Your job contains 1 sequence.
>psy5440
MYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDS
FERNLELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMGGRPGRRGGG
LFGGVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM
LTERNKSRMAQRMLCTAKKLERFLLHNINHGRYSSFHINNSLATLPKSNFPPTTVESVLH
QWRIILSENVPKGFEKFYPDKNKKSAEKPKEEGKPSDSTQPPLSKPDLSSSRSGSSPWNM
GVFGGGGGKWRIILSENVPKGFEKFYPDKNKKSAEKPKEEGKPSDSTQPPLSKPDLSSSR
SGSSPWNMGVFGGGGGKGGQGSGGKGFGDFSGGDKEKYFMYGLIGSVAVLAAAVMYEMNY
KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE
LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRRGGGLFGGVMESTAKLINSSD
IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATA
GEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG
GHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDVLDKALLRPGRFDRQIFVPAPDIKG
RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH
FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLG
YAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHF
GMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVE
KVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEEDTSLPEGLKDWNKDKE
VPKKTEEKEEKKAKSS
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5440
(1036 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 2066 5.1e-276 2
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 2013 1.2e-256 2
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 2019 8.2e-256 2
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 2012 2.2e-255 2
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 2012 2.2e-255 2
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 2013 4.5e-255 2
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 2010 4.5e-255 2
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 1950 1.4e-240 2
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 1869 1.1e-238 2
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 2213 8.3e-234 2
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 2213 2.3e-229 1
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 2118 3.1e-223 2
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 2117 4.0e-223 2
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 1993 4.7e-206 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 1434 9.1e-176 3
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 1435 4.6e-174 2
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 1418 1.7e-172 3
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 1629 1.8e-167 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 1460 5.0e-166 2
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 1443 4.1e-162 2
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 776 2.6e-161 3
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 776 2.6e-161 3
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 1511 5.6e-155 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 1218 4.6e-148 2
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 1414 1.4e-146 2
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 1431 1.7e-146 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 1185 1.0e-143 2
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 1185 1.8e-142 2
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 1182 6.2e-142 2
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 1178 1.0e-141 2
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 1181 1.7e-141 2
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 1183 1.2e-138 2
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 1197 1.3e-137 2
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 1130 6.2e-129 2
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 1130 6.2e-129 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 1032 2.0e-117 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 1032 2.0e-117 2
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 597 2.1e-116 3
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 597 2.1e-116 3
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 1138 1.9e-115 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 1133 6.4e-115 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 1130 1.3e-114 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 1107 3.6e-112 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 1072 1.9e-108 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 1067 6.3e-108 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 1067 6.3e-108 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 1065 1.0e-107 1
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 1064 1.3e-107 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 1057 7.2e-107 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 1054 1.5e-106 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 946 2.4e-106 2
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 946 2.4e-106 2
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 1050 4.0e-106 1
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 1047 8.3e-106 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 1047 8.3e-106 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 1041 3.6e-105 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 1041 3.6e-105 1
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 929 5.8e-105 2
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 1033 2.5e-104 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 1030 5.3e-104 1
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 925 6.5e-104 2
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 1022 3.7e-103 1
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 905 9.5e-103 2
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 1015 2.0e-102 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 907 5.2e-102 2
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 902 1.4e-101 2
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 1006 1.8e-101 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 1005 2.3e-101 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 900 1.2e-100 2
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 889 6.7e-100 2
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 889 6.7e-100 2
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 889 6.7e-100 2
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 991 7.1e-100 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 888 8.6e-100 2
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 888 8.6e-100 2
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 866 2.1e-99 3
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 881 4.7e-99 2
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 870 4.7e-99 2
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 870 4.7e-99 2
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 878 9.7e-99 2
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 878 3.3e-98 2
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 878 3.3e-98 2
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 842 6.1e-95 2
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 939 2.3e-94 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 843 3.0e-93 2
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 846 3.8e-93 2
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 927 4.3e-93 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 923 1.1e-92 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 895 3.4e-92 2
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 917 5.0e-92 1
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 648 1.8e-70 2
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 663 1.3e-66 2
RGD|1305259 - symbol:Afg3l2 "AFG3 ATPase family member 3-... 645 3.4e-63 1
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 617 6.6e-60 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 585 2.4e-58 2
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 612 6.1e-58 1
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 588 2.5e-55 2
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 599 3.4e-55 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 555 5.3e-53 1
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 500 5.3e-47 1
WARNING: Descriptions of 581 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 2066 (732.3 bits), Expect = 5.1e-276, Sum P(2) = 5.1e-276
Identities = 397/489 (81%), Positives = 435/489 (88%)
Query: 528 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 587
VM+STAKL N ++IGV FKDVAGCEEAK+EIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP
Sbjct: 310 VMQSTAKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 369
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMF+MARKHAPCILFIDEI
Sbjct: 370 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEI 429
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DAVGRKRGG+ FGGHSEQENTLNQLLVEMDGF D+LDKAL+RPGRF
Sbjct: 430 DAVGRKRGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRF 489
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
DRQI+VPAPDIKGRASIFKVHL LKT LD+++LSRK+AALTPGFTGADIANVCNEAALI
Sbjct: 490 DRQIYVPAPDIKGRASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALI 549
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AARD +IV+KHFEQAIERV+AGMEKKTNVL PEEK+TVA+HEAGHAVAGWFL +ADPL
Sbjct: 550 AARDSKDSIVLKHFEQAIERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPL 609
Query: 828 LKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLK 887
LKVSIIPRGKGLGYAQYLP++ YL SKEQL DRMCMTLGGRV+EE+FF RITTGA+DDLK
Sbjct: 610 LKVSIIPRGKGLGYAQYLPKDHYLLSKEQLFDRMCMTLGGRVAEELFFNRITTGAQDDLK 669
Query: 888 KVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTR 947
K+T AY+QV FGMNEKVG VSFD+ Q G+ V KPYSE TAQLIDNEVRS+I A+
Sbjct: 670 KITDIAYSQVVRFGMNEKVGQVSFDVGQAGDPVFSKPYSEDTAQLIDNEVRSIIKCAHEA 729
Query: 948 TKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEEDTS 1007
T +LL +HK +V+KVAERLL+ E+L R+DMIELLG RPF EKSTYEEFVEGTGSFEEDT+
Sbjct: 730 TTSLLTKHKENVQKVAERLLQNEVLSRDDMIELLGPRPFKEKSTYEEFVEGTGSFEEDTT 789
Query: 1008 LPEGLKDWN 1016
LPEGLK WN
Sbjct: 790 LPEGLKSWN 798
Score = 611 (220.1 bits), Expect = 5.1e-276, Sum P(2) = 5.1e-276
Identities = 122/188 (64%), Positives = 146/188 (77%)
Query: 2 YEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSF 61
+EM YKEI+WK+F+N+ L+KG+VEKLEVVNKKWVRV+L NS G+ LWFNIGSVDSF
Sbjct: 181 FEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQ-NSNSGSGVLWFNIGSVDSF 239
Query: 62 ERNLELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIG-------RSAEMMXXXX 114
ERNLE AQ + + N++PVIY+ E+E +SL+G+LPTLLIIG +SA+MM
Sbjct: 240 ERNLEAAQTEQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLVYMMRKSADMMGGGR 299
Query: 115 XXXXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
VM+STAKL N ++IGV FKDVAGCEEAK+EIMEFVNFLKNPQQYIDLGAK
Sbjct: 300 GRKGGGLFGGVMQSTAKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAK 359
Query: 175 IPKGAMLT 182
IPKGAMLT
Sbjct: 360 IPKGAMLT 367
Score = 346 (126.9 bits), Expect = 8.1e-253, Sum P(3) = 8.1e-253
Identities = 63/113 (55%), Positives = 87/113 (76%)
Query: 396 EKYFMYGLIGSVAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLP 455
E++ + G IG+V ++ + +EM YKEI+WK+F+N+ L+KG+VEKLEVVNKKWVRV+L
Sbjct: 161 ERWILLGAIGAVVLVGSFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQ 220
Query: 456 GNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIELSSLS 508
NS G+ LWFNIGSVDSFERNLE AQ + + N++PVIY+ E+E +SL+
Sbjct: 221 -NSNSGSGVLWFNIGSVDSFERNLEAAQTEQGTESINFVPVIYRNEVEAASLT 272
Score = 63 (27.2 bits), Expect = 8.1e-253, Sum P(3) = 8.1e-253
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 189 MAQRMLCTAKKLERFLLHNINHGRYSSFHINNSL-ATLPKSNFPPTTVESVLHQW--RI- 244
MA R+L TAK + + N G + AT PT + +L +I
Sbjct: 1 MAFRLLGTAKTMAGMMRRNYTAGSLPGKGQRTHMGATGAGVYILPTELSPLLRYVVKQIQ 60
Query: 245 ILSENVPKGFEKFYPDKNKKSAEKPK 270
+L + PKGFEK++ + KS+ +PK
Sbjct: 61 LLCKKPPKGFEKYF-EAGGKSSGQPK 85
Score = 55 (24.4 bits), Expect = 5.6e-252, Sum P(3) = 5.6e-252
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 313 ILSENVPKGFEKFYPDKNKKSAEKPK 338
+L + PKGFEK++ + KS+ +PK
Sbjct: 61 LLCKKPPKGFEKYF-EAGGKSSGQPK 85
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 2013 (713.7 bits), Expect = 1.2e-256, Sum P(2) = 1.2e-256
Identities = 390/491 (79%), Positives = 434/491 (88%)
Query: 528 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 587
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LTGP
Sbjct: 286 VSETTAKVLRD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGP 344
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKTLLAKATAGEANVPFITV+GSEFLEMFVGVGP+RVRD+F +ARK+APCILFIDEI
Sbjct: 345 PGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEI 404
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DAVGRKRG NFGG SEQENTLNQLLVEMDGF D+LD AL+RPGRF
Sbjct: 405 DAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRF 464
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLK--TDLDRDDLSRKLAALTPGFTGADIANVCNEAA 765
DRQI++ PDIKGRASIFKVHL+PLK +LD++ L+RK+AALTPGF+GADIANVCNEAA
Sbjct: 465 DRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAA 524
Query: 766 LIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYAD 825
LIAAR L I KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGWFL +AD
Sbjct: 525 LIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHAD 584
Query: 826 PLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
PLLKVSIIPRGKGLGYAQYLP+EQYLY+KEQLLDRMCMTLGGRVSEEIFFGRITTGA+DD
Sbjct: 585 PLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDD 644
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
LKKVTQSAYAQ+ FGMNEKVG VSFD+P+ GE+VLEKPYSE+TA+LID EVR+LIS AY
Sbjct: 645 LKKVTQSAYAQIVQFGMNEKVGQVSFDLPRQGELVLEKPYSEATARLIDTEVRNLISTAY 704
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEED 1005
RT+ LL + K VEKVA RLL+KE+LD+NDM+ELLG RPF EKSTYEEFVEGTGS +ED
Sbjct: 705 ERTQQLLSDKKPEVEKVALRLLEKEVLDKNDMVELLGKRPFAEKSTYEEFVEGTGSVDED 764
Query: 1006 TSLPEGLKDWN 1016
TSLPEGLKDWN
Sbjct: 765 TSLPEGLKDWN 775
Score = 1035 (369.4 bits), Expect = 1.7e-109, Sum P(2) = 1.7e-109
Identities = 222/387 (57%), Positives = 270/387 (69%)
Query: 396 EKYFMYGLIGSVAVLAAAVMYEMNY--KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKL 453
+++ MY L G+ LA + + +E+TWKDF+N+ L KG+V++LEVVNK++V+V
Sbjct: 136 KEFRMYFLGGTAFWLAMGYYFFIRDGGREVTWKDFVNSYLAKGVVDRLEVVNKRYVKVIF 195
Query: 454 LPGNS-MDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE----LSSLS 508
PG + +DG ++WFNIGSVD+FERNLE AQ ++ I+ N LPV+Y E + LS L
Sbjct: 196 TPGKTPVDG-QYVWFNIGSVDTFERNLETAQLELGIEGENRLPVVYSAESDGSFLLSMLP 254
Query: 509 XXXX------------XXXXXXXXXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKV 556
V E+TAK++ +I V+FKDVAGCEEAK+
Sbjct: 255 TVLIIGFLLFMLRRGPAGAGRPGRGMGGLFSVSETTAKVLRD-EIDVKFKDVAGCEEAKL 313
Query: 557 EIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFL 616
EIMEFVNFLKNP+QY DLGAKIPKGA+LTGPPGTGKTLLAKATAGEANVPFITV+GSEFL
Sbjct: 314 EIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFL 373
Query: 617 EMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEM 676
EMFVGVGP+RVRD+F +ARK+APCILFIDEIDAVGRKRG NFGG SEQENTLNQLLVEM
Sbjct: 374 EMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEM 433
Query: 677 DGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDL 736
DGF D+LD AL+RPGRFDRQI++ PDIKGRASIFKVHL+PLK +
Sbjct: 434 DGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLEA 493
Query: 737 DRDDLSRKLAALTPGFT-GADIANVCN 762
+ D LA T G A++ N
Sbjct: 494 ELD--KEALARKMAALTPGFSGADIAN 518
Score = 481 (174.4 bits), Expect = 1.2e-256, Sum P(2) = 1.2e-256
Identities = 100/182 (54%), Positives = 131/182 (71%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFNIGSVDSFERNL 65
+E+TWKDF+N+ L KG+V++LEVVNK++V+V PG + +DG ++WFNIGSVD+FERNL
Sbjct: 163 REVTWKDFVNSYLAKGVVDRLEVVNKRYVKVIFTPGKTPVDG-QYVWFNIGSVDTFERNL 221
Query: 66 ELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXX-----X 120
E AQ ++ I+ N LPV+Y E + S L +LPT+LIIG M+
Sbjct: 222 ETAQLELGIEGENRLPVVYSAESDGSFLLSMLPTVLIIGFLLFMLRRGPAGAGRPGRGMG 281
Query: 121 XXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM 180
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+
Sbjct: 282 GLFSVSETTAKVLRD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 340
Query: 181 LT 182
LT
Sbjct: 341 LT 342
Score = 67 (28.6 bits), Expect = 7.2e-213, Sum P(2) = 7.2e-213
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 235 VESVLHQWRIILSENVPKGFEKFYPDKNKKSAEKPKEEGKPSDS 278
+ VL +R LS PKGFEK++P+ NK K E PS++
Sbjct: 46 LSQVLGTYRR-LSSKPPKGFEKYFPN-NKNGGPK-NSEPTPSNA 86
Score = 66 (28.3 bits), Expect = 9.2e-213, Sum P(2) = 9.2e-213
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 314 LSENVPKGFEKFYPDKNKKSAEKPKEEGKPSDS 346
LS PKGFEK++P+ NK K E PS++
Sbjct: 56 LSSKPPKGFEKYFPN-NKNGGPK-NSEPTPSNA 86
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 2019 (715.8 bits), Expect = 8.2e-256, Sum P(2) = 8.2e-256
Identities = 391/491 (79%), Positives = 437/491 (89%)
Query: 528 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 587
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LTGP
Sbjct: 291 VGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGP 349
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+APCILFIDEI
Sbjct: 350 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEI 409
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DAVGRKRG NFGG SEQENTLNQLLVEMDGF D+LD ALLRPGRF
Sbjct: 410 DAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRF 469
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNEAA 765
DRQIF+ PDIKGRASIFKVHL+PLK D L++D L+RKLA+LTPGF+GAD+ANVCNEAA
Sbjct: 470 DRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAA 529
Query: 766 LIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYAD 825
LIAAR L +I KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGW+L +AD
Sbjct: 530 LIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 589
Query: 826 PLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
PLLKVSIIPRGKGLGYAQYLP+EQYLY+KEQLLDRMCMTLGGRVSEEIFFGRITTGA+DD
Sbjct: 590 PLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDD 649
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L+KVTQSAYAQ+ FGMNEKVG +SFD+P+ G+MVLEKPYSE+TA+LID+EVR LI++AY
Sbjct: 650 LRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAY 709
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEED 1005
RT ALL E KA VEKVA LL+KE+LD+NDM+ELLG RPF EKSTYEEFVEGTGS +ED
Sbjct: 710 KRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDED 769
Query: 1006 TSLPEGLKDWN 1016
TSLPEGLKDWN
Sbjct: 770 TSLPEGLKDWN 780
Score = 1041 (371.5 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 222/360 (61%), Positives = 259/360 (71%)
Query: 421 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFNIGSVDSFERNL 479
+EITWKDF+NN L+KG+V++LEVVNK++VRV PG + +DG ++WFNIGSVD+FERNL
Sbjct: 168 REITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDG-QYVWFNIGSVDTFERNL 226
Query: 480 ELAQAQMHIDPANYLPVIYKTEIE----LSSLSXXXXXXXXXXXXXXXXXX--------- 526
E Q ++ I+ N +PV+Y E + LS L
Sbjct: 227 ETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMG 286
Query: 527 ---XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM 583
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+
Sbjct: 287 GLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 345
Query: 584 LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILF 643
LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+APCILF
Sbjct: 346 LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILF 405
Query: 644 IDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLR 703
IDEIDAVGRKRG NFGG SEQENTLNQLLVEMDGF D+LD ALLR
Sbjct: 406 IDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLR 465
Query: 704 PGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFT-GADIANVCN 762
PGRFDRQIF+ PDIKGRASIFKVHL+PLK D + KLA T G A+V N
Sbjct: 466 PGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLE--KDKLARKLASLTPGFSGADVAN 523
Score = 467 (169.5 bits), Expect = 8.2e-256, Sum P(2) = 8.2e-256
Identities = 99/182 (54%), Positives = 129/182 (70%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFNIGSVDSFERNL 65
+EITWKDF+NN L+KG+V++LEVVNK++VRV PG + +DG ++WFNIGSVD+FERNL
Sbjct: 168 REITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDG-QYVWFNIGSVDTFERNL 226
Query: 66 ELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXXXXXX-- 123
E Q ++ I+ N +PV+Y E + S L +LPT+LII +
Sbjct: 227 ETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMG 286
Query: 124 ---XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM 180
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+
Sbjct: 287 GLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 345
Query: 181 LT 182
LT
Sbjct: 346 LT 347
Score = 79 (32.9 bits), Expect = 9.0e-215, Sum P(2) = 9.0e-215
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 251 PKGFEKFYPD-KNKKSAEKPKE------EGKPSDSTQ 280
PKGFEK++P+ KN K A +PKE E KP+ +T+
Sbjct: 70 PKGFEKYFPNGKNGKKASEPKEVMGEKKESKPAATTR 106
Score = 79 (32.9 bits), Expect = 9.0e-215, Sum P(2) = 9.0e-215
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 319 PKGFEKFYPD-KNKKSAEKPKE------EGKPSDSTQ 348
PKGFEK++P+ KN K A +PKE E KP+ +T+
Sbjct: 70 PKGFEKYFPNGKNGKKASEPKEVMGEKKESKPAATTR 106
Score = 38 (18.4 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 249 NVPKGFEKFYPDKNKKSAEKPKEE 272
++P+G + + ++ K+ E P E+
Sbjct: 771 SLPEGLKDWNKEREKEKEEPPGEK 794
Score = 38 (18.4 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 317 NVPKGFEKFYPDKNKKSAEKPKEE 340
++P+G + + ++ K+ E P E+
Sbjct: 771 SLPEGLKDWNKEREKEKEEPPGEK 794
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 2012 (713.3 bits), Expect = 2.2e-255, Sum P(2) = 2.2e-255
Identities = 390/491 (79%), Positives = 435/491 (88%)
Query: 528 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 587
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LTGP
Sbjct: 290 VGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGP 348
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+APCILFIDEI
Sbjct: 349 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEI 408
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DAVGRKRG NFGG SEQENTLNQLLVEMDGF D+LD ALLRPGRF
Sbjct: 409 DAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRF 468
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNEAA 765
DRQIF+ PDIKGRASIFKVHL+PLK D L++D L+RKLA+LTPGF+GAD+ANVCNEAA
Sbjct: 469 DRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAA 528
Query: 766 LIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYAD 825
LIAAR L I KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGW+L +AD
Sbjct: 529 LIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 588
Query: 826 PLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
PLLKVSIIPRGKGLGYAQYLP+EQYLY+KEQLLDRMCMTLGGRVSEEIFFGRITTGA+DD
Sbjct: 589 PLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDD 648
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L+KVTQSAYAQ+ FGMNEKVG +SFD+P+ G+MVLEKPYSE+TA++ID+EVR LIS AY
Sbjct: 649 LRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISEAY 708
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEED 1005
RT ALL E KA VEKVA LL+KE+LD+NDM+ELLG RPF EKSTYEEFVEGTGS +ED
Sbjct: 709 KRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFTEKSTYEEFVEGTGSLDED 768
Query: 1006 TSLPEGLKDWN 1016
TSLPEGL+DWN
Sbjct: 769 TSLPEGLQDWN 779
Score = 1044 (372.6 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 225/383 (58%), Positives = 270/383 (70%)
Query: 398 YFMYGLIGSVAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGN 457
YF++ + V+ +++ + +EITWKDF+NN L+KG+V++LEVVNK++VRV PG
Sbjct: 145 YFLWTALFWSGVMIY-FLFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGK 203
Query: 458 S-MDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE----LSSLSXXXX 512
+ +DG ++WFNIGSVD+FERNLE Q ++ I+ N +PV+Y E + LS L
Sbjct: 204 TPVDG-QYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLI 262
Query: 513 XXXXXXXXXXXXXX------------XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIME 560
V E+TAK++ +I V+FKDVAGCEEAK+EIME
Sbjct: 263 IAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIME 321
Query: 561 FVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFV 620
FVNFLKNP+QY DLGAKIPKGA+LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFV
Sbjct: 322 FVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFV 381
Query: 621 GVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFX 680
GVGP+RVRD+F++ARK+APCILFIDEIDAVGRKRG NFGG SEQENTLNQLLVEMDGF
Sbjct: 382 GVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFN 441
Query: 681 XXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDD 740
D+LD ALLRPGRFDRQIF+ PDIKGRASIFKVHL+PLK D +
Sbjct: 442 TTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALE- 500
Query: 741 LSRKLAALTPGFT-GADIANVCN 762
KLA T G A+V N
Sbjct: 501 -KDKLARKLASLTPGFSGADVAN 522
Score = 470 (170.5 bits), Expect = 2.2e-255, Sum P(2) = 2.2e-255
Identities = 99/188 (52%), Positives = 133/188 (70%)
Query: 1 MYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFNIGSVD 59
+++ + +EITWKDF+NN L+KG+V++LEVVNK++VRV PG + +DG ++WFNIGSVD
Sbjct: 161 LFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDG-QYVWFNIGSVD 219
Query: 60 SFERNLELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXX 119
+FERNLE Q ++ I+ N +PV+Y E + S L +LPT+LII +
Sbjct: 220 TFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGR 279
Query: 120 XXXX-----XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAK
Sbjct: 280 TGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 338
Query: 175 IPKGAMLT 182
IPKGA+LT
Sbjct: 339 IPKGAILT 346
Score = 75 (31.5 bits), Expect = 1.3e-213, Sum P(2) = 1.3e-213
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 223 ATLPKSNFPPTTVESVLHQWRIILSENVPKGFEKFYPD-KNKKSAEKPKEE-GKPSDS 278
AT+ +N + + V+ ++ S PKGFEK++P+ KN K A + KE G+ +S
Sbjct: 43 ATVQTANSRSSLLRDVIAAYQRFCSRP-PKGFEKYFPNGKNGKKASESKEAVGEKKES 99
Score = 69 (29.3 bits), Expect = 5.7e-213, Sum P(2) = 5.7e-213
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 319 PKGFEKFYPD-KNKKSAEKPKEE-GKPSDS 346
PKGFEK++P+ KN K A + KE G+ +S
Sbjct: 70 PKGFEKYFPNGKNGKKASESKEAVGEKKES 99
Score = 42 (19.8 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 249 NVPKGFEKFYPDKNKKSAEKPKEEGKP 275
++P+G + + ++ K+ EK KE+ +P
Sbjct: 770 SLPEGLQDWNKEREKEKKEK-KEKEEP 795
Score = 42 (19.8 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 317 NVPKGFEKFYPDKNKKSAEKPKEEGKP 343
++P+G + + ++ K+ EK KE+ +P
Sbjct: 770 SLPEGLQDWNKEREKEKKEK-KEKEEP 795
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 2012 (713.3 bits), Expect = 2.2e-255, Sum P(2) = 2.2e-255
Identities = 389/491 (79%), Positives = 437/491 (89%)
Query: 528 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 587
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LTGP
Sbjct: 292 VGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGP 350
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+APCILFIDEI
Sbjct: 351 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEI 410
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DAVGRKRG NFGG SEQENTLNQLLVEMDGF D+LD AL+RPGRF
Sbjct: 411 DAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRF 470
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNEAA 765
DRQIF+ PDIKGRASIFKVHL+PLK D L+++ L+RKLA+LTPGF+GAD+ANVCNEAA
Sbjct: 471 DRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAA 530
Query: 766 LIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYAD 825
LIAAR L +I KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGW+L +AD
Sbjct: 531 LIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 590
Query: 826 PLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
PLLKVSIIPRGKGLGYAQYLP+EQYLY+KEQLLDRMCMTLGGRVSEEIFFGRITTGA+DD
Sbjct: 591 PLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDD 650
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L+KVTQSAYAQ+ FGMNEKVG +SFD+P+ G+MVLEKPYSE+TA+LID+EVR LI++AY
Sbjct: 651 LRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAY 710
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEED 1005
RT ALL E KA VEKVA LL+KE+LD+NDM+ELLG RPF EKSTYEEFVEGTGS +ED
Sbjct: 711 KRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFVEKSTYEEFVEGTGSLDED 770
Query: 1006 TSLPEGLKDWN 1016
TSLPEGLKDWN
Sbjct: 771 TSLPEGLKDWN 781
Score = 1043 (372.2 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 221/366 (60%), Positives = 263/366 (71%)
Query: 415 MYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFNIGSVD 473
+++ + +EITWKDF+NN L+KG+V++LEVVNK++VRV PG + +DG ++WFNIGSVD
Sbjct: 163 LFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDG-QYVWFNIGSVD 221
Query: 474 SFERNLELAQAQMHIDPANYLPVIYKTEIE----LSSLSXXXXXXXXXXXXXXXXXX--- 526
+FERNLE Q ++ I+ N +PV+Y E + LS L
Sbjct: 222 TFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGR 281
Query: 527 ---------XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 577
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAK
Sbjct: 282 TGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 340
Query: 578 IPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKH 637
IPKGA+LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+
Sbjct: 341 IPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKN 400
Query: 638 APCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVL 697
APCILFIDEIDAVGRKRG NFGG SEQENTLNQLLVEMDGF D+L
Sbjct: 401 APCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDIL 460
Query: 698 DKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFT-GAD 756
D AL+RPGRFDRQIF+ PDIKGRASIFKVHL+PLK D + KLA T G
Sbjct: 461 DPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALE--KEKLARKLASLTPGFS 518
Query: 757 IANVCN 762
A+V N
Sbjct: 519 GADVAN 524
Score = 470 (170.5 bits), Expect = 2.2e-255, Sum P(2) = 2.2e-255
Identities = 99/188 (52%), Positives = 133/188 (70%)
Query: 1 MYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFNIGSVD 59
+++ + +EITWKDF+NN L+KG+V++LEVVNK++VRV PG + +DG ++WFNIGSVD
Sbjct: 163 LFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDG-QYVWFNIGSVD 221
Query: 60 SFERNLELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXX 119
+FERNLE Q ++ I+ N +PV+Y E + S L +LPT+LII +
Sbjct: 222 TFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGR 281
Query: 120 XXXX-----XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAK
Sbjct: 282 TGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 340
Query: 175 IPKGAMLT 182
IPKGA+LT
Sbjct: 341 IPKGAILT 348
Score = 76 (31.8 bits), Expect = 1.0e-213, Sum P(2) = 1.0e-213
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 251 PKGFEKFYPD-KNKKSAEKPKE-EGKPSDS 278
PKGFEK++P KN K A +PKE G+ +S
Sbjct: 71 PKGFEKYFPSGKNGKKASQPKEVTGEKKES 100
Score = 76 (31.8 bits), Expect = 1.0e-213, Sum P(2) = 1.0e-213
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 319 PKGFEKFYPD-KNKKSAEKPKE-EGKPSDS 346
PKGFEK++P KN K A +PKE G+ +S
Sbjct: 71 PKGFEKYFPSGKNGKKASQPKEVTGEKKES 100
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 2013 (713.7 bits), Expect = 4.5e-255, Sum P(2) = 4.5e-255
Identities = 389/491 (79%), Positives = 437/491 (89%)
Query: 528 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 587
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LTGP
Sbjct: 292 VGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGP 350
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+APCILFIDEI
Sbjct: 351 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEI 410
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DAVGRKRG NFGG SEQENTLNQLLVEMDGF D+LD AL+RPGRF
Sbjct: 411 DAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRF 470
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNEAA 765
DRQIF+ PDIKGRASIFKVHL+PLK D L+++ L+RKLA+LTPGF+GAD+ANVCNEAA
Sbjct: 471 DRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAA 530
Query: 766 LIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYAD 825
LIAAR L +I KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGW+L +AD
Sbjct: 531 LIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 590
Query: 826 PLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
PLLKVSIIPRGKGLGYAQYLPREQYLY++EQLLDRMCMTLGGRVSEEIFFGRITTGA+DD
Sbjct: 591 PLLKVSIIPRGKGLGYAQYLPREQYLYTREQLLDRMCMTLGGRVSEEIFFGRITTGAQDD 650
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L+KVTQSAYAQ+ FGMNEKVG +SFD+P+ G+MVLEKPYSE+TA+LID+EVR LI++AY
Sbjct: 651 LRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAY 710
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEED 1005
RT ALL E KA VEKVA LL+KE+LD+NDM+ELLG RPF EKSTYEEFVEGTGS +ED
Sbjct: 711 KRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDED 770
Query: 1006 TSLPEGLKDWN 1016
TSLPEGLKDWN
Sbjct: 771 TSLPEGLKDWN 781
Score = 1040 (371.2 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
Identities = 221/366 (60%), Positives = 262/366 (71%)
Query: 415 MYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFNIGSVD 473
+++ + +EITWKDF NN L+KG+V++LEVVNK++VRV PG + +DG ++WFNIGSVD
Sbjct: 163 LFKSSGREITWKDFANNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDG-QYVWFNIGSVD 221
Query: 474 SFERNLELAQAQMHIDPANYLPVIYKTEIE----LSSLSXXXXXXXXXXXXXXXXXX--- 526
+FERNLE Q ++ I+ N +PV+Y E + LS L
Sbjct: 222 TFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGR 281
Query: 527 ---------XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 577
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAK
Sbjct: 282 TGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 340
Query: 578 IPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKH 637
IPKGA+LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+
Sbjct: 341 IPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKN 400
Query: 638 APCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVL 697
APCILFIDEIDAVGRKRG NFGG SEQENTLNQLLVEMDGF D+L
Sbjct: 401 APCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDIL 460
Query: 698 DKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFT-GAD 756
D AL+RPGRFDRQIF+ PDIKGRASIFKVHL+PLK D + KLA T G
Sbjct: 461 DPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLE--KEKLARKLASLTPGFS 518
Query: 757 IANVCN 762
A+V N
Sbjct: 519 GADVAN 524
Score = 466 (169.1 bits), Expect = 4.5e-255, Sum P(2) = 4.5e-255
Identities = 99/188 (52%), Positives = 132/188 (70%)
Query: 1 MYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFNIGSVD 59
+++ + +EITWKDF NN L+KG+V++LEVVNK++VRV PG + +DG ++WFNIGSVD
Sbjct: 163 LFKSSGREITWKDFANNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDG-QYVWFNIGSVD 221
Query: 60 SFERNLELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXX 119
+FERNLE Q ++ I+ N +PV+Y E + S L +LPT+LII +
Sbjct: 222 TFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGR 281
Query: 120 XXXX-----XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAK
Sbjct: 282 TGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 340
Query: 175 IPKGAMLT 182
IPKGA+LT
Sbjct: 341 IPKGAILT 348
Score = 72 (30.4 bits), Expect = 2.1e-213, Sum P(2) = 2.1e-213
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 246 LSENVPKGFEKFYPD-KNKKSAEKPKE 271
L PKGFEK++P+ KN K +PKE
Sbjct: 66 LCSRPPKGFEKYFPNGKNGKKTSEPKE 92
Score = 72 (30.4 bits), Expect = 2.1e-213, Sum P(2) = 2.1e-213
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 314 LSENVPKGFEKFYPD-KNKKSAEKPKE 339
L PKGFEK++P+ KN K +PKE
Sbjct: 66 LCSRPPKGFEKYFPNGKNGKKTSEPKE 92
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 2010 (712.6 bits), Expect = 4.5e-255, Sum P(2) = 4.5e-255
Identities = 389/491 (79%), Positives = 436/491 (88%)
Query: 528 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGP 587
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LTGP
Sbjct: 290 VGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGP 348
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRD+F++ARK+APCILFIDEI
Sbjct: 349 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEI 408
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DAVGRKRG NFGG SEQENTLNQLLVEMDGF D+LD ALLRPGRF
Sbjct: 409 DAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRF 468
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNEAA 765
DRQIF+ PDIKGRASIFKVHL+PLK D L++D L+RKLA+LTPGF+GAD+ANVCNEAA
Sbjct: 469 DRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAA 528
Query: 766 LIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYAD 825
LIAAR L I KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGW+L +AD
Sbjct: 529 LIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHAD 588
Query: 826 PLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
PLLKVSIIPRGKGLGYAQYLP+EQYLY+KEQLLDRMCMTLGGRVSEEIFFGRITTGA+DD
Sbjct: 589 PLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDD 648
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L+KVTQSAYAQ+ FGMNEKVG +SFD+P+ G+MVLEKPYSE+TA++ID+EVR LIS+AY
Sbjct: 649 LRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAY 708
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEED 1005
RT ALL E KA VEKVA LL+KE+LD+NDM++LLG RPF EKSTYEEFVEGTGS +ED
Sbjct: 709 RRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQLLGPRPFTEKSTYEEFVEGTGSLDED 768
Query: 1006 TSLPEGLKDWN 1016
TSLPEGL+DWN
Sbjct: 769 TSLPEGLQDWN 779
Score = 1044 (372.6 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 226/383 (59%), Positives = 270/383 (70%)
Query: 398 YFMYGLIGSVAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGN 457
YF++ + V+ V ++ + +EITWKDF+NN L+KG+V++LEVVNK++VRV PG
Sbjct: 145 YFLWTALFWGGVMIYFV-FKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGK 203
Query: 458 S-MDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE----LSSLSXXXX 512
+ +DG ++WFNIGSVD+FERNLE Q ++ I+ N +PV+Y E + LS L
Sbjct: 204 TPVDG-QYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLI 262
Query: 513 XXXXXXXXXXXXXX------------XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIME 560
V E+TAK++ +I V+FKDVAGCEEAK+EIME
Sbjct: 263 IAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIME 321
Query: 561 FVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFV 620
FVNFLKNP+QY DLGAKIPKGA+LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFV
Sbjct: 322 FVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFV 381
Query: 621 GVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFX 680
GVGP+RVRD+F++ARK+APCILFIDEIDAVGRKRG NFGG SEQENTLNQLLVEMDGF
Sbjct: 382 GVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFN 441
Query: 681 XXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDD 740
D+LD ALLRPGRFDRQIF+ PDIKGRASIFKVHL+PLK D +
Sbjct: 442 TTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALE- 500
Query: 741 LSRKLAALTPGFT-GADIANVCN 762
KLA T G A+V N
Sbjct: 501 -KDKLARKLASLTPGFSGADVAN 522
Score = 469 (170.2 bits), Expect = 4.5e-255, Sum P(2) = 4.5e-255
Identities = 99/188 (52%), Positives = 133/188 (70%)
Query: 1 MYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS-MDGANFLWFNIGSVD 59
+++ + +EITWKDF+NN L+KG+V++LEVVNK++VRV PG + +DG ++WFNIGSVD
Sbjct: 161 VFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDG-QYVWFNIGSVD 219
Query: 60 SFERNLELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXX 119
+FERNLE Q ++ I+ N +PV+Y E + S L +LPT+LII +
Sbjct: 220 TFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGR 279
Query: 120 XXXX-----XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAK
Sbjct: 280 TGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 338
Query: 175 IPKGAMLT 182
IPKGA+LT
Sbjct: 339 IPKGAILT 346
Score = 75 (31.5 bits), Expect = 2.1e-213, Sum P(2) = 2.1e-213
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 251 PKGFEKFYPD-KNKKSAEKPKE 271
PKGFEK++P+ KN K A +PKE
Sbjct: 70 PKGFEKYFPNGKNGKKASEPKE 91
Score = 75 (31.5 bits), Expect = 2.1e-213, Sum P(2) = 2.1e-213
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 319 PKGFEKFYPD-KNKKSAEKPKE 339
PKGFEK++P+ KN K A +PKE
Sbjct: 70 PKGFEKYFPNGKNGKKASEPKE 91
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 1950 (691.5 bits), Expect = 1.4e-240, Sum P(2) = 1.4e-240
Identities = 377/489 (77%), Positives = 425/489 (86%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+STA++IN DI V+F DVAGCEEAK+EIMEFVNFLKNPQQY DLGAKIPKGA+LTGPPG
Sbjct: 277 QSTARVINREDIKVKFADVAGCEEAKIEIMEFVNFLKNPQQYKDLGAKIPKGAILTGPPG 336
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+RVRDMFSMARK++PCILFIDEIDA
Sbjct: 337 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDA 396
Query: 650 VGRKRGGRN-FGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXX-DVLDKALLRPGRF 707
VGRKRGG+ GGHSEQENTLNQLLVEMDGF D+LD ALLRPGRF
Sbjct: 397 VGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRF 456
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
DRQI+VP PDIKGRASIF+VHL PL+T LD+ LSRKLAA TPGF+GADI+NVCNEAALI
Sbjct: 457 DRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAALI 516
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AARD + I KHFEQAIERVVAGMEKKT VLQ EEKKTVAYHEAGHA+AGWFL++ADPL
Sbjct: 517 AARDANHEISNKHFEQAIERVVAGMEKKTQVLQKEEKKTVAYHEAGHAIAGWFLQHADPL 576
Query: 828 LKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLK 887
LKVSIIPRGKGLGYAQYLP+EQYLYSK+QLLDRMCMTLGGRV+EEIFFGRITTGA+DDL+
Sbjct: 577 LKVSIIPRGKGLGYAQYLPKEQYLYSKDQLLDRMCMTLGGRVAEEIFFGRITTGAQDDLQ 636
Query: 888 KVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTR 947
KVTQ AY+QV FGM+EKVG +SF+ P PGEM +KPYSE+TAQLID EVR L+ NA R
Sbjct: 637 KVTQMAYSQVVKFGMSEKVGPLSFETPAPGEMAFDKPYSEATAQLIDQEVRDLVMNALRR 696
Query: 948 TKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEEDTS 1007
T+ LL+E ++ +E+VA RLL+KEIL+R DMIEL+G RPF EK+TYEE V GTG +E+
Sbjct: 697 TRDLLLEKRSDIERVALRLLEKEILNREDMIELVGKRPFVEKNTYEEMVSGTGGLDENVE 756
Query: 1008 LPEGLKDWN 1016
LP+GL++WN
Sbjct: 757 LPKGLENWN 765
Score = 392 (143.0 bits), Expect = 1.4e-240, Sum P(2) = 1.4e-240
Identities = 91/191 (47%), Positives = 118/191 (61%)
Query: 5 NYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERN 64
+Y+EI+WK+F ++ L G+VE+LEVV+K+WVR+ G +FNIGSVDSFER+
Sbjct: 144 SYREISWKEFYSDFLEAGLVERLEVVDKRWVRIVSSSGKY--AGQTCYFNIGSVDSFERS 201
Query: 65 LELAQAQMHIDPANYLPVIYKTEI----ELSSLSGI-LPTL--------LIIGRSAEMMX 111
L AQ + D +PV+YK+E E+ +L + P L L G +A
Sbjct: 202 LGAAQHHLQYDADRQIPVLYKSEFNFKREIPNLISVAFPLLFGYYIYRMLKGGGAAGGAG 261
Query: 112 XXXXXXXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDL 171
+STA++IN DI V+F DVAGCEEAK+EIMEFVNFLKNPQQY DL
Sbjct: 262 RAGGGGLGGMFGGFGQSTARVINREDIKVKFADVAGCEEAKIEIMEFVNFLKNPQQYKDL 321
Query: 172 GAKIPKGAMLT 182
GAKIPKGA+LT
Sbjct: 322 GAKIPKGAILT 332
Score = 209 (78.6 bits), Expect = 3.2e-221, Sum P(2) = 3.2e-221
Identities = 45/98 (45%), Positives = 63/98 (64%)
Query: 406 SVAVLAA--AVMYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGAN 463
SV +L A A M +Y+EI+WK+F ++ L G+VE+LEVV+K+WVR+ G
Sbjct: 129 SVGILLALYAFMDYQSYREISWKEFYSDFLEAGLVERLEVVDKRWVRIVSSSGKY--AGQ 186
Query: 464 FLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTE 501
+FNIGSVDSFER+L AQ + D +PV+YK+E
Sbjct: 187 TCYFNIGSVDSFERSLGAAQHHLQYDADRQIPVLYKSE 224
Score = 52 (23.4 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 246 LSENV--PKGFEKFYPDKNKKSAEKPKEEGK 274
L ENV PKG E + NK+S +K K+E K
Sbjct: 751 LDENVELPKGLENW----NKESEKKKKDEEK 777
Score = 52 (23.4 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 314 LSENV--PKGFEKFYPDKNKKSAEKPKEEGK 342
L ENV PKG E + NK+S +K K+E K
Sbjct: 751 LDENVELPKGLENW----NKESEKKKKDEEK 777
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 1869 (663.0 bits), Expect = 1.1e-238, Sum P(2) = 1.1e-238
Identities = 360/490 (73%), Positives = 416/490 (84%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
E+ AK+I DIGVRF DVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LTGPPG
Sbjct: 288 ETIAKIIKD-DIGVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLTGPPG 346
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKATAGEA VPFITV+GSEFLEMFVGVGP+RVRDMF++ARK+APCILF+DEIDA
Sbjct: 347 TGKTLLAKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDA 406
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
+GRKRG +FGG SEQENTLNQLLVEMDGF DVLD AL+RPGRFDR
Sbjct: 407 IGRKRGRGHFGGQSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDR 466
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTG--ADIANVCNEAA 765
QI++ PDIKGR+SIF+VHL+PLK D L +D L+RKLAALTPGFTG ADI+NVCNEAA
Sbjct: 467 QIYIGPPDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAA 526
Query: 766 LIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYAD 825
LIAAR L+ ++ KHFEQAIERV+ G+EKKT VLQP EK TVAYHEAGHAV GWFL +AD
Sbjct: 527 LIAARHLNPSVGEKHFEQAIERVIGGLEKKTQVLQPGEKMTVAYHEAGHAVVGWFLEHAD 586
Query: 826 PLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
PLLKVSI+PRGKGLGYAQ LPREQYLY++EQL DRMC LGGRV+E++FFGR+TTGA+DD
Sbjct: 587 PLLKVSIVPRGKGLGYAQCLPREQYLYTREQLFDRMCAMLGGRVAEQLFFGRVTTGAQDD 646
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L+KVTQSAYAQ+ FGM+EK+G VSFD+P+PGE ++EKP+SE+TAQLID EVR LI +A+
Sbjct: 647 LRKVTQSAYAQIVQFGMSEKLGQVSFDLPRPGEALVEKPFSEATAQLIDEEVRRLIGSAH 706
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEED 1005
RT LL + V+KV RLL+KE+L+R DM+ELLG RPF EK TYEE VEGTG EED
Sbjct: 707 ARTLDLLTRCREQVDKVGRRLLEKEVLERADMVELLGPRPFAEKVTYEELVEGTGGLEED 766
Query: 1006 TSLPEGLKDW 1015
T+LPEGL+ W
Sbjct: 767 TALPEGLQGW 776
Score = 1069 (381.4 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 229/381 (60%), Positives = 274/381 (71%)
Query: 406 SVAVLAAAVMYEMNY-------KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS 458
S+AVL A V+ Y KEITWK F+ L +G+V++LEVVNK++VRV PG S
Sbjct: 144 SLAVLGAGVVAGFLYFYFRDPGKEITWKHFVQYYLARGLVDRLEVVNKQFVRVIPAPGTS 203
Query: 459 MDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE---LSSL-------- 507
++ + WF+IGSVD+FERNLE AQ ++ I+P N V+Y TE + L SL
Sbjct: 204 LE--KYAWFSIGSVDTFERNLETAQWELGIEPPNQTAVVYTTESDGTFLRSLVPTLLLIG 261
Query: 508 ----SXXXXXXXXXXXXXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVN 563
+ + E+ AK+I DIGVRF DVAGCEEAK+EIMEFVN
Sbjct: 262 IFLYAMRRGPMGAGRGGRGGRLFGIGETIAKIIKD-DIGVRFADVAGCEEAKLEIMEFVN 320
Query: 564 FLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVG 623
FLKNP+QY DLGAKIPKGA+LTGPPGTGKTLLAKATAGEA VPFITV+GSEFLEMFVGVG
Sbjct: 321 FLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEAGVPFITVNGSEFLEMFVGVG 380
Query: 624 PSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXX 683
P+RVRDMF++ARK+APCILF+DEIDA+GRKRG +FGG SEQENTLNQLLVEMDGF
Sbjct: 381 PARVRDMFALARKNAPCILFVDEIDAIGRKRGRGHFGGQSEQENTLNQLLVEMDGFNSTT 440
Query: 684 XXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDL 741
DVLD AL+RPGRFDRQI++ PDIKGR+SIF+VHL+PLK D L +D L
Sbjct: 441 NVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRSSIFRVHLRPLKLDESLSKDAL 500
Query: 742 SRKLAALTPGFTGADIANVCN 762
+RKLAALTPGFTG+ A++ N
Sbjct: 501 ARKLAALTPGFTGSG-ADISN 520
Score = 455 (165.2 bits), Expect = 1.1e-238, Sum P(2) = 1.1e-238
Identities = 97/180 (53%), Positives = 124/180 (68%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 66
KEITWK F+ L +G+V++LEVVNK++VRV PG S++ + WF+IGSVD+FERNLE
Sbjct: 166 KEITWKHFVQYYLARGLVDRLEVVNKQFVRVIPAPGTSLE--KYAWFSIGSVDTFERNLE 223
Query: 67 LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXX----XXXXXXXXXX 122
AQ ++ I+P N V+Y TE + + L ++PTLL+IG M
Sbjct: 224 TAQWELGIEPPNQTAVVYTTESDGTFLRSLVPTLLLIGIFLYAMRRGPMGAGRGGRGGRL 283
Query: 123 XXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
+ E+ AK+I DIGVRF DVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+LT
Sbjct: 284 FGIGETIAKIIKD-DIGVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLT 342
Score = 51 (23.0 bits), Expect = 6.0e-196, Sum P(2) = 6.0e-196
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 237 SVLHQWRIILSENVPKGFEKFYPDKNKKSAE-------KPKEEGKPSDS 278
SV H W L PKGFEKF+ + +++ E PK +P D+
Sbjct: 65 SVSH-W---LCSKPPKGFEKFFK-RRRRNTEVLLGKHIPPKGTSEPKDA 108
Score = 48 (22.0 bits), Expect = 1.3e-195, Sum P(2) = 1.3e-195
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 314 LSENVPKGFEKFYPDKNKKSAE-------KPKEEGKPSDS 346
L PKGFEKF+ + +++ E PK +P D+
Sbjct: 70 LCSKPPKGFEKFFK-RRRRNTEVLLGKHIPPKGTSEPKDA 108
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 2213 (784.1 bits), Expect = 8.3e-234, Sum P(2) = 8.3e-234
Identities = 445/641 (69%), Positives = 514/641 (80%)
Query: 397 KYFMYGLIGSVAVLAAAVMY---EMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKL 453
++ MY ++GS V Y + +EITWKDF+NN L+KG+V++LEVVNK++VRV
Sbjct: 143 EFRMY-VVGSSFFWTMVVYYFFFRVPGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVIF 201
Query: 454 LPGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE----LSSLSX 509
+ G S ++WFNIGSVD+FERNLE Q + I+ N LPV+Y TE + LS L
Sbjct: 202 VSGKSPHEW-YVWFNIGSVDTFERNLETVQQDLGIEVENRLPVVYSTESDGSFLLSLLPT 260
Query: 510 XXXXXXXXXXXXXXXXX------------XVMESTAKLINSSDIGVRFKDVAGCEEAKVE 557
V E+TAK++ +I V+FKDVAGCEEAK+E
Sbjct: 261 ILIIGSLLYTLRRGPAGLGRGGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLE 319
Query: 558 IMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 617
IMEFVNFLKNP+QY DLGAKIPKGA+LTGPPGTGKTLLAKATAGEANVPFITV+GSEFLE
Sbjct: 320 IMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLE 379
Query: 618 MFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMD 677
MFVGVGP+RVRD+F++ARK+APCILFIDEIDAVGRKRG NFGG SEQENTLNQLLVEMD
Sbjct: 380 MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMD 439
Query: 678 GFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTD-- 735
GF D+LD AL+RPGRFDRQI++ PDIKGRASIFKVHL+PLK D
Sbjct: 440 GFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTV 499
Query: 736 LDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKK 795
LD+D+L+RKLA+LTPGF+GADIANVCNEAALIAAR L I KHFEQAIERV+ G+EKK
Sbjct: 500 LDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIGGLEKK 559
Query: 796 TNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQYLPREQYLYSKE 855
T VLQPEEKKTVAYHEAGHAVAGWFL +ADPLLKVSIIPRGKGLGYAQYLP+EQYLY+KE
Sbjct: 560 TQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTKE 619
Query: 856 QLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQ 915
QLLDRMCMTLGGRVSE+IFFGRITTGA+DDLKKVTQSAYAQ+ FGMNEKVG +SFD+P+
Sbjct: 620 QLLDRMCMTLGGRVSEQIFFGRITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPR 679
Query: 916 PGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRN 975
G+MVLEKPYSE+TA++ID EVRSLI+ AY RT +LL E KA VEKVA RLL+KE+LD++
Sbjct: 680 QGDMVLEKPYSEATARMIDEEVRSLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKS 739
Query: 976 DMIELLGTRPFPEKSTYEEFVEGTGSFEEDTSLPEGLKDWN 1016
DM++LLG RPF EKSTYEEFVEGTGS +EDTSLPEGLKDWN
Sbjct: 740 DMVDLLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDWN 780
Score = 470 (170.5 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 100/181 (55%), Positives = 127/181 (70%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 66
+EITWKDF+NN L+KG+V++LEVVNK++VRV + G S ++WFNIGSVD+FERNLE
Sbjct: 169 REITWKDFVNNYLSKGVVDRLEVVNKRFVRVIFVSGKSPHEW-YVWFNIGSVDTFERNLE 227
Query: 67 LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXXXXXX--- 123
Q + I+ N LPV+Y TE + S L +LPT+LIIG +
Sbjct: 228 TVQQDLGIEVENRLPVVYSTESDGSFLLSLLPTILIIGSLLYTLRRGPAGLGRGGRGMGG 287
Query: 124 --XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+L
Sbjct: 288 LFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAIL 346
Query: 182 T 182
T
Sbjct: 347 T 347
Score = 65 (27.9 bits), Expect = 8.3e-234, Sum P(2) = 8.3e-234
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 233 TTVESVLHQWRIILSENVPKGFEKFYPDKNKKSAEKPKEEGKPSDSTQ 280
T + SV+ R + S+ PKGFEK++P+ K + K G+ ++ Q
Sbjct: 54 TVLASVIAACRRLFSQP-PKGFEKYFPNGKKPNGTKGSA-GETKEAKQ 99
Score = 56 (24.8 bits), Expect = 7.4e-233, Sum P(2) = 7.4e-233
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 319 PKGFEKFYPDKNKKSAEKPKEEGKPSDSTQ 348
PKGFEK++P+ K + K G+ ++ Q
Sbjct: 71 PKGFEKYFPNGKKPNGTKGSA-GETKEAKQ 99
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 2213 (784.1 bits), Expect = 2.3e-229, P = 2.3e-229
Identities = 439/614 (71%), Positives = 503/614 (81%)
Query: 421 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 480
+EITWKDF+NN L+KG+V++LEVVNK++VRV + G S ++WFNIGSVD+FERNLE
Sbjct: 14 REITWKDFVNNYLSKGVVDRLEVVNKRFVRVIFVSGKSPH--QYVWFNIGSVDTFERNLE 71
Query: 481 LAQAQMHIDPANYLPVIYKTEIE----LSSLSXXXXXXXXXXXXXXXXXX---------- 526
Q + I+ N LPV+Y TE + LS L
Sbjct: 72 TVQQDLGIEVENRLPVVYSTESDGSFLLSLLPTILIIGSLLYTLRRGPAGLGRGGRGMGG 131
Query: 527 --XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 584
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+L
Sbjct: 132 LFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAIL 190
Query: 585 TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFI 644
TGPPGTGKTLLAKATAGEANVPFITV+GSEFLEMFVGVGP+RVRD+F++ARK+APCILFI
Sbjct: 191 TGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFI 250
Query: 645 DEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRP 704
DEIDAVGRKRG NFGG SEQENTLNQLLVEMDGF D+LD AL+RP
Sbjct: 251 DEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRP 310
Query: 705 GRFDRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCN 762
GRFDRQI++ PDIKGRASIFKVHL+PLK D LD+D+L+RKLA+LTPGF+GADIANVCN
Sbjct: 311 GRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCN 370
Query: 763 EAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLR 822
EAALIAAR L I KHFEQAIERV+ G+EKKT VLQPEEKKTVAYHEAGHAVAGWFL
Sbjct: 371 EAALIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLE 430
Query: 823 YADPLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGA 882
+ADPLLKVSIIPRGKGLGYAQYLP+EQYLY+KEQLLDRMCMTLGGRVSE+IFFGRITTGA
Sbjct: 431 HADPLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEQIFFGRITTGA 490
Query: 883 EDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLIS 942
+DDLKKVTQSAYAQ+ FGMNEKVG +SFD+P+ G+MVLEKPYSE+TA++ID EVRSLI+
Sbjct: 491 QDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDEEVRSLIN 550
Query: 943 NAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSF 1002
AY RT +LL E KA VEKVA RLL+KE+LD++DM++LLG RPF EKSTYEEFVEGTGS
Sbjct: 551 IAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKSDMVDLLGPRPFAEKSTYEEFVEGTGSL 610
Query: 1003 EEDTSLPEGLKDWN 1016
+EDTSLPEGLKDWN
Sbjct: 611 DEDTSLPEGLKDWN 624
Score = 473 (171.6 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 100/181 (55%), Positives = 127/181 (70%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 66
+EITWKDF+NN L+KG+V++LEVVNK++VRV + G S ++WFNIGSVD+FERNLE
Sbjct: 14 REITWKDFVNNYLSKGVVDRLEVVNKRFVRVIFVSGKSPH--QYVWFNIGSVDTFERNLE 71
Query: 67 LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXXXXXX--- 123
Q + I+ N LPV+Y TE + S L +LPT+LIIG +
Sbjct: 72 TVQQDLGIEVENRLPVVYSTESDGSFLLSLLPTILIIGSLLYTLRRGPAGLGRGGRGMGG 131
Query: 124 --XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGA+L
Sbjct: 132 LFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAIL 190
Query: 182 T 182
T
Sbjct: 191 T 191
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 2118 (750.6 bits), Expect = 3.1e-223, Sum P(2) = 3.1e-223
Identities = 420/613 (68%), Positives = 488/613 (79%)
Query: 421 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 480
KEITWK F+ L +G+V++LEVVNK++VRV +PG + + F+WFNIGSVD+FERNLE
Sbjct: 135 KEITWKHFVQYYLARGLVDRLEVVNKQFVRVIPVPGTTSE--KFVWFNIGSVDTFERNLE 192
Query: 481 LAQAQMHIDPANYLPVIYKTEIE---LSSL------------SXXXXXXXXXXXXXXXXX 525
AQ ++ ++P N + V+Y TE + L SL +
Sbjct: 193 SAQWELGVEPTNQVSVVYTTESDGSLLRSLVPTLVLVGILLYAMKRGPMGTGRGGRGGGL 252
Query: 526 XXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 585
V E+TAK++ ++ I VRF DVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGAMLT
Sbjct: 253 FSVGETTAKILKNN-IDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLT 311
Query: 586 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFID 645
GPPGTGKTLLAKATAGEA VPFITV+GSEFLEMFVGVGP+RVRDMF+MARKHAPCILFID
Sbjct: 312 GPPGTGKTLLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFID 371
Query: 646 EIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPG 705
EIDA+GRKRG + GG SEQENTLNQ+LVEMDGF D+LD AL RPG
Sbjct: 372 EIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPG 431
Query: 706 RFDRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNE 763
RFDRQI++ PDIKGR+SIFKVHL+PLK D L RD LSRKLAALTPGFTGADI+NVCNE
Sbjct: 432 RFDRQIYIGPPDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNE 491
Query: 764 AALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRY 823
AALIAAR L ++ +HFEQAIERV+ G+EKKT VLQP EK TVAYHEAGHAV GWFL +
Sbjct: 492 AALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEH 551
Query: 824 ADPLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAE 883
ADPLLKVSIIPRGKGLGYAQYLPREQYLY++EQL DRMCM LGGRV+E++FFG+ITTGA+
Sbjct: 552 ADPLLKVSIIPRGKGLGYAQYLPREQYLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQ 611
Query: 884 DDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISN 943
DDL+KVTQSAYAQ+ FGM+EK+G VSFD P+ GE ++EKPYSE+TAQLID EVR L+ +
Sbjct: 612 DDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRS 671
Query: 944 AYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFE 1003
AY RT LL + + VEKV RLL+KE+L++ DMIELLG RPF EKSTYEEFVEGTGS E
Sbjct: 672 AYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELLGPRPFAEKSTYEEFVEGTGSLE 731
Query: 1004 EDTSLPEGLKDWN 1016
EDTSLPEGLKDWN
Sbjct: 732 EDTSLPEGLKDWN 744
Score = 459 (166.6 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 96/180 (53%), Positives = 127/180 (70%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 66
KEITWK F+ L +G+V++LEVVNK++VRV +PG + + F+WFNIGSVD+FERNLE
Sbjct: 135 KEITWKHFVQYYLARGLVDRLEVVNKQFVRVIPVPGTTSE--KFVWFNIGSVDTFERNLE 192
Query: 67 LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXX----XXXXXXXXXX 122
AQ ++ ++P N + V+Y TE + S L ++PTL+++G M
Sbjct: 193 SAQWELGVEPTNQVSVVYTTESDGSLLRSLVPTLVLVGILLYAMKRGPMGTGRGGRGGGL 252
Query: 123 XXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
V E+TAK++ ++ I VRF DVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGAMLT
Sbjct: 253 FSVGETTAKILKNN-IDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLT 311
Score = 60 (26.2 bits), Expect = 3.1e-223, Sum P(2) = 3.1e-223
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 251 PKGFEKFYPDK-NKKSA 266
PKGFEKF+ +K N+KSA
Sbjct: 46 PKGFEKFFKNKKNRKSA 62
Score = 60 (26.2 bits), Expect = 3.1e-223, Sum P(2) = 3.1e-223
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 319 PKGFEKFYPDK-NKKSA 334
PKGFEKF+ +K N+KSA
Sbjct: 46 PKGFEKFFKNKKNRKSA 62
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 2117 (750.3 bits), Expect = 4.0e-223, Sum P(2) = 4.0e-223
Identities = 419/613 (68%), Positives = 486/613 (79%)
Query: 421 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 480
KEITWK F+ L +G+V++LEVVNK++VRV +PG + + F+WFNIGSVD+FERNLE
Sbjct: 163 KEITWKHFVQYYLARGLVDRLEVVNKQFVRVIPVPGTTSE--RFVWFNIGSVDTFERNLE 220
Query: 481 LAQAQMHIDPANYLPVIYKTEIELSSLSXXXXXXXXXXXXXXXXXXXVM----------- 529
AQ ++ I+P N V+Y TE + S L M
Sbjct: 221 SAQWELGIEPTNQAAVVYTTESDGSFLRSLVPTLVLVSILLYAMRRGPMGTGRGGRGGGL 280
Query: 530 ----ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 585
E+TAK++ ++ I VRF DVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGAMLT
Sbjct: 281 FSVGETTAKILKNN-IDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLT 339
Query: 586 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFID 645
GPPGTGKTLLAKATAGEANVPFITV+GSEFLEMFVGVGP+RVRDMF+MARKHAPCILFID
Sbjct: 340 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFID 399
Query: 646 EIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPG 705
EIDA+GRKRG + GG SEQENTLNQ+LVEMDGF D+LD AL RPG
Sbjct: 400 EIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPG 459
Query: 706 RFDRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNE 763
RFDRQI++ PDIKGR+SIFKVHL+PLK D L +D LSRKLAALTPGFTGADI+NVCNE
Sbjct: 460 RFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNE 519
Query: 764 AALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRY 823
AALIAAR L ++ +HFEQAIERV+ G+EKKT VLQP EK TVAYHEAGHAV GWFL +
Sbjct: 520 AALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEH 579
Query: 824 ADPLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAE 883
ADPLLKVSIIPRGKGLGYAQYLPREQ+LY++EQL DRMCM LGGRV+E++FFG+ITTGA+
Sbjct: 580 ADPLLKVSIIPRGKGLGYAQYLPREQFLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQ 639
Query: 884 DDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISN 943
DDL+KVTQSAYAQ+ FGM+EK+G VSFD P+ GE ++EKPYSE+TAQLID EVR L+ +
Sbjct: 640 DDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRS 699
Query: 944 AYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFE 1003
AY RT LL + + VEKV RLL+KE+L++ DMIELLG RPF EKSTYEEFVEGTGS E
Sbjct: 700 AYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELLGPRPFAEKSTYEEFVEGTGSLE 759
Query: 1004 EDTSLPEGLKDWN 1016
EDTSLPEGLKDWN
Sbjct: 760 EDTSLPEGLKDWN 772
Score = 452 (164.2 bits), Expect = 1.5e-39, P = 1.5e-39
Identities = 96/180 (53%), Positives = 125/180 (69%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLE 66
KEITWK F+ L +G+V++LEVVNK++VRV +PG + + F+WFNIGSVD+FERNLE
Sbjct: 163 KEITWKHFVQYYLARGLVDRLEVVNKQFVRVIPVPGTTSE--RFVWFNIGSVDTFERNLE 220
Query: 67 LAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXX----XXXXXXXXXX 122
AQ ++ I+P N V+Y TE + S L ++PTL+++ M
Sbjct: 221 SAQWELGIEPTNQAAVVYTTESDGSFLRSLVPTLVLVSILLYAMRRGPMGTGRGGRGGGL 280
Query: 123 XXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
V E+TAK++ ++ I VRF DVAGCEEAK+EIMEFVNFLKNP+QY DLGAKIPKGAMLT
Sbjct: 281 FSVGETTAKILKNN-IDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLT 339
Score = 60 (26.2 bits), Expect = 4.0e-223, Sum P(2) = 4.0e-223
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 251 PKGFEKFYPDK-NKKSAEK-----PKEEGK 274
P+GFEKF+ +K N+KSA PK+E K
Sbjct: 74 PRGFEKFFKNKKNRKSASPGNSVPPKKEPK 103
Score = 60 (26.2 bits), Expect = 4.0e-223, Sum P(2) = 4.0e-223
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 319 PKGFEKFYPDK-NKKSAEK-----PKEEGK 342
P+GFEKF+ +K N+KSA PK+E K
Sbjct: 74 PRGFEKFFKNKKNRKSASPGNSVPPKKEPK 103
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 1993 (706.6 bits), Expect = 4.7e-206, P = 4.7e-206
Identities = 403/573 (70%), Positives = 461/573 (80%)
Query: 464 FLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE----LSSLSXXXXXXXXXXX 519
++WFNIGSVD+FERNLE Q ++ I+ N +PV+Y E + LS L
Sbjct: 2 YVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTALIIAFLLYT 61
Query: 520 XXXXXXX------------XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKN 567
V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKN
Sbjct: 62 IRRGPAGIGRSGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKN 120
Query: 568 PQQYIDLGAKIPK-GAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSR 626
P+QY DLGAKIPK GA+LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP+R
Sbjct: 121 PKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPAR 180
Query: 627 VRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXX 686
VRD+F++ARK+APCILFIDEIDAVGRKRG NFGG SEQENTLNQLLVEMDGF
Sbjct: 181 VRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVV 240
Query: 687 XXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRK 744
D+LD ALLRPGRFDRQIF+ PDIKGRASIFKVHL+PLK D L+++ L+RK
Sbjct: 241 ILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARK 300
Query: 745 LAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEK 804
LA+LTPGF+GAD+ANVCNEAALIAAR L +I KHFEQAIERV+ G+EKKT VLQPEEK
Sbjct: 301 LASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEK 360
Query: 805 KTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMT 864
KTVAYHEAGHAVAGW+L +ADPLLKVSIIPRGKGLGYAQYLP+EQYLY+KEQLLDRMCMT
Sbjct: 361 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMT 420
Query: 865 LGGRVS-EEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEK 923
G + FGRITTGA+DD +KVTQSAYAQ+ FGMNEKVG +SFD+P+ G+MVLEK
Sbjct: 421 PGWPCGPRKSSFGRITTGAQDD-RKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEK 479
Query: 924 PYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGT 983
PYSE+TA+LID+EVR LI++AY RT ALL E KA VEKVA LL+KE+LD+N+M+ELLG
Sbjct: 480 PYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNNMVELLGP 539
Query: 984 RPFPEKSTYEEFVEGTGSFEEDTSLPEGLKDWN 1016
RPF EKSTYEEFVEGTGS +EDTSLPEGLKDWN
Sbjct: 540 RPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDWN 572
Score = 320 (117.7 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 73/139 (52%), Positives = 92/139 (66%)
Query: 50 FLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEM 109
++WFNIGSVD+FERNLE Q ++ I+ N +PV+Y E + S L +LPT LII
Sbjct: 2 YVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTALIIAFLLYT 61
Query: 110 MXXXXXXXXXXXXX-----XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKN 164
+ V E+TAK++ +I V+FKDVAGCEEAK+EIMEFVNFLKN
Sbjct: 62 IRRGPAGIGRSGRGMGGLFSVGETTAKVLKD-EIDVKFKDVAGCEEAKLEIMEFVNFLKN 120
Query: 165 PQQYIDLGAKIPK-GAMLT 182
P+QY DLGAKIPK GA+LT
Sbjct: 121 PKQYQDLGAKIPKKGAILT 139
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 1434 (509.9 bits), Expect = 9.1e-176, Sum P(3) = 9.1e-176
Identities = 277/468 (59%), Positives = 352/468 (75%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
+ FKDVAGC+EAK EIMEFV+FLKNP++Y DLGAKIPKGA+L GPPGTGKTLLAKATAGE
Sbjct: 319 IYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 378
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
+ VPF+++SGS+F+EMFVGVGPSRVR +F AR+ AP I+FIDEIDA+GR RG GG+
Sbjct: 379 SGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGN 438
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E+E+TLNQLLVEMDGF D+LDKALLRPGRFDRQI + PDIKGR
Sbjct: 439 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 498
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
IFK++LK +K D + S++LAALTPGF GADIANVCNEAALIAAR T+ M HFE
Sbjct: 499 QIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFE 558
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKG-LGY 841
AI+RV+ G+EKK V+ E++TVAYHE+GHAV GWFL +A+PLLKV+I+PRG LG+
Sbjct: 559 SAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGF 618
Query: 842 AQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFG 901
AQY+P E L +KEQL D CMTLGGR +E++ G+I+TGA++DL+KVT+ YAQVA +G
Sbjct: 619 AQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQVAVYG 678
Query: 902 MNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEK 961
++KVG +SF P+ KPYS T +ID EVR ++ AY RT L+ EHK V +
Sbjct: 679 FSDKVGLLSFP-PRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERTVELVEEHKVKVAE 737
Query: 962 VAERLLKKEILDRNDMIELLGTRPFP--EKSTYEEFVEGTGSFEEDTS 1007
+AE LL+KE+L ++D++++LG RPF E + Y+ F G E+D++
Sbjct: 738 IAELLLEKEVLHQDDLLKILGERPFKSAEVTNYDRFKSGFEETEKDSA 785
Score = 254 (94.5 bits), Expect = 9.1e-176, Sum P(3) = 9.1e-176
Identities = 64/152 (42%), Positives = 83/152 (54%)
Query: 40 LPGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTE-IELSSLSGILP 98
+P G +FNIGSVDSFE LE AQ + +D Y+PV Y +E + P
Sbjct: 209 IPAKRTGGQYKYYFNIGSVDSFEEKLEEAQEALGVDRHEYVPVTYVSEMVWYQEFMRFAP 268
Query: 99 TLLIIGR---SAEMMXXXXXXXXXXXXXX-----VMEST-AKLINSSDIGVRFKDVAGCE 149
TLL++G A M + ++T + S + FKDVAGC+
Sbjct: 269 TLLLLGTLIYGARRMQGGLGVGGTGGKNGRGIFNIGKATITRADKHSKNKIYFKDVAGCD 328
Query: 150 EAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
EAK EIMEFV+FLKNP++Y DLGAKIPKGA+L
Sbjct: 329 EAKQEIMEFVHFLKNPKKYEDLGAKIPKGALL 360
Score = 106 (42.4 bits), Expect = 4.3e-164, Sum P(4) = 4.3e-164
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 454 LPGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEI 502
+P G +FNIGSVDSFE LE AQ + +D Y+PV Y +E+
Sbjct: 209 IPAKRTGGQYKYYFNIGSVDSFEEKLEEAQEALGVDRHEYVPVTYVSEM 257
Score = 57 (25.1 bits), Expect = 9.1e-176, Sum P(3) = 9.1e-176
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRV 37
++I++++F N +L G+V+ ++V NK +V
Sbjct: 157 QQISFQEFKNKLLEPGLVDHIDVSNKSVAKV 187
Score = 57 (25.1 bits), Expect = 4.3e-164, Sum P(4) = 4.3e-164
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 421 KEITWKDFINNVLTKGIVEKLEVVNKKWVRV 451
++I++++F N +L G+V+ ++V NK +V
Sbjct: 157 QQISFQEFKNKLLEPGLVDHIDVSNKSVAKV 187
Score = 49 (22.3 bits), Expect = 4.3e-164, Sum P(4) = 4.3e-164
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 300 MGVFGGGGGKWRIILSENVPK--GFEKFYP-DKNKKSAEKPKEEGKPSDSTQ 348
+GVF + R S+ PK +E ++P DK + +++ E + S+ +
Sbjct: 71 IGVFANP--RLRRFFSDEAPKKKNYENYFPKDKQEPKSDQKSEHKEGSEKNE 120
Score = 45 (20.9 bits), Expect = 1.1e-163, Sum P(4) = 1.1e-163
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 243 RIILSENVPK--GFEKFYP-DKNKKSAEKPKEEGKPSDSTQ 280
R S+ PK +E ++P DK + +++ E + S+ +
Sbjct: 80 RRFFSDEAPKKKNYENYFPKDKQEPKSDQKSEHKEGSEKNE 120
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 1435 (510.2 bits), Expect = 4.6e-174, Sum P(2) = 4.6e-174
Identities = 296/486 (60%), Positives = 361/486 (74%)
Query: 528 VMESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTG 586
V +S AKL N +DI + FK+VAGC+EAK EIMEFV+FLKNP +Y LGAKIP+GA+L+G
Sbjct: 269 VGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSG 328
Query: 587 PPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDE 646
PPGTGKTLLAKATAGEANVPF++VSGSEF+EMFVGVG SRVRD+F+ AR AP I+FIDE
Sbjct: 329 PPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDE 388
Query: 647 IDAVGRKRG-GRNFGG-HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRP 704
IDA+G++RG G GG + E+E TLNQLLVEMDGF DVLD AL+RP
Sbjct: 389 IDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRP 448
Query: 705 GRFDRQIFVPAPDIKGRASIFKVHLK-----PLKTDLDRDDLSRKLAALTPGFTGADIAN 759
GRFDR I + +PD+ GR I+ VHLK PL TD D ++LS KLA LTPGFTGADIAN
Sbjct: 449 GRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTD-DMNNLSGKLATLTPGFTGADIAN 507
Query: 760 VCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGW 819
CNEAALIAAR I + HFEQAIERV+AG+EKKT VL EEK++VAYHEAGHAV GW
Sbjct: 508 ACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGW 567
Query: 820 FLRYADPLLKVSIIPRGKG-LGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRI 878
FL+YADPLLKVSIIPRG+G LGYAQYLP +QYL S+EQ RM M LGGRVSEE+ F +
Sbjct: 568 FLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQFRHRMIMALGGRVSEELHFPSV 627
Query: 879 TTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVR 938
T+GA DD KKVTQ A A V GM+ K+G +SFD G + KP+S TA+ ID EV+
Sbjct: 628 TSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQ-NDGNFKVNKPFSNKTARTIDLEVK 686
Query: 939 SLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKS-TYEEFVE 997
S++ +A+ LL ++ V+ VA+ LL+KE + R DMI LLG RPF E++ +E++++
Sbjct: 687 SIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLLGPRPFKERNEAFEKYLD 746
Query: 998 GTGSFE 1003
+ E
Sbjct: 747 PKSNTE 752
Score = 278 (102.9 bits), Expect = 4.6e-174, Sum P(2) = 4.6e-174
Identities = 76/188 (40%), Positives = 107/188 (56%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELA 68
+T++DF L KG+V K+ VVNK V +L+ N+ +F IGSVD FE ++
Sbjct: 148 LTFQDFKTKYLEKGLVSKIYVVNKFLVEAELV--NTKQVVSF---TIGSVDIFEEQMDQI 202
Query: 69 QAQMHIDPANYLPVIYKTEIELSS----LSGILPTLLIIG---------RSAEMMXXXXX 115
Q ++I P + +P+ Y IE SS L LPT++++G S+
Sbjct: 203 QDLLNIPPRDRIPIKY---IERSSPFTFLFPFLPTIILLGGLYFITRKINSSPPNANGGG 259
Query: 116 XXXXXXXXXVMESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
V +S AKL N +DI + FK+VAGC+EAK EIMEFV+FLKNP +Y LGAK
Sbjct: 260 GGGLGGMFNVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAK 319
Query: 175 IPKGAMLT 182
IP+GA+L+
Sbjct: 320 IPRGAILS 327
Score = 116 (45.9 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELA 482
+T++DF L KG+V K+ VVNK V +L+ N+ +F IGSVD FE ++
Sbjct: 148 LTFQDFKTKYLEKGLVSKIYVVNKFLVEAELV--NTKQVVSF---TIGSVDIFEEQMDQI 202
Query: 483 QAQMHIDPANYLPVIYKTEIELSS 506
Q ++I P + +P+ Y IE SS
Sbjct: 203 QDLLNIPPRDRIPIKY---IERSS 223
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 1418 (504.2 bits), Expect = 1.7e-172, Sum P(3) = 1.7e-172
Identities = 280/466 (60%), Positives = 352/466 (75%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
+ FKDVAGCEEAK EIMEFV+FL+NP++Y DLGAKIPKGA+L GPPGTGKTLLAKATAGE
Sbjct: 324 IYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 383
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNF-GG 661
+ VPF+++SGS+F+EMFVGVGPSRVR++F AR+ AP I+FIDEIDA+GR RG F GG
Sbjct: 384 SAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGG 443
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+ E+E+TLNQLLVEMDGF D+LDKALLRPGRFDRQI + PDIKGR
Sbjct: 444 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 503
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF+++LK +K D + S++LAALTPGF GADIANVCNEAALIAAR T+ M HF
Sbjct: 504 DQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHF 563
Query: 782 EQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKG-LG 840
+ AI+RV+ G+EKK V+ E++TVAYHE+GHAVAGWFL +A+PLLKV+I+PRG LG
Sbjct: 564 DSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 623
Query: 841 YAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHF 900
+AQY+P E L +KEQL D CMTLGGR +E++ GRI+TGA++DL+KVT+ YAQVA +
Sbjct: 624 FAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGRISTGAQNDLEKVTKMTYAQVAVY 683
Query: 901 GMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVE 960
G ++K+G +SF PQ E KPYS T +ID EVR + AY RT L+ EHK V
Sbjct: 684 GFSDKIGLLSF--PQR-EDEFSKPYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKEQVA 740
Query: 961 KVAERLLKKEILDRNDMIELLGTRPFP--EKSTYEEFVEGTGSFEE 1004
++AE LL+KE+L ++D+ ++LG RPF E + Y+ F G FEE
Sbjct: 741 QIAELLLEKEVLHQDDLTKVLGERPFKSGETTNYDRFKSG---FEE 783
Score = 238 (88.8 bits), Expect = 1.7e-172, Sum P(3) = 1.7e-172
Identities = 62/153 (40%), Positives = 82/153 (53%)
Query: 40 LPGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTE-IELSSLSGILP 98
+P G +FNIGSV+SFE LE AQ + ++ +++PV Y +E I L P
Sbjct: 213 VPAKGRGGQYKYYFNIGSVESFEEKLEEAQEAIGVNSHDFVPVTYVSETIWYQELLRFAP 272
Query: 99 TLLIIGR---SAEMMXXXXXXXXX---XXXXXVMESTAKLINSSDIG----VRFKDVAGC 148
TLL++ A M + I +D + FKDVAGC
Sbjct: 273 TLLLVATLIFGARRMQGGLGGLGGPGGKAGRGIFNIGKAQITRADKNSKNKIYFKDVAGC 332
Query: 149 EEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
EEAK EIMEFV+FL+NP++Y DLGAKIPKGA+L
Sbjct: 333 EEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALL 365
Score = 93 (37.8 bits), Expect = 1.1e-161, Sum P(4) = 1.1e-161
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 454 LPGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTE 501
+P G +FNIGSV+SFE LE AQ + ++ +++PV Y +E
Sbjct: 213 VPAKGRGGQYKYYFNIGSVESFEEKLEEAQEAIGVNSHDFVPVTYVSE 260
Score = 61 (26.5 bits), Expect = 1.1e-161, Sum P(4) = 1.1e-161
Identities = 12/49 (24%), Positives = 29/49 (59%)
Query: 403 LIGSVAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRV 451
L+ +L+ + ++I++++F N +L G+V+ ++V NK+ +V
Sbjct: 143 LMAIALILSTFSLGSREQQQISFQEFKNKLLEAGLVDHIDVSNKEVAKV 191
Score = 58 (25.5 bits), Expect = 1.7e-172, Sum P(3) = 1.7e-172
Identities = 10/31 (32%), Positives = 23/31 (74%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRV 37
++I++++F N +L G+V+ ++V NK+ +V
Sbjct: 161 QQISFQEFKNKLLEAGLVDHIDVSNKEVAKV 191
Score = 51 (23.0 bits), Expect = 1.1e-161, Sum P(4) = 1.1e-161
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 243 RIILSENVPK--GFEKFYPDKNKKSAEKPKEEGKPSDSTQ 280
R S PK +E +YP K+ K A K +++ + D ++
Sbjct: 83 RRFFSSQTPKKKNYENYYP-KDSKKAPKNEQKSESRDGSK 121
Score = 51 (23.0 bits), Expect = 1.1e-161, Sum P(4) = 1.1e-161
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 311 RIILSENVPK--GFEKFYPDKNKKSAEKPKEEGKPSDSTQ 348
R S PK +E +YP K+ K A K +++ + D ++
Sbjct: 83 RRFFSSQTPKKKNYENYYP-KDSKKAPKNEQKSESRDGSK 121
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 1629 (578.5 bits), Expect = 1.8e-167, P = 1.8e-167
Identities = 332/589 (56%), Positives = 418/589 (70%)
Query: 419 NYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERN 478
N +EITW+DF L KG+VE+L VVN+ VRV +L G G+ +F+IGS+DSF+R
Sbjct: 155 NMQEITWQDFRQQFLDKGLVERLVVVNRNMVRV-ILRGGVASGSGQYYFSIGSIDSFDRK 213
Query: 479 LELAQAQMHIDPANYLPVIYKTEIE--------------LSSLSXXXXXXXXXXXXXXXX 524
LE AQ Q+ I P+ ++PV Y E+ + S+
Sbjct: 214 LEDAQRQLGIPPSEFVPVAYHDEVSVLATLLSFAPTLLIIGSVIYLSRRASGAAGGGQGG 273
Query: 525 XXXVMESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM 583
+ +S AK+ N +DI ++F DVAG +EAK EIMEFV FLKNP+ Y LGAKIP+GA+
Sbjct: 274 IFGIGKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAI 333
Query: 584 LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILF 643
L+GPPGTGKTLLAKATAGEANVPF++VSGSEFLEMFVGVGPSRVRD+F+ ARK+APCI+F
Sbjct: 334 LSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIF 393
Query: 644 IDEIDAVGRKRG-GRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALL 702
IDEIDA+G+ RG G FG + E+E+TLNQLLVEMDGF DVLD ALL
Sbjct: 394 IDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALL 453
Query: 703 RPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCN 762
RPGRFDRQI + PDI GR IFKVHLK +K + D ++++LA LT GFTGADI NVCN
Sbjct: 454 RPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCN 513
Query: 763 EAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLR 822
E ALIAAR + M HFEQAIERV AG+EKK+ VL PEEK TVA+HEAGHAVAGWF+
Sbjct: 514 EGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVAGWFME 573
Query: 823 YADPLLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITT 880
Y DPLLKVSIIPR + LGYA YLP++QYL S+ Q+LD+M M L GRVSEEIFFG +IT+
Sbjct: 574 YVDPLLKVSIIPRAQALGYASYLPKDQYLMSRGQILDQMGMALAGRVSEEIFFGPEKITS 633
Query: 881 GAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSL 940
GA DD +KVT+ A A V +GM+ VG +++ P ++KP+SE+TAQ+ID E+R L
Sbjct: 634 GASDDFQKVTRMAQAYVTQYGMSPTVGTIAY--PIDTRETVQKPFSEATAQMIDEEIRKL 691
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEK 989
+ +AY RTK LL+EHK +E +A+RLL+KE++ N++ +LG RP+ K
Sbjct: 692 VKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNEVETILGPRPYAYK 740
Score = 378 (138.1 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 85/182 (46%), Positives = 115/182 (63%)
Query: 5 NYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERN 64
N +EITW+DF L KG+VE+L VVN+ VRV +L G G+ +F+IGS+DSF+R
Sbjct: 155 NMQEITWQDFRQQFLDKGLVERLVVVNRNMVRV-ILRGGVASGSGQYYFSIGSIDSFDRK 213
Query: 65 LELAQAQMHIDPANYLPVIYKTEIE-LSSLSGILPTLLIIGRSAEMMXXXXXXXXXXXXX 123
LE AQ Q+ I P+ ++PV Y E+ L++L PTLLIIG +
Sbjct: 214 LEDAQRQLGIPPSEFVPVAYHDEVSVLATLLSFAPTLLIIGSVIYLSRRASGAAGGGQGG 273
Query: 124 X--VMESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAM 180
+ +S AK+ N +DI ++F DVAG +EAK EIMEFV FLKNP+ Y LGAKIP+GA+
Sbjct: 274 IFGIGKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAI 333
Query: 181 LT 182
L+
Sbjct: 334 LS 335
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 1460 (519.0 bits), Expect = 5.0e-166, Sum P(2) = 5.0e-166
Identities = 298/554 (53%), Positives = 385/554 (69%)
Query: 461 GANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTE--------------IELSS 506
G NF +F IGS+DSFE L+ AQ ++ ID +PV+Y E + ++
Sbjct: 248 GRNFYYFTIGSIDSFEHKLQKAQDELDIDKDFRIPVLYVQEGNWAKAMFQILPTVLMIAG 307
Query: 507 LSXXXXXXXXXXXXXXXXXXXVMESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFL 565
+ + S AK N+ +D+ ++FKDVAGC+EAK EIMEFV+FL
Sbjct: 308 IIWLTRRSAQAAGGSRGGIFGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFL 367
Query: 566 KNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPS 625
K P +Y +GAKIP+GA+L+GPPGTGKTLLAKATAGEA VPF VSGSEF+EMFVGVG +
Sbjct: 368 KEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAA 427
Query: 626 RVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG-HSEQENTLNQLLVEMDGFXXXXX 684
RVRD+F AR++AP I+FIDEIDA+G+ R NF G + E+ENTLNQ+LVEMDGF
Sbjct: 428 RVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADH 487
Query: 685 XXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRK 744
D+LDKALLRPGRFDR I + P+++GR +IF VHL LK + DL +
Sbjct: 488 VVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNR 547
Query: 745 LAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEK 804
LAALTPGF+GADIANVCNEAALIAAR + + HFEQAIERV+ G+E+K+ +L PEEK
Sbjct: 548 LAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEK 607
Query: 805 KTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKG-LGYAQYLPREQYLYSKEQLLDRMCM 863
K VAYHEAGHAV GW+L+YADPLLKVSIIPRG+G LGYAQYLP + +L +++QL DRM M
Sbjct: 608 KVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQLKDRMTM 667
Query: 864 TLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEK 923
+LGGRVSEE+ F +T+GA DD KKVT A A V GM++K+G V++ + L K
Sbjct: 668 SLGGRVSEELHFPSVTSGASDDFKKVTSMATAMVTELGMSDKIGWVNYQKRDDSD--LTK 725
Query: 924 PYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGT 983
P+S+ T +ID+EV ++ + R LL E VEK+A+ LLKKE+L R DMI+LLG
Sbjct: 726 PFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGK 785
Query: 984 RPFPEKS-TYEEFV 996
RPFPE++ +++++
Sbjct: 786 RPFPERNDAFDKYL 799
Score = 342 (125.4 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 81/183 (44%), Positives = 110/183 (60%)
Query: 8 EITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPG--NSMD--GANFLWFNIGSVDSFER 63
EITW+DF +L KG V KL VVNK V+V L N D G NF +F IGS+DSFE
Sbjct: 205 EITWQDFREKLLAKGYVAKLIVVNKSMVKVMLNDNGKNQADNYGRNFYYFTIGSIDSFEH 264
Query: 64 NLELAQAQMHIDPANYLPVIYKTEIELS-SLSGILPTLLIIGRSAEMMXXXXXXXXXXXX 122
L+ AQ ++ ID +PV+Y E + ++ ILPT+L+I +
Sbjct: 265 KLQKAQDELDIDKDFRIPVLYVQEGNWAKAMFQILPTVLMIAGIIWLTRRSAQAAGGSRG 324
Query: 123 XX--VMESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGA 179
+ S AK N+ +D+ ++FKDVAGC+EAK EIMEFV+FLK P +Y +GAKIP+GA
Sbjct: 325 GIFGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGA 384
Query: 180 MLT 182
+L+
Sbjct: 385 ILS 387
Score = 177 (67.4 bits), Expect = 5.0e-166, Sum P(2) = 5.0e-166
Identities = 41/84 (48%), Positives = 51/84 (60%)
Query: 422 EITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPG--NSMD--GANFLWFNIGSVDSFER 477
EITW+DF +L KG V KL VVNK V+V L N D G NF +F IGS+DSFE
Sbjct: 205 EITWQDFREKLLAKGYVAKLIVVNKSMVKVMLNDNGKNQADNYGRNFYYFTIGSIDSFEH 264
Query: 478 NLELAQAQMHIDPANYLPVIYKTE 501
L+ AQ ++ ID +PV+Y E
Sbjct: 265 KLQKAQDELDIDKDFRIPVLYVQE 288
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 1443 (513.0 bits), Expect = 4.1e-162, Sum P(2) = 4.1e-162
Identities = 298/563 (52%), Positives = 387/563 (68%)
Query: 455 PGNSMDGANFLW-FNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIELSS--LSXX- 510
P + NF + F +GSV+SFER L+ AQ ++ I + +PV Y E+ + LS
Sbjct: 296 PDSPAASPNFYYYFTVGSVESFERKLDQAQFELGIPTSERIPVSYVDEVPWMATVLSFGP 355
Query: 511 ----------XXXXXXXXXXXXXXXXXVMESTAKLIN-SSDIGVRFKDVAGCEEAKVEIM 559
+ +S A+ N +D+ ++F DVAG +EAKVEIM
Sbjct: 356 TLLFMGGLFYLSRRAGSASAGRNGIFGIGKSRARRFNHETDVKIKFSDVAGMDEAKVEIM 415
Query: 560 EFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMF 619
EFV+FLK+P+++ LGAKIP+GA+L+GPPGTGKTLLAKATAGE+ VPF +VSGSEF+EMF
Sbjct: 416 EFVSFLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMF 475
Query: 620 VGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNF-GGHSEQENTLNQLLVEMDG 678
VGVGPSRVRD+F+ ARK+ PCI+FIDEIDA+G+ R +NF GG+ E+E+TLNQ+L EMDG
Sbjct: 476 VGVGPSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSGGNDERESTLNQILTEMDG 535
Query: 679 FXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDR 738
F DVLDKAL+RPGRFDR I + P + GR IF+VHLK + T D
Sbjct: 536 FNTSDQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRKQIFRVHLKKIVTKEDM 595
Query: 739 DDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNV 798
D L+ +L+ALTPGF GADIAN NEAAL+AAR+ ++ MKHFE+AIERVV G+EKK+ V
Sbjct: 596 DYLTGRLSALTPGFAGADIANCVNEAALVAARENAESVTMKHFERAIERVVGGLEKKSLV 655
Query: 799 LQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKG-LGYAQYLPR--EQYLYSKE 855
L PEEK+TVAYHEAGHA+ GW+ R+ADPLLKVSIIPRG+G LGYAQYLP + YL +
Sbjct: 656 LSPEEKRTVAYHEAGHAICGWYFRWADPLLKVSIIPRGQGALGYAQYLPANGDTYLMTAN 715
Query: 856 QLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQ 915
Q++DRM MTLGGRVSEE+ F +T+GA DD KVT+ A A V FGM+ K+ + ++
Sbjct: 716 QMMDRMAMTLGGRVSEELHFDTVTSGASDDFNKVTRLATAMVTKFGMSPKLKYIYYE-ED 774
Query: 916 PGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRN 975
P L KP+SE TA+ ID EVR +++ AY + + LL K V VAE LL KE+L R+
Sbjct: 775 PSSQ-LHKPFSEETAKDIDIEVRRIVNEAYKQCRDLLTAKKKEVGLVAEELLAKEVLSRD 833
Query: 976 DMIELLGTRPFPEKSTYEEFVEG 998
DM+ LLG R +PE + ++ +G
Sbjct: 834 DMVRLLGPREWPESGEFAKYFDG 856
Score = 314 (115.6 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 74/190 (38%), Positives = 114/190 (60%)
Query: 5 NYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKL--------LPGNSMDGANFLW-FNI 55
N K+ITW++F + L KG+VE+L V N+ VRV+L P + NF + F +
Sbjct: 252 NSKDITWEEFRSKFLDKGLVERLTVTNRTRVRVELNRDAVARTYPDSPAASPNFYYYFTV 311
Query: 56 GSVDSFERNLELAQAQMHIDPANYLPVIYKTEIE-LSSLSGILPTLLIIGRSAEMMXXXX 114
GSV+SFER L+ AQ ++ I + +PV Y E+ ++++ PTLL +G +
Sbjct: 312 GSVESFERKLDQAQFELGIPTSERIPVSYVDEVPWMATVLSFGPTLLFMGGLFYLSRRAG 371
Query: 115 XXXXXXXXXX-VMESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLG 172
+ +S A+ N +D+ ++F DVAG +EAKVEIMEFV+FLK+P+++ LG
Sbjct: 372 SASAGRNGIFGIGKSRARRFNHETDVKIKFSDVAGMDEAKVEIMEFVSFLKSPERFQKLG 431
Query: 173 AKIPKGAMLT 182
AKIP+GA+L+
Sbjct: 432 AKIPRGAILS 441
Score = 157 (60.3 bits), Expect = 4.1e-162, Sum P(2) = 4.1e-162
Identities = 37/93 (39%), Positives = 55/93 (59%)
Query: 419 NYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKL--------LPGNSMDGANFLW-FNI 469
N K+ITW++F + L KG+VE+L V N+ VRV+L P + NF + F +
Sbjct: 252 NSKDITWEEFRSKFLDKGLVERLTVTNRTRVRVELNRDAVARTYPDSPAASPNFYYYFTV 311
Query: 470 GSVDSFERNLELAQAQMHIDPANYLPVIYKTEI 502
GSV+SFER L+ AQ ++ I + +PV Y E+
Sbjct: 312 GSVESFERKLDQAQFELGIPTSERIPVSYVDEV 344
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 776 (278.2 bits), Expect = 2.6e-161, Sum P(3) = 2.6e-161
Identities = 154/276 (55%), Positives = 202/276 (73%)
Query: 732 LKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAG 791
LK + + + L+ +LAALTPGF GADIAN CNE ALIAAR+ + HFEQAIERV+AG
Sbjct: 496 LKNE-EIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAG 554
Query: 792 MEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKG-LGYAQYLPREQY 850
+EKK+ +L PEEKKTVAYHEAGHA+ GWFL+YADPL+KVSIIPRG+G LGYAQYLP++QY
Sbjct: 555 LEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQYLPKDQY 614
Query: 851 LYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVS 910
L S+EQ RM MTLGGRVSEE+ F +T+GA DD KK+TQ A + GM++K+G +
Sbjct: 615 LTSQEQFKHRMIMTLGGRVSEELHFDTVTSGASDDFKKITQMAQQMILKLGMSDKLGQIC 674
Query: 911 FDMPQP-GE-MVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLK 968
+D G + YSE+TA++ID EV+ LI +Y LL E V+KVAE L K
Sbjct: 675 YDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDKVAEELFK 734
Query: 969 KEILDRNDMIELLGTRPFPEKS-TYEEFVEGTGSFE 1003
KE+L R DMI++ G RPFPE++ ++++++G +F+
Sbjct: 735 KEVLTREDMIKICGPRPFPERNDAFDKYLQGEDAFK 770
Score = 688 (247.2 bits), Expect = 2.6e-161, Sum P(3) = 2.6e-161
Identities = 134/217 (61%), Positives = 166/217 (76%)
Query: 530 ESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPP 588
+S AKL N +++ ++FKDVAGC+E+K EIMEFV FL++P +Y LGAKIP+GA+L+GPP
Sbjct: 270 KSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPP 329
Query: 589 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEID 648
GTGKTLLAKATAGEA VPF++VSGSEF+EMFVGVG SRVRD+F AR+ AP I+F+DEID
Sbjct: 330 GTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEID 389
Query: 649 AVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFD 708
A+G++RG GG+ E+ENTLNQLLVEMDGF D+LDKALLRPGRFD
Sbjct: 390 AIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFD 449
Query: 709 RQIFVPAPDIKGRASIFKVHLKPLKTDLDRD-DLSRK 744
R I + PD++GR IFKVHL LK +D D +K
Sbjct: 450 RHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQK 486
Score = 310 (114.2 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 75/196 (38%), Positives = 114/196 (58%)
Query: 3 EMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPG------NSMDGANFLWFNIG 56
E +++T++DFI N + KG+V KL VVNK V +L+PG ++ +G ++ F IG
Sbjct: 131 ESEIQQLTFQDFITNYIEKGLVTKLTVVNKAVVEAELIPGAVSNISHNRNGKPYVVFTIG 190
Query: 57 SVDSFERNLELAQAQMHIDPANYLPVIYKTEIE-LSSLSGILPTLLIIG-----RSAEMM 110
S++ FE + Q ++ I LPV+Y+ LS + ILPT+L+IG M
Sbjct: 191 SLEFFEDEMNKVQDRLKIPINERLPVVYEDHTSWLSYIMPILPTVLLIGGLYYLTMRRMP 250
Query: 111 XXXXXXXXXXXXXXVME---STAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQ 166
+ + S AKL N +++ ++FKDVAGC+E+K EIMEFV FL++P
Sbjct: 251 GGAGGAGGAGGPGGIFKIGKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPH 310
Query: 167 QYIDLGAKIPKGAMLT 182
+Y LGAKIP+GA+L+
Sbjct: 311 KYEKLGAKIPRGAILS 326
Score = 144 (55.7 bits), Expect = 2.6e-161, Sum P(3) = 2.6e-161
Identities = 32/89 (35%), Positives = 53/89 (59%)
Query: 417 EMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPG------NSMDGANFLWFNIG 470
E +++T++DFI N + KG+V KL VVNK V +L+PG ++ +G ++ F IG
Sbjct: 131 ESEIQQLTFQDFITNYIEKGLVTKLTVVNKAVVEAELIPGAVSNISHNRNGKPYVVFTIG 190
Query: 471 SVDSFERNLELAQAQMHIDPANYLPVIYK 499
S++ FE + Q ++ I LPV+Y+
Sbjct: 191 SLEFFEDEMNKVQDRLKIPINERLPVVYE 219
Score = 38 (18.4 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 738 RDDLSRKLAALTPGFTGAD 756
R++L +K AA PG T D
Sbjct: 80 REELKKKFAAKHPG-TNPD 97
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 776 (278.2 bits), Expect = 2.6e-161, Sum P(3) = 2.6e-161
Identities = 154/276 (55%), Positives = 202/276 (73%)
Query: 732 LKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAG 791
LK + + + L+ +LAALTPGF GADIAN CNE ALIAAR+ + HFEQAIERV+AG
Sbjct: 496 LKNE-EIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAG 554
Query: 792 MEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKG-LGYAQYLPREQY 850
+EKK+ +L PEEKKTVAYHEAGHA+ GWFL+YADPL+KVSIIPRG+G LGYAQYLP++QY
Sbjct: 555 LEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQYLPKDQY 614
Query: 851 LYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVS 910
L S+EQ RM MTLGGRVSEE+ F +T+GA DD KK+TQ A + GM++K+G +
Sbjct: 615 LTSQEQFKHRMIMTLGGRVSEELHFDTVTSGASDDFKKITQMAQQMILKLGMSDKLGQIC 674
Query: 911 FDMPQP-GE-MVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLK 968
+D G + YSE+TA++ID EV+ LI +Y LL E V+KVAE L K
Sbjct: 675 YDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDKVAEELFK 734
Query: 969 KEILDRNDMIELLGTRPFPEKS-TYEEFVEGTGSFE 1003
KE+L R DMI++ G RPFPE++ ++++++G +F+
Sbjct: 735 KEVLTREDMIKICGPRPFPERNDAFDKYLQGEDAFK 770
Score = 688 (247.2 bits), Expect = 2.6e-161, Sum P(3) = 2.6e-161
Identities = 134/217 (61%), Positives = 166/217 (76%)
Query: 530 ESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPP 588
+S AKL N +++ ++FKDVAGC+E+K EIMEFV FL++P +Y LGAKIP+GA+L+GPP
Sbjct: 270 KSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPP 329
Query: 589 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEID 648
GTGKTLLAKATAGEA VPF++VSGSEF+EMFVGVG SRVRD+F AR+ AP I+F+DEID
Sbjct: 330 GTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEID 389
Query: 649 AVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFD 708
A+G++RG GG+ E+ENTLNQLLVEMDGF D+LDKALLRPGRFD
Sbjct: 390 AIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFD 449
Query: 709 RQIFVPAPDIKGRASIFKVHLKPLKTDLDRD-DLSRK 744
R I + PD++GR IFKVHL LK +D D +K
Sbjct: 450 RHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQK 486
Score = 310 (114.2 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 75/196 (38%), Positives = 114/196 (58%)
Query: 3 EMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPG------NSMDGANFLWFNIG 56
E +++T++DFI N + KG+V KL VVNK V +L+PG ++ +G ++ F IG
Sbjct: 131 ESEIQQLTFQDFITNYIEKGLVTKLTVVNKAVVEAELIPGAVSNISHNRNGKPYVVFTIG 190
Query: 57 SVDSFERNLELAQAQMHIDPANYLPVIYKTEIE-LSSLSGILPTLLIIG-----RSAEMM 110
S++ FE + Q ++ I LPV+Y+ LS + ILPT+L+IG M
Sbjct: 191 SLEFFEDEMNKVQDRLKIPINERLPVVYEDHTSWLSYIMPILPTVLLIGGLYYLTMRRMP 250
Query: 111 XXXXXXXXXXXXXXVME---STAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQ 166
+ + S AKL N +++ ++FKDVAGC+E+K EIMEFV FL++P
Sbjct: 251 GGAGGAGGAGGPGGIFKIGKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPH 310
Query: 167 QYIDLGAKIPKGAMLT 182
+Y LGAKIP+GA+L+
Sbjct: 311 KYEKLGAKIPRGAILS 326
Score = 144 (55.7 bits), Expect = 2.6e-161, Sum P(3) = 2.6e-161
Identities = 32/89 (35%), Positives = 53/89 (59%)
Query: 417 EMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPG------NSMDGANFLWFNIG 470
E +++T++DFI N + KG+V KL VVNK V +L+PG ++ +G ++ F IG
Sbjct: 131 ESEIQQLTFQDFITNYIEKGLVTKLTVVNKAVVEAELIPGAVSNISHNRNGKPYVVFTIG 190
Query: 471 SVDSFERNLELAQAQMHIDPANYLPVIYK 499
S++ FE + Q ++ I LPV+Y+
Sbjct: 191 SLEFFEDEMNKVQDRLKIPINERLPVVYE 219
Score = 38 (18.4 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 738 RDDLSRKLAALTPGFTGAD 756
R++L +K AA PG T D
Sbjct: 80 REELKKKFAAKHPG-TNPD 97
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 326/636 (51%), Positives = 426/636 (66%)
Query: 399 FMYGLIGSVAVLAAAVMYEMNYK-EITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLP-G 456
F+Y L+ S+A M N EI ++ F+ + LTK +V+K+ V+N V V+L G
Sbjct: 210 FIYTLVFSLATSLILGMGSSNDDTEINFQSFVTDYLTKNLVKKVTVINNSVVEVELNENG 269
Query: 457 NSMDGANF-LWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKTEIELSS--------- 506
S L+F IGSV+SFERNL AQ + I P +P+ Y T+ ++
Sbjct: 270 ASQHNQQKRLYFTIGSVESFERNLREAQDKYDIPPQLRVPIHYTTKGNMARFLINFLPTL 329
Query: 507 LSXXXXXXXXXXXXXXXXXXXVM---ESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFV 562
L M +STAK N +D+ ++FKDVAG EAK E+MEFV
Sbjct: 330 LFLGAIYWMTKKAASSMGGMGPMGFGKSTAKKFNQETDVKIKFKDVAGMAEAKQEVMEFV 389
Query: 563 NFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGV 622
FL+NP++Y LGAKIP+GA+L+GPPGTGKTLLAKATAGEA VPF +VSGSEF+EMFVGV
Sbjct: 390 KFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYSVSGSEFVEMFVGV 449
Query: 623 GPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG-GRNFGGHSEQENTLNQLLVEMDGFXX 681
G SRVRD+F AR++AP I+F+DEIDA+G++R G G + E+E TLNQLLVEMDGF
Sbjct: 450 GASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATGANDERETTLNQLLVEMDGFDT 509
Query: 682 XXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRD-D 740
D+LD+AL+RPGRFDR + + P++ GR IF VHL+ + D D D
Sbjct: 510 SDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRKEIFDVHLQKITLQKDIDPD 569
Query: 741 LSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQ 800
LS +LAALTPGF+GADIANVCNEAALIAAR + ++HFE AIERV+ G+EKK+ +L
Sbjct: 570 LSGRLAALTPGFSGADIANVCNEAALIAARYNAEFVTLRHFELAIERVIGGVEKKSKLLN 629
Query: 801 PEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKG-LGYAQYLPREQYLYSKEQLLD 859
PEE+K VAYHEAGHA+ GW+L+YA PLLKVSIIPRG+G LGYAQYLP +QYL S QL D
Sbjct: 630 PEEQKIVAYHEAGHAICGWYLKYAHPLLKVSIIPRGQGALGYAQYLPPDQYLMSTLQLYD 689
Query: 860 RMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSF-DMPQPGE 918
RM MTLGGRVSEE+ F +T+GA DD KKVT A + V FGM++ VG V++ D +
Sbjct: 690 RMIMTLGGRVSEELHFASVTSGAHDDFKKVTGIAQSMVLRFGMSKTVGMVNYYDTRSQDD 749
Query: 919 MVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMI 978
L KP+S+ T+++ID+EV+ ++S+ Y + K LL E VE VA+ LLKKE + R DMI
Sbjct: 750 --LTKPFSDETSRIIDSEVQRIVSDCYQKCKQLLTEKSKEVELVAQELLKKEFITREDMI 807
Query: 979 ELLGTRPFPEKS-TYEEFVEGTGSFEEDTSLPEGLK 1013
LLG RPFPE + ++++++G +F+ + PE K
Sbjct: 808 RLLGKRPFPETNDAFDKYLDGKPAFKNEQ--PENEK 841
Score = 317 (116.6 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 76/179 (42%), Positives = 106/179 (59%)
Query: 8 EITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLP-GNSMDGANF-LWFNIGSVDSFERNL 65
EI ++ F+ + LTK +V+K+ V+N V V+L G S L+F IGSV+SFERNL
Sbjct: 234 EINFQSFVTDYLTKNLVKKVTVINNSVVEVELNENGASQHNQQKRLYFTIGSVESFERNL 293
Query: 66 ELAQAQMHIDPANYLPVIYKTEIELSS-LSGILPTLLIIGRSAEMMXXXXXXXXXXXXXX 124
AQ + I P +P+ Y T+ ++ L LPTLL +G M
Sbjct: 294 REAQDKYDIPPQLRVPIHYTTKGNMARFLINFLPTLLFLGAIYWMTKKAASSMGGMGPMG 353
Query: 125 VMESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
+STAK N +D+ ++FKDVAG EAK E+MEFV FL+NP++Y LGAKIP+GA+L+
Sbjct: 354 FGKSTAKKFNQETDVKIKFKDVAGMAEAKQEVMEFVKFLQNPEKYEKLGAKIPRGAILS 412
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 1218 (433.8 bits), Expect = 4.6e-148, Sum P(2) = 4.6e-148
Identities = 234/451 (51%), Positives = 323/451 (71%)
Query: 542 GVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
G+ FKDVAG EAK+E+ EFV++LKNP +Y+ LGAK+PKGA+L GPPG GKTLLAKA A
Sbjct: 278 GIGFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 337
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
EA VPF+ ++GSEF+E+ G+G +RVR +F A+ APCI++IDEIDAVG+KR G
Sbjct: 338 EAQVPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNVSGF 397
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
++E+E TLNQLLVEMDG DVLD AL+RPGR DR IF+ P ++
Sbjct: 398 ANAEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQE 457
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
R IF+ HLK LK D S+ LA LTPGF+GADIAN+CNEAAL AAR+ H +I +
Sbjct: 458 RREIFEQHLKGLKLIQDASFYSQHLAELTPGFSGADIANICNEAALHAAREGHKSIDTFN 517
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-GKGL 839
FE A+ERV+AG K+ +L PEE+K VA+HE+GHA+ GW L + + ++KVSI PR L
Sbjct: 518 FEYAVERVIAGTAKRNKILSPEERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 577
Query: 840 GYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAH 899
G+AQ LPREQYL++KEQLL+RMCM LGGRVSE I F ++TTGA+DDLK+VT+ AY+ V
Sbjct: 578 GFAQILPREQYLFTKEQLLERMCMALGGRVSEAITFNKVTTGAQDDLKRVTKIAYSMVKQ 637
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
+GM +G +SF + + +P+S+ Q++D+E + L++ AY RT+ LL++++ +
Sbjct: 638 YGMVPSIGQISFPDGESTVGIGRRPFSQGLQQMMDHEAKVLVAQAYRRTEKLLLDNRDKL 697
Query: 960 EKVAERLLKKEILDRNDMIELLGTRPF-PEK 989
+ ++ LL+KE+++ +D+ L+G P+ P+K
Sbjct: 698 QTLSNALLEKEVINYDDIEALIGPPPYGPKK 728
Score = 249 (92.7 bits), Expect = 4.6e-148, Sum P(2) = 4.6e-148
Identities = 61/183 (33%), Positives = 100/183 (54%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG---ANFLW-FNIGSVDSFER 63
I+W FIN +L+KG V+++EVV + V + L PG + G L+ + ++D FE
Sbjct: 138 ISWNYFINEMLSKGEVQRIEVVPESDIVEIYLHPGGTPHGQVNVTLLYTMRVANIDKFEE 197
Query: 64 NLELAQAQMHIDPANYLPVIYKTE-IELSSLSGILPTLLIIGRS---AEMMXXXXXXXXX 119
L A+ +++ID +PV YK + + +L TL+ + ++
Sbjct: 198 KLRAAEDELNIDERERIPVSYKHPGFYGNDVISLLVTLVAVSMLWSIFRLIRVAGRAGGF 257
Query: 120 XXXXXVMESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 178
+ + +++ S G+ FKDVAG EAK+E+ EFV++LKNP +Y+ LGAK+PKG
Sbjct: 258 NAFNQLKMARFTIVDGKSGKGIGFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKG 317
Query: 179 AML 181
A+L
Sbjct: 318 ALL 320
Score = 125 (49.1 bits), Expect = 5.9e-135, Sum P(2) = 5.9e-135
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG---ANFLW-FNIGSVDSFER 477
I+W FIN +L+KG V+++EVV + V + L PG + G L+ + ++D FE
Sbjct: 138 ISWNYFINEMLSKGEVQRIEVVPESDIVEIYLHPGGTPHGQVNVTLLYTMRVANIDKFEE 197
Query: 478 NLELAQAQMHIDPANYLPVIYK 499
L A+ +++ID +PV YK
Sbjct: 198 KLRAAEDELNIDERERIPVSYK 219
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 1414 (502.8 bits), Expect = 1.4e-146, Sum P(2) = 1.4e-146
Identities = 300/600 (50%), Positives = 401/600 (66%)
Query: 422 EITWKDFINNVLTKGIVEKLEVVNKKWVRV-KLLP---GNSMDGANFLWFNIGSVDSFER 477
EI ++ F N +L + + + N V K+ P G+ + I S + F+R
Sbjct: 216 EIDYQTFRNKILPNAEIHSILLTNTTAEVVEKVQPEVGGSGIGSLKVHTITIISPEDFQR 275
Query: 478 NLELAQAQMHIDPAN---YLPVIYKTEI--ELSSLSXXXXXXXXXXXXXXXXXXXVMEST 532
L+ Q + I P N + + +I EL ++S + +
Sbjct: 276 KLQEDQDALGI-PLNKQVFATFNHTNKILRELVAISPTLLMIGLLIYFSRGINSSLTKGA 334
Query: 533 AKLINSSDIGVR------FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTG 586
+ L S V+ FKDVAG +EAK EIMEFV+FLK+P +Y LGA+IPKGA+L+G
Sbjct: 335 SSLFKSKSKAVKATSTTTFKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKGAILSG 394
Query: 587 PPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDE 646
PPGTGKTLLAKATAGEA V F T+SGS+F+EMFVGVGPSRVRD+F AR + PCI+FIDE
Sbjct: 395 PPGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDE 454
Query: 647 IDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGR 706
IDAVGR R F + E+ENTLNQLLVEMDGF DVLD ALLRPGR
Sbjct: 455 IDAVGRARSRGGFH-NDERENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGR 513
Query: 707 FDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAAL 766
FDRQI+V PDIKGR IF VHLK +K D + +++++KLA LTPGF+GADIANVCNE AL
Sbjct: 514 FDRQIYVGKPDIKGRKDIFMVHLKNIKLDGEMEEIAKKLATLTPGFSGADIANVCNEGAL 573
Query: 767 IAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADP 826
+AAR T+ HFE+AIERV+ G++++ VL PEE+ VA+HEAGHAV GWFL + DP
Sbjct: 574 VAARKDATSANFDHFEEAIERVLVGLKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTDP 633
Query: 827 LLKVSIIPRGKG-LGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDD 885
LLKVSI+PRG G LG+AQY P++QYLY++EQL DR+C++LGGR++E I F RI+TGA DD
Sbjct: 634 LLKVSIVPRGSGTLGFAQYQPKDQYLYTREQLFDRICVSLGGRIAESIIFDRISTGAMDD 693
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L KVT+ A A V ++GM+EKVG SF + ++ + KPYS++TA++ID E+R ++++AY
Sbjct: 694 LDKVTKMASASVVNYGMSEKVGVASF-RKEGDDITVVKPYSQATARMIDEEIRRMVNDAY 752
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEED 1005
++T LL E K + K+A LL+KE++ R+D+ +LG RP+ E++T+ E TG E +
Sbjct: 753 SKTTQLLHEKKELLIKLATILLEKEVIQRDDLRTILGPRPYGEQTTWAEL---TGETENE 809
Score = 193 (73.0 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 60/181 (33%), Positives = 87/181 (48%)
Query: 8 EITWKDFINNVLTKGIVEKLEVVNKKWVRV-KLLP---GNSMDGANFLWFNIGSVDSFER 63
EI ++ F N +L + + + N V K+ P G+ + I S + F+R
Sbjct: 216 EIDYQTFRNKILPNAEIHSILLTNTTAEVVEKVQPEVGGSGIGSLKVHTITIISPEDFQR 275
Query: 64 NLELAQAQMHIDPAN--YLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXXXX 121
L+ Q + I P N T L L I PTLL+IG
Sbjct: 276 KLQEDQDALGI-PLNKQVFATFNHTNKILRELVAISPTLLMIGLLI-YFSRGINSSLTKG 333
Query: 122 XXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+ +S +K + ++ FKDVAG +EAK EIMEFV+FLK+P +Y LGA+IPKGA+L
Sbjct: 334 ASSLFKSKSKAVKATST-TTFKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKGAIL 392
Query: 182 T 182
+
Sbjct: 393 S 393
Score = 39 (18.8 bits), Expect = 1.4e-146, Sum P(2) = 1.4e-146
Identities = 22/98 (22%), Positives = 38/98 (38%)
Query: 174 KIPKGAMLTERNKSRMAQRMLCTAKKLERFLLHNINHGRYSSFHINNSLATLPKSNFPPT 233
KIP+ + N +R + C F + I + + I ++ S+ PP
Sbjct: 45 KIPQSIIDNNNNSNRNILK--CNI--YSSFNNNKIENNKLFISEIQSNFKRFSSSSPPPK 100
Query: 234 TVESVLHQWRIILSENVPKGFEKFYPDKNKKSAEKPKE 271
+ + ++ + EN + K DKNK E KE
Sbjct: 101 SPKDEDNEKKF---ENEKETTVK--QDKNKNDVENKKE 133
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
Identities = 306/607 (50%), Positives = 401/607 (66%)
Query: 396 EKYFMYGL-IGSVAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLL 454
+KY + + IG + L E N EI + +F++ L++ K+ VV + L
Sbjct: 147 KKYLITVISIGVILSLFRPNTEEGN--EIKFSEFLDE-LSENKPSKI-VVTDGYANTYKL 202
Query: 455 PGNSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPVIYKT----EIELSSLSXX 510
+ + + F IG FE +E Q+ + I + ++P+ Y + L +
Sbjct: 203 NDDGVTYSITNSFKIGDKKVFEEQVEKVQSDLGIPKSQFIPISYHEYFDPRVALIQVIPY 262
Query: 511 XXXXXXXXXXXXXXXXXVM----ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLK 566
M +STA S V+F DVAG EAKVEI EFVNFLK
Sbjct: 263 AIIGYLIFRTFRSIKSNKMFSQGKSTANKFEKSTSTVKFSDVAGLGEAKVEIEEFVNFLK 322
Query: 567 NPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSR 626
NP+++ D+GAKIP+GA+L GPPGTGKTL+AKATAGEANVPF + SGS+F+EMFVGVGPSR
Sbjct: 323 NPKKFHDIGAKIPRGAILVGPPGTGKTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSR 382
Query: 627 VRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG-HSEQENTLNQLLVEMDGFXXXXXX 685
VRD+F ARK+APCI+FIDEIDAVGR RG F G + E+ENTLNQLLVEMDGF
Sbjct: 383 VRDLFEQARKNAPCIVFIDEIDAVGRARGKGGFSGSNDERENTLNQLLVEMDGFKPLKNV 442
Query: 686 XXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRD-DLSRK 744
D+LDKALLRPGRFDRQI + PD+K R IF+VHL L LD+ + + +
Sbjct: 443 VVLAATNRPDILDKALLRPGRFDRQITIDNPDLKSREEIFRVHLAALL--LDKSINYAER 500
Query: 745 LAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEK 804
L+ LTPGF+GADIANVCNEAALIAAR I ++HF+ A++RV+ G+EKK VL P EK
Sbjct: 501 LSKLTPGFSGADIANVCNEAALIAARRHAEIITLEHFDAAVDRVIGGLEKKNKVLSPTEK 560
Query: 805 KTVAYHEAGHAVAGWFLRYADPLLKVSIIPRG-KGLGYAQYLPREQYLYSKEQLLDRMCM 863
+TVAYHEAGHAV WFL++ PLLKVSI+PRG LGYAQYLP+EQ+L ++EQ+ D MCM
Sbjct: 561 RTVAYHEAGHAVVSWFLKHCHPLLKVSIVPRGVAALGYAQYLPKEQFLQNQEQIFDMMCM 620
Query: 864 TLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEK 923
LGGRV+E++ FG ITTGA+DDL+K+T+ AY+QV+ +GMNEK+G +S+ Q G L K
Sbjct: 621 ALGGRVAEQLTFGTITTGAQDDLEKITKMAYSQVSIYGMNEKIGPLSYQKGQDGSD-LTK 679
Query: 924 PYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGT 983
PYSE TA+++D EVR L+ +AY RT +L EH+ + VA LL+KE++ ++ +LG
Sbjct: 680 PYSEETAEVMDEEVRKLLKSAYDRTTQVLQEHREGLISVANLLLEKEVIHFEEVEAVLGP 739
Query: 984 RPFPEKS 990
RPF K+
Sbjct: 740 RPFNNKT 746
Score = 198 (74.8 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 57/175 (32%), Positives = 89/175 (50%)
Query: 8 EITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLEL 67
EI + +F++ L++ K+ VV + L + + + F IG FE +E
Sbjct: 172 EIKFSEFLDE-LSENKPSKI-VVTDGYANTYKLNDDGVTYSITNSFKIGDKKVFEEQVEK 229
Query: 68 AQAQMHIDPANYLPVIYKTEIELS-SLSGILPTLLIIGRSAEMMXXXXXXXXXXXXXXVM 126
Q+ + I + ++P+ Y + +L ++P IIG ++
Sbjct: 230 VQSDLGIPKSQFIPISYHEYFDPRVALIQVIP-YAIIGY---LIFRTFRSIKSNKMFSQG 285
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+STA S V+F DVAG EAKVEI EFVNFLKNP+++ D+GAKIP+GA+L
Sbjct: 286 KSTANKFEKSTSTVKFSDVAGLGEAKVEIEEFVNFLKNPKKFHDIGAKIPRGAIL 340
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 1185 (422.2 bits), Expect = 1.0e-143, Sum P(2) = 1.0e-143
Identities = 234/451 (51%), Positives = 314/451 (69%)
Query: 542 GVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
GV FKDVAG EAK+E+ EFV++LKNP +Y+ LGAK+PKG++L GPPG GKTLLAKA A
Sbjct: 296 GVSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVAT 355
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
EA VPF+ ++GSEF+E+ G+G +RVR +F AR APCI++IDEIDAVG+KR N G
Sbjct: 356 EAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRS-TNMSG 414
Query: 662 HS--EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIK 719
S E+E TLNQLLVEMDG D+LD AL+RPGR DR IF+ P ++
Sbjct: 415 FSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQ 474
Query: 720 GRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMK 779
R IF+ HLK LK D S +LA LTPGF+GADIAN+CNEAAL AAR+ +I
Sbjct: 475 ERKEIFEQHLKILKLTQPADFYSLRLAELTPGFSGADIANICNEAALHAAREGFKSIDTF 534
Query: 780 HFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-GKG 838
FE A+ERV+AG KK+ +L EE++ VA+HE+GHA+ GW L + + ++KVSI PR
Sbjct: 535 SFEYAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAA 594
Query: 839 LGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVA 898
LG+AQ LPR+Q+L++KEQL +RMCM LGGR SE I F ++TTGA+DDL+KVT+ AY+ V
Sbjct: 595 LGFAQILPRDQFLFTKEQLFERMCMALGGRASEAITFNKVTTGAQDDLRKVTRVAYSMVK 654
Query: 899 HFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKAS 958
+GM + VG VSF + + +P+S+ Q +D E + LI+ AY T+ LL++++
Sbjct: 655 QYGMVDSVGQVSFPDSENQSGIGRRPFSQGLQQQMDLEAKMLIAKAYRHTEKLLLDNRDK 714
Query: 959 VEKVAERLLKKEILDRNDMIELLGTRPFPEK 989
+ +A LL++E+++ ND+ LLG PF K
Sbjct: 715 LILLANALLEREVVNYNDIEALLGPPPFGPK 745
Score = 468 (169.8 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 111/265 (41%), Positives = 151/265 (56%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 477
I+W DF+N +L KG V +++VV + V + L PG + G A + ++D FE
Sbjct: 156 ISWNDFVNEMLAKGEVSRVQVVPESDIVEIYLHPGAVIFGRPRLALMYRMQVANIDKFEE 215
Query: 478 NLELAQAQMHIDPANYLPVIYK-TEIELSSLSXXXXXXXXXXXXXXXXXXXVMEST---- 532
L A+ +++ID + +PV YK T ++L M
Sbjct: 216 KLRAAEEELNIDAKDRIPVTYKRTGFFGNALYALGMAAIGVAILWYIFRLAGMGGRDGGF 275
Query: 533 --------AKLI---NSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 581
AK S GV FKDVAG EAK+E+ EFV++LKNP +Y+ LGAK+PKG
Sbjct: 276 SAFNQLKMAKFTIVDGKSGKGVSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKG 335
Query: 582 AMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCI 641
++L GPPG GKTLLAKA A EA VPF+ ++GSEF+E+ G+G +RVR +F AR APCI
Sbjct: 336 SLLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCI 395
Query: 642 LFIDEIDAVGRKRGGRNFGGHSEQE 666
++IDEIDAVG+KR N G S E
Sbjct: 396 VYIDEIDAVGKKRS-TNMSGFSNTE 419
Score = 241 (89.9 bits), Expect = 1.0e-143, Sum P(2) = 1.0e-143
Identities = 64/185 (34%), Positives = 96/185 (51%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 63
I+W DF+N +L KG V +++VV + V + L PG + G A + ++D FE
Sbjct: 156 ISWNDFVNEMLAKGEVSRVQVVPESDIVEIYLHPGAVIFGRPRLALMYRMQVANIDKFEE 215
Query: 64 NLELAQAQMHIDPANYLPVIYK------TEIELSSLSGI-LPTLLIIGRSAEMMXXXXXX 116
L A+ +++ID + +PV YK + ++ I + L I R A M
Sbjct: 216 KLRAAEEELNIDAKDRIPVTYKRTGFFGNALYALGMAAIGVAILWYIFRLAGM--GGRDG 273
Query: 117 XXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIP 176
M + S GV FKDVAG EAK+E+ EFV++LKNP +Y+ LGAK+P
Sbjct: 274 GFSAFNQLKMAKFTIVDGKSGKGVSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVP 333
Query: 177 KGAML 181
KG++L
Sbjct: 334 KGSLL 338
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 1185 (422.2 bits), Expect = 1.8e-142, Sum P(2) = 1.8e-142
Identities = 228/452 (50%), Positives = 320/452 (70%)
Query: 542 GVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
GV F+DVAG EAK+E+ EFV++LK+P++++ LGAK+PKGA+L GPPG GKTLLAKA A
Sbjct: 305 GVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
EA VPF+ ++G EF+E+ G+G +RVR +F AR APCI++IDEIDAVG+KR G
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
++E+E TLNQLLVEMDG DVLD AL+RPGR DR +F+ P ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
R IF+ HLK LK S++LA LTPGF+GADIAN+CNEAAL AAR+ HT++ +
Sbjct: 485 RREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFN 544
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-GKGL 839
FE A+ERV+AG KK+ +L EE++ VA+HE+GHA+ GW L + + ++KVSI PR L
Sbjct: 545 FEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 604
Query: 840 GYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAH 899
G++Q LPR+QYL++KEQL +RMCM LGGR +E I F R+T+GA+DDL+KVT+ AY+ V
Sbjct: 605 GFSQMLPRDQYLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMVKQ 664
Query: 900 FGMNEKVGNVSFDMPQPGEMVL-EKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKAS 958
FGM +G VSF Q G M + +P+S+ Q++D+E + L++ AY T+ +L+++
Sbjct: 665 FGMAPSIGPVSFPEAQEGLMGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVLLDNLDK 724
Query: 959 VEKVAERLLKKEILDRNDMIELLGTRPF-PEK 989
++ +A LL+KE+++ D+ L+G P P+K
Sbjct: 725 LQALANALLEKEVINYEDIEALIGPPPHGPKK 756
Score = 229 (85.7 bits), Expect = 1.8e-142, Sum P(2) = 1.8e-142
Identities = 59/183 (32%), Positives = 101/183 (55%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 63
I+W DF+N +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWADFVNEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 64 NLELAQAQMHIDPANYLPVIYK-TEIELSSLSGILPT---LLIIGRSAEMMXXXXXXXXX 119
L A+ +++I+ + +PV YK T ++L + T L I+ +
Sbjct: 225 KLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGF 284
Query: 120 XXXXXVMESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 178
+ + +++ + GV F+DVAG EAK+E+ EFV++LK+P++++ LGAK+PKG
Sbjct: 285 SAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKG 344
Query: 179 AML 181
A+L
Sbjct: 345 ALL 347
Score = 119 (46.9 bits), Expect = 7.7e-131, Sum P(2) = 7.7e-131
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 477
I+W DF+N +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWADFVNEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 478 NLELAQAQMHIDPANYLPVIYK 499
L A+ +++I+ + +PV YK
Sbjct: 225 KLRAAEDELNIESKDRIPVSYK 246
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 1182 (421.1 bits), Expect = 6.2e-142, Sum P(2) = 6.2e-142
Identities = 234/474 (49%), Positives = 322/474 (67%)
Query: 542 GVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
GV FKDVAG EAK+E+ EFV++LK+P++++ LGAK+PKGA+L GPPG GKTLLAKA A
Sbjct: 305 GVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
EA VPF+ ++G EF+E+ G+G +RVR +F AR APCI++IDEIDAVG+KR G
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTAVSGF 424
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
++E+E TLNQLLVEMDG D+LD ALLRPGR DR +F+ P ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTLQE 484
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
R IF+ HLK LK S++LA LTPGF+GADIAN+CNEAAL AAR+ HT + +
Sbjct: 485 RKEIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTAVHTSN 544
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-GKGL 839
+ A+ERVVAG KK+ VL EE+K VA+HE+GHA+ GW L + + ++KVSI PR L
Sbjct: 545 LDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSITPRTNAAL 604
Query: 840 GYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAH 899
G+AQ LPR+Q+L+++EQL +RMCM LGGR SE I F R+T+GA+DDL+KVT+ AY+ V
Sbjct: 605 GFAQMLPRDQHLFTREQLFERMCMALGGRASESISFNRVTSGAQDDLRKVTRIAYSMVKQ 664
Query: 900 FGMNEKVGNVSFDMPQPGEMVL-EKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKAS 958
FGM +G VSF Q G + +P+S+ Q+ID+E R L++ AY T+ +L ++
Sbjct: 665 FGMAPSIGPVSFPEAQEGVTGIGRRPFSQGLQQMIDHEARLLVATAYRHTEQVLRDNLDK 724
Query: 959 VEKVAERLLKKEILDRNDMIELLGTRPF-PEKSTYEEFVEGTGSFEEDTSLPEG 1011
+ +A LL+KE+++ D+ L+G P P+K + ++D+ EG
Sbjct: 725 LHALASALLEKEVINYEDIEALIGPPPHGPKKKIAPQKWSDAQREKQDSGEEEG 778
Score = 227 (85.0 bits), Expect = 6.2e-142, Sum P(2) = 6.2e-142
Identities = 59/183 (32%), Positives = 100/183 (54%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 63
I+W DF++ +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 64 NLELAQAQMHIDPANYLPVIYK-TEIELSSLSGILPT---LLIIGRSAEMMXXXXXXXXX 119
L A+ +++I+ + +PV YK T ++L + T L I+ +
Sbjct: 225 KLRAAEDELNIEGKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGF 284
Query: 120 XXXXXVMESTAKLINSS-DIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 178
+ + +++ GV FKDVAG EAK+E+ EFV++LK+P++++ LGAK+PKG
Sbjct: 285 SAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKG 344
Query: 179 AML 181
A+L
Sbjct: 345 ALL 347
Score = 114 (45.2 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 477
I+W DF++ +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 478 NLELAQAQMHIDPANYLPVIYK 499
L A+ +++I+ + +PV YK
Sbjct: 225 KLRAAEDELNIEGKDRIPVSYK 246
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 1178 (419.7 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 228/452 (50%), Positives = 318/452 (70%)
Query: 542 GVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
GV FKDVAG EAK+E+ EFV++LK+P++++ LGAK+PKGA+L GPPG GKTLLAKA A
Sbjct: 305 GVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
EA VPF+ ++G EF+E+ G+G +RVR +F AR APCI++IDEIDAVG+KR G
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
++E+E TLNQLLVEMDG D+LD AL+RPGR DR +F+ P ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQE 484
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
R IF+ HLK LK S++LA LTPGF+GADIAN+CNEAAL AAR+ HT++ +
Sbjct: 485 RREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLN 544
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-GKGL 839
FE A+ERV+AG KK+ +L EE+K VA+HE+GHA+ GW L + + ++KVSI PR L
Sbjct: 545 FEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAAL 604
Query: 840 GYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAH 899
G+AQ LPR+Q+L++KEQL +RMCM LGGR SE + F +T+GA+DDL+KVT+ AY+ V
Sbjct: 605 GFAQMLPRDQHLFTKEQLFERMCMALGGRASEALSFNEVTSGAQDDLRKVTRIAYSMVKQ 664
Query: 900 FGMNEKVGNVSFDMPQPGEMVL-EKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKAS 958
FGM +G +SF Q G M + +P+S+ Q++D+E R L++ AY T+ +L ++
Sbjct: 665 FGMAPGIGPISFPEAQEGLMGIGRRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDK 724
Query: 959 VEKVAERLLKKEILDRNDMIELLGTRPF-PEK 989
++ +A LL+KE+++ D+ L+G P P+K
Sbjct: 725 LQALANALLEKEVINYEDIEALIGPPPHGPKK 756
Score = 229 (85.7 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 59/183 (32%), Positives = 100/183 (54%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 63
I+W DF++ +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 64 NLELAQAQMHIDPANYLPVIYK-TEIELSSLSGILPT---LLIIGRSAEMMXXXXXXXXX 119
L A+ +++I+ + +PV YK T ++L + T L I+ +
Sbjct: 225 KLRAAEDELNIEAKDRIPVSYKRTGFFGNALYSVGMTAVGLAILWYVFRLAGMTGREGGF 284
Query: 120 XXXXXVMESTAKLINSS-DIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 178
+ + +++ GV FKDVAG EAK+E+ EFV++LK+P++++ LGAK+PKG
Sbjct: 285 SAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKG 344
Query: 179 AML 181
A+L
Sbjct: 345 ALL 347
Score = 115 (45.5 bits), Expect = 1.1e-129, Sum P(2) = 1.1e-129
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 477
I+W DF++ +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 478 NLELAQAQMHIDPANYLPVIYK 499
L A+ +++I+ + +PV YK
Sbjct: 225 KLRAAEDELNIEAKDRIPVSYK 246
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 1181 (420.8 bits), Expect = 1.7e-141, Sum P(2) = 1.7e-141
Identities = 229/452 (50%), Positives = 319/452 (70%)
Query: 542 GVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
GV FKDVAG EAK+E+ EFV++LK+P++++ LGAK+PKGA+L GPPG GKTLLAKA A
Sbjct: 305 GVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
EA VPF+ ++G EF+E+ G+G +RVR +F AR APCI++IDEIDAVG+KR G
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
++E+E TLNQLLVEMDG D+LD ALLRPGR DR +F+ P ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRHVFIDLPTLQE 484
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
R IF+ HLK LK S++LA LTPGF+GADIAN+CNEAAL AAR+ HT++ +
Sbjct: 485 RREIFEHHLKSLKLTQASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFN 544
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-GKGL 839
FE A+ERV+AG KK+ +L EE+K VA+HE+GHA+ GW L + + ++KVSI PR L
Sbjct: 545 FEYAVERVIAGTAKKSKILSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 604
Query: 840 GYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAH 899
G+AQ LPR+Q+L++KEQL +RMCM LGGRVSE I F ++T+GA+DDL+KVT+ AY+ V
Sbjct: 605 GFAQMLPRDQHLFTKEQLFERMCMALGGRVSETISFNKVTSGAQDDLRKVTRIAYSMVKQ 664
Query: 900 FGMNEKVGNVSFDMPQPGEMVL-EKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKAS 958
FGM +G +SF Q G + +P+S+ Q++D+E + L++ AY T+ +L ++
Sbjct: 665 FGMAPSIGPISFPEVQEGLTGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVLQDNLDK 724
Query: 959 VEKVAERLLKKEILDRNDMIELLGTRPF-PEK 989
++ +A LL+KE+++ D+ L+G P P+K
Sbjct: 725 LQALANALLEKEVINYEDIEALIGPPPHGPKK 756
Score = 224 (83.9 bits), Expect = 1.7e-141, Sum P(2) = 1.7e-141
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 63
I+W DF++ +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDRFEE 224
Query: 64 NLELAQAQMHIDPANYLPVIYK-TEIELSSLSGILPT---LLIIGRSAEMMXXXXXXXXX 119
L A+ ++I+ + +PV YK T ++L + T L I+ +
Sbjct: 225 KLRAAEDMLNIEGKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGL 284
Query: 120 XXXXXVMESTAKLINSS-DIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 178
+ + +++ GV FKDVAG EAK+E+ EFV++LK+P++++ LGAK+PKG
Sbjct: 285 SAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKG 344
Query: 179 AML 181
A+L
Sbjct: 345 ALL 347
Score = 111 (44.1 bits), Expect = 1.4e-129, Sum P(2) = 1.4e-129
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 477
I+W DF++ +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDRFEE 224
Query: 478 NLELAQAQMHIDPANYLPVIYK 499
L A+ ++I+ + +PV YK
Sbjct: 225 KLRAAEDMLNIEGKDRIPVSYK 246
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 1183 (421.5 bits), Expect = 1.2e-138, Sum P(2) = 1.2e-138
Identities = 237/454 (52%), Positives = 319/454 (70%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
++FKDVAGC EAKVEI EFV++LKNP ++ LGAK+P+GA+LTGPPG GKTLLAKA A E
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAE 341
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG-----GR 657
+ VPFI+++GSEF+E+ G+G SR+R +F AR APCI++IDEIDA+GRKR G
Sbjct: 342 STVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGG 401
Query: 658 NFGGHS-EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAP 716
FGG S E+E TLNQLLVEMDG DVLDKALLRPGRFDR I + P
Sbjct: 402 GFGGGSGEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLP 461
Query: 717 DIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTI 776
+ R +F+++++ +K D + S++LAALTPGFTGADI NVCNE+A+ AA + +
Sbjct: 462 TVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAASNKCHVV 521
Query: 777 VMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR- 835
K E A++RV+AG EK++ L EE++ VAYHEAGHA+ GW L + D LLKV+IIPR
Sbjct: 522 THKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKVTIIPRT 581
Query: 836 GKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYA 895
LG+AQY PR+++L+SK++L DRMCM LGGR +E + FGR T+GA+DDL+KVT+SAYA
Sbjct: 582 SAALGFAQYSPRDKHLFSKDELFDRMCMMLGGRCAENLKFGRATSGAQDDLQKVTKSAYA 641
Query: 896 QVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEH 955
QV +GM+ VG +SF + G + KPYS+ A D E +++ A T L+ +
Sbjct: 642 QVKLYGMSSIVGPLSFPNTE-GFQI--KPYSKKFASTFDQEATLIVAKANEATTDLIKNN 698
Query: 956 KASVEKVAERLLKKEILDRNDMIELLGTRPFPEK 989
+E +A+ LLK+E+L+ D+ +L+GT F +K
Sbjct: 699 MDKLETIAQALLKREVLNYEDVKKLIGTPKFGDK 732
Score = 195 (73.7 bits), Expect = 1.2e-138, Sum P(2) = 1.2e-138
Identities = 55/188 (29%), Positives = 92/188 (48%)
Query: 8 EITWKDFINNVLTKGIVEKLEVVNKKWVRVKLL--PG--NSMDGANFLWFNIG--SVDSF 61
+I+W +FIN +L G V ++ ++ +K V G NS + +G SV F
Sbjct: 137 KISWSEFINELLPTGQVYRIIILPEKDVAYLYCYDTGAKNSRGEKLASMYRVGIPSVARF 196
Query: 62 ERNLELAQAQMHIDPANYLPVIYKTEIELSS------LSGILPTLLIIGRSAE-MMXXXX 114
E + A+A + + P ++ + Y+ ++ L G+L ++ R +
Sbjct: 197 ETEVRAAEAALGLPPEHWTQIEYRRSENVAQWFTIIVLGGLLLGGFVLFRKFKGSFNMSD 256
Query: 115 XXXXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
+ + + ++FKDVAGC EAKVEI EFV++LKNP ++ LGAK
Sbjct: 257 MMSNMTKGKFTIIDPHSVEGKKQLKIKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAK 316
Query: 175 IPKGAMLT 182
+P+GA+LT
Sbjct: 317 LPRGALLT 324
Score = 76 (31.8 bits), Expect = 4.4e-126, Sum P(2) = 4.4e-126
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 399 FMYGLIGSVAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLL--PG 456
F YG++ ++ AA + +I+W +FIN +L G V ++ ++ +K V G
Sbjct: 117 FAYGILFILSPKGAAAV---TADKISWSEFINELLPTGQVYRIIILPEKDVAYLYCYDTG 173
Query: 457 --NSMDGANFLWFNIG--SVDSFERNLELAQAQMHIDPANYLPVIYK 499
NS + +G SV FE + A+A + + P ++ + Y+
Sbjct: 174 AKNSRGEKLASMYRVGIPSVARFETEVRAAEAALGLPPEHWTQIEYR 220
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 1197 (426.4 bits), Expect = 1.3e-137, Sum P(2) = 1.3e-137
Identities = 239/478 (50%), Positives = 325/478 (67%)
Query: 542 GVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
GV F+DVAG EAK E+ EFV++LK+P++Y LGAK+P+GA+L GPPG GKTLLAKA A
Sbjct: 337 GVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVAT 396
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNF-- 659
EA VPF++++GSEF+EM G+G +RVRD+F +K APCI++IDEIDA+GR+R G
Sbjct: 397 EAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMG 456
Query: 660 -GGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDI 718
G E E TLNQLLVEMDG D+LDKALLRPGRFDR I + P +
Sbjct: 457 QGSSGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTL 516
Query: 719 KGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVM 778
R IF+ HL +K + S++LA LTPGF+GADIANVCNEAAL AAR+ +
Sbjct: 517 AERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSS 576
Query: 779 KHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGK- 837
K+ E A+ER+V G EK+++ L E+K +AYHE+GHA+ GW L +D LLKV+I+PR
Sbjct: 577 KNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSL 636
Query: 838 GLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQV 897
LG+AQY P EQ+LYSKE+L D+MCM LGGR +E + F RITTGA++DL+KVT+ AY+Q+
Sbjct: 637 ALGFAQYTPSEQHLYSKEELFDKMCMALGGRAAENLVFNRITTGAQNDLEKVTKIAYSQI 696
Query: 898 AHFGMNEKVGNV---SFDMPQPGEMVL---EKPYSESTAQLIDNEVRSLISNAYTRTKAL 951
FGMN+ +G + D + G + +KP+S + +IDNE R ++++AY T+ +
Sbjct: 697 KKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGI 756
Query: 952 LIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFP-EKSTYE--EFVEGTGSFEEDT 1006
L H+ +EK+AE LL+KE LD + +++L+G P+ K E EF + + DT
Sbjct: 757 LTTHRDKLEKLAEALLEKETLDYDQVVQLIGPPPYDLGKRQVESVEFEQSLKNLSTDT 814
Score = 171 (65.3 bits), Expect = 1.3e-137, Sum P(2) = 1.3e-137
Identities = 49/187 (26%), Positives = 93/187 (49%)
Query: 3 EMNYKEITWKDFINNVLTKGIVEKLEV-VNKKWVRVKLLPGNSMDG----ANFLWFNIGS 57
E + + ++W +F++++L G V++L + + + V + L G + G + +
Sbjct: 195 EGSTRYVSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIKGRKVSSTIFHMAVAD 254
Query: 58 VDSFERNLELAQAQMHIDPANYLPVIYKTEIELSS-LSGILPTLLIIGRSAEMMXXXXXX 116
+ FE L + ++ I +PV Y + + + + +L ++ A M
Sbjct: 255 ANKFEEKLRDVEKRLGIKDG--VPVTYDRQTDTTGRILMLLLVCALLMSIATRMKSIKSP 312
Query: 117 XXXXXXXXVMESTAKLINSSD--IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAK 174
+ + L++ D GV F+DVAG EAK E+ EFV++LK+P++Y LGAK
Sbjct: 313 LSMDSFNQMGRAKFTLVDPFDGGRGVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAK 372
Query: 175 IPKGAML 181
+P+GA+L
Sbjct: 373 VPRGALL 379
Score = 57 (25.1 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 22/110 (20%), Positives = 53/110 (48%)
Query: 399 FMYGLIGSVAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEV-VNKKWVRVKLLPGN 457
+M+ S+ + + E + + ++W +F++++L G V++L + + + V + L G
Sbjct: 177 YMFVAFFSLLITPRSERPEGSTRYVSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGA 236
Query: 458 SMDG--ANFLWFNIGSVDS--FERNLELAQAQMHIDPANYLPVIYKTEIE 503
+ G + F++ D+ FE L + ++ I +PV Y + +
Sbjct: 237 VIKGRKVSSTIFHMAVADANKFEEKLRDVEKRLGIKDG--VPVTYDRQTD 284
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 1130 (402.8 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 235/460 (51%), Positives = 310/460 (67%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AKL V F DVAG +E K E+ E V FLKNP++Y +LGA+IPKG +L G PG
Sbjct: 142 KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPG 201
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K+APCI+FIDEIDA
Sbjct: 202 TGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDA 261
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQLLVEMDGF D+LD ALLRPGRFDR
Sbjct: 262 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDR 321
Query: 710 QIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
I V PDI GR I KVH+K PL D+D D L+R+ TPGFTGAD+AN+ NEAAL+
Sbjct: 322 HIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARR----TPGFTGADLANMVNEAALL 377
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR I M+ E+AIERV+AG EKK+ V+ EK+ VAYHEAGHA+ G+ L + DP+
Sbjct: 378 AARRNKKVINMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPV 437
Query: 828 LKVSIIPRGKGLGYAQYLPREQYLY-SKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDL 886
K+SIIPRG+ GY LP E Y +K QLLD + M LGGRV+E + I+TGA +DL
Sbjct: 438 HKISIIPRGRAGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLEDISTGARNDL 497
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPG-----EMVLEKPYSESTAQLIDNEVRSLI 941
++ T++A V +GM+E++G ++F ++ ++ YSE A ID EVR +I
Sbjct: 498 ERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKII 557
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
+ Y+R + +L ++ + VA +L++ E ++ + +L+
Sbjct: 558 DSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLM 597
Score = 156 (60.0 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 52/177 (29%), Positives = 83/177 (46%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFE--RN 64
+++ + +F + +L KG V + + + + + G DG F G ++ E ++
Sbjct: 33 RDLKYDEFYS-LLEKGQVASVAIQTDRTINE--ISGVLRDGTRFK--TRGPLEDAELYKD 87
Query: 65 LELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXXXXXXX 124
L+ + I P P + + LS +LP LL++G M
Sbjct: 88 LKKMNVTVEIMPPKE-PAFWA-----NLLSSLLPVLLMVGLFFFFMQQAQGGGNRVMSFG 141
Query: 125 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AKL V F DVAG +E K E+ E V FLKNP++Y +LGA+IPKG +L
Sbjct: 142 --KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLL 196
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 1130 (402.8 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 235/460 (51%), Positives = 310/460 (67%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AKL V F DVAG +E K E+ E V FLKNP++Y +LGA+IPKG +L G PG
Sbjct: 142 KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPG 201
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K+APCI+FIDEIDA
Sbjct: 202 TGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDA 261
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQLLVEMDGF D+LD ALLRPGRFDR
Sbjct: 262 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDR 321
Query: 710 QIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
I V PDI GR I KVH+K PL D+D D L+R+ TPGFTGAD+AN+ NEAAL+
Sbjct: 322 HIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARR----TPGFTGADLANMVNEAALL 377
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR I M+ E+AIERV+AG EKK+ V+ EK+ VAYHEAGHA+ G+ L + DP+
Sbjct: 378 AARRNKKVINMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPV 437
Query: 828 LKVSIIPRGKGLGYAQYLPREQYLY-SKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDL 886
K+SIIPRG+ GY LP E Y +K QLLD + M LGGRV+E + I+TGA +DL
Sbjct: 438 HKISIIPRGRAGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLEDISTGARNDL 497
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPG-----EMVLEKPYSESTAQLIDNEVRSLI 941
++ T++A V +GM+E++G ++F ++ ++ YSE A ID EVR +I
Sbjct: 498 ERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKII 557
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
+ Y+R + +L ++ + VA +L++ E ++ + +L+
Sbjct: 558 DSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLM 597
Score = 156 (60.0 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 52/177 (29%), Positives = 83/177 (46%)
Query: 7 KEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFE--RN 64
+++ + +F + +L KG V + + + + + G DG F G ++ E ++
Sbjct: 33 RDLKYDEFYS-LLEKGQVASVAIQTDRTINE--ISGVLRDGTRFK--TRGPLEDAELYKD 87
Query: 65 LELAQAQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXXXXXXX 124
L+ + I P P + + LS +LP LL++G M
Sbjct: 88 LKKMNVTVEIMPPKE-PAFWA-----NLLSSLLPVLLMVGLFFFFMQQAQGGGNRVMSFG 141
Query: 125 VMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AKL V F DVAG +E K E+ E V FLKNP++Y +LGA+IPKG +L
Sbjct: 142 --KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLL 196
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1032 (368.3 bits), Expect = 2.0e-117, Sum P(2) = 2.0e-117
Identities = 225/487 (46%), Positives = 306/487 (62%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AK++ V F DVAG +EAK E+ E V FL+NPQ++ LG KIPKGA+L GPPG
Sbjct: 140 KSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPG 199
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEA VPF T+SGS+F+EMFVGVG SRVRDMF A+K+APCI+FIDEIDA
Sbjct: 200 TGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDA 259
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR RG GG+ E+E TLNQLLVEMDGF DVLD ALLRPGRFDR
Sbjct: 260 VGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDR 319
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIA 768
+ V PDIKGR I VH + KT L D DL R +A TPGF+GAD+AN+ NEAAL+A
Sbjct: 320 NVTVGNPDIKGREKILGVHAR--KTPLGPDVDL-RIIARGTPGFSGADLANLVNEAALMA 376
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
AR + M+ FE A ++V+ G E+++ VL ++K+ AYHEAGHAV G L DP+
Sbjct: 377 ARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDPVY 436
Query: 829 KVSIIPRGKGLGYAQYLPREQYL-YSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDD 885
K +IIPRG LG LP L + +++ ++ MT+ G+ +E + +G ++ G D
Sbjct: 437 KATIIPRGGALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGPAGD 496
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSES--TAQLIDNEVRSLISN 943
+++ +Q A A V +GM++KVGN+ + G +S S T +LI+ EV+ I
Sbjct: 497 IQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKRFIQQ 556
Query: 944 AYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFE 1003
Y + A+L E + +++A+ LL+ E L ++ ++ P P E+ G+
Sbjct: 557 GYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMKGEP-PHAGDDEDQGTDQGNAA 615
Query: 1004 EDTSLPE 1010
T++P+
Sbjct: 616 SVTAIPK 622
Score = 145 (56.1 bits), Expect = 2.0e-117, Sum P(2) = 2.0e-117
Identities = 36/86 (41%), Positives = 47/86 (54%)
Query: 96 ILPTLLIIGRSAEMMXXXXXXXXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEI 155
+LP LL+IG M +S AK++ V F DVAG +EAK E+
Sbjct: 110 LLPFLLLIGVWVYFMNRMQGGGRGGAMGFG-KSKAKMLTEKHGRVTFDDVAGIDEAKEEL 168
Query: 156 MEFVNFLKNPQQYIDLGAKIPKGAML 181
E V FL+NPQ++ LG KIPKGA+L
Sbjct: 169 EEIVEFLRNPQKFSRLGGKIPKGALL 194
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1032 (368.3 bits), Expect = 2.0e-117, Sum P(2) = 2.0e-117
Identities = 225/487 (46%), Positives = 306/487 (62%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AK++ V F DVAG +EAK E+ E V FL+NPQ++ LG KIPKGA+L GPPG
Sbjct: 140 KSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPG 199
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEA VPF T+SGS+F+EMFVGVG SRVRDMF A+K+APCI+FIDEIDA
Sbjct: 200 TGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDA 259
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR RG GG+ E+E TLNQLLVEMDGF DVLD ALLRPGRFDR
Sbjct: 260 VGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDR 319
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIA 768
+ V PDIKGR I VH + KT L D DL R +A TPGF+GAD+AN+ NEAAL+A
Sbjct: 320 NVTVGNPDIKGREKILGVHAR--KTPLGPDVDL-RIIARGTPGFSGADLANLVNEAALMA 376
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
AR + M+ FE A ++V+ G E+++ VL ++K+ AYHEAGHAV G L DP+
Sbjct: 377 ARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDPVY 436
Query: 829 KVSIIPRGKGLGYAQYLPREQYL-YSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDD 885
K +IIPRG LG LP L + +++ ++ MT+ G+ +E + +G ++ G D
Sbjct: 437 KATIIPRGGALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGPAGD 496
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSES--TAQLIDNEVRSLISN 943
+++ +Q A A V +GM++KVGN+ + G +S S T +LI+ EV+ I
Sbjct: 497 IQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKRFIQQ 556
Query: 944 AYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFE 1003
Y + A+L E + +++A+ LL+ E L ++ ++ P P E+ G+
Sbjct: 557 GYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMKGEP-PHAGDDEDQGTDQGNAA 615
Query: 1004 EDTSLPE 1010
T++P+
Sbjct: 616 SVTAIPK 622
Score = 145 (56.1 bits), Expect = 2.0e-117, Sum P(2) = 2.0e-117
Identities = 36/86 (41%), Positives = 47/86 (54%)
Query: 96 ILPTLLIIGRSAEMMXXXXXXXXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEI 155
+LP LL+IG M +S AK++ V F DVAG +EAK E+
Sbjct: 110 LLPFLLLIGVWVYFMNRMQGGGRGGAMGFG-KSKAKMLTEKHGRVTFDDVAGIDEAKEEL 168
Query: 156 MEFVNFLKNPQQYIDLGAKIPKGAML 181
E V FL+NPQ++ LG KIPKGA+L
Sbjct: 169 EEIVEFLRNPQKFSRLGGKIPKGALL 194
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 597 (215.2 bits), Expect = 2.1e-116, Sum P(3) = 2.1e-116
Identities = 136/345 (39%), Positives = 199/345 (57%)
Query: 469 IGSVDSFERNLELAQAQMHIDPANYLPVIYK--------------TEIELSSLSXXXXXX 514
+ ++D FE L A+ +++I+ + +PV YK T + L+ L
Sbjct: 216 VANIDKFEEKLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLA 275
Query: 515 XXXXXXXXXXXXXVMESTAKLI--NSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYI 572
++ I + GV F+DVAG EAK+E+ EFV++LK+P++++
Sbjct: 276 GMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFL 335
Query: 573 DLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFS 632
LGAK+PKGA+L GPPG GKTLLAKA A EA VPF+ ++G EF+E+ G+G +RVR +F
Sbjct: 336 QLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFK 395
Query: 633 MARKHAPCILFIDEIDAVGRKRGGRNFG-GHSEQENTLNQLLVEMDGFXXXXXXXXXXXX 691
AR APCI++IDEIDAVG+KR G ++E+E TLNQLLVEMDG
Sbjct: 396 EARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLAST 455
Query: 692 XXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPG 751
DVLD AL+RPGR DR +F+ P ++ R IF+ HLK LK S++LA LTPG
Sbjct: 456 NRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPG 515
Query: 752 FTG-ADIANVCN--EAALIAARDL-HTTI--VMKHFEQAIERVVA 790
F+G A + + + E ++A + H + +++H E ++ +A
Sbjct: 516 FSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIA 560
Score = 479 (173.7 bits), Expect = 2.1e-116, Sum P(3) = 2.1e-116
Identities = 90/203 (44%), Positives = 141/203 (69%)
Query: 790 AGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-GKGLGYAQYLPRE 848
+G KK+ +L EE++ VA+HE+GHA+ GW L + + ++KVSI PR LG++Q LPR+
Sbjct: 517 SGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRD 576
Query: 849 QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGN 908
QYL++KEQL +RMCM LGGR +E I F R+T+GA+DDL+KVT+ AY+ V FGM +G
Sbjct: 577 QYLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGP 636
Query: 909 VSFDMPQPGEMVL-EKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLL 967
VSF Q G + + +P+S+ Q++D+E R L++ AY T+ +L+++ ++ +A LL
Sbjct: 637 VSFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALL 696
Query: 968 KKEILDRNDMIELLGTRPF-PEK 989
+KE+++ D+ L+G P P+K
Sbjct: 697 EKEVINYEDIEALIGPPPHGPKK 719
Score = 229 (85.7 bits), Expect = 3.0e-62, Sum P(2) = 3.0e-62
Identities = 59/183 (32%), Positives = 101/183 (55%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 63
I+W DF+N +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWADFVNEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 64 NLELAQAQMHIDPANYLPVIYK-TEIELSSLSGILPT---LLIIGRSAEMMXXXXXXXXX 119
L A+ +++I+ + +PV YK T ++L + T L I+ +
Sbjct: 225 KLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGF 284
Query: 120 XXXXXVMESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 178
+ + +++ + GV F+DVAG EAK+E+ EFV++LK+P++++ LGAK+PKG
Sbjct: 285 SAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKG 344
Query: 179 AML 181
A+L
Sbjct: 345 ALL 347
Score = 119 (46.9 bits), Expect = 2.1e-116, Sum P(3) = 2.1e-116
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 477
I+W DF+N +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWADFVNEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 478 NLELAQAQMHIDPANYLPVIYK 499
L A+ +++I+ + +PV YK
Sbjct: 225 KLRAAEDELNIESKDRIPVSYK 246
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 597 (215.2 bits), Expect = 2.1e-116, Sum P(3) = 2.1e-116
Identities = 136/345 (39%), Positives = 199/345 (57%)
Query: 469 IGSVDSFERNLELAQAQMHIDPANYLPVIYK--------------TEIELSSLSXXXXXX 514
+ ++D FE L A+ +++I+ + +PV YK T + L+ L
Sbjct: 216 VANIDKFEEKLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLA 275
Query: 515 XXXXXXXXXXXXXVMESTAKLI--NSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYI 572
++ I + GV F+DVAG EAK+E+ EFV++LK+P++++
Sbjct: 276 GMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFL 335
Query: 573 DLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFS 632
LGAK+PKGA+L GPPG GKTLLAKA A EA VPF+ ++G EF+E+ G+G +RVR +F
Sbjct: 336 QLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFK 395
Query: 633 MARKHAPCILFIDEIDAVGRKRGGRNFG-GHSEQENTLNQLLVEMDGFXXXXXXXXXXXX 691
AR APCI++IDEIDAVG+KR G ++E+E TLNQLLVEMDG
Sbjct: 396 EARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLAST 455
Query: 692 XXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPG 751
DVLD AL+RPGR DR +F+ P ++ R IF+ HLK LK S++LA LTPG
Sbjct: 456 NRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPG 515
Query: 752 FTG-ADIANVCN--EAALIAARDL-HTTI--VMKHFEQAIERVVA 790
F+G A + + + E ++A + H + +++H E ++ +A
Sbjct: 516 FSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIA 560
Score = 479 (173.7 bits), Expect = 2.1e-116, Sum P(3) = 2.1e-116
Identities = 90/203 (44%), Positives = 141/203 (69%)
Query: 790 AGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-GKGLGYAQYLPRE 848
+G KK+ +L EE++ VA+HE+GHA+ GW L + + ++KVSI PR LG++Q LPR+
Sbjct: 517 SGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRD 576
Query: 849 QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGN 908
QYL++KEQL +RMCM LGGR +E I F R+T+GA+DDL+KVT+ AY+ V FGM +G
Sbjct: 577 QYLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGP 636
Query: 909 VSFDMPQPGEMVL-EKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLL 967
VSF Q G + + +P+S+ Q++D+E R L++ AY T+ +L+++ ++ +A LL
Sbjct: 637 VSFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALL 696
Query: 968 KKEILDRNDMIELLGTRPF-PEK 989
+KE+++ D+ L+G P P+K
Sbjct: 697 EKEVINYEDIEALIGPPPHGPKK 719
Score = 229 (85.7 bits), Expect = 3.0e-62, Sum P(2) = 3.0e-62
Identities = 59/183 (32%), Positives = 101/183 (55%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 63
I+W DF+N +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWADFVNEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 64 NLELAQAQMHIDPANYLPVIYK-TEIELSSLSGILPT---LLIIGRSAEMMXXXXXXXXX 119
L A+ +++I+ + +PV YK T ++L + T L I+ +
Sbjct: 225 KLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGF 284
Query: 120 XXXXXVMESTAKLINS-SDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 178
+ + +++ + GV F+DVAG EAK+E+ EFV++LK+P++++ LGAK+PKG
Sbjct: 285 SAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKG 344
Query: 179 AML 181
A+L
Sbjct: 345 ALL 347
Score = 119 (46.9 bits), Expect = 2.1e-116, Sum P(3) = 2.1e-116
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKK-WVRVKLLPGNSMDG----ANFLWFNIGSVDSFER 477
I+W DF+N +L KG V++++VV + V V L PG + G A + ++D FE
Sbjct: 165 ISWADFVNEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 478 NLELAQAQMHIDPANYLPVIYK 499
L A+ +++I+ + +PV YK
Sbjct: 225 KLRAAEDELNIESKDRIPVSYK 246
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 1138 (405.7 bits), Expect = 1.9e-115, P = 1.9e-115
Identities = 232/468 (49%), Positives = 310/468 (66%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AKL V+FKDVAG +E K E++E V FLK+P+++ +LGA+IPKG +L GPPG
Sbjct: 145 KSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPG 204
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K+APC++FIDEIDA
Sbjct: 205 TGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDA 264
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQLLVEMDGF D+LD ALLRPGRFDR
Sbjct: 265 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDR 324
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAA 769
QI V PD+ GR ++ KVH + LD + +A TPGF+GAD+ N+ NEAAL+AA
Sbjct: 325 QITVDRPDVIGREAVLKVHAR--NKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAA 382
Query: 770 RDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLK 829
R I + ++A +RV+AG KK+ V+ +E+ VAYHE GH V G L AD + K
Sbjct: 383 RQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHK 442
Query: 830 VSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKK 888
V+I+PRG+ GYA LPRE +Y +K +LLD++ LGGRV+EEI FG ++TGA +D ++
Sbjct: 443 VTIVPRGQAGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGEVSTGAHNDFQR 502
Query: 889 VTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVRSLIS 942
T A V FGM+EK+G + F Q G++ L E+ YS+ A ID E++ +I
Sbjct: 503 ATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRIIK 562
Query: 943 NAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKS 990
Y R K +L E++ +E +A+ LLK E LD + L+ PE++
Sbjct: 563 ECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHGTLPERN 610
Score = 145 (56.1 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AKL V+FKDVAG +E K E++E V FLK+P+++ +LGA+IPKG +L
Sbjct: 145 KSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLL 199
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
Identities = 232/473 (49%), Positives = 320/473 (67%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AKL+ + V F+DVAG +EAK E+ E + FLK+P+++ LG +IPKG +L GPPG
Sbjct: 137 KSRAKLLTEAQGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPG 196
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEA VPF ++SGS+F+EMFVGVG SRVRD+F +K+APCI+FIDEIDA
Sbjct: 197 TGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDA 256
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR RG GGH E+E TLNQLLVEMDGF DVLD ALLRPGRFDR
Sbjct: 257 VGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDR 316
Query: 710 QIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
Q+ VP PD+KGR I KVH K PL +D+D ++R TPGF+GAD++NV NEAAL+
Sbjct: 317 QVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARG----TPGFSGADLSNVVNEAALL 372
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR + + MK F+ A ++V+ G+E+++ V+ EEKK AYHEAGH + + DP+
Sbjct: 373 AARKDKSFVEMKDFDDAKDKVLMGVERRSMVISEEEKKNTAYHEAGHTLVAKLIPGTDPV 432
Query: 828 LKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDL 886
KVSIIPRG+ LG LP E ++ Y+KE LL+R+ + +GGR +EEI F +TTGA +D+
Sbjct: 433 HKVSIIPRGRALGVTMQLPIEDKHSYNKESLLNRIAVLMGGRAAEEIIFNELTTGAGNDI 492
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPG-----EMVLEKPYSESTAQLIDNEVRSLI 941
++ T+ A V +GM+EK+G V+F + +M + K YSE+TA ID E+R +I
Sbjct: 493 ERATEIARKMVCEWGMSEKMGPVTFGKKEESIFLGRDMSMHKNYSEATAVEIDEEIRKII 552
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEE 994
+Y+R K LL E+ + + +A +L++KE L +++ ++ ++ EE
Sbjct: 553 DGSYSRVKQLLNENLSVLHCLATQLIEKENLTGDEVDRIIKDDCAASRAAVEE 605
Score = 136 (52.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AKL+ + V F+DVAG +EAK E+ E + FLK+P+++ LG +IPKG +L
Sbjct: 137 KSRAKLLTEAQGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLL 191
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 253/595 (42%), Positives = 359/595 (60%)
Query: 423 ITWKDFINNVLTKGIVEKLEVVNKKWV-RVKLLPGNSMDGANFLWFNIGSVDSFERNLEL 481
+++ FI L KG V +++ K V VK NS G F+ + + + ++ +
Sbjct: 35 VSYDKFITK-LEKGEVRNVQLQPKNGVFEVKGQFNNSSQGEQFVTYAPNTEELQKKINDK 93
Query: 482 AQ-AQMHIDPANYLP--VIYKTEI-ELSSLSXXXXXXXXXXXXXXXXXXXVMESTAKLIN 537
AQ A++ PA V + T I + +S AKL N
Sbjct: 94 AQGAEVKYQPAEETSAWVTFFTSIIPFVIIFILFFFLLNQAQGGGSRVMNFGKSKAKLYN 153
Query: 538 SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAK 597
VRF+DVAG +E K E++E V FLK+P+++ ++GA+IPKG +L GPPGTGKTLLA+
Sbjct: 154 DEKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLAR 213
Query: 598 ATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR 657
A AGEA VPF ++SGS+F+EMFVGVG SRVRD+F A+K+APCI+FIDEIDAVGR+RG
Sbjct: 214 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAG 273
Query: 658 NFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPD 717
GGH E+E TLNQLLVEMDGF D+LD ALLRPGRFDRQI V PD
Sbjct: 274 LGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPD 333
Query: 718 IKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIV 777
+ GR ++ KVH + LD + R +A TPGF+GAD+ N+ NEAAL+AAR I
Sbjct: 334 VNGREAVLKVHAR--NKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKID 391
Query: 778 MKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGK 837
M ++A +RV+AG KK+ V+ +E+ VA+HEAGH V G L AD + KV+I+PRG+
Sbjct: 392 MSDIDEATDRVIAGPAKKSRVISEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIVPRGQ 451
Query: 838 GLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQ 896
GYA LP+E +Y +K +LLD++ LGGRV+EEI FG ++TGA +D ++ T A
Sbjct: 452 AGGYAVMLPKEDRYFMTKPELLDKITGLLGGRVAEEIVFGEVSTGAHNDFQRATGIARRM 511
Query: 897 VAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVRSLISNAYTRTKA 950
V FGM++K+G + F Q G++ L E+ YS++ A ID E+++++ Y R K
Sbjct: 512 VTEFGMSDKLGPMQFGSSQGGQVFLGRDFHSEQNYSDAIAHEIDMEMQTIMKECYARAKQ 571
Query: 951 LLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSFEED 1005
+L +++ ++ +A+ LL+ E LD + L PE+ T V+ + ++D
Sbjct: 572 ILTDNRDKLDLIAKTLLEVETLDAEQINHLCDYGRLPERPTSSADVKVNINMKKD 626
Score = 163 (62.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 9 ITWKDFINNVLTKGIVEKLEVVNKKWV-RVKLLPGNSMDGANFLWFNIGSVDSFERNLEL 67
+++ FI L KG V +++ K V VK NS G F+ + + + ++ +
Sbjct: 35 VSYDKFITK-LEKGEVRNVQLQPKNGVFEVKGQFNNSSQGEQFVTYAPNTEELQKKINDK 93
Query: 68 AQ-AQMHIDPANYLPVIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXXXXXXXVM 126
AQ A++ PA +T ++ + I+P ++I ++ VM
Sbjct: 94 AQGAEVKYQPAE------ETSAWVTFFTSIIPFVIIF-----ILFFFLLNQAQGGGSRVM 142
Query: 127 ---ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AKL N VRF+DVAG +E K E++E V FLK+P+++ ++GA+IPKG +L
Sbjct: 143 NFGKSKAKLYNDEKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLL 200
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
Identities = 234/490 (47%), Positives = 317/490 (64%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S A+L++ + V F DVAG +EAK E+ E V FL++P ++ LG K+P G +L GPPGT
Sbjct: 141 SKARLLSQDQVKVTFDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLLVGPPGT 200
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTLLAKA AGEA VPF T+SGS+F+EMFVGVG SRVRDMF A+K APCI+FIDEIDAV
Sbjct: 201 GKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAV 260
Query: 651 GRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQ 710
GR RG GGH E+E TLNQLLVEMDGF DVLD ALLRPGRFDRQ
Sbjct: 261 GRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQ 320
Query: 711 IFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
+ VP PDIKGR I KVH+ K L +D + +A TPGF+GAD+AN+ NEAAL AAR
Sbjct: 321 VVVPLPDIKGREYILKVHMN--KLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAAR 378
Query: 771 DLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKV 830
+ + M FE+A ++++ G E+++ V+ +EKK AYHEAGHA+ G + DP+ KV
Sbjct: 379 ENKKDVSMSEFERAKDKIMMGAERRSMVMSDDEKKLTAYHEAGHAIVGLHMLEHDPVYKV 438
Query: 831 SIIPRGKGLGYAQYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDDLK 887
+IIPRG+ LG +LP ++Y +K +L ++ GGR++EEI FG +TTGA +D++
Sbjct: 439 TIIPRGRALGVTMFLPEHDRYSMTKRRLECQLAGLFGGRIAEEIIFGPDLVTTGASNDIE 498
Query: 888 KVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVRSLI 941
K T+ A V +G+++K+G +++ + GE+ L K S++T + ID+EVR ++
Sbjct: 499 KATEIARNMVTKWGLSQKLGPLTY-REEEGEVFLGRSVTQRKDISDATNKEIDSEVRRIV 557
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL-GTRPFPEKSTYEEFVEGTG 1000
AYT K L EH + +A+ L+K E + + E+L G P P EE G+
Sbjct: 558 DTAYTTAKQTLEEHIEQLHLMAKALIKYETIGEAQIKEILAGKEPSPPPDWKEE--NGSA 615
Query: 1001 SFEEDTSLPE 1010
S ++ S E
Sbjct: 616 SAHKENSEKE 625
Score = 123 (48.4 bits), Expect = 0.00073, P = 0.00073
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 128 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
S A+L++ + V F DVAG +EAK E+ E V FL++P ++ LG K+P G +L
Sbjct: 141 SKARLLSQDQVKVTFDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLL 194
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 224/463 (48%), Positives = 301/463 (65%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S +K + GV F DVAG ++AK+E+ E V+FLKNP +Y LGAKIPKG +L GPPGT
Sbjct: 247 SKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGT 306
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTLLA+A AGEA VPF + + SEF+E+FVGVG SRVRD+F A+ APCI+FIDEIDAV
Sbjct: 307 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 366
Query: 651 GRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQ 710
GR+RG GG+ E+E T+NQLL EMDGF DVLD ALLRPGRFDRQ
Sbjct: 367 GRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 426
Query: 711 IFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIA 768
+ V PD+ GR I +VH K L D+D D ++R+ TPGFTGAD+ N+ NEAA++A
Sbjct: 427 VTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARR----TPGFTGADLQNLMNEAAILA 482
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
AR I A+ER++AG EKK V+ E+K+ VAYHEAGHA+ G + DP+
Sbjct: 483 ARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVA 542
Query: 829 KVSIIPRGKGLGYAQYLPREQYL----YSKEQLLDRMCMTLGGRVSEEIFFG--RITTGA 882
K+SIIPRG+ G + P E+ L YS+ L ++M + LGGRV+EE+ FG +TTGA
Sbjct: 543 KISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGA 602
Query: 883 EDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMP--QP--GE-MVLEKPYSESTAQLIDNEV 937
+D +V++ A + FG ++K+G V+ P P G+ M +K YS +TA ++D EV
Sbjct: 603 SNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEV 662
Query: 938 RSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIEL 980
R L+ AY R ++ H + K+A+ L++KE +D + + L
Sbjct: 663 RELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSL 705
Score = 148 (57.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 128 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
S +K + GV F DVAG ++AK+E+ E V+FLKNP +Y LGAKIPKG +L
Sbjct: 247 SKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLL 300
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 609 TVSGSEFLEMFV 620
TV G EF+ +F+
Sbjct: 696 TVDGEEFMSLFI 707
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 216/467 (46%), Positives = 310/467 (66%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A++++ I F DVAGC+EAK ++ E V++L++P ++ LG KIP G ++ GPPG
Sbjct: 140 KSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPG 199
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF T+SGS+F+EMFVGVG SRVRDMF A+K +PCI+FIDEIDA
Sbjct: 200 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDA 259
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQ+LVEMDGF DVLD ALLRPGRFDR
Sbjct: 260 VGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 319
Query: 710 QIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
Q+ V PD++GR I KVH++ PL D++ ++R TPGF+GAD+AN+ NEAAL
Sbjct: 320 QVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARG----TPGFSGADLANLVNEAALF 375
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR + M FE A ++++ G E+++ V+ E K++ AYHEAGHAV G + DP+
Sbjct: 376 AARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPV 435
Query: 828 LKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTL-GGRVSEEIFFGR--ITTGAED 884
KVSIIPRG+ LG YLP + + +Q L+ M +L GGR++EE+ +G+ ++TGA +
Sbjct: 436 YKVSIIPRGRALGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASN 495
Query: 885 DLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVR 938
D+++ T+ A V +G +EK+G + + + GE+ L K S+ TA+LID+EVR
Sbjct: 496 DIERATEIARKMVTQWGFSEKLGPMLYAEDE-GEVFLGRSVTQTKHMSDDTAKLIDDEVR 554
Query: 939 SLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRP 985
+I Y R + +++++ + + + L+K E +D + +L+ +P
Sbjct: 555 QIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMARKP 601
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S A++++ I F DVAGC+EAK ++ E V++L++P ++ LG KIP G ++
Sbjct: 140 KSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLM 194
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 216/467 (46%), Positives = 310/467 (66%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A++++ I F DVAGC+EAK ++ E V++L++P ++ LG KIP G ++ GPPG
Sbjct: 140 KSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPG 199
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF T+SGS+F+EMFVGVG SRVRDMF A+K +PCI+FIDEIDA
Sbjct: 200 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDA 259
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQ+LVEMDGF DVLD ALLRPGRFDR
Sbjct: 260 VGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 319
Query: 710 QIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
Q+ V PD++GR I KVH++ PL D++ ++R TPGF+GAD+AN+ NEAAL
Sbjct: 320 QVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARG----TPGFSGADLANLVNEAALF 375
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR + M FE A ++++ G E+++ V+ E K++ AYHEAGHAV G + DP+
Sbjct: 376 AARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPV 435
Query: 828 LKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTL-GGRVSEEIFFGR--ITTGAED 884
KVSIIPRG+ LG YLP + + +Q L+ M +L GGR++EE+ +G+ ++TGA +
Sbjct: 436 YKVSIIPRGRALGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASN 495
Query: 885 DLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVR 938
D+++ T+ A V +G +EK+G + + + GE+ L K S+ TA+LID+EVR
Sbjct: 496 DIERATEIARKMVTQWGFSEKLGPMLYAEDE-GEVFLGRSVTQTKHMSDDTAKLIDDEVR 554
Query: 939 SLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRP 985
+I Y R + +++++ + + + L+K E +D + +L+ +P
Sbjct: 555 QIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMARKP 601
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S A++++ I F DVAGC+EAK ++ E V++L++P ++ LG KIP G ++
Sbjct: 140 KSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLM 194
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
Identities = 224/492 (45%), Positives = 311/492 (63%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A+++ I F DVAGC+EAK E+ E V +L+ P ++ LG KIPKG ++ GPPG
Sbjct: 136 KSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPG 195
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF T+SGS+F+EMFVGVG SRVRDMF A+K APCI+FIDEIDA
Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA 255
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQ+LVEMDGF DVLD ALLRPGRFDR
Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
Query: 710 QIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
Q+ V PD++GR I KVH++ PL D+D ++R TPGF+GAD+AN+ NEAAL
Sbjct: 316 QVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARG----TPGFSGADLANLVNEAALF 371
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR + M FE+A ++++ G E+++ V+ +K++ AYHEAGHA+ G + DP+
Sbjct: 372 AARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPV 431
Query: 828 LKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTL-GGRVSEEIFFG--RITTGAED 884
KV+IIPRG+ LG +LP + + Q L+ TL GGR++EEI +G ++TGA +
Sbjct: 432 HKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASN 491
Query: 885 DLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVR 938
D+K T A V +G +EK+G + + + GE+ L K S+ TA++ID EV+
Sbjct: 492 DIKVATNLARNMVTQWGFSEKLGPLLY-AEEEGEVFLGRSVAKAKHMSDETARIIDQEVK 550
Query: 939 SLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEG 998
+LI Y R + LL ++ + + + L+K E +D + +L+ R + +EE G
Sbjct: 551 ALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEE--PG 608
Query: 999 TGSFEEDTSLPE 1010
+ D P+
Sbjct: 609 ASNNSGDNGSPK 620
Score = 136 (52.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S A+++ I F DVAGC+EAK E+ E V +L+ P ++ LG KIPKG ++
Sbjct: 136 KSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLM 190
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 223/463 (48%), Positives = 300/463 (64%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S +K + GV F DVAG ++AK+E+ E V+FLKNP +Y LGAKIPKG +L GPPGT
Sbjct: 235 SKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGT 294
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTLLA+A AGEA VPF + + SEF+E+FVGVG SRVRD+F A+ APCI+FIDEIDAV
Sbjct: 295 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 354
Query: 651 GRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQ 710
GR+RG GG+ E+E T+NQLL EMDGF DVLD ALLRPGRFDRQ
Sbjct: 355 GRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 414
Query: 711 IFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIA 768
+ V PD+ GR I KVH K + D+D + ++R+ TPGFTGAD+ N+ NEAA++A
Sbjct: 415 VTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARR----TPGFTGADLQNLMNEAAILA 470
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
AR I A+ER++AG EKK V+ E+K+ VAYHEAGHA+ G + DP+
Sbjct: 471 ARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVA 530
Query: 829 KVSIIPRGKGLGYAQYLPREQYL----YSKEQLLDRMCMTLGGRVSEEIFFG--RITTGA 882
K+SIIPRG+ G + P E+ L YS+ L ++M + LGGRV+EE+ FG +TTGA
Sbjct: 531 KISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGA 590
Query: 883 EDDLKKVTQSAYAQVAHFGMNEKVGNVSFD----MPQPGE-MVLEKPYSESTAQLIDNEV 937
+D +V++ A V FG ++K+G V+ P G+ M +K YS +TA ++D EV
Sbjct: 591 SNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEV 650
Query: 938 RSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIEL 980
R L+ AY R K ++ + K+A+ L++KE +D + + L
Sbjct: 651 RELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSL 693
Score = 147 (56.8 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 128 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
S +K + GV F DVAG ++AK+E+ E V+FLKNP +Y LGAKIPKG +L
Sbjct: 235 SKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLL 288
Score = 43 (20.2 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 396 EKYFMYGLIGSVAVLAAAVMYEMNYKEITWKDFINNVLTKGIV--EKLEVVNKKWVRVKL 453
E++ IG VAV A + + KD+ ++ T +V E E+V K +VR K
Sbjct: 606 ERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDY--SMATADVVDAEVRELVEKAYVRAKE 663
Query: 454 LPGNSMD 460
+ +D
Sbjct: 664 IITTQID 670
Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 609 TVSGSEFLEMFV 620
TV G EF+ +F+
Sbjct: 684 TVDGEEFMSLFI 695
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 230/533 (43%), Positives = 326/533 (61%)
Query: 469 IGSVDSFERNLELAQAQMHIDPANYLP--VIYKTEIELSSLSXXXXXXXXXXXXXXXXXX 526
I S+ E L+L +++I PA L + T +
Sbjct: 81 IASIYDIE-GLDLTDVKVNIQPAGGLDWGTMILTYLPFLIFGGLLIFIFTQARGANNQAV 139
Query: 527 XVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTG 586
S AKL N + F +VAG +EAK E+ E V FLK+ +++ LGA+IPKG +L G
Sbjct: 140 SFGRSKAKLFNMDKPTITFANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILLIG 199
Query: 587 PPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDE 646
PPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG SRVRD+F A+K+APCI+FIDE
Sbjct: 200 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDE 259
Query: 647 IDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGR 706
IDAVGR+RG GGH E+E TLNQ+LVEMDGF D+LD ALLRPGR
Sbjct: 260 IDAVGRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGR 319
Query: 707 FDRQIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEA 764
FDR++ + PDI GR +I K+H K PL ++ ++L+++ T GF+GAD+AN+ NEA
Sbjct: 320 FDRRVVLDKPDITGREAILKIHAKGKPLADTVNLENLAKQ----TVGFSGADLANLLNEA 375
Query: 765 ALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYA 824
A++AAR + + E++I+RV+AG E+K+ + +EK+ AYHE GH + ++ A
Sbjct: 376 AILAARKNRKVVETEDLEESIDRVIAGPERKSRRISTQEKEVTAYHETGHGLVLRLVQGA 435
Query: 825 DPLLKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAE 883
DP+ K+SI+ RG LG+ + LP E +YL ++ Q M L G V+EE+ F ++TGA
Sbjct: 436 DPVHKISIVARGMTLGHTRQLPNEDRYLMTRSQFKAMMAGLLAGYVAEELTFKELSTGAS 495
Query: 884 DDLKKVTQSAYAQVAHFGMNEKVGNVSF----DMPQPGEMVLE-KPYSESTAQLIDNEVR 938
DDL++ T A+ V +GM++K+G +F +M G + E K Y E A +ID EVR
Sbjct: 496 DDLRRATDIAHKMVTSYGMSDKLGPRTFGNKEEMVFLGREISEQKDYGEKVADMIDEEVR 555
Query: 939 SLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIEL-LGTRPFPEKS 990
LI A+ + K +L E+K ++ +AE+L +KE L+ ++ L +G P E +
Sbjct: 556 GLIEEAHQKAKTILTENKNRLKFIAEKLFEKETLEGAELENLFVGEFPVSESA 608
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 220/487 (45%), Positives = 311/487 (63%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A+ ++ I F DVAGC+EAK ++ E V++L+ P ++ LG +IP G +L G PG
Sbjct: 138 KSKARQLSEEQIKTTFADVAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILLVGQPG 197
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF T+SGS+F+EMFVGVG SRVRDMF A+K APCI+FIDEIDA
Sbjct: 198 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA 257
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQ+LVEMDGF DVLD ALLRPGRFDR
Sbjct: 258 VGRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDR 317
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAA 769
Q+ V PDI+GR I KVH++ K L D + +A TPGF+GAD+AN+ NEAAL AA
Sbjct: 318 QVTVGLPDIRGREQILKVHMR--KVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAA 375
Query: 770 RDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLK 829
R + MK F+ A ++++ G E+K+ V+ E++ AYHEAGHA+ G + DP+ K
Sbjct: 376 RTARRVVSMKEFDAAKDKIMMGSERKSMVMSESEREMTAYHEAGHAIIGRLVPDHDPVYK 435
Query: 830 VSIIPRGKGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDL 886
VSIIPRG+ LG YLP ++++ +SK+ L + GGRV+EE+ +G +++TGA +D+
Sbjct: 436 VSIIPRGRALGVTMYLPEQDRFSHSKQHLESNISSLYGGRVAEEVIYGSDKVSTGASNDI 495
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKP------YSESTAQLIDNEVRSL 940
++ T A V +G++EK+G + F + GE+ L + S+ TA+ ID E++S+
Sbjct: 496 ERATNIARKMVTQWGLSEKMGPMLF-AEEEGEVFLGRTSAKSLHMSDETAKTIDEEIKSV 554
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTG 1000
IS Y R + L+ + + + + L+K E +D + +L+ + +E+ +G
Sbjct: 555 ISRNYQRAEDLIKANMDVLHAMKDCLMKYETIDALQIDDLMARTSVRPPAGWED--KGGS 612
Query: 1001 SFEEDTS 1007
S D S
Sbjct: 613 SSNSDDS 619
Score = 125 (49.1 bits), Expect = 0.00045, P = 0.00045
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTER-- 184
+S A+ ++ I F DVAGC+EAK ++ E V++L+ P ++ LG +IP G +L +
Sbjct: 138 KSKARQLSEEQIKTTFADVAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILLVGQPG 197
Query: 185 -NKSRMAQRMLCTAK 198
K+ +A+ + AK
Sbjct: 198 TGKTLLAKAIAGEAK 212
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 946 (338.1 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 186/445 (41%), Positives = 288/445 (64%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
+RF+++AG +E+K+E++E V+F+KN ++Y ++GA++PKG +L GPPG+GKT+LA+A A E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKR--GGRNFG 660
ANVP+I SG EF+E++VG G R+R +F+ AR AP I+FIDEIDA+G KR G N
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G E + TLNQLLVEMDGF D LD ALLRPGRFDR ++VP PDI G
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
R I ++++K +K+DL +D+ K+A LTPGF+GAD+ NV NEA ++A R+ + + +
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIE-KIARLTPGFSGADLENVVNEATILATRNNKSLVTINE 384
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLR-YADPLLKVSIIPRGKGL 839
+A ++V G E+K+ +++ AYHEAGHA+ +FL+ DP+ K +II RG L
Sbjct: 385 LYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNAL 444
Query: 840 GYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITT--GAEDDLKKVTQSAYAQ 896
GY + +P +++ Y K Q+ ++ + +GGR +EEI FG+ T GA D+ + T+ AY
Sbjct: 445 GYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKM 504
Query: 897 VAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHK 956
V +GM++K+G +++ + G+ S T I+ EV+SL+ + ++ +L H+
Sbjct: 505 VTEWGMSDKLGPLNYKK-RMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSLSEEILRRHR 563
Query: 957 ASVEKVAERLLKKEILDRNDMIELL 981
++ +A LL KE L ++ ++
Sbjct: 564 KELDNLAFALLDKETLSGEEIKNII 588
Score = 126 (49.4 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 19/42 (45%), Positives = 37/42 (88%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+RF+++AG +E+K+E++E V+F+KN ++Y ++GA++PKG +L
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLL 187
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 946 (338.1 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 186/445 (41%), Positives = 288/445 (64%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
+RF+++AG +E+K+E++E V+F+KN ++Y ++GA++PKG +L GPPG+GKT+LA+A A E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKR--GGRNFG 660
ANVP+I SG EF+E++VG G R+R +F+ AR AP I+FIDEIDA+G KR G N
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G E + TLNQLLVEMDGF D LD ALLRPGRFDR ++VP PDI G
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
R I ++++K +K+DL +D+ K+A LTPGF+GAD+ NV NEA ++A R+ + + +
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIE-KIARLTPGFSGADLENVVNEATILATRNNKSLVTINE 384
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLR-YADPLLKVSIIPRGKGL 839
+A ++V G E+K+ +++ AYHEAGHA+ +FL+ DP+ K +II RG L
Sbjct: 385 LYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNAL 444
Query: 840 GYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITT--GAEDDLKKVTQSAYAQ 896
GY + +P +++ Y K Q+ ++ + +GGR +EEI FG+ T GA D+ + T+ AY
Sbjct: 445 GYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKM 504
Query: 897 VAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHK 956
V +GM++K+G +++ + G+ S T I+ EV+SL+ + ++ +L H+
Sbjct: 505 VTEWGMSDKLGPLNYKK-RMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSLSEEILRRHR 563
Query: 957 ASVEKVAERLLKKEILDRNDMIELL 981
++ +A LL KE L ++ ++
Sbjct: 564 KELDNLAFALLDKETLSGEEIKNII 588
Score = 126 (49.4 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 19/42 (45%), Positives = 37/42 (88%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+RF+++AG +E+K+E++E V+F+KN ++Y ++GA++PKG +L
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLL 187
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 215/479 (44%), Positives = 308/479 (64%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AKL++ I F DVAGC+EAK E+ E V++L++P ++ LG +IP G ++ GPPG
Sbjct: 141 KSKAKLMSEDQIKTTFADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMVGPPG 200
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGE+ VPF T+SGS+F+EMFVGVG SRVRDMF A+K APCI+FIDEIDA
Sbjct: 201 TGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDA 260
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQ+LVEMDGF DVLD ALLRPGRFDR
Sbjct: 261 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDR 320
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAA 769
Q+ V PD++GR I KVH++ K L D + +A TPGF+GAD+AN+ NEAAL AA
Sbjct: 321 QVVVGLPDVRGREQILKVHMR--KVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAA 378
Query: 770 RDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLK 829
R + M+ FE+A ++++ G E+++ V+ EK+ AYHEAGHA+ G + DP+ K
Sbjct: 379 RGNRRVVGMEEFERAKDKIMMGAERRSMVMSEAEKEMTAYHEAGHAIVGCLVPEHDPVHK 438
Query: 830 VSIIPRGKGLGYAQYLPREQYL-YSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDL 886
V+IIPRG+ LG +LP + S+ +L ++ + GGR++EE+ +G +++TGA D+
Sbjct: 439 VTIIPRGRALGVTFFLPEADAISQSRRKLESQISVAYGGRLAEELIYGTEKVSTGASQDI 498
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVRSL 940
K T A V +G ++K+G + + + GE+ L K S+ TA LID EV++
Sbjct: 499 KYATSIARNMVTQWGFSDKLGPLLY-AEEEGEVFLGRSMGKAKAMSDETATLIDTEVKAF 557
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGT 999
I Y+R K +L ++ + + + L+K E +D + +L+ R + + ++ G+
Sbjct: 558 IDKNYSRAKQILQDNVDILHSMKDALMKYETIDSLQIDDLMNRREVRQPADWQADENGS 616
Score = 133 (51.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AKL++ I F DVAGC+EAK E+ E V++L++P ++ LG +IP G ++
Sbjct: 141 KSKAKLMSEDQIKTTFADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLM 195
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 222/468 (47%), Positives = 307/468 (65%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AKL+ + V F DVAG +EAK E++E V+FLK+ Q++ LG KIPKG +L G PG
Sbjct: 140 KSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPG 199
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEANVPF ++SGS+F+EMFVGVG SRVRDMF +K+APCI+FIDEIDA
Sbjct: 200 TGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDA 259
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR RG GG+ E+E TLNQLLVEMDGF DVLD ALLRPGRFDR
Sbjct: 260 VGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDR 319
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAA 769
Q+ + PDI GR I VH+K + T D + R +A TPGF+GAD+AN+ NEAALIAA
Sbjct: 320 QVTISIPDINGREKIINVHIKKVPTAPDVN--IRTIARGTPGFSGADLANLVNEAALIAA 377
Query: 770 RDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLK 829
R + M FE A ++V+ G E+K+ ++ EE++ AYHEAGHA+ +F +DP+ K
Sbjct: 378 RLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEASDPIHK 437
Query: 830 VSIIPRGKGLGYAQYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDL 886
+IIPRG+ LG LP ++ +++E+++ + + +GGR +EE+ FG ++T+GA D+
Sbjct: 438 ATIIPRGRSLGLVMRLPESDRVSHTREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDI 497
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYT 946
K+ T A A V +GM++KVG + + + + S + A LID EV+ ++++A
Sbjct: 498 KQATDLAKAMVMKWGMSDKVGPL-YHNDDKNDTI-----SNNLANLIDEEVKLIVTSALE 551
Query: 947 RTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEE 994
R K+LL EH S+ VA+ LL+ E L D+ ++ + K EE
Sbjct: 552 RAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNIINGKELT-KDDIEE 598
Score = 134 (52.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AKL+ + V F DVAG +EAK E++E V+FLK+ Q++ LG KIPKG +L
Sbjct: 140 KSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLL 194
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 222/468 (47%), Positives = 307/468 (65%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AKL+ + V F DVAG +EAK E++E V+FLK+ Q++ LG KIPKG +L G PG
Sbjct: 140 KSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPG 199
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEANVPF ++SGS+F+EMFVGVG SRVRDMF +K+APCI+FIDEIDA
Sbjct: 200 TGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDA 259
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR RG GG+ E+E TLNQLLVEMDGF DVLD ALLRPGRFDR
Sbjct: 260 VGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDR 319
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAA 769
Q+ + PDI GR I VH+K + T D + R +A TPGF+GAD+AN+ NEAALIAA
Sbjct: 320 QVTISIPDINGREKIINVHIKKVPTAPDVN--IRTIARGTPGFSGADLANLVNEAALIAA 377
Query: 770 RDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLK 829
R + M FE A ++V+ G E+K+ ++ EE++ AYHEAGHA+ +F +DP+ K
Sbjct: 378 RLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEASDPIHK 437
Query: 830 VSIIPRGKGLGYAQYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDL 886
+IIPRG+ LG LP ++ +++E+++ + + +GGR +EE+ FG ++T+GA D+
Sbjct: 438 ATIIPRGRSLGLVMRLPESDRVSHTREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDI 497
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYT 946
K+ T A A V +GM++KVG + + + + S + A LID EV+ ++++A
Sbjct: 498 KQATDLAKAMVMKWGMSDKVGPL-YHNDDKNDTI-----SNNLANLIDEEVKLIVTSALE 551
Query: 947 RTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEE 994
R K+LL EH S+ VA+ LL+ E L D+ ++ + K EE
Sbjct: 552 RAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNIINGKELT-KDDIEE 598
Score = 134 (52.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AKL+ + V F DVAG +EAK E++E V+FLK+ Q++ LG KIPKG +L
Sbjct: 140 KSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLL 194
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 220/457 (48%), Positives = 303/457 (66%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A+L+ S V F DVAG EEAK E++E V+FLK+ Q++ LG KIPKG +L G PG
Sbjct: 142 KSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPG 201
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEANVPF ++SGS+F+EMFVGVG SRVRDMF +KHAPCI+F+DEIDA
Sbjct: 202 TGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDA 261
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR RG GG+ E+E TLNQLLVEMDGF DVLD ALLRPGRFDR
Sbjct: 262 VGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDR 321
Query: 710 QIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
Q+ + PDI GR I VH K PL D+D R +A TPGF+GAD+AN+ NEAALI
Sbjct: 322 QVTISIPDINGREKIIAVHAKKVPLAPDVDL----RVIARGTPGFSGADLANLVNEAALI 377
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR + M FE A ++V+ G E+K+ V++ EE++ AYHEAGHAV + +DP+
Sbjct: 378 AARLDKKIVTMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPI 437
Query: 828 LKVSIIPRGKGLGYAQYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAED 884
K +IIPRG+ LG LP ++ +++E++L + + +GGR +EE+ FG ++T+GA
Sbjct: 438 HKATIIPRGRSLGLVMRLPETDRVSHTREKMLADLTVAMGGRAAEELIFGYNKVTSGASS 497
Query: 885 DLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNA 944
D+K+ T A + V +GM++ VG + + + E + S + A LID+EV+S++S A
Sbjct: 498 DIKQATDLAKSMVMKWGMSDSVGPL-YHSDEAHERI-----STNLANLIDDEVKSIVSTA 551
Query: 945 YTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
K +L +H ++ +A LL+ E L +D+ +++
Sbjct: 552 LAEAKDVLTKHSDALHAIAANLLEFETLTGDDIADII 588
Score = 137 (53.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S A+L+ S V F DVAG EEAK E++E V+FLK+ Q++ LG KIPKG +L
Sbjct: 142 KSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLL 196
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 220/457 (48%), Positives = 303/457 (66%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A+L+ S V F DVAG EEAK E++E V+FLK+ Q++ LG KIPKG +L G PG
Sbjct: 142 KSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPG 201
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEANVPF ++SGS+F+EMFVGVG SRVRDMF +KHAPCI+F+DEIDA
Sbjct: 202 TGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDA 261
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR RG GG+ E+E TLNQLLVEMDGF DVLD ALLRPGRFDR
Sbjct: 262 VGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDR 321
Query: 710 QIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
Q+ + PDI GR I VH K PL D+D R +A TPGF+GAD+AN+ NEAALI
Sbjct: 322 QVTISIPDINGREKIIAVHAKKVPLAPDVDL----RVIARGTPGFSGADLANLVNEAALI 377
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR + M FE A ++V+ G E+K+ V++ EE++ AYHEAGHAV + +DP+
Sbjct: 378 AARLDKKIVTMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPI 437
Query: 828 LKVSIIPRGKGLGYAQYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAED 884
K +IIPRG+ LG LP ++ +++E++L + + +GGR +EE+ FG ++T+GA
Sbjct: 438 HKATIIPRGRSLGLVMRLPETDRVSHTREKMLADLTVAMGGRAAEELIFGYNKVTSGASS 497
Query: 885 DLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNA 944
D+K+ T A + V +GM++ VG + + + E + S + A LID+EV+S++S A
Sbjct: 498 DIKQATDLAKSMVMKWGMSDSVGPL-YHSDEAHERI-----STNLANLIDDEVKSIVSTA 551
Query: 945 YTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
K +L +H ++ +A LL+ E L +D+ +++
Sbjct: 552 LAEAKDVLTKHSDALHAIAANLLEFETLTGDDIADII 588
Score = 137 (53.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S A+L+ S V F DVAG EEAK E++E V+FLK+ Q++ LG KIPKG +L
Sbjct: 142 KSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLL 196
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 929 (332.1 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 209/459 (45%), Positives = 283/459 (61%)
Query: 545 FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN 604
FKDV GC++AK E+ E V +LKNP ++ LG K+PKG +LTG PGTGKTLLAKA AGEA
Sbjct: 361 FKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 420
Query: 605 VPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSE 664
VPF +GSEF EMFVGVG RVR +F A+K APCI+FIDEIDAVG R + + GH++
Sbjct: 421 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--KQWEGHTK 478
Query: 665 QENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASI 724
+ TL+QLLVEMDGF D+LD AL RPGRFDR I VP+PD++GR I
Sbjct: 479 K--TLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEI 536
Query: 725 FKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
+++L KP+ D+D ++R TPGF GAD+AN+ N AA+ AA + + + E
Sbjct: 537 LELYLQGKPMSEDVDVKAIARG----TPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLE 592
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
A +R+V G E+KT + + KK AYHE+GHA+ + A P+ K +I+PRG LG
Sbjct: 593 FAKDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMV 652
Query: 843 QYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP ++ SK QLL R+ + +GGRV+EE+ FG ITTGA DL + T+ A V+
Sbjct: 653 TQLPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSS 712
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
GM+E +G V + E+P S+ ++ ID EV L+ AY R K+LL H+ +
Sbjct: 713 CGMSEAIGPVH---------IKERPSSDMQSR-IDAEVVKLLREAYERVKSLLKRHEKQL 762
Query: 960 EKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEG 998
+A LL+ E L D+ +L + EK ++ EG
Sbjct: 763 HTLANALLEYETLTAEDIKRILLPKQEGEKFEEQQQEEG 801
Score = 130 (50.8 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 142 FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
FKDV GC++AK E+ E V +LKNP ++ LG K+PKG +LT
Sbjct: 361 FKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLT 401
Score = 38 (18.4 bits), Expect = 3.0e-95, Sum P(2) = 3.0e-95
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 205 LHNINHGRYSSFHINNSLATLPKSNFPPTTVESVLHQWR 243
LH + Y ++SL+ P+S + SVLH R
Sbjct: 16 LHTSSFKLYPCLFSSSSLSFCPQSLSSFYRLSSVLHNSR 54
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
Identities = 224/490 (45%), Positives = 316/490 (64%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A+L++ V F DVAG +EAK E+ E V FL+ P+++ LG KIPKG +L GPPG
Sbjct: 141 KSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPG 200
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF ++SGS+F+EMFVGVG SRVRDMF +K+APC++FIDEIDA
Sbjct: 201 TGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDA 260
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR RG GG+ E+E TLNQLLVEMDGF DVLD ALLRPGRFDR
Sbjct: 261 VGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDR 320
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAA 769
QI + PDI GR I +VHLK + T ++S +A TPGF+GAD+AN+ NE+ALIAA
Sbjct: 321 QITISIPDIAGRQKILEVHLKKIPT-APNVEVSI-IARGTPGFSGADLANLVNESALIAA 378
Query: 770 RDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLK 829
R + + FE A ++++ GME+K+ V++ EEK AYHEAGHA+ L +DP+ K
Sbjct: 379 RRNKKVVTNEDFEYARDKILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDPIHK 438
Query: 830 VSIIPRGKGLGYAQYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDL 886
+IIPRG+ LG LP ++ +++ ++ + + +GGR +E++ FG + T+GA D+
Sbjct: 439 ATIIPRGRALGLVMRLPEHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDI 498
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSF-DMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
K+ T A + V +GM+EKVG + + + P +L S + LID+EV+ L+++A
Sbjct: 499 KQATHLARSMVTKWGMSEKVGPLLYGEQNDPNNHIL----SIEMSNLIDSEVKQLVTDAL 554
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEGTGSF--E 1003
+L E+ S+ +VA+ LL+ E L ++ +LL + F +K+ ++ V S E
Sbjct: 555 KEATKILNENIESLHRVAKALLEYETLTGQELSDLLEGKSFLKKAPDDKKVVSKSSLDVE 614
Query: 1004 EDTSLPEGLK 1013
+DT E L+
Sbjct: 615 DDTVDKETLE 624
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S A+L++ V F DVAG +EAK E+ E V FL+ P+++ LG KIPKG +L
Sbjct: 141 KSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLL 195
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 215/475 (45%), Positives = 302/475 (63%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AK ++ F DVAG +EA E+ E +FL+NP +Y LGAKIPKG +L GPPG
Sbjct: 147 KSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPG 206
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+A AGEA VPF T+SGS+F+EMFVGVG SRVRD+F A++++PCI+F+DEIDA
Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA 266
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GGH E+E TLNQLLVEMDGF D+LD ALLRPGRFDR
Sbjct: 267 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDR 326
Query: 710 QIFVPAPDIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
QI V PD+ GR ++ +VH K P+ D D D L+++ T G TGAD+ANV NEAAL+
Sbjct: 327 QIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKR----TVGMTGADLANVINEAALL 382
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AR+ T I E+A++RV+ G +K ++ +EKK AYHE GH +A W + +P+
Sbjct: 383 TARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPI 442
Query: 828 LKVSIIPRGKGLGYAQYLPREQY-LYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDL 886
KV+I+ RG+ G+A +P E L ++ +++ ++ +GGR +EE+ F TTGA D+
Sbjct: 443 YKVTILARGRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDI 502
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDM----PQPGEMVLEKP-YSESTAQLIDNEVRSLI 941
++ T+ A + V FGM+ K+G V + P G + +P YS A+ ID EVR LI
Sbjct: 503 EQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLI 562
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLG-TRPFPEKSTYEEF 995
A+T +L E++ ++ +A LL+KE L R ++ + P + +++F
Sbjct: 563 EAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVEKRPRLTMFDDF 617
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 925 (330.7 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 211/471 (44%), Positives = 291/471 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
+ F DVAG +EAK E+ E V FL+NP++Y+ LGA+ P+G +L G PGTGKTLLAKA AGE
Sbjct: 322 ITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 381
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR-NFGG 661
A VPFI+ S SEF+E++VG+G SRVRD+F+ A+K AP I+FIDEIDAV + R G+ G
Sbjct: 382 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGS 441
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+ E+E TLNQLL EMDGF DVLD AL RPGRFDR + V PD GR
Sbjct: 442 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGR 501
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
SI +VH+ + L D +A++T GFTGAD+AN+ NEAAL+A R T + F
Sbjct: 502 ESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDF 561
Query: 782 EQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWF---LRYADPLL-KVSIIPR-G 836
QA+ER +AG+EKK+ L+ EK VA HEAGHAV G L P + K+SI+PR G
Sbjct: 562 IQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTG 621
Query: 837 KGLGYAQYLP---REQYLYSKEQLLDRMCMTLGGRVSEEIFF-GRITTGAEDDLKKVTQS 892
LG+ Y+P ++YL ++LL R+ LGGR +EE+ + GRI+TGA DD+++ T
Sbjct: 622 GALGFT-YIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTGAFDDIRRATDM 680
Query: 893 AYAQVAHFGMNEKVGNVSFDMPQPGEMVLE--KPYSESTAQLID---NEVRSLISNAYTR 947
AY VA +G+N+K+G VS G + P+ +L+D EV L+ +A
Sbjct: 681 AYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSALDV 740
Query: 948 TKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEG 998
+++ + +E + +L +KE ++ ++ + L PE+ FVEG
Sbjct: 741 ALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLSMVVAPEELAV--FVEG 789
Score = 124 (48.7 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+ F DVAG +EAK E+ E V FL+NP++Y+ LGA+ P+G +L
Sbjct: 322 ITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLL 363
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 215/463 (46%), Positives = 298/463 (64%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A+ + GV F DVAG +EAK E+ E V FLK P+++ +GAKIPKG +L GPPG
Sbjct: 156 KSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPG 215
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG SRVRD+F A+++APC++FIDEIDA
Sbjct: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDA 275
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GG+ E+E TLNQLL EMDGF DVLD AL+RPGRFDR
Sbjct: 276 VGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDR 335
Query: 710 QIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
Q+ V APD GR I +VH K L ++ D ++R+ TPGF+GAD+AN+ NEAA++
Sbjct: 336 QVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARR----TPGFSGADLANLLNEAAIL 391
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AR + I + + A++RVVAGME T ++ + K+ +AYHE GHA+ G L+ DP+
Sbjct: 392 TARRRKSAITLLEIDDAVDRVVAGMEG-TPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPV 450
Query: 828 LKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAED 884
KV++IPRG+ G + P E Q L +K QL+ R+ +GGR +EE FG +TTGA
Sbjct: 451 QKVTLIPRGQAQGLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGG 510
Query: 885 DLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVL------EKPYSESTAQLIDNEVR 938
DL++VT+ A V FGM+ +G +S + GE+ L YSE A ID +VR
Sbjct: 511 DLQQVTEMARQMVTRFGMSN-LGPISLES-SGGEVFLGGGLMNRSEYSEEVATRIDAQVR 568
Query: 939 SLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
L + + ++ E + V+++ + L++KE +D + +++
Sbjct: 569 QLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIV 611
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S A+ + GV F DVAG +EAK E+ E V FLK P+++ +GAKIPKG +L
Sbjct: 156 KSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLL 210
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 905 (323.6 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 189/443 (42%), Positives = 281/443 (63%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
VRF DV GC+EAK E+ E V FL NP+++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 312 VRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGE 371
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A VPF +SGSEF E++VGVG RVR++F+ AR +P I+FIDE+DA+G KR R+ +
Sbjct: 372 AGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKRNERD-AAY 430
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
+Q TLNQLL E+DGF ++LDKAL RPGRFDR++ V PD++GR
Sbjct: 431 VKQ--TLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGRM 488
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K H+K ++ D D +A T GF+GAD+ N+ N+AA+ A+R+ + + K F+
Sbjct: 489 DILKHHMKNVQISTDVD--VAVIARGTSGFSGADLENLVNQAAIFASRNKQSKVTPKDFD 546
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
A ++++ G E ++ ++Q ++K AYHEAGHA+ +F + PL K++I+PRG LG
Sbjct: 547 YAKDKIIMGAEARSRIIQDKDKLLTAYHEAGHALVAYFSPSSMPLYKITIMPRGMSLGST 606
Query: 843 QYLPREQYLYSKE--QLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVA 898
+LP E + SK Q L + +++GG+V+EE+ +G ++T+G DL T++A+ V
Sbjct: 607 HFLP-EMDMVSKNYVQYLSDIDVSMGGKVAEELIYGEDKVTSGISADLASATRTAFTLVT 665
Query: 899 HFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKAS 958
FG ++K+GNV D+ + + S T Q I+ EVR L+ A R +L E +
Sbjct: 666 RFGYSKKLGNV--DLYANYDSL-----SSETKQEIEAEVRRLVEEARQRATNILTERRHE 718
Query: 959 VEKVAERLLKKEILDRNDMIELL 981
+E + + L+K E L + +M ++L
Sbjct: 719 LELLTKALIKYETLTKEEMEKVL 741
Score = 133 (51.9 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
VRF DV GC+EAK E+ E V FL NP+++ LG K+PKG +L
Sbjct: 312 VRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGKLPKGVLL 353
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 215/461 (46%), Positives = 292/461 (63%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S+ KL+NS V+F DVAG EEAK E+ E V+FLK P++YI LGAKIPKG +L GPPGT
Sbjct: 163 SSKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGT 222
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTLLAKA AGEA+VPF +VSGS F+EMFVGVG SRVRD+F A+K AP I+FIDEIDA+
Sbjct: 223 GKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAI 282
Query: 651 GRKRGGRNF-GGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXX-DVLDKALLRPGRFD 708
G+ R GG+ E+E TLNQLL EMDGF +VLD ALLRPGRFD
Sbjct: 283 GKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFD 342
Query: 709 RQIFVPAPDIKGRASIFKVHLKPLKTD--LDRDDLSRKLAALTPGFTGADIANVCNEAAL 766
RQ+ V PD KGR I KVH+K +K + +D++R LT G GAD+AN+ NEAAL
Sbjct: 343 RQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIAR----LTAGLAGADLANIINEAAL 398
Query: 767 IAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADP 826
+A RD + +A+ER +AG+EKK+ + +EKK V YHE GHA+ + A
Sbjct: 399 LAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKR 458
Query: 827 LLKVSIIPRG-KGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAED 884
+ KVS+IPRG LGY P E ++L K +L+ + + LGGR +EE+F G I+TGA +
Sbjct: 459 VSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVFIGEISTGASN 518
Query: 885 DLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQ----PGEMVLEKPYSESTAQLIDNEVRSL 940
DL++ T A ++ +GM+E G + + + G + K YSE A+ +D+ V+
Sbjct: 519 DLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTI-KDYSEKMAESLDDYVKKT 577
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
+ Y K L +K ++E + L ++E ++ N + E++
Sbjct: 578 LDERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREII 618
Score = 164 (62.8 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 128 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
S+ KL+NS V+F DVAG EEAK E+ E V+FLK P++YI LGAKIPKG +L
Sbjct: 163 SSKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLL 216
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 907 (324.3 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 194/446 (43%), Positives = 282/446 (63%)
Query: 541 IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATA 600
I VRF DV G +EAK E+ E V+FL++P + LG K+P+G +LTGPPGTGKT+LA+A A
Sbjct: 262 INVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVA 321
Query: 601 GEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG 660
GEANVPF +SGS+F EM+VGVG RVR++F+ ARK AP I+FIDE+DA+G+KR R+
Sbjct: 322 GEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARD-A 380
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXX----XXXXXXXDVLDKALLRPGRFDRQIFVPAP 716
H Q TLNQLLV++DGF + LD AL RPGRFDR I VP P
Sbjct: 381 AHMRQ--TLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLP 438
Query: 717 DIKGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHT 774
D++GR +I H + PL D+D ++R T GF GAD+AN+ N+AA+ A+++L T
Sbjct: 439 DVRGRLAILLQHTRHVPLGKDVDLSIIARG----TSGFAGADLANLINQAAVYASKNLST 494
Query: 775 TIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIP 834
+ M+ E + +R++ G E+K+ + PE K AYHE GHA+ F + A K +I+P
Sbjct: 495 AVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATIMP 554
Query: 835 RGKGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDDLKKVTQ 891
RG LG LP ++ +++E+ L + +T+GGR +EE+ +G+ IT+GA +D+ K TQ
Sbjct: 555 RGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQ 614
Query: 892 SAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKAL 951
A V FGM++++G VS + EM S +T L+++E++SL+ +Y R+ +L
Sbjct: 615 VARRMVTEFGMSDRIGPVSLE----AEM---DNLSPATRALVESEIKSLLEASYERSLSL 667
Query: 952 LIEHKASVEKVAERLLKKEILDRNDM 977
L HK ++ +A L+ E L +M
Sbjct: 668 LKSHKKELDALATALVDYEFLTAEEM 693
Score = 124 (48.7 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 138 IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
I VRF DV G +EAK E+ E V+FL++P + LG K+P+G +LT
Sbjct: 262 INVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLT 306
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 902 (322.6 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 207/471 (43%), Positives = 286/471 (60%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
+ F DVAG +EAK E+ E V FLKNP +Y+ LGA+ P+G +L G PGTGKTLLAKA AGE
Sbjct: 326 ITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 385
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR-NFGG 661
++VPFI+ S SEF+E++VG+G SRVRD+F+ A+K AP I+FIDEIDAV + R G+
Sbjct: 386 SDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVS 445
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+ E+E TLNQLL EMDGF DVLD AL RPGRFDR + V +PD GR
Sbjct: 446 NDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGR 505
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
SI KVH+ + L D +A++T GFTGAD+AN+ NEAAL+A R T+ F
Sbjct: 506 ESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDF 565
Query: 782 EQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGW----FLRYADPLLKVSIIPRGK 837
A+ER +AG+EKKT L+ EK VA HEAGHAV G L + K+SI+PR
Sbjct: 566 IHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSG 625
Query: 838 G-LGYAQYLP---REQYLYSKEQLLDRMCMTLGGRVSEEIFF-GRITTGAEDDLKKVTQS 892
G LG+ Y+P ++YL ++L R+ LGGR +EE+ + GRI+TGA DD+++ T
Sbjct: 626 GALGFT-YIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSGRISTGALDDIRRATDM 684
Query: 893 AYAQVAHFGMNEKVGNVSFDMPQPGEMVLE--KPYSESTAQLID---NEVRSLISNAYTR 947
AY VA +G+NEK+G VS G + P+ L+D EV +L+ +A
Sbjct: 685 AYKAVAEYGLNEKIGPVSVATLSAGGIDDSGGSPWGRDQGHLVDLVQREVTNLLQSALDV 744
Query: 948 TKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVEG 998
++ + +E + +L +E ++ ++ + L R P + F++G
Sbjct: 745 ALTVVRANPDVLEGLGAQLEDEEKVEGEELQKWLN-RVVPSEEL-AVFIKG 793
Score = 125 (49.1 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+ F DVAG +EAK E+ E V FLKNP +Y+ LGA+ P+G +L
Sbjct: 326 ITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLL 367
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
Identities = 218/461 (47%), Positives = 297/461 (64%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AK + GV F DVAG +EAK + ME V FLK P+++ +GAKIPKG +L GPPG
Sbjct: 211 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPG 270
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG SRVRD+F A+++APCI+F+DEIDA
Sbjct: 271 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 330
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GG+ E+E TLNQLL EMDGF D+LD ALLRPGRFDR
Sbjct: 331 VGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDR 390
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAAL-TPGFTGADIANVCNEAALIA 768
Q+ V PD+KGR I KVH K D +D+S ++ A+ TPGF+GAD+AN+ NEAA++A
Sbjct: 391 QVSVDVPDVKGRTDILKVHAGNKKFD---NDVSLEIIAMRTPGFSGADLANLLNEAAILA 447
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
R T+I K + +I+R+VAGME T + + K VAYHE GHAV G D +
Sbjct: 448 GRRARTSISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDAVQ 506
Query: 829 KVSIIPRGKGLGYAQYLPREQ-YLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDD 885
KV++IPRG+ G ++P + L SK+QL R+ LGGR +EEI FG +TTGA D
Sbjct: 507 KVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGD 566
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSF-DMPQPGEMVLE----KPYSESTAQLIDNEVRSL 940
L+++T A V FGM++ +G S D ++++ SE A+ ID+ V+ L
Sbjct: 567 LQQITGLARQMVTTFGMSD-IGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKL 625
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
+AY + + ++ +++K+ E LL+KE + ++ +L
Sbjct: 626 SDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAIL 666
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AK + GV F DVAG +EAK + ME V FLK P+++ +GAKIPKG +L
Sbjct: 211 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLL 265
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 208/464 (44%), Positives = 303/464 (65%)
Query: 530 ESTAKLIN-SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPP 588
+S AK+ S+ + V F DVAG E K+E+ E V++L++P+++ +G K+PKG +L GPP
Sbjct: 158 KSGAKMYTPSAKVKVTFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLLVGPP 217
Query: 589 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEID 648
GTGKTLLA+A AGEA+V F+++S S+F+EMFVGVG RVRD+F+ A+K AP I+FIDE+D
Sbjct: 218 GTGKTLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELD 277
Query: 649 AVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFD 708
AVGR RG GGH E+E TLNQLL EMDGF DVLD ALLRPGRFD
Sbjct: 278 AVGRSRGAGLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFD 337
Query: 709 RQIFVPAPDIKGRASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALI 767
R + + PD + R I VH + K LD+D DL+ +A TPG GAD+ N+ NEAA++
Sbjct: 338 RHVVIDRPDWRDREKILHVHTR--KIPLDKDVDLA-VIARGTPGMAGADLENLVNEAAIL 394
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
AAR+ T+ M+H E+A ++V+ G E+K + + +EK+ AYHEAGH + L DP+
Sbjct: 395 AARENAATVTMEHMERAKDKVLMGGERKMFITE-QEKRITAYHEAGHTIVAKLLPGTDPV 453
Query: 828 LKVSIIPRGKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDL 886
KV+IIPRG+ LG Q LP + +Y Y K L++R+ + LGGR +E FG ++TGA++DL
Sbjct: 454 HKVTIIPRGQALGVTQQLPEDDRYHYPKSYLMNRLSVALGGRQAERAVFGDLSTGAQNDL 513
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSF----DMPQPG-EMVLEKPYSESTAQLIDNEVRSLI 941
K V A V +GM++K+G ++F + P G ++ EK +SE A LID E+ ++I
Sbjct: 514 KMVNDLAEKMVCQWGMSDKIGAMTFSRGEEHPFLGRKLAEEKTFSEQMAWLIDQEIAAII 573
Query: 942 SNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRP 985
A + ++ ++ ++ + + L+++E LD + E+L + P
Sbjct: 574 KEAEQKADNVIANNRGKLDALVDALMEEETLDGKRIDEVLASVP 617
Score = 133 (51.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 82 VIYKTEIELSSLSGILPTLLIIGRSAEMMXXXXXXXXXXXXXXVMESTAKLIN-SSDIGV 140
V +T +S L +LP +LIIG M +S AK+ S+ + V
Sbjct: 113 VTTETSPIVSGLLYVLPWILIIGVWWLAMRGMRGQGPTSVMGNFSKSGAKMYTPSAKVKV 172
Query: 141 RFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
F DVAG E K+E+ E V++L++P+++ +G K+PKG +L
Sbjct: 173 TFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLL 213
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 900 (321.9 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 194/442 (43%), Positives = 280/442 (63%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FL+NPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 285 VTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 344
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ +APC++FIDE+D+VG KR +
Sbjct: 345 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPMHPY 404
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 405 SRQ--TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 462
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +LK +K D + + +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 463 EILKWYLKKIKVDSAVE--AEVIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELE 520
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
A ++++ G E+++ + K+ AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 521 FAKDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHV 580
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M +++GGRV+EE+ FG ITTGA D T+ A V
Sbjct: 581 SMLPENDRWSETRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDSATKIAKMMVTR 640
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM+EK+G +++ ++ + P +++ I++EVR L+ ++Y R KALL
Sbjct: 641 FGMSEKLGVMTYS-----DLTKQSPETQAA---IEHEVRILLRDSYERAKALLKSRAKEH 692
Query: 960 EKVAERLLKKEILDRNDMIELL 981
+AE LL+ E LD + I+L+
Sbjct: 693 RNLAEALLRYETLDAKE-IQLV 713
Score = 118 (46.6 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FL+NPQ++ LG K+PKG +L
Sbjct: 285 VTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILL 326
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 889 (318.0 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 195/446 (43%), Positives = 276/446 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 312 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 371
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ +APC++FIDE+D+VG KR +
Sbjct: 372 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 431
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 432 SRQ--TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 489
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 490 EILKWYLNKIKFDQSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 547
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 548 FSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHV 607
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M +++GGRV+EE+ FG ITTGA D T+ A V
Sbjct: 608 SLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTK 667
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM+EK+G +++ G++ S T I+ E+R L+ ++Y R K +L H
Sbjct: 668 FGMSEKLGVMTYS--DTGKL------SPETQSAIEQEIRILLRDSYERAKHILKTHAKEH 719
Query: 960 EKVAERLLKKEILDRNDM-IELLGTR 984
+ +AE LL E LD ++ I L G +
Sbjct: 720 KNLAEALLTYETLDAKEIQIVLEGKK 745
Score = 122 (48.0 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L
Sbjct: 312 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILL 353
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 889 (318.0 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 195/446 (43%), Positives = 276/446 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ +APC++FIDE+D+VG KR +
Sbjct: 396 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 455
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 456 SRQ--TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 513
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 514 EILKWYLNKIKFDQSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 571
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 572 FSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHV 631
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M +++GGRV+EE+ FG ITTGA D T+ A V
Sbjct: 632 SLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTK 691
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM+EK+G +++ G++ S T I+ E+R L+ ++Y R K +L H
Sbjct: 692 FGMSEKLGVMTYS--DTGKL------SPETQSAIEQEIRILLRDSYERAKHILKTHAKEH 743
Query: 960 EKVAERLLKKEILDRNDM-IELLGTR 984
+ +AE LL E LD ++ I L G +
Sbjct: 744 KNLAEALLTYETLDAKEIQIVLEGKK 769
Score = 122 (48.0 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L
Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILL 377
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 889 (318.0 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 195/446 (43%), Positives = 276/446 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 331 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 390
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ +APC++FIDE+D+VG KR +
Sbjct: 391 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 450
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 451 SRQ--TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 508
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 509 EILKWYLNKIKFDQSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 566
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 567 FSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHV 626
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M +++GGRV+EE+ FG ITTGA D T+ A V
Sbjct: 627 SLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTK 686
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM+EK+G +++ G++ S T I+ E+R L+ ++Y R K +L H
Sbjct: 687 FGMSEKLGVMTYS--DTGKL------SPETQSAIEQEIRILLRDSYERAKHILKTHAKEH 738
Query: 960 EKVAERLLKKEILDRNDM-IELLGTR 984
+ +AE LL E LD ++ I L G +
Sbjct: 739 KNLAEALLTYETLDAKEIQIVLEGKK 764
Score = 122 (48.0 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L
Sbjct: 331 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILL 372
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 214/461 (46%), Positives = 293/461 (63%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S AK + GV F DVAG +EAK + ME V FLK P+++ +GA+IPKG +L GPPG
Sbjct: 204 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 263
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG SRVRD+F A+++APCI+F+DEIDA
Sbjct: 264 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 323
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
VGR+RG GG+ E+E TLNQLL EMDGF D+LD ALLRPGRFDR
Sbjct: 324 VGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDR 383
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAAL-TPGFTGADIANVCNEAALIA 768
Q+ V PD+KGR I KVH K + +S ++ A+ TPGF+GAD+AN+ NEAA++A
Sbjct: 384 QVSVDVPDVKGRTDILKVHSGNKKFE---SGVSLEVIAMRTPGFSGADLANLLNEAAILA 440
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
R T I K + +I+R+VAGME T + + K VAYHE GHA+ G D +
Sbjct: 441 GRRGKTAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQ 499
Query: 829 KVSIIPRGKGLGYAQYLPREQ-YLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDD 885
KV++IPRG+ G ++P + L SK+QL R+ LGGR +EE+ FG +TTGA D
Sbjct: 500 KVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSD 559
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSF-DMPQPGEMVLE----KPYSESTAQLIDNEVRSL 940
L+++T A V FGM+E +G S D + ++++ SE A ID V++L
Sbjct: 560 LQQITGLAKQMVTTFGMSE-IGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTL 618
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELL 981
AY + + ++ +++K+ E LL+KE + ++ +L
Sbjct: 619 SDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAIL 659
Score = 136 (52.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+S AK + GV F DVAG +EAK + ME V FLK P+++ +GA+IPKG +L
Sbjct: 204 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLL 258
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 888 (317.7 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 195/446 (43%), Positives = 275/446 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ +APC++FIDE+D+VG KR +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 397
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 398 SRQ--TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 456 EILKWYLNKIKFDKSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 513
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 514 FSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHV 573
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M +++GGRV+EE+ FG ITTGA D T+ A V
Sbjct: 574 SLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTK 633
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM+EK+G +++ G++ S T I+ E+R L+ +Y R K +L H
Sbjct: 634 FGMSEKLGVMTYS--DTGKL------SPETQSAIEQEIRILLRESYERAKHILKTHAKEH 685
Query: 960 EKVAERLLKKEILDRNDM-IELLGTR 984
+ +AE LL E LD ++ I L G +
Sbjct: 686 KNLAEALLTYETLDAKEIQIVLEGKK 711
Score = 122 (48.0 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILL 319
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 888 (317.7 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 195/446 (43%), Positives = 275/446 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ +APC++FIDE+D+VG KR +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 397
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 398 SRQ--TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 456 EILKWYLNKIKFDKSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 513
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 514 FSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHV 573
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M +++GGRV+EE+ FG ITTGA D T+ A V
Sbjct: 574 SLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTK 633
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM+EK+G +++ G++ S T I+ E+R L+ +Y R K +L H
Sbjct: 634 FGMSEKLGVMTYS--DTGKL------SPETQSAIEQEIRILLRESYERAKHILKTHAKEH 685
Query: 960 EKVAERLLKKEILDRNDM-IELLGTR 984
+ +AE LL E LD ++ I L G +
Sbjct: 686 KNLAEALLTYETLDAKEIQIVLEGKK 711
Score = 122 (48.0 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILL 319
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 866 (309.9 bits), Expect = 2.1e-99, Sum P(3) = 2.1e-99
Identities = 185/442 (41%), Positives = 275/442 (62%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
+ F+ V G EEAK E+ + V FL+NPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 292 ITFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 351
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ APC++FIDE+D+VG KR +
Sbjct: 352 ADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKRIESPMHPY 411
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 412 SRQ--TINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKGRT 469
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I + +LK +K D D + +A T GF+GA++ N+ N+AAL AA D + MK +
Sbjct: 470 EILEWYLKKIKVDSAID--AEIIARGTVGFSGAELENLVNQAALKAAADGKDLVTMKELK 527
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
A ++++ G E+++ + K AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 528 FAKDKILMGPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMPINKATIMPRGPSLGHV 587
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M +++GGRV+EE+ FG +IT+GA D T+ A V
Sbjct: 588 SLLPENDRWSETRAQLLAQMDVSMGGRVAEELVFGNDQITSGASSDFDGATKIAQMMVTR 647
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM++K+G +++ L K +S T ++ E+R L+ ++Y R K +L +
Sbjct: 648 FGMSDKLGVMTYSD-------LTK-HSPETRAAVEQEIRVLLQSSYERAKKILKTYSKEH 699
Query: 960 EKVAERLLKKEILDRNDMIELL 981
+ +A+ LL E L+ ++ +L
Sbjct: 700 KLLADALLTYETLNAKEIQMIL 721
Score = 114 (45.2 bits), Expect = 2.1e-99, Sum P(3) = 2.1e-99
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+ F+ V G EEAK E+ + V FL+NPQ++ LG K+PKG +L
Sbjct: 292 ITFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILL 333
Score = 40 (19.1 bits), Expect = 2.1e-99, Sum P(3) = 2.1e-99
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 57 SVDSFERNLELAQAQMHIDPANYLPVIYKTEIELSSL 93
SV S +++L + H DP +Y P + E+ LS L
Sbjct: 37 SVQSLQKDL----SPEH-DPLHYEPKVNLKELGLSEL 68
Score = 40 (19.1 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 471 SVDSFERNLELAQAQMHIDPANYLPVIYKTEIELSSL 507
SV S +++L + H DP +Y P + E+ LS L
Sbjct: 37 SVQSLQKDL----SPEH-DPLHYEPKVNLKELGLSEL 68
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 881 (315.2 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 194/446 (43%), Positives = 272/446 (60%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ +APC++FIDE+D+VG KR F H
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IEFPMH 395
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
T+ QLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 396 PYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 456 EILKWYLNKIKFDKSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 513
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 514 FSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHV 573
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ + QLL +M +++GGRV+EE+ FG ITTGA D T+ A V
Sbjct: 574 SLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTK 633
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM+EK+G +++ G++ S T I+ E+R L+ +Y R K +L H
Sbjct: 634 FGMSEKLGVMTYS--DTGKL------SPETQSAIEQEIRILLRESYERAKHILKTHAKEH 685
Query: 960 EKVAERLLKKEILDRNDM-IELLGTR 984
+ +AE LL E LD ++ I L G +
Sbjct: 686 KNLAEALLTYETLDAKEIQIVLEGKK 711
Score = 122 (48.0 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILL 319
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 870 (311.3 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 191/455 (41%), Positives = 276/455 (60%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S K+I ++ V F DV GC+E K E+ E +++LKN ++ +GAK+PKG +L+G PGT
Sbjct: 239 SNKKIIPVENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGT 298
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTL+A+A AGEANVPF+ SGSEF EMFVGVG R+R++F A+KHAPCI+FIDEIDAV
Sbjct: 299 GKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAV 358
Query: 651 GRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQ 710
G KR R+ +S TLNQLLVE+DGF LDKAL+RPGR D+
Sbjct: 359 GSKRSSRD---NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKT 415
Query: 711 IFVPAPDIKGRASIFKVHLKP--LKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIA 768
I VP PDIKGR I K++ L D+D LSR+ T G TGAD+ N+ N AA+
Sbjct: 416 IVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRR----TVGMTGADLNNILNIAAIKC 471
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
+ + ++ M EQA +RVV G+++K+ L EEK AYHE GH + ++ + +DP+
Sbjct: 472 SVEGKKSVDMNSIEQAFDRVVVGLQRKSP-LNEEEKNITAYHEGGHTLVNFYTKGSDPVH 530
Query: 829 KVSIIPRGKGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDD 885
K +I+PRG LG +P ++Y + + + + +GG VSEEI FG+ +TTG D
Sbjct: 531 KATIMPRGMSLGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSD 590
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L+K T A + V ++G+ N+S + ++ SE ID ++ ++ ++Y
Sbjct: 591 LQKATHIAQSLVMNYGVGINEDNISMFLHD------KQNISEEMKIKIDKSIQRILLDSY 644
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIEL 980
R K +L +H + ++A L++ E L +D I+L
Sbjct: 645 NRAKNVLNQHIDELHRIASALVEYETLT-SDEIKL 678
Score = 133 (51.9 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 43 NSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPV--IYKTEIEL-SSLSGILPT 99
N+M +N + +D +RN +HIDP L V I + L + L +
Sbjct: 157 NNMS-SNHSTHKVEYMDK-KRNQHPEMYSLHIDPKKPLKVSVIDSNKKGLWNLLKSTIGF 214
Query: 100 LLIIGRSAEMMXXXXXXXXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFV 159
L+++ + M + S K+I ++ V F DV GC+E K E+ E +
Sbjct: 215 LILVAAGSVYMEGVSQNVQKG----IGVSNKKIIPVENVKVTFADVKGCDEVKQELEEII 270
Query: 160 NFLKNPQQYIDLGAKIPKGAMLT 182
++LKN ++ +GAK+PKG +L+
Sbjct: 271 DYLKNSDKFTKIGAKLPKGILLS 293
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 870 (311.3 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 191/455 (41%), Positives = 276/455 (60%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S K+I ++ V F DV GC+E K E+ E +++LKN ++ +GAK+PKG +L+G PGT
Sbjct: 239 SNKKIIPVENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGT 298
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTL+A+A AGEANVPF+ SGSEF EMFVGVG R+R++F A+KHAPCI+FIDEIDAV
Sbjct: 299 GKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAV 358
Query: 651 GRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQ 710
G KR R+ +S TLNQLLVE+DGF LDKAL+RPGR D+
Sbjct: 359 GSKRSSRD---NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKT 415
Query: 711 IFVPAPDIKGRASIFKVHLKP--LKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIA 768
I VP PDIKGR I K++ L D+D LSR+ T G TGAD+ N+ N AA+
Sbjct: 416 IVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRR----TVGMTGADLNNILNIAAIKC 471
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
+ + ++ M EQA +RVV G+++K+ L EEK AYHE GH + ++ + +DP+
Sbjct: 472 SVEGKKSVDMNSIEQAFDRVVVGLQRKSP-LNEEEKNITAYHEGGHTLVNFYTKGSDPVH 530
Query: 829 KVSIIPRGKGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDD 885
K +I+PRG LG +P ++Y + + + + +GG VSEEI FG+ +TTG D
Sbjct: 531 KATIMPRGMSLGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSD 590
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L+K T A + V ++G+ N+S + ++ SE ID ++ ++ ++Y
Sbjct: 591 LQKATHIAQSLVMNYGVGINEDNISMFLHD------KQNISEEMKIKIDKSIQRILLDSY 644
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIEL 980
R K +L +H + ++A L++ E L +D I+L
Sbjct: 645 NRAKNVLNQHIDELHRIASALVEYETLT-SDEIKL 678
Score = 133 (51.9 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 43 NSMDGANFLWFNIGSVDSFERNLELAQAQMHIDPANYLPV--IYKTEIEL-SSLSGILPT 99
N+M +N + +D +RN +HIDP L V I + L + L +
Sbjct: 157 NNMS-SNHSTHKVEYMDK-KRNQHPEMYSLHIDPKKPLKVSVIDSNKKGLWNLLKSTIGF 214
Query: 100 LLIIGRSAEMMXXXXXXXXXXXXXXVMESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFV 159
L+++ + M + S K+I ++ V F DV GC+E K E+ E +
Sbjct: 215 LILVAAGSVYMEGVSQNVQKG----IGVSNKKIIPVENVKVTFADVKGCDEVKQELEEII 270
Query: 160 NFLKNPQQYIDLGAKIPKGAMLT 182
++LKN ++ +GAK+PKG +L+
Sbjct: 271 DYLKNSDKFTKIGAKLPKGILLS 293
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 878 (314.1 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 195/448 (43%), Positives = 276/448 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ +APC++FIDE+D+VG KR +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 397
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 398 SRQ--TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 456 EILKWYLNKIKFDQSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 513
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 514 FSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHV 573
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTG--AEDDLKKVTQSAYAQV 897
LP +++ ++ QLL +M +++GGRV+EE+ FG ITTG A D T+ A V
Sbjct: 574 SLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGSDHITTGYCASSDFDNATKIAKRMV 633
Query: 898 AHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKA 957
FGM+EK+G +++ G++ S T I+ E+R L+ ++Y R K +L H
Sbjct: 634 TKFGMSEKLGVMTYS--DTGKL------SPETQSAIEQEIRILLRDSYERAKHILKTHAK 685
Query: 958 SVEKVAERLLKKEILDRNDM-IELLGTR 984
+ +AE LL E LD ++ I L G +
Sbjct: 686 EHKNLAEALLTYETLDAKEIQIVLEGKK 713
Score = 122 (48.0 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILL 319
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 878 (314.1 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 193/446 (43%), Positives = 273/446 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNP ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 275 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 334
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R +F A+ +APC++FIDE+D+VG KR +
Sbjct: 335 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 394
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD++GR
Sbjct: 395 SRQ--TINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRT 452
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 453 EILKWYLNKIKYDQSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELE 510
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+ RG LG+
Sbjct: 511 FSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHV 570
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M + +GGR +EE+ FG ITTGA D T+ A V
Sbjct: 571 SLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVTR 630
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM+EK+G +++ G++ S T I+ EVR+L+ ++Y R K +L H
Sbjct: 631 FGMSEKLGVMTYT--DTGKV------SPETQSAIEQEVRTLLRDSYERAKNILKTHAKEH 682
Query: 960 EKVAERLLKKEILDRNDM-IELLGTR 984
+ +AE LLK E LD ++ I L G +
Sbjct: 683 KNLAEALLKYETLDAKEIQIVLEGKK 708
Score = 117 (46.2 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNP ++ LG K+PKG +L
Sbjct: 275 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILL 316
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 878 (314.1 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 193/446 (43%), Positives = 273/446 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNP ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 280 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 339
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R +F A+ +APC++FIDE+D+VG KR +
Sbjct: 340 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 399
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD++GR
Sbjct: 400 SRQ--TINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRT 457
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 458 EILKWYLNKIKYDQSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELE 515
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+ RG LG+
Sbjct: 516 FSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHV 575
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M + +GGR +EE+ FG ITTGA D T+ A V
Sbjct: 576 SLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVTR 635
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
FGM+EK+G +++ G++ S T I+ EVR+L+ ++Y R K +L H
Sbjct: 636 FGMSEKLGVMTYT--DTGKV------SPETQSAIEQEVRTLLRDSYERAKNILKTHAKEH 687
Query: 960 EKVAERLLKKEILDRNDM-IELLGTR 984
+ +AE LLK E LD ++ I L G +
Sbjct: 688 KNLAEALLKYETLDAKEIQIVLEGKK 713
Score = 117 (46.2 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNP ++ LG K+PKG +L
Sbjct: 280 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILL 321
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 842 (301.5 bits), Expect = 6.1e-95, Sum P(2) = 6.1e-95
Identities = 181/404 (44%), Positives = 254/404 (62%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L GPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A+VPF SGSEF EMFVGVG SR+R++F A+ +APC++FIDE+D+VG KR +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 397
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
S Q T+NQLL EMDGF + LD AL+RPGRFD Q+ VP PD+KGR
Sbjct: 398 SRQ--TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K +L +K D D +A T GF+GA++ N+ N+AAL AA D + MK E
Sbjct: 456 EILKWYLNKIKFDQSVDP--EIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 513
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYA 842
+ ++++ G E+++ + + K AYHE+GHA+ ++ + A P+ K +I+PRG LG+
Sbjct: 514 FSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHV 573
Query: 843 QYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAH 899
LP +++ ++ QLL +M +++GGRV+EE+ FG ITTGA D T+ A V
Sbjct: 574 SLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTK 633
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISN 943
FGM+EK+G +++ G++ S T I+ E+R L+ N
Sbjct: 634 FGMSEKLGVMTYS--DTGKL------SPETQSAIEQEIRILLRN 669
Score = 122 (48.0 bits), Expect = 6.1e-95, Sum P(2) = 6.1e-95
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
V F+ V G EEAK E+ E V FLKNPQ++ LG K+PKG +L
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILL 319
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 204/451 (45%), Positives = 284/451 (62%)
Query: 536 INSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLL 595
++ +I V F+DV GC+EAK E+ E V FLK+P+++ +LG K+PKG +L GPPGTGKTLL
Sbjct: 290 VDPEEINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLL 349
Query: 596 AKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG 655
A+A AGEA VPF +G EF E+ VG G RVRD+F A+ APC++FIDEID+VG KR
Sbjct: 350 ARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKR- 408
Query: 656 GRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPA 715
N H T+NQLL EMDGF D LD+ALLRPGRFD ++ V
Sbjct: 409 -TNSVLHPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVST 467
Query: 716 PDIKGRASIFKVHL-KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHT 774
PD GR I ++L K L ++D D L+R T GFTGAD+ N+ N+AAL AA D
Sbjct: 468 PDFTGRKEILSLYLTKILHDEIDLDMLARG----TSGFTGADLENMINQAALRAAIDGAE 523
Query: 775 TIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTV-AYHEAGHAVAGWFLRYADPLLKVSII 833
T+ MKH E A ++V+ G E+K L EE T+ AYHE GHA+ ++ + + PL KV+I+
Sbjct: 524 TVSMKHLETARDKVLMGPERKAR-LPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTIM 582
Query: 834 PRGKGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVT 890
PRG LG+ Y+P +E+Y +K QLL M +GGR +EE+ FG +IT+GA DLK+ T
Sbjct: 583 PRGPSLGHTAYIPEKERYHVTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQAT 642
Query: 891 QSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKA 950
A V +GM++KVG + + + G + +T + +D E++ ++S++Y R KA
Sbjct: 643 SIATHMVRDWGMSDKVGLRTIEASK-G-LGTGDTLGPNTIEAVDAEIKRILSDSYERAKA 700
Query: 951 LLIEHKASVEKVAERLLKKEILDRNDMIELL 981
+L +H + +AE LLK E LD +D+ +L
Sbjct: 701 ILRKHTREHKALAEALLKYETLDADDIKAIL 731
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 133 INSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
++ +I V F+DV GC+EAK E+ E V FLK+P+++ +LG K+PKG +L
Sbjct: 290 VDPEEINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLL 338
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 843 (301.8 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 180/443 (40%), Positives = 275/443 (62%)
Query: 545 FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN 604
F DV G +E K E+ E V++L +P +Y +GAK+PKG +L+G PGTGKTLLA+A AGEA
Sbjct: 299 FDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAGEAG 358
Query: 605 VPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSE 664
V F+ +GS F E +VGVG RVR++F+ AR+ PCI+FIDEIDAVG+ R N H+E
Sbjct: 359 VSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSR---NTAHHNE 415
Query: 665 QENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASI 724
TL QLL EMDGF + LD ALLRPGRFDR I VP PD+KGR+ I
Sbjct: 416 ---TLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEI 472
Query: 725 FKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQA 784
+LK +K ++ + +A TPGFTGAD++N+ N AA+ A ++ TI +K + A
Sbjct: 473 IDHYLKKVKHTVEVK--ADTIARATPGFTGADLSNLINTAAIKAVQNGKETISIKQIDDA 530
Query: 785 IERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGYAQY 844
+ ++ G + V+ E ++ AYHEAGHA+ ADP+ K +I+ RG+ LG
Sbjct: 531 RDDILMGRARLNAVMSEEARRNTAYHEAGHALVAAMTEAADPIHKATIVQRGQALGMVSQ 590
Query: 845 LPREQYL-YSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDLKKVTQSAYAQVAHFG 901
LP ++ Y+++Q++ R+ + L GR +EEIFFG +T+GA D ++ + A++ + +G
Sbjct: 591 LPEMDHVQYTRKQMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQASSLAFSMITKWG 650
Query: 902 MNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEK 961
M++KVG + +K S ++I++EV+ L+ Y +K L+I+++ ++EK
Sbjct: 651 MSDKVGFIYHK---------DKT-SPEVQKIIEDEVKDLLDKQYQYSKELIIKNRDNMEK 700
Query: 962 VAERLLKKEILDRNDMIELLGTR 984
+ +LL+KE L +++++L +
Sbjct: 701 LVGQLLEKETLTGEEILKILNPK 723
Score = 105 (42.0 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 142 FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
F DV G +E K E+ E V++L +P +Y +GAK+PKG +L+
Sbjct: 299 FDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLS 339
Score = 52 (23.4 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 223 ATLPKSNFPPTTVESVLHQWRIILSENVPKGFE-KF--YPDKNKKSAEKP 269
A L + PP T + + SE KGF +F +P+ N+K +KP
Sbjct: 181 ANLGMTKLPPPTKKMTKAAREALGSEEAMKGFFLRFNHFPEVNEKIHQKP 230
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 846 (302.9 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
Identities = 188/458 (41%), Positives = 275/458 (60%)
Query: 545 FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN 604
F DV G EEAK E+ + V+FL+NP++Y +PKG +L GPPGTGKTLLAK+ AGEA
Sbjct: 163 FADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKSLAGEAR 222
Query: 605 VPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR-NFGGHS 663
V FIT++GSEF E FVGVG RVR++F ARK++PCI+FIDEID+VG R R N+ H
Sbjct: 223 VSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRTKRVNY--HP 280
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
+ LNQLLVE+DGF D LD AL+R GRFDR I VP PD K R S
Sbjct: 281 SE--ALNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLPDGKARKS 338
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I +LK P+ + ++ + +A TPGF+GAD+ N+ N AAL + I M+
Sbjct: 339 IIDHYLKDKPIASHVN----TTTIAQSTPGFSGADLFNLVNWAALETTKHNLPEITMEQL 394
Query: 782 EQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRGKGLGY 841
E A E ++ G E+ + ++ E +K A+HEAGHA+ A + K +I+PRG LG
Sbjct: 395 ENAKENLMMGKERHSLLMSDEARKICAFHEAGHALVAIMTPGARTVHKATIMPRGDALGL 454
Query: 842 AQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDDLKKVTQSAYAQVAH 899
L +E+ +K+QL+ +M + +GGR +EE+ G+ I+ GA D++K T A A V++
Sbjct: 455 VSMLEKEETFVTKKQLIAQMDVAMGGRAAEELILGKENISQGASSDIQKATSIAKAMVSN 514
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASV 959
+GM+EKVG + EK S + +L+D+EV+SL+ ++Y R LL ++
Sbjct: 515 YGMSEKVGQIYIQS--------EKKLSSAQRELVDSEVKSLLDSSYIRATQLLKKYSKEH 566
Query: 960 EKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFVE 997
+A LL+ E L +++ +++ ++ K E+ ++
Sbjct: 567 HLIANALLEYETLSLDEIKDIIASKSLANKKNREQLIK 604
Score = 101 (40.6 bits), Expect = 3.8e-93, Sum P(2) = 3.8e-93
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 142 FKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
F DV G EEAK E+ + V+FL+NP++Y +PKG +L
Sbjct: 163 FADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILL 202
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 201/448 (44%), Positives = 280/448 (62%)
Query: 538 SSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAK 597
S D +F DV G +EAK E+ E V++L++P+++ LG K+PKG +L GPPGTGKT+LA+
Sbjct: 219 SMDSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLAR 278
Query: 598 ATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR 657
A AGEA VPF + SGSEF EMFVGVG RVRD+FS A+K +PCI+FIDEIDA+G G R
Sbjct: 279 AIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIG---GSR 335
Query: 658 NFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPD 717
N + TLNQ+LVE+DGF + LDKAL+RPGRFDR I VP PD
Sbjct: 336 NPKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPD 395
Query: 718 IKGRASIFKVHL-KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTI 776
++GR I + H+ K LK + D D + +A TPGF+GAD+AN+ N AAL AA D +
Sbjct: 396 VEGRRQILESHMSKVLKAE-DVDLMI--IARGTPGFSGADLANLVNVAALKAAMDGSKDV 452
Query: 777 VMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPRG 836
M E A +R++ G E+K+ V+ E +K A+HE GHA+ A P+ K +I+PRG
Sbjct: 453 TMSDLEFAKDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALPVHKATIVPRG 512
Query: 837 KGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDDLKKVTQSA 893
LG LP +++ S++Q+L R+ + +GGRV+EE+ FG +T+GA DL++ T+ A
Sbjct: 513 MALGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLA 572
Query: 894 YAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALLI 953
A V FGM+++VG V+ + G K S T LI++EV+ L+ AY K +L
Sbjct: 573 RAMVTKFGMSKEVGLVAHNYDDNG-----KSMSTETRLLIESEVKQLLEKAYNNAKTILT 627
Query: 954 EHKASVEKVAERLLKKEILDRNDMIELL 981
+ + +A LL+ E L + ELL
Sbjct: 628 VYNKELHALANALLQHETLSGKQIKELL 655
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 205/467 (43%), Positives = 282/467 (60%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S + +N D+ V F DV G +EAK+E+ E V++LK+P++Y LG ++PKG +L GPPGT
Sbjct: 233 SNPQEVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGT 292
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTLLA+A AGEA VPF +GSEF E+ VG G RVRD+F A+ APCI+FIDEID+V
Sbjct: 293 GKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV 352
Query: 651 GRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQ 710
G KR + ++ Q T+NQLL EMDGF D LDKALLRPGRFD +
Sbjct: 353 GSKRVSNSIHPYANQ--TINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVR 410
Query: 711 IFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
+ VP PD+ GR IF +L + D + LA + GFTGADI N+ N+AAL AA
Sbjct: 411 VTVPKPDLAGRVDIFNFYLSKIVHSGGIDP--KVLAKGSTGFTGADIENMVNQAALKAAT 468
Query: 771 DLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEE-KKTVAYHEAGHAVAGWFLRYADPLLK 829
D + M + ++A +RV+ G + + EE + AYHEAGH + + + A PL K
Sbjct: 469 DNAVEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHK 528
Query: 830 VSIIPRGKGLGYAQYLP-REQYLYSKEQLLDRMCMTLGGRVSEEIFFG--RITTGAEDDL 886
V+IIPRG+ LG+ LP ++ Y +K Q+L + + +GGRV+EE+ FG ++TTGA DDL
Sbjct: 529 VTIIPRGQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDL 588
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEK--PYSESTAQLIDNEVRSLISNA 944
K TQ A V FGM++KVG F Q E L K + TA+LID E+ ++ +
Sbjct: 589 SKATQLAVQMVKVFGMSDKVGLRDFTA-QDNESALVKVSDLAPQTAELIDAEINRVLQES 647
Query: 945 YTRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLG----TRPFP 987
Y R K +L K + +AE LL+ E L +++ ++ RP P
Sbjct: 648 YKRAKVILETKKKEHQLLAEALLEYETLSADEVKRVISGQKIKRPTP 694
Score = 135 (52.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 128 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
S + +N D+ V F DV G +EAK+E+ E V++LK+P++Y LG ++PKG +L
Sbjct: 233 SNPQEVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLL 286
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 895 (320.1 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 194/478 (40%), Positives = 295/478 (61%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
E K ++ + V+F DV GC+EA+ E+ E V+FLK+P +Y LG K+PKG +LTGPPG
Sbjct: 265 EVADKSVDVAKTNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPG 324
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+ATAGEA V F +SGSEF E++VGVG R+RD+F+ AR AP I+FIDE+DA
Sbjct: 325 TGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDA 384
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
+G KR ++ +++Q TLNQLLVE+DGF + LDKAL RPGRFD+
Sbjct: 385 IGGKRNPKD-QAYAKQ--TLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDK 441
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAA 769
+ V PD++GRA I K H+K + T D D + +A TPG +GA++AN+ N+AA+ A
Sbjct: 442 VVNVDLPDVRGRADILKHHMKKI-TLADNVDPTI-IARGTPGLSGAELANLVNQAAVYAC 499
Query: 770 RDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLK 829
+ ++ M HFE A ++++ G E+KT VL +K A+HEAGHA+ + A PL K
Sbjct: 500 QKNAVSVDMSHFEWAKDKILMGAERKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYK 559
Query: 830 VSIIPRGKGLGYAQYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDDL 886
+I+PRG+ LG LP ++ +K + R+ + +GG+++EE+ +G+ T+G DL
Sbjct: 560 ATILPRGRALGITFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDL 619
Query: 887 KKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYT 946
+ T +A A V +GM++ VG V+ + + E +S + DNEV L+ ++
Sbjct: 620 QSATGTARAMVTQYGMSDDVGPVN--LSENWES-----WSNKIRDIADNEVIELLKDSEE 672
Query: 947 RTKALLIEHKASVEKVAERLLKKEILDRNDMIELL-GTRPFPEKSTYEEFVEGTGSFE 1003
R + LL + + ++A+ L++ E LD +++ ++ G + K++ VEG S E
Sbjct: 673 RARRLLTKKNVELHRLAQGLIEYETLDAHEIEQVCKGEKLDKLKTSTNTVVEGPDSDE 730
Score = 142 (55.0 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
E K ++ + V+F DV GC+EA+ E+ E V+FLK+P +Y LG K+PKG +LT
Sbjct: 265 EVADKSVDVAKTNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLT 320
Score = 43 (20.2 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 252 KGFEKFYPDKNKKSAEKPKEEGKPSDST 279
K F +FY +KN S E P + K +DS+
Sbjct: 42 KKFYRFYSEKN--SGEMPPK--KEADSS 65
Score = 43 (20.2 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 320 KGFEKFYPDKNKKSAEKPKEEGKPSDST 347
K F +FY +KN S E P + K +DS+
Sbjct: 42 KKFYRFYSEKN--SGEMPPK--KEADSS 65
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 194/471 (41%), Positives = 293/471 (62%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
E++ K ++ S VRFKDV GC+EA+ E+ E V+FLK+P ++ LG K+PKG +LTGPPG
Sbjct: 209 ETSDKSVDVSQSTVRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVLLTGPPG 268
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
TGKTLLA+ATAGEA VPF +SGSEF E++VGVG R+R++FS AR AP I+FIDE+DA
Sbjct: 269 TGKTLLARATAGEAGVPFFFMSGSEFDELYVGVGAKRIRELFSQARDKAPAIIFIDELDA 328
Query: 650 VGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDR 709
+G KR ++ +++Q TLNQLLVE+DGF + LDKAL RPGRFD+
Sbjct: 329 IGGKRNPKD-QAYAKQ--TLNQLLVELDGFSQTEGIIIIGATNFPESLDKALTRPGRFDK 385
Query: 710 QIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAAL-TPGFTGADIANVCNEAALIA 768
++ V PD++GR I K H++ ++T DD+ + A TPG +GA++ N+ N+AA+ A
Sbjct: 386 EVIVDLPDVRGRIDILKHHMQNVET---ADDVDPSIIARGTPGLSGAELMNLVNQAAVHA 442
Query: 769 ARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLL 828
++ + M HFE A ++++ G KK V+ E + AYHEAGHA+ F + A PL
Sbjct: 443 SQLSAPAVDMNHFEWAKDKILMGAAKKKMVITEESRINTAYHEAGHAIMAMFSKGATPLY 502
Query: 829 KVSIIPRGKGLGYAQYLPR-EQYLYSKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAEDD 885
K +I+PRG+ LG LP ++ SK++ R+ + +GG+++EE+ G+ +T+G D
Sbjct: 503 KATILPRGRALGITFQLPEMDKVDMSKQECFARLDVCMGGKIAEEMINGKENVTSGCASD 562
Query: 886 LKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAY 945
L T A A V +GM++K+G V + E +S + DNEVR + ++
Sbjct: 563 LSNATSVARAMVTSYGMSDKIGPVR--LSDDWES-----WSPQIRNMADNEVRDYLLDSE 615
Query: 946 TRTKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRPFPEKSTYEEFV 996
RT+ LL + + ++++AE LL+ E L + +M +++ P + T V
Sbjct: 616 KRTRKLLYDKRLELKRLAEGLLEYETLTKEEMEKVVKGEPINKAKTMSNTV 666
Score = 153 (58.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 127 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLT 182
E++ K ++ S VRFKDV GC+EA+ E+ E V+FLK+P ++ LG K+PKG +LT
Sbjct: 209 ETSDKSVDVSQSTVRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVLLT 264
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 648 (233.2 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 164/459 (35%), Positives = 254/459 (55%)
Query: 541 IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATA 600
+ V+F DVAG + ++E+ E V F + + Y G KIP G +L GPPG GKTLLAKA A
Sbjct: 405 VDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVA 464
Query: 601 GEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG 660
GEA V F ++S S+F+E++VGVG SRVR ++ AR++AP ++FIDE+DAVGR+RG
Sbjct: 465 GEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGS 524
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G E++ TLNQLLV +DGF D+LD AL+RPGRFDR+IF+P P + G
Sbjct: 525 GGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 584
Query: 721 RASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVM 778
R I +VH KP+ DLD +A++T G GA++AN+ AA+ RD T +
Sbjct: 585 RMEILQVHARKKPMAEDLDY----MAVASMTDGMVGAELANIVEIAAINMMRDGRTELTT 640
Query: 779 KHFEQAIERVVAGM-EKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-G 836
QA + GM ++K L E + VA +EA AV + ++I PR G
Sbjct: 641 DDLLQAAQIEERGMLDRKDRSL--ETWRQVAINEAAMAVVAVNFPDMKNIEFLTINPRAG 698
Query: 837 KGLGYAQ----YLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDLKKVTQS 892
+ LGY + ++ ++ + S++ +LD + + L R ++E+++G ED L +
Sbjct: 699 RELGYVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYG------EDQLSTIWAE 752
Query: 893 AYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNEVRSLISNAYTRTKALL 952
+ +G +S D G L + ID E +++ Y R K +L
Sbjct: 753 TSDNARSAARSLVLGGLS-DKHH-G---LNNFWVADRINDIDVEALRILNMCYERAKEIL 807
Query: 953 IEHKASVEKVAERLLKKEILDRND---MIELLGT-RPFP 987
++ +++V E+L++K+ L + + ++EL G+ +P P
Sbjct: 808 GRNRTLMDEVVEKLVQKKSLTKQEFFTLVELYGSSKPMP 846
Score = 84 (34.6 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 138 IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+ V+F DVAG + ++E+ E V F + + Y G KIP G +L
Sbjct: 405 VDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILL 448
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 663 (238.4 bits), Expect = 1.3e-66, Sum P(2) = 1.3e-66
Identities = 155/372 (41%), Positives = 216/372 (58%)
Query: 530 ESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 589
+S A+ GV+F DVAG +EA E+ E V +LKNP + +G K P G +L GPPG
Sbjct: 414 QSKAEARVDGSTGVKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPG 473
Query: 590 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDA 649
GKTL+AKA AGEA VPF ++GSEF+E+ VGVG +R+RD+F A+ + P ++FIDEIDA
Sbjct: 474 CGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDA 533
Query: 650 VGRKRGG---RNF-----GGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKAL 701
+ +R G N E+E TLNQLL+E+DGF D+LD AL
Sbjct: 534 LATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPAL 593
Query: 702 LRPGRFDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVC 761
LRPGRFDR+I V P+ KGR I K+H +K D DLS A+ PG++GA +A +
Sbjct: 594 LRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMS-DSVDLS-SYASNLPGWSGAKLAQLV 651
Query: 762 NEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFL 821
EAAL+A R H +I+ + A++R+ G + L + + A E G A+ L
Sbjct: 652 QEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLL 711
Query: 822 -RYADPLL----KVSIIPRGKGLGYAQY--LPREQYLYSK-EQLLDRMCMTLGGRVSEEI 873
RY + + +VSIIPRG+ L + L E Y++ + QLL R+ + LGGR +EE+
Sbjct: 712 LRYENAKIERCDRVSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLHRLQVLLGGRAAEEV 771
Query: 874 FFGRITTGAEDD 885
+G T+ A D
Sbjct: 772 IYGSDTSKASVD 783
Score = 54 (24.1 bits), Expect = 1.3e-66, Sum P(2) = 1.3e-66
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 920 VLEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLL-KKEI 971
++E P + + + + LIS Y +T +LL +++ ++ K + LL +KEI
Sbjct: 837 LVEPPVNFNMDDEVAHRSEELISQMYNKTVSLLRQNQTALLKTVKVLLNQKEI 889
>RGD|1305259 [details] [associations]
symbol:Afg3l2 "AFG3 ATPase family member 3-like 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528
"neuromuscular junction development" evidence=ISO] [GO:0008053
"mitochondrial fusion" evidence=ISO] [GO:0016265 "death"
evidence=ISO] [GO:0021675 "nerve development" evidence=ISO]
[GO:0034982 "mitochondrial protein processing" evidence=ISO]
[GO:0040014 "regulation of multicellular organism growth"
evidence=ISO] [GO:0042407 "cristae formation" evidence=ISO]
[GO:0042552 "myelination" evidence=ISO] [GO:0048747 "muscle fiber
development" evidence=ISO] [GO:0060013 "righting reflex"
evidence=ISO] InterPro:IPR000642 Pfam:PF01434 RGD:1305259
GO:GO:0005524 GO:GO:0005743 GO:GO:0007528 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0042552 GO:GO:0007409
eggNOG:COG0465 HOGENOM:HOG000217277 OrthoDB:EOG4SBDXC GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 MEROPS:M41.007 IPI:IPI00192903 UniGene:Rn.8386
EMBL:BC091419 ProteinModelPortal:Q5BJM6 STRING:Q5BJM6 PRIDE:Q5BJM6
UCSC:RGD:1305259 HOVERGEN:HBG054965 InParanoid:Q5BJM6
ArrayExpress:Q5BJM6 Genevestigator:Q5BJM6 Uniprot:Q5BJM6
Length = 179
Score = 645 (232.1 bits), Expect = 3.4e-63, P = 3.4e-63
Identities = 123/156 (78%), Positives = 140/156 (89%)
Query: 861 MCMTLGGRVSEEIFFGRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMV 920
MCMTLGGRVSEEIFFGRITTGA+DDL+KVTQSAYAQ+ FGMNEKVG +SFD+P+ G+MV
Sbjct: 1 MCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMV 60
Query: 921 LEKPYSESTAQLIDNEVRSLISNAYTRTKALLIEHKASVEKVAERLLKKEILDRNDMIEL 980
LEKPYSE+TA++ID+EVR LIS AY RT ALL E KA VEKVA LL+KE+LD+NDM+EL
Sbjct: 61 LEKPYSEATARMIDDEVRILISEAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVEL 120
Query: 981 LGTRPFPEKSTYEEFVEGTGSFEEDTSLPEGLKDWN 1016
LG RPF EKSTYEEFVEGTGS +EDTSLPEGL+DWN
Sbjct: 121 LGPRPFTEKSTYEEFVEGTGSLDEDTSLPEGLQDWN 156
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 617 (222.3 bits), Expect = 6.6e-60, P = 6.6e-60
Identities = 129/265 (48%), Positives = 173/265 (65%)
Query: 531 STAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGT 590
S AK S + V F DV G + AK E++E V+ L+ Y LGA++P+G +L GPPGT
Sbjct: 319 SPAKKRRSKNPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGT 378
Query: 591 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAV 650
GKTLLA+A AGEA VPF +VS SEF+E+FVG G +R+RD+F+ ARK++P I+FIDE+DAV
Sbjct: 379 GKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAV 438
Query: 651 GRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQ 710
G KRG R+F + E++ TLNQLL EMDGF + LD AL RPGRF R+
Sbjct: 439 GGKRG-RSF--NDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRK 495
Query: 711 IFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
+ V PD +GR I +HL+ + + D + +A+LTPGF GAD+AN+ NEAAL+AAR
Sbjct: 496 VLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAAR 555
Query: 771 DLHTTIVMKHFEQAIERVVAGMEKK 795
+ + +AIER G+ K
Sbjct: 556 RGGEAVAREDIMEAIERAKFGINDK 580
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 585 (211.0 bits), Expect = 2.4e-58, Sum P(2) = 2.4e-58
Identities = 120/279 (43%), Positives = 178/279 (63%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
+ F DVAG +E K+E+ E V+FL+NP++Y + G K+PKG ++ GPPG GKTL+AKA AGE
Sbjct: 149 ITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGE 208
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
A VPF SGS F+E++VG+G RVR++FS A+ AP I+FIDEIDAVG+ RG + +
Sbjct: 209 AGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMS---N 265
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E+++TLNQLL +MDGF +++D ALLR GRFDR+IF+ PD K R
Sbjct: 266 VERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRL 325
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I ++++K +++ + K+A + GF+GA + + NEAA+ A R + F
Sbjct: 326 KILEIYMKDKNNNINLN----KIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFY 381
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFL 821
+ +V+ G +KK EEKK A ++A A++ ++L
Sbjct: 382 AVLNKVLLG-KKKILSFNNEEKKIQATYQAAKALSAYYL 419
Score = 273 (101.2 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
Identities = 71/245 (28%), Positives = 126/245 (51%)
Query: 647 IDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGR 706
ID + R + E+++TLNQLL +MDGF +++D ALLR GR
Sbjct: 250 IDEIDAVGKARGEMSNVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGR 309
Query: 707 FDRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAAL 766
FDR+IF+ PD K R I ++++K +++ + K+A + GF+GA + + NEAA+
Sbjct: 310 FDRRIFLSLPDFKDRLKILEIYMKDKNNNINLN----KIAKASVGFSGAGLETLVNEAAI 365
Query: 767 IAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADP 826
A R + F + +V+ G +KK EEKK A ++A A++ ++L
Sbjct: 366 NALRRNSALVEESDFYAVLNKVLLG-KKKILSFNNEEKKIQATYQAAKALSAYYLDIG-- 422
Query: 827 LLKVSIIPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITTGAEDDL 886
K+++I + +Y E + SK +L++R+ + L G + ++ + T ++DD
Sbjct: 423 FEKITLIEDR----FKEY---EHNIRSKSELINRIKVYLAGSRAMKLIYNESYTNSQDDF 475
Query: 887 KKVTQ 891
K+ +
Sbjct: 476 LKIKE 480
Score = 122 (48.0 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAML 181
+ F DVAG +E K+E+ E V+FL+NP++Y + G K+PKG ++
Sbjct: 149 ITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLM 190
Score = 42 (19.8 bits), Expect = 2.4e-58, Sum P(2) = 2.4e-58
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 956 KASVEKVAERLLKKEILDRNDMIELL 981
K + K++E LL+KE ++ +D+ +++
Sbjct: 511 KDKILKLSELLLEKEKIEYDDVKDIM 536
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 612 (220.5 bits), Expect = 6.1e-58, P = 6.1e-58
Identities = 171/482 (35%), Positives = 258/482 (53%)
Query: 530 ESTAKLINSSD-IGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPP 588
+S AK I++ + GV F D AG E K E+ E V LKN +++ + G PKG +L GPP
Sbjct: 299 KSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 358
Query: 589 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEID 648
GTGKTLLAKA AGEA +PF +G++F+EMFVGV SRV+D+F+ +R +AP I+FIDEID
Sbjct: 359 GTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEID 418
Query: 649 AVGRKRGGRNFGGH-SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXX-DVLDKALLRPGR 706
A+G KRGG + GG +E+E L Q+L EMDGF D+LD ALLR GR
Sbjct: 419 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGR 478
Query: 707 FDRQIFVPAPDIKGRASIFKVHL--KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEA 764
FD+ I V P GR +I KVH K +++ ++++L +++A T FTGA++ NV NEA
Sbjct: 479 FDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEA 538
Query: 765 ALIAARDLHTTIVMKHFEQAIER----VVAGMEKKTNVLQPEEKKT-VAYHEAGHAVAGW 819
++ AR I + +A++R G E T V PEE K +AY EA AV
Sbjct: 539 GILTARKDLDYIGREELLEALKRQKGTFETGQEDSTEV--PEELKLRLAYREAAVAVLAC 596
Query: 820 FL--RYADPLLKVSI--IPRGKGLGYAQYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFF 875
+L +Y P+ + I I + Y++ R K ++ + RV EE F
Sbjct: 597 YLPDQYR-PISETDINSIRSQPNMRYSETSGR--VFARKSDYVNSIIRACAPRVVEEEMF 653
Query: 876 GRITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDN 935
G ++L ++ + + + F + Q G K Y + L+ N
Sbjct: 654 GI------ENLCWISAKSTLEASQ--------RAEFLILQTGMTAFGKAYYRNQRDLVPN 699
Query: 936 EVRSL--ISNAYTR-----TKALLIEHKASVEKVAERLLKKEILDRNDMIELLGTRP-FP 987
V L + + Y R ++L E+++++E++ + LL+K + +++ + T P P
Sbjct: 700 LVPKLEALRDEYMRFAVEKCSSILQEYQSALEEITDVLLEKGEIKADEIWNIYNTAPRIP 759
Query: 988 EK 989
+K
Sbjct: 760 QK 761
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 588 (212.0 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 151/445 (33%), Positives = 233/445 (52%)
Query: 544 RFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ DV G + AK +++ + ++K P + + KIP G + GPPGTGKT LAKA AGE
Sbjct: 866 KLDDVIGLQRAKNRLLDVIEWMKFPDKLQNFDVKIPTGFLFAGPPGTGKTFLAKAVAGEC 925
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+PF +VS SE +G ++ +FS+ARK+AP I+FIDEIDA+ +R + G
Sbjct: 926 GLPFFSVSASELSSTIIGGSSEKIMALFSVARKYAPSIVFIDEIDAIASQRSEDSQGNSR 985
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXX-DVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E+ +N LL EMDGF +LDKA+LRPGRFD IF P+ + R
Sbjct: 986 ERNAIVNTLLTEMDGFSSSESPVFVMAATNYPQLLDKAILRPGRFDETIFCDLPNSEART 1045
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
F+ + + DL+ L + + G + A+I V EA + A + ++H +
Sbjct: 1046 IFFEKFAQKQNLQWQQSDLTA-LVSSSQGMSSAEIDQVLREA-IYQAVGTEKPLTIEHIK 1103
Query: 783 QAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSII-PRGKGLGY 841
Q I RVV G + L EEK+ A+HEA H + + L + + ++ + I PR + LG+
Sbjct: 1104 QTIVRVVYGSPSENIKLGKEEKRRTAFHEAAHLLT-YKLLFPNQIIDFATIEPRNQSLGF 1162
Query: 842 AQYLPREQY-LYSKEQLLDRMCMTLGGRVSEEIFFGR---ITTGAEDDLKKVTQSAYAQV 897
E+Y YSK ++++++ + L GRV+E++ I+TGA +D++K TQ A +
Sbjct: 1163 VATRASEEYESYSKTRVMNKLQVLLAGRVAEKLCTNNADEISTGASNDIEKATQLAMHAI 1222
Query: 898 AHFGMNEKVGNVSFDMPQPGEMVLEK-PYSESTAQLIDNEVRSLISNAYTRTKALLIEHK 956
G+ E VG V+ +L K SE A+ V+ + A + LL ++
Sbjct: 1223 YDGGIEESVGPVNVG-------ILTKFEESELLAKA-QKAVQQWLITAEQSVEKLLNDNC 1274
Query: 957 ASVEKVAERLLKKEILDRNDMIELL 981
+E VA LL+KE L +D I L
Sbjct: 1275 HQLELVANTLLEKESL-LSDEINTL 1298
Score = 61 (26.5 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 141 RFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKG 178
+ DV G + AK +++ + ++K P + + KIP G
Sbjct: 866 KLDDVIGLQRAKNRLLDVIEWMKFPDKLQNFDVKIPTG 903
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 599 (215.9 bits), Expect = 3.4e-55, P = 3.4e-55
Identities = 155/452 (34%), Positives = 236/452 (52%)
Query: 529 MESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPP 588
++ T+ L N S DV G E AK ++E V++LK P++ ++ G KIP G + +GPP
Sbjct: 835 LQETS-LFNHSLPDNSLDDVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPP 893
Query: 589 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEID 648
GTGKTLLAKA AGE +PF +V+ SE G ++ +F+ ARK+AP I+FIDEID
Sbjct: 894 GTGKTLLAKAVAGECELPFFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEID 953
Query: 649 AVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXX-DVLDKALLRPGRF 707
A+ +R + G ++ T+N LL EMDGF +LD A+ RPGRF
Sbjct: 954 AIAAQRTDNSDGSSRDKNLTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRF 1013
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
D I+ P+ R FK K + +L ++L + G + A+I V E+
Sbjct: 1014 DETIYCDLPNKNARLIFFKRFASKHKLNWQETEL-QQLVSSAQGMSSAEIDQVLRESIYQ 1072
Query: 768 AARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPL 827
A + + + +H +Q + R+V G L EEK+ AYHEA H +A L P+
Sbjct: 1073 AVGE-NQQLTTEHIKQTMIRIVYGAPSDHIFLGAEEKRRTAYHEAAHLLAYKLLFPKQPI 1131
Query: 828 LKVSIIPRGKGLGYAQYLPREQY-LYSKEQLLDRMCMTLGGRVSEEIFFG---RITTGAE 883
++I PR + LG+ E+Y YSK +++ ++ + L GRV+E++ G ++TGA
Sbjct: 1132 DFITIEPRNQALGFVATRASEEYESYSKRRVMHKLQVLLAGRVAEKLCTGDCEEVSTGAS 1191
Query: 884 DDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNE---VRSL 940
+D++K TQ A + G+ VG V+ M L K + ES L+ N V+
Sbjct: 1192 NDIEKATQLAMHAIYEGGIEPTVGPVNIAM-------LTK-FEES--DLLANAQQAVKQW 1241
Query: 941 ISNAYTRTKALLIEHKASVEKVAERLLKKEIL 972
+ + + + LL +H + VAE LL KE L
Sbjct: 1242 LDQSEQQVEQLLKDHYQQLTLVAETLLDKESL 1273
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 555 (200.4 bits), Expect = 5.3e-53, P = 5.3e-53
Identities = 118/260 (45%), Positives = 160/260 (61%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
VR++D+ G E+ EI E V LK+P+ + +G + PKG +L GPPGTGKTLLAKA A
Sbjct: 167 VRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVAT 226
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E N FI V GSE ++ F+G G S V+D+F +A++ AP I+FIDEIDA+ KR GG
Sbjct: 227 ETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGG 286
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL QLL EMDGF D+LD A+LRPGRFDR I VPAPD KGR
Sbjct: 287 DREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGR 346
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I K+H + K +L D ++A +T G GA++ +C EA + A R+L + M F
Sbjct: 347 LEILKIHTR--KMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDF 404
Query: 782 EQAIERVVAGMEKKTNVLQP 801
+A+E+++ +KK V +P
Sbjct: 405 RKAVEKIME--KKKVKVKEP 422
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 500 (181.1 bits), Expect = 5.3e-47, P = 5.3e-47
Identities = 107/256 (41%), Positives = 153/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHT 217
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R + GG S
Sbjct: 218 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDS 277
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I PAPD K RA
Sbjct: 278 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARAD 337
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R K+A PG +GA++ +VC EA + A R+ + + FE
Sbjct: 338 ILKIHSR--KMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEM 395
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 396 AVGKVMQKDSEKNMSI 411
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 498 (180.4 bits), Expect = 8.7e-47, P = 8.7e-47
Identities = 103/253 (40%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ +KDV GC+E ++ E V L +P+++++LG PKG ++ GPPGTGKTL A+A A
Sbjct: 167 ITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVAN 226
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ F+ V GSE ++ +VG G VRD+F MAR CI+F DE+DA+G R GG
Sbjct: 227 RTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGG 286
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD ALLRPGR DR++ PD++GR
Sbjct: 287 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGR 346
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
A IF +H K + RD LA L P TGADI +VC EA + A R + K F
Sbjct: 347 AHIFTIHAKTMSCA--RDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDF 404
Query: 782 EQAIERVVAGMEK 794
+AI++V+ K
Sbjct: 405 LEAIDKVIKSYAK 417
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 498 (180.4 bits), Expect = 8.7e-47, P = 8.7e-47
Identities = 107/256 (41%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ V G + EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R + GG S
Sbjct: 234 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDS 293
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I PAPD K RA
Sbjct: 294 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQ 353
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R K+A PG +GA++ +VC EA + A R+ + + FE
Sbjct: 354 ILKIHSR--KMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEM 411
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 412 AVGKVMQKDSEKNMSI 427
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 495 (179.3 bits), Expect = 1.9e-46, P = 1.9e-46
Identities = 106/257 (41%), Positives = 154/257 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 143 YEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 202
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVG-RKRGGRNFGGH 662
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG GG
Sbjct: 203 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGS--GGD 260
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
SE + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 261 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 320
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 321 DILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 378
Query: 783 QAIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 379 MAVAKVMQKDSEKNMSI 395
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 494 (179.0 bits), Expect = 2.4e-46, P = 2.4e-46
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V + +P++++ LG PKG + GPPGTGKTLLA+A A
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR CI+F DE+DA+G R GG
Sbjct: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +++ ++DGF D LD ALLRPGR DR++ PD++ R
Sbjct: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + + +RD LA L P TGADI +VC EA + A R T+ K F
Sbjct: 345 TQIFKIHTRTM--NCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402
Query: 782 EQAIERVVAGMEK 794
A+ +V+ G +K
Sbjct: 403 LDAVNKVIKGYQK 415
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 494 (179.0 bits), Expect = 2.4e-46, P = 2.4e-46
Identities = 107/254 (42%), Positives = 147/254 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC++ ++ E V L +P++Y++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDAVG R GG
Sbjct: 234 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGG 293
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR++ PD+ GR
Sbjct: 294 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGR 353
Query: 722 ASIFKVHLKPLKTDLD-RDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
A I K+H K + + D R DL LA L P TGA+I +VC EA + A R K
Sbjct: 354 AHILKIHAKQMSVERDIRYDL---LARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 410
Query: 781 FEQAIERVVAGMEK 794
F +AI +VV G K
Sbjct: 411 FLEAINKVVKGYAK 424
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 494 (179.0 bits), Expect = 2.4e-46, P = 2.4e-46
Identities = 107/254 (42%), Positives = 147/254 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC++ ++ E V L +P++Y++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDAVG R GG
Sbjct: 234 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGG 293
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR++ PD+ GR
Sbjct: 294 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGR 353
Query: 722 ASIFKVHLKPLKTDLD-RDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
A I K+H K + + D R DL LA L P TGA+I +VC EA + A R K
Sbjct: 354 AHILKIHAKQMSVERDIRYDL---LARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 410
Query: 781 FEQAIERVVAGMEK 794
F +AI +VV G K
Sbjct: 411 FLEAINKVVKGYAK 424
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 105/256 (41%), Positives = 151/256 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 147 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 206
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 207 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDS 266
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 267 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLD 326
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 327 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 384
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 385 AVAKVMQKDSEKNMSI 400
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 154 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 213
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 214 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 273
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 274 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 333
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 334 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 391
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 392 AVAKVMQKDSEKNMSI 407
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 328 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 386 AVAKVMQKDSEKNMSI 401
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 328 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 386 AVAKVMQKDSEKNMSI 401
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 328 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 386 AVAKVMQKDSEKNMSI 401
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 328 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 386 AVAKVMQKDSEKNMSI 401
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 215
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 216 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 275
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 276 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 335
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 336 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 393
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 394 AVAKVMQKDSEKNMSI 409
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 215
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 216 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 275
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 276 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 335
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 336 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 393
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 394 AVAKVMQKDSEKNMSI 409
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 328 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 386 AVAKVMQKDSEKNMSI 401
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 328 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 386 AVAKVMQKDSEKNMSI 401
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 493 (178.6 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 104/256 (40%), Positives = 152/256 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ + G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R GG S
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLRPGR DR+I P P+ + R
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A L PG +GA++ VC EA + A R+ + + FE
Sbjct: 328 ILKIHSR--KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 386 AVAKVMQKDSEKNMSI 401
>WB|WBGene00022222 [details] [associations]
symbol:Y73B3A.21 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR000642 Pfam:PF01434 GO:GO:0005524
GO:GO:0006898 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 EMBL:FO081721 RefSeq:NP_508082.2
ProteinModelPortal:Q95XE1 SMR:Q95XE1 STRING:Q95XE1 PaxDb:Q95XE1
EnsemblMetazoa:Y73B3A.21 GeneID:190639 KEGG:cel:CELE_Y73B3A.21
UCSC:Y73B3A.21 CTD:190639 WormBase:Y73B3A.21 OMA:GEAYERT
NextBio:946466 Uniprot:Q95XE1
Length = 242
Score = 490 (177.5 bits), Expect = 6.4e-46, P = 6.4e-46
Identities = 103/211 (48%), Positives = 143/211 (67%)
Query: 759 NVCNEAALIAARDLHTTIVMKHFEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAG 818
NVCNE+A+ AA + + +K E A++RV+AG EK++ L EE++ VAYHEAGHA+ G
Sbjct: 2 NVCNESAIRAAFNKCHVVTIKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVG 61
Query: 819 WFLRYADPLLKVSIIPR-GKGLGYAQYLPRE-QYLYSKEQLLDRMCMTLGGRVSEEIFFG 876
W L + D LLKV+IIP+ LG+AQY PR+ ++LYSK++L DRMCM LGGR +E + FG
Sbjct: 62 WMLEHTDALLKVTIIPQTSAALGFAQYSPRDDKHLYSKDELFDRMCMMLGGRCAENLKFG 121
Query: 877 RITTGAEDDLKKVTQSAYAQVAHFGMNEKVGNVSFDMPQPGEMVLEKPYSESTAQLIDNE 936
RIT+GA+DDL+KVT+SAYAQV +GM+ VG +SF + G + KPYS+ A D E
Sbjct: 122 RITSGAQDDLQKVTKSAYAQVKLYGMSSIVGPLSFPNTE-GFQI--KPYSKKFASTFDQE 178
Query: 937 VRSLISNAYTRTKALLIEHKASVEKVAERLL 967
+++ A T L+ + +E V RLL
Sbjct: 179 ATLIVAKANEATTDLIKNNMDKLETVCARLL 209
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 489 (177.2 bits), Expect = 8.3e-46, P = 8.3e-46
Identities = 101/253 (39%), Positives = 145/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ + D+ GC+E ++ E V L P++++ LG PKG +L GPPGTGKTL A+A A
Sbjct: 159 ITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIAN 218
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MA+ CILFIDE+DA+G RG + G
Sbjct: 219 RTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHG 278
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + T+ +++ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 279 DHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGR 338
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + ++ RD LA L P TG+DI +VC EA + A R TI K
Sbjct: 339 THIFKIHANTM--NMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDL 396
Query: 782 EQAIERVVAGMEK 794
AI +V+ G ++
Sbjct: 397 LLAINKVIHGCKQ 409
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 489 (177.2 bits), Expect = 8.3e-46, P = 8.3e-46
Identities = 101/253 (39%), Positives = 145/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ + D+ GC+E ++ E V L P++++ LG PKG +L GPPGTGKTL A+A A
Sbjct: 159 ITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIAN 218
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MA+ CILFIDE+DA+G RG + G
Sbjct: 219 RTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHG 278
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + T+ +++ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 279 DHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGR 338
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + ++ RD LA L P TG+DI +VC EA + A R TI K
Sbjct: 339 THIFKIHANTM--NMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDL 396
Query: 782 EQAIERVVAGMEK 794
AI +V+ G ++
Sbjct: 397 LLAINKVIHGCKQ 409
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 486 (176.1 bits), Expect = 1.7e-45, P = 1.7e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E + E V L +P++++ LG PKG ML GPPGTGKTL A+A A
Sbjct: 176 VTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVAN 235
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR CI+F DEIDA+G R GG
Sbjct: 236 RTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGG 295
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF + LD+AL+RPGR DR++ PD++GR
Sbjct: 296 DNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGR 355
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
A I ++H K + +D+D +A L P TGA++ +VC EA + A R K F
Sbjct: 356 AHILRIHAKSMA--IDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDF 413
Query: 782 EQAIERVVAGMEK 794
A+++VV G +K
Sbjct: 414 LDAVQKVVKGNQK 426
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 485 (175.8 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 163 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 222
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 223 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 282
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 283 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 342
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 343 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 400
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 401 LEAVNKVIKSYAK 413
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 171 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 230
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 231 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 290
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 291 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 350
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 351 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 408
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 409 LEAVNKVIKSYAK 421
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 35 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 94
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 95 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 154
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 155 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 214
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 215 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 272
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 273 LEAVNKVIKSYAK 285
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 214 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 273
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 274 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 333
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 334 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 393
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 394 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 451
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 452 LEAVNKVIKSYAK 464
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 173 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 232
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 233 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 292
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 293 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 352
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 353 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 410
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 411 LEAVNKVIKSYAK 423
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 484 (175.4 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/253 (39%), Positives = 146/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 483 (175.1 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 107/259 (41%), Positives = 146/259 (56%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E EI E V L +P+ Y D+G K PKG +L GPPGTGKTLLAKA A E
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR+MF +A +HAP I+FIDEIDAVG KR GG
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D LD AL+RPGR DR+I +P PD K +
Sbjct: 312 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRR 371
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
IF++H + D D + +GADI +C EA L+A R+ I +
Sbjct: 372 IFQIHTSKMTMSPDVD--LEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRK 429
Query: 784 AIERVVAGMEKKTNVLQPE 802
A ++ + +KK N+ PE
Sbjct: 430 ARDKAL--FQKKGNI--PE 444
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 483 (175.1 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 107/259 (41%), Positives = 146/259 (56%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E EI E V L +P+ Y D+G K PKG +L GPPGTGKTLLAKA A E
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR+MF +A +HAP I+FIDEIDAVG KR GG
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D LD AL+RPGR DR+I +P PD K +
Sbjct: 312 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRR 371
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
IF++H + D D + +GADI +C EA L+A R+ I +
Sbjct: 372 IFQIHTSKMTMSPDVD--LEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRK 429
Query: 784 AIERVVAGMEKKTNVLQPE 802
A ++ + +KK N+ PE
Sbjct: 430 ARDKAL--FQKKGNI--PE 444
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 482 (174.7 bits), Expect = 4.7e-45, P = 4.7e-45
Identities = 101/260 (38%), Positives = 152/260 (58%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P++++ LG PKG +L GPPGTGKTL A+A A
Sbjct: 183 VTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVAN 242
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR CI+F DE+DA+G R GG
Sbjct: 243 RTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGG 302
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF + LD ALLRPGR DR++ PD++GR
Sbjct: 303 DNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGR 362
Query: 722 ASIFKVHLKPLKTDLD-RDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
A+IF++H K + + D R +L ++ L P TGA++ +VC EA + A R K
Sbjct: 363 ANIFRIHSKTMSVEKDIRWEL---ISRLCPNATGAELRSVCTEAGMFAIRARRKVANEKD 419
Query: 781 FEQAIERVVAGMEKKTNVLQ 800
F +A+++V+ G K ++ Q
Sbjct: 420 FLKAVDKVIKGNLKFSSTSQ 439
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 482 (174.7 bits), Expect = 4.7e-45, P = 4.7e-45
Identities = 101/244 (41%), Positives = 145/244 (59%)
Query: 548 VAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 606
V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 146 VGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECK 205
Query: 607 FITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQE 666
FI VSGSE ++ ++G G VR++F MAR+HAP I+F+DEID++G R + GG SE +
Sbjct: 206 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQ 265
Query: 667 NTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFK 726
T+ +LL ++DGF D+LD ALLRPGR DR+I PAP + R I K
Sbjct: 266 RTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDILK 325
Query: 727 VHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIE 786
+H + + +L R RK+A G +GAD+ VC EA + A R+ + + FE A+
Sbjct: 326 IHSRSM--NLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVA 383
Query: 787 RVVA 790
+V++
Sbjct: 384 KVMS 387
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 481 (174.4 bits), Expect = 6.1e-45, P = 6.1e-45
Identities = 102/254 (40%), Positives = 147/254 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR++ PD GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGR 351
Query: 722 ASIFKVHLKPLKTDLD-RDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
+ IFK+H + + + D R DL LA L P TGA+I +VC EA + A R K
Sbjct: 352 SHIFKIHARSMSVERDIRFDL---LARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 408
Query: 781 FEQAIERVVAGMEK 794
F +A+++V+ K
Sbjct: 409 FLEAVKKVIKSYAK 422
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 480 (174.0 bits), Expect = 7.8e-45, P = 7.8e-45
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC++ ++ E V L +P+++ LG PKG +L GPPGTGKTL A+A A
Sbjct: 206 VTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVAN 265
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR CI+F DEIDAVG R GG
Sbjct: 266 RTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGG 325
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF + LD ALLRPGR DR++ PD++GR
Sbjct: 326 DNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGR 385
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
A+IF++H K + ++R ++ L P TGA++ +VC EA + A R K F
Sbjct: 386 ANIFRIHSKSMS--VERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDF 443
Query: 782 EQAIERVVAGMEK 794
+A+++V++G +K
Sbjct: 444 LKAVDKVISGYKK 456
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 478 (173.3 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 100/253 (39%), Positives = 145/253 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG + PKG +L GPPGTGKTL A+A A
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR C++F DEIDA+G R GG
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF D LD AL+RPGR DR+I PD++GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGR 351
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I K+H + + ++RD LA L P TGA+I +VC EA + A R K F
Sbjct: 352 THILKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 409
Query: 782 EQAIERVVAGMEK 794
+A+ +V+ K
Sbjct: 410 LEAVNKVIKSYAK 422
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 477 (173.0 bits), Expect = 1.6e-44, P = 1.6e-44
Identities = 99/250 (39%), Positives = 145/250 (58%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV GC+E ++ E V L +P+++++LG PKGA+L GPPGTGKTL A+A A
Sbjct: 182 VTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVAN 241
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ FI V GSE ++ +VG G VR++F MAR CI+F DEIDAVG R GG
Sbjct: 242 RTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGG 301
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+E + T+ +L+ ++DGF LD AL+RPGR DR+I PD++GR
Sbjct: 302 DNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGR 361
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
A+I ++H K + ++RD ++ L P TGA++ +V EA + A R K F
Sbjct: 362 ANILRIHAKSMS--VERDIRWELISRLCPNATGAELRSVATEAGMFAIRARRKVATEKDF 419
Query: 782 EQAIERVVAG 791
A+++V+ G
Sbjct: 420 LAAVDKVIKG 429
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 465 (168.7 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
Identities = 102/257 (39%), Positives = 155/257 (60%)
Query: 544 RFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
++ D+ G ++ EI+E + + +K +++ LG K PKGA++ GPPGTGKTLLA+A A E
Sbjct: 209 KYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAE 268
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
N F+ ++G + ++MF+G G VRD F++A++ AP I+FIDE+DAVG KR G
Sbjct: 269 TNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGD 328
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E + T+ +LL ++DGF DVLD ALLR GR DR+I P P+ + RA
Sbjct: 329 REVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARA 388
Query: 723 SIFKVHLKPLKTDLDRDDLS-RKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
+I ++H + + + D ++ +LA T F GA + VC EA +IA R H+ I +++
Sbjct: 389 NILQIHSRKMTVE---DSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGHSKIGHENY 445
Query: 782 EQAIERVVAGMEKKTNV 798
AI V A +K TN+
Sbjct: 446 VDAIAEVQA-KKKDTNM 461
Score = 37 (18.1 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 260 DKNKKSAEKPKEEGKPSDSTQ 280
D ++ +K KE+G D Q
Sbjct: 9 DLEREERDKKKEQGDGGDGKQ 29
Score = 37 (18.1 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 328 DKNKKSAEKPKEEGKPSDSTQ 348
D ++ +K KE+G D Q
Sbjct: 9 DLEREERDKKKEQGDGGDGKQ 29
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 474 (171.9 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 104/256 (40%), Positives = 150/256 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 142 YEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHT 201
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
FI VSGSE ++ F+G G VR++F MAR+HAP I+F+DEID++G R G S
Sbjct: 202 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGD-S 260
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF DVLD+ALLRPGR DR+I P P+ + R
Sbjct: 261 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLD 320
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I K+H + K +L R RK+A PG +GA++ VC EA + A R+ + + FE
Sbjct: 321 ILKIHSR--KMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 378
Query: 784 AIERVVA-GMEKKTNV 798
A+ +V+ EK ++
Sbjct: 379 AVSKVMMKDSEKNMSI 394
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 474 (171.9 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 103/255 (40%), Positives = 149/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF++H L D+ DDL + A +GADI +C EA L+A R+ + + F
Sbjct: 364 IFQIHTSRMTLADDVTLDDL---IMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 782 EQAIERVVAGMEKKT 796
+++ E V+ ++ T
Sbjct: 420 KKSKENVLYKKQEGT 434
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 474 (171.9 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 103/255 (40%), Positives = 149/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF++H L D+ DDL + A +GADI +C EA L+A R+ + + F
Sbjct: 364 IFQIHTSRMTLADDVTLDDL---IMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 782 EQAIERVVAGMEKKT 796
+++ E V+ ++ T
Sbjct: 420 KKSKENVLYKKQEGT 434
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 474 (171.9 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 103/255 (40%), Positives = 149/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 111 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 170
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 171 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 230
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 231 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 290
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF++H L D+ DDL + A +GADI +C EA L+A R+ + + F
Sbjct: 291 IFQIHTSRMTLADDVTLDDL---IMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDF 346
Query: 782 EQAIERVVAGMEKKT 796
+++ E V+ ++ T
Sbjct: 347 KKSKENVLYKKQEGT 361
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 474 (171.9 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 103/255 (40%), Positives = 149/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF++H L D+ DDL + A +GADI +C EA L+A R+ + + F
Sbjct: 364 IFQIHTSRMTLADDVTLDDL---IMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 782 EQAIERVVAGMEKKT 796
+++ E V+ ++ T
Sbjct: 420 KKSKENVLYKKQEGT 434
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 474 (171.9 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 103/255 (40%), Positives = 149/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF++H L D+ DDL + A +GADI +C EA L+A R+ + + F
Sbjct: 364 IFQIHTSRMTLADDVTLDDL---IMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 782 EQAIERVVAGMEKKT 796
+++ E V+ ++ T
Sbjct: 420 KKSKENVLYKKQEGT 434
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 474 (171.9 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 103/255 (40%), Positives = 149/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF++H L D+ DDL + A +GADI +C EA L+A R+ + + F
Sbjct: 364 IFQIHTSRMTLADDVTLDDL---IMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 782 EQAIERVVAGMEKKT 796
+++ E V+ ++ T
Sbjct: 420 KKSKENVLYKKQEGT 434
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 474 (171.9 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 103/255 (40%), Positives = 149/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF++H L D+ DDL + A +GADI +C EA L+A R+ + + F
Sbjct: 364 IFQIHTSRMTLADDVTLDDL---IMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 782 EQAIERVVAGMEKKT 796
+++ E V+ ++ T
Sbjct: 420 KKSKENVLYKKQEGT 434
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 472 (171.2 bits), Expect = 5.7e-44, P = 5.7e-44
Identities = 100/243 (41%), Positives = 144/243 (59%)
Query: 548 VAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 606
V G + EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 150 VGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCK 209
Query: 607 FITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQE 666
FI VSG+E ++ ++G G VR++F MAR+HAP I+F+DEID++G R + GG SE +
Sbjct: 210 FIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQ 269
Query: 667 NTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFK 726
T+ +LL ++DGF D+LD ALLRPGR DR+I P P + RA I +
Sbjct: 270 RTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILR 329
Query: 727 VHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIE 786
+H + K +L R RK+A G +GAD+ VC EA + A R+ + + FE A+
Sbjct: 330 IHSR--KMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVG 387
Query: 787 RVV 789
+V+
Sbjct: 388 KVM 390
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 471 (170.9 bits), Expect = 7.3e-44, P = 7.3e-44
Identities = 109/259 (42%), Positives = 146/259 (56%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E EI E V L +P+ Y D+G K PKG +L G PGTGKTLLAKA A
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +P I+FIDEIDAVG KR N GG
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGER 306
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD ALLRPGR DR+I P PDIK R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
IF++H K L D + F+GADI +C EA L+A R+ + F++
Sbjct: 367 IFQIHTS--KMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKK 424
Query: 784 AIERVVAGMEKKTNVLQPE 802
A E+V+ +KK V PE
Sbjct: 425 AKEKVM--FKKKEGV--PE 439
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 470 (170.5 bits), Expect = 9.4e-44, P = 9.4e-44
Identities = 100/254 (39%), Positives = 148/254 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 183 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 302
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 303 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 362
Query: 724 IFKVHLKPLKTDLDRDDLSR-KLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
IF++H + DD++ +L +GADI +C EA L+A R+ + + F+
Sbjct: 363 IFQIHTSRMTL---ADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 419
Query: 783 QAIERVVAGMEKKT 796
++ E V+ ++ T
Sbjct: 420 KSKENVLYKKQEGT 433
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 470 (170.5 bits), Expect = 9.4e-44, P = 9.4e-44
Identities = 100/254 (39%), Positives = 148/254 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 182 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 241
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 242 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 301
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 302 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 361
Query: 724 IFKVHLKPLKTDLDRDDLSR-KLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
IF++H + DD++ +L +GADI +C EA L+A R+ + + F+
Sbjct: 362 IFQIHTSRMTL---ADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 418
Query: 783 QAIERVVAGMEKKT 796
++ E V+ ++ T
Sbjct: 419 KSKENVLYKKQEGT 432
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 469 (170.2 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 108/259 (41%), Positives = 146/259 (56%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E EI E V L +P+ Y D+G K PKG +L G PGTGKTLLAKA A
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +P I+FIDEIDAVG KR + GG
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGER 306
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD ALLRPGR DR+I P PDIK R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
IF++H K L D + F+GADI +C EA L+A R+ + F++
Sbjct: 367 IFQIHTS--KMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKK 424
Query: 784 AIERVVAGMEKKTNVLQPE 802
A E+V+ +KK V PE
Sbjct: 425 AKEKVM--FKKKEGV--PE 439
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 468 (169.8 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 101/246 (41%), Positives = 145/246 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 183 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDAVG KR N GG
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 302
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 303 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 362
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
IF +H + T + +LS + A +GADI +C EA L+A R+ + + F++
Sbjct: 363 IFTIHTSRM-TLAEDVNLSELIMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420
Query: 784 AIERVV 789
+ E V+
Sbjct: 421 SKESVL 426
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 467 (169.5 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 100/244 (40%), Positives = 145/244 (59%)
Query: 548 VAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 606
V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 147 VGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 206
Query: 607 FITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG-GRNFGGHSEQ 665
FI VSGSE ++ ++G G VR++F MAR+HAP I+F+DEID++G RG + GG SE
Sbjct: 207 FIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEV 266
Query: 666 ENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIF 725
+ T+ +LL ++DGF D+LD ALLRPGR DR+I P P GR I
Sbjct: 267 QRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDIL 326
Query: 726 KVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAI 785
K+H + K +L R +K++ G +GA++ VC EA + A R+ + + FE A+
Sbjct: 327 KIHSR--KMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAV 384
Query: 786 ERVV 789
+V+
Sbjct: 385 SKVM 388
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 464 (168.4 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 92/233 (39%), Positives = 139/233 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 472 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 531
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 532 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 590
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 591 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 650
Query: 721 RASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ P+ D+D D L++ +T GF+GAD+ +C A +A R+
Sbjct: 651 RVAILKANLRKSPVAKDVDLDFLAK----MTNGFSGADLTEICQRACKLAIRE 699
Score = 306 (112.8 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 80/230 (34%), Positives = 111/230 (48%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G G S R S A D +
Sbjct: 261 ETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPSPQT------ 314
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 315 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 374
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 375 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 422
Score = 70 (29.7 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 466 (169.1 bits), Expect = 2.5e-43, P = 2.5e-43
Identities = 102/255 (40%), Positives = 148/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L G PGTGKTLLAKA A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 363
Query: 724 IFKVHLKPLKT--DLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF++H + D+ DDL LA +GADI +C EA L+A R+ + + F
Sbjct: 364 IFQIHTSRMTVAEDVSLDDLI--LAK--DDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 782 EQAIERVVAGMEKKT 796
+++ E V+ ++ T
Sbjct: 420 KKSKENVLYKKQEGT 434
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 464 (168.4 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 92/233 (39%), Positives = 139/233 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 478 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 596
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 597 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 656
Query: 721 RASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ P+ D+D D L++ +T GF+GAD+ +C A +A R+
Sbjct: 657 RVAILKANLRKSPVAKDVDLDFLAK----MTNGFSGADLTEICQRACKLAIRE 705
Score = 377 (137.8 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 87/230 (37%), Positives = 123/230 (53%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F K+AP I+FIDE+DA+ +
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQT 320
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 321 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 380
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 381 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 428
Score = 70 (29.7 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 463 (168.0 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 92/233 (39%), Positives = 139/233 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 592
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 721 RASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ P+ D+D D L++ +T GF+GAD+ +C A +A R+
Sbjct: 653 RIAILKANLRKSPVAKDVDLDFLAK----MTNGFSGADLTEICQRACKLAIRE 701
Score = 388 (141.6 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKLS-DDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 70 (29.7 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 465 (168.7 bits), Expect = 3.3e-43, P = 3.3e-43
Identities = 100/248 (40%), Positives = 148/248 (59%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ V G E+ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 144 YEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHT 203
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG-GH 662
+ FI VSGSE ++ ++G G VR++F MAR+HAP I+F+DEID++G R + G G
Sbjct: 204 DCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGD 263
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
SE + T+ +LL ++DGF D+LD ALLRPGR DR+I P P + RA
Sbjct: 264 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARA 323
Query: 723 SIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I ++H + + +L R DL + +A G +GA++ VC EA + A R+ + + F
Sbjct: 324 EILRIHSRSM--NLTRGIDL-KSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDF 380
Query: 782 EQAIERVV 789
E A+ +V+
Sbjct: 381 ELAVAKVL 388
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 465 (168.7 bits), Expect = 3.3e-43, P = 3.3e-43
Identities = 102/255 (40%), Positives = 148/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L G PGTGKTLLAKA A +
Sbjct: 184 YADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDA+G KR N GG
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 363
Query: 724 IFKVHLKPLKT--DLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF++H + D+ DDL LA +GADI +C EA L+A R+ + + F
Sbjct: 364 IFQIHTSRMTVADDVTLDDLI--LAK--DDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 782 EQAIERVVAGMEKKT 796
+++ E V+ ++ T
Sbjct: 420 KKSKENVLYKKQEGT 434
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 464 (168.4 bits), Expect = 4.2e-43, P = 4.2e-43
Identities = 92/233 (39%), Positives = 139/233 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 206 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 265
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 266 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 324
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 325 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 384
Query: 721 RASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ P+ D+D D L++ +T GF+GAD+ +C A +A R+
Sbjct: 385 RVAILKANLRKSPVAKDVDLDFLAK----MTNGFSGADLTEICQRACKLAIRE 433
Score = 243 (90.6 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 62/161 (38%), Positives = 83/161 (51%)
Query: 611 SGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTL- 669
SG E + G S +R F A K+AP I+FIDE+DA+ KR H E E +
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT----HGEVERRIV 57
Query: 670 NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFKVHL 729
+QLL MDG + +D AL R GRFDR++ + PD GR I ++H
Sbjct: 58 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 117
Query: 730 KPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
K +K D DL + + T G GAD+A +C+EAAL A R
Sbjct: 118 KNMKL-ADDVDLEQ-VGNETHGHVGADLAALCSEAALQAIR 156
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 446 (162.1 bits), Expect = 4.2e-43, Sum P(2) = 4.2e-43
Identities = 97/248 (39%), Positives = 139/248 (56%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E E+ E V L +P+ Y ++G K PKG +L G PGTGKTLLAKA A +
Sbjct: 203 YADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 262
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ + GSE ++ ++G GP VR +F +A +HAP I+FIDEIDA+G KR GG
Sbjct: 263 SATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGGER 322
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I PD +
Sbjct: 323 EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNTKKK 382
Query: 724 IFKVHLKPLKT--DLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IF +H + D+D D+ + L+ GADI +C EA L+A R+ + M F
Sbjct: 383 IFTLHTSKMSLGDDVDLDEFINQKDDLS----GADIRAICTEAGLMALRERRMRVQMDDF 438
Query: 782 EQAIERVV 789
A ER++
Sbjct: 439 RAARERIM 446
Score = 44 (20.5 bits), Expect = 4.2e-43, Sum P(2) = 4.2e-43
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 260 DKNKKSAEKPKEEGKPSDSTQ 280
DK+KK +KPK E P +T+
Sbjct: 17 DKDKKK-DKPKYEPPPPPTTR 36
Score = 44 (20.5 bits), Expect = 4.2e-43, Sum P(2) = 4.2e-43
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 328 DKNKKSAEKPKEEGKPSDSTQ 348
DK+KK +KPK E P +T+
Sbjct: 17 DKDKKK-DKPKYEPPPPPTTR 36
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 461 (167.3 bits), Expect = 5.4e-43, Sum P(2) = 5.4e-43
Identities = 92/233 (39%), Positives = 139/233 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 592
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 593 GGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 721 RASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ P+ D+D D L++ +T GF+GAD+ +C A +A R+
Sbjct: 653 RMAILKANLRKSPVAKDVDVDFLAK----MTNGFSGADLTEICQRACKLAIRE 701
Score = 388 (141.6 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKLS-DDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 70 (29.7 bits), Expect = 5.4e-43, Sum P(2) = 5.4e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 462 (167.7 bits), Expect = 6.9e-43, P = 6.9e-43
Identities = 103/252 (40%), Positives = 150/252 (59%)
Query: 548 VAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 606
+ G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
Query: 607 FITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG-GHSEQ 665
FI VSGSE ++ ++G G VR++F MAR+HAP I+F+DEID++G R G G SE
Sbjct: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
Query: 666 ENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIF 725
+ T+ +LL ++DGF D+LD+ALLRPGR DR+I P P+ + R I
Sbjct: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDIL 342
Query: 726 KVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQA 784
K+H + K +L R DL +K+A G +GA++ VC EA + A R+ + + FE A
Sbjct: 343 KIHSR--KMNLMRGIDL-KKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMA 399
Query: 785 IERVVAGMEKKT 796
+ +V M+K T
Sbjct: 400 VAKV---MKKDT 408
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 462 (167.7 bits), Expect = 6.9e-43, P = 6.9e-43
Identities = 103/252 (40%), Positives = 150/252 (59%)
Query: 548 VAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 606
+ G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
Query: 607 FITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG-GHSEQ 665
FI VSGSE ++ ++G G VR++F MAR+HAP I+F+DEID++G R G G SE
Sbjct: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
Query: 666 ENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIF 725
+ T+ +LL ++DGF D+LD+ALLRPGR DR+I P P+ + R I
Sbjct: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDIL 342
Query: 726 KVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQA 784
K+H + K +L R DL +K+A G +GA++ VC EA + A R+ + + FE A
Sbjct: 343 KIHSR--KMNLMRGIDL-KKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMA 399
Query: 785 IERVVAGMEKKT 796
+ +V M+K T
Sbjct: 400 VAKV---MKKDT 408
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 460 (167.0 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 93/232 (40%), Positives = 139/232 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 592
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 721 RASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ K+ + +D DL LA +T GF+GAD+ +C A +A R+
Sbjct: 653 RVAILKANLR--KSPVAKDVDLEF-LAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 388 (141.6 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 70 (29.7 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 460 (167.0 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 93/232 (40%), Positives = 139/232 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 592
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 721 RASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ K+ + +D DL LA +T GF+GAD+ +C A +A R+
Sbjct: 653 RVAILKANLR--KSPVAKDVDLEF-LAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 388 (141.6 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 70 (29.7 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 460 (167.0 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 93/232 (40%), Positives = 139/232 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 592
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 721 RASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ K+ + +D DL LA +T GF+GAD+ +C A +A R+
Sbjct: 653 RVAILKANLR--KSPVAKDVDLEF-LAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 388 (141.6 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 70 (29.7 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 460 (167.0 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 93/232 (40%), Positives = 139/232 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 592
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 721 RASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ K+ + +D DL LA +T GF+GAD+ +C A +A R+
Sbjct: 653 RVAILKANLR--KSPVAKDVDLEF-LAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 388 (141.6 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 70 (29.7 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 460 (167.0 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 93/232 (40%), Positives = 139/232 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 592
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 721 RASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ K+ + +D DL LA +T GF+GAD+ +C A +A R+
Sbjct: 653 RVAILKANLR--KSPVAKDVDLEF-LAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 388 (141.6 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 70 (29.7 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 460 (167.0 bits), Expect = 8.4e-43, Sum P(2) = 8.4e-43
Identities = 93/232 (40%), Positives = 139/232 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 490 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 549
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 550 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 608
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 609 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 668
Query: 721 RASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ K+ + +D DL LA +T GF+GAD+ +C A +A R+
Sbjct: 669 RVAILKANLR--KSPVAKDVDLEF-LAKMTNGFSGADLTEICQRACKLAIRE 717
Score = 388 (141.6 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 217 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 276
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 277 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 332
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 333 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 392
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 393 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 440
Score = 70 (29.7 bits), Expect = 8.4e-43, Sum P(2) = 8.4e-43
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 217 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 259
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 461 (167.3 bits), Expect = 8.4e-43, Sum P(3) = 8.4e-43
Identities = 94/266 (35%), Positives = 149/266 (56%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ ++D+ G ++ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDG 593
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+ +NQ+L EMDG D++D A+LRPGR D+ I++P PD K R
Sbjct: 594 GGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 722 ASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMK 779
+I K +L+ P+ D+D D L++ +T GF+GAD+ +C A +A R+ + +
Sbjct: 654 IAILKANLRKSPISKDVDLDFLAK----MTNGFSGADLTEICQRACKLAIRESIENEIRR 709
Query: 780 HFEQAIERVVAGMEKKTNVLQPEEKK 805
E+ +E+ V PE +K
Sbjct: 710 ERERQTNPSAMEVEEDDPV--PEIRK 733
Score = 378 (138.1 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 89/230 (38%), Positives = 124/230 (53%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ G + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 60 (26.2 bits), Expect = 8.4e-43, Sum P(3) = 8.4e-43
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ G + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Score = 49 (22.3 bits), Expect = 8.4e-43, Sum P(3) = 8.4e-43
Identities = 20/91 (21%), Positives = 40/91 (43%)
Query: 401 YGLIGS-VAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVV--NKKWVRVKLLPG- 456
+G +G+ +A L + + K++ D + + ++ L V + +W + P
Sbjct: 404 HGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSA 463
Query: 457 ---NSMDGANFLWFNIGSVDSFERNL-ELAQ 483
++ N W +IG +D +R L EL Q
Sbjct: 464 LRETVVEVPNITWEDIGGLDDVKRELQELVQ 494
Score = 45 (20.9 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 49 NFLWFNIGSVDSFERNL-ELAQ 69
N W +IG +D +R L EL Q
Sbjct: 473 NITWEDIGGLDDVKRELQELVQ 494
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 461 (167.3 bits), Expect = 8.9e-43, P = 8.9e-43
Identities = 100/254 (39%), Positives = 146/254 (57%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + EI E V L +P+ Y ++G K PKG +L GPPGTGKTLLAKA A +
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A +H P I+FIDEIDA+G KR N GG
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 724 IFKVHLKPLKTDLDRDDLSR-KLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
IF++H + DD++ +L +GADI +C EA L+A R+ + + F+
Sbjct: 364 IFQIHTSRMTL---ADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 420
Query: 783 QAIERVVAGMEKKT 796
++ E + KKT
Sbjct: 421 KSKENF---LYKKT 431
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 457 (165.9 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 92/232 (39%), Positives = 139/232 (59%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ + V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 592
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 721 RASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ K+ + +D DL LA +T GF+GAD+ +C A +A R+
Sbjct: 653 RVAILKANLR--KSPVAKDVDLEF-LAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 388 (141.6 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 70 (29.7 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 458 (166.3 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 101/260 (38%), Positives = 149/260 (57%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ DV G ++ EI E V L +P+ Y ++G + PKG +L G PGTGKTLLAKA A +
Sbjct: 187 YADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQT 246
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ + GSE ++ ++G GP VR++F +A ++AP I+FIDEIDAVG KR N GG
Sbjct: 247 SATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGER 306
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PD K +
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRR 366
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
IF++H + L ++ + +GADI +C EA L+A R+ + M+ F++
Sbjct: 367 IFQIHTS--RMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQK 424
Query: 784 AIERVVAGMEKKTNVLQPEE 803
+ E V+ KK PEE
Sbjct: 425 SKENVL--YRKKEGA--PEE 440
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 457 (165.9 bits), Expect = 2.4e-42, P = 2.4e-42
Identities = 99/258 (38%), Positives = 152/258 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ V G ++ E+ E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKR-GGRNFGGH 662
+ FI VSGSE ++ ++G G VR++F MAR+HAP I+F+DEID++G +R G + G
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEH--GD 295
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
SE + T+ +LL ++DGF D+LD+ALLRPGR DR+I P P+++ R
Sbjct: 296 SEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARM 355
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K+H + K +L R K+A +GA++ VC EA + A R+ + + FE
Sbjct: 356 EILKIHSR--KMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 413
Query: 783 QAIERVVAGMEKKTNVLQ 800
A+ +V+ +K L+
Sbjct: 414 MAVAKVMKQDAEKNFTLR 431
>UNIPROTKB|H3BTY6 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 Pfam:PF01434 GO:GO:0005524
GO:GO:0006508 GO:GO:0004222 EMBL:AC092123 HGNC:HGNC:11237
ChiTaRS:SPG7 Ensembl:ENST00000561911 Bgee:H3BTY6 Uniprot:H3BTY6
Length = 210
Score = 457 (165.9 bits), Expect = 2.4e-42, P = 2.4e-42
Identities = 87/158 (55%), Positives = 117/158 (74%)
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
IF+ HLK LK S++LA LTPGF+GADIAN+CNEAAL AAR+ HT++ +FE
Sbjct: 3 IFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEY 62
Query: 784 AIERVVAGMEKKTNVLQPEEKKTVAYHEAGHAVAGWFLRYADPLLKVSIIPR-GKGLGYA 842
A+ERV+AG KK+ +L EE+K VA+HE+GHA+ GW L + + ++KVSI PR LG+A
Sbjct: 63 AVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFA 122
Query: 843 QYLPREQYLYSKEQLLDRMCMTLGGRVSEEIFFGRITT 880
Q LPR+Q+L++KEQL +RMCM LGGR SE + F +T+
Sbjct: 123 QMLPRDQHLFTKEQLFERMCMALGGRASEALSFNEVTS 160
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 457 (165.9 bits), Expect = 2.4e-42, P = 2.4e-42
Identities = 99/258 (38%), Positives = 152/258 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++ V G ++ E+ E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKR-GGRNFGGH 662
+ FI VSGSE ++ ++G G VR++F MAR+HAP I+F+DEID++G +R G + G
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEH--GD 295
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
SE + T+ +LL ++DGF D+LD+ALLRPGR DR+I P P+++ R
Sbjct: 296 SEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARM 355
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I K+H + K +L R K+A +GA++ VC EA + A R+ + + FE
Sbjct: 356 EILKIHSR--KMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 413
Query: 783 QAIERVVAGMEKKTNVLQ 800
A+ +V+ +K L+
Sbjct: 414 MAVAKVMKQDAEKNFTLR 431
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 454 (164.9 bits), Expect = 2.9e-42, Sum P(3) = 2.9e-42
Identities = 96/232 (41%), Positives = 134/232 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ G E K E+ E V + +++P+++ G KG + GPPG GKTLLAKA A
Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI+V G E L M+ G + VR++F AR+ APC+LF DE+D++ +RGG + G
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGD 596
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + LNQLL EMDG D++D ALLRPGR D+ I++P PD
Sbjct: 597 GGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS 656
Query: 721 RASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +IFK L+ K+ + +D D+ LA T GF+GADI +C A A R+
Sbjct: 657 RLNIFKAALR--KSPIAKDVDIGA-LAKYTQGFSGADITEICQRACKYAIRE 705
Score = 390 (142.3 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 95/259 (36%), Positives = 138/259 (53%)
Query: 540 DIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKA 598
D+G + DV G + +I E V L++PQ + +G K PKG +L GPPG+GKTL+A+A
Sbjct: 203 DVG--YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARA 260
Query: 599 TAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRN 658
A E F ++G E + G S +R F A K+AP I+FIDEID++ KR N
Sbjct: 261 VANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTN 320
Query: 659 FGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDI 718
G E+ ++QLL MDG + +D AL R GRFDR+I + PD
Sbjct: 321 --GEVERR-IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE 377
Query: 719 KGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVM 778
GR + ++H K +K D D L R ++ T G+ GAD+A +C EAAL R+ I +
Sbjct: 378 IGRLEVLRIHTKNMKLAEDVD-LER-ISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435
Query: 779 KHFEQAIERVVAGMEKKTN 797
+ + +I+ + TN
Sbjct: 436 E--DDSIDAEILNSMAVTN 452
Score = 75 (31.5 bits), Expect = 2.9e-42, Sum P(3) = 2.9e-42
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 137 DIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
D+G + DV G + +I E V L++PQ + +G K PKG +L
Sbjct: 203 DVG--YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 246
Score = 37 (18.1 bits), Expect = 2.9e-42, Sum P(3) = 2.9e-42
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 463 NFLWFNIGSVDSFERNLE 480
N W +IG +++ +R L+
Sbjct: 476 NVSWNDIGGLENVKRELQ 493
Score = 37 (18.1 bits), Expect = 1.0e-38, Sum P(2) = 1.0e-38
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 49 NFLWFNIGSVDSFERNLE 66
N W +IG +++ +R L+
Sbjct: 476 NVSWNDIGGLENVKRELQ 493
Score = 37 (18.1 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYS-ESTAQLIDNEVRSLISNAYTRTKA 950
FGM+ G + + P G+ +L K + E A I + L++ + ++A
Sbjct: 509 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 560
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 444 (161.4 bits), Expect = 3.1e-42, Sum P(3) = 3.1e-42
Identities = 87/232 (37%), Positives = 134/232 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G +E K E+ E V + ++ P +++ G +G + GPPG GKTLLAKA A
Sbjct: 476 VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIAN 535
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F+++ G E L M+ G + VRD+F AR+ APCILF DE+D++ + RGG
Sbjct: 536 ECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDA 595
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+ +NQ+L EMDG D++D A+LRPGR D+ I++P PD+ R
Sbjct: 596 GGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSR 655
Query: 722 ASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
+I + +L+ P+ D+D LS+ +T GF+GAD+ +C A +A R+
Sbjct: 656 TAILRANLRKSPVAKDVDLMYLSK----ITEGFSGADLTEICQRACKLAIRE 703
Score = 398 (145.2 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 94/240 (39%), Positives = 130/240 (54%)
Query: 539 SDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAK 597
+DIG + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+
Sbjct: 201 NDIG--YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVAR 258
Query: 598 ATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR 657
A A E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 259 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 318
Query: 658 NFGGHSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAP 716
H E E + +QLL MDG + +D AL R GRFDR+I + P
Sbjct: 319 ----HGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIP 374
Query: 717 DIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTI 776
D GR I ++H K +K D D +++A T G GAD+A +C+EAAL A R T I
Sbjct: 375 DSTGRLEILQIHTKNMKLSEDVD--LEQISAETHGHVGADLAALCSEAALQAIRKKMTLI 432
Score = 74 (31.1 bits), Expect = 3.1e-42, Sum P(3) = 3.1e-42
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 136 SDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
+DIG + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 NDIG--YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 245
Score = 49 (22.3 bits), Expect = 3.1e-42, Sum P(3) = 3.1e-42
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 401 YGLIGS-VAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVV--NKKWVRVKLLPG- 456
+G +G+ +A L + + K++T D ++ + ++ L V + KW + P
Sbjct: 406 HGHVGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSA 465
Query: 457 ---NSMDGANFLWFNIGSVDSFERNL-ELAQ 483
++ + W +IG +D +R L EL Q
Sbjct: 466 LRETVVEVPHVNWEDIGGLDEVKRELQELVQ 496
Score = 40 (19.1 bits), Expect = 6.9e-38, Sum P(2) = 6.9e-38
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 52 WFNIGSVDSFERNL-ELAQ 69
W +IG +D +R L EL Q
Sbjct: 478 WEDIGGLDEVKRELQELVQ 496
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 456 (165.6 bits), Expect = 3.1e-42, P = 3.1e-42
Identities = 97/246 (39%), Positives = 141/246 (57%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E E+ E + L +P+ Y ++G K PKG +L G PGTGKTLLAKA A +
Sbjct: 183 YSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQT 242
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR++F +A + AP I+FIDEIDAVG KR GG
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGER 302
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I P PDIK +
Sbjct: 303 EIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRK 362
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
IF++H K +L D + +GADI +C E+ L+A R+ + F++
Sbjct: 363 IFEIHTA--KMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKK 420
Query: 784 AIERVV 789
A E+V+
Sbjct: 421 AKEKVL 426
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 455 (165.2 bits), Expect = 3.9e-42, P = 3.9e-42
Identities = 95/243 (39%), Positives = 142/243 (58%)
Query: 548 VAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 606
+ G ++ EI E + LK+P+ + LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 134 IGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCR 193
Query: 607 FITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQE 666
FI VSGSE ++ ++G G VR++F MAR+HAP I+F+DEID++G R G SE +
Sbjct: 194 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQ 253
Query: 667 NTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIFK 726
T+ +LL ++DGF D+LD ALLRPGR DR+I P P ++ RA I +
Sbjct: 254 RTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADILR 313
Query: 727 VHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQAIE 786
+H + + +L R K+A G +GA++ VC EA + A R+ + + F+ A
Sbjct: 314 IHSRSM--NLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFDLATA 371
Query: 787 RVV 789
+++
Sbjct: 372 KIL 374
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 438 (159.2 bits), Expect = 4.5e-42, Sum P(3) = 4.5e-42
Identities = 100/253 (39%), Positives = 143/253 (56%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
VR++D+ G +E K ++ E V + + +P++++ G +G + GPPGTGKT+LAKA A
Sbjct: 493 VRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 552
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR--NF 659
E FI+V G E L M+ G S +RD+F AR APCI+F+DE+D++ + RGG +
Sbjct: 553 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDA 612
Query: 660 GGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIK 719
GG S++ +NQLL EMDG + LD AL RPGR D I+VP PD
Sbjct: 613 GGASDR--VVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDEL 670
Query: 720 GRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIV 777
GR SI K L+ P+ D+D ++ K T GF+GAD+ + A IA ++ T +
Sbjct: 671 GRLSILKAQLRKTPVSDDVDLQYIANK----THGFSGADLGFITQRAVKIAIKESITADI 726
Query: 778 --MKHFEQAIERV 788
K E A E V
Sbjct: 727 NRTKALEAAGEDV 739
Score = 403 (146.9 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 89/236 (37%), Positives = 133/236 (56%)
Query: 537 NSSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLL 595
N +++G + D+ GC + +I E V L++PQ + +G K P+G +L GPPGTGKTL+
Sbjct: 215 NLNEVG--YDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLM 272
Query: 596 AKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG 655
A+A A E F ++G E + G S +R F A K++P I+FIDEID++ KR
Sbjct: 273 ARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKRE 332
Query: 656 GRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPA 715
N G E+ ++QLL MDG + +D AL R GRFDR++ +
Sbjct: 333 KTN--GEVERR-VVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGI 389
Query: 716 PDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
PD GR I ++H K +K D DL + +AA T G+ G+D+A +C+EAA+ R+
Sbjct: 390 PDPTGRLEILQIHTKNMKLG-DDVDLEQ-IAAETHGYVGSDVAALCSEAAMQQIRE 443
Score = 82 (33.9 bits), Expect = 4.5e-42, Sum P(3) = 4.5e-42
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 134 NSSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
N +++G + D+ GC + +I E V L++PQ + +G K P+G +L
Sbjct: 215 NLNEVG--YDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLL 261
Score = 47 (21.6 bits), Expect = 4.5e-42, Sum P(3) = 4.5e-42
Identities = 23/104 (22%), Positives = 46/104 (44%)
Query: 401 YGLIGS-VAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVVNKKWVRVKLLPGNS- 458
+G +GS VA L + + +++ D + + +++ L V + + R L N
Sbjct: 422 HGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENF-RFALGVSNPS 480
Query: 459 -------MDGANFLWFNIGSVDSFERNLELAQAQMHID-PANYL 494
++ N W +IG +D +++L Q Q +D P +L
Sbjct: 481 ALREVAVVEVPNVRWEDIGGLDEVKQDLR-EQVQYPVDHPEKFL 523
Score = 37 (18.1 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYS-ESTAQLIDNEVRSLIS 942
FG++ G + + P G+ +L K + E A I + L+S
Sbjct: 525 FGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLS 568
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 453 (164.5 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 92/232 (39%), Positives = 135/232 (58%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E+ K E+ E V + +++P +++ G KG + GPPG GKTLLAKA A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG- 660
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ + RGG N G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG-NIGD 592
Query: 661 GHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
G + +NQ+L EMDG D++D A+LRPGR D+ I++P PD K
Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 721 RASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R +I K +L+ D DL LA +T GF+GAD+ +C A +A R+
Sbjct: 653 RVAILKANLRKSPVAKAGDVDLEF-LAKMTNGFSGADLTEICQRACKLAIRE 703
Score = 388 (141.6 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 90/230 (39%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDE+DA+ KR
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---- 316
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR++ + PD G
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR 770
R I ++H K +K D DL + +A T G GAD+A +C+EAAL A R
Sbjct: 377 RLEILQIHTKNMKL-ADDVDLEQ-VANETHGHVGADLAALCSEAALQAIR 424
Score = 70 (29.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G +L
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 454 (164.9 bits), Expect = 5.0e-42, P = 5.0e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLGNVCTEAGMFAIRADH 359
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 360 DFVVQEDFMKAVRKV 374
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 427 (155.4 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 98/256 (38%), Positives = 139/256 (54%)
Query: 530 ESTAKLINSSDI-GVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGP 587
+S+ +L+ ++ V++ D+ G + K E+ E V L P+ Y +G + P G ++ GP
Sbjct: 121 DSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGP 180
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKT+L KA A E V FI V GSEF++ ++G GP VRD+F +AR+++P I+FIDE+
Sbjct: 181 PGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEV 240
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DA+ KR G E + L +LL +MDGF D LD ALLRPGR
Sbjct: 241 DAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRL 300
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
DR+I P PD K + IF+ + K ++ D T + ADIA + EA +
Sbjct: 301 DRKIEFPLPDRKQKRLIFQTIIS--KMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQ 358
Query: 768 AARDLHTTIVMKHFEQ 783
A R I FEQ
Sbjct: 359 AIRKNRYIITANDFEQ 374
Score = 53 (23.7 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 126 MESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTERN 185
MES +K + D +R K++ + +++I+ + YI K K ++ +N
Sbjct: 1 MESVSKCLTEEDYYIRLKNL----KKQIDILNI------QEDYIKEEHKNLKRELIRSKN 50
Query: 186 KSRMAQRM-LCTAKKLERFLLHNINHGRYSSFHINNS----LATLPKSNFPPTTVESVLH 240
+ + Q + L + L+ ++ N N+G SS +N L+TL K + P+ V LH
Sbjct: 51 EIKRIQSVPLIIGQFLD--IIDN-NYGIVSSTAGSNYYVRILSTLNKEDLKPS-VSVALH 106
Query: 241 Q 241
+
Sbjct: 107 R 107
Score = 38 (18.4 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 529 MESTAKLINSSDIGVRFKDV 548
MES +K + D +R K++
Sbjct: 1 MESVSKCLTEEDYYIRLKNL 20
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 427 (155.4 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 98/256 (38%), Positives = 139/256 (54%)
Query: 530 ESTAKLINSSDI-GVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGP 587
+S+ +L+ ++ V++ D+ G + K E+ E V L P+ Y +G + P G ++ GP
Sbjct: 121 DSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGP 180
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKT+L KA A E V FI V GSEF++ ++G GP VRD+F +AR+++P I+FIDE+
Sbjct: 181 PGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEV 240
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DA+ KR G E + L +LL +MDGF D LD ALLRPGR
Sbjct: 241 DAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRL 300
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
DR+I P PD K + IF+ + K ++ D T + ADIA + EA +
Sbjct: 301 DRKIEFPLPDRKQKRLIFQTIIS--KMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQ 358
Query: 768 AARDLHTTIVMKHFEQ 783
A R I FEQ
Sbjct: 359 AIRKNRYIITANDFEQ 374
Score = 53 (23.7 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 126 MESTAKLINSSDIGVRFKDVAGCEEAKVEIMEFVNFLKNPQQYIDLGAKIPKGAMLTERN 185
MES +K + D +R K++ + +++I+ + YI K K ++ +N
Sbjct: 1 MESVSKCLTEEDYYIRLKNL----KKQIDILNI------QEDYIKEEHKNLKRELIRSKN 50
Query: 186 KSRMAQRM-LCTAKKLERFLLHNINHGRYSSFHINNS----LATLPKSNFPPTTVESVLH 240
+ + Q + L + L+ ++ N N+G SS +N L+TL K + P+ V LH
Sbjct: 51 EIKRIQSVPLIIGQFLD--IIDN-NYGIVSSTAGSNYYVRILSTLNKEDLKPS-VSVALH 106
Query: 241 Q 241
+
Sbjct: 107 R 107
Score = 38 (18.4 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 529 MESTAKLINSSDIGVRFKDV 548
MES +K + D +R K++
Sbjct: 1 MESVSKCLTEEDYYIRLKNL 20
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 136 MSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 195
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 316 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 374 DFVVQEDFMKAVRKV 388
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 122 MSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 360 DFVVQEDFMKAVRKV 374
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 360 DFVVQEDFMKAVRKV 374
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 128 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 187
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 188 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 247
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 248 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 307
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 308 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 365
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 366 DFVVQEDFMKAVRKV 380
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 360 DFVVQEDFMKAVRKV 374
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 136 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 195
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 316 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 374 DFVVQEDFMKAVRKV 388
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 360 DFVVQEDFMKAVRKV 374
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 360 DFVVQEDFMKAVRKV 374
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 114 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 173
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 174 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 233
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 234 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 293
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 294 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 351
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 352 DFVVQEDFMKAVRKV 366
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 453 (164.5 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 136 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 195
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ + D + L+ GF GAD+ NVC EA + A R H
Sbjct: 316 DLPNEQARLDILKIHAGPITKHGEID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 774 TTIVMKHFEQAIERV 788
+V + F +A+ +V
Sbjct: 374 DFVVQEDFMKAVRKV 388
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 443 (161.0 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 99/280 (35%), Positives = 153/280 (54%)
Query: 540 DIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKA 598
++ V + D+ G + K E+ E V + + +P QY G KG + GPPGTGKTLLAKA
Sbjct: 482 NVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKA 541
Query: 599 TAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRN 658
A E + FI+V G E L M+ G S +RD+F AR AP ++F+DE+D++ + RGG +
Sbjct: 542 VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSH 601
Query: 659 FGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDI 718
+ +NQLL EMDG D +D ALLRPGR D+ I+VP PD
Sbjct: 602 GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDE 661
Query: 719 KGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD-LHTT 775
R SI + L+ PL+ LD +++++ +T GF+GAD++ + +A A +D +
Sbjct: 662 PARLSILQAQLRNTPLEPGLDLNEIAK----ITHGFSGADLSYIVQRSAKFAIKDSIEAQ 717
Query: 776 IVMKHFEQAIERV-VAGMEKKTNVLQPEEKKTVAYHEAGH 814
+ + ++ E+V ++ K + + EE+ V Y H
Sbjct: 718 VKINKIKEEKEKVKTEDVDMKVD--EVEEEDPVPYITRAH 755
Score = 411 (149.7 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 93/248 (37%), Positives = 139/248 (56%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC++ +I E V L++PQ + +G K PKG ++ GPPGTGKT++A+A A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K++P I+FIDEID++ KR N G
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTN--G 329
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E+ ++QLL MDG + +D AL R GRFDR++ + PD +GR
Sbjct: 330 EVERR-VVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I ++H K +K D DL +A+ T GF GADIA++C+EAA+ R+ I ++
Sbjct: 389 LEILRIHTKNMKL-ADDVDLEA-IASETHGFVGADIASLCSEAAMQQIREKMDLIDLE-- 444
Query: 782 EQAIERVV 789
E+ I+ V
Sbjct: 445 EETIDTEV 452
Score = 80 (33.2 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC++ +I E V L++PQ + +G K PKG ++
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILM 254
Score = 42 (19.8 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 896 QVAHFGMNEKVGNVSFDMPQPGEMVLEKPYS-ESTAQLIDNEVRSLISNAYTRTKA 950
Q FG+ G + F P G+ +L K + E +A I + L+S Y +++
Sbjct: 513 QYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 568
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 443 (161.0 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 99/280 (35%), Positives = 153/280 (54%)
Query: 540 DIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKA 598
++ V + D+ G + K E+ E V + + +P QY G KG + GPPGTGKTLLAKA
Sbjct: 482 NVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKA 541
Query: 599 TAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRN 658
A E + FI+V G E L M+ G S +RD+F AR AP ++F+DE+D++ + RGG +
Sbjct: 542 VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSH 601
Query: 659 FGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDI 718
+ +NQLL EMDG D +D ALLRPGR D+ I+VP PD
Sbjct: 602 GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDE 661
Query: 719 KGRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD-LHTT 775
R SI + L+ PL+ LD +++++ +T GF+GAD++ + +A A +D +
Sbjct: 662 PARLSILQAQLRNTPLEPGLDLNEIAK----ITHGFSGADLSYIVQRSAKFAIKDSIEAQ 717
Query: 776 IVMKHFEQAIERV-VAGMEKKTNVLQPEEKKTVAYHEAGH 814
+ + ++ E+V ++ K + + EE+ V Y H
Sbjct: 718 VKINKIKEEKEKVKTEDVDMKVD--EVEEEDPVPYITRAH 755
Score = 411 (149.7 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 93/248 (37%), Positives = 139/248 (56%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC++ +I E V L++PQ + +G K PKG ++ GPPGTGKT++A+A A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K++P I+FIDEID++ KR N G
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTN--G 329
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E+ ++QLL MDG + +D AL R GRFDR++ + PD +GR
Sbjct: 330 EVERR-VVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I ++H K +K D DL +A+ T GF GADIA++C+EAA+ R+ I ++
Sbjct: 389 LEILRIHTKNMKL-ADDVDLEA-IASETHGFVGADIASLCSEAAMQQIREKMDLIDLE-- 444
Query: 782 EQAIERVV 789
E+ I+ V
Sbjct: 445 EETIDTEV 452
Score = 80 (33.2 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC++ +I E V L++PQ + +G K PKG ++
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILM 254
Score = 42 (19.8 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 896 QVAHFGMNEKVGNVSFDMPQPGEMVLEKPYS-ESTAQLIDNEVRSLISNAYTRTKA 950
Q FG+ G + F P G+ +L K + E +A I + L+S Y +++
Sbjct: 513 QYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 568
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 449 (163.1 bits), Expect = 7.1e-42, Sum P(3) = 7.1e-42
Identities = 101/272 (37%), Positives = 151/272 (55%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + K E+ E V + +++P++Y+ G + +G + GPPG GKTLLAKA A E
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG-GH 662
FI++ G E L M+ G + VRD+F AR APC+LF DE+D++ + RGG G G
Sbjct: 542 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGG 601
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
+ +NQ+L EMDG D++D A+LRPGR D+ I++P PD R
Sbjct: 602 GASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRH 661
Query: 723 SIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD-LHTTIVMKH 780
I K L+ KT L +D DL+ LA T GF+GAD+ +C A +A R+ + I ++
Sbjct: 662 QILKASLR--KTPLSKDLDLTF-LAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEK 718
Query: 781 FEQAIERVVAGME-KKTNVLQPEEKKTVAYHE 811
Q +R G E + + + P + T A+ E
Sbjct: 719 ERQ--DRQARGEELMEDDAVDPVPEITRAHFE 748
Score = 379 (138.5 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 92/234 (39%), Positives = 128/234 (54%)
Query: 539 SDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAK 597
+DIG + D+ G + +I E V L++PQ + +G K P+G +L GPPGTGKTL+A+
Sbjct: 205 NDIG--YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIAR 262
Query: 598 ATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR 657
A A E F ++G E + G S +R F K+ P ILFIDEIDA+ KR
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT 322
Query: 658 NFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPD 717
N G E+ ++QLL MDG + +D AL R GRFDR+I + PD
Sbjct: 323 N--GEVERR-IVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPD 379
Query: 718 IKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
GR I ++H K +K D DL + +A GF GAD+A++C+EAAL R+
Sbjct: 380 AVGRLEILRIHTKNMKL-ADDVDLEQ-IANECHGFVGADLASLCSEAALQQIRE 431
Score = 67 (28.6 bits), Expect = 7.1e-42, Sum P(3) = 7.1e-42
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 136 SDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
+DIG + D+ G + +I E V L++PQ + +G K P+G +L
Sbjct: 205 NDIG--YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILL 249
Score = 47 (21.6 bits), Expect = 7.1e-42, Sum P(3) = 7.1e-42
Identities = 22/102 (21%), Positives = 45/102 (44%)
Query: 401 YGLIGS-VAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVV--NKKWVRVKLLPGN 457
+G +G+ +A L + + +++ D ++ + ++ L V N ++ + K P
Sbjct: 410 HGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSA 469
Query: 458 SMDGA----NFLWFNIGSVDSFERNL-ELAQAQMHIDPANYL 494
+ N W +IG + + +R L EL Q + P YL
Sbjct: 470 LREAVVETPNTTWSDIGGLQNVKRELQELVQYPVE-HPEKYL 510
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 449 (163.1 bits), Expect = 7.1e-42, Sum P(3) = 7.1e-42
Identities = 101/272 (37%), Positives = 151/272 (55%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + K E+ E V + +++P++Y+ G + +G + GPPG GKTLLAKA A E
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFG-GH 662
FI++ G E L M+ G + VRD+F AR APC+LF DE+D++ + RGG G G
Sbjct: 542 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGG 601
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
+ +NQ+L EMDG D++D A+LRPGR D+ I++P PD R
Sbjct: 602 GASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRH 661
Query: 723 SIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARD-LHTTIVMKH 780
I K L+ KT L +D DL+ LA T GF+GAD+ +C A +A R+ + I ++
Sbjct: 662 QILKASLR--KTPLSKDLDLTF-LAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEK 718
Query: 781 FEQAIERVVAGME-KKTNVLQPEEKKTVAYHE 811
Q +R G E + + + P + T A+ E
Sbjct: 719 ERQ--DRQARGEELMEDDAVDPVPEITRAHFE 748
Score = 379 (138.5 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 92/234 (39%), Positives = 128/234 (54%)
Query: 539 SDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAK 597
+DIG + D+ G + +I E V L++PQ + +G K P+G +L GPPGTGKTL+A+
Sbjct: 205 NDIG--YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIAR 262
Query: 598 ATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR 657
A A E F ++G E + G S +R F K+ P ILFIDEIDA+ KR
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT 322
Query: 658 NFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPD 717
N G E+ ++QLL MDG + +D AL R GRFDR+I + PD
Sbjct: 323 N--GEVERR-IVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPD 379
Query: 718 IKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
GR I ++H K +K D DL + +A GF GAD+A++C+EAAL R+
Sbjct: 380 AVGRLEILRIHTKNMKL-ADDVDLEQ-IANECHGFVGADLASLCSEAALQQIRE 431
Score = 67 (28.6 bits), Expect = 7.1e-42, Sum P(3) = 7.1e-42
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 136 SDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
+DIG + D+ G + +I E V L++PQ + +G K P+G +L
Sbjct: 205 NDIG--YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILL 249
Score = 47 (21.6 bits), Expect = 7.1e-42, Sum P(3) = 7.1e-42
Identities = 22/102 (21%), Positives = 45/102 (44%)
Query: 401 YGLIGS-VAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVV--NKKWVRVKLLPGN 457
+G +G+ +A L + + +++ D ++ + ++ L V N ++ + K P
Sbjct: 410 HGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSA 469
Query: 458 SMDGA----NFLWFNIGSVDSFERNL-ELAQAQMHIDPANYL 494
+ N W +IG + + +R L EL Q + P YL
Sbjct: 470 LREAVVETPNTTWSDIGGLQNVKRELQELVQYPVE-HPEKYL 510
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 452 (164.2 bits), Expect = 8.3e-42, P = 8.3e-42
Identities = 97/246 (39%), Positives = 138/246 (56%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E EI E V L +P+ Y ++G K PKG +L G PGTGKTLLAKA A +
Sbjct: 181 YSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 240
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ + GSE ++ ++G GP R +F +A ++AP I+FIDEIDA+G KR N GG
Sbjct: 241 SATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGER 300
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I PD+ +
Sbjct: 301 EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKK 360
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I +H K +L D L +GADI +C EA L+A R+ + + F+Q
Sbjct: 361 ILGIHTS--KMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQ 418
Query: 784 AIERVV 789
A ERV+
Sbjct: 419 AKERVM 424
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 452 (164.2 bits), Expect = 8.3e-42, P = 8.3e-42
Identities = 96/255 (37%), Positives = 140/255 (54%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + ++ G E E+ E + L NP+ + +G PKG +L GPPGTGKT
Sbjct: 122 MSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 714 PAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ + R I K+H P+ D D + L+ GF GAD+ NVC EA + A R H
Sbjct: 302 ELPNEQARLDILKIHSGPITKHGDID--YEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 774 TTIVMKHFEQAIERV 788
+ + F +A+ +V
Sbjct: 360 EYVTQEDFMKAVRKV 374
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 451 (163.8 bits), Expect = 8.5e-42, Sum P(3) = 8.5e-42
Identities = 98/271 (36%), Positives = 147/271 (54%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + K E+ E V + +++P++Y+ G + +G + GPPG GKTLLAKA A E
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
FI++ G E L M+ G + VRD+F AR APC+LF DE+D++ + RGG
Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG 600
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
+ +NQ+L EMDG D++D A+LRPGR D+ I++P PD R
Sbjct: 601 AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQ 660
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK L+ PL DLD + L++ T GF+GAD+ +C A +A R+ + +
Sbjct: 661 IFKASLRKTPLSADLDLNFLAKN----TVGFSGADLTEICQRACKLAIRESIEREIRQEK 716
Query: 782 EQAIERVVAGMEKKTNVL-QPEEKKTVAYHE 811
E+ +R G E + L P + T A+ E
Sbjct: 717 ERQ-DRSARGEELMEDELADPVPEITRAHFE 746
Score = 379 (138.5 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 88/231 (38%), Positives = 125/231 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ G + +I E V L++PQ + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F+ K++P ILFIDEIDA+ KR
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREK----A 321
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR+I + PD G
Sbjct: 322 HGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R I ++H K +K D D ++A GF GAD+A++C+EAA+ R+
Sbjct: 382 RLEILRIHTKNMKLGEDVD--LEQVANECHGFVGADLASLCSEAAIQQIRE 430
Score = 64 (27.6 bits), Expect = 8.5e-42, Sum P(3) = 8.5e-42
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ G + +I E V L++PQ + +G K P+G +L
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL 248
Score = 47 (21.6 bits), Expect = 8.5e-42, Sum P(3) = 8.5e-42
Identities = 22/102 (21%), Positives = 44/102 (43%)
Query: 401 YGLIGS-VAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVV--NKKWVRVKLLPGN 457
+G +G+ +A L + + +++ D ++ + ++ L V N ++ K P
Sbjct: 409 HGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSA 468
Query: 458 SMDGA----NFLWFNIGSVDSFERNL-ELAQAQMHIDPANYL 494
+ N W +IG + + +R L EL Q + P YL
Sbjct: 469 LREAVVETPNTTWSDIGGLQNVKRELQELVQYPVE-HPEKYL 509
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 451 (163.8 bits), Expect = 8.5e-42, Sum P(3) = 8.5e-42
Identities = 98/271 (36%), Positives = 147/271 (54%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G + K E+ E V + +++P++Y+ G + +G + GPPG GKTLLAKA A E
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
FI++ G E L M+ G + VRD+F AR APC+LF DE+D++ + RGG
Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG 600
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
+ +NQ+L EMDG D++D A+LRPGR D+ I++P PD R
Sbjct: 601 AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQ 660
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK L+ PL DLD + L++ T GF+GAD+ +C A +A R+ + +
Sbjct: 661 IFKASLRKTPLSADLDLNFLAKN----TVGFSGADLTEICQRACKLAIRESIEREIRQEK 716
Query: 782 EQAIERVVAGMEKKTNVL-QPEEKKTVAYHE 811
E+ +R G E + L P + T A+ E
Sbjct: 717 ERQ-DRSARGEELMEDELADPVPEITRAHFE 746
Score = 379 (138.5 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 88/231 (38%), Positives = 125/231 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ G + +I E V L++PQ + +G K P+G +L GPPGTGKTL+A+A A
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F+ K++P ILFIDEIDA+ KR
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREK----A 321
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR+I + PD G
Sbjct: 322 HGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R I ++H K +K D D ++A GF GAD+A++C+EAA+ R+
Sbjct: 382 RLEILRIHTKNMKLGEDVD--LEQVANECHGFVGADLASLCSEAAIQQIRE 430
Score = 64 (27.6 bits), Expect = 8.5e-42, Sum P(3) = 8.5e-42
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ G + +I E V L++PQ + +G K P+G +L
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL 248
Score = 47 (21.6 bits), Expect = 8.5e-42, Sum P(3) = 8.5e-42
Identities = 22/102 (21%), Positives = 44/102 (43%)
Query: 401 YGLIGS-VAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVV--NKKWVRVKLLPGN 457
+G +G+ +A L + + +++ D ++ + ++ L V N ++ K P
Sbjct: 409 HGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSA 468
Query: 458 SMDGA----NFLWFNIGSVDSFERNL-ELAQAQMHIDPANYL 494
+ N W +IG + + +R L EL Q + P YL
Sbjct: 469 LREAVVETPNTTWSDIGGLQNVKRELQELVQYPVE-HPEKYL 509
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 449 (163.1 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 95/258 (36%), Positives = 144/258 (55%)
Query: 547 DVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANV 605
D+ G E K E+ E V + +++P +++ G + +G + GPPG GKTLLAKA A E
Sbjct: 475 DIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 534
Query: 606 PFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQ 665
FI+V G E L M+ G + VRD+F AR APC+LF DE+D++ + RGG
Sbjct: 535 NFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAA 594
Query: 666 ENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRASIF 725
+ +NQ+L EMDG D++D A+LRPGR D+ I++P PD K R +I
Sbjct: 595 DRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAIL 654
Query: 726 KVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQA 784
K +L+ K+ L ++ DL+ +A +T GF+GAD+ +C A +A R + + E+A
Sbjct: 655 KANLR--KSPLAKEVDLTY-IAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERA 711
Query: 785 IERVVAGMEKKTNVLQPE 802
E + M+ + PE
Sbjct: 712 -ENQNSAMDMDEDDPVPE 728
Score = 392 (143.0 bits), Expect = 6.5e-33, P = 6.5e-33
Identities = 88/231 (38%), Positives = 127/231 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ GC + +I E V L++P + +G K P+G ++ GPPGTGKTL+A+A A
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K++P I+FIDEIDA+ KR
Sbjct: 258 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKT---- 313
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR+I + PD G
Sbjct: 314 HGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 373
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R + ++H K +K D DL + +AA + G GAD+A++C+EAAL R+
Sbjct: 374 RLEVLRIHTKNMKLH-DDVDLEQ-IAAESHGHVGADLASLCSEAALQQIRE 422
Score = 69 (29.3 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ GC + +I E V L++P + +G K P+G ++
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILM 240
Score = 42 (19.8 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 19/91 (20%), Positives = 42/91 (46%)
Query: 401 YGLIGS-VAVLAAAVMYEMNYKEITWKDFINNVLTKGIVEKLEVV--NKKWVRVKLLPG- 456
+G +G+ +A L + + +++ D ++ + ++ L V N ++ K P
Sbjct: 401 HGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSA 460
Query: 457 ---NSMDGANFLWFNIGSVDSFERNL-ELAQ 483
++ N W +IG ++S ++ L EL Q
Sbjct: 461 LRETVVEVPNTTWTDIGGLESVKKELQELVQ 491
Score = 41 (19.5 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 49 NFLWFNIGSVDSFERNL-ELAQ 69
N W +IG ++S ++ L EL Q
Sbjct: 470 NTTWTDIGGLESVKKELQELVQ 491
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 450 (163.5 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 98/253 (38%), Positives = 138/253 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ F V G E E+ E + LKNP+ ++ +G K PKG +L GPPGTGKTLLA+A A
Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
V F+ V S ++ ++G +R+MF A++H PC++F+DEIDA+G +R
Sbjct: 189 SLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSA 248
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL +LL +MDGF D LD ALLRPGR DR+I +P P+ GR
Sbjct: 249 DREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGR 308
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I K+HL+ + + D L LT G GAD+ NV EA IA ++ ++
Sbjct: 309 MEILKIHLEKVSKQGEID--YEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDL 366
Query: 782 EQAIERVVAGMEK 794
A R VA ++K
Sbjct: 367 MSAA-RKVADLKK 378
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 448 (162.8 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 95/255 (37%), Positives = 148/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ DV G ++ E++E + +K ++ D+G + PKGA++ GPPGTGKTLLA+A A +
Sbjct: 180 YSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQT 239
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
N F+ ++ + ++M++G G VRD F++A++ AP I+FIDE+DA+G KR G
Sbjct: 240 NATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDR 299
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF DVLD ALLR GR DR+I P P RA
Sbjct: 300 EVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQ 359
Query: 724 IFKVHLKPLKTDLDRDDLS-RKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I ++H + + TD DD++ ++LA T F GA + V EA +IA R+ +++ + F
Sbjct: 360 ILQIHSRKMTTD---DDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFV 416
Query: 783 QAIERVVAGMEKKTN 797
+ I V A K +
Sbjct: 417 EGISEVQARKSKSVS 431
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 435 (158.2 bits), Expect = 2.8e-41, Sum P(2) = 2.8e-41
Identities = 102/281 (36%), Positives = 151/281 (53%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E EI E V L +P+ Y ++G K PKG +L G PGTGKTLLAKA A +
Sbjct: 185 YADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 244
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ + GSE ++ ++G GP R +F +A HAP I+FIDEIDA+G KR GG
Sbjct: 245 SATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGGER 304
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF + LD AL+RPGR DR+I PD +
Sbjct: 305 EIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANTKKK 364
Query: 724 IFKVHLKPLKTDLDRDDLSR-KLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I +H K L DD++ ++ +GADI +C EA L+A R+ + + F+
Sbjct: 365 ILTIHTS--KMSL-ADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKAEDFK 421
Query: 783 QAIERVVAG-MEKKTNVLQPE-EKKTVAYHEAGHAVAGWFL 821
A ERV+ +E+ L + + T+ + V+ +FL
Sbjct: 422 SAKERVLKNKVEENLEGLNLQVHRNTIIVQQIFFFVSFFFL 462
Score = 38 (18.4 bits), Expect = 2.8e-41, Sum P(2) = 2.8e-41
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 250 VPKGFEKFYPDKNKKSAEKPKEEGKPSDS 278
+P G + K+ K EKPK E P +S
Sbjct: 8 IPGG-DNLNKKKDDKKKEKPKYE-PPVES 34
Score = 38 (18.4 bits), Expect = 2.8e-41, Sum P(2) = 2.8e-41
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 318 VPKGFEKFYPDKNKKSAEKPKEEGKPSDS 346
+P G + K+ K EKPK E P +S
Sbjct: 8 IPGG-DNLNKKKDDKKKEKPKYE-PPVES 34
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 445 (161.7 bits), Expect = 6.0e-41, Sum P(3) = 6.0e-41
Identities = 103/274 (37%), Positives = 150/274 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E K E+ E V + +++P+++ G KG + GPPG GKTLLAKA A
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ +RG
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDA 597
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+ LNQLL EMDG D++D ALLRPGR D+ I++P PD + R
Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 657
Query: 722 ASIFKVHLKPLKTDLDRD-DLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKH 780
IFK L+ K+ + +D DL R LA T GF+GADI +C + A R+ +
Sbjct: 658 YQIFKSCLR--KSPVAKDVDL-RALAKYTQGFSGADITEICQRSCKYAIRE--------N 706
Query: 781 FEQAIERVVAGMEKKTNVLQPEEKKTVAYHEAGH 814
E+ IE+ E + + EE+ +A +AGH
Sbjct: 707 IEKDIEKERKRAESPEAMEEDEEE--IAEIKAGH 738
Score = 383 (139.9 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 90/231 (38%), Positives = 125/231 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV G + +I E V L++PQ + +G K PKG +L GPPG+GKTL+A+A A
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDEID++ KR
Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT---- 320
Query: 662 HSEQENTL-NQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKG 720
H E E + +QLL MDG + +D AL R GRFDR+I + PD G
Sbjct: 321 HGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 380
Query: 721 RASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R + ++H K +K D D L R ++ T G+ GAD+A +C EAAL R+
Sbjct: 381 RLEVLRIHTKNMKLAEDVD-LER-VSKDTHGYVGADLAALCTEAALQCIRE 429
Score = 73 (30.8 bits), Expect = 6.0e-41, Sum P(3) = 6.0e-41
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + DV G + +I E V L++PQ + +G K PKG +L
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 247
Score = 37 (18.1 bits), Expect = 6.0e-41, Sum P(3) = 6.0e-41
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 463 NFLWFNIGSVDSFERNLE 480
N W +IG +++ +R L+
Sbjct: 477 NVSWEDIGGLENVKRELQ 494
Score = 37 (18.1 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 49 NFLWFNIGSVDSFERNLE 66
N W +IG +++ +R L+
Sbjct: 477 NVSWEDIGGLENVKRELQ 494
Score = 37 (18.1 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYS-ESTAQLIDNEVRSLISNAYTRTKA 950
FGM+ G + + P G+ +L K + E A I + L++ + ++A
Sbjct: 510 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 561
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 444 (161.4 bits), Expect = 6.1e-41, P = 6.1e-41
Identities = 94/254 (37%), Positives = 145/254 (57%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E+ E++E + + + +++ LG + PKG +L GPPGTGKTL+A+A A +
Sbjct: 170 YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 229
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
N F+ ++G + ++MF+G G VRD F +A++ APCI+FIDEIDA+G KR G
Sbjct: 230 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 289
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD AL+R GR DR+I P P + RA
Sbjct: 290 EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 349
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I ++H + K ++ D +LA T F GA + VC EA ++A R T + + F +
Sbjct: 350 ILQIHSR--KMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 407
Query: 784 AIERVVAGMEKKTN 797
I +V A + N
Sbjct: 408 GIIQVQAKKKASLN 421
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 443 (161.0 bits), Expect = 7.8e-41, P = 7.8e-41
Identities = 95/255 (37%), Positives = 148/255 (58%)
Query: 544 RFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
++ D+ GC++ E++E V + + ++++LG PKG ++ GPPGTGKT++A+A A +
Sbjct: 175 QYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQ 234
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
F+ ++G + ++MF+G G VRD F++A++ AP I+FIDE+DA+G KR G
Sbjct: 235 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGD 294
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E + T+ +LL ++DGF DVLD ALLR GR DR+I +P P+ RA
Sbjct: 295 REVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARA 354
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I ++H + K ++++D +LA T F GA VC EA +IA R T I+ + F
Sbjct: 355 RIMQIHSR--KMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFM 412
Query: 783 QAIERVVAGMEKKTN 797
AI V A + N
Sbjct: 413 DAILEVQAKKKASLN 427
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 443 (161.0 bits), Expect = 7.8e-41, P = 7.8e-41
Identities = 95/255 (37%), Positives = 148/255 (58%)
Query: 544 RFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
++ D+ GC++ E++E V + + ++++LG PKG ++ GPPGTGKT++A+A A +
Sbjct: 175 QYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQ 234
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
F+ ++G + ++MF+G G VRD F++A++ AP I+FIDE+DA+G KR G
Sbjct: 235 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGD 294
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E + T+ +LL ++DGF DVLD ALLR GR DR+I +P P+ RA
Sbjct: 295 REVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARA 354
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I ++H + K ++++D +LA T F GA VC EA +IA R T I+ + F
Sbjct: 355 RIMQIHSR--KMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFM 412
Query: 783 QAIERVVAGMEKKTN 797
AI V A + N
Sbjct: 413 DAILEVQAKKKASLN 427
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 442 (160.7 bits), Expect = 9.9e-41, P = 9.9e-41
Identities = 97/254 (38%), Positives = 146/254 (57%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G ++ E++E V +K ++ +LG K PKGA++ GPPGTGKTLLA+A A ++
Sbjct: 199 YSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQS 258
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
F+ ++ + ++MF+G G VRD F++A++ AP I+FIDE+DA+G KR + G
Sbjct: 259 GATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDR 318
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D LD ALLR GR DR+I P P + R S
Sbjct: 319 EVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARES 378
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
+ K+H + L D + + R+LA T F GA + V EA +IA R+ + I + F +
Sbjct: 379 VLKIHARKLHCDNNSVNW-RELARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKHEDFVE 437
Query: 784 AIERVVAGMEKKTN 797
AI V A K N
Sbjct: 438 AISEVQARKSKSVN 451
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 442 (160.7 bits), Expect = 9.9e-41, P = 9.9e-41
Identities = 95/258 (36%), Positives = 142/258 (55%)
Query: 537 NSSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLL 595
NS++ V + + G E ++ E V + NP Y +G K PKG +L GPPGTGKTLL
Sbjct: 129 NSTN-KVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLL 187
Query: 596 AKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG 655
A+A A N F+ + S ++ ++G +R+MF+ A++H PCI+F+DEIDA+G +R
Sbjct: 188 ARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRF 247
Query: 656 GRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPA 715
+ E + TL +LL +DGF DVLD AL+RPGR DR+I +P
Sbjct: 248 SQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPL 307
Query: 716 PDIKGRASIFKVHLKPLKT--DLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ R I K+H + D+D + + R L GF GAD+ NVC EA + A R +
Sbjct: 308 PNETARIEILKIHANKMTKLGDIDYESVCR----LCDGFNGADLRNVCTEAGMFAIRAMR 363
Query: 774 TTIVMKHFEQAIERVVAG 791
++ + F +A ++ G
Sbjct: 364 DYVIEEDFYKAARKISEG 381
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 442 (160.7 bits), Expect = 9.9e-41, P = 9.9e-41
Identities = 95/258 (36%), Positives = 142/258 (55%)
Query: 537 NSSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLL 595
NS++ V + + G E ++ E V + NP Y +G K PKG +L GPPGTGKTLL
Sbjct: 129 NSTN-KVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLL 187
Query: 596 AKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG 655
A+A A N F+ + S ++ ++G +R+MF+ A++H PCI+F+DEIDA+G +R
Sbjct: 188 ARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRF 247
Query: 656 GRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPA 715
+ E + TL +LL +DGF DVLD AL+RPGR DR+I +P
Sbjct: 248 SQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPL 307
Query: 716 PDIKGRASIFKVHLKPLKT--DLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLH 773
P+ R I K+H + D+D + + R L GF GAD+ NVC EA + A R +
Sbjct: 308 PNETARIEILKIHANKMTKLGDIDYESVCR----LCDGFNGADLRNVCTEAGMFAIRAMR 363
Query: 774 TTIVMKHFEQAIERVVAG 791
++ + F +A ++ G
Sbjct: 364 DYVIEEDFYKAARKISEG 381
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 441 (160.3 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 93/254 (36%), Positives = 145/254 (57%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E+ E++E + + + +Q+ LG + PKG +L GPPGTGKTL+A+A A +
Sbjct: 169 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 228
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
N F+ ++G + ++MF+G G VRD F +A++ +PCI+FIDEIDA+G KR G
Sbjct: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD AL+R GR DR+I P P + R
Sbjct: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGR 348
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I ++H + K +++ D +LA T F GA + VC EA ++A R T + + F +
Sbjct: 349 ILQIHSR--KMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
Query: 784 AIERVVAGMEKKTN 797
I +V A + N
Sbjct: 407 GIIQVQAKKKASLN 420
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 441 (160.3 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40
Identities = 92/230 (40%), Positives = 129/230 (56%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V ++D+ G E K E+ E V + +++P+++ G KG + GPPG GKTLLAKA A
Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E FI+V G E L M+ G + VR++F AR+ APC+LF DE+D++ +RG
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDA 596
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+ LNQLL EMDG D++D ALLRPGR D+ I++P PD R
Sbjct: 597 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSR 656
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
+IFK L+ K+ + +D LA T GF+GADI +C A A R+
Sbjct: 657 LNIFKACLR--KSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRE 704
Score = 387 (141.3 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 90/230 (39%), Positives = 126/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + DV G + +I E V L++PQ + +G K PKG +L GPPG+GKTL+A+A A
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDEID++ KR N G
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTN--G 321
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E+ ++QLL MDG + +D AL R GRFDR+I + PD GR
Sbjct: 322 EVERR-IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
+ ++H K +K D D L R ++ T G+ GAD+A +C EAAL R+
Sbjct: 381 LEVLRIHTKNMKLAEDVD-LER-ISKDTHGYVGADLAALCTEAALQCIRE 428
Score = 73 (30.8 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + DV G + +I E V L++PQ + +G K PKG +L
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 246
Score = 37 (18.1 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 463 NFLWFNIGSVDSFERNLE 480
N W +IG +++ +R L+
Sbjct: 476 NVSWEDIGGLENVKRELQ 493
Score = 37 (18.1 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 49 NFLWFNIGSVDSFERNLE 66
N W +IG +++ +R L+
Sbjct: 476 NVSWEDIGGLENVKRELQ 493
Score = 37 (18.1 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 900 FGMNEKVGNVSFDMPQPGEMVLEKPYS-ESTAQLIDNEVRSLISNAYTRTKA 950
FGM+ G + + P G+ +L K + E A I + L++ + ++A
Sbjct: 509 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 560
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 436 (158.5 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 99/267 (37%), Positives = 151/267 (56%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
VR++D+ G EE K E++E V + + +P+++ G +G + GPPGTGKT+LAKA A
Sbjct: 496 VRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 555
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR--NF 659
E FI+V G E L M+ G S +RD+F AR APC++F+DE+D++ + RGG +
Sbjct: 556 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDA 615
Query: 660 GGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIK 719
GG S++ +NQLL EMDG + LD AL+RPGR D ++VP PD
Sbjct: 616 GGASDR--VVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQA 673
Query: 720 GRASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIV 777
R I K L+ P+ +D+D + ++ K T GF+GAD+ V A +A ++ +
Sbjct: 674 SREGILKAQLRKTPVASDVDIEFIASK----THGFSGADLGFVTQRAVKLAIKES----I 725
Query: 778 MKHFEQAIERVVAGMEKKTNVLQPEEK 804
E+ +R AG + K ++ EE+
Sbjct: 726 SAEIERQKQREAAGEDVK---MEDEEE 749
Score = 399 (145.5 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 87/236 (36%), Positives = 131/236 (55%)
Query: 537 NSSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLL 595
N +++G + D+ GC + +I E V L++PQ + +G K P+G ++ GPPGTGKTL+
Sbjct: 218 NLNEVG--YDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLM 275
Query: 596 AKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG 655
A+A A E F ++G E + G S +R F A K++P I+FIDEID++ KR
Sbjct: 276 ARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKRE 335
Query: 656 GRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPA 715
N G E+ ++QLL MDG + +D AL R GRFDR++ +
Sbjct: 336 KTN--GEVERR-VVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGI 392
Query: 716 PDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
PD GR I +H K +K D D +AA T G+ G+D+A++C+EAA+ R+
Sbjct: 393 PDPTGRLEILSIHTKNMKLGEDVD--LETIAAETHGYVGSDLASLCSEAAMQQIRE 446
Score = 79 (32.9 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 134 NSSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
N +++G + D+ GC + +I E V L++PQ + +G K P+G ++
Sbjct: 218 NLNEVG--YDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILM 264
Score = 40 (19.1 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 881 GAEDDLKKVTQSAYAQVAH------FGMNEKVGNVSFDMPQPGEMVLEKPYS-ESTAQLI 933
G E+ +++ +S V H FG++ G + + P G+ +L K + E A I
Sbjct: 503 GLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFI 562
Query: 934 DNEVRSLIS 942
+ L+S
Sbjct: 563 SVKGPELLS 571
Score = 37 (18.1 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 463 NFLWFNIGSVDSFERNLELAQAQMHID 489
N W +IG ++ +R L + Q +D
Sbjct: 495 NVRWEDIGGLEEVKREL-IESVQYPVD 520
Score = 37 (18.1 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 49 NFLWFNIGSVDSFERNLELAQAQMHID 75
N W +IG ++ +R L + Q +D
Sbjct: 495 NVRWEDIGGLEEVKREL-IESVQYPVD 520
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 439 (159.6 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 93/246 (37%), Positives = 132/246 (53%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + ++ G E+ E V L P+ +I +G K PKG +L GPPGTGKTLLA+A A
Sbjct: 134 VSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIAS 193
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
F+ V S ++ ++G +R+MF AR H PC++F+DEIDA+G +R
Sbjct: 194 NLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSA 253
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL +LL +MDGF DVLD ALLRPGR DR+I +P P+ GR
Sbjct: 254 DREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGR 313
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
+ K+H + D D +A L GF AD+ NVC EA + A R ++ + F
Sbjct: 314 VDVLKIHAANITKHGDVD--YEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDF 371
Query: 782 EQAIER 787
+A+ +
Sbjct: 372 MKAVRK 377
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 438 (159.2 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 94/256 (36%), Positives = 149/256 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G ++ +++E + + + +++ +G K PKG ++ GPPGTGKTLLA+A A +
Sbjct: 185 YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQT 244
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
N F+ ++G + ++MF+G G VRD F++A++ AP I+FIDE+DA+G KR G
Sbjct: 245 NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDR 304
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D LD ALLR GR DR+I +P P+ + RA
Sbjct: 305 EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRAR 364
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I ++H + K ++ +D +LA T F GA + VC EA +IA R T I H E
Sbjct: 365 ILQIHSR--KMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEI--DH-ED 419
Query: 784 AIERVVAGMEKKTNVL 799
+E + + + KK + L
Sbjct: 420 FVEGITSVLSKKKSTL 435
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 438 (159.2 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 94/256 (36%), Positives = 149/256 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G ++ +++E + + + +++ +G K PKG ++ GPPGTGKTLLA+A A +
Sbjct: 185 YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQT 244
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
N F+ ++G + ++MF+G G VRD F++A++ AP I+FIDE+DA+G KR G
Sbjct: 245 NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDR 304
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D LD ALLR GR DR+I +P P+ + RA
Sbjct: 305 EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRAR 364
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
I ++H + K ++ +D +LA T F GA + VC EA +IA R T I H E
Sbjct: 365 ILQIHSR--KMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEI--DH-ED 419
Query: 784 AIERVVAGMEKKTNVL 799
+E + + + KK + L
Sbjct: 420 FVEGITSVLSKKKSTL 435
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 438 (159.2 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 90/247 (36%), Positives = 137/247 (55%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ + V G + E+ E + L NP+ ++ +G K PKG +L GPPGTGKTLLA+A A
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ F+ V S ++ ++G +R+MF+ AR+H PCI+F+DEIDA+G +R
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL +LL ++DGF DVLD ALLRPGR DR+I +P P+ + R
Sbjct: 256 DREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I K+H + + D + L GF GAD+ N+C EA + A R ++ + F
Sbjct: 316 MDILKIHAAGIAKHGEID--YEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDF 373
Query: 782 EQAIERV 788
+A+ ++
Sbjct: 374 MKAVRKL 380
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 430 (156.4 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 96/234 (41%), Positives = 131/234 (55%)
Query: 541 IGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKAT 599
+ V + DV G +E K E+ E V + + +P QY G KG + GPPGTGKTLLAKA
Sbjct: 482 VNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAV 541
Query: 600 AGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGR-- 657
A E + FI+V G E L M+ G S +RD+F AR AP ++F+DE+D++ + RGG
Sbjct: 542 ATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLG 601
Query: 658 NFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPD 717
+ GG S++ +NQLL EMDG D +D A+LRPGR D+ I+VP PD
Sbjct: 602 DAGGASDR--VVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPD 659
Query: 718 IKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
R SI L+ KT L+ +A T GF+GAD+ + AA A +D
Sbjct: 660 ENARLSILNAQLR--KTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKD 711
Score = 412 (150.1 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 91/236 (38%), Positives = 133/236 (56%)
Query: 537 NSSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLL 595
N +++G + D+ GC + +I E V L++PQ + +G K P+G ++ GPPGTGKTL+
Sbjct: 207 NMNEVG--YDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLM 264
Query: 596 AKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRG 655
A+A A E F ++G E + G S +R F A K+AP I+FIDEID++ KR
Sbjct: 265 ARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRD 324
Query: 656 GRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPA 715
N G E+ ++QLL MDG + +D AL R GRFDR++ +
Sbjct: 325 KTN--GEVERR-VVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGI 381
Query: 716 PDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
PD GR + ++H K +K D DL LAA T G+ GADIA++C+EAA+ R+
Sbjct: 382 PDATGRLEVLRIHTKNMKL-ADDVDLEA-LAAETHGYVGADIASLCSEAAMQQIRE 435
Score = 79 (32.9 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 134 NSSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
N +++G + D+ GC + +I E V L++PQ + +G K P+G ++
Sbjct: 207 NMNEVG--YDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLM 253
Score = 44 (20.5 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 896 QVAHFGMNEKVGNVSFDMPQPGEMVLEKPYS-ESTAQLIDNEVRSLISNAYTRTKA 950
Q FG++ G + + P G+ +L K + E +A I + L+S Y +++
Sbjct: 512 QYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 567
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 437 (158.9 bits), Expect = 3.4e-40, P = 3.4e-40
Identities = 92/249 (36%), Positives = 141/249 (56%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + ++ G + E+ E + L NP ++ +G PKG +L GPPGTGKTLLA+A A
Sbjct: 139 VNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIAS 198
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +R
Sbjct: 199 QMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSA 258
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL +LL +MDGF D LD ALLRPGR DR++ +P P+ R
Sbjct: 259 DREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVAR 318
Query: 722 ASIFKVHLKPL--KTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMK 779
I K+H +PL + ++D + + KL+ L F GAD+ N+C EA L A R ++ +
Sbjct: 319 MDILKIHAEPLNKRGEIDYEAVV-KLSDL---FNGADLRNICTEAGLFALRCDREFVIQE 374
Query: 780 HFEQAIERV 788
F +A+ ++
Sbjct: 375 DFMKAVRKI 383
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 437 (158.9 bits), Expect = 3.4e-40, P = 3.4e-40
Identities = 90/247 (36%), Positives = 137/247 (55%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ + V G + E+ E + L NP+ ++ +G K PKG +L GPPGTGKTLLA+A A
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ F+ V S ++ ++G +R+MF+ AR+H PCI+F+DEIDA+G +R
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL +LL ++DGF DVLD ALLRPGR DR+I +P P+ + R
Sbjct: 256 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I K+H + + D + L GF GAD+ N+C EA + A R ++ + F
Sbjct: 316 MEILKIHASGIAKHGEID--YEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDF 373
Query: 782 EQAIERV 788
+A+ ++
Sbjct: 374 MKAVRKL 380
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 436 (158.5 bits), Expect = 4.4e-40, P = 4.4e-40
Identities = 92/247 (37%), Positives = 134/247 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ F + G + E+ E + LKNP+ + +G K PKG +L GPPGTGKTLLA+A A
Sbjct: 134 INFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVAS 193
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
F+ V S ++ ++G +R+MF A++H PCI+F+DEIDA+G +R
Sbjct: 194 SMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSA 253
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL +LL ++DGF D LD ALLR GR DR+I +P P+ GR
Sbjct: 254 DREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGR 313
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I K+H ++ + D D S + ++ G GAD+ NV EA L A +D I F
Sbjct: 314 LEILKIHSSTVQMEGDIDFES--VVKMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDDF 371
Query: 782 EQAIERV 788
+A+ +V
Sbjct: 372 NRAVRKV 378
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 436 (158.5 bits), Expect = 4.4e-40, P = 4.4e-40
Identities = 91/247 (36%), Positives = 135/247 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + V G + E+ E + L NP+ ++ +G K PKG +L GPPGTGKTLLA+A A
Sbjct: 137 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 196
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
+ F+ + S ++ ++G +R+MF AR H PCI+F+DEIDA+G +R
Sbjct: 197 NIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 256
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL +LL ++DGF DVLD ALLRPGR DR+I +P P+ + R
Sbjct: 257 DREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQAR 316
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
+ K+H + + D + L GF GAD+ NVC EA + A R +V + F
Sbjct: 317 MEVLKIHAAGIAKHGEID--YEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDF 374
Query: 782 EQAIERV 788
+A+ ++
Sbjct: 375 MKAVRKL 381
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 436 (158.5 bits), Expect = 4.4e-40, P = 4.4e-40
Identities = 97/259 (37%), Positives = 137/259 (52%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ F + G E E+ E + LKNP+ + +G K PKG +L GPPGTGKTLLAKA A
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
FI S ++ ++G +R+MF+ A++H PCI+F+DE+DA+G +R
Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL +LL +MDGF D LD ALLRPGR DR++ +P P+ GR
Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGR 357
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H +K + D ++ GF GADI N EA A RD I
Sbjct: 358 LEIFKIHTAKVKKTGEFD--FEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDL 415
Query: 782 EQAIERVVAGMEKKTNVLQ 800
+A+ R VA ++K ++
Sbjct: 416 MKAV-RKVAEVKKLEGTIE 433
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 436 (158.5 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 87/230 (37%), Positives = 131/230 (56%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
++D+ G E K E+ E V + +++P+++ G + KG + GPPG GKTLLAKA A E
Sbjct: 474 WEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANEC 533
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
FI++ G E L M+ G + VR++F AR+ APC+LF DE+D++ R RG
Sbjct: 534 QANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGG 593
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
+ +NQ+L EMDG D++D A+LRPGR D+ I++P PD+ R +
Sbjct: 594 AGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVA 653
Query: 724 IFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
I K L P+ D+D + L +K T GF+GAD+ +C A +A R+
Sbjct: 654 ILKACLNKSPVAKDVDLEFLGQK----TQGFSGADLTEICQRACKLAIRE 699
Score = 378 (138.1 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 87/230 (37%), Positives = 125/230 (54%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ G + +I E V L++PQ + ++G K PKG +L GPPG GKT++A+A A
Sbjct: 199 VGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVAN 258
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E F ++G E + G S +R F A K+AP I+FIDEID++ KR G
Sbjct: 259 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTQG 316
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E+ ++QLL MDG + +D AL R GRFDR+I + PD GR
Sbjct: 317 EVERR-IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGR 375
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
I ++H K +K D + DL +A T G+ GAD+A +C E+AL R+
Sbjct: 376 LEIMRIHTKNMKLD-ETVDLEA-VANETHGYVGADLAALCTESALQCIRE 423
Score = 69 (29.3 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 140 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
V + D+ G + +I E V L++PQ + ++G K PKG +L
Sbjct: 199 VGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILL 241
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 435 (158.2 bits), Expect = 5.7e-40, P = 5.7e-40
Identities = 98/256 (38%), Positives = 141/256 (55%)
Query: 530 ESTAKLINSSDI-GVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGP 587
+S+ L++ S+ V + D+ GC+ K EI E V L + + Y +G P+G +L GP
Sbjct: 138 DSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGP 197
Query: 588 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEI 647
PGTGKT+LAKA A FI V GSEF++ ++G GP VRD+F +A+++AP I+FIDE+
Sbjct: 198 PGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEV 257
Query: 648 DAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRF 707
DA+ R G E + L +LL +MDGF D LD ALLRPGR
Sbjct: 258 DAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRL 317
Query: 708 DRQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALI 767
DR+I P PD + + +F+V + D DL ++ + A+IA +C EA +
Sbjct: 318 DRKIEFPLPDRRQKRLVFQVCTSKMNLS-DEVDLEDYVSR-PDKISAAEIAAICQEAGMH 375
Query: 768 AARDLHTTIVMKHFEQ 783
A R I+ K FE+
Sbjct: 376 AVRKNRYVILPKDFEK 391
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 434 (157.8 bits), Expect = 7.2e-40, P = 7.2e-40
Identities = 96/257 (37%), Positives = 143/257 (55%)
Query: 536 INSSDIG-VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKT 593
++ D G V + + G + E+ E + L NP+ ++ +G PKG +L GPPGTGKT
Sbjct: 130 MSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKT 189
Query: 594 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRK 653
LLA+A A + + F+ V S ++ ++G +R+MF+ AR H PCI+F+DEIDA+G +
Sbjct: 190 LLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 249
Query: 654 RGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFV 713
R E + TL +LL +MDGF D LD ALLRPGR DR+I +
Sbjct: 250 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEI 309
Query: 714 PAPDIKGRASIFKVH-LKPLKT-DLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
P P+ + R I K+H LK K ++D + + + L+ F GAD+ NVC EA L A R
Sbjct: 310 PLPNEQARLEILKIHALKIAKHGEIDYEAIVK----LSDNFNGADLRNVCTEAGLFAIRA 365
Query: 772 LHTTIVMKHFEQAIERV 788
++ F +A+ +V
Sbjct: 366 EREYVIQGDFMKAVRKV 382
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 434 (157.8 bits), Expect = 7.2e-40, P = 7.2e-40
Identities = 94/259 (36%), Positives = 146/259 (56%)
Query: 544 RFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
R+ D+ G + E+ E + ++ ++ LG K PKG ++ GPPGTGKTLLA+A A +
Sbjct: 183 RYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQ 242
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
+N F+ ++ + ++MF+G G VRD F++A++ +P I+FIDE+DA+G KR G
Sbjct: 243 SNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGD 302
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E + T+ +LL ++DGF D LD ALLR GR DR++ P P+ + R
Sbjct: 303 REVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARV 362
Query: 723 SIFKVHLKPLKTDLDRDDLS-RKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I ++H + + D DD++ +LA T + GA + +VC EA +IA R T I +HF
Sbjct: 363 GILRIHSRKMAID---DDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHF 419
Query: 782 EQAIERVVAGMEKKTNVLQ 800
I V +K+ LQ
Sbjct: 420 MDGILEV---QMRKSKTLQ 435
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 434 (157.8 bits), Expect = 7.2e-40, P = 7.2e-40
Identities = 98/252 (38%), Positives = 137/252 (54%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
F D+ GCE E+ E V L +P+ Y ++G PKG +L G PGTGKTLLAKA A
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANST 241
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ FI +GS+ ++ G G VR +F MA++ AP I+FIDEIDAVG KR + G
Sbjct: 242 SATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQ 301
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + TL +LL ++DGF D LD AL+RPGR DR+I +P PD K R
Sbjct: 302 EVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQK 361
Query: 724 IFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFEQ 783
IF +H + + + + +GA+I VC EA ++A R + FE+
Sbjct: 362 IFTIHTSGMT--IQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFEK 419
Query: 784 AIERVVAGMEKK 795
A++ V+ + KK
Sbjct: 420 AVKSVM--LSKK 429
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 456 (165.6 bits), Expect = 7.5e-40, Sum P(3) = 7.5e-40
Identities = 99/251 (39%), Positives = 145/251 (57%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ G E K+++ + V + LK+P+ +I +G + PKG +L GPPG KT++AKA A
Sbjct: 624 VSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAN 683
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E+ + F+ + G E + +VG VR+ F AR AP I+F DE+DA+ +RG + G
Sbjct: 684 ESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGS-SLGA 742
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+ + L QLL EMDG D +DKAL+RPGR DR I+VP PD R
Sbjct: 743 GNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATR 802
Query: 722 ASIFKV--HLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAAR-DLHTTIVM 778
IFK+ H P+ ++D D+L + T ++GA+I VC EAAL+A D+ ++M
Sbjct: 803 REIFKLQFHSMPVSNEVDLDELILQ----TDAYSGAEIVAVCREAALLALEEDIQANLIM 858
Query: 779 K-HFEQAIERV 788
K HF QA+ V
Sbjct: 859 KRHFTQALSTV 869
Score = 307 (113.1 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 80/242 (33%), Positives = 124/242 (51%)
Query: 537 NSSDIGVRFK---DVAGCEEAKVE-IMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTG 591
NS + +FK D+ G ++++ I E + LK P+ + G P+G +L GPPGTG
Sbjct: 340 NSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTG 399
Query: 592 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVG 651
KT++A+A A E ++G E + F G +++R +F+ A P I+FIDE+DA+
Sbjct: 400 KTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALC 459
Query: 652 RKRGGRNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXD---VLDKALLRPGRFD 708
KR G + ++ + LL MDG + LD AL RPGRFD
Sbjct: 460 PKREGAQ---NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFD 516
Query: 709 RQIFVPAPDIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIA 768
++I + P+ + R I + L+ + L +L + LA G+ GAD+ +CNEA L A
Sbjct: 517 KEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQ-LANSAHGYVGADLKVLCNEAGLCA 575
Query: 769 AR 770
R
Sbjct: 576 LR 577
Score = 46 (21.3 bits), Expect = 7.5e-40, Sum P(3) = 7.5e-40
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 134 NSSDIGVRFK---DVAGCEEAKVE-IMEFVNF-LKNPQQYIDLGAKIPKGAML 181
NS + +FK D+ G ++++ I E + LK P+ + G P+G +L
Sbjct: 340 NSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLL 392
Score = 45 (20.9 bits), Expect = 7.5e-40, Sum P(3) = 7.5e-40
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 441 LEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELA 482
L+ +N +R + ++D N W +IG ++S + LE A
Sbjct: 603 LQAMND--IRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQA 642
Score = 45 (20.9 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 27 LEVVNKKWVRVKLLPGNSMDGANFLWFNIGSVDSFERNLELA 68
L+ +N +R + ++D N W +IG ++S + LE A
Sbjct: 603 LQAMND--IRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQA 642
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 433 (157.5 bits), Expect = 9.3e-40, P = 9.3e-40
Identities = 98/262 (37%), Positives = 137/262 (52%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
+ F + G E E+ E + LKNP+ + +G K PKG +L GPPGTGKTLLAKA A
Sbjct: 169 ISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 228
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
FI S ++ ++G +R+MF+ A++H PCI+F+DE+DA+G +R
Sbjct: 229 TIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 288
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + TL +LL +MDGF D LD ALLR GR DR+I + P+ GR
Sbjct: 289 DREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGR 348
Query: 722 ASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
IFK+H + + D ++ GF GADI NV EA A RD I+
Sbjct: 349 LEIFKIHTSKVAKQGEFD--FEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDL 406
Query: 782 EQAIERVVAGMEKKTNVLQPEE 803
+A+ R VA ++K L E+
Sbjct: 407 MKAV-RKVADVKKLEGKLDYEK 427
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 433 (157.5 bits), Expect = 9.3e-40, P = 9.3e-40
Identities = 94/256 (36%), Positives = 148/256 (57%)
Query: 544 RFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
++ D+ G ++ E++E + + + +++ +LG + PKG ++ GPPGTGKTLLA+A A +
Sbjct: 149 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 208
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
F+ ++G + ++MF+G G VRD FS+A++ AP I+FIDE+DA+G KR G
Sbjct: 209 TKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGD 268
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E + T+ +LL ++DGF D+LD ALLR GR DR+I P P+ + RA
Sbjct: 269 REVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 328
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I ++H + K ++ D +LA T F GA VC EA +IA R T + + +
Sbjct: 329 RIMQIHSR--KMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYM 386
Query: 783 QAIERVVAGMEKKTNV 798
+ I V A +KK N+
Sbjct: 387 EGILEVQA--KKKANL 400
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 427 (155.4 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 94/232 (40%), Positives = 132/232 (56%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
VR++D+ G EE K E+ E V + ++++ G KG + GPPGTGKTLLAKA A
Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIAN 553
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
E + FI+V G E L M+ G S VRD+F AR APC++F+DE+D++ + RG + G
Sbjct: 554 ECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGA-SAGD 612
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
+ +NQLL EMDG D +D AL+RPGR D+ I+VP PD + R
Sbjct: 613 SGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEAR 672
Query: 722 ASIFKVHLK--PLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
SI + L+ P+ D+D R +A T GF+GAD+ V A +A +D
Sbjct: 673 FSILQTQLRHTPVAEDVDL----RAVAKATHGFSGADLEFVVQRAVKLAIKD 720
Score = 401 (146.2 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 90/235 (38%), Positives = 131/235 (55%)
Query: 538 SSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLA 596
SS V + D+ GC +I E V L++PQ + +G K P+G ++ GPPGTGKTL+A
Sbjct: 216 SSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMA 275
Query: 597 KATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGG 656
+A A E F ++G E + G S +R F A K++P I+FIDEID++ KR
Sbjct: 276 RAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK 335
Query: 657 RNFGGHSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAP 716
N G E+ ++QLL MDG + +D AL R GRFDR++ V P
Sbjct: 336 TN--GEVERR-VVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIP 392
Query: 717 DIKGRASIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARD 771
D GR I ++H K +K D DL + +AA T G+ G+D+A++C+EAA+ R+
Sbjct: 393 DPTGRLEILRIHTKNMKL-ADDVDLEQ-IAAETHGYVGSDLASLCSEAAMQQIRE 445
Score = 76 (31.8 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 135 SSDIGVRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAML 181
SS V + D+ GC +I E V L++PQ + +G K P+G ++
Sbjct: 216 SSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILM 263
Score = 43 (20.2 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 885 DLKKVTQSA--YAQ-VAHFGMNEKVGNVSFDMPQPGEMVLEKPYS-ESTAQLIDNEVRSL 940
+L++ Q YA+ FG+ G + F P G+ +L K + E +A I + L
Sbjct: 508 ELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPEL 567
Query: 941 IS 942
+S
Sbjct: 568 LS 569
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 432 (157.1 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 92/255 (36%), Positives = 148/255 (58%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G ++ E++E V + + +++ +G K PKG ++ GPPGTGKTLLA+A A +
Sbjct: 167 YSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQT 226
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
N ++ ++G + ++MF+G G VRD F++A++ P I+FIDE+DA+G KR G
Sbjct: 227 NSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDR 286
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRAS 723
E + T+ +LL ++DGF D+LD ALLR GR DR+I P P+ + RA
Sbjct: 287 EVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAH 346
Query: 724 IFKVHLKPLKT--DLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHF 781
I ++H + + D++ D+L+R + F GA + VC EA +IA R T ++ F
Sbjct: 347 ILQIHSRKMNVSADVNFDELARS----SEDFNGAQLKAVCVEAGMIALRRGGTELIHNDF 402
Query: 782 EQAIERVVAGMEKKT 796
+ V+A +KKT
Sbjct: 403 VEGCVEVMA-KKKKT 416
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 432 (157.1 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 97/247 (39%), Positives = 137/247 (55%)
Query: 545 FKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 603
+ D+ G E EI E V L +P+ Y ++G K PKG +L G PGTGKTLLAKA A +
Sbjct: 190 YADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 249
Query: 604 NVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGHS 663
+ F+ V GSE ++ ++G GP VR +F+ A +H+P I+FIDEIDA+G KR G
Sbjct: 250 SATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAER 309
Query: 664 EQENTLNQLLVEMDGFXXXXXXXXXXXXXXX-DVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E + T+ +LL ++DGF LD AL+RPGR DR+I PD +
Sbjct: 310 EIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKR 369
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
IF +H K +L D +L +GA+I + +EA L+A R+ +VM F
Sbjct: 370 KIFTIHTS--KMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFR 427
Query: 783 QAIERVV 789
QA E+V+
Sbjct: 428 QAREKVL 434
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 428 (155.7 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 93/256 (36%), Positives = 148/256 (57%)
Query: 544 RFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
++ D+ G ++ E++E + + + +++ +LG + PKG ++ GPPGTGKTLLA+A A +
Sbjct: 130 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 189
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
F+ ++G + ++MF+G G VRD F++A++ AP I+FIDE+DA+G KR G
Sbjct: 190 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 249
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E + T+ +LL ++DGF D+LD ALLR GR DR+I P P+ + RA
Sbjct: 250 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 309
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I ++H + K ++ D +LA T F GA VC EA +IA R T + + +
Sbjct: 310 RIMQIHSR--KMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 367
Query: 783 QAIERVVAGMEKKTNV 798
+ I V A +KK N+
Sbjct: 368 EGILEVQA--KKKANL 381
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 428 (155.7 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 93/256 (36%), Positives = 148/256 (57%)
Query: 544 RFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 602
++ D+ G ++ E++E + + + +++ +LG + PKG ++ GPPGTGKTLLA+A A +
Sbjct: 134 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 193
Query: 603 ANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGGH 662
F+ ++G + ++MF+G G VRD F++A++ AP I+FIDE+DA+G KR G
Sbjct: 194 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 253
Query: 663 SEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGRA 722
E + T+ +LL ++DGF D+LD ALLR GR DR+I P P+ + RA
Sbjct: 254 REVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 313
Query: 723 SIFKVHLKPLKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMKHFE 782
I ++H + K ++ D +LA T F GA VC EA +IA R T + + +
Sbjct: 314 RIMQIHSR--KMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 371
Query: 783 QAIERVVAGMEKKTNV 798
+ I V A +KK N+
Sbjct: 372 EGILEVQA--KKKANL 385
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 428 (155.7 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 96/256 (37%), Positives = 141/256 (55%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ G + K E+ E V L + + Y +G P+G ++ GPPG GKT+LAKA A
Sbjct: 161 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 220
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
FI V GSEF++ ++G GP VRD+F +A+++AP I+FIDEIDA+ KR G
Sbjct: 221 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 280
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + L +LL +MDGF D LD ALLRPGR DR+I P PD + +
Sbjct: 281 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 340
Query: 722 ASIFKVHLKP--LKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMK 779
IF L ++D +D A +GADI ++C E+ ++A R+ ++ K
Sbjct: 341 RLIFSTITSKMNLSEEVDLEDY----VARPDKISGADINSICQESGMLAVRENRYIVLAK 396
Query: 780 HFEQAIERVVAGMEKK 795
FE+A + V+ E++
Sbjct: 397 DFEKAYKTVIKKDEQE 412
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 428 (155.7 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 96/256 (37%), Positives = 141/256 (55%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ G + K E+ E V L + + Y +G P+G ++ GPPG GKT+LAKA A
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
FI V GSEF++ ++G GP VRD+F +A+++AP I+FIDEIDA+ KR G
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + L +LL +MDGF D LD ALLRPGR DR+I P PD + +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341
Query: 722 ASIFKVHLKP--LKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMK 779
IF L ++D +D A +GADI ++C E+ ++A R+ ++ K
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDY----VARPDKISGADINSICQESGMLAVRENRYIVLAK 397
Query: 780 HFEQAIERVVAGMEKK 795
FE+A + V+ E++
Sbjct: 398 DFEKAYKTVIKKDEQE 413
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 428 (155.7 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 96/256 (37%), Positives = 141/256 (55%)
Query: 543 VRFKDVAGCEEAKVEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAG 601
V + D+ G + K E+ E V L + + Y +G P+G ++ GPPG GKT+LAKA A
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 602 EANVPFITVSGSEFLEMFVGVGPSRVRDMFSMARKHAPCILFIDEIDAVGRKRGGRNFGG 661
FI V GSEF++ ++G GP VRD+F +A+++AP I+FIDEIDA+ KR G
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281
Query: 662 HSEQENTLNQLLVEMDGFXXXXXXXXXXXXXXXDVLDKALLRPGRFDRQIFVPAPDIKGR 721
E + L +LL +MDGF D LD ALLRPGR DR+I P PD + +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341
Query: 722 ASIFKVHLKP--LKTDLDRDDLSRKLAALTPGFTGADIANVCNEAALIAARDLHTTIVMK 779
IF L ++D +D A +GADI ++C E+ ++A R+ ++ K
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDY----VARPDKISGADINSICQESGMLAVRENRYIVLAK 397
Query: 780 HFEQAIERVVAGMEKK 795
FE+A + V+ E++
Sbjct: 398 DFEKAYKTVIKKDEQE 413
WARNING: HSPs involving 431 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1036 909 0.00089 122 3 11 22 0.42 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 681
No. of states in DFA: 618 (66 KB)
Total size of DFA: 413 KB (2197 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 74.68u 0.12s 74.80t Elapsed: 00:00:05
Total cpu time: 74.75u 0.13s 74.88t Elapsed: 00:00:05
Start: Thu Aug 15 12:05:08 2013 End: Thu Aug 15 12:05:13 2013
WARNINGS ISSUED: 2