BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy5425
         (233 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P12646|G6PD_DROME Glucose-6-phosphate 1-dehydrogenase OS=Drosophila melanogaster
          GN=Zw PE=1 SV=2
          Length = 524

 Score = 47.4 bits (111), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 24/34 (70%)

Query: 13 LTLIRKSLRSATQEVEGTHFDQNIPHIFVTFGAS 46
          L LI KSL+S T   EGTHFD  IPH FV FGAS
Sbjct: 11 LDLIIKSLKSPTMVCEGTHFDGKIPHTFVIFGAS 44


>sp|Q27638|G6PD_DROYA Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Drosophila
          yakuba GN=Zw PE=3 SV=1
          Length = 518

 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 24/34 (70%)

Query: 13 LTLIRKSLRSATQEVEGTHFDQNIPHIFVTFGAS 46
          L LI KSL+S T   EGTHFD  IPH FV FGAS
Sbjct: 5  LDLIIKSLKSPTMVCEGTHFDGKIPHTFVIFGAS 38


>sp|P41571|G6PD_CERCA Glucose-6-phosphate 1-dehydrogenase OS=Ceratitis capitata GN=ZW
          PE=2 SV=1
          Length = 526

 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%)

Query: 4  SVIGNTEETLTLIRKSLRSATQEVEGTHFDQNIPHIFVTFGAS 46
          S   + E  L  I KSL + T + EGTHFD ++PH FV FGAS
Sbjct: 10 SATDDGETALEHIIKSLETPTMKCEGTHFDSHVPHTFVIFGAS 52


>sp|B4UHG5|PNP_ANASK Polyribonucleotide nucleotidyltransferase OS=Anaeromyxobacter sp.
           (strain K) GN=pnp PE=3 SV=1
          Length = 721

 Score = 36.6 bits (83), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)

Query: 41  VTFGASVSTFFIKVRVFRIGLPNIASNGLSPVEEADLKVSWVALKRADLKV--GWVALKR 98
           + FG  ++     VRV R+G   +A+  L+   EADL V   A + A + V  G   +  
Sbjct: 142 IPFGGPIA----GVRVARVGGQLVANPTLAQRAEADLDVVMAASRDAIVMVEGGAQEVSE 197

Query: 99  ALLLSLLLDAYLVVESLADLILDIRSLPGTARGATFCVPTRMINFRNKTQHATW 152
           A+++  LL     V+ L D    +R+  G     +F  P   +  R K +  TW
Sbjct: 198 AVMIEALLFGQAAVQPLLDAQDALRAATGNKARRSFDPPKNDVELRAKVKALTW 251


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.135    0.404 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,589,800
Number of Sequences: 539616
Number of extensions: 4092008
Number of successful extensions: 80336
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 54003
Number of HSP's gapped (non-prelim): 15380
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)