RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy543
(278 letters)
>d1xoya_ b.18.1.26 (A:) Hypothetical protein AT3g04780/F7O18_27
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 161
Score = 174 bits (444), Expect = 9e-56
Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 9/161 (5%)
Query: 105 SGEESG---VAGHMDLTSFIMKNQCEALNESDQHPFTNCLNTAE-----TYLESDADEQL 156
S ES G +DL FI + E LN+S H N L LESDADEQL
Sbjct: 1 SSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQL 60
Query: 157 ILSFTFNQSVKIHSLKIKAPKDKGPKTLKLFINQPKTLDFDAATSNQSVQQIELTEKDLD 216
++ FNQ +K+HS IK P+++GPKT+K F N+ + F ELTE++L
Sbjct: 61 LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKE-HMCFSNVNDFPPSDTAELTEENLK 119
Query: 217 GTPINLRYVKFQNVQNLQIFVLDNQTEAETTVITHLALIGS 257
G P+ L+YVKFQNV++L IF+ NQ+ +E T + +AL GS
Sbjct: 120 GKPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGS 160
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 86.0 bits (212), Expect = 6e-22
Identities = 49/105 (46%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 1 MSIIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDV 60
+ + + SD F E++ G++L VV FT CGPC RIAP F +S KYP A F +VDV
Sbjct: 1 VGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDV 60
Query: 61 DQNQDLAAAQGVSAMPTFIFFRNKIP-------DPNTLEAKIKQY 98
Q Q AA +SA PTF FFRNK+ D LE KIKQ+
Sbjct: 61 HQCQGTAATNNISATPTFQFFRNKVRIDQYQGADAVGLEEKIKQH 105
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 80.4 bits (198), Expect = 1e-19
Identities = 10/101 (9%), Positives = 29/101 (28%), Gaps = 10/101 (9%)
Query: 8 SDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAA--FFKVDVDQNQD 65
+ + G ++++ + +L R++P D++Q++
Sbjct: 17 EASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEA 76
Query: 66 LAAAQGVSAMPTFIFFRNKIP--------DPNTLEAKIKQY 98
+ V P + F + L ++
Sbjct: 77 IGDRFNVRRFPATLVFTDGKLRGALSGIHPWAELLTLMRSI 117
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 78.3 bits (192), Expect = 5e-19
Identities = 44/103 (42%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 3 IIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQ 62
+ I S F ++ G KLVVVDF+A+WCGPC+ I P F LS KY N F +VDVD
Sbjct: 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDD 61
Query: 63 NQDLAAAQGVSAMPTFIFFRNKIP-------DPNTLEAKIKQY 98
QD+A+ V MPTF FF+ + LEA I +
Sbjct: 62 CQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 76.6 bits (188), Expect = 3e-18
Identities = 11/81 (13%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Query: 8 SDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPN--AAFFKVDVDQNQD 65
S++ + +V++ + +L R++P+ D++Q++
Sbjct: 23 SESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEA 82
Query: 66 LAAAQGVSAMPTFIFFRNKIP 86
+ GV P + F
Sbjct: 83 IGDRFGVFRFPATLVFTGGNY 103
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 70.5 bits (172), Expect = 4e-15
Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 13/124 (10%)
Query: 2 SIIVINSDAHFHTEMNNCG-TKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDV 60
+ + + F + +VV+ C + E L+ +YP F K+
Sbjct: 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRA 159
Query: 61 DQNQDLAAAQGVSAMPTFIFFRNKIPDPNTLEAKIKQYYGVGEESGEESGVAGHMDLTSF 120
+PT + ++ I + V E+ E+ A D+ SF
Sbjct: 160 SNTG-AGDRFSSDVLPTLLVYKGGEL--------ISNFISVAEQFAEDFFAA---DVESF 207
Query: 121 IMKN 124
+ +
Sbjct: 208 LNEY 211
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 64.8 bits (157), Expect = 6e-14
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 9/105 (8%)
Query: 3 IIVINSDAHFHTEMNNC--GTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDV 60
+I ++ + KL+VVDFTASWC PC+ IAP+F +L++K+PN F KVDV
Sbjct: 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDV 65
Query: 61 DQNQDLAAAQGVSAMPTFIFFRNKIP-------DPNTLEAKIKQY 98
D+ + +A V AMPTFIF ++ D + L + ++
Sbjct: 66 DELKAVAEEWNVEAMPTFIFLKDGKLVDKTVGADKDGLPTLVAKH 110
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 62.6 bits (151), Expect = 4e-13
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
Query: 3 IIVINSDAHFHTEMN--NCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDV 60
+I ++ ++ ++ N LVVVDFTASWCGPC+ IAP F L++K PN F KVD
Sbjct: 8 VIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDT 67
Query: 61 DQNQDLAAAQGVSAMPTFIFFRNKIP-------DPNTLEAKIKQY 98
D+ + +A+ + AMPTF+F + + L++ I ++
Sbjct: 68 DELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 61.4 bits (148), Expect = 1e-12
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 2 SIIVINSDAHFHTEMNNCGT--KLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVD 59
S+IVI+S A + ++ K +VVDFTA+WCGPC+ IAP+FE LS Y F
Sbjct: 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKV 62
Query: 60 V-DQNQDLAAAQGVSAMPTFIFFRNKIP-------DPNTLEAKIKQY 98
D +A A G++AMPTF +++ + + L+A + ++
Sbjct: 63 DVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKH 109
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 61.1 bits (147), Expect = 1e-12
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 1 MSIIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFF-KVD 59
M +N D F + + V+VDF A WCGPC+ IAPV ++++ +Y + K++
Sbjct: 1 MEAGAVN-DDTFKNVVLE-SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLN 58
Query: 60 VDQNQDLAAAQGVSAMPTFIFFRNKIP--------DPNTLEAKIKQY 98
D++ ++A+ G+ ++PT + F+ T+ +++Y
Sbjct: 59 TDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKY 105
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 61.7 bits (149), Expect = 1e-12
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 6 INSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPN-AAFFKVDVDQNQ 64
+++ + + ++VV+ F W C ++ V ++ K N A + VD+ +
Sbjct: 7 LHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVP 66
Query: 65 DLAAAQGVSAMPTFIFFRN 83
D + T +FF
Sbjct: 67 DFNKMYELYDPCTVMFFFR 85
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 103
Score = 60.6 bits (146), Expect = 1e-12
Identities = 35/103 (33%), Positives = 61/103 (59%), Gaps = 9/103 (8%)
Query: 3 IIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQ 62
+ ++ S A F + ++ +LV+VDF A WCGPC+RIAP +E+ S+ Y F KVDVD+
Sbjct: 2 VKIVTSQAEFDSIISQ--NELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDE 59
Query: 63 NQDLAAAQGVSAMPTFIFFRNKIP-------DPNTLEAKIKQY 98
++ + +++MPTF ++N + + L+ I++Y
Sbjct: 60 VSEVTEKENITSMPTFKVYKNGSSVDTLLGANDSALKQLIEKY 102
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 60.6 bits (146), Expect = 2e-12
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 3 IIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQ 62
+ +N D F + G K VV+D WCGPC+ +AP +E+L+ +Y + F K+D +Q
Sbjct: 8 VTEVNKD-TFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQ 66
Query: 63 -NQDLAAAQGVSAMPTFIFFRNKIP-------DPNTLEAKIKQ 97
N+ LA G+ +PTF + + L I+
Sbjct: 67 ENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQA 109
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like
protein {Archaeon Methanobacterium thermoautotrophicum
[TaxId: 145262]}
Length = 85
Score = 58.9 bits (142), Expect = 4e-12
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 5/81 (6%)
Query: 23 LVVVDFTASWCGPCQRIAPVFEQLSRK-YPNAAFFKVDVDQNQDLAAAQGVSAMPTFIFF 81
+ + FT+ C C V ++ ++ K+D+ +++ A G+ A+P
Sbjct: 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAIN 62
Query: 82 RNK----IPDPNTLEAKIKQY 98
P L I
Sbjct: 63 GVVRFVGAPSREELFEAINDE 83
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein
C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 59.0 bits (142), Expect = 5e-12
Identities = 14/103 (13%), Positives = 35/103 (33%), Gaps = 7/103 (6%)
Query: 7 NSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQNQDL 66
+S + + +N V+ FT + C C V + ++ + + +N
Sbjct: 2 SSGSSGNLSASNRALP-VLTLFTKAPCPLCDEAKEVLQPYKDRFIL-QEVDITLPENSTW 59
Query: 67 AAAQGVSAMPTFIFFRNKI---PDPNTLEAKIKQYYGVGEESG 106
+ + + + + LE ++++ G SG
Sbjct: 60 YERYKFDIPVFHLNGQFLMMHRVNTSKLEKQLRKL--SGPSSG 100
>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 111
Score = 59.2 bits (142), Expect = 5e-12
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 3 IIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYP-NAAFFKVDVD 61
+ + A ++ KLVV+DF A+WCGPC+ I+P +LS ++ N KVDVD
Sbjct: 7 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVD 66
Query: 62 QNQDLAAAQGVSAMPTFIFFRNKIP-------DPNTLEAKIKQY 98
+ +D+A +S+MPTF+F +N + + LE IK
Sbjct: 67 ECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVIKAN 110
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 56.0 bits (134), Expect = 8e-11
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 4 IVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRK-YPNAAFFKVDVDQ 62
I+ +D F T++ ++VDF A WCGPC+ IAP+ ++++ + K+++DQ
Sbjct: 4 IIHLTDDSFDTDVLK-ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ 62
Query: 63 NQDLAAAQGVSAMPTFIFFRNKIPDPNTLEAKIKQYYGVGEESGEESGVAGHMDLTSFIM 122
N A G+ +PT + F+N GE + + G L F+
Sbjct: 63 NPGTAPKYGIRGIPTLLLFKN------------------GEVAATKVGALSKGQLKEFLD 104
Query: 123 KN 124
N
Sbjct: 105 AN 106
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 56.9 bits (136), Expect = 1e-10
Identities = 8/60 (13%), Positives = 16/60 (26%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQNQDLAAAQGVSAMPTFIFF 81
+ ++ WC CQ + R PN + + +D +
Sbjct: 55 RYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLV 114
>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId:
5691]}
Length = 113
Score = 54.5 bits (130), Expect = 3e-10
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 1 MSIIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDV 60
S++ + S F M+ L V FTA WCGPC+ I E+++ ++P F KVD
Sbjct: 8 PSVVDVYSVEQFRNIMSE--DILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDA 65
Query: 61 DQNQDLAAAQGVSAMPTFIFFRNKIP-------DPNTLEAKIKQY 98
D N ++ + V +PTFI R+ +P L K++
Sbjct: 66 DNNSEIVSKCRVLQLPTFIIARSGKMLGHVIGANPGMLRQKLRDI 110
>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin
containing protein Txnl5) {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 54.4 bits (130), Expect = 4e-10
Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 15/95 (15%)
Query: 4 IVINSDAHFHTEMNNCGTKLVVVDFTA-------SWCGPCQRIAPVFEQLSRKYP-NAAF 55
+ ++ FH + K + FT SWC C + PV + + F
Sbjct: 4 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVF 63
Query: 56 FKVDVD-------QNQDLAAAQGVSAMPTFIFFRN 83
V N D V+A+PT + +
Sbjct: 64 IYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGT 98
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase
subunit F (AhpF), N-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 96
Score = 53.6 bits (128), Expect = 4e-10
Identities = 7/59 (11%), Positives = 16/59 (27%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQNQDLAAAQGVSAMPTFIF 80
+ + C C + ++ P +D Q+ + V +P
Sbjct: 16 DFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFV 74
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius,
formerly Bacillus acidocaldarius [TaxId: 405212]}
Length = 105
Score = 53.6 bits (128), Expect = 4e-10
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 2 SIIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFF-KVDV 60
+ + + DA+F + G K V+VDF A+WCGPC+ +APV E+ + + + K++V
Sbjct: 1 ATMTLT-DANFQQAIQ--GDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNV 57
Query: 61 DQNQDLAAAQGVSAMPTFIFFRNKIP--------DPNTLEAKIKQY 98
D+N + + G+ ++PT I F+ P LEA++
Sbjct: 58 DENPETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADV 103
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like
protein {Archaeon Methanococcus jannaschii [TaxId:
2190]}
Length = 85
Score = 51.9 bits (123), Expect = 1e-09
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 21 TKLVVVDFTASWCGPCQRIAPVFEQLSRK-YPNAAFFKVDVDQNQDLAAAQGVSAMPTFI 79
+K+ + FT+ C C V E+++ + ++V +N A G+ A+PT +
Sbjct: 2 SKVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIV 61
Query: 80 FFRNK----IPDPNTLEAKIKQY 98
+ P L IK+
Sbjct: 62 INGDVEFIGAPTKEALVEAIKKR 84
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human
(Homo sapiens) [TaxId: 9606]}
Length = 120
Score = 51.8 bits (123), Expect = 3e-09
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 4 IVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAA----FFKVD 59
+++ ++F + K ++V+F A WCG C+ +AP + + + K KVD
Sbjct: 9 VLVLRKSNFAEALAA--HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVD 66
Query: 60 VDQNQDLAAAQGVSAMPTFIFFRN 83
+ DLA GV PT FFRN
Sbjct: 67 ATEESDLAQQYGVRGYPTIKFFRN 90
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 51.4 bits (122), Expect = 3e-09
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 1 MSIIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAA-FFKVD 59
+I I DA F +E+ + V+V F ASWCGPCQ ++P+ + Y + K++
Sbjct: 2 KGVITIT-DAEFESEVLK-AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLE 59
Query: 60 VDQNQDLAAAQGVSAMPTFIFFRNKIP--------DPNTLEAKIKQY 98
+D N V +P + + + L + + +
Sbjct: 60 IDPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTH 106
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 50.6 bits (120), Expect = 8e-09
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 21/125 (16%)
Query: 3 IIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAF---FKVD 59
+ V+ + +++ + + TK V+++F A WCG C+ +AP +E+L Y + F +
Sbjct: 4 VTVVVAK-NYNEIVLD-DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIA 61
Query: 60 VDQNQDLAAAQGVSAMPTFIFFRNKIPDPNTLEAKIKQYYGVGEESGEESGVAGHMDLTS 119
+ PT + G + SG DL
Sbjct: 62 KVDATANDVPDEIQGFPTIKLYPA----------------GAKGQPVTYSGSRTVEDLIK 105
Query: 120 FIMKN 124
FI +N
Sbjct: 106 FIAEN 110
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 49.9 bits (118), Expect = 9e-09
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 8 SDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRK-YPNAAFFKVDVDQNQDL 66
+D+ + + V+VDF A WCGPC+ IAPV ++L+++ A +K++ D+ +
Sbjct: 5 NDSSWKEFVLE-SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGI 63
Query: 67 AAAQGVSAMPTFIFFRNKIP--------DPNTLEAKIKQY 98
A + ++PT +FF+N +TL I++Y
Sbjct: 64 ATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKY 103
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 140
Score = 49.5 bits (117), Expect = 3e-08
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 2 SIIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAA--FFKVD 59
S + + +N+ K V+V + A WCG C+R+AP +++L+ Y NA
Sbjct: 12 SSVFQLVGKNHDEIVND-PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAK 70
Query: 60 VDQNQDLAAAQGVSAMPTFIFFRN 83
+D ++ + PT + +
Sbjct: 71 LDHTENDVRGVVIEGYPTIVLYPG 94
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 48.1 bits (114), Expect = 7e-08
Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 24/112 (21%)
Query: 22 KLVVVDFTASWCGPCQRIAP--VFEQLSRKYPNAAFFKVDVDQ-----NQDLAA--AQGV 72
VV F + + A + + + V V N+ L
Sbjct: 20 PYSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDD 79
Query: 73 SAMPTFIFFRNKIPDPNTLEAKIKQYYGVGEESGEESGVAGHMDLTSFIMKN 124
P+ F+ + Q + + + +L +F+ N
Sbjct: 80 KNFPSIFLFKGNADEY-------VQLPSHVDVTLD--------NLKAFVSAN 116
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 45.4 bits (107), Expect = 6e-07
Identities = 12/70 (17%), Positives = 20/70 (28%), Gaps = 8/70 (11%)
Query: 22 KLVVVDFTASWCG-----PCQRIAPVFEQLSRKY-PNAAFFKVDVDQNQDLAAA--QGVS 73
K V+V F + +R+A N +L+
Sbjct: 22 KFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKE 81
Query: 74 AMPTFIFFRN 83
+ P F FR+
Sbjct: 82 SYPVFYLFRD 91
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 44.1 bits (103), Expect = 2e-06
Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKY---PNAAFFKVDVDQNQDLAAAQGVSAMPTF 78
++V SWCG C+ + P F + + N ++ ++
Sbjct: 26 LPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPR 85
Query: 79 IFFRNK 84
I F +
Sbjct: 86 ILFLDP 91
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 43.6 bits (102), Expect = 3e-06
Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 27/87 (31%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYP---NAAFFKVDVDQ---------------- 62
K V F+ASWC P + P + + N + D+
Sbjct: 29 KTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLA 88
Query: 63 --------NQDLAAAQGVSAMPTFIFF 81
+ L V ++PT +
Sbjct: 89 LPFEDRKGMEFLTTGFDVKSIPTLVGV 115
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 42.6 bits (99), Expect = 4e-06
Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKY-----PNAAFFKVDVDQNQDLAAAQGVSAMP 76
+ ++ F C C + + + + V+ + + A V A+P
Sbjct: 16 DVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVP 75
Query: 77 TFIFFRN 83
+ N
Sbjct: 76 KIVIQVN 82
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 42.2 bits (98), Expect = 9e-06
Identities = 16/115 (13%), Positives = 29/115 (25%), Gaps = 37/115 (32%)
Query: 20 GTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAF------------------------ 55
G K ++ F + C C+ P + KY +
Sbjct: 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAE 87
Query: 56 ----FKVDVDQNQDLAAAQGVSAMPTFIFFRNK---------IPDPNTLEAKIKQ 97
+ VD + L A +P + F LE ++ +
Sbjct: 88 HDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNR 142
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 119
Score = 40.7 bits (94), Expect = 2e-05
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 2 SIIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKY--PNAAFFKVD 59
S +V + F+ + + LV+ +F A WCG C+ +AP + + + N ++D
Sbjct: 10 SAVVKLATDSFNEYIQS--HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQID 67
Query: 60 VDQNQDLAAAQGVSAMPTFIFFRN 83
+NQDL + P+ F+N
Sbjct: 68 CTENQDLCMEHNIPGFPSLKIFKN 91
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 124
Score = 39.4 bits (91), Expect = 7e-05
Identities = 10/92 (10%), Positives = 29/92 (31%), Gaps = 12/92 (13%)
Query: 4 IVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAA--------- 54
++ + ++ +++ + + + FE AA
Sbjct: 13 VINVNAKNYKNVFKK--YEVLALLYHEPPED-DKASQRQFEMEELILELAAQVLEDKGVG 69
Query: 55 FFKVDVDQNQDLAAAQGVSAMPTFIFFRNKIP 86
F VD +++ +A G++ + F+
Sbjct: 70 FGLVDSEKDAAVAKKLGLTEEDSIYVFKEDEV 101
>d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein
DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli
[TaxId: 562]}
Length = 117
Score = 38.0 bits (87), Expect = 2e-04
Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 12/108 (11%)
Query: 1 MSIIVINSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFK--- 57
++ I + + + K V++D A WC C+ + A
Sbjct: 2 LNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQ 61
Query: 58 ----VDVDQNQDLAAAQGVSAMPTFIFFRNKIPDPNTLEAKIKQYYGV 101
+ Q+ L V +PT +FF D E + G
Sbjct: 62 ANVTANDAQDVALLKHLNVLGLPTILFF-----DGQGQEHPQARVTGF 104
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 37.2 bits (85), Expect = 3e-04
Identities = 7/68 (10%), Positives = 20/68 (29%), Gaps = 5/68 (7%)
Query: 21 TKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAF-----FKVDVDQNQDLAAAQGVSAM 75
+ C C++ A + + + ++ Q + G+ +
Sbjct: 26 KETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTV 85
Query: 76 PTFIFFRN 83
P F+ +
Sbjct: 86 PGFVHITD 93
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 36.0 bits (82), Expect = 0.002
Identities = 12/90 (13%), Positives = 25/90 (27%), Gaps = 30/90 (33%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKV----------------------- 58
K ++ F ASWC C E+ ++ ++ +
Sbjct: 24 KPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLHEKKDGDFQKWYAGL 83
Query: 59 -------DVDQNQDLAAAQGVSAMPTFIFF 81
D +A + +S P++
Sbjct: 84 NYPKLPVVTDNGGTIAQSLNISVYPSWALI 113
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 35.4 bits (80), Expect = 0.002
Identities = 21/107 (19%), Positives = 31/107 (28%), Gaps = 30/107 (28%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVD-------------------- 61
K V+++ A+WC + QLS + D
Sbjct: 21 KPVLLNVWATWCPTSRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGNPYALSLF 80
Query: 62 -QNQDLAAAQGVSAMP-TFIFFRNKIP--------DPNTLEAKIKQY 98
+ L GV P TF+ N I +P E +IK
Sbjct: 81 DGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPL 127
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 35.1 bits (80), Expect = 0.003
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 30/129 (23%)
Query: 22 KLVVVDFTASWCGPCQRIA------PVFEQLSRKYPNAAFFKVDVDQNQDLAAAQGVSAM 75
K ++++ CQ + + + R++ D ++ Q +
Sbjct: 43 KWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDF 102
Query: 76 PTFIFFRNKIPDPNTLEAKIKQYYGVGEESGEESGVAGHMDLTSFIMKNQCEALNESDQH 135
P DP T G++ +D++SF+ + L E H
Sbjct: 103 PYVSIL-----DPRT---------------GQKLVEWHQLDVSSFLDQVT-GFLGE---H 138
Query: 136 PFTNCLNTA 144
+ L+++
Sbjct: 139 GQLDGLSSS 147
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli [TaxId: 562]}
Length = 85
Score = 33.5 bits (76), Expect = 0.004
Identities = 12/57 (21%), Positives = 18/57 (31%)
Query: 25 VVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQNQDLAAAQGVSAMPTFIFF 81
V F S C C R + E+LS + + + VD+ A
Sbjct: 3 TVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETV 59
>d1o73a_ c.47.1.10 (A:) Tryparedoxin I {Trypanosoma brucei brucei
[TaxId: 5702]}
Length = 144
Score = 34.5 bits (78), Expect = 0.004
Identities = 24/118 (20%), Positives = 37/118 (31%), Gaps = 34/118 (28%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFF---KVDVDQ---------------- 62
K V + F+ASWC PC+ PV + K+ A F + D+
Sbjct: 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLA 88
Query: 63 --------NQDLAAAQGVSAMPTFIFFRNKIPDPNTLEAKIKQYYGVGEESGEESGVA 112
+L GV ++PT I + +T I + G
Sbjct: 89 LPFDQRSTVSELGKTFGVESIPTLITI-----NADT--GAIIGTQARTRVIEDPDGAN 139
>d2f8aa1 c.47.1.10 (A:12-195) Glutathione peroxidase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 184
Score = 31.8 bits (71), Expect = 0.056
Identities = 9/56 (16%), Positives = 18/56 (32%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQNQDLAAAQGVSAMPT 77
K+++++ AS G R +L R+ + NQ +
Sbjct: 25 KVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEIL 80
>d2axoa1 c.47.1.19 (A:38-262) Hypothetical protein Atu2684
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 225
Score = 31.1 bits (70), Expect = 0.11
Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 17/79 (21%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRK--------------YPNAA--FFKVDVDQNQ- 64
K VV FT+ C C ++ +K Y + + Q
Sbjct: 6 KGVVELFTSQGCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQY 65
Query: 65 DLAAAQGVSAMPTFIFFRN 83
A G + + T N
Sbjct: 66 GYMRALGRNGVYTPQAILN 84
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia
coli [TaxId: 562]}
Length = 76
Score = 28.5 bits (63), Expect = 0.19
Identities = 9/54 (16%), Positives = 16/54 (29%), Gaps = 5/54 (9%)
Query: 25 VVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQNQDLAAAQGVSAMPTF 78
+ +T + C C E F ++VD+ + A A
Sbjct: 3 ITIYTRNDCVQCHATKRAMENR-----GFDFEMINVDRVPEAAEALRAQGFRQL 51
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 156
Score = 29.8 bits (66), Expect = 0.19
Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 3/95 (3%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQNQDLAAAQGVSA---MPTF 78
K V+ FT CG C ++ + + A + +
Sbjct: 27 KHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKN 86
Query: 79 IFFRNKIPDPNTLEAKIKQYYGVGEESGEESGVAG 113
F + + + A G + GV+G
Sbjct: 87 KAFDDVMAGKSVAPASCDVDIADHYALGVQLGVSG 121
>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 105
Score = 29.3 bits (65), Expect = 0.21
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 25 VVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQN 63
VV F C C++ + QL K F + +
Sbjct: 14 VVVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSD 52
>d2zcta1 c.47.1.10 (A:6-242) Peroxiredoxin {Aeropyrum pernix [TaxId:
56636]}
Length = 237
Score = 27.5 bits (60), Expect = 1.7
Identities = 11/109 (10%), Positives = 27/109 (24%)
Query: 7 NSDAHFHTEMNNCGTKLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQNQDL 66
+ + G V+ A + C F + + + + +
Sbjct: 16 HGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVF 75
Query: 67 AAAQGVSAMPTFIFFRNKIPDPNTLEAKIKQYYGVGEESGEESGVAGHM 115
+ + + I R P + + + G+ V G
Sbjct: 76 SHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVF 124
>d1o8ba2 d.58.40.1 (A:127-198) D-ribose-5-phosphate isomerase
(RpiA), lid domain {Escherichia coli [TaxId: 562]}
Length = 72
Score = 25.0 bits (55), Expect = 2.7
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 80 FFRNKIPDPNTLEAKIKQYYGV 101
+I DP +E I GV
Sbjct: 45 VHGMEILDPIAMENAINAIPGV 66
>d1m0sa2 d.58.40.1 (A:127-198) D-ribose-5-phosphate isomerase
(RpiA), lid domain {Haemophilus influenzae [TaxId: 727]}
Length = 72
Score = 25.0 bits (55), Expect = 2.9
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 80 FFRNKIPDPNTLEAKIKQYYGV 101
I +P +E ++ GV
Sbjct: 46 VHNFSILNPVEIEKELNNVAGV 67
>d1uj4a2 d.58.40.1 (A:132-205) D-ribose-5-phosphate isomerase
(RpiA), lid domain {Thermus thermophilus [TaxId: 274]}
Length = 74
Score = 25.1 bits (55), Expect = 2.9
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 83 NKIPDPNTLEAKIKQYYGV 101
I DP L + + GV
Sbjct: 52 GPIGDPLGLHRALLEIPGV 70
>d1knga_ c.47.1.10 (A:) Thioredoxin-like protein CcmG (CycY, DsbE)
{Bradyrhizobium japonicum [TaxId: 375]}
Length = 144
Score = 25.9 bits (55), Expect = 3.8
Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 31/108 (28%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYP----------------------NAAFFKVD 59
K+ +V+ ASWC PC AP+ +L + F +V
Sbjct: 32 KVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVG 91
Query: 60 VDQNQDLAAAQGVSAMPT-FIFFRNKIP--------DPNTLEAKIKQY 98
VD N + GV +P F+ R P+ L + +
Sbjct: 92 VDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQ 139
>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC,
C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Length = 150
Score = 25.5 bits (55), Expect = 4.8
Identities = 9/71 (12%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 31 SWCGPCQRIAPVFEQLSRKYPNAAFFKVDVDQNQDLAAAQGVSAMPTFIFFRNKI----P 86
+ + + E P V ++ +L GV P+ + ++
Sbjct: 78 AIWTAKDPVFALNEAEKGNLPKEVKTPNIVKKHYELGIQFGVRGTPSIVTSTGELIGGYL 137
Query: 87 DPNTLEAKIKQ 97
P L +++
Sbjct: 138 KPADLLRALEE 148
>d1lk5a2 d.58.40.1 (A:131-210) D-ribose-5-phosphate isomerase
(RpiA), lid domain {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 80
Score = 24.7 bits (54), Expect = 5.1
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 83 NKIPDPNTLEAKIKQYYGV 101
+I DP +E ++ GV
Sbjct: 55 PRIDDPLDMEIELNTIPGV 73
>d1r4wa_ c.47.1.13 (A:) Mitochondrial class kappa glutathione
S-transferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 221
Score = 25.7 bits (55), Expect = 5.9
Identities = 5/29 (17%), Positives = 10/29 (34%)
Query: 52 NAAFFKVDVDQNQDLAAAQGVSAMPTFIF 80
+ K + + A G +PT +
Sbjct: 159 STELVKSKLRETTGAACKYGAFGLPTTVA 187
>d1r5pa_ c.47.1.15 (A:) Circadian oscillation regulator KaiB
{Cyanobacterium (Nostoc sp.) pcc 7120 [TaxId: 1180]}
Length = 90
Score = 24.6 bits (54), Expect = 5.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 58 VDVDQNQDLAAAQGVSAMPTFI 79
+DV +N LA + A PT
Sbjct: 39 IDVLKNPQLAEEDKILATPTLS 60
>d1v58a1 c.47.1.9 (A:62-230) Thiol:disulfide interchange protein
DsbG, C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 169
Score = 25.2 bits (54), Expect = 6.8
Identities = 4/21 (19%), Positives = 8/21 (38%)
Query: 60 VDQNQDLAAAQGVSAMPTFIF 80
+ N+ L G + P +
Sbjct: 124 LSDNEKLMDDLGANVTPAIYY 144
>d2cvba1 c.47.1.10 (A:2-188) Probable thiol-disulfide
isomerase/thioredoxin TTHA0593 {Thermus thermophilus
[TaxId: 274]}
Length = 187
Score = 25.3 bits (54), Expect = 8.1
Identities = 7/35 (20%), Positives = 12/35 (34%)
Query: 22 KLVVVDFTASWCGPCQRIAPVFEQLSRKYPNAAFF 56
L+ V F + C + L+ +Y F
Sbjct: 33 PLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAF 67
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.378
Gapped
Lambda K H
0.267 0.0487 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 949,666
Number of extensions: 41789
Number of successful extensions: 222
Number of sequences better than 10.0: 1
Number of HSP's gapped: 201
Number of HSP's successfully gapped: 64
Length of query: 278
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 194
Effective length of database: 1,254,276
Effective search space: 243329544
Effective search space used: 243329544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.4 bits)