BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5448
(322 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24535|SRF_DROME Serum response factor homolog OS=Drosophila melanogaster GN=bs PE=1
SV=2
Length = 449
Score = 254 bits (650), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 138/172 (80%), Gaps = 8/172 (4%)
Query: 85 RGLKRTSDMCYEHDGRSS-------MTNLTGDCGSDIVDEGYSPSTQKGSPPSNGKKTKG 137
RGLKR+ CYE RSS + N+ D VD Y+P K SPP+NGKKTKG
Sbjct: 108 RGLKRSGSDCYEDHHRSSGGLTLQGLDNVASGAVDDSVDN-YNPLPNKKSPPANGKKTKG 166
Query: 138 RVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKL 197
RVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKL
Sbjct: 167 RVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKL 226
Query: 198 QPMITSEAGKALIQTCLNSPDPCPSGAGDQRMSATGFEETELSYNIGDDEQK 249
QPMITSEAGK LIQTCLNSPDP G GDQRMSATGFEETELSYNI D++ K
Sbjct: 227 QPMITSEAGKQLIQTCLNSPDPPSVGGGDQRMSATGFEETELSYNIADEDSK 278
>sp|P11831|SRF_HUMAN Serum response factor OS=Homo sapiens GN=SRF PE=1 SV=1
Length = 508
Score = 207 bits (527), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 124/167 (74%), Gaps = 10/167 (5%)
Query: 84 QRGLKRT-SDMCYEHDGRSSMTNLTGDCGSDIVDEGYSPSTQKGSPPSNGKKTKGRVKIK 142
+RGLKR+ S+M + G S GY P + S GKKT+GRVKIK
Sbjct: 95 RRGLKRSLSEMEIGM-------VVGGPEASAAATGGYGPVSGAVSGAKPGKKTRGRVKIK 147
Query: 143 MEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMIT 202
ME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQV+LLVASETGHVYTFATRKLQPMIT
Sbjct: 148 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMIT 207
Query: 203 SEAGKALIQTCLNSPDPCPSG--AGDQRMSATGFEETELSYNIGDDE 247
SE GKALIQTCLNSPD P DQRMSATGFEET+L+Y + + +
Sbjct: 208 SETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESD 254
>sp|Q90718|SRF_CHICK Serum response factor (Fragment) OS=Gallus gallus GN=SRF PE=2 SV=1
Length = 375
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 129 PSNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGH 188
P GKKT+GRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQV+LLVASETGH
Sbjct: 1 PPPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGH 60
Query: 189 VYTFATRKLQPMITSEAGKALIQTCLNSPDPCPSG--AGDQRMSATGFEETELSYNIGDD 246
VYTFATRKLQPMITSE GKALIQTCLNSPD P DQRMSATGFEET+L+Y + +
Sbjct: 61 VYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSES 120
Query: 247 E 247
+
Sbjct: 121 D 121
>sp|P23790|SRF_XENLA Serum response factor OS=Xenopus laevis GN=srf PE=2 SV=1
Length = 448
Score = 204 bits (520), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 123/167 (73%), Gaps = 17/167 (10%)
Query: 85 RGLKRTSDMCY--EHDGRSSMTNLTGDCGSDIVDEGYSPSTQKGSPPSNGKKTKGRVKIK 142
RG+KR + E G + + G G T G+ P GKKT+GRVKIK
Sbjct: 56 RGIKRGLNELELPEQGGAAGVVGYPGASG-----------TVSGAKP--GKKTRGRVKIK 102
Query: 143 MEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMIT 202
ME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQV+LLVASETGHVYTFATRKLQPMIT
Sbjct: 103 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMIT 162
Query: 203 SEAGKALIQTCLNSPDPCPSG--AGDQRMSATGFEETELSYNIGDDE 247
SE GKALIQTCLNSPD P + DQRMSATGFEET+L+Y + + +
Sbjct: 163 SETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESD 209
>sp|Q9JM73|SRF_MOUSE Serum response factor OS=Mus musculus GN=Srf PE=1 SV=1
Length = 504
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/118 (82%), Positives = 105/118 (88%), Gaps = 2/118 (1%)
Query: 132 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYT 191
GKKT+GRVKIKME+IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQV+LLVASETGHVYT
Sbjct: 133 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 192
Query: 192 FATRKLQPMITSEAGKALIQTCLNSPDPCPSG--AGDQRMSATGFEETELSYNIGDDE 247
FATRKLQPMITSE GKALIQTCLNSPD P DQRMSATGFEE +L+Y + + +
Sbjct: 193 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEEPDLTYQVSESD 250
>sp|Q54TY7|SRFA_DICDI Serum response factor homolog A OS=Dictyostelium discoideum GN=srfA
PE=1 SV=1
Length = 418
Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 116 DEGYSPSTQKGSPPSNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTG 175
D G S + + NGKK GR KIK+E+ID+K RR+ TFSKRK GIMKKAYELSTLTG
Sbjct: 48 DSGTSEPSSPSTGECNGKKA-GRRKIKIEFIDDKSRRHITFSKRKAGIMKKAYELSTLTG 106
Query: 176 TQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPD 218
TQV+LLVASETGHVYTFAT KLQP+IT GK LIQ+CLN+PD
Sbjct: 107 TQVLLLVASETGHVYTFATAKLQPLITRPEGKNLIQSCLNTPD 149
>sp|Q54RY6|SRFB_DICDI Serum response factor homolog B OS=Dictyostelium discoideum GN=srfB
PE=3 SV=1
Length = 467
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 76/94 (80%)
Query: 133 KKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTF 192
+K GR KI +E+I +K RR+ TFSKRK+GIMKKAYELSTLTGTQV+L+VASETGHVYTF
Sbjct: 33 EKKSGRRKINIEFIGDKSRRHITFSKRKSGIMKKAYELSTLTGTQVLLIVASETGHVYTF 92
Query: 193 ATRKLQPMITSEAGKALIQTCLNSPDPCPSGAGD 226
AT KLQP+IT + GK LIQ CLN+PD P D
Sbjct: 93 ATPKLQPLITKQEGKTLIQACLNTPDVPPVSKDD 126
>sp|P11746|MCM1_YEAST Pheromone receptor transcription factor OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MCM1 PE=1 SV=2
Length = 286
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Query: 124 QKGSPPSNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVA 183
++G+P +NG++ K R KI++++I+NK RR+ TFSKRK GIMKKA+ELS LTGTQV+LLV
Sbjct: 5 EEGTPTNNGQQ-KERRKIEIKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLVV 63
Query: 184 SETGHVYTFATRKLQPMITSEAGKALIQTCLNSP 217
SETG VYTF+T K +P++T + G+ LIQ CLN+P
Sbjct: 64 SETGLVYTFSTPKFEPIVTQQEGRNLIQACLNAP 97
>sp|Q5AFP3|MCM1_CANAL Transcription factor of morphogenesis MCM1 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=MCM1 PE=1 SV=1
Length = 262
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 73/99 (73%), Gaps = 3/99 (3%)
Query: 130 SNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHV 189
S GK K R KI++++I K RR+ TFSKRK GIMKKAYELS LTGTQV+LLV SETG V
Sbjct: 52 SQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYELSVLTGTQVLLLVVSETGLV 111
Query: 190 YTFATRKLQPMITSEAGKALIQTCLNSPDPCPSGAGDQR 228
YTF T KLQP++T GK LIQ CLN+P+ G GD +
Sbjct: 112 YTFTTPKLQPLVTKSEGKNLIQACLNAPE---EGLGDDQ 147
>sp|P07249|ARGR1_YEAST Arginine metabolism regulation protein I OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ARG80 PE=1
SV=2
Length = 177
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 64/89 (71%)
Query: 130 SNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHV 189
S+ T R K + YI+NK RR+ TFSKR+ GIMKKAYELS LTG ++LL+ + +G V
Sbjct: 72 SSDTSTVTRRKQPIRYIENKTRRHVTFSKRRHGIMKKAYELSVLTGANILLLILANSGLV 131
Query: 190 YTFATRKLQPMITSEAGKALIQTCLNSPD 218
YTF T KL+P++ + GK+LI+ C+N+ D
Sbjct: 132 YTFTTPKLEPVVREDEGKSLIRACINASD 160
>sp|P78926|MAP1_SCHPO Pheromone receptor transcription activator OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=map1 PE=4 SV=1
Length = 398
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 145 YIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSE 204
Y++++ +R TF+KRK GI KKA EL+ LTG++VM+LV SETG V+TF+T KL+ ++ S
Sbjct: 27 YLEDRQKRQNTFTKRKAGIFKKANELALLTGSEVMVLVVSETGLVHTFSTPKLENVVKSP 86
Query: 205 AGKALIQTCL--NSPDPCPSGAGDQRMSATGFEETELSYNIGDDEQKVRQ 252
G+ LI L + D S A + S+ ++E Y + +E ++ +
Sbjct: 87 EGQKLITESLINATTDQNESQASQAKQSSAQLSDSESGYPLDHEEMRISE 136
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6
PE=1 SV=2
Length = 252
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK 196
GR +++M+ I+NK+ R TFSKR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVG 61
Query: 197 LQPMI 201
++ I
Sbjct: 62 IESTI 66
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3
PE=2 SV=2
Length = 258
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTF 192
GR K++++ I+NK+ R TF+KR+ G++KKAYELS L ++ LL+ S G +Y F
Sbjct: 2 GRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEF 57
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TFSKR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 59
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR K++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G ++ F+T
Sbjct: 2 GRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 59
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR K++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G ++ F+T
Sbjct: 2 GRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 59
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TFSKR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 59
>sp|P40791|MEF2_DROME Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster
GN=Mef2 PE=1 SV=3
Length = 540
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK 196
GR KI++ I ++ R TF+KRK G+MKKAYELS L ++ L++ S + +Y +A+
Sbjct: 2 GRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTD 61
Query: 197 LQPMIT----------SEAGKALIQ----TCLNSPDPCPSGAGDQRMSATGFEETELSYN 242
+ ++ S K +I+ + SPD P D ++ TE YN
Sbjct: 62 MDRVLLKYTEYNEPHESLTNKNIIEKENKNGVMSPD-SPEAETDYTLTP----RTEAKYN 116
Query: 243 IGDDE----QKVRQLVYGGSPHLPSQPQSHPHQNYHPAGSPHQHHLYQSSPIIPCSSPGP 298
D+E + Q+ GG AG+P Q L SS +P S P P
Sbjct: 117 KIDEEFQNMMQRNQMAIGG------------------AGAPRQ--LPNSSYTLPVSVPVP 156
Query: 299 MIGSYPSPIPHSAYPHMSHSH 319
GSY + A P MSH++
Sbjct: 157 --GSYGDNLLQ-ASPQMSHTN 174
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TF+KR+ G++KKAYELS L +V L+V S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59
>sp|O04067|AGL9_SINAL Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9
PE=2 SV=1
Length = 254
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
>sp|P29384|SEP2_ARATH Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2
PE=1 SV=1
Length = 250
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TF+KR+ G++KKAYELS L +V L+V S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCS 59
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFA 193
GR K++++ I+NK+ R TFSKRK+G++KKAYELS L +V L++ S G +Y F+
Sbjct: 2 GRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFS 58
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
>sp|P29382|SEP1_ARATH Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1
PE=1 SV=2
Length = 251
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
>sp|O22456|SEP3_ARATH Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3
PE=1 SV=1
Length = 251
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
>sp|O65874|MTF1_PEA MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1
Length = 247
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ ++NK+ R TF+KR+ G++KKAYELS L +V L+V S G +Y F +
Sbjct: 2 GRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK 196
GR KI ++ IDN + R TFSKR+ G+MKKA EL+ L V L+V S TG +Y F++
Sbjct: 2 GRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSS 61
Query: 197 LQPMIT--SEAGK 207
++ +I EAG+
Sbjct: 62 MKSIIERYQEAGE 74
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR K+ ++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G +Y F++
Sbjct: 2 GRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSS 59
>sp|Q9SAR1|MADS8_ORYSJ MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica
GN=MADS8 PE=1 SV=1
Length = 248
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G +Y F +
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR K++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G ++ F++
Sbjct: 2 GRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSS 59
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR K++++ I+NK+ R TF+KR+ G++KKAYELS L +V L++ S G ++ F++
Sbjct: 2 GRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSS 59
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK 196
GR KI+++ IDN R TFSKR++G+ KKA ELS L +V LLV S T +Y FA+
Sbjct: 2 GRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSS 61
Query: 197 LQPMI 201
++ +I
Sbjct: 62 MKSII 66
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 43/58 (74%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TFSKR++G++KKA+E+S L +V L+V S G ++ +AT
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAT 59
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR K++++ I+NK+ R TFSKR++G++KKA E+S L +V L++ S G +Y +AT
Sbjct: 2 GRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYAT 59
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TFSKR+ G+MKKA+E+S L +V L+V S G ++ ++T
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYST 59
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TFSKR+ G+MKKA+E+S L +V L+V S G ++ ++T
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYST 59
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TFSKR+ G+MKKA+E+S L +V L+V S G ++ ++T
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYST 59
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK 196
GR KI + IDN R TFSKR+ G++KKA ELS L +V L+V S TG +Y F++
Sbjct: 2 GRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTN 61
Query: 197 LQPMI 201
++ +I
Sbjct: 62 MKTVI 66
>sp|Q38694|AGL9_ARADE Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2
SV=1
Length = 250
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 136 KGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
+GRV++KM I+NK+ R TF+KR+ ++KKAYELS L +V L++ S G +Y F +
Sbjct: 3 RGRVELKM--IENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 43/58 (74%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TFSKR++G++KKA+E+S L +V L+V S G ++ ++T
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYST 59
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 117 EGYSPSTQKGSPPSNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGT 176
E S T++ SP ++ GR KI+++ I+N R TF KR+ G++KKAYELS L
Sbjct: 2 EFQSDLTREISP----QRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDA 57
Query: 177 QVMLLVASETGHVYTFATRKLQPMI 201
+V L+V S G +Y +A ++ I
Sbjct: 58 EVALIVFSSRGRLYEYANNSVKATI 82
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK 196
GR KI+++ I+N R TF KR+ G++KKAYELS L +V L+V S G +Y +A
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 77
Query: 197 LQPMI 201
++ I
Sbjct: 78 VKATI 82
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR K++++ I+NK+ R TFSKR+ G++KKA+E+S L +V +V S G +Y +AT
Sbjct: 2 GRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYAT 59
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2
SV=1
Length = 248
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK 196
GR KI+++ I+N R TF KR+ G++KKAYELS L +V L+V S G +Y +A
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNS 77
Query: 197 LQPMI 201
++ I
Sbjct: 78 VKATI 82
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFA 193
GR KI+++ I+NK R TF KR+ G++KKAYEL+ L ++ L+V S G +Y F+
Sbjct: 2 GRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFS 58
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1
Length = 254
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 42/58 (72%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFAT 194
GR +++++ I+NK+ R TFSKR+ G++KKA+E+S L +V L+V S G ++ ++T
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYST 59
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK 196
GR KI+++ I+N R TF KR+ G++KKAYELS L +V L+V S G +Y +A
Sbjct: 2 GRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNN 61
Query: 197 LQPMI 201
++ I
Sbjct: 62 IRSTI 66
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 137 GRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRK 196
GR KI+++ I+N R TF KR+ G++KKAYELS L +V L+V S G +Y +A
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNS 77
Query: 197 LQPMITSEAGKALIQTCLNSPD 218
++ I + + C +SP+
Sbjct: 78 VKGTI-----ERYKKACTDSPN 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,289,979
Number of Sequences: 539616
Number of extensions: 5840794
Number of successful extensions: 52461
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 225
Number of HSP's that attempted gapping in prelim test: 42889
Number of HSP's gapped (non-prelim): 8281
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)