_dssp CCSHHHHHHHHT-------TCSEEEEEEBTT---TBCC-HHHHHHHHH-HHHTTCEEE-EEESS
T ss_pred CCHHHHHHHHhC-------CCCEEEEeeECC---CCCC-HHHHHHHHH-HHHCCCEEE-EECCC
Confidence 467778888866 678999987443 5654 566777777 456787754 33443
No 398
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=27.95 E-value=40 Score=32.29 Aligned_cols=25 Identities=16% Similarity=0.072 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-|+-
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~N 296 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYN 296 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecc
Confidence 6889999999999999999999944
No 399
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=27.85 E-value=44 Score=28.30 Aligned_cols=24 Identities=13% Similarity=0.232 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
..+.++++++.|+++|+.+|+|--
T Consensus 93 ~~~~ld~~v~~a~~~Gi~vild~h 116 (358)
T 1ece_A 93 SLQVMDKIVAYAGQIGLRIILDRH 116 (358)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEecC
Confidence 356789999999999999999854
No 400
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=27.42 E-value=38 Score=31.67 Aligned_cols=61 Identities=13% Similarity=0.095 Sum_probs=39.7
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCC--Ce-------ee----CCHHHHHHHHHHHHHcC--C--eEEEeCccC
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYC--GG-------TV----LPMQWLRELKARCQEHN--I--PVHMDGARL 248 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~--gG-------~~----~~~~~l~~i~~la~~~g--i--~li~Dea~~ 248 (285)
|++.|.+.|.--.+ .-.+-+|.+.++.... .| .+ -+.++++++++.||++| | -||+|-|.-
T Consensus 189 ~~~gi~~~LdyLk~--~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~N 266 (637)
T 1ji1_A 189 DLAGIDQKLGYIKK--TLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFN 266 (637)
T ss_dssp CHHHHHHTHHHHHT--TTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCS
T ss_pred CHHHHHHhHHHHHh--ccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECcc
Confidence 77777776643111 0156677777643211 01 11 13688999999999999 9 999999943
No 401
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=27.09 E-value=2.2e+02 Score=22.08 Aligned_cols=70 Identities=11% Similarity=-0.049 Sum_probs=37.2
Q ss_pred cHHHHHHHHhcccCCCCccCChhHHHHHHHHHhHcCCC---cEEEcCChHHHHHHHHHHccccCCCeEEecCCc
Q psy5413 80 TMEMKNYMFNCEVGDDVYLEDPTCKELQEKAAKLAGKE---AAIFVPSGTMGNLIAIMTHCDRRDSEIIVGDCS 150 (285)
Q Consensus 80 ~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~---~~~~~~~Gs~a~~~al~~~~~~~g~~vi~~~~~ 150 (285)
.+++++.+.+...........+...++-+.++...+.. .++=..+|+......+...+ .++.+|+..+..
T Consensus 18 ~~~~l~~~~~~a~~~~~p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~-~~~~~v~~vD~~ 90 (221)
T 3dr5_A 18 TDAAVARAREDAAEFGLPAPDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGL-ADNTTLTCIDPE 90 (221)
T ss_dssp CCHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHS-CTTSEEEEECSC
T ss_pred CCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhC-CCCCEEEEEECC
Confidence 34555555544332222233566667777777777765 66655555555444444333 345566655443
No 402
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=27.06 E-value=86 Score=26.60 Aligned_cols=46 Identities=11% Similarity=0.037 Sum_probs=31.8
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEE
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVH 242 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li 242 (285)
++.+.++..++. ..+.|+++..-+ |.+. .+.++.|.+ +.+.|++|+
T Consensus 223 ~~~~~l~~~~~~-------g~~GiVl~~~G~---Gn~p-~~~~~~l~~-a~~~gi~VV 268 (326)
T 1nns_A 223 ASDLPAKALVDA-------GYDGIVSAGVGN---GNLY-KSVFDTLAT-AAKTGTAVV 268 (326)
T ss_dssp CCSHHHHHHHHT-------TCSEEEEEEBTT---TBCC-HHHHHHHHH-HHHTTCEEE
T ss_pred CCHHHHHHHHhC-------CCCEEEEeeECC---CCCC-HHHHHHHHH-HHHCCCEEE
Confidence 467778888866 678999988554 5654 566777777 455787655
No 403
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=27.05 E-value=1.1e+02 Score=23.21 Aligned_cols=40 Identities=25% Similarity=0.233 Sum_probs=24.2
Q ss_pred ceEEEEEecccCCCCeee--C-C----HHHHHHHHHHHHHcCCeEEE
Q psy5413 204 STSLVCVENTHNYCGGTV--L-P----MQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~--~-~----~~~l~~i~~la~~~gi~li~ 243 (285)
++++|++..++....... . . .+.++.|.++++++|+.+++
T Consensus 105 ~~~lliiD~~~~~l~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~vi~ 151 (220)
T 2cvh_A 105 NFALVVVDSITAHYRAEENRSGLIAELSRQLQVLLWIARKHNIPVIV 151 (220)
T ss_dssp TEEEEEEECCCCCTTGGGGSSTTHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCEEEEcCcHHHhhhcCchHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 578999999886420110 0 0 12355578888888865553
No 404
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=26.97 E-value=45 Score=29.83 Aligned_cols=24 Identities=17% Similarity=0.274 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
..+.++++++.|+++|+.+|+|--
T Consensus 70 ~l~~ld~vv~~a~~~Gl~VIlDlH 93 (464)
T 1wky_A 70 DIQTVRNLISLAEDNNLVAVLEVH 93 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 567899999999999999999843
No 405
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=26.88 E-value=44 Score=32.52 Aligned_cols=26 Identities=15% Similarity=-0.054 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
+.++++++++.||++||-||+|-|.-
T Consensus 691 t~~df~~lv~~~H~~GI~VilD~V~N 716 (844)
T 3aie_A 691 TADDLVKAIKALHSKGIKVMADWVPD 716 (844)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 37889999999999999999999933
No 406
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=26.86 E-value=21 Score=25.65 Aligned_cols=50 Identities=22% Similarity=0.330 Sum_probs=35.3
Q ss_pred CCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 184 TFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 184 ~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
..|...|.++... ..-.|. +| |. .+.+.++.|.+..+..++.++.|.=+.
T Consensus 13 k~D~~~L~~~~~~-------~~~iI~----t~---Gs-i~~~~l~~I~~~~~~r~VIi~TD~D~~ 62 (119)
T 2fcj_A 13 RSDKQKVAAVLNE-------PVVIVC----TN---GT-ISDARLEELADELEGYDVYLLADADEA 62 (119)
T ss_dssp HHHHHHHHHHBSS-------CCEEEE----CC---SC-CCHHHHHHHHHHTTTSEEEEECCSSHH
T ss_pred hHHHHHHHHhcCC-------CCCEEE----eC---Cc-cCHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 3477788777532 112222 12 67 788889999999989999999997755
No 407
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=26.79 E-value=43 Score=28.75 Aligned_cols=24 Identities=4% Similarity=0.050 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.+.++++++.|+++|+.+|+|--+
T Consensus 90 l~~ld~vVd~a~~~Gi~vIldlH~ 113 (353)
T 3l55_A 90 MMRVKAIVEYAMNAGLYAIVNVHH 113 (353)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC
Confidence 466899999999999999999554
No 408
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=26.73 E-value=97 Score=22.58 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=32.3
Q ss_pred HHHHHhcccccccCCceEEEEEec-ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 189 EMEAKFSTADNIHCASTSLVCVEN-THNYCGGTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 189 ~l~~~i~~~~~~~~~~~~~v~i~~-~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
.+.+.|.+. ++.+|+..+ |.+.. ....| ...|++.|..|+|+++.-
T Consensus 65 ~I~d~I~~g------eIdlVInt~~pl~~~-~h~~D---~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 65 QMGARVAEG------RILAVIFFRDPLTAQ-PHEPD---VQALLRVCDVHGVPLATN 111 (134)
T ss_dssp HHHHHHHTT------CEEEEEEECCTTTCC-TTSCC---SHHHHHHHHHHTCCEECS
T ss_pred hHHHHHHCC------CccEEEEccCcccCC-Cccch---HHHHHHHHHHcCCCeEcC
Confidence 577778663 788888766 33321 11344 899999999999998864
No 409
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=26.70 E-value=45 Score=31.82 Aligned_cols=26 Identities=19% Similarity=0.084 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
+.++++++++.||++||-||+|-+.-
T Consensus 311 t~~dfk~lV~~~H~~GI~VilD~V~N 336 (722)
T 3k1d_A 311 TPDDFRALVDALHQAGIGVIVDWVPA 336 (722)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEEee
Confidence 46889999999999999999999844
No 410
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=26.61 E-value=49 Score=27.62 Aligned_cols=24 Identities=4% Similarity=0.183 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.+.++++++.|+++|+.+|+|--+
T Consensus 81 ~~~~d~~v~~a~~~Gi~vildlh~ 104 (320)
T 3nco_A 81 LDRVKHVVDVALKNDLVVIINCHH 104 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCC
Confidence 577899999999999999999654
No 411
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=32.56 E-value=14 Score=26.38 Aligned_cols=20 Identities=15% Similarity=0.219 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCCeEEEeCc
Q psy5413 227 LRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 227 l~~i~~la~~~gi~li~Dea 246 (285)
=.+|+++|+++||+++.|..
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (114)
T 3b0z_B 29 ALRIREIGAEHRVPTLEAPP 48 (114)
Confidence 47889999999999999976
No 412
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=26.45 E-value=81 Score=26.80 Aligned_cols=26 Identities=12% Similarity=0.124 Sum_probs=22.5
Q ss_pred eeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 219 GTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
-..++.+.++++.+.|+++|+.+.+-
T Consensus 201 ~~~~~~e~l~~~~~~A~~~g~~v~~H 226 (403)
T 3gnh_A 201 QQQLTYEEMKAVVDEAHMAGIKVAAH 226 (403)
T ss_dssp CBCSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 45688999999999999999988765
No 413
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=26.28 E-value=1.4e+02 Score=24.89 Aligned_cols=54 Identities=9% Similarity=0.058 Sum_probs=37.6
Q ss_pred eEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC--------ChhhhcccCCeEEEe
Q psy5413 205 TSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL--------PLAEVCASVDTVMFC 263 (285)
Q Consensus 205 ~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~--------~~~~~~~~~dv~~~s 263 (285)
...++++.-+. . .+.+.+.++++.|+++|+.+++|-... .+..+..++|+++.+
T Consensus 163 ~~~~~~~g~~~---~--~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N 224 (347)
T 3otx_A 163 SRIFYFSGFTL---T--VDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVAN 224 (347)
T ss_dssp CSEEEEEGGGG---G--TCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEE
T ss_pred CCEEEEeeeec---c--cCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecC
Confidence 46888876442 1 456789999999999999999996511 233455677877544
No 414
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=26.19 E-value=43 Score=28.54 Aligned_cols=25 Identities=12% Similarity=0.165 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.+.++++++.|+++|+.+|+|--+.
T Consensus 82 l~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 82 MKRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp HHHHHHHHHHHHTTTCEEEECCCSC
T ss_pred HHHHHHHHHHHHHCCCEEEEecCCc
Confidence 4779999999999999999995533
No 415
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=26.06 E-value=61 Score=27.39 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=24.7
Q ss_pred EEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 207 LVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 207 ~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
-+++||-- ..++ ++++..+|++.||++++|--
T Consensus 191 RL~lENDd-----k~~s---v~dlL~i~~~~gIPiVfD~h 222 (310)
T 3tc3_A 191 RLVIENDD-----KVFS---VKDCLWISERTGIPVIFDNL 222 (310)
T ss_dssp TEEEECCS-----SSCC---HHHHHHHHHHHCCCEEEEHH
T ss_pred EEEEecCC-----ceec---HHHHHHHHhhcCCCeEeeHh
Confidence 45677532 4577 88888999999999999944
No 416
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=25.93 E-value=46 Score=31.74 Aligned_cols=23 Identities=13% Similarity=0.049 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.++++++++.||++|+-||+|-+
T Consensus 65 ~edfk~LV~aaH~~GIkVIlDvV 87 (720)
T 1iv8_A 65 EKEYRRLIETAHTIGLGIIQDIV 87 (720)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 67899999999999999999988
No 417
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=25.90 E-value=98 Score=21.90 Aligned_cols=47 Identities=13% Similarity=0.272 Sum_probs=31.8
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
..+...+|+.. +.++|++..-..| .+....|..+|++++|+++.-..
T Consensus 25 ~~~v~kai~~g------kakLViiA~D~~~-------~~~~~~l~~lc~~~~VP~~~v~s 71 (121)
T 2lbw_A 25 VKEVVKALRKG------EKGLVVIAGDIWP-------ADVISHIPVLCEDHSVPYIFIPS 71 (121)
T ss_dssp HHHHHHHHHHS------CCCEEEECTTCSC-------TTHHHHHHHHHHHTCCCEEECCC
T ss_pred HHHHHHHHHcC------CceEEEEeCCCCH-------HHHHHHHHHHHHhcCCcEEEECC
Confidence 45666677652 6678888553322 23477888999999999876554
No 418
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=25.84 E-value=51 Score=27.30 Aligned_cols=24 Identities=8% Similarity=0.149 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.+.++++++.|+++|+.+|+|--+
T Consensus 73 ~~~~d~~v~~a~~~Gi~vild~h~ 96 (317)
T 3aof_A 73 FKRVDEVINGALKRGLAVVINIHH 96 (317)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecC
Confidence 466899999999999999999653
No 419
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=25.66 E-value=80 Score=25.80 Aligned_cols=51 Identities=10% Similarity=0.083 Sum_probs=33.9
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~De 245 (285)
.+++|++.+++. ..++|-+.... . +.-.+.+.+..+.++|.++|++|++-.
T Consensus 105 ~~~el~~~~~~~------g~~gi~~~~~~--~-~~~~~~~~~~~~~~~a~~~~lpv~iH~ 155 (307)
T 2f6k_A 105 AVKTVQQALDQD------GALGVTVPTNS--R-GLYFGSPVLERVYQELDARQAIVALHP 155 (307)
T ss_dssp HHHHHHHHHHTS------CCSEEEEESEE--T-TEETTCGGGHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHhcc------CCcEEEEeccC--C-CCCCCcHhHHHHHHHHHHcCCeEEECC
Confidence 356777777531 55666554322 1 344455679999999999999998753
No 420
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=25.63 E-value=47 Score=28.60 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.+.++++++.|+++|+.+|+|--+.
T Consensus 100 l~~l~~~v~~a~~~Gi~vild~H~~ 124 (380)
T 1edg_A 100 MNRVQEVVNYCIDNKMYVILNTHHD 124 (380)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHHHHHHHHHCCCEEEEeCCCc
Confidence 3668999999999999999996543
No 421
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=25.50 E-value=85 Score=26.25 Aligned_cols=50 Identities=14% Similarity=0.177 Sum_probs=34.1
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~De 245 (285)
..++|++.++. ..+.|-+.... . |.-++.+.+..+.++|.++|++|++-.
T Consensus 129 a~~el~~~~~~-------g~~Gv~l~~~~--~-~~~l~d~~~~p~~~~~~e~~lpv~iH~ 178 (334)
T 2hbv_A 129 ACKEASRAVAA-------GHLGIQIGNHL--G-DKDLDDATLEAFLTHCANEDIPILVHP 178 (334)
T ss_dssp HHHHHHHHHHH-------TCCCEEEESCB--T-TBCTTSHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHc-------CCeEEEECCCC--C-CCCCCcHHHHHHHHHHHHCCCEEEECC
Confidence 35677777743 45666554321 1 444556779999999999999998854
No 422
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=25.46 E-value=50 Score=29.58 Aligned_cols=21 Identities=14% Similarity=0.128 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHcCCeEEEeC
Q psy5413 225 QWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~De 245 (285)
+.++++++.|+++|+.+|+|-
T Consensus 105 ~~l~~~v~~a~~~Gi~vildl 125 (481)
T 2osx_A 105 DRVEDRVGWYAERGYKVMLDM 125 (481)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 445668899999999999993
No 423
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=25.43 E-value=49 Score=31.21 Aligned_cols=59 Identities=14% Similarity=0.167 Sum_probs=39.1
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCC--e-----------eeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCG--G-----------TVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~g--G-----------~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
=|+..+.+.|....+ -.+.+|.+.++..... | ..-+.++++++++.||++|+-||+|-+
T Consensus 57 G~~~g~~~~l~yl~~---lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V 128 (669)
T 3k8k_A 57 GDLNGVTQKLDYLNQ---LGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDYV 128 (669)
T ss_dssp CCHHHHHTTHHHHHT---TTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHHHHHHHH---cCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 367777666543211 1466777776543210 1 112468899999999999999999998
No 424
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=25.26 E-value=44 Score=33.33 Aligned_cols=25 Identities=8% Similarity=0.085 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.++++++++.||++||-||+|-|+-
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~N 585 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYN 585 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCEEEEEEecc
Confidence 4889999999999999999999944
No 425
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=25.08 E-value=1e+02 Score=26.35 Aligned_cols=47 Identities=17% Similarity=0.097 Sum_probs=33.5
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
++.+.++.+++. ..+.|+++..-+ |.+. .+.++.|.++ .+.|++|+.
T Consensus 233 ~~~~~l~a~~~~-------g~~GiVle~~G~---Gn~p-~~~~~~l~~a-~~~Gi~VV~ 279 (334)
T 3nxk_A 233 GSGVAAKALFEH-------GTKGIVVAGSGA---GSIH-KNQKDVLKEL-LKKGLKVVV 279 (334)
T ss_dssp CHHHHHHHHHHT-------TCCEEEEEEBTT---TBCC-HHHHHHHHHH-HTTTCEEEE
T ss_pred CCHHHHHHHHhC-------CCCEEEEeeECC---CCCc-HHHHHHHHHH-HHCCCEEEE
Confidence 577788888876 688999988554 6654 5667777774 467887664
No 426
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=24.98 E-value=51 Score=32.96 Aligned_cols=25 Identities=20% Similarity=0.048 Sum_probs=22.7
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
+.++++++++.||++||-||+|-|.
T Consensus 911 t~edfk~LV~alH~~GI~VIlDvV~ 935 (1108)
T 3ttq_A 911 TDGDLRATIQALHHANMQVMADVVD 935 (1108)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4578999999999999999999993
No 427
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=24.96 E-value=49 Score=28.46 Aligned_cols=24 Identities=8% Similarity=0.026 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.+.++++++.|+++|+.+|+|--+
T Consensus 102 l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 102 LKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC
Confidence 467899999999999999999543
No 428
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=24.72 E-value=50 Score=27.82 Aligned_cols=24 Identities=4% Similarity=-0.049 Sum_probs=20.6
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea 246 (285)
..+.|+++++.|+++|+.+|+|--
T Consensus 75 ~~~~ld~~v~~a~~~Gi~vildlh 98 (341)
T 1vjz_A 75 FFEKIDRVIFWGEKYGIHICISLH 98 (341)
T ss_dssp GHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEEec
Confidence 356789999999999999999854
No 429
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=24.61 E-value=1.9e+02 Score=23.76 Aligned_cols=77 Identities=14% Similarity=0.029 Sum_probs=41.1
Q ss_pred CCCeEEecCCcceeeecccccccccccccccceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCe
Q psy5413 140 RDSEIIVGDCSHIMLWEQGGASQTSVYSQIGRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGG 219 (285)
Q Consensus 140 ~g~~vi~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG 219 (285)
+++.+++..+.+.+.. +.+|.+.+.+.. ....+.+.+|.+.++.-+ ..++++|++++-.++.
T Consensus 189 ~~~~~v~~H~af~Yf~------------~~yGl~~~~~~~-~~~eps~~~l~~l~~~ik---~~~v~~If~e~~~~~~-- 250 (291)
T 1pq4_A 189 PQRKFIVFHPSWAYFA------------RDYNLVQIPIEV-EGQEPSAQELKQLIDTAK---ENNLTMVFGETQFSTK-- 250 (291)
T ss_dssp SCCEEEESSCCCHHHH------------HHTTCEEEESCB-TTBCCCHHHHHHHHHHHH---TTTCCEEEEETTSCCH--
T ss_pred CCCEEEEECCchHHHH------------HHCCCEEeeccc-CCCCCCHHHHHHHHHHHH---HcCCCEEEEeCCCChH--
Confidence 4566776655544332 345666555433 223345555555543211 1178999998766541
Q ss_pred eeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 220 TVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 220 ~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
+ .+ .++++.|+.++.
T Consensus 251 -~-----~~---~ia~~~g~~v~~ 265 (291)
T 1pq4_A 251 -S-----SE---AIAAEIGAGVEL 265 (291)
T ss_dssp -H-----HH---HHHHHHTCEEEE
T ss_pred -H-----HH---HHHHHcCCeEEE
Confidence 1 22 346788877653
No 430
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=24.48 E-value=49 Score=29.98 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 225 QWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~Dea~ 247 (285)
+.++++++.|+++|+.+|+|--+
T Consensus 86 ~~~d~vv~~a~~~Gi~vildlH~ 108 (515)
T 3icg_A 86 KRVEEIANYAFDNDMYVIINLHH 108 (515)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHHHCCCEEEEecCC
Confidence 67999999999999999999653
No 431
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=24.38 E-value=1.1e+02 Score=26.20 Aligned_cols=26 Identities=15% Similarity=0.110 Sum_probs=21.9
Q ss_pred eeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 219 GTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
-..++.+.++++.+.|+++|+.+.+=
T Consensus 206 ~~~~~~e~l~~~~~~A~~~g~~v~~H 231 (423)
T 3feq_A 206 NTQYSEDEIRAIVDEAEAANTYVMAH 231 (423)
T ss_dssp SBCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cccCCHHHHHHHHHHHHHCCCeEEEE
Confidence 34688999999999999999887653
No 432
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=24.38 E-value=51 Score=27.72 Aligned_cols=21 Identities=10% Similarity=0.379 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHcCCeEEEeC
Q psy5413 225 QWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 225 ~~l~~i~~la~~~gi~li~De 245 (285)
+++.++.+.|+++|++++++-
T Consensus 142 ~~i~~v~~~~~~~G~p~lv~~ 162 (304)
T 1to3_A 142 NMVKEFNELCHSNGLLSIIEP 162 (304)
T ss_dssp HHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEE
Confidence 668999999999999999984
No 433
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=24.37 E-value=1.3e+02 Score=25.06 Aligned_cols=25 Identities=8% Similarity=-0.053 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 223 PMQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 223 ~~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
+.+.+.++.+.++++|+.+++|-..
T Consensus 165 ~~~~~~~~~~~a~~~g~~v~~Dp~~ 189 (331)
T 2fv7_A 165 TPATSLEALTMARRSGVKTLFNPAP 189 (331)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCEEEEeCCc
Confidence 4567889999999999999999763
No 434
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=24.34 E-value=56 Score=27.87 Aligned_cols=22 Identities=18% Similarity=0.087 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEeC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~De 245 (285)
.+.|.++++.|+++|+.+|+|-
T Consensus 84 ~~~ld~~i~~a~~~Gi~vil~l 105 (373)
T 1rh9_A 84 FQGLDFVISEAKKYGIHLIMSL 105 (373)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 4668899999999999999983
No 435
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=24.33 E-value=1.1e+02 Score=25.10 Aligned_cols=37 Identities=14% Similarity=0.269 Sum_probs=26.5
Q ss_pred EEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 206 SLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 206 ~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
..++++.... .-.+.+.+.++.+.++++|+.+++|-.
T Consensus 132 ~~~~~~g~~~----~~~~~~~~~~~~~~a~~~~~~v~~D~~ 168 (309)
T 3umo_A 132 AILVISGSLP----PGVKLEKLTQLISAAQKQGIRCIVDSS 168 (309)
T ss_dssp CEEEEESCCC----TTCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEEccCC----CCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 4666654221 113567799999999999999999975
No 436
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=24.26 E-value=1.4e+02 Score=26.06 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=25.9
Q ss_pred ceEEEEEecccCCCCeeeCC------------HHHHHHHHHHHHHcCCeEEE
Q psy5413 204 STSLVCVENTHNYCGGTVLP------------MQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~------------~~~l~~i~~la~~~gi~li~ 243 (285)
++++|++..++..- -.-++ .+.+..|.++++++|+.+|+
T Consensus 273 ~~~llVIDs~t~~~-~~~~sg~g~l~~Rq~~l~~il~~L~~lake~gitVIl 323 (400)
T 3lda_A 273 RFSLIVVDSVMALY-RTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVV 323 (400)
T ss_dssp CEEEEEEETGGGGC-C------CCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred CCceEEecchhhhC-chhhcCccchHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 68999999987542 11111 34567788899999887654
No 437
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=24.19 E-value=1.2e+02 Score=24.94 Aligned_cols=39 Identities=13% Similarity=0.224 Sum_probs=27.2
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+..+++++..... -.+.+.+.++.+.++++|+.+++|-.
T Consensus 125 ~~~~v~~~g~~~~----~~~~~~~~~~~~~a~~~g~~v~~D~~ 163 (306)
T 2abq_A 125 KGDVLVLAGSVPQ----AMPQTIYRSMTQIAKERGAFVAVDTS 163 (306)
T ss_dssp TTCEEEEESCCCT----TSCTTHHHHHHHHHHTTTCEEEEECC
T ss_pred CCCEEEEecCCCC----CCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 3467776543211 13446688999999999999999965
No 438
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=24.02 E-value=1.2e+02 Score=24.14 Aligned_cols=50 Identities=10% Similarity=0.229 Sum_probs=34.7
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC--------ChhhhcccCCeE
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL--------PLAEVCASVDTV 260 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~--------~~~~~~~~~dv~ 260 (285)
+..+|+|.-.|. ++.+.++.+.+++ ..|+.||+=+-.. +...+...+|.+
T Consensus 101 ~~dvV~IDEaQF------f~~~~v~~l~~la-~~gi~Vi~~GLd~DF~~~~F~~~~~Ll~~Ad~v 158 (219)
T 3e2i_A 101 NVDVIGIDEVQF------FDDEIVSIVEKLS-ADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQV 158 (219)
T ss_dssp TCSEEEECCGGG------SCTHHHHHHHHHH-HTTCEEEEEEESBCTTSCBCTTHHHHHHHCSEE
T ss_pred CCCEEEEechhc------CCHHHHHHHHHHH-HCCCEEEEeecccccccCCCccHHHHHHhcceE
Confidence 567888876654 5556788888888 5899999977644 344455566654
No 439
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=23.87 E-value=56 Score=32.61 Aligned_cols=24 Identities=13% Similarity=-0.008 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++++++++.||++||-||+|-|.
T Consensus 745 ~~efk~lV~alH~~GI~VIlDvV~ 768 (1039)
T 3klk_A 745 DEDLRNALQALHKAGLQAIADWVP 768 (1039)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 578999999999999999999993
No 440
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=23.65 E-value=51 Score=29.65 Aligned_cols=22 Identities=9% Similarity=0.125 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEeC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~De 245 (285)
.+.|+++++.|+++|+.+|+|-
T Consensus 79 l~~ld~vv~~a~~~Gl~VIlD~ 100 (491)
T 2y8k_A 79 VNEIDKIVERTRELGLYLVITI 100 (491)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEC
Confidence 5789999999999999999993
No 441
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=23.55 E-value=1.1e+02 Score=26.73 Aligned_cols=39 Identities=21% Similarity=0.163 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHHHHcCCeEEEeCccC-ChhhhcccCCeE
Q psy5413 222 LPMQWLRELKARCQEHNIPVHMDGARL-PLAEVCASVDTV 260 (285)
Q Consensus 222 ~~~~~l~~i~~la~~~gi~li~Dea~~-~~~~~~~~~dv~ 260 (285)
.+.+.++.+.++|++.|++++.|--.. .+..+.+.+|++
T Consensus 190 l~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~l 229 (385)
T 3nvt_A 190 LGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVI 229 (385)
T ss_dssp CTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhhCCEE
Confidence 457889999999999999999985533 233333334444
No 442
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=23.54 E-value=1.3e+02 Score=21.86 Aligned_cols=47 Identities=13% Similarity=0.279 Sum_probs=31.3
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
..+..++|+.. +.++|++..--.+ .+....|..+|+++|++++.-..
T Consensus 37 ~~~v~kai~~g------kakLViiA~D~~p-------~~~~~~l~~lc~~~~VP~~~v~s 83 (134)
T 2ale_A 37 ANEATKTLNRG------ISEFIIMAADCEP-------IEILLHLPLLCEDKNVPYVFVPS 83 (134)
T ss_dssp HHHHHHHHHHT------CEEEEEEETTCSS-------GGGGTHHHHHHHHHTCCEEEESC
T ss_pred chHHHHHHHhC------CCeEEEEeCCCCH-------HHHHHHHHHHHHhcCCCEEEECC
Confidence 45566666652 6788888653332 23367788999999999776544
No 443
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=23.49 E-value=1.2e+02 Score=21.78 Aligned_cols=46 Identities=20% Similarity=0.331 Sum_probs=30.7
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~De 245 (285)
..+...+|+.. +.++|++..--. |.+....|-.+|++++++++.=.
T Consensus 29 ~~~v~Kai~~g------ka~LViiA~D~~-------p~~~~~~i~~lc~~~~Ip~~~v~ 74 (126)
T 2xzm_U 29 LHEVLRTIEAK------QALFVCVAEDCD-------QGNYVKLVKALCAKNEIKYVSVP 74 (126)
T ss_dssp HHHHHHHHHHT------CCSEEEEESSCC-------STTHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHcC------CceEEEEeCCCC-------hHHHHHHHHHHHHHhCCCEEEEC
Confidence 44566666552 567888754332 23446889999999999998543
No 444
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=23.43 E-value=94 Score=24.91 Aligned_cols=58 Identities=9% Similarity=0.100 Sum_probs=29.7
Q ss_pred cceeeeeeecCCCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 170 GRVLMRGVTNQKDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 170 ~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
.|..+.......+.....+.++.++.. ++.+|++.+..... +.++.+.+++.|+++++
T Consensus 37 ~g~~~~~~~~~~~~~~~~~~~~~l~~~-------~vdgiI~~~~~~~~---------~~~~~~~~~~~~iPvV~ 94 (293)
T 3l6u_A 37 NKYEALVATSQNSRISEREQILEFVHL-------KVDAIFITTLDDVY---------IGSAIEEAKKAGIPVFA 94 (293)
T ss_dssp TTCEEEEEECSSCHHHHHHHHHHHHHT-------TCSEEEEECSCTTT---------THHHHHHHHHTTCCEEE
T ss_pred cCCEEEEECCCCCHHHHHHHHHHHHHc-------CCCEEEEecCChHH---------HHHHHHHHHHcCCCEEE
Confidence 355555444321111122344555554 67777776544321 44555556677887765
No 445
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=23.21 E-value=1.2e+02 Score=27.81 Aligned_cols=51 Identities=14% Similarity=0.176 Sum_probs=36.7
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.+.+++++.... ...++++.. |...+.+.+..+.+.++++++++++|-+-.
T Consensus 294 ~~~~E~~e~~~~-------~~~alvin~------G~l~~~~~~~~a~~~a~~~~~PvVlDPVg~ 344 (540)
T 3nl6_A 294 EIQSEVNDLAAI-------PHATLLLNT------GSVAPPEMLKAAIRAYNDVKRPIVFDPVGY 344 (540)
T ss_dssp CCHHHHHHHTTS-------TTCEEEEES------SCSCCHHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCHHHHHHHHhc-------cCCeEEEeC------CCCCHHHHHHHHHHHHHHcCCCEEEChHHh
Confidence 467888887753 135666644 344447778888888999999999998844
No 446
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=23.14 E-value=2.5e+02 Score=21.40 Aligned_cols=50 Identities=14% Similarity=0.256 Sum_probs=33.1
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC--------ChhhhcccCCeE
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL--------PLAEVCASVDTV 260 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~--------~~~~~~~~~dv~ 260 (285)
+..+|+++-.+. ++++.++.+.+++.+ |+.||+=+-.. +...+...+|.+
T Consensus 81 ~~dvViIDEaqf------l~~~~v~~l~~l~~~-~~~Vi~~Gl~~df~~~~F~~~~~L~~~AD~V 138 (191)
T 1xx6_A 81 DTEVIAIDEVQF------FDDEIVEIVNKIAES-GRRVICAGLDMDFRGKPFGPIPELMAIAEFV 138 (191)
T ss_dssp TCSEEEECSGGG------SCTHHHHHHHHHHHT-TCEEEEEECSBCTTSCBCTTHHHHHHHCSEE
T ss_pred cCCEEEEECCCC------CCHHHHHHHHHHHhC-CCEEEEEecccccccCcCccHHHHHHHcccE
Confidence 457888875553 555667777777665 99999854422 344555677866
No 447
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=22.86 E-value=1.1e+02 Score=27.67 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=31.3
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
-++.++++++. .+++|+++ . |. +.+..+++.++|+++|+.++==.+
T Consensus 49 v~~~v~e~~~~-------Gv~~viis--~----Gf--~~~~~~~l~~~A~~~g~rliGPNc 94 (480)
T 3dmy_A 49 AAELANQALDR-------NLNVMMFS--D----NV--TLEDEIQLKTRAREKGLLVMGPDC 94 (480)
T ss_dssp HHHHHHHHHHT-------TCEEEECC--C----CC--CHHHHHHHHHHHHHTTCCEECSSC
T ss_pred HHHHHHHHHhc-------CCCEEEEC--C----CC--CHHHHHHHHHHHHHcCCEEEecCc
Confidence 45677888776 56755442 1 33 256678999999999998874444
No 448
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=22.82 E-value=57 Score=31.94 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++++++++.||++||-||+|-|+
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~ 392 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVY 392 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHcCCEEEEEEee
Confidence 488999999999999999999994
No 449
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=22.69 E-value=1.5e+02 Score=22.76 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=33.5
Q ss_pred HHHHHHhcccccccCCceEEEEEec-ccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 188 DEMEAKFSTADNIHCASTSLVCVEN-THNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 188 ~~l~~~i~~~~~~~~~~~~~v~i~~-~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
..+.+.|.+. ++.+|+..+ |-+.. ....+ ...|++.|..|+|+++.--+
T Consensus 88 pqI~d~I~~g------eIdlVInt~dPl~~~-~h~~D---~~~IRR~A~~~~IP~~Tnla 137 (178)
T 1vmd_A 88 QQIGAMIAEG------KIDVLIFFWDPLEPQ-AHDVD---VKALIRIATVYNIPVAITRS 137 (178)
T ss_dssp HHHHHHHHTT------SCCEEEEECCSSSCC-TTSCC---HHHHHHHHHHTTCCEESSHH
T ss_pred chHHHHHHCC------CccEEEEccCccCCC-ccccc---HHHHHHHHHHcCCCEEeCHH
Confidence 3577778662 778888766 33321 11445 89999999999999886533
No 450
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=22.65 E-value=92 Score=26.61 Aligned_cols=47 Identities=13% Similarity=0.109 Sum_probs=32.8
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
++.+.++.+++. ..+.|+++..-+ |.+.+ +.++.|.++ .+.|++++.
T Consensus 233 ~~~~~l~~~~~~-------g~~GiVle~~G~---Gn~p~-~~~~~l~~a-~~~Gi~VV~ 279 (337)
T 4pga_A 233 VTDTAYKALAQN-------GAKALIHAGTGN---GSVSS-RVVPALQQL-RKNGTQIIR 279 (337)
T ss_dssp CCSHHHHHHHHT-------TCSEEEEEEBTT---TBCCT-TTHHHHHHH-HHTTCEEEE
T ss_pred CCHHHHHHHHhc-------CCCEEEEEEeCC---CCCCH-HHHHHHHHH-HHCCCEEEE
Confidence 577788888876 688999987543 56543 567777774 457887664
No 451
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=22.62 E-value=54 Score=28.29 Aligned_cols=25 Identities=4% Similarity=0.025 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
.+.++++++.|+++|+.+|+|--+.
T Consensus 109 l~~~d~~v~~a~~~Gi~vild~h~~ 133 (395)
T 2jep_A 109 LNRIQQVVDYAYNEGLYVIINIHGD 133 (395)
T ss_dssp HHHHHHHHHHHHTTTCEEEECCCGG
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCc
Confidence 3569999999999999999995543
No 452
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=22.58 E-value=1.1e+02 Score=26.32 Aligned_cols=26 Identities=15% Similarity=-0.016 Sum_probs=22.0
Q ss_pred eeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 219 GTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
-..++.+.++++++.|+++|+.+.+=
T Consensus 209 ~~~~~~e~l~~~~~~A~~~g~~v~~H 234 (426)
T 2r8c_A 209 VFGYSEDEIRAIVAEAQGRGTYVLAH 234 (426)
T ss_dssp CBCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 34688999999999999999887663
No 453
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=22.38 E-value=96 Score=25.84 Aligned_cols=50 Identities=16% Similarity=0.013 Sum_probs=34.0
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~De 245 (285)
.++|++.+++. ..+.|-+.... . |.-.+.+.+..+.++|.++|++|++-.
T Consensus 126 ~~el~~~~~~~------g~~Gv~l~~~~--~-~~~l~d~~~~~~~~~~~e~~lpv~iH~ 175 (336)
T 2wm1_A 126 VKEMERCVKEL------GFPGVQIGTHV--N-EWDLNAQELFPVYAAAERLKCSLFVHP 175 (336)
T ss_dssp HHHHHHHHHTS------CCSEEEEESEE--T-TEETTCGGGHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHcc------CCeEEEECCcC--C-CCCCCCccHHHHHHHHHHcCCEEEECC
Confidence 56677777431 45666553322 1 455566679999999999999998853
No 454
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=22.37 E-value=1.4e+02 Score=24.72 Aligned_cols=39 Identities=21% Similarity=0.463 Sum_probs=27.2
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+..+++++..... + .+.+.+.++.+.++++|+++++|-.
T Consensus 129 ~~~~v~~~g~~~~--~--~~~~~~~~~~~~a~~~g~~v~~Dp~ 167 (323)
T 2f02_A 129 QAEIVTISGSLAK--G--LPSDFYQELVQKAHAQEVKVLLDTS 167 (323)
T ss_dssp TCSEEEEESCCCB--T--SCTTHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEECCCCC--C--CChHHHHHHHHHHHHCCCEEEEECC
Confidence 3467776543211 1 2456689999999999999999965
No 455
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=22.23 E-value=1.1e+02 Score=23.60 Aligned_cols=19 Identities=5% Similarity=0.137 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHcCCeEE
Q psy5413 224 MQWLRELKARCQEHNIPVH 242 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li 242 (285)
.++-+.+.++|+++|+.++
T Consensus 160 ~~~~~~i~~~a~~~~v~~i 178 (232)
T 3dc7_A 160 SDYEAAIAQMTADYGVPHL 178 (232)
T ss_dssp HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCcEE
Confidence 5567788899999998754
No 456
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=22.18 E-value=1.2e+02 Score=25.31 Aligned_cols=50 Identities=12% Similarity=0.127 Sum_probs=35.0
Q ss_pred HHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 187 LDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 187 ~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~De 245 (285)
.++|++.+++. ..+.|-+.+..+ |.-++...+..+.+.|.++|++|.+--
T Consensus 113 ~~el~r~~~~~------G~~Gv~l~~~~~---~~~l~d~~~~p~~~~~~e~g~pv~iH~ 162 (312)
T 3ij6_A 113 CKVISSIKDDE------NLVGAQIFTRHL---GKSIADKEFRPVLAQAAKLHVPLWMHP 162 (312)
T ss_dssp HHHHHHHHHCT------TEEEEEEESEET---TEETTSTTTHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHhC------CCceEeccCCCC---CCCCCCccHHHHHHHHHHcCCeEEEcC
Confidence 46777776542 566776654322 555566679999999999999998865
No 457
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=22.03 E-value=1.7e+02 Score=22.63 Aligned_cols=39 Identities=21% Similarity=0.252 Sum_probs=25.5
Q ss_pred ceEEEEEecccCCCCeeeC------------CHHHHHHHHHHHHHcCCeEEE
Q psy5413 204 STSLVCVENTHNYCGGTVL------------PMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~------------~~~~l~~i~~la~~~gi~li~ 243 (285)
++++|++..++... -..+ -.+.+..+.++++++|+.+++
T Consensus 119 ~~~lliiD~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~l~~~~~~~~~tvi~ 169 (243)
T 1n0w_A 119 RYALLIVDSATALY-RTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVI 169 (243)
T ss_dssp CEEEEEEETSSGGG-C-------CHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred CceEEEEeCchHHH-HHHhcCCccHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 68999999988642 1111 123466677888888887765
No 458
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=22.02 E-value=2.1e+02 Score=22.46 Aligned_cols=43 Identities=12% Similarity=0.091 Sum_probs=31.7
Q ss_pred HHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccC
Q psy5413 188 DEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARL 248 (285)
Q Consensus 188 ~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~ 248 (285)
+++++.+++ . ..++++.|+.. .+++++.|.+.|+-.|..+...
T Consensus 137 ~dl~eli~~-------~-D~ViIAvPs~~----------~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 137 DDLEQHVKD-------E-SVAILTVPAVA----------AQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp GGHHHHCSS-------C-CEEEECSCHHH----------HHHHHHHHHHTTCCEEEECSSC
T ss_pred hhHHHHHHh-------C-CEEEEecCchh----------HHHHHHHHHHcCCCEEEEcCce
Confidence 447777765 3 56666655532 5789999999999999998855
No 459
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=21.92 E-value=95 Score=21.85 Aligned_cols=52 Identities=21% Similarity=0.334 Sum_probs=34.7
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCCh
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPL 250 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~ 250 (285)
-......+|+.. +..+|++.+-- -|.+....|..+|+++||+++.-.....+
T Consensus 29 G~~~v~kaI~~g------ka~LVvIA~D~-------~p~~i~~~l~~lC~~~~VP~~~v~sk~~L 80 (113)
T 3jyw_G 29 GLNHVVALIENK------KAKLVLIANDV-------DPIELVVFLPALCKKMGVPYAIVKGKARL 80 (113)
T ss_dssp SHHHHHHTTTTT------CCSEEEECSCC-------SSHHHHTTHHHHHHHTTCCCEECSCSTTT
T ss_pred hHHHHHHHHHcC------CceEEEEeCCC-------CHHHHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 456778888762 66788884433 23344567889999999988865544433
No 460
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=21.92 E-value=65 Score=28.79 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.+.++++++.|+++|+.+|+|--.
T Consensus 133 l~~ld~vV~~a~~~Gi~VIldlH~ 156 (458)
T 3qho_A 133 LQIMEKIIKKAGDLGIFVLLDYHR 156 (458)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEeccc
Confidence 577999999999999999999553
No 461
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=21.63 E-value=62 Score=28.19 Aligned_cols=23 Identities=17% Similarity=0.101 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea 246 (285)
.+.|.++++.|+++||.+|+|=.
T Consensus 99 ~~~LD~~i~~A~k~GI~viL~l~ 121 (383)
T 3pzg_A 99 FERLDYTIAKAKELGIKLIIVLV 121 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcc
Confidence 67899999999999999999953
No 462
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=21.52 E-value=67 Score=28.30 Aligned_cols=22 Identities=18% Similarity=0.093 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEeC
Q psy5413 224 MQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~De 245 (285)
.+.|.++.++|+++|+.||+|-
T Consensus 110 ~~~lD~~l~~a~~~Gi~vil~l 131 (440)
T 1uuq_A 110 LQGLDYLLVELAKRDMTVVLYF 131 (440)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEc
Confidence 4557799999999999999983
No 463
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=21.52 E-value=1.3e+02 Score=26.73 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=33.1
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
++.+.++..++. ..+.|+++..-+ |.+. .+.++.|.+ +.+.|++|+.
T Consensus 313 ~~~~~l~a~~~~-------g~~GiVleg~G~---Gn~p-~~~~~~l~~-a~~~Gi~VV~ 359 (435)
T 2d6f_A 313 ISPDIIKWHLDE-------GYRGIVIEGTGL---GHCP-DTLIPVIGE-AHDMGVPVAM 359 (435)
T ss_dssp CCHHHHHHHHHT-------TCSEEEEEEBTT---TBCC-GGGHHHHHH-HHHTTCCEEE
T ss_pred CCHHHHHHHHhC-------CCCEEEEecCCC---CCcC-HHHHHHHHH-HHhCCCEEEE
Confidence 577888888866 678999988554 6654 566777777 4567877653
No 464
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=21.26 E-value=2.2e+02 Score=20.11 Aligned_cols=49 Identities=8% Similarity=0.162 Sum_probs=34.6
Q ss_pred CCHHHHHHHhcccccccCCceEEEEEecccCCCCeee-CCHHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 185 FDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTV-LPMQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 185 ~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~-~~~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
++.++++..+++ ++-+|++-.-.. +.+ .+ +++.+..+++||-+-+-...
T Consensus 49 l~~~~l~~ll~~-------~~evliiGtG~~---~~~~~~----~~~~~~l~~~gI~ve~m~T~ 98 (122)
T 2ab1_A 49 VQPADVKEVVEK-------GVQTLVIGRGMS---EALKVP----SSTVEYLKKHGIDVRVLQTE 98 (122)
T ss_dssp CCHHHHHHHHTT-------CCSEEEEEECSS---CCSCCC----HHHHHHHHHTTCEEEEECHH
T ss_pred CCHHHHHHHhhC-------CCCEEEECCCCC---CccCCC----HHHHHHHHHcCCEEEEeCHH
Confidence 688999999887 677888744332 555 55 56667778899887766553
No 465
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=21.10 E-value=63 Score=31.22 Aligned_cols=24 Identities=17% Similarity=0.115 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEeCcc
Q psy5413 224 MQWLRELKARCQEHNIPVHMDGAR 247 (285)
Q Consensus 224 ~~~l~~i~~la~~~gi~li~Dea~ 247 (285)
.++++++++.||++||-||+|-|+
T Consensus 378 ~~efk~LV~~aH~~GIkVIlDvV~ 401 (884)
T 4aio_A 378 IIEYRQMVQALNRIGLRVVMDVVY 401 (884)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCceeeeecc
Confidence 456999999999999999999983
No 466
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=21.06 E-value=2.2e+02 Score=24.52 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=39.8
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChh---hh--cccCCeEEEeccc
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLA---EV--CASVDTVMFCLSK 266 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~---~~--~~~~dv~~~s~sK 266 (285)
+..+..+|-|..+ ++++.+++++++.++++..||.-.+.. .+ ...+|++....+|
T Consensus 215 ~~~i~~iEeP~~~--------~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~ 274 (389)
T 3s5s_A 215 GADVALLEQPVPR--------DDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK 274 (389)
T ss_dssp TCEEEEEECCSCT--------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCCeEEEECCCCc--------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC
Confidence 4567888888743 227888888888999999999955332 22 2457888887777
No 467
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=20.64 E-value=59 Score=26.90 Aligned_cols=62 Identities=11% Similarity=0.105 Sum_probs=37.7
Q ss_pred cccceeeeeee-cCCCCCCCHHHHHHH---hcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 168 QIGRVLMRGVT-NQKDGTFDLDEMEAK---FSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 168 ~~~g~~~~~~~-~~~~~~~d~~~l~~~---i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
+.+|.+.+.+. ..++....+.+|.+. ++++ ++++|++++..++ ...+.|.++|++.|+.+.+
T Consensus 178 ~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~------~v~~if~e~~~~~--------~~~~~l~~~a~~~g~~v~~ 243 (282)
T 3mfq_A 178 ASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDH------NIKAIFTESTTNP--------ERMKKLQEAVKAKGGQVEV 243 (282)
T ss_dssp HHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHH------TCCEEECBTTSCT--------HHHHHHHHHHHTTSCCCEE
T ss_pred HHCCCeEecccccCCCCCCCHHHHHHHHHHHHHc------CCCEEEEeCCCCh--------HHHHHHHHHHHhcCCceEE
Confidence 34566655442 112233455555554 4442 7889998775543 2277888899999987654
No 468
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=20.64 E-value=1.7e+02 Score=24.74 Aligned_cols=37 Identities=11% Similarity=0.196 Sum_probs=26.4
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCc
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGA 246 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea 246 (285)
+..+++++.-.. +.... +.++.+.|+++|+.+++|-.
T Consensus 186 ~~~~v~~~g~~~---~~~~~---~~~~~~~a~~~g~~v~~D~~ 222 (352)
T 4e84_A 186 QHDVVLMSDYAK---GGLTH---VTTMIEKARAAGKAVLVDPK 222 (352)
T ss_dssp GCSEEEEECCSS---SSCSS---HHHHHHHHHHTTCEEEEECC
T ss_pred cCCEEEEeCCCC---CCHHH---HHHHHHHHHhcCCEEEEECC
Confidence 346777764221 33333 88999999999999999965
No 469
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=20.64 E-value=61 Score=28.83 Aligned_cols=25 Identities=24% Similarity=0.238 Sum_probs=22.6
Q ss_pred eeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 219 GTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 219 G~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
|..++.+++++|.+.|+++||-||-
T Consensus 89 ~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 89 GTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCeeee
Confidence 5589999999999999999999874
No 470
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=20.44 E-value=1e+02 Score=25.04 Aligned_cols=31 Identities=10% Similarity=0.169 Sum_probs=17.2
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEE
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHM 243 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 243 (285)
++.+|++.+..... +.+..+.+++.|+++++
T Consensus 58 ~vdgiIi~~~~~~~---------~~~~~~~~~~~~iPvV~ 88 (313)
T 3m9w_A 58 GVDVLVIIPYNGQV---------LSNVVKEAKQEGIKVLA 88 (313)
T ss_dssp TCSEEEEECSSTTS---------CHHHHHHHHTTTCEEEE
T ss_pred CCCEEEEeCCChhh---------hHHHHHHHHHCCCeEEE
Confidence 56677765544321 34445556667777654
No 471
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=20.44 E-value=1.8e+02 Score=23.80 Aligned_cols=35 Identities=9% Similarity=0.069 Sum_probs=25.7
Q ss_pred ceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHc-CCeEEEeCc
Q psy5413 204 STSLVCVENTHNYCGGTVLPMQWLRELKARCQEH-NIPVHMDGA 246 (285)
Q Consensus 204 ~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~-gi~li~Dea 246 (285)
++.+|.+ |.+.+.+.++.+.++.+++ ++++++|-+
T Consensus 74 ~~daik~--------G~l~s~~~i~~v~~~l~~~~~~~vv~DPv 109 (282)
T 3h74_A 74 HFDQALI--------GYVGSVALCQQITTYLEQQTLSLLVVDPV 109 (282)
T ss_dssp CCSEEEE--------CCCCSHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred ccCEEEE--------CCCCCHHHHHHHHHHHHHCCCCcEEEcCe
Confidence 5567776 7777777788888887776 577888865
No 472
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=20.37 E-value=2.2e+02 Score=22.86 Aligned_cols=65 Identities=12% Similarity=0.179 Sum_probs=44.0
Q ss_pred CCCCCCHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeCccCChhhhcccCCeE
Q psy5413 181 KDGTFDLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDGARLPLAEVCASVDTV 260 (285)
Q Consensus 181 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~Dea~~~~~~~~~~~dv~ 260 (285)
|+...+.+.+++..+. .+.+|.+-..+ | ...+.+.++.+..++++++++. +.+. ......++|-+
T Consensus 20 Pdk~~~~~~l~~~~~~-------GtDaI~vGgs~----g--vt~~~~~~~v~~ik~~~~Piil-~p~~-~~~~~~gaD~i 84 (235)
T 3w01_A 20 PAKHISDDDLDAICMS-------QTDAIMIGGTD----D--VTEDNVIHLMSKIRRYPLPLVL-EISN-IESVMPGFDFY 84 (235)
T ss_dssp TTSCCCHHHHHHHHTS-------SCSEEEECCSS----C--CCHHHHHHHHHHHTTSCSCEEE-ECCC-STTCCTTCSEE
T ss_pred CCCcCCHHHHHHHHHc-------CCCEEEECCcC----C--cCHHHHHHHHHHhcCcCCCEEE-ecCC-HHHhhcCCCEE
Confidence 4555577888887655 67888884433 2 3567788888888889999988 6654 23334566644
No 473
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=20.18 E-value=94 Score=26.59 Aligned_cols=51 Identities=8% Similarity=0.063 Sum_probs=34.6
Q ss_pred CHHHHHHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEeC
Q psy5413 186 DLDEMEAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMDG 245 (285)
Q Consensus 186 d~~~l~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~De 245 (285)
..++|++++++. ..+.|.+.+..+ +..++...+..+.+.|.++|++|.+=-
T Consensus 143 a~~El~r~~~~~------G~~Gv~l~~~~~---~~~~~d~~~~p~~~~~~e~g~pV~iH~ 193 (357)
T 3nur_A 143 AAREFERCINDL------GFKGALIMGRAQ---DGFLDQDKYDIIFKTAENLDVPIYLHP 193 (357)
T ss_dssp HHHHHHHHHHTT------CCCCEEEESCBT---TBCTTSGGGHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHhhc------CceEEEeCCCCC---CCCCCCccHHHHHHHHHhcCCeEEEec
Confidence 456777777542 456666654322 334555678999999999999988754
No 474
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=20.11 E-value=1.3e+02 Score=22.87 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=32.4
Q ss_pred CCHHHH-HHHhcccccccCCceEEEEEecccCCCCeeeCCHHHHHHHHHHHHHcCCeEEEe
Q psy5413 185 FDLDEM-EAKFSTADNIHCASTSLVCVENTHNYCGGTVLPMQWLRELKARCQEHNIPVHMD 244 (285)
Q Consensus 185 ~d~~~l-~~~i~~~~~~~~~~~~~v~i~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 244 (285)
..++++ .+.|.+. +--+|++ || +...+..+++.+++++ +++++.-
T Consensus 22 ~~i~~a~a~lI~~A------kRPvIl~-------Gg-v~~~~A~~eL~~~ae~-~iPVvtT 67 (174)
T 1ytl_A 22 LEKGKPVANMIKKA------KRPLLIV-------GP-DMTDEMFERVKKFVEK-DITVVAT 67 (174)
T ss_dssp CCCHHHHHHHHHHC------SSEEEEE-------CS-CCCHHHHHHHHHHHTS-SSEEEEE
T ss_pred ccHHHHHHHHHHcC------CCCEEEE-------CC-CCCccHHHHHHHHHHc-CCCEEEc
Confidence 356777 8888762 2235555 36 6667778999999999 9999954
Done!