BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5440
(1036 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y4W6|AFG32_HUMAN AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2
Length = 797
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/724 (67%), Positives = 574/724 (79%), Gaps = 39/724 (5%)
Query: 319 PKGFEKFYPD-KNKKSAEKPKEEGKPSDSTQPPLSKPDLSSSRSGSSPWNMGVFGGGGGK 377
PKGFEK++P+ KN K A +PKE ++P +++RS G GG
Sbjct: 70 PKGFEKYFPNGKNGKKASEPKEVMGEKKESKPA------ATTRSSGGGGGGGGKRGGKKD 123
Query: 378 GGQGSGGKGFGDFSGGDKE--KYFMYGLIGSVAVLAAAVMYEMNYK----EITWKDFINN 431
GD DK+ +F++ A+ VM+ + K EITWKDF+NN
Sbjct: 124 DSHWWSRFQKGDIPWDDKDFRMFFLW-----TALFWGGVMFYLLLKRSGREITWKDFVNN 178
Query: 432 VLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPA 491
L+KG+V++LEVVNK++VRV PG + ++WFNIGSVD+FERNLE Q ++ I+
Sbjct: 179 YLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGE 238
Query: 492 NYLPVIYKTEIELSSLSGILPTLLIIG------RRG-----------GGLFGGVMESTAK 534
N +PV+Y E + S L +LPT+LII RRG GGLF V E+TAK
Sbjct: 239 NRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFS-VGETTAK 297
Query: 535 LINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTL 594
++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LTGPPGTGKTL
Sbjct: 298 VLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTL 356
Query: 595 LAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKR 654
LAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+APCILFIDEIDAVGRKR
Sbjct: 357 LAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR 416
Query: 655 GGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVP 714
G NFGG SEQENTLNQLLVEMDGFNTTTNVV+LA TNR D+LD ALLRPGRFDRQIF+
Sbjct: 417 GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIG 476
Query: 715 APDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDL 772
PDIKGRASIFKVHL+PLK D L++D L+RKLA+LTPGF+GAD+ANVCNEAALIAAR L
Sbjct: 477 PPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHL 536
Query: 773 HTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSI 832
+I KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGW+L +ADPLLKVSI
Sbjct: 537 SDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSI 596
Query: 833 IPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQS 892
IPRGKGLGYAQYLP+EQYLY+KEQLLDRMCMTLGGRVSEEIFFGRITTGA+DDL+KVTQS
Sbjct: 597 IPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQS 656
Query: 893 AYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALL 952
AYAQ+ FGMNEKVG +SFD+P+ G+MVLEKPYSE+TA+LID+EVR LI++AY RT ALL
Sbjct: 657 AYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALL 716
Query: 953 IEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEEDTSLPEGL 1012
E KA VEKVA LL+KE+LD+NDM+ELLG RPF EKSTYEEFVEGTGS +EDTSLPEGL
Sbjct: 717 TEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGL 776
Query: 1013 KDWN 1016
KDWN
Sbjct: 777 KDWN 780
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 134/182 (73%), Gaps = 8/182 (4%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 66
+EITWKDF+NN L+KG+V++LEVVNK++VRV PG + ++WFNIGSVD+FERNLE
Sbjct: 168 REITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLE 227
Query: 67 LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIG------RSAEMMGGRPGRRGGG 120
Q ++ I+ N +PV+Y E + S L +LPT+LII R GR GR GG
Sbjct: 228 TLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG 287
Query: 121 LFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM 180
LF V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+
Sbjct: 288 LF-SVGETTAKVLK-DEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 345
Query: 181 LT 182
LT
Sbjct: 346 LT 347
Score = 33.5 bits (75), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 7/37 (18%)
Query: 251 PKGFEKFYPD-KNKKSAEKPKE------EGKPSDSTQ 280
PKGFEK++P+ KN K A +PKE E KP+ +T+
Sbjct: 70 PKGFEKYFPNGKNGKKASEPKEVMGEKKESKPAATTR 106
>sp|Q8JZQ2|AFG32_MOUSE AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1
Length = 802
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/720 (67%), Positives = 572/720 (79%), Gaps = 32/720 (4%)
Query: 319 PKGFEKFYPD-KNKKSAEKPKEEGKPSDSTQPPLSKPDLSSSRSGSSPWNMGVFGGGGGK 377
PKGFEK++P+ KN K A +PKE QP +P + G +
Sbjct: 70 PKGFEKYFPNGKNGKKASEPKEAVGEKKEPQPSGPQPSGGAGGGGGKRRGKKEDSHWWSR 129
Query: 378 GGQGSGGKGFGDFSGGDKE--KYFMYGLIGSVAVLAAAVMYEMNYKEITWKDFINNVLTK 435
+G DF DK+ YF++ + V+ V ++ + +EITWKDF+NN L+K
Sbjct: 130 FQKG-------DFPWDDKDFRMYFLWTALFWGGVMIYFV-FKSSGREITWKDFVNNYLSK 181
Query: 436 GIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLP 495
G+V++LEVVNK++VRV PG + ++WFNIGSVD+FERNLE Q ++ I+ N +P
Sbjct: 182 GVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVP 241
Query: 496 VIYKTEIELSSLSGILPTLLIIG------RRG-----------GGLFGGVMESTAKLINS 538
V+Y E + S L +LPT+LII RRG GGLF V E+TAK++
Sbjct: 242 VVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFS-VGETTAKVLKD 300
Query: 539 SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKA 598
+I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LTGPPGTGKTLLAKA
Sbjct: 301 -EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKA 359
Query: 599 TAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRN 658
TAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+APCILFIDEIDAVGRKRG N
Sbjct: 360 TAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGN 419
Query: 659 FGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDI 718
FGG SEQENTLNQLLVEMDGFNTTTNVV+LA TNR D+LD ALLRPGRFDRQIF+ PDI
Sbjct: 420 FGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDI 479
Query: 719 KGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTI 776
KGRASIFKVHL+PLK D L++D L+RKLA+LTPGF+GAD+ANVCNEAALIAAR L I
Sbjct: 480 KGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAI 539
Query: 777 VMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRG 836
KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGW+L +ADPLLKVSIIPRG
Sbjct: 540 NEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRG 599
Query: 837 KGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQ 896
KGLGYAQYLP+EQYLY+KEQLLDRMCMTLGGRVSEEIFFGRITTGA+DDL+KVTQSAYAQ
Sbjct: 600 KGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQ 659
Query: 897 VAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHK 956
+ FGMNEKVG +SFD+P+ G+MVLEKPYSE+TA++ID+EVR LIS+AY RT ALL E K
Sbjct: 660 IVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKK 719
Query: 957 ASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEEDTSLPEGLKDWN 1016
A VEKVA LL+KE+LD+NDM++LLG RPF EKSTYEEFVEGTGS +EDTSLPEGL+DWN
Sbjct: 720 ADVEKVALLLLEKEVLDKNDMVQLLGPRPFTEKSTYEEFVEGTGSLDEDTSLPEGLQDWN 779
Score = 202 bits (515), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 138/188 (73%), Gaps = 8/188 (4%)
Query: 1 MYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDS 60
+++ + +EITWKDF+NN L+KG+V++LEVVNK++VRV PG + ++WFNIGSVD+
Sbjct: 161 VFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDT 220
Query: 61 FERNLELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIG------RSAEMMGGRP 114
FERNLE Q ++ I+ N +PV+Y E + S L +LPT+LII R GR
Sbjct: 221 FERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRT 280
Query: 115 GRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
GR GGLF V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAK
Sbjct: 281 GRGMGGLF-SVGETTAKVLK-DEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 338
Query: 175 IPKGAMLT 182
IPKGA+LT
Sbjct: 339 IPKGAILT 346
>sp|Q2KJI7|AFG32_BOVIN AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1
Length = 805
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/738 (66%), Positives = 577/738 (78%), Gaps = 49/738 (6%)
Query: 314 LSENVPKGFEKFYPD-KNKKSAEKPKE------EGKPSDSTQPPLSKPDLSSSRS---GS 363
L PKGFEK++P+ KN K +PKE E KP+ + +P R
Sbjct: 66 LCSRPPKGFEKYFPNGKNGKKTSEPKEVMGEKKEPKPAAAPRPSGGGVGGGGKRGGKKDD 125
Query: 364 SPWNMGVFGGGGGKGGQGSGGKGFGDFSGGDKE--KYFMYGLIGSVAVLAAAVMYEMNYK 421
S W F G D DKE YF++ + L +++ + +
Sbjct: 126 SHW-WSRFQKG--------------DIPWDDKEFKMYFLWTALFWGGFLFY-FLFKSSGR 169
Query: 422 EITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLEL 481
EITWKDF NN L+KG+V++LEVVNK++VRV PG + ++WFNIGSVD+FERNLE
Sbjct: 170 EITWKDFANNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLET 229
Query: 482 AQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIG------RRG-----------GGL 524
Q ++ I+ N +PV+Y E + S L +LPT+LII RRG GGL
Sbjct: 230 LQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGL 289
Query: 525 FGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 584
F V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+L
Sbjct: 290 FS-VGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAIL 347
Query: 585 TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFI 644
TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+APCILFI
Sbjct: 348 TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFI 407
Query: 645 DEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRP 704
DEIDAVGRKRG NFGG SEQENTLNQLLVEMDGFNTTTNVV+LA TNR D+LD AL+RP
Sbjct: 408 DEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRP 467
Query: 705 GRFDRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCN 762
GRFDRQIF+ PDIKGRASIFKVHL+PLK D L+++ L+RKLA+LTPGF+GAD+ANVCN
Sbjct: 468 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCN 527
Query: 763 EAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLR 822
EAALIAAR L +I KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGW+L
Sbjct: 528 EAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLE 587
Query: 823 YADPLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGA 882
+ADPLLKVSIIPRGKGLGYAQYLPREQYLY++EQLLDRMCMTLGGRVSEEIFFGRITTGA
Sbjct: 588 HADPLLKVSIIPRGKGLGYAQYLPREQYLYTREQLLDRMCMTLGGRVSEEIFFGRITTGA 647
Query: 883 EDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLIS 942
+DDL+KVTQSAYAQ+ FGMNEKVG +SFD+P+ G+MVLEKPYSE+TA+LID+EVR LI+
Sbjct: 648 QDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILIN 707
Query: 943 NAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSF 1002
+AY RT ALL E KA VEKVA LL+KE+LD+NDM+ELLG RPF EKSTYEEFVEGTGS
Sbjct: 708 DAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSL 767
Query: 1003 EEDTSLPEGLKDWNKDKE 1020
+EDTSLPEGLKDWN+++E
Sbjct: 768 DEDTSLPEGLKDWNRERE 785
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 137/188 (72%), Gaps = 8/188 (4%)
Query: 1 MYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDS 60
+++ + +EITWKDF NN L+KG+V++LEVVNK++VRV PG + ++WFNIGSVD+
Sbjct: 163 LFKSSGREITWKDFANNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDT 222
Query: 61 FERNLELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIG------RSAEMMGGRP 114
FERNLE Q ++ I+ N +PV+Y E + S L +LPT+LII R GR
Sbjct: 223 FERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRT 282
Query: 115 GRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
GR GGLF V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAK
Sbjct: 283 GRGMGGLF-SVGETTAKVLK-DEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 340
Query: 175 IPKGAMLT 182
IPKGA+LT
Sbjct: 341 IPKGAILT 348
>sp|Q920A7|AFG31_MOUSE AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2
Length = 789
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/658 (68%), Positives = 530/658 (80%), Gaps = 36/658 (5%)
Query: 388 GDFSGGDKEKYFMYGLIGSVAVLAAAVMYEMNY-------KEITWKDFINNVLTKGIVEK 440
G+F DK+ S+AVL A V Y KEITWK F+ L +G+V++
Sbjct: 130 GEFPWDDKD-------FRSLAVLGAGVAAGFLYFYFRDPGKEITWKHFVQYYLARGLVDR 182
Query: 441 LEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKT 500
LEVVNK++VRV +PG + + F+WFNIGSVD+FERNLE AQ ++ I+P N V+Y T
Sbjct: 183 LEVVNKQFVRVIPVPGTTSE--RFVWFNIGSVDTFERNLESAQWELGIEPTNQAAVVYTT 240
Query: 501 EIELSSLSGILPTLLIIG----------------RRGGGLFGGVMESTAKLINSSDIGVR 544
E + S L ++PTL+++ RGGGLF V E+TAK++ + +I VR
Sbjct: 241 ESDGSFLRSLVPTLVLVSILLYAMRRGPMGTGRGGRGGGLFS-VGETTAKILKN-NIDVR 298
Query: 545 FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN 604
F DVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN
Sbjct: 299 FADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN 358
Query: 605 VPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSE 664
VPFITV+GSEFLEMFVGVGP+RVRDMF+MARKHAPCILFIDEIDA+GRKRG + GG SE
Sbjct: 359 VPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSE 418
Query: 665 QENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASI 724
QENTLNQ+LVEMDGFN++TNVVVLA TNR D+LD AL RPGRFDRQI++ PDIKGR+SI
Sbjct: 419 QENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSI 478
Query: 725 FKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
FKVHL+PLK D L +D LSRKLAALTPGFTGADI+NVCNEAALIAAR L ++ +HFE
Sbjct: 479 FKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFE 538
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
QAIERV+ G+EKKT VLQP EK TVAYHEAGHAV GWFL +ADPLLKVSIIPRGKGLGYA
Sbjct: 539 QAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYA 598
Query: 843 QYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGM 902
QYLPREQ+LY++EQL DRMCM LGGRV+E++FFG+ITTGA+DDL+KVTQSAYAQ+ FGM
Sbjct: 599 QYLPREQFLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQIVQFGM 658
Query: 903 NEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKV 962
+EK+G VSFD P+ GE ++EKPYSE+TAQLID EVR L+ +AY RT LL + + VEKV
Sbjct: 659 SEKLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKV 718
Query: 963 AERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEEDTSLPEGLKDWNKDKE 1020
RLL+KE+L++ DMIELLG RPF EKSTYEEFVEGTGS EEDTSLPEGLKDWNK +E
Sbjct: 719 GRRLLEKEVLEKADMIELLGPRPFAEKSTYEEFVEGTGSLEEDTSLPEGLKDWNKGRE 776
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/181 (55%), Positives = 130/181 (71%), Gaps = 9/181 (4%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 66
KEITWK F+ L +G+V++LEVVNK++VRV +PG + + F+WFNIGSVD+FERNLE
Sbjct: 163 KEITWKHFVQYYLARGLVDRLEVVNKQFVRVIPVPGTTSE--RFVWFNIGSVDTFERNLE 220
Query: 67 LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMGGRPGRRGGG-----L 121
AQ ++ I+P N V+Y TE + S L ++PTL+++ M P G G L
Sbjct: 221 SAQWELGIEPTNQAAVVYTTESDGSFLRSLVPTLVLVSILLYAMRRGPMGTGRGGRGGGL 280
Query: 122 FGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
F V E+TAK++ + +I VRF DVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGAML
Sbjct: 281 FS-VGETTAKILKN-NIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAML 338
Query: 182 T 182
T
Sbjct: 339 T 339
>sp|Q9HGM3|YTA12_SCHPO Mitochondrial respiratory chain complexes assembly protein rca1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yta12 PE=3 SV=1
Length = 773
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/643 (56%), Positives = 459/643 (71%), Gaps = 29/643 (4%)
Query: 373 GGGGKGGQGSGGKGFGDFSGGDKEKYFMYGLIGSV---AVLAAAVMYEM-----NYKEIT 424
G K GQ + +G D +K F L G+ +L A ++Y + N +EIT
Sbjct: 101 ANGRKNGQKNDDSKKKGLNGNDPKKVFEIALNGNTILGGILVAYILYNVLSPNANMQEIT 160
Query: 425 WKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELAQA 484
W+DF L KG+VE+L VVN+ V +L G G+ +F+IGS+DSF+R LE AQ
Sbjct: 161 WQDFRQQFLDKGLVERLVVVNRNMV-RVILRGGVASGSGQYYFSIGSIDSFDRKLEDAQR 219
Query: 485 QMHIDPANYLPVIYKTEIE-LSSLSGILPTLLIIG------RRGGGLFGGVM-------E 530
Q+ I P+ ++PV Y E+ L++L PTLLIIG RR G GG +
Sbjct: 220 QLGIPPSEFVPVAYHDEVSVLATLLSFAPTLLIIGSVIYLSRRASGAAGGGQGGIFGIGK 279
Query: 531 STAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
S AK+ N +DI ++F DVAG +EAK EIMEFV FLKNP+ Y LGAKIP+GA+L+GPPG
Sbjct: 280 SRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPG 339
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKATAGEANVPF++VSGSEFLEMFVGVGPSRVRD+F+ ARK+APCI+FIDEIDA
Sbjct: 340 TGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDA 399
Query: 650 VGRKRG-GRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFD 708
+G+ RG G FG + E+E+TLNQLLVEMDGF ++ ++VV A TNR DVLD ALLRPGRFD
Sbjct: 400 IGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFD 459
Query: 709 RQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIA 768
RQI + PDI GR IFKVHLK +K + D ++++LA LT GFTGADI NVCNE ALIA
Sbjct: 460 RQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIA 519
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
AR + M HFEQAIERV AG+EKK+ VL PEEK TVA+HEAGHAVAGWF+ Y DPLL
Sbjct: 520 ARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVAGWFMEYVDPLL 579
Query: 829 KVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDL 886
KVSIIPR + LGYA YLP++QYL S+ Q+LD+M M L GRVSEEIFFG +IT+GA DD
Sbjct: 580 KVSIIPRAQALGYASYLPKDQYLMSRGQILDQMGMALAGRVSEEIFFGPEKITSGASDDF 639
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYT 946
+KVT+ A A V +GM+ VG +++ P ++KP+SE+TAQ+ID E+R L+ +AY
Sbjct: 640 QKVTRMAQAYVTQYGMSPTVGTIAY--PIDTRETVQKPFSEATAQMIDEEIRKLVKHAYE 697
Query: 947 RTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEK 989
RTK LL+EHK +E +A+RLL+KE++ N++ +LG RP+ K
Sbjct: 698 RTKKLLLEHKQGLENIAQRLLQKEVITYNEVETILGPRPYAYK 740
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 117/187 (62%), Gaps = 15/187 (8%)
Query: 5 NYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERN 64
N +EITW+DF L KG+VE+L VVN+ V +L G G+ +F+IGS+DSF+R
Sbjct: 155 NMQEITWQDFRQQFLDKGLVERLVVVNRNMV-RVILRGGVASGSGQYYFSIGSIDSFDRK 213
Query: 65 LELAQAQMHIDPANYLPVIYKTEIE-LSSLSGILPTLLIIGRSAEMMGGRPGRRGGGLFG 123
LE AQ Q+ I P+ ++PV Y E+ L++L PTLLIIG + RR G G
Sbjct: 214 LEDAQRQLGIPPSEFVPVAYHDEVSVLATLLSFAPTLLIIGSVIYL-----SRRASGAAG 268
Query: 124 GVM-------ESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKI 175
G +S AK+ N +DI ++F DVAG +EAK EIMEFV FLKNP+ Y LGAKI
Sbjct: 269 GGQGGIFGIGKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKI 328
Query: 176 PKGAMLT 182
P+GA+L+
Sbjct: 329 PRGAILS 335
>sp|P40341|YTA12_YEAST Mitochondrial respiratory chain complexes assembly protein YTA12
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YTA12 PE=1 SV=2
Length = 825
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/590 (56%), Positives = 422/590 (71%), Gaps = 23/590 (3%)
Query: 422 EITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPG--NSMD--GANFLWFNIGSVDSFER 477
EITW+DF +L KG V KL VVNK V+V L N D G NF +F IGS+DSFE
Sbjct: 205 EITWQDFREKLLAKGYVAKLIVVNKSMVKVMLNDNGKNQADNYGRNFYYFTIGSIDSFEH 264
Query: 478 NLELAQAQMHIDPANYLPVIYKTEIELS-SLSGILPTLLIIG------RRG--------G 522
L+ AQ ++ ID +PV+Y E + ++ ILPT+L+I RR G
Sbjct: 265 KLQKAQDELDIDKDFRIPVLYVQEGNWAKAMFQILPTVLMIAGIIWLTRRSAQAAGGSRG 324
Query: 523 GLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGA 582
G+FG K +D+ ++FKDVAGC+EAK EIMEFV+FLK P +Y +GAKIP+GA
Sbjct: 325 GIFGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGA 384
Query: 583 MLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCIL 642
+L+GPPGTGKTLLAKATAGEA VPF VSGSEF+EMFVGVG +RVRD+F AR++AP I+
Sbjct: 385 ILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIV 444
Query: 643 FIDEIDAVGRKRGGRNF-GGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKAL 701
FIDEIDA+G+ R NF G + E+ENTLNQ+LVEMDGF +VVVLA TNR D+LDKAL
Sbjct: 445 FIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKAL 504
Query: 702 LRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVC 761
LRPGRFDR I + P+++GR +IF VHL LK + DL +LAALTPGF+GADIANVC
Sbjct: 505 LRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVC 564
Query: 762 NEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFL 821
NEAALIAAR + + HFEQAIERV+ G+E+K+ +L PEEKK VAYHEAGHAV GW+L
Sbjct: 565 NEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYL 624
Query: 822 RYADPLLKVSIIPRGKG-LGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITT 880
+YADPLLKVSIIPRG+G LGYAQYLP + +L +++QL DRM M+LGGRVSEE+ F +T+
Sbjct: 625 KYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQLKDRMTMSLGGRVSEELHFPSVTS 684
Query: 881 GAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSL 940
GA DD KKVT A A V GM++K+G V++ + L KP+S+ T +ID+EV +
Sbjct: 685 GASDDFKKVTSMATAMVTELGMSDKIGWVNYQKRDDSD--LTKPFSDETGDIIDSEVYRI 742
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKS 990
+ + R LL E VEK+A+ LLKKE+L R DMI+LLG RPFPE++
Sbjct: 743 VQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGKRPFPERN 792
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 115/187 (61%), Gaps = 16/187 (8%)
Query: 8 EITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPG--NSMD--GANFLWFNIGSVDSFER 63
EITW+DF +L KG V KL VVNK V+V L N D G NF +F IGS+DSFE
Sbjct: 205 EITWQDFREKLLAKGYVAKLIVVNKSMVKVMLNDNGKNQADNYGRNFYYFTIGSIDSFEH 264
Query: 64 NLELAQAQMHIDPANYLPVIYKTEIELS-SLSGILPTLLIIG-------RSAEMMGGRPG 115
L+ AQ ++ ID +PV+Y E + ++ ILPT+L+I RSA+ GG G
Sbjct: 265 KLQKAQDELDIDKDFRIPVLYVQEGNWAKAMFQILPTVLMIAGIIWLTRRSAQAAGGSRG 324
Query: 116 RRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKI 175
G+FG K +D+ ++FKDVAGC+EAK EIMEFV+FLK P +Y +GAKI
Sbjct: 325 ----GIFGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKI 380
Query: 176 PKGAMLT 182
P+GA+L+
Sbjct: 381 PRGAILS 387
>sp|Q8S2A7|FTSH3_ORYSJ ATP-dependent zinc metalloprotease FTSH 3, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH3 PE=3 SV=1
Length = 802
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/632 (53%), Positives = 440/632 (69%), Gaps = 49/632 (7%)
Query: 421 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKL--------------------LPGNSMD 460
+EI++++F N +L G+V+ + V NK +V + LPG
Sbjct: 154 QEISFQEFKNKLLEPGLVDHIVVSNKSIAKVYVRSSPSIDRIQDSDIHITTSHLPGIESP 213
Query: 461 GANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE-LSSLSGILPTLLIIG- 518
+ +FNIGSVDSFE L+ AQ + IDP Y+P+ Y TE + + +PT+LIIG
Sbjct: 214 SSYKYYFNIGSVDSFEEKLQEAQKALEIDPHYYVPITYTTEAKWFEEVMKYVPTVLIIGL 273
Query: 519 ------RRGGG-------------LFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIM 559
R G +F KL +S V FKDVAGC+EAK EIM
Sbjct: 274 IYLLGKRIQNGFTVGGGPGKGGRSIFSIGKVQVTKLDKNSKNKVFFKDVAGCDEAKQEIM 333
Query: 560 EFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMF 619
EFV+FLKNP++Y +LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMF
Sbjct: 334 EFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMF 393
Query: 620 VGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNF-GGHSEQENTLNQLLVEMDG 678
VGVGPSRVR++F AR+ +P I+FIDEIDA+GR RG F GGH E+E+TLNQLLVEMDG
Sbjct: 394 VGVGPSRVRNLFQEARQCSPSIVFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVEMDG 453
Query: 679 FNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDR 738
F TT+ VVVLA TNR D+LDKALLRPGRFDRQI + PDIKGR IF+++LK LK D +
Sbjct: 454 FGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLDKEP 513
Query: 739 DDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNV 798
S++LAALTPGF GADIANVCNEAALIAAR T I M+HFE AI+RV+ G+EKK V
Sbjct: 514 SFYSQRLAALTPGFAGADIANVCNEAALIAARSEGTLITMQHFESAIDRVIGGLEKKNKV 573
Query: 799 LQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGK-GLGYAQYLPREQYLYSKEQL 857
+ E++TVAYHE+GHAVAGWFL +A+PLLKV+I+PRG LG+AQY+P + L +KEQL
Sbjct: 574 ISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDNLLMTKEQL 633
Query: 858 LDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPG 917
D CMTLGGR +EE+ G+I+TGA++DL+KVT+ YAQVA +G +EKVG +SF + G
Sbjct: 634 FDMTCMTLGGRAAEEVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDG 693
Query: 918 EMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDM 977
+ KPYS TA +ID EVR ++ AY +T L+ +HK V ++AE LL+KE+L ++D+
Sbjct: 694 -FEMSKPYSSQTASIIDTEVREWVAKAYEKTVELIKQHKDQVAQIAELLLEKEVLHQDDL 752
Query: 978 IELLGTRPFP--EKSTYEEFVEGTGSFEEDTS 1007
+++LG RPF E + Y+ F +G F+++ S
Sbjct: 753 VQVLGERPFKTLEPTNYDRFKQG---FQDEDS 781
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 115/207 (55%), Gaps = 32/207 (15%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKL--------------------LPGNSMD 46
+EI++++F N +L G+V+ + V NK +V + LPG
Sbjct: 154 QEISFQEFKNKLLEPGLVDHIVVSNKSIAKVYVRSSPSIDRIQDSDIHITTSHLPGIESP 213
Query: 47 GANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE-LSSLSGILPTLLIIGR 105
+ +FNIGSVDSFE L+ AQ + IDP Y+P+ Y TE + + +PT+LIIG
Sbjct: 214 SSYKYYFNIGSVDSFEEKLQEAQKALEIDPHYYVPITYTTEAKWFEEVMKYVPTVLIIGL 273
Query: 106 SAEMMGGR----------PGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEI 155
++G R PG+ G +F KL +S V FKDVAGC+EAK EI
Sbjct: 274 -IYLLGKRIQNGFTVGGGPGKGGRSIFSIGKVQVTKLDKNSKNKVFFKDVAGCDEAKQEI 332
Query: 156 MEFVNFLKNPQQYIDLGAKIPKGAMLT 182
MEFV+FLKNP++Y +LGAKIPKGA+L
Sbjct: 333 MEFVHFLKNPKKYEELGAKIPKGALLV 359
>sp|Q0DHL4|FTSH8_ORYSJ ATP-dependent zinc metalloprotease FTSH 8, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH8 PE=3 SV=1
Length = 822
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/761 (47%), Positives = 479/761 (62%), Gaps = 71/761 (9%)
Query: 306 GGGKWRIILSENVPKGFEKFYPDKNKKSAEKPKEEGKPSDSTQPPLSKPDLSSSRSGSSP 365
G WR IL+ P+ F + + D +KK+ E +GK +K D S
Sbjct: 76 AGTDWRSILAN--PQ-FRRLFSDGSKKNYENYYPKGKKEAPKGDGSNKSDSKQDSSTDDQ 132
Query: 366 WNMGVFGGGGGKGGQGSGGKGFGDFSGGDKEKYFMYGLIGSVAVLAAAVMYEMNYKEITW 425
WN Q + K +F + L+ +L++ + KEI++
Sbjct: 133 WNF-----------QETASKQLQNF---------LAPLLFLGLMLSSLSSSSSDQKEISF 172
Query: 426 KDFINNVLTKGIVEKLEVVNKKW--VRVKLLPGNSMDGANF------------------- 464
++F N +L G+V+++ V NK V V+ P ++ G N
Sbjct: 173 QEFKNKLLEPGLVDRIVVSNKSVAKVYVRSSPQSNSQGQNTDAIITTNDVPSKHTPSRYK 232
Query: 465 LWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE-LSSLSGILPTLLIIG----- 518
+FNIGSVDSFE LE AQ + +DP +++PV Y E+ + PT+ ++G
Sbjct: 233 YYFNIGSVDSFEEKLEEAQEALGVDPHDFVPVTYVAEVNWFQEVMRFAPTVFLVGLIYLM 292
Query: 519 --RRGGG-------------LFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVN 563
R G +F K+ +S V FKDVAGC+EAK EIMEFV+
Sbjct: 293 SKRMQSGFNIGGGPGKGGRGIFNIGKAQVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVH 352
Query: 564 FLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVG 623
FLKNP++Y +LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVG
Sbjct: 353 FLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVG 412
Query: 624 PSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG-HSEQENTLNQLLVEMDGFNTT 682
PSRVR++F AR+ AP I+FIDEIDA+GR RG F G + E+E+TLNQLLVEMDGF TT
Sbjct: 413 PSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTT 472
Query: 683 TNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLS 742
+ VVVLA TNR D+LDKALLRPGRFDRQI + PDIKGR IF+++LK LK D + S
Sbjct: 473 SGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYS 532
Query: 743 RKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPE 802
++LAALTPGF GADIANVCNEAALIAAR T I M+HFE AI+R++ G+EKK V+
Sbjct: 533 QRLAALTPGFAGADIANVCNEAALIAARSEETQITMQHFESAIDRIIGGLEKKNKVISKL 592
Query: 803 EKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGK-GLGYAQYLPREQYLYSKEQLLDRM 861
E++TVAYHE+GHAVAGWFL +A+PLLKV+I+PRG LG+AQY+P E L +KEQL D
Sbjct: 593 ERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMT 652
Query: 862 CMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL 921
CMTLGGR +EE+ GRI+TGA++DL+KVT+ YAQVA +G +EKVG +SF G +
Sbjct: 653 CMTLGGRAAEEVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRDDG-FEM 711
Query: 922 EKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
KPYS TA +ID+EVR + AY +T L+ EHK V K+AE LL+KE+L ++D++ +L
Sbjct: 712 TKPYSNQTASIIDDEVREWVGKAYKKTVELITEHKEQVAKIAEMLLEKEVLHQDDLVRVL 771
Query: 982 GTRPF--PEKSTYEEFVEGTGSFEEDTSLPEGLKDWNKDKE 1020
G RPF E + Y+ F +G EED+ E K D +
Sbjct: 772 GERPFKASEPTNYDLFKQGFQD-EEDSKNQEAAKTPQPDDD 811
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 116/208 (55%), Gaps = 31/208 (14%)
Query: 5 NYKEITWKDFINNVLTKGIVEKLEVVNKKW--VRVKLLPGNSMDGANF------------ 50
+ KEI++++F N +L G+V+++ V NK V V+ P ++ G N
Sbjct: 166 DQKEISFQEFKNKLLEPGLVDRIVVSNKSVAKVYVRSSPQSNSQGQNTDAIITTNDVPSK 225
Query: 51 -------LWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE-LSSLSGILPTLLI 102
+FNIGSVDSFE LE AQ + +DP +++PV Y E+ + PT+ +
Sbjct: 226 HTPSRYKYYFNIGSVDSFEEKLEEAQEALGVDPHDFVPVTYVAEVNWFQEVMRFAPTVFL 285
Query: 103 IG----RSAEMMGG-----RPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKV 153
+G S M G PG+ G G+F K+ +S V FKDVAGC+EAK
Sbjct: 286 VGLIYLMSKRMQSGFNIGGGPGKGGRGIFNIGKAQVTKMDKNSKNKVFFKDVAGCDEAKQ 345
Query: 154 EIMEFVNFLKNPQQYIDLGAKIPKGAML 181
EIMEFV+FLKNP++Y +LGAKIPKGA+L
Sbjct: 346 EIMEFVHFLKNPKKYEELGAKIPKGALL 373
>sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial
OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1
Length = 813
Score = 627 bits (1618), Expect = e-178, Method: Compositional matrix adjust.
Identities = 351/737 (47%), Positives = 466/737 (63%), Gaps = 84/737 (11%)
Query: 309 KWRIILSENVPK--GFEKFYPDKNKKSAEKPKEEGKPSDSTQPPLSKPDLSSSRSGSSPW 366
+ R S PK +E +YP +KK+ PK E K S SR GS
Sbjct: 81 RLRRFFSSQTPKKKNYENYYPKDSKKA---PKNEQK--------------SESRDGSK-- 121
Query: 367 NMGVFGGGGGKGGQGSGGKGFGDFSGGDKEKYFMYGLIGSVAVLAAAVMYEMNYKEITWK 426
K + G F + + + + L+ +L+ + ++I+++
Sbjct: 122 ----------KNENENAGDAFSN-----EYQNMLIPLMAIALILSTFSLGSREQQQISFQ 166
Query: 427 DFINNVLTKGIVEKLEVVNKKWVRVKL-------------------LPGNSMDGANFLWF 467
+F N +L G+V+ ++V NK+ +V + +P G +F
Sbjct: 167 EFKNKLLEAGLVDHIDVSNKEVAKVYVRSSPKSQTTEEVVQGPGNGVPAKGRGGQYKYYF 226
Query: 468 NIGSVDSFERNLELAQAQMHIDPANYLPVIYKTE-IELSSLSGILPTLLIIG------RR 520
NIGSV+SFE LE AQ + ++ +++PV Y +E I L PTLL++ RR
Sbjct: 227 NIGSVESFEEKLEEAQEAIGVNSHDFVPVTYVSETIWYQELLRFAPTLLLVATLIFGARR 286
Query: 521 ---------------GGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFL 565
G G+F + +S + FKDVAGCEEAK EIMEFV+FL
Sbjct: 287 MQGGLGGLGGPGGKAGRGIFNIGKAQITRADKNSKNKIYFKDVAGCEEAKQEIMEFVHFL 346
Query: 566 KNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPS 625
+NP++Y DLGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVGPS
Sbjct: 347 QNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPS 406
Query: 626 RVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNF-GGHSEQENTLNQLLVEMDGFNTTTN 684
RVR++F AR+ AP I+FIDEIDA+GR RG F GG+ E+E+TLNQLLVEMDGF TT
Sbjct: 407 RVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAG 466
Query: 685 VVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRK 744
VVVLA TNR D+LDKALLRPGRFDRQI + PDIKGR IF+++LK +K D + S++
Sbjct: 467 VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQR 526
Query: 745 LAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEK 804
LAALTPGF GADIANVCNEAALIAAR T+ M HF+ AI+RV+ G+EKK V+ E+
Sbjct: 527 LAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNRVISKLER 586
Query: 805 KTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGK-GLGYAQYLPREQYLYSKEQLLDRMCM 863
+TVAYHE+GHAVAGWFL +A+PLLKV+I+PRG LG+AQY+P E L +KEQL D CM
Sbjct: 587 RTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCM 646
Query: 864 TLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEK 923
TLGGR +E++ GRI+TGA++DL+KVT+ YAQVA +G ++K+G +SF PQ E K
Sbjct: 647 TLGGRAAEQVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSF--PQR-EDEFSK 703
Query: 924 PYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGT 983
PYS T +ID EVR + AY RT L+ EHK V ++AE LL+KE+L ++D+ ++LG
Sbjct: 704 PYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKVLGE 763
Query: 984 RPFP--EKSTYEEFVEG 998
RPF E + Y+ F G
Sbjct: 764 RPFKSGETTNYDRFKSG 780
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 113/208 (54%), Gaps = 34/208 (16%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKL-------------------LPGNSMDG 47
++I++++F N +L G+V+ ++V NK+ +V + +P G
Sbjct: 161 QQISFQEFKNKLLEAGLVDHIDVSNKEVAKVYVRSSPKSQTTEEVVQGPGNGVPAKGRGG 220
Query: 48 ANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTE-IELSSLSGILPTLLIIGRS 106
+FNIGSV+SFE LE AQ + ++ +++PV Y +E I L PTLL++ +
Sbjct: 221 QYKYYFNIGSVESFEEKLEEAQEAIGVNSHDFVPVTYVSETIWYQELLRFAPTLLLV--A 278
Query: 107 AEMMGGR------------PGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVE 154
+ G R G+ G G+F + +S + FKDVAGCEEAK E
Sbjct: 279 TLIFGARRMQGGLGGLGGPGGKAGRGIFNIGKAQITRADKNSKNKIYFKDVAGCEEAKQE 338
Query: 155 IMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
IMEFV+FL+NP++Y DLGAKIPKGA+L
Sbjct: 339 IMEFVHFLQNPKKYEDLGAKIPKGALLV 366
>sp|P39925|AFG3_YEAST Mitochondrial respiratory chain complexes assembly protein AFG3
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=AFG3 PE=1 SV=1
Length = 761
Score = 624 bits (1610), Expect = e-178, Method: Compositional matrix adjust.
Identities = 341/613 (55%), Positives = 427/613 (69%), Gaps = 52/613 (8%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELA 482
+T++DF L KG+V K+ VVNK V +L+ + + F IGSVD FE ++
Sbjct: 148 LTFQDFKTKYLEKGLVSKIYVVNKFLVEAELV-----NTKQVVSFTIGSVDIFEEQMDQI 202
Query: 483 QAQMHIDPANYLPVIYKTEIELSS----LSGILPTLLIIGRRGGGLFG------------ 526
Q ++I P + +P+ Y IE SS L LPT++++G GL+
Sbjct: 203 QDLLNIPPRDRIPIKY---IERSSPFTFLFPFLPTIILLG----GLYFITRKINSSPPNA 255
Query: 527 ------------GVMESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYID 573
V +S AKL N +DI + FK+VAGC+EAK EIMEFV+FLKNP +Y
Sbjct: 256 NGGGGGGLGGMFNVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTK 315
Query: 574 LGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSM 633
LGAKIP+GA+L+GPPGTGKTLLAKATAGEANVPF++VSGSEF+EMFVGVG SRVRD+F+
Sbjct: 316 LGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQ 375
Query: 634 ARKHAPCILFIDEIDAVGRKR--GGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAAT 691
AR AP I+FIDEIDA+G++R GG G + E+E TLNQLLVEMDGF T+ VVVLA T
Sbjct: 376 ARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGT 435
Query: 692 NRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLK-----PLKTDLDRDDLSRKLA 746
NR DVLD AL+RPGRFDR I + +PD+ GR I+ VHLK PL TD D ++LS KLA
Sbjct: 436 NRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTD-DMNNLSGKLA 494
Query: 747 ALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKT 806
LTPGFTGADIAN CNEAALIAAR I + HFEQAIERV+AG+EKKT VL EEK++
Sbjct: 495 TLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRS 554
Query: 807 VAYHEAGHAVAGWFLRYADPLLKVSIIPRGKG-LGYAQYLPREQYLYSKEQLLDRMCMTL 865
VAYHEAGHAV GWFL+YADPLLKVSIIPRG+G LGYAQYLP +QYL S+EQ RM M L
Sbjct: 555 VAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQFRHRMIMAL 614
Query: 866 GGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPY 925
GGRVSEE+ F +T+GA DD KKVTQ A A V GM+ K+G +SFD G + KP+
Sbjct: 615 GGRVSEELHFPSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQ-NDGNFKVNKPF 673
Query: 926 SESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRP 985
S TA+ ID EV+S++ +A+ LL ++ V+ VA+ LL+KE + R DMI LLG RP
Sbjct: 674 SNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLLGPRP 733
Query: 986 FPEKS-TYEEFVE 997
F E++ +E++++
Sbjct: 734 FKERNEAFEKYLD 746
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 109/188 (57%), Gaps = 22/188 (11%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELA 68
+T++DF L KG+V K+ VVNK V +L+ + + F IGSVD FE ++
Sbjct: 148 LTFQDFKTKYLEKGLVSKIYVVNKFLVEAELV-----NTKQVVSFTIGSVDIFEEQMDQI 202
Query: 69 QAQMHIDPANYLPVIYKTEIELSS----LSGILPTLLIIG---------RSAEMMGGRPG 115
Q ++I P + +P+ Y IE SS L LPT++++G S+ G
Sbjct: 203 QDLLNIPPRDRIPIKY---IERSSPFTFLFPFLPTIILLGGLYFITRKINSSPPNANGGG 259
Query: 116 RRGGGLFGGVMESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
G G V +S AKL N +DI + FK+VAGC+EAK EIMEFV+FLKNP +Y LGAK
Sbjct: 260 GGGLGGMFNVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAK 319
Query: 175 IPKGAMLT 182
IP+GA+L+
Sbjct: 320 IPRGAILS 327
>sp|Q84WU8|FTSH3_ARATH ATP-dependent zinc metalloprotease FTSH 3, mitochondrial
OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1
Length = 809
Score = 616 bits (1589), Expect = e-175, Method: Compositional matrix adjust.
Identities = 334/650 (51%), Positives = 437/650 (67%), Gaps = 50/650 (7%)
Query: 407 VAVLAAAVMYEM------NYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKL------- 453
+ +LA AV + ++I++++F N +L G+V+ ++V NK +V +
Sbjct: 137 IPLLALAVFFSTFSFGSGEQQQISFQEFKNKLLEPGLVDHIDVSNKSVAKVYVRSTPKDQ 196
Query: 454 ------------LPGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTE 501
+P G +FNIGSVDSFE LE AQ + +D Y+PV Y +E
Sbjct: 197 QTTDVVHGNGNGIPAKRTGGQYKYYFNIGSVDSFEEKLEEAQEALGVDRHEYVPVTYVSE 256
Query: 502 -IELSSLSGILPTLLIIG------RR--------------GGGLFGGVMESTAKLINSSD 540
+ PTLL++G RR G G+F + + S
Sbjct: 257 MVWYQEFMRFAPTLLLLGTLIYGARRMQGGLGVGGTGGKNGRGIFNIGKATITRADKHSK 316
Query: 541 IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATA 600
+ FKDVAGC+EAK EIMEFV+FLKNP++Y DLGAKIPKGA+L GPPGTGKTLLAKATA
Sbjct: 317 NKIYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATA 376
Query: 601 GEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG 660
GE+ VPF+++SGS+F+EMFVGVGPSRVR +F AR+ AP I+FIDEIDA+GR RG G
Sbjct: 377 GESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLG 436
Query: 661 GHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKG 720
G+ E+E+TLNQLLVEMDGF TT VVVLA TNR D+LDKALLRPGRFDRQI + PDIKG
Sbjct: 437 GNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 496
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
R IFK++LK +K D + S++LAALTPGF GADIANVCNEAALIAAR T+ M H
Sbjct: 497 RDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAH 556
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGK-GL 839
FE AI+RV+ G+EKK V+ E++TVAYHE+GHAV GWFL +A+PLLKV+I+PRG L
Sbjct: 557 FESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAAL 616
Query: 840 GYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAH 899
G+AQY+P E L +KEQL D CMTLGGR +E++ G+I+TGA++DL+KVT+ YAQVA
Sbjct: 617 GFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQVAV 676
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
+G ++KVG +SF P+ KPYS T +ID EVR ++ AY RT L+ EHK V
Sbjct: 677 YGFSDKVGLLSFP-PRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERTVELVEEHKVKV 735
Query: 960 EKVAERLLKKEILDRNDMIELLGTRPF--PEKSTYEEFVEGTGSFEEDTS 1007
++AE LL+KE+L ++D++++LG RPF E + Y+ F G E+D++
Sbjct: 736 AEIAELLLEKEVLHQDDLLKILGERPFKSAEVTNYDRFKSGFEETEKDSA 785
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 33/207 (15%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKL-------------------LPGNSMDG 47
++I++++F N +L G+V+ ++V NK +V + +P G
Sbjct: 157 QQISFQEFKNKLLEPGLVDHIDVSNKSVAKVYVRSTPKDQQTTDVVHGNGNGIPAKRTGG 216
Query: 48 ANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTE-IELSSLSGILPTLLIIGRS 106
+FNIGSVDSFE LE AQ + +D Y+PV Y +E + PTLL++G
Sbjct: 217 QYKYYFNIGSVDSFEEKLEEAQEALGVDRHEYVPVTYVSEMVWYQEFMRFAPTLLLLG-- 274
Query: 107 AEMMGGRPGRRGGGLFGGVMESTAKLIN-----------SSDIGVRFKDVAGCEEAKVEI 155
+ G R + G G+ G ++ + N S + FKDVAGC+EAK EI
Sbjct: 275 TLIYGARRMQGGLGVGGTGGKNGRGIFNIGKATITRADKHSKNKIYFKDVAGCDEAKQEI 334
Query: 156 MEFVNFLKNPQQYIDLGAKIPKGAMLT 182
MEFV+FLKNP++Y DLGAKIPKGA+L
Sbjct: 335 MEFVHFLKNPKKYEDLGAKIPKGALLV 361
>sp|D0MGU8|FTSH_RHOM4 ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=ftsH PE=3 SV=1
Length = 697
Score = 555 bits (1431), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/451 (60%), Positives = 345/451 (76%), Gaps = 6/451 (1%)
Query: 540 DIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKAT 599
D V FKDVAG +EAK E+ E V FLKNP+++ LG K+PKG +L GPPGTGKTLLAKA
Sbjct: 205 DHRVTFKDVAGLDEAKEEVAEIVEFLKNPKKFTRLGGKLPKGVLLVGPPGTGKTLLAKAV 264
Query: 600 AGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG-GRN 658
AGEA VPF ++SGS+F+EMFVGVG +RVRD+F A++ APCI+FIDEIDA+GR RG G
Sbjct: 265 AGEAGVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAIGRSRGRGIM 324
Query: 659 FGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDI 718
G + E+ENTLNQLLVEMDGFNT V+++AATNR DVLD ALLRPGRFDRQI + PD
Sbjct: 325 MGANDERENTLNQLLVEMDGFNTDKGVIIMAATNRPDVLDPALLRPGRFDRQILIDKPDR 384
Query: 719 KGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVM 778
+ R IFKVH + L D D LA TPGF GA+IANVCNEAAL+AAR + M
Sbjct: 385 RERLEIFKVHTRDLILGDDVD--LEVLAGQTPGFAGAEIANVCNEAALLAARKGKEAVEM 442
Query: 779 KHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRG-K 837
+ FEQAI+RV+AG+EKK ++ PEE++ VAYHEAGHA+ GWFLRY DP++KVSI+PRG
Sbjct: 443 EDFEQAIDRVIAGLEKKNKIISPEEREIVAYHEAGHAIVGWFLRYTDPVVKVSIVPRGLA 502
Query: 838 GLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQV 897
LGYAQYLP E+YLY+KE LLDRM M +GGRV+EE+ FGRI+TGA++DL+++T+ AYA V
Sbjct: 503 ALGYAQYLPEERYLYTKEALLDRMTMAIGGRVAEELVFGRISTGAQNDLERITRMAYAMV 562
Query: 898 AHFGMNEKVGNVSFDMP-QPGEMV-LEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEH 955
+GM+E+VG VSF++ Q GE +KPYSE TA+LID EVR +I+ R + +L E
Sbjct: 563 VDYGMSERVGYVSFNLSGQYGEQAFFDKPYSEETARLIDEEVRRIINEVRERARRILEEK 622
Query: 956 KASVEKVAERLLKKEILDRNDMIELLGTRPF 986
+ +E +A RLL+KE+L D++E+LG RP+
Sbjct: 623 RDKLEALARRLLEKEVLGPRDLVEILGPRPY 653
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 137 DIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
D V FKDVAG +EAK E+ E V FLKNP+++ LG K+PKG +L
Sbjct: 205 DHRVTFKDVAGLDEAKEEVAEIVEFLKNPKKFTRLGGKLPKGVLLV 250
>sp|Q3ULF4|SPG7_MOUSE Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1
Length = 781
Score = 528 bits (1360), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/587 (46%), Positives = 393/587 (66%), Gaps = 24/587 (4%)
Query: 423 ITWKDFINNVLTKGIVEKLEVV-NKKWVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 477
I+W DF+N +L KG V++++VV V V L PG + G A + ++D FE
Sbjct: 165 ISWADFVNEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 478 NLELAQAQMHIDPANYLPVIYK--------------TEIELSSLSGILPTLLIIGRRGG- 522
L A+ +++I+ + +PV YK T + L+ L + + GR GG
Sbjct: 225 KLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGF 284
Query: 523 GLFGGVMESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 581
F + + +++ + GV F+DVAG EAK+E+ EFV++LK+P++++ LGAK+PKG
Sbjct: 285 SAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKG 344
Query: 582 AMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCI 641
A+L GPPG GKTLLAKA A EA VPF+ ++G EF+E+ G+G +RVR +F AR APCI
Sbjct: 345 ALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCI 404
Query: 642 LFIDEIDAVGRKRGGRNFG-GHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKA 700
++IDEIDAVG+KR G ++E+E TLNQLLVEMDG TT +V+VLA+TNR DVLD A
Sbjct: 405 VYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNA 464
Query: 701 LLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANV 760
L+RPGR DR +F+ P ++ R IF+ HLK LK S++LA LTPGF+GADIAN+
Sbjct: 465 LMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANI 524
Query: 761 CNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWF 820
CNEAAL AAR+ HT++ +FE A+ERV+AG KK+ +L EE++ VA+HE+GHA+ GW
Sbjct: 525 CNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWL 584
Query: 821 LRYADPLLKVSIIPR-GKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRIT 879
L + + ++KVSI PR LG++Q LPR+QYL++KEQL +RMCM LGGR +E I F R+T
Sbjct: 585 LEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLFERMCMALGGRAAEAISFSRVT 644
Query: 880 TGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEM-VLEKPYSESTAQLIDNEVR 938
+GA+DDL+KVT+ AY+ V FGM +G VSF Q G M + +P+S+ Q++D+E +
Sbjct: 645 SGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGLMGIGRRPFSQGLQQMMDHEAK 704
Query: 939 SLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRP 985
L++ AY T+ +L+++ ++ +A LL+KE+++ D+ L+G P
Sbjct: 705 LLVAKAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEALIGPPP 751
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 12/184 (6%)
Query: 9 ITWKDFINNVLTKGIVEKLEVV-NKKWVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 63
I+W DF+N +L KG V++++VV V V L PG + G A + ++D FE
Sbjct: 165 ISWADFVNEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 64 NLELAQAQMHIDPANYLPVIYKTE----IELSSLSGILPTLLIIGRSAEMMGGRPGRRGG 119
L A+ +++I+ + +PV YK L +L G+ L I + G GR GG
Sbjct: 225 KLRAAEDELNIESKDRIPVSYKRTGFFGNALYAL-GMTAVGLAILWYVFRLAGMTGREGG 283
Query: 120 -GLFGGVMESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPK 177
F + + +++ + GV F+DVAG EAK+E+ EFV++LK+P++++ LGAK+PK
Sbjct: 284 FSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPK 343
Query: 178 GAML 181
GA+L
Sbjct: 344 GALL 347
>sp|A6LD25|FTSH_PARD8 ATP-dependent zinc metalloprotease FtsH OS=Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
GN=ftsH PE=3 SV=1
Length = 684
Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust.
Identities = 288/619 (46%), Positives = 396/619 (63%), Gaps = 30/619 (4%)
Query: 398 YFMYGLIGSVAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWV-------- 449
Y+MYGLI + V KE+ W +F + + + +K+ V NKK +
Sbjct: 25 YWMYGLIFIMLVALYMTNDSSGTKELGWTEF-QKLAQENVFDKMTVYNKKNLVEATVKNG 83
Query: 450 RVKLLPGNSMDGANF-----LWFNIGSVDSFERNLELAQAQMHIDPANYLP----VIYKT 500
+ + + GN MD + ++ I S D F + A A HID I+
Sbjct: 84 KTEQVFGN-MDVSKIGVSPKVYVKIPSADKFSDFYDKAVADSHIDTQVRFEEGDDAIWNF 142
Query: 501 EIELSSLSGILPTLLIIGRRGGGLFG-------GVMESTAKLIN-SSDIGVRFKDVAGCE 552
+ + ++ + + RR G G V ++ A+L + +D V FKDVAG
Sbjct: 143 LVSFGPIILLIGVWMFLMRRMSGGTGAGPGGVFSVGKAKAQLFDKDNDRKVTFKDVAGLA 202
Query: 553 EAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSG 612
EAK E+ E V+FLKNP++Y +LG KIPKGA+L GPPGTGKTLLAKA AGEANVPF ++SG
Sbjct: 203 EAKQEVEEIVSFLKNPEKYTELGGKIPKGALLVGPPGTGKTLLAKAVAGEANVPFFSLSG 262
Query: 613 SEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG-GRNFGGHSEQENTLNQ 671
S+F+EMFVGVG SRVRD+F A++ +PCI+FIDEIDAVGR RG N + E+ENTLNQ
Sbjct: 263 SDFVEMFVGVGASRVRDLFRQAKEKSPCIVFIDEIDAVGRARGKNANMNSNDERENTLNQ 322
Query: 672 LLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKP 731
LL EMDGF + + V++LAATNR D+LDKALLR GRFDRQI V PD+ R IF VHL+P
Sbjct: 323 LLTEMDGFGSNSGVIILAATNRADILDKALLRAGRFDRQIHVELPDLNERKEIFGVHLRP 382
Query: 732 LKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAG 791
+K D D + LA TPGF+GADIANVCNEAALIAAR+ + + F A++R+V G
Sbjct: 383 IKIDESVD--AEFLARQTPGFSGADIANVCNEAALIAARNGKKFVQKEDFMNAVDRIVGG 440
Query: 792 MEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQYLPREQYL 851
+EK++ + EE+K +A HEAGHA W L +A+PL+KV+I+PRGK LG A YLP E+ +
Sbjct: 441 LEKRSKITTEEERKCIANHEAGHATLSWLLEHANPLVKVTIVPRGKALGAAWYLPEERQI 500
Query: 852 YSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF 911
++EQL D MC TLGGR +EE+ G+I+TGA +DL++VT+ AYA V +FGM++K+ N+++
Sbjct: 501 TTREQLQDEMCATLGGRAAEELVLGKISTGASNDLERVTKQAYAMVVYFGMSDKLPNLNY 560
Query: 912 DMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEI 971
+ KPYSE TA+LID EV+ +I+ Y R K +L E+K K+A+ LL +E+
Sbjct: 561 YDSTGQDWGFTKPYSEETAKLIDTEVQKIINEQYDRAKRILSENKEGHSKLAQVLLDREV 620
Query: 972 LDRNDMIELLGTRPFPEKS 990
+ D+ + G R + +S
Sbjct: 621 IYSEDVEHIFGKRAWISRS 639
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 38/201 (18%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWV--------RVKLLPGNSMDGANF-----LWF 53
KE+ W +F + + + +K+ V NKK + + + + GN MD + ++
Sbjct: 48 KELGWTEF-QKLAQENVFDKMTVYNKKNLVEATVKNGKTEQVFGN-MDVSKIGVSPKVYV 105
Query: 54 NIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIELSS--------LSGILPTLLIIGR 105
I S D F + A A HID T++ L P +L+IG
Sbjct: 106 KIPSADKFSDFYDKAVADSHID----------TQVRFEEGDDAIWNFLVSFGPIILLIGV 155
Query: 106 SAEMM---GGRPGRRGGGLFGGVMESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNF 161
+M G G GG+F V ++ A+L + +D V FKDVAG EAK E+ E V+F
Sbjct: 156 WMFLMRRMSGGTGAGPGGVFS-VGKAKAQLFDKDNDRKVTFKDVAGLAEAKQEVEEIVSF 214
Query: 162 LKNPQQYIDLGAKIPKGAMLT 182
LKNP++Y +LG KIPKGA+L
Sbjct: 215 LKNPEKYTELGGKIPKGALLV 235
>sp|Q9UQ90|SPG7_HUMAN Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2
Length = 795
Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/587 (45%), Positives = 390/587 (66%), Gaps = 24/587 (4%)
Query: 423 ITWKDFINNVLTKGIVEKLEVV-NKKWVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 477
I+W DF++ +L KG V++++VV V V L PG + G A + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 478 NLELAQAQMHIDPANYLPVIYK--------------TEIELSSLSGILPTLLIIGRRGG- 522
L A+ +++I+ + +PV YK T + L+ L + + GR GG
Sbjct: 225 KLRAAEDELNIEAKDRIPVSYKRTGFFGNALYSVGMTAVGLAILWYVFRLAGMTGREGGF 284
Query: 523 GLFGGVMESTAKLINSS-DIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 581
F + + +++ GV FKDVAG EAK+E+ EFV++LK+P++++ LGAK+PKG
Sbjct: 285 SAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKG 344
Query: 582 AMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCI 641
A+L GPPG GKTLLAKA A EA VPF+ ++G EF+E+ G+G +RVR +F AR APCI
Sbjct: 345 ALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCI 404
Query: 642 LFIDEIDAVGRKRGGRNFG-GHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKA 700
++IDEIDAVG+KR G ++E+E TLNQLLVEMDG TT +V+VLA+TNR D+LD A
Sbjct: 405 VYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGA 464
Query: 701 LLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANV 760
L+RPGR DR +F+ P ++ R IF+ HLK LK S++LA LTPGF+GADIAN+
Sbjct: 465 LMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANI 524
Query: 761 CNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWF 820
CNEAAL AAR+ HT++ +FE A+ERV+AG KK+ +L EE+K VA+HE+GHA+ GW
Sbjct: 525 CNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWM 584
Query: 821 LRYADPLLKVSIIPR-GKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRIT 879
L + + ++KVSI PR LG+AQ LPR+Q+L++KEQL +RMCM LGGR SE + F +T
Sbjct: 585 LEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQLFERMCMALGGRASEALSFNEVT 644
Query: 880 TGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEM-VLEKPYSESTAQLIDNEVR 938
+GA+DDL+KVT+ AY+ V FGM +G +SF Q G M + +P+S+ Q++D+E R
Sbjct: 645 SGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQEGLMGIGRRPFSQGLQQMMDHEAR 704
Query: 939 SLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRP 985
L++ AY T+ +L ++ ++ +A LL+KE+++ D+ L+G P
Sbjct: 705 LLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEALIGPPP 751
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 104/183 (56%), Gaps = 10/183 (5%)
Query: 9 ITWKDFINNVLTKGIVEKLEVV-NKKWVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 63
I+W DF++ +L KG V++++VV V V L PG + G A + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 64 NLELAQAQMHIDPANYLPVIYK-TEIELSSLS--GILPTLLIIGRSAEMMGGRPGRRGG- 119
L A+ +++I+ + +PV YK T ++L G+ L I + G GR GG
Sbjct: 225 KLRAAEDELNIEAKDRIPVSYKRTGFFGNALYSVGMTAVGLAILWYVFRLAGMTGREGGF 284
Query: 120 GLFGGVMESTAKLINSS-DIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 178
F + + +++ GV FKDVAG EAK+E+ EFV++LK+P++++ LGAK+PKG
Sbjct: 285 SAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKG 344
Query: 179 AML 181
A+L
Sbjct: 345 ALL 347
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/453 (55%), Positives = 332/453 (73%), Gaps = 13/453 (2%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A+L+ V F DVAG +E K E+ E V+FLK+P++Y++LGA+IPKG +L GPPG
Sbjct: 141 KSRARLVTDDRKRVTFDDVAGIDEVKEELAEIVDFLKHPKRYLELGARIPKGVLLYGPPG 200
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K++PCI+FIDEIDA
Sbjct: 201 TGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDA 260
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQLLVEMDGF+ ++++AATNR DVLD ALLRPGRFDR
Sbjct: 261 VGRQRGAGYGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRPDVLDPALLRPGRFDR 320
Query: 710 QIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
QI + PD+KGR +IF+VH KPL+ D+D + L+++ TPGFTGADIAN+ NEAAL+
Sbjct: 321 QIVIDRPDLKGRLAIFQVHAKGKPLEPDVDLEVLAKR----TPGFTGADIANLMNEAALL 376
Query: 768 AARDLHTTIVMKHFEQAIERVVA-GMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADP 826
AAR I M+ E AI+RV+A G EKK+ V+ +EK+ AYHEAGHAV G L + DP
Sbjct: 377 AARRRKKKISMQDVEDAIDRVLAGGPEKKSRVISEKEKRVTAYHEAGHAVVGHMLPHMDP 436
Query: 827 LLKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
L K++IIPRG+ +GY +LP E +Y SK ++LDRM M LGGR +EEI FG IT+GA+DD
Sbjct: 437 LHKITIIPRGRAMGYTLFLPVEDRYNISKSEILDRMTMALGGRAAEEITFGEITSGAQDD 496
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQ-----PGEMVLEKPYSESTAQLIDNEVRSL 940
+++ TQ A V +GM+EK+G +++ M Q +M + YSE A LID EVR
Sbjct: 497 IERTTQWARRMVTEWGMSEKLGPLTYGMKQDEVFLARDMTRLRNYSEEVAGLIDEEVRKF 556
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILD 973
+ AY R +L EH+ ++EKV+E LL+KE L+
Sbjct: 557 VHMAYQRAIDILTEHRDALEKVSEVLLEKETLE 589
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S A+L+ V F DVAG +E K E+ E V+FLK+P++Y++LGA+IPKG +L
Sbjct: 141 KSRARLVTDDRKRVTFDDVAGIDEVKEELAEIVDFLKHPKRYLELGARIPKGVLL 195
>sp|D5H7Z5|FTSH1_SALRM ATP-dependent zinc metalloprotease FtsH 1 OS=Salinibacter ruber
(strain M8) GN=ftsH1 PE=3 SV=1
Length = 686
Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/468 (52%), Positives = 334/468 (71%), Gaps = 8/468 (1%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F DVAG E K E+ E V FL+ PQ++ LG +P G +L GPPGTGKTLLAKA AGE
Sbjct: 214 VTFDDVAGLAEPKEEVAEVVEFLRRPQKFTRLGGALPTGVLLVGPPGTGKTLLAKAVAGE 273
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A VPF ++SGS+F+EMFVGVG SRVRD+F A++ APCI+FIDE+DA+GR RGG G
Sbjct: 274 AGVPFASISGSDFMEMFVGVGASRVRDLFDQAKERAPCIIFIDEVDAIGRTRGGPGGAGT 333
Query: 663 SEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E++NTLNQLLVEMDGF++ VV++AATNR DVLD ALLRPGRFDRQI + PD RA
Sbjct: 334 GERDNTLNQLLVEMDGFDSDEGVVIMAATNRPDVLDAALLRPGRFDRQISIHKPDRLERA 393
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
IF+VH+ L+ D D LA TPGF GA+IANVCNEAAL+AAR + M F+
Sbjct: 394 DIFRVHVADLRLDASVD--PEALARQTPGFAGAEIANVCNEAALLAARRGRNAVQMDDFD 451
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRG-KGLGY 841
QA++RV+AG+E+ ++ PEE++ +A+HE+GHA+ GWFL + DP++KVS++PRG LG+
Sbjct: 452 QALDRVMAGLERSNKLISPEERRVIAHHESGHAIVGWFLEHTDPVVKVSVVPRGLSALGH 511
Query: 842 AQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFG 901
AQ+LP+E+ LYS+E L+DRM M LGGR +EEI FGR TTGA+DDL++VT++AYA V +G
Sbjct: 512 AQHLPKERDLYSREALMDRMTMALGGRGAEEIVFGRATTGAKDDLERVTETAYAMVVDYG 571
Query: 902 MNEKVGNVSFDMPQ--PGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
M++++G +S++ + + EKPYS++ A ID EV ++ A R LL E + +
Sbjct: 572 MSDRIGPLSYNRAERRADGPLFEKPYSDAMAAAIDEEVADIVREARARANDLLREKRPLL 631
Query: 960 EKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEEDTS 1007
+++AERLL++E+L ++ LLG+ P E Y EG G+ S
Sbjct: 632 DEMAERLLREEVLGVEALVALLGSPPHGE---YAWLKEGDGTSRNSAS 676
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
V F DVAG E K E+ E V FL+ PQ++ LG +P G +L
Sbjct: 214 VTFDDVAGLAEPKEEVAEVVEFLRRPQKFTRLGGALPTGVLLV 256
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/497 (49%), Positives = 335/497 (67%), Gaps = 13/497 (2%)
Query: 521 GGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPK 580
GG +S AK++N +FKDVAG +E K E++E V FLK+P+++ +GA+IPK
Sbjct: 141 GGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIPK 200
Query: 581 GAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPC 640
G +L GPPGTGKTLLA+A AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K+APC
Sbjct: 201 GVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPC 260
Query: 641 ILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKA 700
I+FIDEIDAVGR+RG GGH E+E TLNQLLVEMDGF+ ++++AATNR D+LD A
Sbjct: 261 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPA 320
Query: 701 LLRPGRFDRQIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIA 758
LLRPGRFDRQI V PD+ GR + KVH KPL D++ + +A TPGF+GAD+
Sbjct: 321 LLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNL----KTIATRTPGFSGADLE 376
Query: 759 NVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAG 818
N+ NEAAL+AAR HT I M H E+AI+RV+AG KK+ V+ P+EKK VA+HEAGH V G
Sbjct: 377 NLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVVG 436
Query: 819 WFLRYADPLLKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGR 877
L AD + KV+I+PRG GYA LP+E +Y ++ +LLD++ LGGRV+EE+ FG
Sbjct: 437 VKLENADMVHKVTIVPRGMAGGYAVMLPKEDRYFMTQPELLDKIIGLLGGRVAEEVTFGE 496
Query: 878 ITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQ 931
++TGA +D ++ T A V +GM+EK+G + F G++ L E+ YS++ A
Sbjct: 497 VSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAH 556
Query: 932 LIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKST 991
ID EV+ +I Y R K +L+E+K S++ VA+ LL E LD + L+ P+
Sbjct: 557 EIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHEGKLPDDHH 616
Query: 992 YEEFVEGTGSFEEDTSL 1008
+E + E D +
Sbjct: 617 LNAHLEKEKASESDVKV 633
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 118 GGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPK 177
GG +S AK++N +FKDVAG +E K E++E V FLK+P+++ +GA+IPK
Sbjct: 141 GGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIPK 200
Query: 178 GAMLT 182
G +L
Sbjct: 201 GVLLV 205
>sp|D3F124|FTSH1_CONWI ATP-dependent zinc metalloprotease FtsH 1 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH1 PE=3 SV=1
Length = 653
Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/498 (50%), Positives = 336/498 (67%), Gaps = 21/498 (4%)
Query: 504 LSSLSGILPTLLIIG---------RRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEA 554
LS L+ +LP L+ IG + GG +S A+ ++ + F+DVAG +EA
Sbjct: 107 LSLLTYVLPFLIFIGFWIFLMNQVQGGGSKVMSFGKSRARRLSVDSPKITFRDVAGADEA 166
Query: 555 KVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSE 614
E+ E FL+NP+++ LGA+IPKG +L GPPGTGKTLLA+A AGEA VPF ++SGS+
Sbjct: 167 VEELHEIKEFLENPKKFQALGARIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFSISGSD 226
Query: 615 FLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLV 674
F+EMFVGVG SRVRD+F A+++APCI+F+DEIDAVGR RG GGH E+E TLNQLLV
Sbjct: 227 FVEMFVGVGASRVRDLFEQAKQNAPCIIFMDEIDAVGRHRGAGMGGGHDEREQTLNQLLV 286
Query: 675 EMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHL--KPL 732
EMDGF N++++AATNR D+LD ALLRPGRFDRQ+ V PD KGR+ I +VH KPL
Sbjct: 287 EMDGFEAKDNIIMIAATNRPDILDPALLRPGRFDRQVTVDRPDRKGRSKILEVHTRGKPL 346
Query: 733 KTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGM 792
++D D LA TPGFTGAD+AN+ NEAAL+AAR I E+ I RV+AG
Sbjct: 347 AREIDID----ALAGQTPGFTGADLANLVNEAALLAARTGKREITQVELEEGIMRVIAGP 402
Query: 793 EKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQYLPRE-QYL 851
EKKT V+ EE++ AYHE GHA+ G FL +ADP+ K+S+I RG+ LGY +P+E ++L
Sbjct: 403 EKKTRVMSSEERRITAYHEMGHALVGHFLEHADPVHKISVIGRGQALGYTISMPQEDKFL 462
Query: 852 YSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF 911
++ L D M MTLGGR +EEI FG ITTGA +DL+KVT +A V FGM+EK+G F
Sbjct: 463 TTRAALGDTMAMTLGGRAAEEIIFGEITTGASNDLEKVTGTAKQMVMRFGMSEKLGPRVF 522
Query: 912 --DMPQP---GEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERL 966
D QP E + YS+ A+ ID+E+R ++ A+ K +L EH+ S+ ++E L
Sbjct: 523 GHDQSQPFLGREFSSQADYSDEIAREIDDEIRRIVETAHQSAKDILTEHRESLVYISEIL 582
Query: 967 LKKEILDRNDMIELLGTR 984
+K+E ++++ L+ R
Sbjct: 583 IKRETIEKDQFEALVDGR 600
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 90 LSSLSGILPTLLIIGRSAEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCE 149
LS L+ +LP L+ IG +M G GG +S A+ ++ + F+DVAG +
Sbjct: 107 LSLLTYVLPFLIFIGFWIFLMNQVQG--GGSKVMSFGKSRARRLSVDSPKITFRDVAGAD 164
Query: 150 EAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
EA E+ E FL+NP+++ LGA+IPKG +L
Sbjct: 165 EAVEELHEIKEFLENPKKFQALGARIPKGVLL 196
>sp|Q3B6R3|FTSH_PELLD ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon luteolum
(strain DSM 273) GN=ftsH PE=3 SV=1
Length = 706
Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/472 (54%), Positives = 337/472 (71%), Gaps = 10/472 (2%)
Query: 522 GGLFGGVMESTAKLINSSDIGVR--FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIP 579
G F + ++ A L + D R FKDVAG +EAK E+ME V+FLK+P++Y LG K+P
Sbjct: 173 GAQFMNIGKNKAALYENLDEHTRITFKDVAGLDEAKAEVMEVVDFLKDPKKYTRLGGKLP 232
Query: 580 KGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAP 639
KG +L GPPGTGKTLLAKA AGEA+VPF ++SGS+F+EMFVGVG +RVRD+F A++ AP
Sbjct: 233 KGVLLVGPPGTGKTLLAKAVAGEADVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAP 292
Query: 640 CILFIDEIDAVGRKRG-GRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLD 698
CI+FIDEIDAVGR RG G GG+ E+ENTLNQLLVEMDGF T V+++AATNR DVLD
Sbjct: 293 CIIFIDEIDAVGRSRGKGAMMGGNDERENTLNQLLVEMDGFATDKGVILMAATNRPDVLD 352
Query: 699 KALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIA 758
ALLRPGRFDRQI V PD+KGR F+VH K + L D + LA+ TPGF GA+IA
Sbjct: 353 PALLRPGRFDRQIMVDKPDLKGRMDTFRVHTKNM--SLSPDVNLKALASQTPGFAGAEIA 410
Query: 759 NVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAG 818
N NEAAL+A+R +I MK FE AIERVVAG+EKK V+ P+EK+ VAYHEAGHA+
Sbjct: 411 NAANEAALLASRRNKESIEMKDFEDAIERVVAGLEKKNKVINPKEKRIVAYHEAGHAIVS 470
Query: 819 WFLRYADPLLKVSIIPRG-KGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFG 876
W + DP+ K+SI+PRG LGY +P E +YL +K +L R+C LGGR++EE FG
Sbjct: 471 WMMPENDPVQKISIVPRGMSALGYTMNIPLEDRYLMTKRELFARICGLLGGRIAEESVFG 530
Query: 877 RITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF---DMPQPGEMVLEKPYSESTAQLI 933
I+TGA++DL+K+T AY V +GM++K+GN+S+ + P G +EK + TA+LI
Sbjct: 531 EISTGAQNDLEKITGIAYNMVMVYGMSDKIGNLSYYESNNPYYGAPGVEKKFGGETARLI 590
Query: 934 DNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRP 985
D EV++++ +A + +L EH++ +E +A LL KE+L + E+LG RP
Sbjct: 591 DEEVKAIVESAADTVRTMLKEHRSKLEALARELLTKEMLQYCQIEEILGKRP 642
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 96 ILPTLLIIGRS----AEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVR--FKDVAGCE 149
+LP L+ G M G PG + F + ++ A L + D R FKDVAG +
Sbjct: 150 VLPFALLFGLYFFIFRRMGAGGPGAQ----FMNIGKNKAALYENLDEHTRITFKDVAGLD 205
Query: 150 EAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
EAK E+ME V+FLK+P++Y LG K+PKG +L
Sbjct: 206 EAKAEVMEVVDFLKDPKKYTRLGGKLPKGVLLV 238
>sp|B2UE66|FTSH_RALPJ ATP-dependent zinc metalloprotease FtsH OS=Ralstonia pickettii
(strain 12J) GN=ftsH PE=3 SV=1
Length = 714
Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/519 (48%), Positives = 347/519 (66%), Gaps = 22/519 (4%)
Query: 507 LSGILPTLLIIG------RRGGGLFGGVME---STAKLINSSDIGVRFKDVAGCEEAKVE 557
LS ++P ++ G +R GG G +ME S AK+ + GV F DVAG +EAK E
Sbjct: 192 LSWVVPAVIFFGIWSFLIKRVGGAAGSMMEIGKSKAKVYMQKETGVTFADVAGIDEAKEE 251
Query: 558 IMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 617
+ E V+FLK+PQ+Y LG KIPKG +L G PGTGKTLLAKA AGEA VPF ++SGS+F+E
Sbjct: 252 LSEIVSFLKDPQRYQRLGGKIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSDFVE 311
Query: 618 MFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMD 677
MFVGVG +RVRD+F A APCI+FIDE+DA+G+ R GG+ E+E TLNQLLVEMD
Sbjct: 312 MFVGVGAARVRDLFKQAETKAPCIIFIDELDALGKTRALNAVGGNEEREQTLNQLLVEMD 371
Query: 678 GFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLD 737
GF++ V+++AATNR ++LD ALLRPGRFDR + + PD+KGR I KVH+K + +
Sbjct: 372 GFDSNKGVIIMAATNRPEILDPALLRPGRFDRHVALDRPDLKGREQILKVHVKGVVLAPE 431
Query: 738 RDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTN 797
D KLA TPGF GAD+AN+ NEAAL+AAR + M F++A++R+V G+EKK
Sbjct: 432 VD--LTKLAGRTPGFAGADLANLVNEAALLAARKSKQMVEMADFDEALDRIVGGLEKKNR 489
Query: 798 VLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRG-KGLGYAQYLPRE-QYLYSKE 855
V+ P+EK+T+A+HEAGHA+ AD + KVSIIPRG LGY Q P E +YL +
Sbjct: 490 VMNPKEKETIAFHEAGHAIVAEHRPLADRVSKVSIIPRGVAALGYTQQTPTEDRYLLKRS 549
Query: 856 QLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFD-MP 914
+LLDR+ + LGGR++E++ FG ++TGA++DL++ T A + FGM++++G +++ MP
Sbjct: 550 ELLDRLDVLLGGRIAEQLIFGDVSTGAQNDLQRATDMARQMITQFGMSDQLGLATYENMP 609
Query: 915 QP-----GEMVLEK-PYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLK 968
P G M E+ YSESTAQ+ID EVR L++ A R +A L + ++ +A+ LL+
Sbjct: 610 NPLFAGTGLMQRERNEYSESTAQMIDAEVRKLLAEASHRVQATLEGQRTKLDALAQLLLE 669
Query: 969 KEILDRNDMIELLGTR--PFPEKSTYEEFVEGTGSFEED 1005
KE++DR D+ L + P P E T + + D
Sbjct: 670 KEVVDRQDLDMFLSAKVTPMPPPKPVANIEESTATGKPD 708
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
Query: 93 LSGILPTLLIIGRSAEMMGGRPGRRGGGLFGGVME---STAKLINSSDIGVRFKDVAGCE 149
LS ++P ++ G + ++ +R GG G +ME S AK+ + GV F DVAG +
Sbjct: 192 LSWVVPAVIFFGIWSFLI-----KRVGGAAGSMMEIGKSKAKVYMQKETGVTFADVAGID 246
Query: 150 EAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
EAK E+ E V+FLK+PQ+Y LG KIPKG +L
Sbjct: 247 EAKEELSEIVSFLKDPQRYQRLGGKIPKGVLLV 279
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/479 (50%), Positives = 324/479 (67%), Gaps = 13/479 (2%)
Query: 521 GGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPK 580
GG +S AKL V+FKDVAG +E K E++E V FLK+P+++ +LGA+IPK
Sbjct: 136 GGSRVMNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPK 195
Query: 581 GAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPC 640
G +L GPPGTGKTLLAKA AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K+APC
Sbjct: 196 GVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPC 255
Query: 641 ILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKA 700
++FIDEIDAVGR+RG GGH E+E TLNQLLVEMDGF+ ++++AATNR D+LD A
Sbjct: 256 LIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPA 315
Query: 701 LLRPGRFDRQIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIA 758
LLRPGRFDRQI V PD+ GR ++ KVH KPL ++ + +A TPGF+GAD+
Sbjct: 316 LLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVN----LKSIAMRTPGFSGADLE 371
Query: 759 NVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAG 818
N+ NEAAL+AAR I + ++A +RV+AG KK+ V+ +E+ VAYHE GH V G
Sbjct: 372 NLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIG 431
Query: 819 WFLRYADPLLKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGR 877
L AD + KV+I+PRG+ GYA LPRE +Y +K +LLD++ LGGRV+EEI FG
Sbjct: 432 LVLDEADMVHKVTIVPRGQAGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGE 491
Query: 878 ITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQ 931
++TGA +D ++ T A V FGM+EK+G + F Q G++ L E+ YS+ A
Sbjct: 492 VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAY 551
Query: 932 LIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKS 990
ID E++ +I Y R K +L E++ +E +A+ LLK E LD + L+ PE++
Sbjct: 552 EIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHGTLPERN 610
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 118 GGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPK 177
GG +S AKL V+FKDVAG +E K E++E V FLK+P+++ +LGA+IPK
Sbjct: 136 GGSRVMNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPK 195
Query: 178 GAMLT 182
G +L
Sbjct: 196 GVLLV 200
>sp|D1C1U7|FTSH1_SPHTD ATP-dependent zinc metalloprotease FtsH 1 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH1 PE=3
SV=1
Length = 653
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/505 (48%), Positives = 345/505 (68%), Gaps = 26/505 (5%)
Query: 504 LSSLSGILPTLLIIG------RRGGGLFGGVM---ESTAKLINSSDIGVRFKDVAGCEEA 554
LS+L+ ILPTL +IG R+ G + +S A++ + V F DVAG EEA
Sbjct: 112 LSALTFILPTLFLIGIVIFMMRQAQGTNNQAISFGKSRARMFTGNKPTVTFADVAGVEEA 171
Query: 555 KVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSE 614
K E++E V FLK P ++ LGA+IP+G +L GPPGTGKTLL++A AGEA VPF ++SGSE
Sbjct: 172 KEELVEVVEFLKYPDKFASLGARIPRGVLLVGPPGTGKTLLSRAVAGEAGVPFFSISGSE 231
Query: 615 FLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLV 674
F+EMFVGVG SRVRD+F A+++APCI+FIDEIDAVGR+RG G H E+E TLNQ+LV
Sbjct: 232 FVEMFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQTLNQILV 291
Query: 675 EMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHL--KPL 732
EMDGF++TTNV+V+AATNR DVLD ALLRPGRFDRQ+ + PDI GR +I +VH KPL
Sbjct: 292 EMDGFDSTTNVIVIAATNRPDVLDPALLRPGRFDRQVVLDRPDIAGRRAILEVHSRGKPL 351
Query: 733 KTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGM 792
++D+D ++L+R+ TPGF+GAD+ N+ NEAA++AAR TI + +AI+RV+AG
Sbjct: 352 ESDVDLEELARQ----TPGFSGADLENLVNEAAILAARRNKKTIGRRELTEAIDRVIAGP 407
Query: 793 EKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQYLPRE-QYL 851
E+K+ VL EK AYHEAGHA+ L +ADP+ KVSI+ RG GY + LP E ++
Sbjct: 408 ERKSRVLSEREKLMTAYHEAGHALVARMLPHADPVHKVSIVARGMMGGYTRVLPEEDRFF 467
Query: 852 YSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF 911
++K+Q D++ + +GG V+EE+ F I+TGA +D+++ T A V +GM++ +G ++F
Sbjct: 468 WTKKQFEDQLAVFMGGHVAEELVFQEISTGAANDIERATNLARRMVTEYGMSKTLGPLAF 527
Query: 912 DMPQPGEMVL-------EKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAE 964
+ E+V ++ YS+ A +ID E+RSLI AY R +L +H +E +A
Sbjct: 528 GRKE--ELVFLGREINEQRNYSDEVAYMIDQEIRSLIDTAYKRAHEILSQHMDKLEAIAM 585
Query: 965 RLLKKEILDRNDMIELLGT-RPFPE 988
L++ E +D +++ L RP P+
Sbjct: 586 LLMEAETIDGHELEALFDEPRPRPQ 610
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 90 LSSLSGILPTLLIIGRSAEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCE 149
LS+L+ ILPTL +IG MM G + G +S A++ + V F DVAG E
Sbjct: 112 LSALTFILPTLFLIGIVIFMMRQAQGTNNQAISFG--KSRARMFTGNKPTVTFADVAGVE 169
Query: 150 EAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
EAK E++E V FLK P ++ LGA+IP+G +L
Sbjct: 170 EAKEELVEVVEFLKYPDKFASLGARIPRGVLLV 202
>sp|A0PXM8|FTSH_CLONN ATP-dependent zinc metalloprotease FtsH OS=Clostridium novyi (strain
NT) GN=ftsH PE=3 SV=1
Length = 676
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/501 (50%), Positives = 331/501 (66%), Gaps = 17/501 (3%)
Query: 527 GVM---ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM 583
GVM +S AKL V FKDVAG +E K E+ E V+FLK P++Y+D+GA+IPKG +
Sbjct: 146 GVMNFGKSRAKLATPDSQKVTFKDVAGADEEKGELEEIVDFLKEPKKYLDMGARIPKGIL 205
Query: 584 LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILF 643
L GPPGTGKTLLAKA AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K++PCI+F
Sbjct: 206 LVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIIF 265
Query: 644 IDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLR 703
IDEIDAVGR+RG GGH E+E TLNQLLVEMDGF ++++AATNR D+LDKALLR
Sbjct: 266 IDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGVNEGIILVAATNRPDILDKALLR 325
Query: 704 PGRFDRQIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVC 761
PGRFDRQI V APD KGR + KVH+ K L D+D + LA TPGF GAD+ N+
Sbjct: 326 PGRFDRQILVGAPDAKGREEVLKVHVRNKRLSDDVDL----KVLAKRTPGFVGADLENLM 381
Query: 762 NEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFL 821
NEAAL+A R I M+ E+AI RV+AG EKK+ V+ E++K AYHEAGHA+ F
Sbjct: 382 NEAALLAVRANKKQIGMEELEEAITRVIAGPEKKSRVIHEEDRKITAYHEAGHAIVMKFS 441
Query: 822 RYADPLLKVSIIPRGKGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITT 880
++DP+ ++SIIPRG GY +LP R+ SK +L D M LGGRV+E+I G I+T
Sbjct: 442 PHSDPVHEISIIPRGMAGGYTMHLPERDTSYMSKSKLKDEMVGLLGGRVAEQIIIGDIST 501
Query: 881 GAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPG-----EMVLEKPYSESTAQLIDN 935
GA +D+++V+ A V +GM+EK+G ++F E+ K YSE A IDN
Sbjct: 502 GASNDIQRVSNIARKMVMEYGMSEKLGTITFGSDHDEVFIGREIGKSKNYSEEVAFEIDN 561
Query: 936 EVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEF 995
EV++L+ AY + + +L EH + VA+ LL KE + + ++ RP E + E
Sbjct: 562 EVKALVDEAYKKAEKILTEHIDKLHAVAKVLLDKEKVTGEEFNAIVEGRPLEELNKKENA 621
Query: 996 V--EGTGSFEEDTSLPEGLKD 1014
+ E + EE EG+ D
Sbjct: 622 IDLEKHDNVEEVHDDVEGVHD 642
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 124 GVM---ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM 180
GVM +S AKL V FKDVAG +E K E+ E V+FLK P++Y+D+GA+IPKG +
Sbjct: 146 GVMNFGKSRAKLATPDSQKVTFKDVAGADEEKGELEEIVDFLKEPKKYLDMGARIPKGIL 205
Query: 181 LT 182
L
Sbjct: 206 LV 207
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/469 (50%), Positives = 329/469 (70%), Gaps = 12/469 (2%)
Query: 515 LIIGRRGGGLFG--GVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYI 572
++ R GGG G V ++ K+ +I + F DVAG +EAK E+ E V FLK+P ++
Sbjct: 154 FLMRRMGGGPQGVLSVGKARVKIFAEKEITITFDDVAGIDEAKGELEEIVQFLKDPGKFQ 213
Query: 573 DLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFS 632
LG +IPKG +L G PGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRD+F
Sbjct: 214 RLGGRIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSEFVEMFVGVGAARVRDLFG 273
Query: 633 MARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATN 692
A+ HAPCI+FIDE+DA+G+ RG GGH E+E TLNQLLVEMDGF+ + V+++AATN
Sbjct: 274 QAKDHAPCIIFIDELDALGKARGLNPIGGHDEREQTLNQLLVEMDGFDPRSGVIIMAATN 333
Query: 693 RVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGF 752
R ++LD ALLRPGRFDR + + PDI+GR +I +VH+K +K + D +K+A +TPGF
Sbjct: 334 RPEILDPALLRPGRFDRHVAIDKPDIRGREAILRVHVKEVKLGSEVD--LKKIAGMTPGF 391
Query: 753 TGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEA 812
GAD+AN+ NEAAL+AAR + M F++A +R++ G+EKK + P+EK+ VAYHEA
Sbjct: 392 VGADLANLVNEAALVAARRDRDEVTMADFQEAADRIIGGLEKKNRAMNPKEKEIVAYHEA 451
Query: 813 GHAVAGWFLRYADPLLKVSIIPRG-KGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVS 870
GHA+ L DP+ KVSIIPRG LGY Q LP E +YL ++ +LLDR+ + LGGRVS
Sbjct: 452 GHALVAMLLPNVDPVNKVSIIPRGIAALGYTQQLPTEDRYLMTRNELLDRLQVLLGGRVS 511
Query: 871 EEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDM-PQPGEMVL-----EKP 924
EEI FG ++TGA++DL++ T A + V +GM+E++G +++ P+ + L E+
Sbjct: 512 EEIIFGDVSTGAQNDLQRATDIARSMVMEYGMSERLGPLTYTRDPRSAHLDLGLGSRERD 571
Query: 925 YSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILD 973
YSE AQ ID E+ ++ +A+ + +A L + +EK+A+ LL+KE +D
Sbjct: 572 YSEMIAQEIDEEITRIVEDAHEKVRATLKRERGCLEKLAKILLEKESID 620
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 116 RRGGGLFGGVM---ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLG 172
RR GG GV+ ++ K+ +I + F DVAG +EAK E+ E V FLK+P ++ LG
Sbjct: 157 RRMGGGPQGVLSVGKARVKIFAEKEITITFDDVAGIDEAKGELEEIVQFLKDPGKFQRLG 216
Query: 173 AKIPKGAMLT 182
+IPKG +L
Sbjct: 217 GRIPKGVLLV 226
>sp|Q6MJV1|FTSH2_BDEBA ATP-dependent zinc metalloprotease FtsH 2 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH2 PE=3 SV=1
Length = 615
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/510 (50%), Positives = 340/510 (66%), Gaps = 27/510 (5%)
Query: 496 VIYKTEIELSS----LSGILPTLLIIG---------RRGGGLFG--GVMESTAKLINSSD 540
V Y+ EIE + LS ++P L+ + GG+ G V +S A+L +
Sbjct: 90 VTYRREIENTFFRDLLSWVVPALIFVAVFLYFSRKFAEKGGMSGLMSVGKSGARLYAETG 149
Query: 541 IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATA 600
+ V F DVAG EEAK E+ E V FLK+PQ++ LGA++PKG +L GPPGTGKTLLAKA A
Sbjct: 150 VKVSFGDVAGVEEAKAELYEVVQFLKSPQEFGRLGARMPKGILLVGPPGTGKTLLAKAVA 209
Query: 601 GEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG-GRNF 659
GEA VPF +++GSEF+EMFVGVG +RVRD+F ARK+APCI+FIDE+DA+G+ RG +F
Sbjct: 210 GEAQVPFYSITGSEFVEMFVGVGAARVRDLFEQARKNAPCIIFIDELDALGKVRGVAGSF 269
Query: 660 GGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIK 719
GGH E+E TLNQLL E+DGF++ + VV+LAATNR +VLD ALLR GRFDRQ+ V PD
Sbjct: 270 GGHDEKEQTLNQLLAELDGFDSRSGVVILAATNRPEVLDPALLRAGRFDRQVLVDRPDRT 329
Query: 720 GRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMK 779
GR I +VHLK +K D + LA LT GFTGADIAN+ NEAA++A R T+ K
Sbjct: 330 GREQILRVHLKKIKADEALN--VEHLAHLTSGFTGADIANLINEAAMVATRRKAETVNEK 387
Query: 780 HFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKG- 838
F AIER+VAG+EKK+ +L +EK VA+HE GHA+ D + K+SIIPRG G
Sbjct: 388 DFVAAIERIVAGLEKKSRLLNEKEKAIVAHHEMGHAIMACLFPGVDKVQKISIIPRGLGA 447
Query: 839 LGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQV 897
LGY P E +YL ++ +LLD++C+ LGGRV+EE+ FG ++TGA DDL +VT A A V
Sbjct: 448 LGYTMQRPTEDRYLMTRPELLDKICVLLGGRVAEELIFGEVSTGASDDLVRVTNIAEALV 507
Query: 898 AHFGMNEKVGNVSFDMPQ------PGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKAL 951
+GM+E +GN+ F+ P PG + YSE +A ID E+R +++ RT+
Sbjct: 508 TRYGMSEVLGNIVFEQPTGNFLEVPGAGYRSRTYSEKSATEIDQEIRQIVAACALRTRES 567
Query: 952 LIEHKASVEKVAERLLKKEILDRNDMIELL 981
L + + ++K A +LL+KE L + IELL
Sbjct: 568 LAANLSILKKGAAQLLEKETLSEPE-IELL 596
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 82 VIYKTEIELSS----LSGILPTLLIIGRSAEMMGGRPGRRGGGLFG--GVMESTAKLINS 135
V Y+ EIE + LS ++P L+ + + + R GG+ G V +S A+L
Sbjct: 90 VTYRREIENTFFRDLLSWVVPALIFV--AVFLYFSRKFAEKGGMSGLMSVGKSGARLYAE 147
Query: 136 SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
+ + V F DVAG EEAK E+ E V FLK+PQ++ LGA++PKG +L
Sbjct: 148 TGVKVSFGDVAGVEEAKAELYEVVQFLKSPQEFGRLGARMPKGILLV 194
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/502 (48%), Positives = 332/502 (66%), Gaps = 23/502 (4%)
Query: 507 LSGILPTLLIIG---------RRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVE 557
L+ ILP +L+IG + GG +S A+L + + V F+DVA EE K E
Sbjct: 116 LAYILPIILLIGAWFFIMQRMQGGGSQMMSFGKSRARL-SENGKKVTFEDVANYEEVKEE 174
Query: 558 IMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 617
+ E V FLKNP ++ +GAK+PKG +L GPPGTGKTLLA+A AGEA VPF +SGS+F+E
Sbjct: 175 LQEVVEFLKNPDKFTRMGAKVPKGVLLVGPPGTGKTLLARAVAGEAGVPFFIISGSDFVE 234
Query: 618 MFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMD 677
MFVGVG SRVRD+F +K+APCI+FIDE+DAVGR+RG GGH E+E TLNQLLVEMD
Sbjct: 235 MFVGVGASRVRDLFEQGKKNAPCIIFIDELDAVGRQRGAGLGGGHDEREQTLNQLLVEMD 294
Query: 678 GFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHL--KPLKTD 735
GF ++V+AATNR DVLD ALLRPGRFDRQ+ V PD+KGR I K+HL KP+ D
Sbjct: 295 GFEPNEGIIVMAATNRPDVLDPALLRPGRFDRQVVVDKPDVKGRMGILKIHLRNKPVADD 354
Query: 736 LDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKK 795
+D + L+++ TPGFTGAD+ N+ NEAA++A R I M+ F+ AI++V+AG KK
Sbjct: 355 VDVEVLAKR----TPGFTGADMENLANEAAILAVRRRKNKITMEDFDDAIDKVIAGPAKK 410
Query: 796 TNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQYLPRE-QYLYSK 854
+ V+ E+K VAYHE GHA+ G L +AD K+SI+PRG+ G LP+E + SK
Sbjct: 411 SKVMSERERKLVAYHETGHALVGDLLEHADRTHKISIVPRGRAGGMRWALPKEDKNFMSK 470
Query: 855 EQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMP 914
++LLD++ + LGGR SE IF I+TGA++DL++ T+ A A V +GM+EK+G ++
Sbjct: 471 QELLDQITVLLGGRASESIFLEDISTGAQNDLERATKLARAMVTEYGMSEKLGPLTLGHK 530
Query: 915 QPGEMVL------EKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLK 968
++ L ++ YSE A ID EV S+I Y R + +L E+ A VE++ LL
Sbjct: 531 HDEQIFLGRDISRQRNYSEEIAAEIDKEVSSIIEYCYQRAEKILQENTAKVERIVRELLD 590
Query: 969 KEILDRNDMIELLGTRPFPEKS 990
+E LD + +L+ P + S
Sbjct: 591 RETLDAEQLQKLIKGEPLDDDS 612
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 93 LSGILPTLLIIGRSAEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAK 152
L+ ILP +L+IG +M G GG +S A+L + + V F+DVA EE K
Sbjct: 116 LAYILPIILLIGAWFFIMQRMQG--GGSQMMSFGKSRARL-SENGKKVTFEDVANYEEVK 172
Query: 153 VEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
E+ E V FLKNP ++ +GAK+PKG +L
Sbjct: 173 EELQEVVEFLKNPDKFTRMGAKVPKGVLLV 202
>sp|D5D8E3|FTSH_SULMD ATP-dependent zinc metalloprotease FtsH OS=Sulcia muelleri (strain
DMIN) GN=ftsH PE=3 SV=1
Length = 619
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/578 (44%), Positives = 360/578 (62%), Gaps = 36/578 (6%)
Query: 432 VLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFN----------IGSVDSFERNLE 480
+L+K + K V+NKK V L S +D N+ +F+ IG + F++ ++
Sbjct: 49 LLSKNKINKFIVLNKKKVSFTLNEKKSHLDSNNYNFFSKLHLSRYEFEIGDLQLFQKKID 108
Query: 481 LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLL------------IIGRRGGGLFG-G 527
+ I+P N+ YK L+ L+ I R F
Sbjct: 109 FYKELYEINP-NFEFKNYKIYTVLNFFYDYGFFLMIIIICWIFIFRKIASRSSESEFKFK 167
Query: 528 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 587
+ +S AKL ++I FKDVAG E K EI E V+FLK+P +Y LG KIPKGA+L GP
Sbjct: 168 IGKSKAKLYYYNNIT--FKDVAGLEGPKEEIKEIVDFLKSPNKYTKLGGKIPKGALLIGP 225
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKTLLAKA AGEA VPF ++SGS+F+EMFVGVG SRVRD+F +A+ +P I+FIDEI
Sbjct: 226 PGTGKTLLAKAVAGEAQVPFFSLSGSDFVEMFVGVGASRVRDLFYIAKLKSPSIIFIDEI 285
Query: 648 DAVGRKRGGRNF-GGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGR 706
DA+GR R N GG+ E+ENTLN+LL EMDGF+T TNV+VLAATNR DVLD ALLR GR
Sbjct: 286 DAIGRARIKNNIPGGNDERENTLNKLLTEMDGFSTKTNVIVLAATNRYDVLDDALLRSGR 345
Query: 707 FDRQIFVPAPDIKGRASIFKVHLKPLK--TDLDRDDLSRKLAALTPGFTGADIANVCNEA 764
FDR IF+ P +K R I KVHLK +K +D D +SR++ PGF+GADI+N+CNEA
Sbjct: 346 FDRTIFIDLPSLKERKDIMKVHLKKIKFSKSIDLDFISRQI----PGFSGADISNICNEA 401
Query: 765 ALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYA 824
AL+AAR + K F I R + G+EKK +++ EKK +AYHE GHA+ W + YA
Sbjct: 402 ALLAARRNKVKVETKDFIDTIYRRIGGIEKKNILIKKNEKKRIAYHETGHAIISWIIEYA 461
Query: 825 DPLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAED 884
+ +++I PRG+ LG A Y+P E+ + +++Q+ D +C LGGR +E + F +TGA +
Sbjct: 462 HSVFQITITPRGQSLGAAWYIPEERQITTEDQMKDEICTLLGGRAAEYLIFNNKSTGALN 521
Query: 885 DLKKVTQSAYAQVAHFGMNEKVGNVS-FDMPQPGEMVLEKPYSESTAQLIDNEVRSLISN 943
DL+++T+ A + V FG++ +GN+S FD + LEK YSE T+++ID E+ +I
Sbjct: 522 DLERITKQAQSMVKFFGLSS-LGNISYFDSTGRNDFSLEKAYSEKTSEIIDKEINKIIKE 580
Query: 944 AYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
Y R +L ++ + +AE+L KKE+L + D +L
Sbjct: 581 QYKRALEILKKNYDKLIFLAEKLFKKEVLFKEDFASIL 618
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 18 VLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFN----------IGSVDSFERNLE 66
+L+K + K V+NKK V L S +D N+ +F+ IG + F++ ++
Sbjct: 49 LLSKNKINKFIVLNKKKVSFTLNEKKSHLDSNNYNFFSKLHLSRYEFEIGDLQLFQKKID 108
Query: 67 LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMGGRPGRRGGG--LFGG 124
+ I+P N+ YK L+ L+II + + R
Sbjct: 109 FYKELYEINP-NFEFKNYKIYTVLNFFYDYGFFLMIIIICWIFIFRKIASRSSESEFKFK 167
Query: 125 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+ +S AKL ++I FKDVAG E K EI E V+FLK+P +Y LG KIPKGA+L
Sbjct: 168 IGKSKAKLYYYNNIT--FKDVAGLEGPKEEIKEIVDFLKSPNKYTKLGGKIPKGALL 222
>sp|Q1LLA9|FTSH_RALME ATP-dependent zinc metalloprotease FtsH OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=ftsH PE=3 SV=1
Length = 649
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/500 (47%), Positives = 333/500 (66%), Gaps = 24/500 (4%)
Query: 504 LSSLSGILPTLLII------------GRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGC 551
+ +L + PTLLII G +GG G +S A+LI+ + V F DVAGC
Sbjct: 118 VQALYYLGPTLLIIVFWFYMMRQMQGGGKGGAFSFG--KSRARLIDENQNAVTFADVAGC 175
Query: 552 EEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVS 611
+E+K E++E V+FLK+PQ++ LG +IP+G +L GPPGTGKTLLA+A AGEA VPF ++S
Sbjct: 176 DESKEEVVELVDFLKDPQKFQKLGGRIPRGVLLVGPPGTGKTLLARAIAGEAKVPFFSIS 235
Query: 612 GSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQ 671
GS+F+EMFVGVG +RVRDMF A+K APCI+FIDEIDAVGR RG GG+ E+E TLNQ
Sbjct: 236 GSDFVEMFVGVGAARVRDMFENAKKQAPCIVFIDEIDAVGRHRGAGMGGGNDEREQTLNQ 295
Query: 672 LLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLK- 730
+LVEMDGF + V+V+AATNR DVLDKALLRPGRFDRQ++V PDI+GR I KVH++
Sbjct: 296 MLVEMDGFEANSGVIVIAATNRADVLDKALLRPGRFDRQVYVGLPDIRGREQILKVHMRK 355
Query: 731 -PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVV 789
P+ D+D ++R TPGF+GAD+AN+ NEAAL AAR + M+ FE A +++
Sbjct: 356 VPIGNDVDASIIARG----TPGFSGADLANLVNEAALFAARRSKRVVDMQDFEDAKDKIY 411
Query: 790 AGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQYLP-RE 848
G E+K+ V++ EE+K AYHE+GHAV L ADP+ KV+I+PRG LG LP +
Sbjct: 412 MGPERKSTVMREEERKATAYHESGHAVVAKLLPKADPVHKVTIMPRGWALGVTWQLPEHD 471
Query: 849 QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGN 908
+Y K+ +L+ + + GGR +EE+F ++TGA +D ++ T+ A V FGM++ +G
Sbjct: 472 KYSKYKDNMLEEIAILFGGRAAEEVFLNAMSTGASNDFERATKIARDMVTRFGMSDSLGA 531
Query: 909 VSF-DMPQPGEM--VLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAER 965
+ + D Q G + K SE+T Q +D E+R +I + Y K LL E++ VE +
Sbjct: 532 MVYVDTEQDGMFGKLSSKTVSEATQQKVDAEIRRIIDDQYALAKRLLEENRDKVEAMTNA 591
Query: 966 LLKKEILDRNDMIELLGTRP 985
L++ E +D + +++ RP
Sbjct: 592 LMEWETIDAEQVNDIMAGRP 611
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 90 LSSLSGILPTLLIIGRSAEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCE 149
+ +L + PTLLII MM G GG F +S A+LI+ + V F DVAGC+
Sbjct: 118 VQALYYLGPTLLIIVFWFYMMRQMQGGGKGGAFS-FGKSRARLIDENQNAVTFADVAGCD 176
Query: 150 EAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
E+K E++E V+FLK+PQ++ LG +IP+G +L
Sbjct: 177 ESKEEVVELVDFLKDPQKFQKLGGRIPRGVLLV 209
>sp|B1GZK7|FTSH_UNCTG ATP-dependent zinc metalloprotease FtsH OS=Uncultured termite group
1 bacterium phylotype Rs-D17 GN=ftsH PE=3 SV=1
Length = 631
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/476 (49%), Positives = 326/476 (68%), Gaps = 15/476 (3%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
++ AKL + + FKDVAGC+EAK E+ E + FLK+P ++ LG KIPKG +L G PG
Sbjct: 140 KTKAKLAVGASKKITFKDVAGCDEAKEELQELIEFLKDPARFQKLGGKIPKGVLLFGSPG 199
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEANVPF + SGSEF+EMFVGVG SRVRD+F RK APC+LFIDEIDA
Sbjct: 200 TGKTLLAKAVAGEANVPFFSSSGSEFVEMFVGVGASRVRDLFDHGRKSAPCLLFIDEIDA 259
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDR 709
VGR R GGH E+E TLNQLLVEMDGF++ V+++AATNR DVLD ALLRPGRFDR
Sbjct: 260 VGRHRFAGIGGGHDEREQTLNQLLVEMDGFDSKEGVILIAATNRPDVLDPALLRPGRFDR 319
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAA 769
Q+ + +PD+K R I VH K ++ LD D +A TPGF GAD+AN+ NEAAL+AA
Sbjct: 320 QVIILSPDLKDREEILGVHSKKIR--LDNDVNLNVIARRTPGFVGADLANLVNEAALLAA 377
Query: 770 RDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLK 829
R+ + MK+ E+AI+R++AG ++K+ ++ +EK +AYHEAGH + FL ADP+ K
Sbjct: 378 RNSQNAVNMKNMEEAIDRILAGPQRKSRLMSDKEKNIIAYHEAGHTLVAKFLPSADPVHK 437
Query: 830 VSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKK 888
VSIIPRG LGY LP E +YL SK +LLD++ + GGRV+EE+ F ITTGA++D+ K
Sbjct: 438 VSIIPRGPALGYTLQLPEEDKYLTSKSELLDKLSILFGGRVAEELVFSEITTGAQNDISK 497
Query: 889 VTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL-------EKPYSESTAQLIDNEVRSLI 941
T A V FGM++K+G ++ + +P E V + +S T++LID EV+++I
Sbjct: 498 ATGIAMRMVTEFGMSDKIGPMA--LQRPNEEVFLGRDISRDARHSGKTSELIDEEVKNII 555
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLG---TRPFPEKSTYEE 994
++ +R ++ ++ + + K+ LL++E L D+ +++ P E S+ +E
Sbjct: 556 YSSKSRASKIIKDNVSILNKIVSYLLERENLSGEDIDKIIKGEELAPLSESSSVDE 611
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 98 PTLLIIGRSAEMMGGRP-GRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIM 156
P +L+I MM G G + FG ++ AKL + + FKDVAGC+EAK E+
Sbjct: 113 PVVLLILFCFWMMRGMSMGNKQAMSFG---KTKAKLAVGASKKITFKDVAGCDEAKEELQ 169
Query: 157 EFVNFLKNPQQYIDLGAKIPKGAML 181
E + FLK+P ++ LG KIPKG +L
Sbjct: 170 ELIEFLKDPARFQKLGGKIPKGVLL 194
>sp|C5CES8|FTSH_KOSOT ATP-dependent zinc metalloprotease FtsH OS=Kosmotoga olearia
(strain TBF 19.5.1) GN=ftsH PE=3 SV=1
Length = 645
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/463 (50%), Positives = 324/463 (69%), Gaps = 15/463 (3%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AK S+D V FKDVAG +EA E+ + VN+LKNP + GA++PKG +L GPPG
Sbjct: 148 KSPAKKYLSNDKNVTFKDVAGVDEAIEELQDAVNYLKNPNAFSQTGARMPKGILLVGPPG 207
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEANVPF +SGS+F+E+FVGVG +RVRD+FS A+ AP I+FIDEIDA
Sbjct: 208 TGKTLLARAVAGEANVPFFYISGSDFVELFVGVGAARVRDLFSQAKASAPSIIFIDEIDA 267
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDR 709
VGR RG GGH E+E TLNQ+LVEMDGF+ T V+V+AATNR D+LD ALLRPGRFD+
Sbjct: 268 VGRHRGAGLGGGHDEREQTLNQILVEMDGFDAKTGVIVMAATNRPDILDHALLRPGRFDK 327
Query: 710 QIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
+I V PD+KGRA I K+H+ KP+ D+D L+R+ TPGF GAD+ N+ NEAA++
Sbjct: 328 KITVDPPDVKGRAEILKIHMRGKPVDPDVDVWLLARR----TPGFVGADLENLVNEAAIL 383
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR I MK E+AI+RV+AG +K+ ++ P+EKK VAYHE GHA+ G L A P+
Sbjct: 384 AARRKKKIIGMKELEEAIDRVIAGPARKSRIMNPKEKKIVAYHELGHAIVGLALPNAYPV 443
Query: 828 LKVSIIPRGKG-LGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
KV++IPRG LG+ + LP E +YL S+ ++LD + LGGR +EEI FG ITTGA +D
Sbjct: 444 HKVTVIPRGSASLGFTESLPSEDRYLVSRSEMLDNLAQILGGRAAEEIVFGEITTGAAND 503
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKP------YSESTAQLIDNEVRS 939
L++ TQ A V GM++++G +++ + GE+ L + YSE A IDNEV+
Sbjct: 504 LERATQMARTMVCQLGMSDRLGPIAWG-KEEGEVFLGRELTRMRNYSEEIASEIDNEVKK 562
Query: 940 LISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLG 982
++ A+ R + L+ + + ++K AE L++KE + ++ E++G
Sbjct: 563 IVIEAHERARKLVEKFRDKLDKAAEYLIEKETITGKELAEIVG 605
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
+S AK S+D V FKDVAG +EA E+ + VN+LKNP + GA++PKG +L
Sbjct: 148 KSPAKKYLSNDKNVTFKDVAGVDEAIEELQDAVNYLKNPNAFSQTGARMPKGILLV 203
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/470 (51%), Positives = 324/470 (68%), Gaps = 11/470 (2%)
Query: 520 RGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIP 579
RG FG +S A+L++ V FKDVAG EEAK E+ E V FLK+P+++ LG +IP
Sbjct: 130 RGAFSFG---KSRARLLSGGKTKVTFKDVAGVEEAKEEVQELVEFLKDPKKFQKLGGRIP 186
Query: 580 KGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAP 639
KG ++ GPPGTGKTLLAKA AGEA+VPF ++SGS+F+EMFVGVG SRVRDMF AR+HAP
Sbjct: 187 KGVLMVGPPGTGKTLLAKAIAGEADVPFFSISGSDFVEMFVGVGASRVRDMFEQARRHAP 246
Query: 640 CILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDK 699
CI+FIDEIDAVGR RG GGH E+E TLN LLVEMDG + V+V+AATNR DVLD
Sbjct: 247 CIVFIDEIDAVGRARGTGLGGGHDEREQTLNALLVEMDGIESQEGVIVIAATNRKDVLDP 306
Query: 700 ALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIAN 759
ALLRPGRFDR++ V PDI+GR I +VH + +K + DLS LA TPGF+GA++AN
Sbjct: 307 ALLRPGRFDREVRVNLPDIRGREQILRVHAQKIKLSKNA-DLS-ALARGTPGFSGAELAN 364
Query: 760 VCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGW 819
+ NEAALIAA+ + E+A ++V G E+++ + EE+KT AYHEAGHAV
Sbjct: 365 LINEAALIAAKKGKDNVDQPDLEEARDKVRWGKERRSLAMSEEERKTTAYHEAGHAVLNV 424
Query: 820 FLRYADPLLKVSIIPRGKGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFGRI 878
L DP+ KV+IIPRG LG LP ++Y K+++LD +C+ +GGRV+EE+F G I
Sbjct: 425 LLENTDPIHKVTIIPRGPALGVTMMLPASDKYNARKKEVLDDLCVAMGGRVAEEVFLGDI 484
Query: 879 TTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF----DMPQPG-EMVLEKPYSESTAQLI 933
++GA D+++ T A V +GM+EK+G V + M G E+ + YSE+TA+ I
Sbjct: 485 SSGASGDIRQATWYARKMVCEWGMSEKLGMVHYADDSSMVFLGRELGTSRGYSEATARAI 544
Query: 934 DNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGT 983
D+EV+ I AY + K +++EHK VE +A+ LL+ E L+ + + E++ T
Sbjct: 545 DHEVQHFIQAAYEKAKRIILEHKDKVEALAQALLEYETLNADQVTEIVKT 594
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 96 ILPTLLII------GRSAEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCE 149
+LP LL I R M GR G FG +S A+L++ V FKDVAG E
Sbjct: 107 VLPFLLFILALYFLFRQQIRMAGR----GAFSFG---KSRARLLSGGKTKVTFKDVAGVE 159
Query: 150 EAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
EAK E+ E V FLK+P+++ LG +IPKG ++
Sbjct: 160 EAKEEVQELVEFLKDPKKFQKLGGRIPKGVLMV 192
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/468 (50%), Positives = 327/468 (69%), Gaps = 13/468 (2%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A++ S+ V F DVAG +EAK E+ E V FLK P+++ LGA+IP+G +L GPPG
Sbjct: 147 KSRARVFTSNRPTVTFDDVAGVDEAKEELQEIVEFLKYPEKFAALGARIPRGVLLVGPPG 206
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLL++A AGEA VPF ++SGSEF+EMFVGVG SRVRD+F A+++APCI+FIDEIDA
Sbjct: 207 TGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFIDEIDA 266
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDR 709
VGR+RG G H E+E TLNQ+LVEMDGF+++TNV+V+AATNR DVLD ALLRPGRFDR
Sbjct: 267 VGRQRGAGLGGSHDEREQTLNQILVEMDGFDSSTNVIVIAATNRPDVLDPALLRPGRFDR 326
Query: 710 QIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
Q+ + PD+ GR +I KVH KPL++D+D +DL+R+ TPGF+GAD+ N+ NEAA++
Sbjct: 327 QVVLDRPDLHGRLAILKVHTRGKPLESDVDLEDLARQ----TPGFSGADLENLVNEAAIL 382
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR TI + +AI+RVVAG E+K+ + EK AYHEAGHA+ L +ADP+
Sbjct: 383 AARRNKKTIGRRELYEAIDRVVAGPERKSRRISEREKLMTAYHEAGHALVARMLPHADPV 442
Query: 828 LKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDL 886
KVSI+ RG GY + LP E ++ ++K+Q ++ + + G V+EE+ F ++TGA +D+
Sbjct: 443 HKVSIVARGMMGGYTRVLPEEDRFFWTKKQFEAQLAVFMAGLVAEELVFQEVSTGAANDI 502
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQP-----GEMVLEKPYSESTAQLIDNEVRSLI 941
++ T A V FGM+E++G ++F + E+ ++ YS+ A ID EVR LI
Sbjct: 503 ERATTLARRMVTEFGMSERLGPLAFGRKEELVFLGREIAEQRNYSDQVAYEIDQEVRRLI 562
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGT-RPFPE 988
AY K +L++H +EK+A L++KE LD +++ L RP PE
Sbjct: 563 DQAYQTAKQILLDHMDKLEKIATLLVEKETLDGHEIEALFDEPRPRPE 610
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
+S A++ S+ V F DVAG +EAK E+ E V FLK P+++ LGA+IP+G +L
Sbjct: 147 KSRARVFTSNRPTVTFDDVAGVDEAKEELQEIVEFLKYPEKFAALGARIPRGVLLV 202
>sp|A9EXK6|FTSH4_SORC5 ATP-dependent zinc metalloprotease FtsH 4 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH4 PE=3 SV=1
Length = 648
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/479 (48%), Positives = 326/479 (68%), Gaps = 14/479 (2%)
Query: 521 GGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPK 580
GGG +S A+L++ + V F DVAG +EAK E+ E + FLK+P+++ LG +IPK
Sbjct: 140 GGGKAMSFGKSRARLLSEAQNKVTFADVAGIDEAKDELEEIIAFLKDPKKFQKLGGRIPK 199
Query: 581 GAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPC 640
G ++ GPPGTGKTLLA+A AGEA VPF ++SGS+F+EMFVGVG SRVRD+F +KHAPC
Sbjct: 200 GVLMMGPPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKHAPC 259
Query: 641 ILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKA 700
I+FIDEIDAVGR RG GGH E+E TLNQLLVEMDGF + V+++AATNR DVLD A
Sbjct: 260 IIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVIIVAATNRPDVLDPA 319
Query: 701 LLRPGRFDRQIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIA 758
+LRPGRFDR+I V PD++GR I +VH K PL D+D + L+R TPGF GADI
Sbjct: 320 ILRPGRFDRRIVVNRPDVRGREGILRVHTKKVPLGPDVDMEILARG----TPGFVGADIE 375
Query: 759 NVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAG 818
N+ NEAAL+AAR + M FE A ++V+ G E+++ V+ EEK+T AYHEAGHA+
Sbjct: 376 NLVNEAALLAARQDKDVVSMVDFEMAKDKVLMGAERRSMVISDEEKRTTAYHEAGHALVA 435
Query: 819 WFL-RYADPLLKVSIIPRGKGLGYAQYLPREQYL-YSKEQLLDRMCMTLGGRVSEEIFFG 876
L +++DP+ KV+IIPRG LG Q LP+E L S++ R+ + +GGRV+EEI FG
Sbjct: 436 KLLEKFSDPVHKVTIIPRGPALGLTQQLPKEDRLSMSRDFAKARLSVLMGGRVAEEIVFG 495
Query: 877 RITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMV------LEKPYSESTA 930
+ TTGA +D+K+ + A V FGM++ +G +S+ + + + YSE+ A
Sbjct: 496 QFTTGAGNDIKQASNLARRMVTEFGMSDVIGPISYGADEESVFLGRDFTSRRRDYSETIA 555
Query: 931 QLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEK 989
ID+EVR I +A+ + LL +++ +E++A LL++E LD ++ ++G R P++
Sbjct: 556 NQIDDEVRRFILDAHAEARQLLTDNREILERLATALLERETLDAEEVDAIVGGRELPQR 614
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 96 ILPTLLIIGRSAEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEI 155
+LPT+ ++ M R + GGG +S A+L++ + V F DVAG +EAK E+
Sbjct: 120 LLPTVFLLVMFYLFM--RQLQAGGGKAMSFGKSRARLLSEAQNKVTFADVAGIDEAKDEL 177
Query: 156 MEFVNFLKNPQQYIDLGAKIPKGAML 181
E + FLK+P+++ LG +IPKG ++
Sbjct: 178 EEIIAFLKDPKKFQKLGGRIPKGVLM 203
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/476 (49%), Positives = 323/476 (67%), Gaps = 15/476 (3%)
Query: 518 GRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 577
G RG FG +S AKL++ V F+DVAG EEAK E+ E V FLK+P ++ LG K
Sbjct: 129 GGRGAMSFG---KSKAKLMSDKAAKVTFQDVAGIEEAKEELQEVVQFLKDPHKFQRLGGK 185
Query: 578 IPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKH 637
IPKG +L GPPGTGKTLLA+A AGEANVPF +SGS+F+EMFVGVG +RVRDMF +K+
Sbjct: 186 IPKGVLLVGPPGTGKTLLARAIAGEANVPFFNLSGSDFVEMFVGVGAARVRDMFEQGKKN 245
Query: 638 APCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVL 697
APCI+FIDEIDAVGR RG GGH E+E TLNQLLVEMDGF +T V+++AATNR DVL
Sbjct: 246 APCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESTEGVIMVAATNRPDVL 305
Query: 698 DKALLRPGRFDRQIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGA 755
D ALLRPGRFDRQ+ VP PDI GR I KVH+ PL +D + ++R TPGF+GA
Sbjct: 306 DPALLRPGRFDRQVTVPNPDILGRTQILKVHMNKVPLSDSVDAEVIARA----TPGFSGA 361
Query: 756 DIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHA 815
D+AN+ NEAALIAA+ + M+ FE A ++V+ G +++ V+ +E+KT AYHEAGHA
Sbjct: 362 DLANLVNEAALIAAQLDKRVVEMEDFENAKDKVMMGKPRRSAVISEKERKTTAYHEAGHA 421
Query: 816 VAGWFLRYADPLLKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIF 874
V L ADP+ KV+IIPRG+ LG LP E +Y YSK QL + + +GGR++EE+
Sbjct: 422 VVAMALDGADPVHKVTIIPRGRALGLTMQLPLEDRYTYSKVQLEQNIAILMGGRLAEELV 481
Query: 875 FGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF-----DMPQPGEMVLEKPYSEST 929
++TTGA +D+++ T A + +GM++ +G +++ ++ E+ K SE T
Sbjct: 482 LNQLTTGAGNDIQRATDLARKMICSYGMSDTLGPLTYGENEQEIFLGREITQHKSVSEET 541
Query: 930 AQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRP 985
A+ ID EV ++ Y R K +L + + +A+ LL++E +D +++I+L+ P
Sbjct: 542 ARRIDAEVFDIVDRNYKRAKQILTDKMEVLHTMAQALLERETIDADEVIKLMAGEP 597
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 97 LPTLLIIGR----SAEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAK 152
P LL+I +M G G RG FG +S AKL++ V F+DVAG EEAK
Sbjct: 109 FPMLLLIAVWIYFMRQMQSG--GGRGAMSFG---KSKAKLMSDKAAKVTFQDVAGIEEAK 163
Query: 153 VEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
E+ E V FLK+P ++ LG KIPKG +L
Sbjct: 164 EELQEVVQFLKDPHKFQRLGGKIPKGVLL 192
>sp|Q6MDI5|FTSH_PARUW ATP-dependent zinc metalloprotease FtsH OS=Protochlamydia
amoebophila (strain UWE25) GN=ftsH PE=3 SV=1
Length = 916
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/459 (49%), Positives = 321/459 (69%), Gaps = 9/459 (1%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A+L+N D + FKDVAG +EA E+ E V FLKNPQ++ LG KIPKG + GPPG
Sbjct: 408 KSPARLLNKGDNKITFKDVAGVDEALEELQEIVEFLKNPQKFTSLGGKIPKGVLCIGPPG 467
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTL+AKA AGEA+ PF ++SGS+F+EMFVGVG SR+RD+F A+K APCI+F+DEIDA
Sbjct: 468 TGKTLIAKAVAGEADRPFFSISGSDFVEMFVGVGASRIRDLFEQAKKAAPCIIFMDEIDA 527
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDR 709
VGR RG GGH E+E TLNQLLVEMDGF+T V+++AATNR DVLDKALLRPGRFDR
Sbjct: 528 VGRHRGVGMGGGHDEREQTLNQLLVEMDGFDTNEGVILMAATNRPDVLDKALLRPGRFDR 587
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAA 769
++ + PDIKGR I KVH + +K D D ++ +A TPG +GAD+AN+ NE+AL+AA
Sbjct: 588 RVIIGLPDIKGRYDILKVHARRIKMDPSIDLMA--IARSTPGSSGADLANILNESALLAA 645
Query: 770 RDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLK 829
R T + + +A ++V+ G E+++ + EK+T AYHE+GH V G ++ DP+ K
Sbjct: 646 RKGRTAVTAQETIEARDKVLYGKERRSLEIDENEKRTTAYHESGHTVVGLIVKSGDPVDK 705
Query: 830 VSIIPRGKGLGYAQYLPREQYL-YSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKK 888
V+IIPRG LG +LP++ + Y K++L D++ + +GGRV+EEIF G +++GA+ D+++
Sbjct: 706 VTIIPRGMSLGATMFLPKKNRVSYWKQELHDQLAVLMGGRVAEEIFVGDVSSGAQQDIER 765
Query: 889 VTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVRSLIS 942
TQ A + V +GM++K+G V++D G EK YS+ TAQ ID+EVR ++
Sbjct: 766 ATQLARSMVCKWGMSDKLGAVAYDERSEGGGQYGFGDHHEKTYSDETAQAIDSEVRRILD 825
Query: 943 NAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
A + +++++K VE + L++ E LD D+ E++
Sbjct: 826 EALAIARKIILDYKEQVELLTLMLIEFETLDSEDIQEIV 864
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM 180
+S A+L+N D + FKDVAG +EA E+ E V FLKNPQ++ LG KIPKG +
Sbjct: 408 KSPARLLNKGDNKITFKDVAGVDEALEELQEIVEFLKNPQKFTSLGGKIPKGVL 461
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/494 (48%), Positives = 326/494 (65%), Gaps = 26/494 (5%)
Query: 511 LPTLLIIG-----RRG----GGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEF 561
LP LL++G RR G +S A++ V F DVAG E+AK+E+ E
Sbjct: 117 LPILLLVGIFFLFRRAQSGPGSQAMNFGKSKARVQMEPQTQVTFGDVAGIEQAKLELTEV 176
Query: 562 VNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVG 621
V+FLKN ++ +LGAKIPKG +L GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVG
Sbjct: 177 VDFLKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVG 236
Query: 622 VGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNT 681
VG SRVRD+F A+ +APCI+FIDEIDAVGR+RG GG+ E+E TLNQLL EMDGF
Sbjct: 237 VGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEG 296
Query: 682 TTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHL--KPLKTDLDRD 739
T ++++AATNR DVLD AL+RPGRFDRQ+ V PD GR I VH K L D+D D
Sbjct: 297 NTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLD 356
Query: 740 DLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVL 799
++R+ TPGFTGAD++N+ NEAA++AAR T I M AI+RV+AG EKK V+
Sbjct: 357 KIARR----TPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEKKNRVM 412
Query: 800 QPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQYLPREQY----LYSKE 855
+ K VAYHEAGHA+ G + DP+ K+SIIPRG+ G + P E LYS+
Sbjct: 413 SEKRKTLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMESGLYSRS 472
Query: 856 QLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDM 913
L ++M + LGGR++EEI FG +TTGA +DL++V + A V FGM++++G V+
Sbjct: 473 YLQNQMAVALGGRIAEEIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGR 532
Query: 914 PQPG-----EMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLK 968
G ++ ++ +S+ TA ID EV L+ AY R K +L+E++ ++++AE L++
Sbjct: 533 QGGGVFLGRDIASDRDFSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVE 592
Query: 969 KEILDRNDMIELLG 982
KE +D ++ LL
Sbjct: 593 KETVDSEELQTLLA 606
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
Query: 97 LPTLLIIG-----RSAEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEA 151
LP LL++G R A+ PG + FG +S A++ V F DVAG E+A
Sbjct: 117 LPILLLVGIFFLFRRAQ---SGPGSQAMN-FG---KSKARVQMEPQTQVTFGDVAGIEQA 169
Query: 152 KVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
K+E+ E V+FLKN ++ +LGAKIPKG +L
Sbjct: 170 KLELTEVVDFLKNADRFTELGAKIPKGVLLV 200
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/460 (50%), Positives = 317/460 (68%), Gaps = 14/460 (3%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S A+ + V F DVAG +EA E+ E FL+NPQ++ LGA+IPKGA+L GPPGT
Sbjct: 174 SRARRMTKDQPKVTFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGT 233
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTLLA+A AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A++++PCI+F+DEIDAV
Sbjct: 234 GKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAV 293
Query: 651 GRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQ 710
GR+RG GGH E+E TLNQLLVEMDGF++ + +++LAATNR D+LD ALLRPGRFDRQ
Sbjct: 294 GRQRGAGLGGGHDEREQTLNQLLVEMDGFDSKSGIIMLAATNRPDILDPALLRPGRFDRQ 353
Query: 711 IFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIA 768
I V PD+ GR I KVH KPL D+D + ++R TPGFTGAD+AN+ NEAAL+A
Sbjct: 354 IVVDRPDLPGRIKILKVHTRGKPLGEDVDIETIARG----TPGFTGADLANLVNEAALLA 409
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
AR I M E+AI+RV+AG E+KT ++ +EK+ AYHEAGHA+ G L ADP+
Sbjct: 410 ARHNKEQIEMAEMEEAIDRVIAGPERKTRLISEKEKEITAYHEAGHAIVGALLPEADPVH 469
Query: 829 KVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLK 887
KV+IIPRG+ LG LP E +++ S+ QL+ ++ LGGR +E + F ITTGA +D++
Sbjct: 470 KVTIIPRGQALGVTMSLPEEDRFMMSRAQLMAQLSYMLGGRAAERVVFEEITTGASNDIE 529
Query: 888 KVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVRSLI 941
+ T+ A V +GM+EK+G ++ G++ + + YS+ A ID E+R L+
Sbjct: 530 RATKVARQMVTRYGMSEKLGLIALGQ-HDGQVFMGRDLHAQPDYSDEIAFQIDKEIRRLV 588
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
AY + LL+ ++ +EK+A L++ E +D + L+
Sbjct: 589 DEAYDTAEDLLVRNRRLLEKLASDLIEYETVDAEHLRRLV 628
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 128 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
S A+ + V F DVAG +EA E+ E FL+NPQ++ LGA+IPKGA+L
Sbjct: 174 SRARRMTKDQPKVTFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLV 228
>sp|B2A3Q4|FTSH_NATTJ ATP-dependent zinc metalloprotease FtsH OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=ftsH PE=3 SV=1
Length = 693
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/579 (44%), Positives = 367/579 (63%), Gaps = 24/579 (4%)
Query: 421 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFE--RN 478
+++ + +F+N V G V+++++ + + G DG +F+ + G + E +
Sbjct: 33 EDLFYNEFLNKV-EAGEVDRVDITERD------IEGELTDGTSFVTRDPGDPELIETLKE 85
Query: 479 LELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRRGGGLFGGVMESTAKLINS 538
E+ + + ++ I L I + + GGG +S AKL
Sbjct: 86 YEVNIKDHEVPGPPWWASLFTYIIPFVLLIAIFFFFMQQSQGGGGRMMNFGKSKAKLHEG 145
Query: 539 SD-IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAK 597
V+F DVAG +E K E++E VNFLK PQ++IDLGA+IPKG +L GPPGTGKTLL +
Sbjct: 146 DQKSNVKFHDVAGADEEKEELVEVVNFLKEPQKFIDLGARIPKGVLLVGPPGTGKTLLGR 205
Query: 598 ATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR 657
A AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K++PCI+FIDEIDAVGR+RG
Sbjct: 206 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNSPCIVFIDEIDAVGRQRGAG 265
Query: 658 NFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPD 717
GGH E+E TLNQLLVEMDGF+ ++V+AATNR D+LD AL RPGRFDRQI V APD
Sbjct: 266 LGGGHDEREQTLNQLLVEMDGFDVNEGIIVMAATNRSDILDPALQRPGRFDRQITVNAPD 325
Query: 718 IKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTT 775
+KGR I KVH KPL+ ++D ++R+ TPGFTGAD+ N+ NEAA+ AAR
Sbjct: 326 LKGREEILKVHARDKPLEDNVDLKVVARR----TPGFTGADLENLVNEAAIYAARRNKNR 381
Query: 776 IVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR 835
I MK E AI+RV+AG EKK+ V+ EKK VAYHEAGHA+ G+ L + DP+ KVSIIPR
Sbjct: 382 IGMKELEGAIDRVIAGTEKKSRVISEFEKKIVAYHEAGHAIVGYLLPHTDPVHKVSIIPR 441
Query: 836 GKGLGYAQYLPREQYLY-SKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAY 894
G G+ LP E + +K +LL+R+ LGGRV+EE+ I+TGA++DL++ T
Sbjct: 442 GAAGGFTLMLPEEDRQFMTKTELLERVSTLLGGRVAEELKLKEISTGAQNDLERATTIVR 501
Query: 895 AQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVRSLISNAYTRT 948
+ +GM+E +G ++ Q G++ L +K YSE+ A ID E+R+++ ++Y
Sbjct: 502 QMIMEYGMSENLGPITLGQKQ-GQVFLGRDIARDKDYSENIAYAIDKEIRNMVDSSYQEA 560
Query: 949 KALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFP 987
+ L E+ +EK+A+ L+++E L ++ L+ + P
Sbjct: 561 RETLEENIDKLEKIAQALMERETLVAKEIKMLMEGKDLP 599
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 91 SSLSGILPTLLIIGRSAEMMGGRPGRRGGGLFGGVMESTAKLINSSD-IGVRFKDVAGCE 149
S + I+P +L+I M G GGG +S AKL V+F DVAG +
Sbjct: 103 SLFTYIIPFVLLIAIFFFFMQQSQG--GGGRMMNFGKSKAKLHEGDQKSNVKFHDVAGAD 160
Query: 150 EAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
E K E++E VNFLK PQ++IDLGA+IPKG +L
Sbjct: 161 EEKEELVEVVNFLKEPQKFIDLGARIPKGVLLV 193
>sp|A9BJK3|FTSH3_PETMO ATP-dependent zinc metalloprotease FtsH 3 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=ftsH3 PE=3 SV=1
Length = 645
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/491 (49%), Positives = 336/491 (68%), Gaps = 19/491 (3%)
Query: 521 GGGLFGGV--MESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKI 578
GGG G+ ++S AK + F DVAG +EAK E+ + V FLK+P+ + LGA++
Sbjct: 135 GGGANQGMNFIKSPAKKYDPKKTRTTFNDVAGVKEAKEELTDVVKFLKDPKVFNRLGARM 194
Query: 579 PKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHA 638
PKG +L G PGTGKTLLA+A AGEA VPF +SGS+F+E+FVGVG +RVRD+F+ A+ +A
Sbjct: 195 PKGVLLVGEPGTGKTLLARAVAGEAGVPFFYISGSDFVELFVGVGAARVRDLFNQAKANA 254
Query: 639 PCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLD 698
P I+FIDEIDAVGR+RG GGH E+E TLN +LVEMDGF+ + ++V+AATNR DVLD
Sbjct: 255 PAIIFIDEIDAVGRQRGSGLGGGHDEREQTLNSILVEMDGFDPSIGIIVMAATNRPDVLD 314
Query: 699 KALLRPGRFDRQIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGAD 756
KALLRPGRFD+++ + PD +GR I K+H K + D+D + L+R TPGF GAD
Sbjct: 315 KALLRPGRFDKKVVIDRPDAEGRKDILKIHFRGKKIAPDVDLEVLARA----TPGFVGAD 370
Query: 757 IANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAV 816
+ N+ NEAAL+AAR+ I MK E+AIERV+ G E+KT VL +EK+ VAYHE GHA+
Sbjct: 371 LENLVNEAALLAARNGEKFITMKDCEEAIERVIVGPERKTRVLSEQEKEVVAYHELGHAI 430
Query: 817 AGWFLRYADPLLKVSIIPRG-KGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIF 874
G L ADP+ KV+IIPRG LGY LP E +YL +K ++LD + + L GR +EEI
Sbjct: 431 LGTILPNADPVHKVTIIPRGYAALGYTLQLPSEDRYLMNKSEILDDIAVMLAGRAAEEII 490
Query: 875 FGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF-----DMPQPGEMVLEKPYSEST 929
F IT+GAE+DLK+ T+ A V FGM+EK+G V++ + E+ EK YS+ T
Sbjct: 491 FDEITSGAENDLKRATEMARRMVESFGMSEKIGPVAWASESEETFLARELFREKNYSDET 550
Query: 930 AQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEK 989
A+ +D+EV+ +I+ +Y + K++L+E+K ++ +A+ LLKKE + ++ +LL +
Sbjct: 551 AKELDSEVKQIINKSYEKAKSVLLENKEKLQFIAQYLLKKETISGQELRDLLQK----DT 606
Query: 990 STYEEFVEGTG 1000
+E+VE G
Sbjct: 607 DDLKEYVENLG 617
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 118 GGGLFGGV--MESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKI 175
GGG G+ ++S AK + F DVAG +EAK E+ + V FLK+P+ + LGA++
Sbjct: 135 GGGANQGMNFIKSPAKKYDPKKTRTTFNDVAGVKEAKEELTDVVKFLKDPKVFNRLGARM 194
Query: 176 PKGAMLT 182
PKG +L
Sbjct: 195 PKGVLLV 201
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/461 (51%), Positives = 322/461 (69%), Gaps = 15/461 (3%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AK+ V+ +VAG +E K E+ E + +LK+P ++ LG + PKG + G PG
Sbjct: 147 KSKAKVYIEEKPNVKLDNVAGMDEVKEEVAEVIEYLKDPARFRKLGGRPPKGILFYGEPG 206
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
GKTLLAKA AGEA+VPFI+VSGS+F+EMFVGVG +R+RD F ARK+APCI+FIDEIDA
Sbjct: 207 VGKTLLAKALAGEAHVPFISVSGSDFVEMFVGVGAARMRDTFETARKNAPCIVFIDEIDA 266
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDR 709
VGR RG N GG+ E+E TLNQLLVEMDGF+T+ ++++AATNR D+LD ALLRPGRFDR
Sbjct: 267 VGRSRGAINLGGNDEREQTLNQLLVEMDGFDTSEGILIIAATNRPDILDPALLRPGRFDR 326
Query: 710 QIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
QIF+P PD+KGR I KVH KPL D+D + ++R TPGFTGAD+ N+ NEAAL+
Sbjct: 327 QIFIPKPDVKGRYEILKVHAKNKPLAKDVDLELIARA----TPGFTGADLENILNEAALL 382
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR I M+ E+AI+RV+ G+E++ + P+EK+ +A HEAGHA+ G + ADPL
Sbjct: 383 AARKRKDLIHMEDLEEAIDRVMMGLERRGMAISPKEKEKIAVHEAGHALMGLMMPDADPL 442
Query: 828 LKVSIIPRGKGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAED 884
KVSIIPRG LG LP ++++Y K LL R+ + +GGR +EE+F+G+ ITTGAE+
Sbjct: 443 HKVSIIPRGMALGVTTQLPIDDKHIYDKADLLSRIHILMGGRCAEEVFYGKDGITTGAEN 502
Query: 885 DLKKVTQSAYAQVAHFGMNEKVGNVSFDMP-QP---GEMVLEKPYSESTAQLIDNEVRSL 940
DL++ T AY VA +GM+E VG +S P G V E S + ID EV+ L
Sbjct: 503 DLQRATDLAYRIVATWGMSENVGPISVRRNINPFLGGSTVTEG--SPDLLKEIDKEVQKL 560
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
+++AY TK ++ E+K ++ V +RL++KE +D + +E+L
Sbjct: 561 LASAYEETKRVIAENKEALSSVVKRLIEKETIDCKEFVEIL 601
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 90 LSSLSGILPTLLIIGRSAEMM----GGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDV 145
+S L P LL G MM G P R FG +S AK+ V+ +V
Sbjct: 111 VSMLISWFPVLLFAGIWILMMRQMGNGGPTRAFS--FG---KSKAKVYIEEKPNVKLDNV 165
Query: 146 AGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
AG +E K E+ E + +LK+P ++ LG + PKG +
Sbjct: 166 AGMDEVKEEVAEVIEYLKDPARFRKLGGRPPKGILF 201
>sp|A6TWP7|FTSH2_ALKMQ ATP-dependent zinc metalloprotease FtsH 2 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH2 PE=3 SV=1
Length = 689
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/473 (50%), Positives = 320/473 (67%), Gaps = 16/473 (3%)
Query: 521 GGGLFGGVMESTAKLINSSDIGVR--FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKI 578
GG +S AKL + D G R F DVAG +E K E+ E V+FLKNP++YI+LGA+I
Sbjct: 139 GGNRVMSFGKSKAKL-HKDDEGKRITFDDVAGLDEEKAEVEELVDFLKNPKKYIELGARI 197
Query: 579 PKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHA 638
PKG ++ GPPGTGKT L KA AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K A
Sbjct: 198 PKGILMIGPPGTGKTYLTKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKSA 257
Query: 639 PCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLD 698
PCI+FIDEIDAVGRKRG GGH E+E TLNQLLVEMDGF ++++AATNR D+LD
Sbjct: 258 PCIIFIDEIDAVGRKRGAGLGGGHDEREQTLNQLLVEMDGFGINEGIIIVAATNRPDILD 317
Query: 699 KALLRPGRFDRQIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGAD 756
ALLRPGRFDRQ+ V APDIKGR I +VH KPL D++ L+R+ TPGFT AD
Sbjct: 318 PALLRPGRFDRQVMVGAPDIKGREQILQVHAKGKPLDEDVNLKVLARR----TPGFTPAD 373
Query: 757 IANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAV 816
I N+ NEAAL+ AR I M+ E+AI +V+AG+EKK+ V+ +E+K AYHEAGHAV
Sbjct: 374 IENLMNEAALLTARKNEKKIKMETVEEAITKVIAGLEKKSRVISEKERKLTAYHEAGHAV 433
Query: 817 AGWFLRYADPLLKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFF 875
L + DP+ +V+IIPRG+ G+ LP E +Y +K ++ + + LGGRV+E++
Sbjct: 434 VAKLLTHTDPVHQVTIIPRGRAGGFTMTLPTEDKYYVTKTEMQEHIVHLLGGRVAEKLVL 493
Query: 876 GRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF-----DMPQPGEMVLEKPYSESTA 930
I+TGA +DL++V+ A A V +GM++K+G+++F ++ + + YSE A
Sbjct: 494 HDISTGASNDLQRVSSIARAMVTQYGMSDKLGSMTFGDGDSEVFLGRDFTSKHNYSEEVA 553
Query: 931 QLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGT 983
ID E+R + AY T+ LL E+ + +A+ LLK E LD D E++ T
Sbjct: 554 AEIDQEIRKFVEEAYMLTEKLLTENMDKLHVIAQALLKLETLD-ADAFEMIFT 605
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 118 GGGLFGGVMESTAKLINSSDIGVR--FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKI 175
GG +S AKL + D G R F DVAG +E K E+ E V+FLKNP++YI+LGA+I
Sbjct: 139 GGNRVMSFGKSKAKL-HKDDEGKRITFDDVAGLDEEKAEVEELVDFLKNPKKYIELGARI 197
Query: 176 PKGAML 181
PKG ++
Sbjct: 198 PKGILM 203
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/442 (51%), Positives = 309/442 (69%), Gaps = 15/442 (3%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
+ F DVAG ++AK+E+ E V+FLKN +++ LGAKIP+G +L GPPGTGKTLLA+A AGE
Sbjct: 166 ITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGE 225
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A VPF ++SGSEF+EMFVGVG SRVRD+F A+++APCI+FIDEIDAVGR+RG GG+
Sbjct: 226 AGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGN 285
Query: 663 SEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E+E TLNQLL EMDGF + ++V+AATNR DVLD ALLRPGRFDRQ+ V PD +GR
Sbjct: 286 DEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDAALLRPGRFDRQVTVDRPDFQGRL 345
Query: 723 SIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
I KVH K L D+D + L+R+ TPGFTGAD+AN+ NEAA++AAR T I M
Sbjct: 346 EILKVHARGKTLSADVDLEKLARR----TPGFTGADLANLLNEAAILAARRNLTEISMDE 401
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLG 840
A++RV+AG EKK ++ K+ VAYHEAGHA+ G L DP+ KV+IIPRG+ G
Sbjct: 402 INDAVDRVLAGPEKKDRLMSERRKELVAYHEAGHALVGSLLPNYDPIQKVTIIPRGQAGG 461
Query: 841 YAQYLPREQY--LYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQ 896
++P + L ++ L + M + LGGRV+EE+ +G ITTGA DL++V + A
Sbjct: 462 LTWFMPSDDDMGLTTRAHLKNMMTVALGGRVAEEVVYGESEITTGAASDLQQVARIARNM 521
Query: 897 VAHFGMNEKVGNVSFDMPQPG-----EMVLEKPYSESTAQLIDNEVRSLISNAYTRTKAL 951
V FGM++++GNV+ E+ E+ +SE TA LID EVR L++ AY R L
Sbjct: 522 VTRFGMSDRLGNVALGRQYANIFLGREIAAERDFSEETAALIDEEVRRLVNEAYQRATYL 581
Query: 952 LIEHKASVEKVAERLLKKEILD 973
+ E++A ++++A RL++ E +D
Sbjct: 582 IRENRALLDRIARRLVEAETID 603
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
+ F DVAG ++AK+E+ E V+FLKN +++ LGAKIP+G +L
Sbjct: 166 ITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVLLV 208
>sp|B8J992|FTSH_ANAD2 ATP-dependent zinc metalloprotease FtsH OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=ftsH PE=3
SV=1
Length = 706
Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/505 (48%), Positives = 327/505 (64%), Gaps = 21/505 (4%)
Query: 519 RRGGGLFG----GVM---ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQY 571
RR G G GVM +S A++ D GV F+D AG +EA E+ E V FLK P++Y
Sbjct: 172 RRMSGQLGQGPPGVMAFGKSRARIHMEPDTGVTFQDAAGIDEAVEELQEIVEFLKTPEKY 231
Query: 572 IDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMF 631
LG +IPKG +L GPPGTGKTLLA+ATAGEA VPF ++SGSEF+EMFVGVG +RVRD+F
Sbjct: 232 RRLGGRIPKGVLLVGPPGTGKTLLARATAGEAGVPFFSLSGSEFVEMFVGVGAARVRDLF 291
Query: 632 SMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAAT 691
+ A + APCI+FIDE+DA+G+ R GGH E+E TLNQLL EMDGF+ ++++ AT
Sbjct: 292 AQATQKAPCIVFIDELDALGKSRNAGIMGGHDEREQTLNQLLAEMDGFDARAGLIIMGAT 351
Query: 692 NRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPG 751
NR ++LD ALLRPGRFDRQ+ V PD +GR I ++H + +K D D R +AA TPG
Sbjct: 352 NRPEILDPALLRPGRFDRQVLVDRPDKRGREQILRIHARNVKLGPDVD--LRSVAARTPG 409
Query: 752 FTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHE 811
F GAD+ANV NEAAL+AAR + FE+AIERVVAG+EKK+ + EK+ VA+HE
Sbjct: 410 FAGADLANVVNEAALLAARRNKNHVTRAEFEEAIERVVAGLEKKSRRINEREKEIVAFHE 469
Query: 812 AGHAVAGWFLRYADPLLKVSIIPRGKG-LGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRV 869
AGHA+ W L +AD + KVSIIPRG G LGY LP E +YL ++ +L DRM +GGRV
Sbjct: 470 AGHALVSWMLPFADRVSKVSIIPRGLGALGYTLQLPLEDRYLLTRSELRDRMAGLMGGRV 529
Query: 870 SEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF-DMPQPGEMVLE----KP 924
+EE FG +TGA +DL+ T A V +GM+ +G VS D P + ++ +
Sbjct: 530 AEEEVFGEPSTGASNDLQHATAVARMMVRDYGMSPALGPVSLGDQNGPSFLGVKGFETRS 589
Query: 925 YSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTR 984
YS+ TA +D EV++L+ A R + ++ EH+ +E +A RLL E+++ +++ L G
Sbjct: 590 YSDHTALAVDREVQALVEEAQDRARTVVREHRERLEALAARLLTIEVVEEDEITRLWGP- 648
Query: 985 PFPEKSTYEEFVEGTGSFEEDTSLP 1009
K +EG G E P
Sbjct: 649 ----KVVRPGTIEGRGHEESPPETP 669
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 116 RRGGGLFG----GVM---ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQY 168
RR G G GVM +S A++ D GV F+D AG +EA E+ E V FLK P++Y
Sbjct: 172 RRMSGQLGQGPPGVMAFGKSRARIHMEPDTGVTFQDAAGIDEAVEELQEIVEFLKTPEKY 231
Query: 169 IDLGAKIPKGAMLT 182
LG +IPKG +L
Sbjct: 232 RRLGGRIPKGVLLV 245
>sp|Q3JMH0|FTSH_BURP1 ATP-dependent zinc metalloprotease FtsH OS=Burkholderia
pseudomallei (strain 1710b) GN=ftsH PE=3 SV=2
Length = 666
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/484 (48%), Positives = 328/484 (67%), Gaps = 12/484 (2%)
Query: 515 LIIGRRGGGL--FGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYI 572
L++ R GGL + GV +S ++ + G+ F D+AG +EAK E+ + V FL+ P +Y
Sbjct: 137 LMLRRPRGGLQDWSGVGKSKPRVYVEAKTGIDFDDIAGIDEAKAELQQIVAFLRAPARYQ 196
Query: 573 DLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFS 632
LG KIPKG ++ G PGTGKTLLAKA AGEA VPF + SGS F+EMFVGVG +RVRD+F
Sbjct: 197 RLGGKIPKGVLIVGAPGTGKTLLAKAVAGEAGVPFFSTSGSSFVEMFVGVGAARVRDLFE 256
Query: 633 MARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATN 692
A++ APCI+FIDE+DA+G+ RG G+ E+E TLNQLLVEMDGF + V+++AATN
Sbjct: 257 QAQQKAPCIIFIDELDALGKVRGAGLASGNDEREQTLNQLLVEMDGFQANSGVILMAATN 316
Query: 693 RVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGF 752
R ++LD ALLRPGRFDR I + PD+ GR I VH+K +K D D +LA+ TPGF
Sbjct: 317 RPEILDPALLRPGRFDRHIAIDRPDLTGRRQILSVHVKHVKLGPDVD--LGELASRTPGF 374
Query: 753 TGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEA 812
GAD+AN+ NEAAL AA I M F++AI+R + GME+K+ V+ EK T+A+HEA
Sbjct: 375 VGADLANIVNEAALHAAELDKPAIDMSDFDEAIDRAMTGMERKSRVMSEREKITIAHHEA 434
Query: 813 GHAVAGWFLRYADPLLKVSIIPRG-KGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVS 870
GHA+ ++DP+ KVSIIPRG LGY Q +P E +Y+ K +LLDR+ + LGGRV+
Sbjct: 435 GHALIAQTRAHSDPVKKVSIIPRGIAALGYTQQVPTEDRYVLRKSELLDRLDVLLGGRVA 494
Query: 871 EEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF---DMPQPGEMVLEK---P 924
EEI FG ++TGAE+DL++ T+ A VA +GM+E++G +F D +V ++
Sbjct: 495 EEIVFGDVSTGAENDLERATEMARHMVARYGMSERIGLATFGDADTQGLSPLVWQRGGER 554
Query: 925 YSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTR 984
SESTA ID+E++ L++ A+ R L E + ++E++A LL+ E++D + ++ L+
Sbjct: 555 CSESTATRIDDEIQRLLAEAHDRVSRTLKERRGALERIAGYLLEHEVVDHDKLVRLVNDE 614
Query: 985 PFPE 988
P PE
Sbjct: 615 PTPE 618
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 119 GGL--FGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIP 176
GGL + GV +S ++ + G+ F D+AG +EAK E+ + V FL+ P +Y LG KIP
Sbjct: 144 GGLQDWSGVGKSKPRVYVEAKTGIDFDDIAGIDEAKAELQQIVAFLRAPARYQRLGGKIP 203
Query: 177 KGAMLT 182
KG ++
Sbjct: 204 KGVLIV 209
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/453 (51%), Positives = 313/453 (69%), Gaps = 14/453 (3%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A++I D V F DVAG +E K E+ E V FLK P+++++LGA+IPKG +L GPPG
Sbjct: 145 KSRARMITDKDKRVTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLVGPPG 204
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF ++SGS+F+EMFVGVG +RVRD+F A+K+APCI+FIDEIDA
Sbjct: 205 TGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDA 264
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQLLVEMDGF+ ++V+AATNR D+LD ALLRPGRFDR
Sbjct: 265 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFSVNEGIIVIAATNRPDILDPALLRPGRFDR 324
Query: 710 QIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
I V PDIKGR I K+H KPL D+ L+R+ TPGFTGAD+ N+ NEAAL+
Sbjct: 325 HITVGIPDIKGREEILKIHSRNKPLAPDVSLQVLARR----TPGFTGADLENLMNEAALL 380
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR I M E+AI RV+AG EK++ ++ ++KK VAYHEAGHAV L P+
Sbjct: 381 AARRGLKQITMAELEEAITRVIAGPEKRSRIMSEKDKKLVAYHEAGHAVVAKLLPNTPPV 440
Query: 828 LKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDL 886
+V+IIPRG+ GY LP E +Y SK +++D + LGGRV+E + I+TGA++D+
Sbjct: 441 HEVTIIPRGRAGGYTMLLPEEDKYYMSKSEMMDEIVHLLGGRVAESLVLNDISTGAQNDI 500
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVRSL 940
++ T A V +GM+E++G ++F + E+ L + YSE A ID E++ +
Sbjct: 501 ERATNIARKMVTEYGMSERLGPMTFGT-KSEEVFLGRDLGRTRNYSEEVAAEIDREIKRI 559
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILD 973
I AY R ++LL E+ + +VA+ L++KE L+
Sbjct: 560 IEEAYKRAESLLKENIDKLHRVAKALIEKEKLN 592
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
+S A++I D V F DVAG +E K E+ E V FLK P+++++LGA+IPKG +L
Sbjct: 145 KSRARMITDKDKRVTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLV 200
>sp|Q4L3G8|FTSH_STAHJ ATP-dependent zinc metalloprotease FtsH OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ftsH PE=3 SV=1
Length = 727
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/511 (46%), Positives = 338/511 (66%), Gaps = 26/511 (5%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S AK+ ++ VRF DVAG +E K E++E V+FLK+ +++ +G++IPKG +L GPPGT
Sbjct: 150 SKAKMYDNQKRRVRFSDVAGADEEKQELIEIVDFLKDNKKFKQMGSRIPKGVLLVGPPGT 209
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTLLA+A AGEA PF ++SGS+F+EMFVGVG SRVRD+F A+K+APCI+FIDEIDAV
Sbjct: 210 GKTLLARAVAGEAGAPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAV 269
Query: 651 GRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQ 710
GR+RG GGH E+E TLNQLLVEMDGF ++++AATNR D+LD ALLRPGRFDRQ
Sbjct: 270 GRQRGAGVGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQ 329
Query: 711 IFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIA 768
I V PD+KGR +I VH KPL +D +S++ TPGF+GAD+ N+ NEA+LIA
Sbjct: 330 IQVGRPDVKGREAILHVHSKNKPLDETVDLKAISQR----TPGFSGADLENLLNEASLIA 385
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
AR+ I M+ E+A +RV+AG KK+ V+ +E+ VA+HEAGH V G L A+ +
Sbjct: 386 AREGKNKIDMRDIEEATDRVIAGPAKKSRVISDKERNIVAHHEAGHTVIGMVLDEAEVVH 445
Query: 829 KVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLK 887
KV+I+PRG+ GYA LP++ ++L ++ +LLD++C LGGRVSE+I F ++TGA +D +
Sbjct: 446 KVTIVPRGQAGGYAMMLPKQDRFLMTEPELLDKICGLLGGRVSEDINFHEVSTGASNDFE 505
Query: 888 KVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVRSLI 941
+ TQ A + V +GM++K+G + F G++ L E YS A ID EV+ +I
Sbjct: 506 RATQIARSMVTEYGMSKKLGPLQFSSSGGGQVFLGKDMQGEPNYSGQIAYEIDKEVQRII 565
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPE---------KSTY 992
Y R K +L++H+ ++ +A+ LL +E L + L PE K
Sbjct: 566 KEQYERCKQILLDHEKELKLIAKTLLTEETLVAEQIRSLFYDGVLPEVDYDAARVVKDED 625
Query: 993 EEFVEGT--GSFEE--DTSLPEGLKDWNKDK 1019
++ EG S+++ + L EG +D +D+
Sbjct: 626 SDYSEGKYGKSYDDIREEQLEEGKEDMREDR 656
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 128 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
S AK+ ++ VRF DVAG +E K E++E V+FLK+ +++ +G++IPKG +L
Sbjct: 150 SKAKMYDNQKRRVRFSDVAGADEEKQELIEIVDFLKDNKKFKQMGSRIPKGVLLV 204
>sp|Q4UN68|FTSH_RICFE ATP-dependent zinc metalloprotease FtsH OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=ftsH PE=3 SV=1
Length = 635
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/578 (44%), Positives = 354/578 (61%), Gaps = 30/578 (5%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELA 482
IT+ DF+ V K VN ++ +++ G S DG+ F + D R L
Sbjct: 37 ITFSDFLTRVDEK-------TVNSVKIQGRVIEGTSNDGSTFNTYAPDYPDLVNR---LT 86
Query: 483 QAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIG--------RRGGGLFGGVMESTAK 534
++I+ +P+ + L L P LL+IG GGG G +S A+
Sbjct: 87 SNDVNIE---VVPLETRMNTFLGFLISWFPMLLLIGVWVFFMRQMHGGGKAMGFGKSKAR 143
Query: 535 LINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTL 594
L++ + FKDVAG +EAK E+ E V+FL++P ++ LG KIPKG +L GPPGTGKTL
Sbjct: 144 LLSDKGPKITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTL 203
Query: 595 LAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKR 654
LAKA AGEANVPF ++SGS+F+EMFVGVG SRVRDMF +++APCI+FIDEIDAVGR R
Sbjct: 204 LAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHR 263
Query: 655 GGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVP 714
G GG+ E+E TLNQ+LVEMDGF VV++AATNR DVLD+ALLRPGRFDRQI V
Sbjct: 264 GIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVA 323
Query: 715 APDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHT 774
PDI GR I KVHLK +K + L+R +A TPGF+GA++AN+ NEAALIAAR
Sbjct: 324 NPDINGREQILKVHLKKIK--YNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKK 381
Query: 775 TIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIP 834
+ M E+A ++V+ G+ +++ + +EK+ AYHE GHA+ G + A PL K +IIP
Sbjct: 382 EVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPLHKATIIP 441
Query: 835 RGKGLGYAQYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDDLKKVTQ 891
RG LG Q LP ++Y ++EQ+ + + + GRV+EEI FGR +T+GA D+K T
Sbjct: 442 RGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATN 501
Query: 892 SAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKP---YSESTAQLIDNEVRSLISNAYTRT 948
A A V G+++ +G + F +M +P SE+TA+LID EV+ +I+ Y
Sbjct: 502 IARAMVTKAGLSDLIGPI-FHGSSSDDMYGRQPSNETSEATAELIDAEVKKIITQGYEFA 560
Query: 949 KALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPF 986
K +L +H + +A L++ E L + LL R
Sbjct: 561 KDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRAL 598
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELA 68
IT+ DF+ V K VN ++ +++ G S DG+ F + D R L
Sbjct: 37 ITFSDFLTRVDEK-------TVNSVKIQGRVIEGTSNDGSTFNTYAPDYPDLVNR---LT 86
Query: 69 QAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMGGRPGRRGGGLFGGVMES 128
++I+ +P+ + L L P LL+IG M GGG G +S
Sbjct: 87 SNDVNIE---VVPLETRMNTFLGFLISWFPMLLLIGVWVFFM---RQMHGGGKAMGFGKS 140
Query: 129 TAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
A+L++ + FKDVAG +EAK E+ E V+FL++P ++ LG KIPKG +L
Sbjct: 141 KARLLSDKGPKITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLL 193
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/448 (49%), Positives = 319/448 (71%), Gaps = 13/448 (2%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V FKDV G EEA E+ E V FLK+P ++ +GA++PKG +L GPPGTGKTLLA+A AGE
Sbjct: 158 VTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGE 217
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
ANVPF +SGS+F+E+FVGVG +RVRD+F+ A+ HAPCI+FIDEIDAVGR RG GGH
Sbjct: 218 ANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHRGAGLGGGH 277
Query: 663 SEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E+E TLNQLLVEMDGF++ ++V+AATNR D+LD ALLRPGRFD++I V PD+ GR
Sbjct: 278 DEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRK 337
Query: 723 SIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
I ++H KPL D++ + ++++ TPGF GAD+ N+ NEAAL+AAR+ I MK
Sbjct: 338 KILEIHTRNKPLAEDVNLEIIAKR----TPGFVGADLENLVNEAALLAAREGRDKITMKD 393
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRG-KGL 839
FE+AI+RV+AG +K+ ++ P+EK+ +AYHEAGHAV + +P+ ++SIIPRG K L
Sbjct: 394 FEEAIDRVIAGPARKSKLISPKEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKAL 453
Query: 840 GYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVA 898
GY +LP E +YL S+ +LLD++ LGGR +EE+ FG +T+GA +D+++ T+ A V
Sbjct: 454 GYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVC 513
Query: 899 HFGMNEKVGNVSFDMPQP-----GEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLI 953
GM+E++G +++ + E+ + YSE A ID EV+ +++N Y R K ++
Sbjct: 514 QLGMSEELGPLAWGKEEQEVFLGKEITRLRNYSEEVASKIDEEVKKIVTNCYERAKEIIR 573
Query: 954 EHKASVEKVAERLLKKEILDRNDMIELL 981
+++ ++ + E LL+KE ++ +++ +L
Sbjct: 574 KYRKQLDNIVEILLEKETIEGDELRRIL 601
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 90 LSSLSGILPTLLIIGRSAEMMGGRPGRRGGGLFGGVMESTAKLIN-SSDIGVRFKDVAGC 148
++ L ++PT+L I +M GR +S A + S + V FKDV G
Sbjct: 109 INVLGTLIPTILFIVVWLFIMRSLSGRNNQAF--TFTKSRATMYKPSGNKRVTFKDVGGA 166
Query: 149 EEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
EEA E+ E V FLK+P ++ +GA++PKG +L
Sbjct: 167 EEAIEELKEVVEFLKDPSKFNRIGARMPKGILLV 200
>sp|D5HA94|FTSH2_SALRM ATP-dependent zinc metalloprotease FtsH 2 OS=Salinibacter ruber
(strain M8) GN=ftsH2 PE=3 SV=1
Length = 683
Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/493 (47%), Positives = 327/493 (66%), Gaps = 23/493 (4%)
Query: 507 LSGILPTLLIIG------RR----GGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAKV 556
+ G+LP LL+ G RR G GLF V +S A+L + + F DVAG + AK
Sbjct: 140 IMGLLPVLLLFGVGYIFLRRMQSQGQGLFS-VRQSKAELYDKDEEDTTFDDVAGADSAKE 198
Query: 557 EIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFL 616
E+ E + FLKNP+++ LG K+PKG +L GPPGTGKTLLA+A AGEAN PF +VSGS+F+
Sbjct: 199 ELREIIKFLKNPKRFEGLGGKVPKGVLLVGPPGTGKTLLARAVAGEANAPFFSVSGSDFM 258
Query: 617 EMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEM 676
EMFVGVG SRVRDMFS A++ +P I+FIDE+D++GRKRG GG+ E+E TLNQLL E+
Sbjct: 259 EMFVGVGASRVRDMFSEAKETSPAIIFIDELDSIGRKRGAGLGGGNDEREQTLNQLLSEL 318
Query: 677 DGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHL--KPLKT 734
DGF V+V+AATNR D+LD AL RPGRFDRQI V P + R I K+H KPL
Sbjct: 319 DGFEENEGVIVMAATNRPDILDSALTRPGRFDRQITVDLPTKQSRHEILKIHAREKPLSD 378
Query: 735 DLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEK 794
D+D ++++R TPGF+GAD+ N+ NEAAL+A R H I EQA ++V+ G+++
Sbjct: 379 DVDLEEIARS----TPGFSGADLENLLNEAALLAGRHGHDAIQYSDIEQARDKVMMGLKR 434
Query: 795 KTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQYLP-REQYLYS 853
VL EEKK +AYHEAGHA+ G L ADP+ KV+I+PRGK +G Q LP ++QYLY
Sbjct: 435 DGMVLDDEEKKLLAYHEAGHAIVGAVLPNADPVHKVTIVPRGKAMGVTQQLPEKDQYLYR 494
Query: 854 KEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDM 913
+ +LDR+ + +GGR +EE+ F T+GAE+DLK+V + A V +GM ++ ++S
Sbjct: 495 HDYILDRLAVIMGGRAAEELIFDTATSGAENDLKQVRKMARKMVLDWGMGDQFKHISLGE 554
Query: 914 PQPG-----EMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLK 968
Q E+ + YS+ TA+ +D E+R + +A+ R L EH + +++A+ L++
Sbjct: 555 DQGNVFLGDEIAKGREYSDDTAREVDEEIRRISEDAFQRAVDTLNEHHEAFDQLADMLIE 614
Query: 969 KEILDRNDMIELL 981
+E + D++ L+
Sbjct: 615 QEEVSGKDVLNLV 627
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 93 LSGILPTLLIIGRSAEMMGGRPGRRGGGLFGGVMESTAKLINSSDIGVRFKDVAGCEEAK 152
+ G+LP LL+ G + R +G GLF V +S A+L + + F DVAG + AK
Sbjct: 140 IMGLLPVLLLFGVGYIFLR-RMQSQGQGLFS-VRQSKAELYDKDEEDTTFDDVAGADSAK 197
Query: 153 VEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
E+ E + FLKNP+++ LG K+PKG +L
Sbjct: 198 EELREIIKFLKNPKRFEGLGGKVPKGVLLV 227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 404,485,938
Number of Sequences: 539616
Number of extensions: 18900973
Number of successful extensions: 99303
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 1408
Number of HSP's that attempted gapping in prelim test: 87425
Number of HSP's gapped (non-prelim): 8977
length of query: 1036
length of database: 191,569,459
effective HSP length: 128
effective length of query: 908
effective length of database: 122,498,611
effective search space: 111228738788
effective search space used: 111228738788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)