Query psy545
Match_columns 531
No_of_seqs 457 out of 2213
Neff 6.0
Searched_HMMs 46136
Date Fri Aug 16 17:50:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy545.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/545hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03230 lipo_lipase lipoprot 100.0 6E-105 1E-109 848.9 38.0 432 73-529 3-440 (442)
2 PF00151 Lipase: Lipase; Inte 100.0 1.2E-84 2.7E-89 674.8 14.4 321 41-376 1-331 (331)
3 cd00707 Pancreat_lipase_like P 100.0 1.5E-68 3.3E-73 541.7 22.8 274 75-372 1-275 (275)
4 cd01758 PLAT_LPL PLAT/ LH2 dom 99.8 1.3E-19 2.8E-24 166.1 14.2 127 379-523 1-137 (137)
5 cd01759 PLAT_PL PLAT/LH2 domai 99.8 1.7E-18 3.6E-23 153.7 11.8 99 379-502 1-99 (113)
6 cd01755 PLAT_lipase PLAT/ LH2 99.7 3.3E-17 7.1E-22 147.2 13.1 120 379-523 1-120 (120)
7 PRK00870 haloalkane dehalogena 99.4 1.2E-12 2.6E-17 133.0 11.3 105 108-221 44-151 (302)
8 PLN02824 hydrolase, alpha/beta 99.4 2.9E-12 6.3E-17 129.4 12.9 105 109-223 28-140 (294)
9 PRK10673 acyl-CoA esterase; Pr 99.4 4.1E-12 9E-17 124.3 12.1 100 109-219 15-115 (255)
10 PRK11126 2-succinyl-6-hydroxy- 99.4 4.3E-12 9.3E-17 123.4 11.1 99 109-219 1-101 (242)
11 TIGR02240 PHA_depoly_arom poly 99.3 5.1E-12 1.1E-16 126.6 10.2 103 108-220 23-126 (276)
12 PLN02385 hydrolase; alpha/beta 99.3 1.3E-11 2.9E-16 128.5 11.8 111 109-221 86-198 (349)
13 PLN02965 Probable pheophorbida 99.3 1.1E-11 2.3E-16 123.0 10.3 101 112-221 5-108 (255)
14 TIGR03056 bchO_mg_che_rel puta 99.3 2.3E-11 5E-16 119.7 12.4 102 109-220 27-130 (278)
15 PF12697 Abhydrolase_6: Alpha/ 99.3 1.7E-11 3.6E-16 114.4 10.9 99 113-221 1-102 (228)
16 PLN02298 hydrolase, alpha/beta 99.3 1.6E-11 3.5E-16 126.5 11.7 111 108-220 57-169 (330)
17 PRK03592 haloalkane dehalogena 99.3 2.9E-11 6.3E-16 122.1 11.8 101 109-219 26-127 (295)
18 TIGR03343 biphenyl_bphD 2-hydr 99.3 3.1E-11 6.8E-16 120.1 11.6 104 109-220 29-136 (282)
19 TIGR03611 RutD pyrimidine util 99.2 3.1E-11 6.7E-16 116.2 10.5 103 108-220 11-115 (257)
20 TIGR01250 pro_imino_pep_2 prol 99.2 6E-11 1.3E-15 115.7 12.3 103 110-220 25-131 (288)
21 PLN02679 hydrolase, alpha/beta 99.2 4E-11 8.6E-16 126.1 11.2 103 109-221 87-192 (360)
22 TIGR02427 protocat_pcaD 3-oxoa 99.2 3.1E-11 6.8E-16 114.7 9.4 103 109-221 12-115 (251)
23 PLN02211 methyl indole-3-aceta 99.2 4.9E-11 1.1E-15 120.7 10.7 104 108-219 16-121 (273)
24 PRK10349 carboxylesterase BioH 99.2 4.9E-11 1.1E-15 117.7 10.5 98 107-219 10-108 (256)
25 PRK10749 lysophospholipase L2; 99.2 8.4E-11 1.8E-15 121.9 12.7 107 109-220 53-166 (330)
26 PLN02578 hydrolase 99.2 6.3E-11 1.4E-15 124.1 11.1 104 109-222 85-189 (354)
27 PLN02511 hydrolase 99.2 1.1E-10 2.3E-15 124.4 12.1 109 107-218 97-208 (388)
28 PRK03204 haloalkane dehalogena 99.2 1.1E-10 2.4E-15 118.5 10.6 101 109-219 33-135 (286)
29 TIGR03695 menH_SHCHC 2-succiny 99.2 1.6E-10 3.5E-15 109.3 10.6 101 110-219 1-104 (251)
30 PLN03087 BODYGUARD 1 domain co 99.2 1.4E-10 3E-15 126.7 11.2 105 108-219 199-308 (481)
31 PRK06489 hypothetical protein; 99.1 1.3E-10 2.9E-15 121.8 10.1 104 110-219 69-188 (360)
32 TIGR03101 hydr2_PEP hydrolase, 99.1 4.1E-10 8.9E-15 114.4 11.9 108 110-221 25-135 (266)
33 PHA02857 monoglyceride lipase; 99.1 5.5E-10 1.2E-14 111.5 12.7 106 109-219 24-131 (276)
34 TIGR01738 bioH putative pimelo 99.1 2.5E-10 5.4E-15 108.4 9.2 97 109-220 3-100 (245)
35 PLN03084 alpha/beta hydrolase 99.1 4E-10 8.7E-15 120.1 11.3 103 109-221 126-233 (383)
36 PLN02894 hydrolase, alpha/beta 99.1 5.3E-10 1.1E-14 119.7 11.9 109 108-222 103-213 (402)
37 PRK14875 acetoin dehydrogenase 99.1 5.4E-10 1.2E-14 115.9 11.2 103 108-220 129-232 (371)
38 PRK10985 putative hydrolase; P 99.1 7.3E-10 1.6E-14 114.7 11.0 107 108-218 56-166 (324)
39 PRK10566 esterase; Provisional 99.0 1.2E-09 2.7E-14 107.3 11.3 104 108-214 25-135 (249)
40 KOG4409|consensus 99.0 6.4E-10 1.4E-14 115.2 9.2 108 108-222 88-197 (365)
41 PRK08775 homoserine O-acetyltr 99.0 4.5E-10 9.7E-15 117.0 7.9 101 110-220 57-173 (343)
42 PRK11071 esterase YqiA; Provis 99.0 9.4E-10 2E-14 106.0 9.1 90 111-220 2-93 (190)
43 TIGR01249 pro_imino_pep_1 prol 99.0 2.3E-09 5.1E-14 109.6 11.4 102 109-220 26-130 (306)
44 PLN02652 hydrolase; alpha/beta 99.0 2.3E-09 5E-14 114.7 11.5 108 108-220 134-245 (395)
45 PF12695 Abhydrolase_5: Alpha/ 98.9 5.4E-09 1.2E-13 93.4 10.3 93 112-218 1-93 (145)
46 TIGR01392 homoserO_Ac_trn homo 98.9 1.8E-09 3.9E-14 112.8 8.1 104 109-219 30-161 (351)
47 KOG4178|consensus 98.9 3.9E-09 8.4E-14 108.8 10.1 107 106-221 40-149 (322)
48 PLN00021 chlorophyllase 98.9 6.1E-09 1.3E-13 108.2 10.4 103 108-220 50-166 (313)
49 TIGR03100 hydr1_PEP hydrolase, 98.9 1.6E-08 3.5E-13 102.3 12.7 107 109-219 25-133 (274)
50 KOG2564|consensus 98.9 8.9E-09 1.9E-13 103.8 9.7 108 107-219 71-181 (343)
51 PRK07581 hypothetical protein; 98.9 4.5E-09 9.8E-14 108.8 7.8 107 110-220 41-159 (339)
52 KOG1454|consensus 98.9 8.6E-09 1.9E-13 107.7 9.6 102 108-217 56-160 (326)
53 PRK00175 metX homoserine O-ace 98.9 6.8E-09 1.5E-13 110.0 9.0 105 110-221 48-183 (379)
54 cd00741 Lipase Lipase. Lipase 98.8 2.9E-09 6.3E-14 98.4 5.3 111 166-279 10-126 (153)
55 COG2267 PldB Lysophospholipase 98.8 1.6E-08 3.5E-13 104.3 10.8 104 111-219 35-141 (298)
56 COG0429 Predicted hydrolase of 98.8 1.8E-08 3.9E-13 104.0 10.1 102 105-209 70-172 (345)
57 PRK05855 short chain dehydroge 98.8 1.4E-08 3E-13 111.4 9.9 90 108-206 23-114 (582)
58 PLN02980 2-oxoglutarate decarb 98.8 1.8E-08 3.9E-13 124.5 11.5 101 109-219 1370-1479(1655)
59 PRK13604 luxD acyl transferase 98.8 2.9E-08 6.4E-13 102.6 11.1 107 107-222 34-143 (307)
60 PRK05077 frsA fermentation/res 98.8 2.7E-08 5.9E-13 107.1 11.3 108 108-220 192-300 (414)
61 TIGR02821 fghA_ester_D S-formy 98.8 9.6E-08 2.1E-12 96.8 13.5 108 110-219 42-172 (275)
62 TIGR01840 esterase_phb esteras 98.8 2.5E-08 5.4E-13 97.0 8.8 109 108-218 11-128 (212)
63 PF01674 Lipase_2: Lipase (cla 98.7 3E-08 6.5E-13 98.1 8.2 100 111-216 2-105 (219)
64 COG0596 MhpC Predicted hydrola 98.7 9.2E-08 2E-12 89.1 10.6 102 110-221 21-124 (282)
65 COG1647 Esterase/lipase [Gener 98.7 8.5E-08 1.8E-12 94.1 10.1 111 104-221 9-119 (243)
66 KOG2382|consensus 98.7 8.9E-08 1.9E-12 98.8 10.3 125 108-246 50-176 (315)
67 KOG1455|consensus 98.7 1.3E-07 2.8E-12 96.6 11.1 115 109-225 53-169 (313)
68 TIGR01836 PHA_synth_III_C poly 98.6 9.7E-08 2.1E-12 99.9 9.8 105 110-220 62-171 (350)
69 cd01752 PLAT_polycystin PLAT/L 98.6 4.1E-07 8.9E-12 81.7 12.5 91 379-483 1-91 (120)
70 TIGR01607 PST-A Plasmodium sub 98.6 9.6E-08 2.1E-12 99.6 9.7 96 109-205 20-161 (332)
71 PLN02872 triacylglycerol lipas 98.6 3.6E-08 7.7E-13 105.6 6.4 110 108-222 72-199 (395)
72 PF05990 DUF900: Alpha/beta hy 98.6 1.5E-07 3.3E-12 93.9 10.0 110 108-221 16-138 (233)
73 PRK10162 acetyl esterase; Prov 98.6 2.2E-07 4.9E-12 96.3 9.9 101 110-219 81-194 (318)
74 PF07859 Abhydrolase_3: alpha/ 98.6 9.8E-08 2.1E-12 91.6 6.4 99 113-219 1-109 (211)
75 smart00308 LH2 Lipoxygenase ho 98.5 1E-06 2.3E-11 76.6 12.0 86 379-483 1-89 (105)
76 PRK11460 putative hydrolase; P 98.5 4.9E-07 1.1E-11 89.7 11.0 109 107-218 13-136 (232)
77 cd00113 PLAT PLAT (Polycystin- 98.5 1.5E-06 3.1E-11 77.0 12.3 90 379-483 1-90 (116)
78 PLN02442 S-formylglutathione h 98.5 5.1E-07 1.1E-11 92.2 10.2 109 108-219 45-177 (283)
79 PF00561 Abhydrolase_1: alpha/ 98.5 3.9E-07 8.4E-12 86.5 8.1 73 141-219 1-78 (230)
80 PF00975 Thioesterase: Thioest 98.4 1.3E-06 2.8E-11 84.8 11.0 103 111-223 1-107 (229)
81 TIGR03502 lipase_Pla1_cef extr 98.4 1.1E-06 2.3E-11 100.9 10.8 95 109-206 448-575 (792)
82 TIGR00976 /NonD putative hydro 98.4 1.1E-06 2.3E-11 97.9 9.2 113 109-224 21-136 (550)
83 KOG1838|consensus 98.3 2.2E-06 4.9E-11 91.2 10.3 105 107-218 122-234 (409)
84 PF02230 Abhydrolase_2: Phosph 98.3 3.2E-06 6.8E-11 82.5 10.4 114 107-223 11-143 (216)
85 TIGR01838 PHA_synth_I poly(R)- 98.3 2.1E-06 4.6E-11 95.2 9.4 105 109-219 187-301 (532)
86 PRK07868 acyl-CoA synthetase; 98.3 2.3E-06 5E-11 101.6 10.2 103 109-217 66-174 (994)
87 PF07819 PGAP1: PGAP1-like pro 98.3 4.7E-06 1E-10 82.8 10.5 126 109-244 3-142 (225)
88 PF12740 Chlorophyllase2: Chlo 98.2 4.2E-06 9.1E-11 84.7 9.4 103 108-220 15-131 (259)
89 PF01738 DLH: Dienelactone hyd 98.2 6.6E-06 1.4E-10 80.0 9.7 108 108-218 12-130 (218)
90 COG0657 Aes Esterase/lipase [L 98.2 5.5E-06 1.2E-10 85.2 9.2 109 106-219 75-190 (312)
91 COG0400 Predicted esterase [Ge 98.2 7E-06 1.5E-10 80.7 8.9 115 104-222 12-136 (207)
92 PF06821 Ser_hydrolase: Serine 98.2 9.3E-06 2E-10 77.4 9.2 90 113-221 1-92 (171)
93 PRK06765 homoserine O-acetyltr 98.1 1.2E-05 2.6E-10 86.2 10.0 104 110-219 56-195 (389)
94 cd01753 PLAT_LOX PLAT domain o 98.1 3.7E-05 8.1E-10 68.5 11.1 88 380-482 2-89 (113)
95 PF07224 Chlorophyllase: Chlor 98.1 9.3E-06 2E-10 81.8 7.7 105 106-220 42-157 (307)
96 cd01756 PLAT_repeat PLAT/LH2 d 98.0 5.3E-05 1.2E-09 68.0 11.5 89 380-483 2-91 (120)
97 PF01477 PLAT: PLAT/LH2 domain 98.0 5.5E-05 1.2E-09 66.0 11.1 95 381-496 1-95 (113)
98 PF00326 Peptidase_S9: Prolyl 98.0 9E-06 2E-10 78.6 6.6 86 134-219 8-98 (213)
99 KOG1552|consensus 98.0 3.2E-05 6.9E-10 77.8 10.5 104 109-219 59-162 (258)
100 PF06028 DUF915: Alpha/beta hy 98.0 3.8E-05 8.2E-10 77.9 10.1 110 107-222 8-143 (255)
101 PF06342 DUF1057: Alpha/beta h 98.0 5.4E-05 1.2E-09 77.2 11.1 103 109-220 34-137 (297)
102 COG4782 Uncharacterized protei 97.9 4.6E-05 9.9E-10 79.9 9.3 100 105-207 111-212 (377)
103 KOG4627|consensus 97.9 2.7E-05 5.8E-10 76.0 6.7 92 107-207 64-157 (270)
104 PF05728 UPF0227: Uncharacteri 97.8 6E-05 1.3E-09 73.0 8.5 90 113-222 2-93 (187)
105 KOG4391|consensus 97.8 4.2E-05 9.1E-10 75.2 6.4 94 109-207 77-170 (300)
106 PF10503 Esterase_phd: Esteras 97.7 8.2E-05 1.8E-09 73.9 7.9 100 109-209 15-120 (220)
107 PF10230 DUF2305: Uncharacteri 97.7 0.00018 3.9E-09 73.2 10.0 123 110-234 2-136 (266)
108 PF05057 DUF676: Putative seri 97.7 7.5E-05 1.6E-09 73.6 6.5 92 110-206 4-98 (217)
109 COG0412 Dienelactone hydrolase 97.6 0.00047 1E-08 69.0 11.8 107 110-219 27-145 (236)
110 KOG1515|consensus 97.6 0.0005 1.1E-08 72.4 12.4 109 108-220 88-207 (336)
111 KOG4667|consensus 97.6 0.00026 5.6E-09 69.7 9.2 102 107-215 30-134 (269)
112 PRK10252 entF enterobactin syn 97.6 0.00018 3.9E-09 87.1 10.1 102 109-221 1067-1172(1296)
113 cd02899 PLAT_SR Scavenger rece 97.6 0.00057 1.2E-08 60.7 10.2 81 380-481 2-82 (109)
114 PF03403 PAF-AH_p_II: Platelet 97.6 0.00023 5E-09 76.1 8.5 110 108-220 98-262 (379)
115 COG3319 Thioesterase domains o 97.5 0.00039 8.4E-09 70.6 8.6 100 111-221 1-104 (257)
116 PF12146 Hydrolase_4: Putative 97.3 0.00042 9.2E-09 57.8 5.6 63 109-174 15-78 (79)
117 COG3509 LpqC Poly(3-hydroxybut 97.3 0.00079 1.7E-08 69.1 8.4 104 108-217 59-179 (312)
118 PRK04940 hypothetical protein; 97.3 0.00087 1.9E-08 64.6 8.1 89 113-220 2-92 (180)
119 COG1075 LipA Predicted acetylt 97.3 0.00057 1.2E-08 71.9 7.4 102 110-222 59-166 (336)
120 cd01754 PLAT_plant_stress PLAT 97.3 0.0026 5.5E-08 58.2 10.4 90 379-482 1-97 (129)
121 PF06057 VirJ: Bacterial virul 97.2 0.0016 3.5E-08 63.3 9.0 84 129-220 19-107 (192)
122 COG2272 PnbA Carboxylesterase 97.2 0.0022 4.7E-08 70.0 10.9 112 106-221 89-218 (491)
123 COG1506 DAP2 Dipeptidyl aminop 97.2 0.0013 2.8E-08 74.6 9.3 104 104-209 386-496 (620)
124 PF00756 Esterase: Putative es 97.2 0.00052 1.1E-08 67.7 5.3 111 108-219 22-149 (251)
125 cd00312 Esterase_lipase Estera 97.2 0.0012 2.6E-08 72.1 8.6 104 107-216 92-209 (493)
126 COG3208 GrsT Predicted thioest 97.2 0.0011 2.4E-08 66.4 7.4 123 110-245 7-135 (244)
127 TIGR01839 PHA_synth_II poly(R) 97.1 0.0019 4.1E-08 72.0 9.3 103 109-217 214-325 (560)
128 PF06500 DUF1100: Alpha/beta h 97.0 0.001 2.2E-08 71.6 5.5 105 109-219 189-295 (411)
129 PF02129 Peptidase_S15: X-Pro 96.9 0.0027 5.8E-08 64.2 8.2 113 107-224 17-140 (272)
130 KOG2984|consensus 96.9 0.0032 7E-08 61.7 8.0 115 101-219 33-148 (277)
131 PF09752 DUF2048: Uncharacteri 96.9 0.011 2.4E-07 62.4 12.6 107 109-219 91-209 (348)
132 PRK10439 enterobactin/ferric e 96.9 0.007 1.5E-07 65.5 11.3 106 108-219 207-322 (411)
133 PF05448 AXE1: Acetyl xylan es 96.9 0.0042 9.2E-08 65.0 9.0 109 107-219 80-208 (320)
134 COG2021 MET2 Homoserine acetyl 96.8 0.0015 3.4E-08 68.9 5.6 125 110-248 51-204 (368)
135 PLN02733 phosphatidylcholine-s 96.8 0.0029 6.4E-08 69.0 8.0 90 128-226 110-204 (440)
136 COG3545 Predicted esterase of 96.8 0.0046 9.9E-08 59.3 7.8 91 111-220 3-94 (181)
137 PF05677 DUF818: Chlamydia CHL 96.8 0.0049 1.1E-07 64.7 8.7 91 109-206 136-235 (365)
138 COG4814 Uncharacterized protei 96.8 0.0059 1.3E-07 61.6 8.8 106 112-223 47-177 (288)
139 KOG2112|consensus 96.7 0.0079 1.7E-07 59.0 9.0 107 110-220 3-128 (206)
140 KOG2624|consensus 96.7 0.0021 4.5E-08 69.3 5.1 109 108-220 71-199 (403)
141 PRK10115 protease 2; Provision 96.6 0.0093 2E-07 68.6 9.7 100 107-208 442-546 (686)
142 PF00135 COesterase: Carboxyle 96.5 0.0048 1E-07 67.3 6.9 106 109-218 124-243 (535)
143 COG3571 Predicted hydrolase of 96.5 0.016 3.6E-07 55.0 9.1 104 106-217 10-121 (213)
144 PF06259 Abhydrolase_8: Alpha/ 96.5 0.019 4.1E-07 55.3 9.7 114 107-221 16-145 (177)
145 PTZ00472 serine carboxypeptida 96.4 0.013 2.7E-07 64.5 9.2 67 140-206 121-191 (462)
146 PF08538 DUF1749: Protein of u 96.4 0.019 4E-07 59.7 9.8 106 109-219 32-147 (303)
147 COG2945 Predicted hydrolase of 96.3 0.02 4.4E-07 55.7 9.0 108 107-220 25-138 (210)
148 COG4188 Predicted dienelactone 96.3 0.018 3.9E-07 61.0 9.2 97 108-208 69-182 (365)
149 PF12715 Abhydrolase_7: Abhydr 96.3 0.0088 1.9E-07 63.8 7.0 103 107-210 112-250 (390)
150 PF10340 DUF2424: Protein of u 96.3 0.02 4.3E-07 61.1 9.5 102 106-219 117-234 (374)
151 PF02450 LCAT: Lecithin:choles 96.1 0.02 4.4E-07 61.4 8.5 80 128-218 67-158 (389)
152 cd01757 PLAT_RAB6IP1 PLAT/LH2 96.0 0.079 1.7E-06 47.5 10.7 79 380-482 2-81 (114)
153 COG4099 Predicted peptidase [G 96.0 0.045 9.7E-07 56.6 10.1 94 110-209 191-292 (387)
154 smart00824 PKS_TE Thioesterase 96.0 0.041 9E-07 51.2 9.2 84 130-222 17-104 (212)
155 PF12048 DUF3530: Protein of u 95.9 0.091 2E-06 54.9 12.0 131 88-222 62-231 (310)
156 KOG3724|consensus 95.8 0.07 1.5E-06 61.2 11.5 129 107-242 86-237 (973)
157 PF02089 Palm_thioest: Palmito 95.8 0.021 4.7E-07 58.6 6.9 102 110-216 5-112 (279)
158 TIGR01849 PHB_depoly_PhaZ poly 95.8 0.038 8.3E-07 59.8 9.0 97 110-216 102-204 (406)
159 KOG3101|consensus 95.7 0.018 3.9E-07 56.9 5.6 110 109-219 43-175 (283)
160 PLN02606 palmitoyl-protein thi 95.6 0.055 1.2E-06 56.3 8.9 89 110-207 26-116 (306)
161 KOG2565|consensus 95.5 0.015 3.3E-07 61.6 4.5 91 109-208 151-251 (469)
162 KOG2541|consensus 95.4 0.23 5E-06 50.8 12.2 99 111-216 24-124 (296)
163 PF01083 Cutinase: Cutinase; 95.4 0.066 1.4E-06 51.4 8.2 90 112-206 7-101 (179)
164 PF01764 Lipase_3: Lipase (cla 95.3 0.025 5.4E-07 50.7 4.9 40 166-207 46-85 (140)
165 PF11187 DUF2974: Protein of u 95.3 0.025 5.4E-07 56.4 5.2 69 172-248 73-146 (224)
166 COG3150 Predicted esterase [Ge 95.3 0.06 1.3E-06 51.5 7.3 94 113-224 2-95 (191)
167 KOG3847|consensus 95.2 0.072 1.6E-06 55.5 8.2 43 107-152 115-157 (399)
168 COG4757 Predicted alpha/beta h 95.2 0.069 1.5E-06 53.6 7.8 92 113-208 32-127 (281)
169 COG3243 PhaC Poly(3-hydroxyalk 95.2 0.065 1.4E-06 57.8 8.1 102 109-216 106-213 (445)
170 COG3458 Acetyl esterase (deace 95.0 0.038 8.3E-07 56.5 5.5 105 108-216 81-206 (321)
171 PLN02633 palmitoyl protein thi 95.0 0.11 2.5E-06 54.1 9.0 98 112-216 27-127 (314)
172 PF03583 LIP: Secretory lipase 94.9 0.086 1.9E-06 54.4 8.1 87 129-221 16-111 (290)
173 PF08840 BAAT_C: BAAT / Acyl-C 94.9 0.042 9E-07 54.1 5.5 56 170-225 6-61 (213)
174 KOG1516|consensus 94.9 0.059 1.3E-06 59.9 7.3 92 110-204 112-213 (545)
175 KOG4372|consensus 94.7 0.026 5.5E-07 60.4 3.6 88 112-206 82-170 (405)
176 COG2382 Fes Enterochelin ester 94.6 0.05 1.1E-06 56.3 5.2 106 108-219 96-211 (299)
177 KOG2281|consensus 93.9 0.15 3.3E-06 57.4 7.3 155 105-270 637-801 (867)
178 cd00519 Lipase_3 Lipase (class 93.7 0.13 2.7E-06 50.6 5.9 39 168-208 112-150 (229)
179 COG0627 Predicted esterase [Ge 93.1 0.26 5.7E-06 51.7 7.4 65 140-207 98-173 (316)
180 KOG3975|consensus 92.7 0.63 1.4E-05 47.3 9.0 112 106-220 25-147 (301)
181 PLN02408 phospholipase A1 92.6 0.14 3E-06 54.7 4.5 44 165-208 179-222 (365)
182 PLN02454 triacylglycerol lipas 92.4 0.18 3.9E-06 54.6 5.2 43 165-207 207-249 (414)
183 PRK05371 x-prolyl-dipeptidyl a 92.2 0.54 1.2E-05 55.0 9.2 84 135-219 274-372 (767)
184 PF02273 Acyl_transf_2: Acyl t 92.0 1 2.2E-05 45.8 9.5 105 104-215 24-129 (294)
185 KOG3967|consensus 92.0 0.62 1.3E-05 46.4 7.8 102 108-219 99-226 (297)
186 KOG1553|consensus 91.9 0.36 7.7E-06 51.0 6.4 70 139-214 267-339 (517)
187 COG1770 PtrB Protease II [Amin 91.6 0.53 1.2E-05 53.4 7.8 137 106-248 444-600 (682)
188 KOG2100|consensus 91.0 0.56 1.2E-05 54.8 7.6 111 104-219 518-643 (755)
189 PLN02324 triacylglycerol lipas 91.0 0.29 6.3E-06 53.0 4.8 43 165-207 194-236 (415)
190 PF05277 DUF726: Protein of un 90.9 0.3 6.5E-06 51.9 4.8 59 156-218 194-258 (345)
191 PLN02802 triacylglycerol lipas 90.7 0.26 5.6E-06 54.5 4.1 44 165-208 309-352 (509)
192 PLN02571 triacylglycerol lipas 90.5 0.34 7.3E-06 52.6 4.8 40 168-207 208-247 (413)
193 PF03959 FSH1: Serine hydrolas 90.4 0.41 9E-06 46.8 5.0 92 109-205 3-121 (212)
194 PF05577 Peptidase_S28: Serine 89.6 1.6 3.5E-05 47.2 9.3 105 104-209 23-136 (434)
195 COG3946 VirJ Type IV secretory 89.4 0.9 1.9E-05 49.0 6.8 72 129-208 277-348 (456)
196 PLN02761 lipase class 3 family 88.9 0.48 1E-05 52.7 4.5 42 166-207 270-315 (527)
197 PLN02310 triacylglycerol lipas 88.8 0.46 9.9E-06 51.5 4.2 39 169-207 190-230 (405)
198 PLN02753 triacylglycerol lipas 88.4 0.59 1.3E-05 52.0 4.8 43 165-207 288-333 (531)
199 PLN02847 triacylglycerol lipas 87.8 0.64 1.4E-05 52.4 4.7 40 166-207 233-272 (633)
200 KOG4840|consensus 87.7 2.4 5.3E-05 42.6 8.1 90 107-202 33-123 (299)
201 PLN00413 triacylglycerol lipas 87.7 0.59 1.3E-05 51.4 4.2 23 184-206 282-304 (479)
202 PF11144 DUF2920: Protein of u 87.7 4 8.6E-05 44.3 10.4 42 110-151 35-76 (403)
203 KOG2931|consensus 87.7 2.9 6.4E-05 43.5 8.9 102 108-218 44-155 (326)
204 PF03096 Ndr: Ndr family; Int 87.5 2.2 4.8E-05 44.2 8.1 102 109-219 22-133 (283)
205 PF07082 DUF1350: Protein of u 86.6 4.4 9.5E-05 41.2 9.4 76 127-208 35-112 (250)
206 PLN02162 triacylglycerol lipas 86.4 0.71 1.5E-05 50.7 3.9 23 184-206 276-298 (475)
207 PLN02517 phosphatidylcholine-s 86.3 1.8 3.8E-05 49.1 7.0 70 129-205 159-232 (642)
208 PF08237 PE-PPE: PE-PPE domain 86.1 2 4.3E-05 43.0 6.7 61 140-207 2-69 (225)
209 PLN02719 triacylglycerol lipas 85.9 0.92 2E-05 50.4 4.5 42 166-207 275-319 (518)
210 COG2819 Predicted hydrolase of 85.7 0.96 2.1E-05 46.3 4.3 52 165-219 119-171 (264)
211 PLN03037 lipase class 3 family 85.1 0.93 2E-05 50.4 4.1 22 186-207 318-339 (525)
212 PF00450 Peptidase_S10: Serine 84.5 2 4.4E-05 45.4 6.4 66 140-205 85-155 (415)
213 KOG2183|consensus 84.2 4.1 8.8E-05 44.3 8.2 104 102-209 72-190 (492)
214 PLN02934 triacylglycerol lipas 83.9 1 2.2E-05 50.0 3.8 31 174-206 311-341 (515)
215 KOG3043|consensus 83.4 3.5 7.6E-05 41.4 6.9 88 111-202 40-136 (242)
216 KOG2237|consensus 83.4 1.6 3.4E-05 49.6 5.0 103 105-209 465-572 (712)
217 KOG2369|consensus 82.4 1.4 3.1E-05 48.2 4.1 38 168-207 166-203 (473)
218 KOG4389|consensus 81.3 2.8 6E-05 46.4 5.7 89 107-199 131-231 (601)
219 KOG2551|consensus 77.3 5.4 0.00012 40.0 5.9 33 169-205 91-123 (230)
220 KOG4388|consensus 76.8 5.1 0.00011 45.2 6.1 87 109-203 395-486 (880)
221 KOG3253|consensus 76.6 8 0.00017 43.9 7.6 92 108-205 174-269 (784)
222 COG2936 Predicted acyl esteras 74.0 10 0.00022 42.9 7.7 105 108-214 43-153 (563)
223 KOG2385|consensus 73.9 4.9 0.00011 44.7 5.1 112 155-279 420-540 (633)
224 PF04301 DUF452: Protein of un 73.7 12 0.00026 37.3 7.3 76 110-217 11-87 (213)
225 PF06309 Torsin: Torsin; Inte 73.4 3.5 7.7E-05 37.7 3.3 30 107-137 49-79 (127)
226 PF11288 DUF3089: Protein of u 72.6 4.2 9.1E-05 40.3 3.9 65 139-205 44-114 (207)
227 KOG4569|consensus 71.1 4 8.8E-05 43.1 3.6 38 169-208 156-193 (336)
228 TIGR03712 acc_sec_asp2 accesso 70.8 25 0.00055 39.1 9.6 130 105-248 281-419 (511)
229 COG5153 CVT17 Putative lipase 65.5 6.7 0.00015 40.8 3.7 26 183-208 273-298 (425)
230 KOG4540|consensus 65.5 6.7 0.00015 40.8 3.7 26 183-208 273-298 (425)
231 PF11339 DUF3141: Protein of u 63.6 65 0.0014 36.4 11.0 102 106-216 64-171 (581)
232 KOG2029|consensus 62.6 16 0.00036 41.4 6.3 61 139-200 477-540 (697)
233 PF04083 Abhydro_lipase: Parti 62.2 5.6 0.00012 31.9 2.0 23 105-128 38-60 (63)
234 PF05705 DUF829: Eukaryotic pr 54.7 37 0.00081 33.4 6.9 82 112-201 1-82 (240)
235 PLN03016 sinapoylglucose-malat 54.6 20 0.00043 39.4 5.3 66 140-206 115-185 (433)
236 PF06441 EHN: Epoxide hydrolas 52.4 8.4 0.00018 34.4 1.6 18 106-123 88-105 (112)
237 PLN02213 sinapoylglucose-malat 51.1 34 0.00074 35.7 6.2 64 141-205 2-70 (319)
238 COG0529 CysC Adenylylsulfate k 50.2 59 0.0013 31.9 7.0 68 104-173 16-90 (197)
239 KOG2182|consensus 49.9 1.2E+02 0.0027 34.0 10.2 113 107-224 83-209 (514)
240 PF01580 FtsK_SpoIIIE: FtsK/Sp 46.1 82 0.0018 30.1 7.6 67 113-179 40-117 (205)
241 KOG2170|consensus 45.8 21 0.00045 37.7 3.4 30 106-136 105-134 (344)
242 COG1505 Serine proteases of th 43.9 1.2E+02 0.0025 34.9 9.1 99 106-209 418-523 (648)
243 PF11906 DUF3426: Protein of u 43.7 2.5E+02 0.0054 25.5 10.1 73 378-451 67-148 (149)
244 PLN02209 serine carboxypeptida 41.8 46 0.00099 36.6 5.6 64 140-204 117-185 (437)
245 KOG1202|consensus 38.5 63 0.0014 40.0 6.2 98 106-220 2119-2219(2376)
246 PF09994 DUF2235: Uncharacteri 37.2 2E+02 0.0043 29.5 9.1 41 166-207 73-113 (277)
247 PF07519 Tannase: Tannase and 36.4 44 0.00095 37.2 4.4 40 181-220 110-150 (474)
248 PF02492 cobW: CobW/HypB/UreG, 36.2 32 0.0007 32.5 3.0 22 112-133 1-22 (178)
249 PF14253 AbiH: Bacteriophage a 34.6 33 0.00073 34.2 3.0 15 184-198 233-247 (270)
250 KOG1282|consensus 34.4 58 0.0013 36.1 5.0 65 140-204 117-186 (454)
251 COG3727 Vsr DNA G:T-mismatch r 34.1 57 0.0012 30.3 4.0 38 109-146 56-114 (150)
252 PF05576 Peptidase_S37: PS-10 34.1 1.1E+02 0.0023 33.8 6.7 103 104-214 57-163 (448)
253 PF01935 DUF87: Domain of unkn 31.4 52 0.0011 32.0 3.7 38 113-150 25-62 (229)
254 COG2939 Carboxypeptidase C (ca 31.3 50 0.0011 36.9 3.8 77 140-216 146-232 (498)
255 COG2805 PilT Tfp pilus assembl 31.0 1.2E+02 0.0027 32.1 6.3 83 109-193 123-206 (353)
256 COG3673 Uncharacterized conser 29.7 4.4E+02 0.0096 28.3 10.1 31 172-203 109-139 (423)
257 PF06792 UPF0261: Uncharacteri 29.5 2.9E+02 0.0063 30.3 9.1 97 114-214 4-124 (403)
258 PF03283 PAE: Pectinacetyleste 28.1 80 0.0017 33.9 4.6 55 170-225 140-199 (361)
259 KOG1551|consensus 27.7 60 0.0013 33.8 3.3 35 184-218 193-228 (371)
260 smart00827 PKS_AT Acyl transfe 26.0 84 0.0018 31.8 4.2 26 179-206 77-102 (298)
261 COG3640 CooC CO dehydrogenase 23.8 94 0.002 31.8 3.9 38 113-150 2-39 (255)
262 smart00037 CNX Connexin homolo 22.5 49 0.0011 23.5 1.1 8 272-279 14-21 (34)
263 PLN02752 [acyl-carrier protein 22.2 1.6E+02 0.0035 30.8 5.6 18 189-206 127-144 (343)
264 PF01583 APS_kinase: Adenylyls 21.1 1.2E+02 0.0026 28.7 3.8 38 110-148 1-38 (156)
265 PRK00889 adenylylsulfate kinas 20.2 1.5E+02 0.0032 27.6 4.3 38 110-148 3-40 (175)
266 PF00326 Peptidase_S9: Prolyl 20.2 2.9E+02 0.0064 26.1 6.5 42 109-151 143-185 (213)
No 1
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=100.00 E-value=6.4e-105 Score=848.90 Aligned_cols=432 Identities=32% Similarity=0.575 Sum_probs=377.9
Q ss_pred cccccEEEEeecCCCCC-CceeecCCcccccccCCCCCCceEEEEccCCCCCC-chhHHHHHHHHhcCC-CeEEEEEeCC
Q psy545 73 AVIDTRFILYTRKNPTE-GHMLKVQNERTIEKSNFDPKKKTKFIIHGFIDTPL-SSWVKEMRRELLKHS-DWNVIVVDWA 149 (531)
Q Consensus 73 ~~i~~~f~LyTr~n~~~-~~~l~~~~~~~i~~s~fn~~~ptvviIHGw~~s~~-~~w~~~l~~aLL~~~-d~NVI~VDw~ 149 (531)
++|+|+|+||||+||+. .|.|.+.++++|..++||+++||+|+||||.+++. ..|+..|+++|+.++ ++|||+|||+
T Consensus 3 ~~i~~~F~L~Tr~n~~~~~~~l~~~~~~si~~s~Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~ 82 (442)
T TIGR03230 3 TDIESKFSLRTPEEPDDDTCYIVPGQPDSIADCNFNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWL 82 (442)
T ss_pred cccccEEEEEecCCCCCCceEEecCChhhhhhcCcCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECC
Confidence 57999999999999998 46899999999999999999999999999998763 579998998887543 7999999999
Q ss_pred CCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCCCccCCCCC
Q psy545 150 GGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEPYFQGMPP 228 (531)
Q Consensus 150 g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP~F~~~~~ 228 (531)
+++.+.|++++.+++.||++++++|++|.+..+++++++||||||||||||+++|++.++ |+||||||||+|+|+..++
T Consensus 83 g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F~~~~~ 162 (442)
T TIGR03230 83 SRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTFEYADA 162 (442)
T ss_pred CcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCccccccc
Confidence 999999999899999999999999999987778889999999999999999999998887 9999999999999999999
Q ss_pred CCCCCccchhhhHHhhhcCCcccccccccccccccccccCCCCCCCCCCCCCCCCCcchhhhhhhhhcccccccCChhhh
Q psy545 229 FARLDPTDADLVDVIHTDGSSIFLLGYGMSETCGHLDFYPNNGKEQPGCDLTETPLPLTLIKEGIEEAGRVLVACNHVRA 308 (531)
Q Consensus 229 ~~rLd~sDA~fVDvIHTd~~~~~~~g~G~~~p~GHvDFYPNGG~~QPGC~~~~~~~~~~~~~~g~~~~~~~~~~CsH~Ra 308 (531)
..|||++||+||||||||+..++.+++|+.+|+||+|||||||..||||+..... ..+...++ ++..++++|||.||
T Consensus 163 ~~rLd~~DA~fVdVIHTd~~~~~~~~lG~~~piGh~DFYPNGG~~QPGC~~~~~~--~~~~~~~~-~~~~~~~~CsH~Ra 239 (442)
T TIGR03230 163 PSTLSPDDADFVDVLHTNTRGSPDRSIGIQRPVGHIDIYPNGGTFQPGCDIQETL--LVIAEKGL-GNMDQLVKCSHERS 239 (442)
T ss_pred ccccCCCCCCeEEEEEecCCccccccccccccccceEeccCCCCCCCCCCccccc--cccccccc-cccCcCccchhHHH
Confidence 9999999999999999999876677899999999999999999999999754211 00111232 33456789999999
Q ss_pred HHHHHhccC-CCCCceeecCCChhhhccCcccccCCCCCccccccccccCCCCCCCcEEEEecCCCCCcccceeEEEEEE
Q psy545 309 IKLFTESIN-SKCPYVAHRCPSYQHFLQGRCFSCGENGTGCALMGLEAQKTNHPPGSKYYITTGKEVPFCRHHYRITLDL 387 (531)
Q Consensus 309 ~~~f~eSi~-~~~~f~a~~C~s~~~f~~g~C~~c~~~~~~c~~mGy~a~~~~~~~~~~~yl~T~~~~Pf~~~~y~v~i~~ 387 (531)
++||+|||. ++|+|+|++|+||++|+.|.|++|+.+ +|+.|||++++.+...+++|||+|++.+|||++||+|+|++
T Consensus 240 ~~~f~eSi~~~~~~f~a~~C~s~~~f~~g~C~~c~~~--~c~~mG~~~~~~~~~~~g~~yl~T~~~~Pf~~~~y~v~v~~ 317 (442)
T TIGR03230 240 IHLFIDSLLNEENPSMAYRCSSKEAFNKGLCLSCRKN--RCNKLGYEINKVRTKRSSKMYLKTREMMPYKVFHYQVKVHF 317 (442)
T ss_pred HHHHHHHhcccCCCeeeEECCCHHHHhcCCCCCCCCC--CCceeCccccccccCCceEEEEEeCCCCCceEEEEEEEEEE
Confidence 999999995 459999999999999999999999876 79999999998754446799999999999999999999999
Q ss_pred cCCCCCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCccCCceecccc
Q psy545 388 ARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVLQPRSLCFLW 467 (531)
Q Consensus 388 ~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~~p~~w~~~w 467 (531)
+++.. ...++|+|+|+|+|++|++++++|+ .+ .++||+|||+||+++.|||++++|+|+|+++ ++++ |.+||
T Consensus 318 ~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~-~~--~~~~~~t~~~~i~~~~~~g~~~~v~~~w~~~--~~~~--~~~~~ 389 (442)
T TIGR03230 318 FGKTS-LSHTDQPMKISLYGTHGEKENIPFT-LP--EVSTNKTYSFLITTDVDIGELLMVKLKWEKD--TYIS--WSDWW 389 (442)
T ss_pred ecccc-ccccCCcEEEEEEcCCCCccceEEe-ee--eecCCCeEEEEEecccCCCceEEEEEEEeCC--Cccc--chhhh
Confidence 98642 2247899999999999999999998 32 5999999999999999999999999999865 4444 44489
Q ss_pred cCCcEEEEEEEEeeccccccccccceeeccccCCCCCccchhhccCcc-EEEecCcchhhhhc
Q psy545 468 CNDHLYVSSIKVTETKDIMARDKRAIETNSKLCSPGYREYADVASRSS-AVFLDNSCEEDLLT 529 (531)
Q Consensus 468 ~~~~~~i~~i~v~~~e~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~-~~f~~~~~~~~~~~ 529 (531)
..|+++|++|+||++|+ |++ .++|+. +.+++.+.++++ +|||+ |++++.+
T Consensus 390 ~~~~~~~~~i~v~~ge~-----~~~----~~fc~~-~~~~~~~~~~~~~~~~~~--~~~~~~~ 440 (442)
T TIGR03230 390 SSPGFHIRKLRIKSGET-----QSK----VIFSAK-EGEFSYLQRGGEAAVFVK--CKEKSLS 440 (442)
T ss_pred cCCceeEEEEEEEeCCC-----ccE----EEECCC-CCCcceeccCCcceeEEe--ecccccc
Confidence 99999999999999974 444 457886 667787777777 99999 9999874
No 2
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=100.00 E-value=1.2e-84 Score=674.76 Aligned_cols=321 Identities=46% Similarity=0.895 Sum_probs=254.4
Q ss_pred cceecCCCCccccCCcccc-cccCCcccCCCCCcccccEEEEeecCCCCCCceeecCCcccccccCCCCCCceEEEEccC
Q psy545 41 ETRCYDELGCLNVTRDWYH-LIYRPFNIFPLPRAVIDTRFILYTRKNPTEGHMLKVQNERTIEKSNFDPKKKTKFIIHGF 119 (531)
Q Consensus 41 ~~vCY~~~gCf~~~~~~~~-~~~rp~~~~P~~~~~i~~~f~LyTr~n~~~~~~l~~~~~~~i~~s~fn~~~ptvviIHGw 119 (531)
++|||+.+|||++..||.. ...+|+..+|.+|++++|+|+||||.|++..+.+...+.+++.++.||+++||+|+||||
T Consensus 1 ~~~cy~~~gCf~~~~~~~~~~~~~~~~~~p~~~~~~~v~f~LyT~~n~~~~~~l~~~~~~~l~~s~fn~~~pt~iiiHGw 80 (331)
T PF00151_consen 1 KQVCYGDVGCFGQDPPWSSNNLRRPVKSLPQSPNEIDVKFYLYTRSNPDNPQLLDNGDPESLRNSNFNPSKPTVIIIHGW 80 (331)
T ss_dssp -EEEETTTEEEESSTTTSS-STTS-S------HHHHT-EEEEEETTEECCEEEEBTSSTHHHHTSS--TTSEEEEEE--T
T ss_pred CCCCccccCCCCCCCCCCCccccChhhhCCCCCCCCCeEEEEECCCCCCceeEeccCCcccccccccCCCCCeEEEEcCc
Confidence 3799999999999999998 567899989999999999999999999999999988888899999999999999999999
Q ss_pred CCCC-CchhHHHHHHHHhcC--CCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechh
Q psy545 120 IDTP-LSSWVKEMRRELLKH--SDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLG 196 (531)
Q Consensus 120 ~~s~-~~~w~~~l~~aLL~~--~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLG 196 (531)
.++. ...|+..|+++|+.+ +++|||+|||..++...|.+++.|++.||+.||++|..|.+..|+++++|||||||||
T Consensus 81 ~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLG 160 (331)
T PF00151_consen 81 TGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLG 160 (331)
T ss_dssp T-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCH
T ss_pred CCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccc
Confidence 9999 789999999999998 8999999999998888999999999999999999999998788999999999999999
Q ss_pred hhhhhhhhhccCC---cceeeecCCCCCccCCCCCCCCCCccchhhhHHhhhcCCcccccccccccccccccccCCCCCC
Q psy545 197 AHTAGYAGQAIEG---LGRITGLDPAEPYFQGMPPFARLDPTDADLVDVIHTDGSSIFLLGYGMSETCGHLDFYPNNGKE 273 (531)
Q Consensus 197 AhVAg~ag~~~~~---V~RItgLDPAgP~F~~~~~~~rLd~sDA~fVDvIHTd~~~~~~~g~G~~~p~GHvDFYPNGG~~ 273 (531)
|||||+||+++.+ |+||||||||+|+|+..++..|||++||+||||||||++.++.+++|+.+|+||+|||||||..
T Consensus 161 AHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~~rL~~~DA~fVdvIHT~~~~~~~~~~G~~~~~Gh~DFYpNgG~~ 240 (331)
T PF00151_consen 161 AHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPSERLDKSDAKFVDVIHTNAGTLPGGGLGTSEPIGHVDFYPNGGRR 240 (331)
T ss_dssp HHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TTTS--GGGSSEEEEE-SSES-HHH-SSBESS--SSEEEEETTTTS
T ss_pred hhhhhhhhhhccCcceeeEEEecCcccccccCCChhHhhhccCCceEEEEEcCCccccCCccccccccccceeecCCCcc
Confidence 9999999999876 9999999999999999888999999999999999999977777789999999999999999999
Q ss_pred CCCCCCCCCCCcchhhhhhhhhcccccccCChhhhHHHHHhccCCCCCceeecCCChhhhccCcccccCCCCCccccccc
Q psy545 274 QPGCDLTETPLPLTLIKEGIEEAGRVLVACNHVRAIKLFTESINSKCPYVAHRCPSYQHFLQGRCFSCGENGTGCALMGL 353 (531)
Q Consensus 274 QPGC~~~~~~~~~~~~~~g~~~~~~~~~~CsH~Ra~~~f~eSi~~~~~f~a~~C~s~~~f~~g~C~~c~~~~~~c~~mGy 353 (531)
||||+.... +.. ..+.|||.||++||+|||.++|+|+|++|.||++|++|+|..|..+ .|+.|||
T Consensus 241 QPGC~~~~~------------~~~-~~~~CsH~ra~~~f~eSi~~~~~f~a~~C~s~~~~~~g~C~~c~~~--~~~~mG~ 305 (331)
T PF00151_consen 241 QPGCGNDSL------------ELT-RFISCSHMRAVEYFAESINNPCNFPAVRCSSYDSFLAGKCDGCNNN--RCAVMGY 305 (331)
T ss_dssp -TTSSS-CH------------TTC-SHHHHHHHHHHHHHHHHHHSTTTTB-EE-S-HHHHHTTTS-S--TT-----BSSG
T ss_pred CCCCccccc------------cce-ecchhhhHHHHHHHHHHhcCCCCceeEeCcCHHHHhhcccccCCCC--CCcCCCC
Confidence 999976421 001 2468999999999999999999999999999999999999999876 8999999
Q ss_pred cccCCC---CCCCcEEEEecCCCCCc
Q psy545 354 EAQKTN---HPPGSKYYITTGKEVPF 376 (531)
Q Consensus 354 ~a~~~~---~~~~~~~yl~T~~~~Pf 376 (531)
++++.+ ....|.|||.|++++||
T Consensus 306 ~~~~~~~~~~~~~G~yyl~T~~~~Pf 331 (331)
T PF00151_consen 306 HADKFKGKTSPARGIYYLETNAKSPF 331 (331)
T ss_dssp GGGGSTTTTSSSSEEEEE---SSST-
T ss_pred CcccCCccccCCCeEEEEeeCCCCcC
Confidence 977654 22467999999999998
No 3
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=100.00 E-value=1.5e-68 Score=541.74 Aligned_cols=274 Identities=51% Similarity=0.972 Sum_probs=248.8
Q ss_pred cccEEEEeecCCCCCCceeecCCcccccccCCCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCC
Q psy545 75 IDTRFILYTRKNPTEGHMLKVQNERTIEKSNFDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLP 154 (531)
Q Consensus 75 i~~~f~LyTr~n~~~~~~l~~~~~~~i~~s~fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~ 154 (531)
++|+|+||||+|++.++.+...+..++..+.|++++|++|+||||.++....|...++++|+.+.++|||+|||++++..
T Consensus 1 ~~~~f~l~t~~~~~~~~~~~~~~~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~ 80 (275)
T cd00707 1 IDVRFLLYTRENPNCPQLLFADDPSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANP 80 (275)
T ss_pred CCCEEEEecCCCCCCceEecCCChhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccccc
Confidence 47899999999999999998887888999999999999999999999886689988988898877899999999998778
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCCCccCCCCCCCCCC
Q psy545 155 LYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEPYFQGMPPFARLD 233 (531)
Q Consensus 155 ~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP~F~~~~~~~rLd 233 (531)
.|+.+..+++.++++++.+|+.|.+..+++.+++||||||||||||+++|+++++ |+||++||||+|+|...++..|||
T Consensus 81 ~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f~~~~~~~rl~ 160 (275)
T cd00707 81 NYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLFSGADPEDRLD 160 (275)
T ss_pred ChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcccccCCCcccccC
Confidence 8999999999999999999999987778888999999999999999999999886 999999999999999988889999
Q ss_pred ccchhhhHHhhhcCCcccccccccccccccccccCCCCCCCCCCCCCCCCCcchhhhhhhhhcccccccCChhhhHHHHH
Q psy545 234 PTDADLVDVIHTDGSSIFLLGYGMSETCGHLDFYPNNGKEQPGCDLTETPLPLTLIKEGIEEAGRVLVACNHVRAIKLFT 313 (531)
Q Consensus 234 ~sDA~fVDvIHTd~~~~~~~g~G~~~p~GHvDFYPNGG~~QPGC~~~~~~~~~~~~~~g~~~~~~~~~~CsH~Ra~~~f~ 313 (531)
++||+||||||||++. +|+..|+||+|||||||..||||+..... ..+..|||.||++||+
T Consensus 161 ~~dA~~V~vihT~~~~-----~G~~~~~gh~dfypngg~~QpgC~~~~~~--------------~~~~~CsH~ra~~~~~ 221 (275)
T cd00707 161 PSDAQFVDVIHTDGGL-----LGFSQPIGHADFYPNGGRDQPGCPKDILS--------------SDFVACSHQRAVHYFA 221 (275)
T ss_pred CCCCCeEEEEEeCCCC-----CCccccccceEeccCCCCCCCCCCCcccc--------------ccccccchHHHHHHHH
Confidence 9999999999999985 89999999999999999999999754100 1256899999999999
Q ss_pred hccCCCCCceeecCCChhhhccCcccccCCCCCccccccccccCCCCCCCcEEEEecCC
Q psy545 314 ESINSKCPYVAHRCPSYQHFLQGRCFSCGENGTGCALMGLEAQKTNHPPGSKYYITTGK 372 (531)
Q Consensus 314 eSi~~~~~f~a~~C~s~~~f~~g~C~~c~~~~~~c~~mGy~a~~~~~~~~~~~yl~T~~ 372 (531)
|||.++|+|+|++|++|++|+.+.|..|.. .|..|||++++.. ..|+|||.|++
T Consensus 222 esi~~~~~f~a~~C~~~~~~~~~~C~~~~~---~~~~mG~~~~~~~--~~G~~~~~T~~ 275 (275)
T cd00707 222 ESILSPCGFVAYPCSSYDEFLAGKCFPCGS---GCVRMGYHADRFR--REGKFYLKTNA 275 (275)
T ss_pred HHccCCCCceeEeCCCHHHHhcCCCCCCCC---CCcccCCccCCCC--CCceEEEEcCC
Confidence 999999999999999999999999998854 4899999998754 23689999974
No 4
>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL). LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=99.82 E-value=1.3e-19 Score=166.13 Aligned_cols=127 Identities=20% Similarity=0.375 Sum_probs=100.1
Q ss_pred ceeEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCcc
Q psy545 379 HHYRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVL 458 (531)
Q Consensus 379 ~~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~ 458 (531)
+||||+|++++...+. .+.|.+.|+|+|++|+++.++|+..+ ++++|++|+|||+++.|+|+|++|+|+|+.+. .
T Consensus 1 yhYqVtV~~~~~~~~~-~t~~~v~i~L~G~~g~S~~~~l~~~~--~~~~G~t~sfLi~t~~dlG~L~~vk~~W~~n~--~ 75 (137)
T cd01758 1 FHYQLKIHFFNQTNRI-ETDPTFTISLYGTLGESENLPLTLPE--GITGNKTNSFLITTEKDIGDLLMLKLKWEGSS--L 75 (137)
T ss_pred CeEEEEEEEecccCCC-cccceEEEEEEcCCCcccCEEEecCc--ccCCCCeEEEEEECCCCcCCEEEEEEEEeCCC--C
Confidence 6999999999864321 26789999999999999999998432 46899999999999999999999999998663 2
Q ss_pred CCce---------ecccccCCcEEEEEEEEeeccccccccccceeeccccCCCCCccchhhccCcc-EEEecCcc
Q psy545 459 QPRS---------LCFLWCNDHLYVSSIKVTETKDIMARDKRAIETNSKLCSPGYREYADVASRSS-AVFLDNSC 523 (531)
Q Consensus 459 ~p~~---------w~~~w~~~~~~i~~i~v~~~e~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~-~~f~~~~~ 523 (531)
++.+ |..+|..|+|+|++|+||++|+ |+++. +|+. + ..+.+.++++ +|||+ |
T Consensus 76 ~~~sW~~~~~~~~~~~~~~~p~l~~~~I~Vk~GEt-----q~~~~----FC~~-~-~~~~~~~~~~~~~fv~--c 137 (137)
T cd01758 76 WSNSWWTVQTIIPWSGWWRGSGLTIRKIRVKAGET-----QKKMT----FCAE-D-PESSLLRPGQEKVFVK--C 137 (137)
T ss_pred CChhhhccccccccccccCCCeEEEEEEEEEeCCC-----ccEEE----ECCC-C-cccccccCccceEEec--C
Confidence 3333 3345678999999999999974 55444 6775 4 4455556655 99999 8
No 5
>cd01759 PLAT_PL PLAT/LH2 domain of pancreatic triglyceride lipase. Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of triglyceride lipases is in energy production. The proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=99.78 E-value=1.7e-18 Score=153.71 Aligned_cols=99 Identities=27% Similarity=0.478 Sum_probs=85.0
Q ss_pred ceeEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCcc
Q psy545 379 HHYRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVL 458 (531)
Q Consensus 379 ~~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~ 458 (531)
+||||+|+++++. .+.|+|.|+|+|++|++++++|+ .+ .++||+||++||+.+.|+|+|.+|+|.|+++ +|
T Consensus 1 ~~Yqv~V~~s~~~----~~~g~~~vsL~G~~g~s~~~~i~-~g--~l~pg~tys~li~~d~dvG~l~~Vkf~W~~~--~~ 71 (113)
T cd01759 1 WRYKVSVTLSGKK----KVTGTILVSLYGNKGNTRQYEIF-KG--TLKPGNTYSAFIDVDVDVGPLTKVKFIWNNN--VI 71 (113)
T ss_pred CeEEEEEEEeccc----ccCceEEEEEEcCCCCccceEEE-ee--eecCCCEEEEEEEccCCCCCEEEEEEEEeCC--cc
Confidence 6999999999864 27899999999999999999998 43 4999999999999999999999999999864 66
Q ss_pred CCceecccccCCcEEEEEEEEeeccccccccccceeeccccCCC
Q psy545 459 QPRSLCFLWCNDHLYVSSIKVTETKDIMARDKRAIETNSKLCSP 502 (531)
Q Consensus 459 ~p~~w~~~w~~~~~~i~~i~v~~~e~~~~~~~~~~~~~~~~C~~ 502 (531)
+| ..|+++|++|+||++|+ +.+ .++|+.
T Consensus 72 n~-------~~p~~~~~~I~Vq~Ge~-----~~~----~~FC~~ 99 (113)
T cd01759 72 NI-------TLPKVGAEKITVQSGKD-----GKV----FNFCSS 99 (113)
T ss_pred CC-------CCCeEEEEEEEEEeCCC-----ccE----EEECCC
Confidence 65 34799999999999974 444 457874
No 6
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=99.73 E-value=3.3e-17 Score=147.21 Aligned_cols=120 Identities=22% Similarity=0.364 Sum_probs=95.4
Q ss_pred ceeEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCcc
Q psy545 379 HHYRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVL 458 (531)
Q Consensus 379 ~~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~ 458 (531)
+||+|+|++.+...+ .+.|.+.|+|+|++|+++.++|+.. .+++|++|+|||+++.|+|+|++|+|.|+++....
T Consensus 1 ~hY~vtV~~~~~~~a--gt~~~v~v~L~G~~g~s~~~~l~~~---~~~~g~~~sfli~t~~~lG~l~~v~~~~dn~~~~~ 75 (120)
T cd01755 1 WHYQVKVHLSGKKNL--EVDGTFTVSLYGTKGETEQLPIVLG---ELKPNKTYSFLIDTEVDIGDLLKVKFKWENNVINS 75 (120)
T ss_pred CEEEEEEEEeCcccc--CcCccEEEEEEcCCCCcccEEEeCC---cccCCCEEEEEEEcCCCccceEEEEEEEcCCCccc
Confidence 699999999986533 4678999999999999999999832 36999999999999999999999999998763222
Q ss_pred CCceecccccCCcEEEEEEEEeeccccccccccceeeccccCCCCCccchhhccCccEEEecCcc
Q psy545 459 QPRSLCFLWCNDHLYVSSIKVTETKDIMARDKRAIETNSKLCSPGYREYADVASRSSAVFLDNSC 523 (531)
Q Consensus 459 ~p~~w~~~w~~~~~~i~~i~v~~~e~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~f~~~~~ 523 (531)
++ +|..|+++|++|+|+++|+ ++ +..+|+. +.+ ... +-+.+||+ |
T Consensus 76 ~~-----~~~~p~~~~~~I~Vq~get-----~~----~~~FC~~-~~~-~~~--~~~~~~~~--C 120 (120)
T cd01755 76 NS-----GETLPKLGARKIRVKSGET-----QK----KFTFCSQ-DTV-REL--EVLQTLVK--C 120 (120)
T ss_pred cc-----ccCCCcEEEEEEEEEECCC-----CC----EEEEECC-CCc-ccc--ceEEEEcC--C
Confidence 22 6889999999999999974 44 4457885 322 111 44489988 8
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.40 E-value=1.2e-12 Score=133.00 Aligned_cols=105 Identities=13% Similarity=0.074 Sum_probs=77.9
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh--hcccHHHHHHHHHHHHHHHHHhcCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ--ATANTRLVGLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~--a~~n~r~Vg~~la~~I~~L~~~~g~~~ 185 (531)
+++|++|+||||.++. ..|. .+.+.| .+.+|+||++|++|+|.+.-+. ...+....+++++++++.| ..
T Consensus 44 ~~~~~lvliHG~~~~~-~~w~-~~~~~L-~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l------~~ 114 (302)
T PRK00870 44 ADGPPVLLLHGEPSWS-YLYR-KMIPIL-AAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL------DL 114 (302)
T ss_pred CCCCEEEEECCCCCch-hhHH-HHHHHH-HhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc------CC
Confidence 3578999999998776 4675 455555 3348999999999998764321 2245566677777776654 45
Q ss_pred CcEEEEEechhhhhhhhhhhccCC-cceeeecCCCCC
Q psy545 186 ADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP 221 (531)
++++||||||||.+|..++...+. |.+++.++|+.|
T Consensus 115 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 151 (302)
T PRK00870 115 TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLP 151 (302)
T ss_pred CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCC
Confidence 789999999999999976665554 999999998644
No 8
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.39 E-value=2.9e-12 Score=129.37 Aligned_cols=105 Identities=15% Similarity=0.110 Sum_probs=81.0
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh-------hcccHHHHHHHHHHHHHHHHHhc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ-------ATANTRLVGLELAYFVNYLKDNY 181 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~-------a~~n~r~Vg~~la~~I~~L~~~~ 181 (531)
..|++|++|||.++.. .|.. +.+.|. .+++||++|++|+|.+..+. ...++...++++..+|+.+
T Consensus 28 ~~~~vlllHG~~~~~~-~w~~-~~~~L~--~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l---- 99 (294)
T PLN02824 28 SGPALVLVHGFGGNAD-HWRK-NTPVLA--KSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV---- 99 (294)
T ss_pred CCCeEEEECCCCCChh-HHHH-HHHHHH--hCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh----
Confidence 4589999999998874 6764 455554 35899999999999765432 2467788888888888765
Q ss_pred CCCCCcEEEEEechhhhhhhhhhhccC-CcceeeecCCCCCcc
Q psy545 182 GLNPADVHMIGHSLGAHTAGYAGQAIE-GLGRITGLDPAEPYF 223 (531)
Q Consensus 182 g~~~~~vhLIGHSLGAhVAg~ag~~~~-~V~RItgLDPAgP~F 223 (531)
..+++||+||||||.||..++...+ .|.+|+.++|+.+.+
T Consensus 100 --~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~ 140 (294)
T PLN02824 100 --VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGL 140 (294)
T ss_pred --cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccc
Confidence 3589999999999999986655545 599999999875443
No 9
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.37 E-value=4.1e-12 Score=124.31 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=75.6
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
++|++|++||+.++.. .|. .+...| . .+++||++|++|+|.+.... .......++++..+|+.+ ..+++
T Consensus 15 ~~~~iv~lhG~~~~~~-~~~-~~~~~l-~-~~~~vi~~D~~G~G~s~~~~-~~~~~~~~~d~~~~l~~l------~~~~~ 83 (255)
T PRK10673 15 NNSPIVLVHGLFGSLD-NLG-VLARDL-V-NDHDIIQVDMRNHGLSPRDP-VMNYPAMAQDLLDTLDAL------QIEKA 83 (255)
T ss_pred CCCCEEEECCCCCchh-HHH-HHHHHH-h-hCCeEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHc------CCCce
Confidence 5788999999988873 564 455555 3 37999999999998765432 245566677777776654 45789
Q ss_pred EEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 189 HMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
+|+||||||.+|..++...+. |.+++.+|++
T Consensus 84 ~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~ 115 (255)
T PRK10673 84 TFIGHSMGGKAVMALTALAPDRIDKLVAIDIA 115 (255)
T ss_pred EEEEECHHHHHHHHHHHhCHhhcceEEEEecC
Confidence 999999999999976665554 9999999864
No 10
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.35 E-value=4.3e-12 Score=123.44 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=74.5
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
++|++|+||||.++. ..|.. +.+.| + +|+||++||+|+|.+..+. ..+....++++.++|+.+ ..+++
T Consensus 1 ~~p~vvllHG~~~~~-~~w~~-~~~~l-~--~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~~------~~~~~ 68 (242)
T PRK11126 1 GLPWLVFLHGLLGSG-QDWQP-VGEAL-P--DYPRLYIDLPGHGGSAAIS-VDGFADVSRLLSQTLQSY------NILPY 68 (242)
T ss_pred CCCEEEEECCCCCCh-HHHHH-HHHHc-C--CCCEEEecCCCCCCCCCcc-ccCHHHHHHHHHHHHHHc------CCCCe
Confidence 358899999999887 47854 45544 3 6999999999998764332 236666677776666543 46899
Q ss_pred EEEEechhhhhhhhhhhcc-CC-cceeeecCCC
Q psy545 189 HMIGHSLGAHTAGYAGQAI-EG-LGRITGLDPA 219 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~-~~-V~RItgLDPA 219 (531)
+||||||||.+|..++... +. |.+|+.++|.
T Consensus 69 ~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 69 WLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred EEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 9999999999999765544 55 9999988765
No 11
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.33 E-value=5.1e-12 Score=126.62 Aligned_cols=103 Identities=17% Similarity=0.104 Sum_probs=78.9
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
++.+++|+||||.++.. .|.. +.+.| . .+++||++|++|+|.+.-+....+....++++.++|+.+ ..++
T Consensus 23 ~~~~plvllHG~~~~~~-~w~~-~~~~L-~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l------~~~~ 92 (276)
T TIGR02240 23 EGLTPLLIFNGIGANLE-LVFP-FIEAL-D-PDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYL------DYGQ 92 (276)
T ss_pred CCCCcEEEEeCCCcchH-HHHH-HHHHh-c-cCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh------CcCc
Confidence 35578999999998874 6753 44544 4 379999999999997653333445667777877777765 4678
Q ss_pred EEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
++|+||||||.||..++...+. |.+|+.++|+.
T Consensus 93 ~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 93 VNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred eEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 9999999999999976666554 99999999875
No 12
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.30 E-value=1.3e-11 Score=128.52 Aligned_cols=111 Identities=16% Similarity=0.154 Sum_probs=81.2
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhh-cccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQA-TANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a-~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
.++++|++|||.++.. .|...+...|.+ .||+|+++|++|+|.+..... ..+....++++..+++.+......+..+
T Consensus 86 ~~~~iv~lHG~~~~~~-~~~~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~ 163 (349)
T PLN02385 86 PKAAVCFCHGYGDTCT-FFFEGIARKIAS-SGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLP 163 (349)
T ss_pred CCeEEEEECCCCCccc-hHHHHHHHHHHh-CCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCC
Confidence 5689999999988763 444556665643 589999999999987643221 2355666778888887775332334568
Q ss_pred EEEEEechhhhhhhhhhhccCC-cceeeecCCCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP 221 (531)
++|+||||||.||..++...+. |.+++.++|+..
T Consensus 164 ~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 164 SFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred EEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 9999999999999976665555 999999998754
No 13
>PLN02965 Probable pheophorbidase
Probab=99.29 E-value=1.1e-11 Score=123.02 Aligned_cols=101 Identities=18% Similarity=0.250 Sum_probs=75.3
Q ss_pred eEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh-hcccHHHHHHHHHHHHHHHHHhcCCCC-CcEE
Q psy545 112 TKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ-ATANTRLVGLELAYFVNYLKDNYGLNP-ADVH 189 (531)
Q Consensus 112 tvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~-a~~n~r~Vg~~la~~I~~L~~~~g~~~-~~vh 189 (531)
++|+||||..+. ..|. .+.+.|.+ .+|+||++|++|+|.+.... ...+....++++..+|+.| .. ++++
T Consensus 5 ~vvllHG~~~~~-~~w~-~~~~~L~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~~ 75 (255)
T PLN02965 5 HFVFVHGASHGA-WCWY-KLATLLDA-AGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL------PPDHKVI 75 (255)
T ss_pred EEEEECCCCCCc-CcHH-HHHHHHhh-CCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc------CCCCCEE
Confidence 389999999776 3675 45555533 48999999999998764322 2345666777777777654 23 5999
Q ss_pred EEEechhhhhhhhhhhccCC-cceeeecCCCCC
Q psy545 190 MIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 190 LIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP 221 (531)
||||||||.||..++...+. |.+++.++++.+
T Consensus 76 lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 108 (255)
T PLN02965 76 LVGHSIGGGSVTEALCKFTDKISMAIYVAAAMV 108 (255)
T ss_pred EEecCcchHHHHHHHHhCchheeEEEEEccccC
Confidence 99999999999977666555 999999998754
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.29 E-value=2.3e-11 Score=119.71 Aligned_cols=102 Identities=18% Similarity=0.179 Sum_probs=75.0
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhh-cccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQA-TANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a-~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
..|++|++|||.++. ..|. .+.+.| . .+++|+++|++|+|.+.-+.. ..+....++++.++++.+ ..++
T Consensus 27 ~~~~vv~~hG~~~~~-~~~~-~~~~~l-~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~------~~~~ 96 (278)
T TIGR03056 27 AGPLLLLLHGTGAST-HSWR-DLMPPL-A-RSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE------GLSP 96 (278)
T ss_pred CCCeEEEEcCCCCCH-HHHH-HHHHHH-h-hCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc------CCCC
Confidence 468999999998876 3564 445555 3 369999999999986532222 345666677776666543 3578
Q ss_pred EEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
++|+||||||.+|..++...+. +.+|+.++++.
T Consensus 97 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 97 DGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred ceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 9999999999999977766665 89999998754
No 15
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.29 E-value=1.7e-11 Score=114.36 Aligned_cols=99 Identities=22% Similarity=0.324 Sum_probs=75.1
Q ss_pred EEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh--hcccHHHHHHHHHHHHHHHHHhcCCCCCcEEE
Q psy545 113 KFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ--ATANTRLVGLELAYFVNYLKDNYGLNPADVHM 190 (531)
Q Consensus 113 vviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~--a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhL 190 (531)
||+|||+.++. ..|. .+.+.| + .+++|+++|++|++.+.... ........++++.++|+.+ ..++++|
T Consensus 1 vv~~hG~~~~~-~~~~-~~~~~l-~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~l 70 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWD-PLAEAL-A-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL------GIKKVIL 70 (228)
T ss_dssp EEEE-STTTTG-GGGH-HHHHHH-H-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT------TTSSEEE
T ss_pred eEEECCCCCCH-HHHH-HHHHHH-h-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc------ccccccc
Confidence 68999999887 4565 466655 5 59999999999998764433 2445666677777776654 3489999
Q ss_pred EEechhhhhhhhhhhccC-CcceeeecCCCCC
Q psy545 191 IGHSLGAHTAGYAGQAIE-GLGRITGLDPAEP 221 (531)
Q Consensus 191 IGHSLGAhVAg~ag~~~~-~V~RItgLDPAgP 221 (531)
+|||+||.+|..++...+ .|.+++.++|...
T Consensus 71 vG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 71 VGHSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp EEETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred cccccccccccccccccccccccceeeccccc
Confidence 999999999997766655 4999999998864
No 16
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.29 E-value=1.6e-11 Score=126.46 Aligned_cols=111 Identities=17% Similarity=0.186 Sum_probs=80.1
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhh-cccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQA-TANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a-~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
+.+++||++|||+.+....| ..+...|. ..||+|+++|++|+|.+.-... .......++++..+|+.|.........
T Consensus 57 ~~~~~VvllHG~~~~~~~~~-~~~~~~L~-~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~ 134 (330)
T PLN02298 57 PPRALIFMVHGYGNDISWTF-QSTAIFLA-QMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGL 134 (330)
T ss_pred CCceEEEEEcCCCCCcceeh-hHHHHHHH-hCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCC
Confidence 35678999999986542122 33444443 4589999999999987642221 345677788999999988653333345
Q ss_pred cEEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
+++|+||||||.+|..++...+. |.+++.+.|..
T Consensus 135 ~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 135 PRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred CEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 79999999999999876665554 99999998864
No 17
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.26 E-value=2.9e-11 Score=122.14 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=78.6
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
++|++|+|||+.++. ..|. .+.+.|.+ .+.||++|++|+|.+..+....+....++++..+++.| ..+++
T Consensus 26 ~g~~vvllHG~~~~~-~~w~-~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~ 95 (295)
T PRK03592 26 EGDPIVFLHGNPTSS-YLWR-NIIPHLAG--LGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL------GLDDV 95 (295)
T ss_pred CCCEEEEECCCCCCH-HHHH-HHHHHHhh--CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCe
Confidence 457899999998776 4675 45666643 46999999999998755444456777788888877765 35899
Q ss_pred EEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 189 HMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
|||||||||.||..++...+. |.+|+.++|.
T Consensus 96 ~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 96 VLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred EEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 999999999999976665555 9999999983
No 18
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.26 E-value=3.1e-11 Score=120.07 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=71.8
Q ss_pred CCceEEEEccCCCCCCchhHH--HHHHHHhcCCCeEEEEEeCCCCCCCchhhhc-ccHHHHHHHHHHHHHHHHHhcCCCC
Q psy545 109 KKKTKFIIHGFIDTPLSSWVK--EMRRELLKHSDWNVIVVDWAGGSLPLYTQAT-ANTRLVGLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~--~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~-~n~r~Vg~~la~~I~~L~~~~g~~~ 185 (531)
+.|++|+||||..+.. .|.. .....+++ .+|+||++|++|+|.+...... ......++++.++++.+ +.
T Consensus 29 ~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------~~ 100 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAG-GWSNYYRNIGPFVD-AGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL------DI 100 (282)
T ss_pred CCCeEEEECCCCCchh-hHHHHHHHHHHHHh-CCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc------CC
Confidence 4578999999987663 4532 22334544 4799999999999876533211 11112345555555543 57
Q ss_pred CcEEEEEechhhhhhhhhhhccC-CcceeeecCCCC
Q psy545 186 ADVHMIGHSLGAHTAGYAGQAIE-GLGRITGLDPAE 220 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~ag~~~~-~V~RItgLDPAg 220 (531)
++++|+||||||.+|..++.+.+ .|.+++.++|++
T Consensus 101 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 101 EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 89999999999999987655555 499999999864
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.25 E-value=3.1e-11 Score=116.24 Aligned_cols=103 Identities=15% Similarity=0.171 Sum_probs=75.9
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchh-hhcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYT-QATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~-~a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
.++|++|++|||+++. ..|.. ..+.| . .+++||++|++|+|.+.-. ....+....++++.++++.+ ...
T Consensus 11 ~~~~~iv~lhG~~~~~-~~~~~-~~~~l-~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~------~~~ 80 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSG-SYWAP-QLDVL-T-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL------NIE 80 (257)
T ss_pred CCCCEEEEEcCCCcch-hHHHH-HHHHH-H-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh------CCC
Confidence 3578999999999887 36654 44444 4 3799999999999865321 22345666677777777654 457
Q ss_pred cEEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
+++|+||||||++|..++...+. |.+++.+++..
T Consensus 81 ~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~ 115 (257)
T TIGR03611 81 RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWS 115 (257)
T ss_pred cEEEEEechhHHHHHHHHHHChHHhHHheeecCCC
Confidence 89999999999999976655554 99999988753
No 20
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.24 E-value=6e-11 Score=115.70 Aligned_cols=103 Identities=20% Similarity=0.172 Sum_probs=74.4
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhh---cccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQA---TANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a---~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
++++|++||+.++.. .|...+. .++...+++||++|++|++.+..+.. ..++..+++++..+++.+ ..+
T Consensus 25 ~~~vl~~hG~~g~~~-~~~~~~~-~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 96 (288)
T TIGR01250 25 KIKLLLLHGGPGMSH-EYLENLR-ELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL------GLD 96 (288)
T ss_pred CCeEEEEcCCCCccH-HHHHHHH-HHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc------CCC
Confidence 678999999977663 4544444 45554589999999999987543221 245666666666655543 356
Q ss_pred cEEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
+++||||||||.+|..++...+. |.+++.++|+.
T Consensus 97 ~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 97 KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred cEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 79999999999999976665554 99999888754
No 21
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.23 E-value=4e-11 Score=126.07 Aligned_cols=103 Identities=16% Similarity=0.197 Sum_probs=77.0
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh-hcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ-ATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~-a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
..|++|+||||.++. ..|... .+.| . .+|+||++|++|+|.+..+. ...+....++++..+++.| ..++
T Consensus 87 ~gp~lvllHG~~~~~-~~w~~~-~~~L-~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l------~~~~ 156 (360)
T PLN02679 87 SGPPVLLVHGFGASI-PHWRRN-IGVL-A-KNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV------VQKP 156 (360)
T ss_pred CCCeEEEECCCCCCH-HHHHHH-HHHH-h-cCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh------cCCC
Confidence 358899999999887 467654 4444 4 37999999999998764332 2345666777777777654 4579
Q ss_pred EEEEEechhhhhhhhhhh-ccCC-cceeeecCCCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQ-AIEG-LGRITGLDPAEP 221 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~-~~~~-V~RItgLDPAgP 221 (531)
++||||||||.+|..++. ..+. |.+++.++|++.
T Consensus 157 ~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 157 TVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred eEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccc
Confidence 999999999999986554 4444 999999999754
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.23 E-value=3.1e-11 Score=114.75 Aligned_cols=103 Identities=15% Similarity=0.117 Sum_probs=76.2
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
++|++|++||+..+. ..|. .+.+. |. .+++|+++|++|+|.+.......+....++++..+++.+ +.+++
T Consensus 12 ~~~~li~~hg~~~~~-~~~~-~~~~~-l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~------~~~~v 81 (251)
T TIGR02427 12 GAPVLVFINSLGTDL-RMWD-PVLPA-LT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL------GIERA 81 (251)
T ss_pred CCCeEEEEcCcccch-hhHH-HHHHH-hh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCce
Confidence 578999999998776 3564 45544 44 479999999999987543333445666677777766654 45789
Q ss_pred EEEEechhhhhhhhhhhccCC-cceeeecCCCCC
Q psy545 189 HMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP 221 (531)
+|+||||||.+|..++...+. |.+++.++|+..
T Consensus 82 ~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 115 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAK 115 (251)
T ss_pred EEEEeCchHHHHHHHHHHCHHHhHHHhhccCccc
Confidence 999999999999876655544 999999987643
No 23
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.22 E-value=4.9e-11 Score=120.74 Aligned_cols=104 Identities=16% Similarity=0.233 Sum_probs=74.8
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh-hcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ-ATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~-a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
.++|++|||||+..+. ..|. .+... |+..+|+|+++|+++++.+.... ...+....++.+.++|+.+ + ..+
T Consensus 16 ~~~p~vvliHG~~~~~-~~w~-~~~~~-L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l----~-~~~ 87 (273)
T PLN02211 16 RQPPHFVLIHGISGGS-WCWY-KIRCL-MENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL----P-ENE 87 (273)
T ss_pred CCCCeEEEECCCCCCc-CcHH-HHHHH-HHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc----C-CCC
Confidence 4678999999998876 3674 45554 44458999999999998642211 1245565666666666543 1 247
Q ss_pred cEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
+++||||||||.++..++...+. |.+++.+++.
T Consensus 88 ~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 88 KVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 99999999999999977766654 9999999764
No 24
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.22 E-value=4.9e-11 Score=117.70 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=69.1
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
..+.|++|+||||.++. ..|.. +.++| . .+|+||++|++|+|.+.-.. ..+.... ++.+.+ . ..+
T Consensus 10 G~g~~~ivllHG~~~~~-~~w~~-~~~~L-~-~~~~vi~~Dl~G~G~S~~~~-~~~~~~~-------~~~l~~-~--~~~ 74 (256)
T PRK10349 10 GQGNVHLVLLHGWGLNA-EVWRC-IDEEL-S-SHFTLHLVDLPGFGRSRGFG-ALSLADM-------AEAVLQ-Q--APD 74 (256)
T ss_pred CCCCCeEEEECCCCCCh-hHHHH-HHHHH-h-cCCEEEEecCCCCCCCCCCC-CCCHHHH-------HHHHHh-c--CCC
Confidence 33445799999998887 47764 55555 3 36999999999998753221 2333322 222322 2 358
Q ss_pred cEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
++|||||||||.+|..++...+. |.+|+.++|+
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCc
Confidence 99999999999999976665555 9999999985
No 25
>PRK10749 lysophospholipase L2; Provisional
Probab=99.22 E-value=8.4e-11 Score=121.87 Aligned_cols=107 Identities=16% Similarity=0.107 Sum_probs=77.8
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh------hcccHHHHHHHHHHHHHHHHHhcC
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ------ATANTRLVGLELAYFVNYLKDNYG 182 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~------a~~n~r~Vg~~la~~I~~L~~~~g 182 (531)
.+++|||+||+.++.. .| ..++..|++ .||+|+++|++|+|.+.... .........+++..+++.+...
T Consensus 53 ~~~~vll~HG~~~~~~-~y-~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-- 127 (330)
T PRK10749 53 HDRVVVICPGRIESYV-KY-AELAYDLFH-LGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP-- 127 (330)
T ss_pred CCcEEEEECCccchHH-HH-HHHHHHHHH-CCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc--
Confidence 4678999999987652 34 345555654 58999999999998753211 1135667777888888876432
Q ss_pred CCCCcEEEEEechhhhhhhhhhhccC-CcceeeecCCCC
Q psy545 183 LNPADVHMIGHSLGAHTAGYAGQAIE-GLGRITGLDPAE 220 (531)
Q Consensus 183 ~~~~~vhLIGHSLGAhVAg~ag~~~~-~V~RItgLDPAg 220 (531)
.+..+++|+||||||.+|..++...+ .|.+++.+.|+.
T Consensus 128 ~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 128 GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 25689999999999999985444444 499999998863
No 26
>PLN02578 hydrolase
Probab=99.21 E-value=6.3e-11 Score=124.07 Aligned_cols=104 Identities=20% Similarity=0.234 Sum_probs=79.6
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
++|++|+||||.++. ..|.. +.+.|. .+|+|+++|++|+|.+..+....+....++++..+++.+ ..+++
T Consensus 85 ~g~~vvliHG~~~~~-~~w~~-~~~~l~--~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~------~~~~~ 154 (354)
T PLN02578 85 EGLPIVLIHGFGASA-FHWRY-NIPELA--KKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV------VKEPA 154 (354)
T ss_pred CCCeEEEECCCCCCH-HHHHH-HHHHHh--cCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh------ccCCe
Confidence 357799999999875 46754 445553 369999999999987654444455666677888887765 24789
Q ss_pred EEEEechhhhhhhhhhhccCC-cceeeecCCCCCc
Q psy545 189 HMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEPY 222 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP~ 222 (531)
+||||||||.||..++...+. |.+++.++|+++.
T Consensus 155 ~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~ 189 (354)
T PLN02578 155 VLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQF 189 (354)
T ss_pred EEEEECHHHHHHHHHHHhChHhcceEEEECCCccc
Confidence 999999999999987666665 9999999998653
No 27
>PLN02511 hydrolase
Probab=99.19 E-value=1.1e-10 Score=124.41 Aligned_cols=109 Identities=21% Similarity=0.260 Sum_probs=77.9
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
+.++|++|++|||.++....|+..++..+++ .||+||++|++|+|.+.-...........+++..+|++|...+ +..
T Consensus 97 ~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~-~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~ 173 (388)
T PLN02511 97 PADAPVLILLPGLTGGSDDSYVRHMLLRARS-KGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRY--PSA 173 (388)
T ss_pred CCCCCEEEEECCCCCCCCCHHHHHHHHHHHH-CCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHC--CCC
Confidence 4568899999999887766687767666665 5899999999999864321111111233468888888886543 456
Q ss_pred cEEEEEechhhhhhh-hhhhccCC--cceeeecCC
Q psy545 187 DVHMIGHSLGAHTAG-YAGQAIEG--LGRITGLDP 218 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg-~ag~~~~~--V~RItgLDP 218 (531)
++++|||||||.++. +++++... |.+++.+.+
T Consensus 174 ~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~ 208 (388)
T PLN02511 174 NLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCN 208 (388)
T ss_pred CEEEEEechhHHHHHHHHHhcCCCCCceEEEEECC
Confidence 899999999999987 56776554 666666643
No 28
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.17 E-value=1.1e-10 Score=118.48 Aligned_cols=101 Identities=11% Similarity=0.067 Sum_probs=72.0
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhh-cccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQA-TANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a-~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
++|++|+||||..+. ..|. .+.+.| . .+|+||++|++|+|.+..+.. .......++++..+++.+ +.++
T Consensus 33 ~~~~iv~lHG~~~~~-~~~~-~~~~~l-~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 102 (286)
T PRK03204 33 TGPPILLCHGNPTWS-FLYR-DIIVAL-R-DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL------GLDR 102 (286)
T ss_pred CCCEEEEECCCCccH-HHHH-HHHHHH-h-CCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCC
Confidence 358899999998654 3564 455555 3 369999999999987643321 234555666666666543 4578
Q ss_pred EEEEEechhhhhhhhhhhccC-CcceeeecCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIE-GLGRITGLDPA 219 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~-~V~RItgLDPA 219 (531)
++++||||||.||..++...+ .|.+|+.++|.
T Consensus 103 ~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 103 YLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred EEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 999999999999986555444 49999988764
No 29
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.16 E-value=1.6e-10 Score=109.31 Aligned_cols=101 Identities=15% Similarity=0.251 Sum_probs=69.7
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh--hcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ--ATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~--a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
+|++|++||+.++.. .|. .+.+.| . .+++|+++|++|+|.+.-+. ........+++ ++..+.+.. +.++
T Consensus 1 ~~~vv~~hG~~~~~~-~~~-~~~~~L-~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~ 71 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQ-ALIELL-G-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQD---ILATLLDQL--GIEP 71 (251)
T ss_pred CCEEEEEcCCCCchh-hHH-HHHHHh-c-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHH---HHHHHHHHc--CCCe
Confidence 478999999988774 564 455555 3 58999999999988653211 12233333333 233333332 4689
Q ss_pred EEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
++|+||||||++|..++...+. |.+++.++|.
T Consensus 72 ~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 72 FFLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred EEEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 9999999999999977666665 8999988875
No 30
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.16 E-value=1.4e-10 Score=126.74 Aligned_cols=105 Identities=22% Similarity=0.299 Sum_probs=73.4
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHh--cCCCeEEEEEeCCCCCCCchhh-hcccHHHHHHHHH-HHHHHHHHhcCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELL--KHSDWNVIVVDWAGGSLPLYTQ-ATANTRLVGLELA-YFVNYLKDNYGL 183 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL--~~~d~NVI~VDw~g~~~~~Y~~-a~~n~r~Vg~~la-~~I~~L~~~~g~ 183 (531)
+.+|++||||||.++. ..|...+...|. .+.+|+||++|++|+|.+.-+. ........++++. .+++. .
T Consensus 199 ~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~----l-- 271 (481)
T PLN03087 199 KAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLER----Y-- 271 (481)
T ss_pred CCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHH----c--
Confidence 3467999999999887 467654444442 1358999999999998754321 2234555555553 34433 3
Q ss_pred CCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
..++++|+||||||.+|..++...+. |.+++.++|+
T Consensus 272 g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 272 KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 46899999999999999976555554 9999999874
No 31
>PRK06489 hypothetical protein; Provisional
Probab=99.14 E-value=1.3e-10 Score=121.75 Aligned_cols=104 Identities=13% Similarity=0.191 Sum_probs=69.9
Q ss_pred CceEEEEccCCCCCCchhH-HHHHHHHh------cCCCeEEEEEeCCCCCCCchhhh-------cccHHHHHHHHHHHHH
Q psy545 110 KKTKFIIHGFIDTPLSSWV-KEMRRELL------KHSDWNVIVVDWAGGSLPLYTQA-------TANTRLVGLELAYFVN 175 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~-~~l~~aLL------~~~d~NVI~VDw~g~~~~~Y~~a-------~~n~r~Vg~~la~~I~ 175 (531)
.|++|+||||.++.. .|. ..+.+.|. ...+|+||++|++|+|.+.-+.. ..++...++++..+
T Consensus 69 gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~-- 145 (360)
T PRK06489 69 DNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRL-- 145 (360)
T ss_pred CCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHH--
Confidence 688999999998864 453 34444331 13579999999999986532211 23444444444333
Q ss_pred HHHHhcCCCCCcEE-EEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 176 YLKDNYGLNPADVH-MIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 176 ~L~~~~g~~~~~vh-LIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
+.+.. ..++++ |+||||||.||..++.+.+. |.+++.++++
T Consensus 146 -l~~~l--gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 146 -VTEGL--GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred -HHHhc--CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 22222 467886 89999999999976655554 9999998875
No 32
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.12 E-value=4.1e-10 Score=114.43 Aligned_cols=108 Identities=18% Similarity=0.143 Sum_probs=77.5
Q ss_pred CceEEEEccCCCCCC--chhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 110 KKTKFIIHGFIDTPL--SSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 110 ~ptvviIHGw~~s~~--~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
+|++|++|||.+... ......+.+.|. ..||+|+++|++|+|.+.-.....+.....+++..++++|.+ . ...+
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La-~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~-~--~~~~ 100 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFA-AGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIE-Q--GHPP 100 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHh-c--CCCC
Confidence 688999999986532 111234455554 468999999999998753222223455566788888888854 3 3679
Q ss_pred EEEEEechhhhhhhhhhhccC-CcceeeecCCCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIE-GLGRITGLDPAEP 221 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~-~V~RItgLDPAgP 221 (531)
++|+||||||.+|..++...+ .+.+++.++|+..
T Consensus 101 v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 999999999999997665554 4999999998754
No 33
>PHA02857 monoglyceride lipase; Provisional
Probab=99.12 E-value=5.5e-10 Score=111.46 Aligned_cols=106 Identities=18% Similarity=0.181 Sum_probs=73.0
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCc-hhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPL-YTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~-Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
.++++|++|||.++. ..|. .+++.|. ..+++|+++|++|+|.+. ............+++.+.+..+.+. ....+
T Consensus 24 ~~~~v~llHG~~~~~-~~~~-~~~~~l~-~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~--~~~~~ 98 (276)
T PHA02857 24 PKALVFISHGAGEHS-GRYE-ELAENIS-SLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKST--YPGVP 98 (276)
T ss_pred CCEEEEEeCCCcccc-chHH-HHHHHHH-hCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhh--CCCCC
Confidence 356777789998775 3554 5666554 458999999999998753 1112223333345555555555432 34578
Q ss_pred EEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
++|+||||||.+|..++...+. |.+|+.+.|+
T Consensus 99 ~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~ 131 (276)
T PHA02857 99 VFLLGHSMGATISILAAYKNPNLFTAMILMSPL 131 (276)
T ss_pred EEEEEcCchHHHHHHHHHhCccccceEEEeccc
Confidence 9999999999999976655555 8999999885
No 34
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.11 E-value=2.5e-10 Score=108.41 Aligned_cols=97 Identities=14% Similarity=0.151 Sum_probs=67.1
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
++|++|++|||+++.. .|. .+.+.| . .+++||++|++|+|.+.-.. ..+...++ +.+.+. ..+++
T Consensus 3 g~~~iv~~HG~~~~~~-~~~-~~~~~l-~-~~~~vi~~d~~G~G~s~~~~-~~~~~~~~-------~~~~~~---~~~~~ 67 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAE-VFR-CLDEEL-S-AHFTLHLVDLPGHGRSRGFG-PLSLADAA-------EAIAAQ---APDPA 67 (245)
T ss_pred CCceEEEEcCCCCchh-hHH-HHHHhh-c-cCeEEEEecCCcCccCCCCC-CcCHHHHH-------HHHHHh---CCCCe
Confidence 3478999999988773 664 455555 3 46999999999998753211 12232222 222221 23689
Q ss_pred EEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 189 HMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
+||||||||.+|..++...+. |.+++.+++..
T Consensus 68 ~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 68 IWLGWSLGGLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred EEEEEcHHHHHHHHHHHHCHHhhheeeEecCCc
Confidence 999999999999876666555 99999998764
No 35
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.10 E-value=4e-10 Score=120.07 Aligned_cols=103 Identities=17% Similarity=0.229 Sum_probs=79.0
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhh----cccHHHHHHHHHHHHHHHHHhcCCC
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQA----TANTRLVGLELAYFVNYLKDNYGLN 184 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a----~~n~r~Vg~~la~~I~~L~~~~g~~ 184 (531)
++|++|+||||.++. ..|. .+++.| . ++++||++|++|+|.+.-+.. ..+....++++..+|+.| .
T Consensus 126 ~~~~ivllHG~~~~~-~~w~-~~~~~L-~-~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l------~ 195 (383)
T PLN03084 126 NNPPVLLIHGFPSQA-YSYR-KVLPVL-S-KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL------K 195 (383)
T ss_pred CCCeEEEECCCCCCH-HHHH-HHHHHH-h-cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh------C
Confidence 468999999999876 3675 455555 3 479999999999987543322 346677778888777765 3
Q ss_pred CCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCCC
Q psy545 185 PADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 185 ~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP 221 (531)
.++++|+|||+||.||..++...+. |.+++.++|+.+
T Consensus 196 ~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 196 SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 5789999999999999876666554 999999998753
No 36
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.09 E-value=5.3e-10 Score=119.67 Aligned_cols=109 Identities=16% Similarity=0.165 Sum_probs=71.8
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhh-cccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQA-TANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a-~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
..+|++|++|||..+. ..|...+ +.|.+ +|+|+++||+|+|.+..+.. ..+.....+.+.+.+..+.+.. +.+
T Consensus 103 ~~~p~vvllHG~~~~~-~~~~~~~-~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l--~~~ 176 (402)
T PLN02894 103 EDAPTLVMVHGYGASQ-GFFFRNF-DALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK--NLS 176 (402)
T ss_pred CCCCEEEEECCCCcch-hHHHHHH-HHHHh--CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc--CCC
Confidence 3568999999998765 3565443 55543 69999999999986532221 1122222222222222222222 467
Q ss_pred cEEEEEechhhhhhhhhhhccCC-cceeeecCCCCCc
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEPY 222 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP~ 222 (531)
+++|+||||||.+|..++...+. |.+++.++|++..
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 99999999999999976665554 9999999997643
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.08 E-value=5.4e-10 Score=115.94 Aligned_cols=103 Identities=20% Similarity=0.290 Sum_probs=75.8
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
...|++|++|||.++.. .|.. +...| .. +|+|+++|+++++.+.......+...+++++..+++.+ ...+
T Consensus 129 ~~~~~vl~~HG~~~~~~-~~~~-~~~~l-~~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 198 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLN-NWLF-NHAAL-AA-GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDAL------GIER 198 (371)
T ss_pred CCCCeEEEECCCCCccc-hHHH-HHHHH-hc-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc------CCcc
Confidence 34789999999998874 5653 44545 33 59999999999987543333456666666666665443 4678
Q ss_pred EEEEEechhhhhhhhhhhccC-CcceeeecCCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIE-GLGRITGLDPAE 220 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~-~V~RItgLDPAg 220 (531)
++|+||||||.+|..++...+ .|.+++.++|++
T Consensus 199 ~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 199 AHLVGHSMGGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred EEEEeechHHHHHHHHHHhCchheeEEEEECcCC
Confidence 999999999999997665555 499999998864
No 38
>PRK10985 putative hydrolase; Provisional
Probab=99.06 E-value=7.3e-10 Score=114.68 Aligned_cols=107 Identities=15% Similarity=0.237 Sum_probs=75.2
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCc-hhhhcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPL-YTQATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~-Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
..+|++|++|||.++....|+..++..|.+ .|++|+++|++|++.+. -.....+... ..++..+++++.+.+ +..
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~g~~~~~~~~~~~~~~-~~D~~~~i~~l~~~~--~~~ 131 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQK-RGWLGVVMHFRGCSGEPNRLHRIYHSGE-TEDARFFLRWLQREF--GHV 131 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHH-CCCEEEEEeCCCCCCCccCCcceECCCc-hHHHHHHHHHHHHhC--CCC
Confidence 457899999999987655677777776665 59999999999986432 1111111111 256777777776544 457
Q ss_pred cEEEEEechhhhhhh-hhhhccCC--cceeeecCC
Q psy545 187 DVHMIGHSLGAHTAG-YAGQAIEG--LGRITGLDP 218 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg-~ag~~~~~--V~RItgLDP 218 (531)
+++++||||||.++. ++++..+. |.+++.+.|
T Consensus 132 ~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~ 166 (324)
T PRK10985 132 PTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSA 166 (324)
T ss_pred CEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcC
Confidence 899999999998755 67766543 778777765
No 39
>PRK10566 esterase; Provisional
Probab=99.04 E-value=1.2e-09 Score=107.27 Aligned_cols=104 Identities=16% Similarity=0.094 Sum_probs=70.0
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcc-------cHHHHHHHHHHHHHHHHHh
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATA-------NTRLVGLELAYFVNYLKDN 180 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~-------n~r~Vg~~la~~I~~L~~~ 180 (531)
...|++|++||+.++.. .| ..+.+.|. ..||+|+++|+++++......... ......++++.+++++.+.
T Consensus 25 ~~~p~vv~~HG~~~~~~-~~-~~~~~~l~-~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL-VY-SYFAVALA-QAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREE 101 (249)
T ss_pred CCCCEEEEeCCCCcccc-hH-HHHHHHHH-hCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 45789999999987763 34 34555554 459999999999976421110000 0112235666777777654
Q ss_pred cCCCCCcEEEEEechhhhhhhhhhhccCCcceee
Q psy545 181 YGLNPADVHMIGHSLGAHTAGYAGQAIEGLGRIT 214 (531)
Q Consensus 181 ~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RIt 214 (531)
..++.++|+|+||||||++|..++...+.+...+
T Consensus 102 ~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~ 135 (249)
T PRK10566 102 GWLLDDRLAVGGASMGGMTALGIMARHPWVKCVA 135 (249)
T ss_pred CCcCccceeEEeecccHHHHHHHHHhCCCeeEEE
Confidence 4467899999999999999998776655544333
No 40
>KOG4409|consensus
Probab=99.04 E-value=6.4e-10 Score=115.16 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=76.2
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHh-cCCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDN-YGLNPA 186 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~-~g~~~~ 186 (531)
..++++|+||||+++. .-|+..+ +.|.+ ..||+++||.|.|.+.-+.-..+... ...+|++.+.+- ...+++
T Consensus 88 ~~~~plVliHGyGAg~-g~f~~Nf-~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~---~e~~fvesiE~WR~~~~L~ 160 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGL-GLFFRNF-DDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTT---AEKEFVESIEQWRKKMGLE 160 (365)
T ss_pred cCCCcEEEEeccchhH-HHHHHhh-hhhhh--cCceEEecccCCCCCCCCCCCCCccc---chHHHHHHHHHHHHHcCCc
Confidence 6778899999999876 3677666 45643 79999999999886432221111111 111455544331 134678
Q ss_pred cEEEEEechhhhhhh-hhhhccCCcceeeecCCCCCc
Q psy545 187 DVHMIGHSLGAHTAG-YAGQAIEGLGRITGLDPAEPY 222 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg-~ag~~~~~V~RItgLDPAgP~ 222 (531)
++.|+||||||.+|. ||-++...|..++..||+|-.
T Consensus 161 KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 161 KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFP 197 (365)
T ss_pred ceeEeeccchHHHHHHHHHhChHhhceEEEecccccc
Confidence 999999999999987 677777779999999999743
No 41
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.03 E-value=4.5e-10 Score=116.96 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=67.9
Q ss_pred CceEEEEccCCCCCCc-----------hhHHHHHH---HHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHH
Q psy545 110 KKTKFIIHGFIDTPLS-----------SWVKEMRR---ELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVN 175 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~-----------~w~~~l~~---aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~ 175 (531)
++++|+|||+.++... .|- .++. .|.. .+|+||++|++|++.+. . ....+...++++..+++
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~-~~v~~~~~L~~-~~~~Vi~~Dl~G~g~s~-~-~~~~~~~~a~dl~~ll~ 132 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWE-GLVGSGRALDP-ARFRLLAFDFIGADGSL-D-VPIDTADQADAIALLLD 132 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcch-hccCCCCccCc-cccEEEEEeCCCCCCCC-C-CCCCHHHHHHHHHHHHH
Confidence 3346777776655432 343 3443 3433 47999999999987542 1 12345556777777766
Q ss_pred HHHHhcCCCCCc-EEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 176 YLKDNYGLNPAD-VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 176 ~L~~~~g~~~~~-vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
.| ..++ ++||||||||.||..++...+. |.+++.++++.
T Consensus 133 ~l------~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 133 AL------GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred Hc------CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 54 4556 5799999999999976655554 99999999864
No 42
>PRK11071 esterase YqiA; Provisional
Probab=99.02 E-value=9.4e-10 Score=105.98 Aligned_cols=90 Identities=23% Similarity=0.289 Sum_probs=62.5
Q ss_pred ceEEEEccCCCCCCchhHHHHHHHHhcC--CCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 111 KTKFIIHGFIDTPLSSWVKEMRRELLKH--SDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 111 ptvviIHGw~~s~~~~w~~~l~~aLL~~--~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
|++|+||||.++.. .|-......++.. .+++|+++|+++++ .++++++..+.+.. ..+++
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~--~~~~~ 63 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEH--GGDPL 63 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHc--CCCCe
Confidence 68999999999885 5654333344432 37999999999752 12333444444433 35789
Q ss_pred EEEEechhhhhhhhhhhccCCcceeeecCCCC
Q psy545 189 HMIGHSLGAHTAGYAGQAIEGLGRITGLDPAE 220 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~~V~RItgLDPAg 220 (531)
+|+||||||.+|..++...+ + +++.++|+.
T Consensus 64 ~lvG~S~Gg~~a~~~a~~~~-~-~~vl~~~~~ 93 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQCFM-L-PAVVVNPAV 93 (190)
T ss_pred EEEEECHHHHHHHHHHHHcC-C-CEEEECCCC
Confidence 99999999999997766655 2 567788863
No 43
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.99 E-value=2.3e-09 Score=109.64 Aligned_cols=102 Identities=14% Similarity=0.070 Sum_probs=69.5
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh--hcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ--ATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~--a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
+.+++|+|||+.++... | .+.. ++...+|+||++|++|+|.+.-.. ...+...+++++..+++.+ ..+
T Consensus 26 ~~~~lvllHG~~~~~~~-~--~~~~-~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~ 95 (306)
T TIGR01249 26 DGKPVVFLHGGPGSGTD-P--GCRR-FFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL------GIK 95 (306)
T ss_pred CCCEEEEECCCCCCCCC-H--HHHh-ccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc------CCC
Confidence 35679999999877532 2 2333 233347999999999998654221 1234445555655555443 467
Q ss_pred cEEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
+++++||||||.+|..++...+. |.+++.++++.
T Consensus 96 ~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 96 NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred CEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 89999999999999876655554 89999888753
No 44
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.99 E-value=2.3e-09 Score=114.67 Aligned_cols=108 Identities=19% Similarity=0.243 Sum_probs=78.0
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh-hcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ-ATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~-a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
..++++|++|||.++. ..| ..+.+.|.+ .||+|+++||+|+|.+.-.. .........+++..+++.+.... +..
T Consensus 134 ~~~~~Vl~lHG~~~~~-~~~-~~~a~~L~~-~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~ 208 (395)
T PLN02652 134 EMRGILIIIHGLNEHS-GRY-LHFAKQLTS-CGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN--PGV 208 (395)
T ss_pred CCceEEEEECCchHHH-HHH-HHHHHHHHH-CCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC--CCC
Confidence 3467999999998765 234 356666654 58999999999998654221 12245566778888888886432 335
Q ss_pred cEEEEEechhhhhhhhhhhccC---CcceeeecCCCC
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIE---GLGRITGLDPAE 220 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~---~V~RItgLDPAg 220 (531)
+++|+||||||.+|..++.+.. .|..++...|+.
T Consensus 209 ~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 209 PCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred CEEEEEECHHHHHHHHHHhccCcccccceEEEECccc
Confidence 7999999999999987766543 388888887763
No 45
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.94 E-value=5.4e-09 Score=93.42 Aligned_cols=93 Identities=17% Similarity=0.343 Sum_probs=69.2
Q ss_pred eEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEE
Q psy545 112 TKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMI 191 (531)
Q Consensus 112 tvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLI 191 (531)
+||++||+.++.. .| ..+.+.|.+. ||+|+++|+++.+..... ..+.++++.+..... +.+++.|+
T Consensus 1 ~vv~~HG~~~~~~-~~-~~~~~~l~~~-G~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~i~l~ 66 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DY-QPLAEALAEQ-GYAVVAFDYPGHGDSDGA----------DAVERVLADIRAGYP-DPDRIILI 66 (145)
T ss_dssp EEEEECTTTTTTH-HH-HHHHHHHHHT-TEEEEEESCTTSTTSHHS----------HHHHHHHHHHHHHHC-TCCEEEEE
T ss_pred CEEEECCCCCCHH-HH-HHHHHHHHHC-CCEEEEEecCCCCccchh----------HHHHHHHHHHHhhcC-CCCcEEEE
Confidence 5899999998863 45 4677777665 999999999988765211 144444555422223 78999999
Q ss_pred EechhhhhhhhhhhccCCcceeeecCC
Q psy545 192 GHSLGAHTAGYAGQAIEGLGRITGLDP 218 (531)
Q Consensus 192 GHSLGAhVAg~ag~~~~~V~RItgLDP 218 (531)
||||||.+|..++...+.|..++.+.|
T Consensus 67 G~S~Gg~~a~~~~~~~~~v~~~v~~~~ 93 (145)
T PF12695_consen 67 GHSMGGAIAANLAARNPRVKAVVLLSP 93 (145)
T ss_dssp EETHHHHHHHHHHHHSTTESEEEEESE
T ss_pred EEccCcHHHHHHhhhccceeEEEEecC
Confidence 999999999976665566999999988
No 46
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.93 E-value=1.8e-09 Score=112.77 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=70.6
Q ss_pred CCceEEEEccCCCCCCch---------hHHHHH---HHHhcCCCeEEEEEeCCC--CCCCc----------hhh--hccc
Q psy545 109 KKKTKFIIHGFIDTPLSS---------WVKEMR---RELLKHSDWNVIVVDWAG--GSLPL----------YTQ--ATAN 162 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~---------w~~~l~---~aLL~~~d~NVI~VDw~g--~~~~~----------Y~~--a~~n 162 (531)
+.|+||++||+.++.... |...++ .+|+. .+|.||++|.+| ++.+. |.. ....
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~ 108 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT-DRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLIT 108 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC-CceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCc
Confidence 357899999999976321 333332 23433 589999999999 44321 110 1234
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCc-EEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 163 TRLVGLELAYFVNYLKDNYGLNPAD-VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 163 ~r~Vg~~la~~I~~L~~~~g~~~~~-vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
+...+++++.+++.| ..++ ++|+||||||.+|..++...+. |.+++.++++
T Consensus 109 ~~~~~~~~~~~~~~l------~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 109 IRDDVKAQKLLLDHL------GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred HHHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 566666666666543 4577 9999999999999965555554 9999999975
No 47
>KOG4178|consensus
Probab=98.93 E-value=3.9e-09 Score=108.76 Aligned_cols=107 Identities=17% Similarity=0.222 Sum_probs=82.9
Q ss_pred CCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh--hcccHHHHHHHHHHHHHHHHHhcCC
Q psy545 106 FDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ--ATANTRLVGLELAYFVNYLKDNYGL 183 (531)
Q Consensus 106 fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~--a~~n~r~Vg~~la~~I~~L~~~~g~ 183 (531)
...+.|+++++|||..+.. +|-.++ ..|. ..+++||++|.+|.|.+.-+. ...++..++.++..+|+.|
T Consensus 40 g~~~gP~illlHGfPe~wy-swr~q~-~~la-~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L------ 110 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWY-SWRHQI-PGLA-SRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL------ 110 (322)
T ss_pred cCCCCCEEEEEccCCccch-hhhhhh-hhhh-hcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh------
Confidence 5668999999999999874 787665 3454 446999999999998754333 3456677777887777766
Q ss_pred CCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCCC
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP 221 (531)
..++++|+||++||.||..++...+. |.+++.+.-..+
T Consensus 111 g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 111 GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 37999999999999999987777665 888888764444
No 48
>PLN00021 chlorophyllase
Probab=98.90 E-value=6.1e-09 Score=108.20 Aligned_cols=103 Identities=17% Similarity=0.263 Sum_probs=67.7
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHH--------
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKD-------- 179 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~-------- 179 (531)
...|++|++|||..+.. |...+.+.|.+ .||.|+++|+.+.+...... ... +..++++++.+
T Consensus 50 g~~PvVv~lHG~~~~~~--~y~~l~~~Las-~G~~VvapD~~g~~~~~~~~---~i~----d~~~~~~~l~~~l~~~l~~ 119 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNS--FYSQLLQHIAS-HGFIVVAPQLYTLAGPDGTD---EIK----DAAAVINWLSSGLAAVLPE 119 (313)
T ss_pred CCCCEEEEECCCCCCcc--cHHHHHHHHHh-CCCEEEEecCCCcCCCCchh---hHH----HHHHHHHHHHhhhhhhccc
Confidence 35789999999987652 34456666654 58999999998754322111 111 22222333322
Q ss_pred hcCCCCCcEEEEEechhhhhhhhhhhccC------CcceeeecCCCC
Q psy545 180 NYGLNPADVHMIGHSLGAHTAGYAGQAIE------GLGRITGLDPAE 220 (531)
Q Consensus 180 ~~g~~~~~vhLIGHSLGAhVAg~ag~~~~------~V~RItgLDPAg 220 (531)
....++++++|+||||||++|..++...+ .+..++++||..
T Consensus 120 ~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 120 GVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred ccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 12346789999999999999987654433 378999999964
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.88 E-value=1.6e-08 Score=102.34 Aligned_cols=107 Identities=14% Similarity=0.092 Sum_probs=74.7
Q ss_pred CCceEEEEccCCCCCCchh--HHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 109 KKKTKFIIHGFIDTPLSSW--VKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w--~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
.++.+|+|||+.+.....| ...+.+.|.+ .|++|+++|++|+|.+.-. .........++..+++.|.+... ..+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~-~G~~v~~~Dl~G~G~S~~~--~~~~~~~~~d~~~~~~~l~~~~~-g~~ 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAE-AGFPVLRFDYRGMGDSEGE--NLGFEGIDADIAAAIDAFREAAP-HLR 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHH-CCCEEEEeCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHhhCC-CCC
Confidence 4567899999775432112 2345665544 5899999999999875311 12344556788888888865421 247
Q ss_pred cEEEEEechhhhhhhhhhhccCCcceeeecCCC
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIEGLGRITGLDPA 219 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~~V~RItgLDPA 219 (531)
+++|+||||||.+|..++...+.|.+|+.++|.
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~ 133 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPADLRVAGLVLLNPW 133 (274)
T ss_pred cEEEEEECHHHHHHHHHhhhCCCccEEEEECCc
Confidence 899999999999998776554559999999874
No 50
>KOG2564|consensus
Probab=98.86 E-value=8.9e-09 Score=103.79 Aligned_cols=108 Identities=17% Similarity=0.285 Sum_probs=82.4
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchh-hhcccHHHHHHHHHHHHHHHHHhcCCCC
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYT-QATANTRLVGLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~-~a~~n~r~Vg~~la~~I~~L~~~~g~~~ 185 (531)
.+..|.+++.||.+.++. +|. .++.+|...-...|+++|+||||.+-.. .........++++..+|+.| +|-.+
T Consensus 71 ~t~gpil~l~HG~G~S~L-SfA-~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~---fge~~ 145 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSAL-SFA-IFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKEL---FGELP 145 (343)
T ss_pred CCCccEEEEeecCcccch-hHH-HHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHH---hccCC
Confidence 357899999999998884 664 5667788777899999999999975322 22345566778888888777 45578
Q ss_pred CcEEEEEechhhhhhhhh--hhccCCcceeeecCCC
Q psy545 186 ADVHMIGHSLGAHTAGYA--GQAIEGLGRITGLDPA 219 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~a--g~~~~~V~RItgLDPA 219 (531)
.+|.||||||||.||.+. .+.++.+..|+-+|-.
T Consensus 146 ~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 146 PQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVV 181 (343)
T ss_pred CceEEEeccccchhhhhhhhhhhchhhhceEEEEEe
Confidence 899999999999999864 3455667778877754
No 51
>PRK07581 hypothetical protein; Validated
Probab=98.86 E-value=4.5e-09 Score=108.83 Aligned_cols=107 Identities=11% Similarity=0.062 Sum_probs=65.5
Q ss_pred CceEEEEccCCCCCCchhHHHHH--HHHhcCCCeEEEEEeCCCCCCCchhhh--------cccHHHHHHHHHHHHHHHHH
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMR--RELLKHSDWNVIVVDWAGGSLPLYTQA--------TANTRLVGLELAYFVNYLKD 179 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~--~aLL~~~d~NVI~VDw~g~~~~~Y~~a--------~~n~r~Vg~~la~~I~~L~~ 179 (531)
.|++|++||+.++.. .|...+. ++|. ..+|+||++|++|+|.+..+.. ......++.+++.+...|.+
T Consensus 41 ~~~vll~~~~~~~~~-~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 118 (339)
T PRK07581 41 DNAILYPTWYSGTHQ-DNEWLIGPGRALD-PEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE 118 (339)
T ss_pred CCEEEEeCCCCCCcc-cchhhccCCCccC-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH
Confidence 345666666665542 3432111 2333 3479999999999986542221 11111244555554443444
Q ss_pred hcCCCCCc-EEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 180 NYGLNPAD-VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 180 ~~g~~~~~-vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
.. ..++ +|||||||||.||..++...+. |.+++.++.+.
T Consensus 119 ~l--gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 119 KF--GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred Hh--CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 33 4578 5899999999999976666665 99999998653
No 52
>KOG1454|consensus
Probab=98.85 E-value=8.6e-09 Score=107.68 Aligned_cols=102 Identities=24% Similarity=0.323 Sum_probs=71.8
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCC-CCchhhhc-ccHHHHHHHHHHHHHHHHHhcCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGS-LPLYTQAT-ANTRLVGLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~-~~~Y~~a~-~n~r~Vg~~la~~I~~L~~~~g~~~ 185 (531)
..+|++|+||||.++. ..|...+ ..|....|+.|.++|..|+| .+..+... ...+ +....|..+..+. ..
T Consensus 56 ~~~~pvlllHGF~~~~-~~w~~~~-~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~----~~v~~i~~~~~~~--~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASS-FSWRRVV-PLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLR----ELVELIRRFVKEV--FV 127 (326)
T ss_pred CCCCcEEEeccccCCc-ccHhhhc-cccccccceEEEEEecCCCCcCCCCCCCCceehh----HHHHHHHHHHHhh--cC
Confidence 5688999999999966 5786544 44554445999999999988 44444332 2333 3333344443333 35
Q ss_pred CcEEEEEechhhhhhhhhhhccCC-cceeeecC
Q psy545 186 ADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLD 217 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLD 217 (531)
+++||+||||||.+|..++..++. |..+++||
T Consensus 128 ~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~ 160 (326)
T KOG1454|consen 128 EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLD 160 (326)
T ss_pred cceEEEEeCcHHHHHHHHHHhCcccccceeeec
Confidence 679999999999999976666666 99999887
No 53
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.85 E-value=6.8e-09 Score=110.01 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=72.1
Q ss_pred CceEEEEccCCCCCCc-----------hhHHHHH---HHHhcCCCeEEEEEeCCCC--CCCc-----------hhh--hc
Q psy545 110 KKTKFIIHGFIDTPLS-----------SWVKEMR---RELLKHSDWNVIVVDWAGG--SLPL-----------YTQ--AT 160 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~-----------~w~~~l~---~aLL~~~d~NVI~VDw~g~--~~~~-----------Y~~--a~ 160 (531)
.|+||++||+.++... .|...++ .+|+. .+|+||++|++|+ +.+. |.. ..
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT-DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc-cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 6899999999998742 1333333 13433 5899999999873 2211 100 13
Q ss_pred ccHHHHHHHHHHHHHHHHHhcCCCCCc-EEEEEechhhhhhhhhhhccCC-cceeeecCCCCC
Q psy545 161 ANTRLVGLELAYFVNYLKDNYGLNPAD-VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 161 ~n~r~Vg~~la~~I~~L~~~~g~~~~~-vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP 221 (531)
.++...++++..+++.| ..++ ++|+||||||.+|..++...+. |.+++.++++.+
T Consensus 127 ~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL------GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHHh------CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 45666777777777654 4577 5999999999999876655554 999999997653
No 54
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.85 E-value=2.9e-09 Score=98.41 Aligned_cols=111 Identities=32% Similarity=0.436 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC-----CcceeeecCCCCCccCCCCCCCCCCccchhhh
Q psy545 166 VGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE-----GLGRITGLDPAEPYFQGMPPFARLDPTDADLV 240 (531)
Q Consensus 166 Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~-----~V~RItgLDPAgP~F~~~~~~~rLd~sDA~fV 240 (531)
+...+...++....+ .+..+++++||||||+||..++..+. .+.++++++|+.++...... ..+...++.+|
T Consensus 10 ~~~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~-~~~~~~~~~~~ 86 (153)
T cd00741 10 LANLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE-DRLDPSDALFV 86 (153)
T ss_pred HHHHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH-HhhhccCCccE
Confidence 445555555544332 36789999999999999999887663 27889999999987654211 34667889999
Q ss_pred HHhhhcCCccccccc-ccccccccccccCCCCCCCCCCCC
Q psy545 241 DVIHTDGSSIFLLGY-GMSETCGHLDFYPNNGKEQPGCDL 279 (531)
Q Consensus 241 DvIHTd~~~~~~~g~-G~~~p~GHvDFYPNGG~~QPGC~~ 279 (531)
..||++.+.++.+.. ......++.+||.|++..++-|..
T Consensus 87 ~~i~~~~D~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (153)
T cd00741 87 DRIVNDNDIVPRLPPGGEGYPHGGAEFYINGGKSQPGCCK 126 (153)
T ss_pred EEEEECCCccCCCCCCcCCCeecceEEEECCCCCCCcccc
Confidence 999999997665433 334577899999999998877743
No 55
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.83 E-value=1.6e-08 Score=104.28 Aligned_cols=104 Identities=17% Similarity=0.189 Sum_probs=76.5
Q ss_pred ceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCc--hhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 111 KTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPL--YTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 111 ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~--Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
.+||++||+.++.. .| ..+++.|.. .||.|++.||+|+|.+. ......+...+-.++..+++.+... ....++
T Consensus 35 g~Vvl~HG~~Eh~~-ry-~~la~~l~~-~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~--~~~~p~ 109 (298)
T COG2267 35 GVVVLVHGLGEHSG-RY-EELADDLAA-RGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEP--DPGLPV 109 (298)
T ss_pred cEEEEecCchHHHH-HH-HHHHHHHHh-CCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhcc--CCCCCe
Confidence 68999999999874 34 346676665 59999999999999864 2222334556667777777776432 256899
Q ss_pred EEEEechhhhhhhhhhh-ccCCcceeeecCCC
Q psy545 189 HMIGHSLGAHTAGYAGQ-AIEGLGRITGLDPA 219 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~-~~~~V~RItgLDPA 219 (531)
+|+||||||-||..+.. ....|.+++...|+
T Consensus 110 ~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~ 141 (298)
T COG2267 110 FLLGHSMGGLIALLYLARYPPRIDGLVLSSPA 141 (298)
T ss_pred EEEEeCcHHHHHHHHHHhCCccccEEEEECcc
Confidence 99999999999986544 44458888888776
No 56
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.81 E-value=1.8e-08 Score=104.01 Aligned_cols=102 Identities=24% Similarity=0.399 Sum_probs=76.6
Q ss_pred CCCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCC
Q psy545 105 NFDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLN 184 (531)
Q Consensus 105 ~fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~ 184 (531)
.-+..+|++|++||..++..+.++..|..++.++ |+.|+++||||++...-........-.-.+++.++++|... ..
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~r-g~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~--~~ 146 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRR-GWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKAR--FP 146 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhc-CCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHh--CC
Confidence 3456679999999999998888999999888764 79999999999875321111111111226888899998653 36
Q ss_pred CCcEEEEEechhh-hhhhhhhhccCC
Q psy545 185 PADVHMIGHSLGA-HTAGYAGQAIEG 209 (531)
Q Consensus 185 ~~~vhLIGHSLGA-hVAg~ag~~~~~ 209 (531)
..++..+|+|||| ++|-|.|+.-..
T Consensus 147 ~r~~~avG~SLGgnmLa~ylgeeg~d 172 (345)
T COG0429 147 PRPLYAVGFSLGGNMLANYLGEEGDD 172 (345)
T ss_pred CCceEEEEecccHHHHHHHHHhhccC
Confidence 7899999999999 778899887543
No 57
>PRK05855 short chain dehydrogenase; Validated
Probab=98.81 E-value=1.4e-08 Score=111.40 Aligned_cols=90 Identities=19% Similarity=0.307 Sum_probs=65.2
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh--hcccHHHHHHHHHHHHHHHHHhcCCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ--ATANTRLVGLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~--a~~n~r~Vg~~la~~I~~L~~~~g~~~ 185 (531)
+++|++|++|||.++. ..|.. +.+.| . .+|+|+++|++|+|.+.... ........++++..+++.+ + ..
T Consensus 23 ~~~~~ivllHG~~~~~-~~w~~-~~~~L-~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l----~-~~ 93 (582)
T PRK05855 23 PDRPTVVLVHGYPDNH-EVWDG-VAPLL-A-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV----S-PD 93 (582)
T ss_pred CCCCeEEEEcCCCchH-HHHHH-HHHHh-h-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh----C-CC
Confidence 3478999999998876 35654 45544 3 57999999999998764322 2345677788888888765 2 12
Q ss_pred CcEEEEEechhhhhhhhhhhc
Q psy545 186 ADVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~ag~~ 206 (531)
.+++|+||||||.+|..++..
T Consensus 94 ~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 94 RPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CcEEEEecChHHHHHHHHHhC
Confidence 349999999999988755544
No 58
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.80 E-value=1.8e-08 Score=124.53 Aligned_cols=101 Identities=20% Similarity=0.344 Sum_probs=76.5
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh--------hcccHHHHHHHHHHHHHHHHHh
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ--------ATANTRLVGLELAYFVNYLKDN 180 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~--------a~~n~r~Vg~~la~~I~~L~~~ 180 (531)
.+|++|+||||.++.. .|.. +...|. .+++||++|++|+|.+.... ...++..++.++..+++.+
T Consensus 1370 ~~~~vVllHG~~~s~~-~w~~-~~~~L~--~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l--- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DWIP-IMKAIS--GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI--- 1442 (1655)
T ss_pred CCCeEEEECCCCCCHH-HHHH-HHHHHh--CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---
Confidence 4689999999999884 6865 445553 36999999999998654321 1345677777777776654
Q ss_pred cCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 181 YGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 181 ~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
..++++|+||||||.||..++...+. |.+++.+++.
T Consensus 1443 ---~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1443 ---TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred ---CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 46799999999999999976665554 9999999875
No 59
>PRK13604 luxD acyl transferase; Provisional
Probab=98.79 E-value=2.9e-08 Score=102.60 Aligned_cols=107 Identities=20% Similarity=0.136 Sum_probs=75.5
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCC-CCC--chhhhcccHHHHHHHHHHHHHHHHHhcCC
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGG-SLP--LYTQATANTRLVGLELAYFVNYLKDNYGL 183 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~-~~~--~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~ 183 (531)
+...+++|+.|||+++.. ....+++.|. ..|++|+.+|.+++ |.+ .|....... -..++...|++|.+.
T Consensus 34 ~~~~~~vIi~HGf~~~~~--~~~~~A~~La-~~G~~vLrfD~rg~~GeS~G~~~~~t~s~--g~~Dl~aaid~lk~~--- 105 (307)
T PRK13604 34 PKKNNTILIASGFARRMD--HFAGLAEYLS-SNGFHVIRYDSLHHVGLSSGTIDEFTMSI--GKNSLLTVVDWLNTR--- 105 (307)
T ss_pred CCCCCEEEEeCCCCCChH--HHHHHHHHHH-HCCCEEEEecCCCCCCCCCCccccCcccc--cHHHHHHHHHHHHhc---
Confidence 456689999999999752 3556776555 46999999999876 543 332111111 236777788998653
Q ss_pred CCCcEEEEEechhhhhhhhhhhccCCcceeeecCCCCCc
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQAIEGLGRITGLDPAEPY 222 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItgLDPAgP~ 222 (531)
..+++.|+||||||.+|..++...+ +..++..-|+..+
T Consensus 106 ~~~~I~LiG~SmGgava~~~A~~~~-v~~lI~~sp~~~l 143 (307)
T PRK13604 106 GINNLGLIAASLSARIAYEVINEID-LSFLITAVGVVNL 143 (307)
T ss_pred CCCceEEEEECHHHHHHHHHhcCCC-CCEEEEcCCcccH
Confidence 3578999999999999976665433 8888888887663
No 60
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.79 E-value=2.7e-08 Score=107.06 Aligned_cols=108 Identities=16% Similarity=0.126 Sum_probs=71.6
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
...|+||+.||+.+.....|. .+.+.|. ..||+|+++|++|+|.+.......+..... ..++++|.....++.++
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~~-~~~~~La-~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~---~avld~l~~~~~vd~~r 266 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYYR-LFRDYLA-PRGIAMLTIDMPSVGFSSKWKLTQDSSLLH---QAVLNALPNVPWVDHTR 266 (414)
T ss_pred CCccEEEEeCCcccchhhhHH-HHHHHHH-hCCCEEEEECCCCCCCCCCCCccccHHHHH---HHHHHHHHhCcccCccc
Confidence 346777777776654434554 3455555 459999999999987642211112222222 34566665444567899
Q ss_pred EEEEEechhhhhhhhhhhccC-CcceeeecCCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIE-GLGRITGLDPAE 220 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~-~V~RItgLDPAg 220 (531)
|.|+||||||++|..++...+ .|..++.++|..
T Consensus 267 i~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 267 VAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred EEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 999999999999998766544 599999988763
No 61
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.76 E-value=9.6e-08 Score=96.77 Aligned_cols=108 Identities=14% Similarity=0.212 Sum_probs=67.0
Q ss_pred CceEEEEccCCCCCCchhHHH-HHHHHhcCCCeEEEEEeCCC--CCC-------------Cchhhhcc-----cHHHHHH
Q psy545 110 KKTKFIIHGFIDTPLSSWVKE-MRRELLKHSDWNVIVVDWAG--GSL-------------PLYTQATA-----NTRLVGL 168 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~-l~~aLL~~~d~NVI~VDw~g--~~~-------------~~Y~~a~~-----n~r~Vg~ 168 (531)
.|+++++||+.++.. .|... ....+++..++.||++|... .+. ..|..... ... .-.
T Consensus 42 ~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~-~~~ 119 (275)
T TIGR02821 42 VPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYR-MYS 119 (275)
T ss_pred CCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccch-HHH
Confidence 599999999998874 56432 13356555689999999842 221 11211100 001 112
Q ss_pred HHH-HHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 169 ELA-YFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 169 ~la-~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
.++ +++..+...++++.+++.|+||||||++|..++...+. +..++.+.|+
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 222 22222333356788999999999999999987766555 7777777665
No 62
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.76 E-value=2.5e-08 Score=96.95 Aligned_cols=109 Identities=14% Similarity=0.150 Sum_probs=73.3
Q ss_pred CCCceEEEEccCCCCCCchhHH--HHHHHHhcCCCeEEEEEeCCCCCCC--c---hhhhc-ccHHHHHHHHHHHHHHHHH
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVK--EMRRELLKHSDWNVIVVDWAGGSLP--L---YTQAT-ANTRLVGLELAYFVNYLKD 179 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~--~l~~aLL~~~d~NVI~VDw~g~~~~--~---Y~~a~-~n~r~Vg~~la~~I~~L~~ 179 (531)
...|++|++||+.++.. .+.. .+. .++++.++.|+++|.++++.. . |.... .....-..++..+|+.+.+
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~-~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWK-AAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChH-HHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 45799999999987753 2321 122 345556899999999886431 1 11110 0001123467778888887
Q ss_pred hcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCC
Q psy545 180 NYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDP 218 (531)
Q Consensus 180 ~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDP 218 (531)
.++++.++++|+|||+||.+|..++...+. +..++.+..
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g 128 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAG 128 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecC
Confidence 778888999999999999999877665555 677766654
No 63
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.72 E-value=3e-08 Score=98.12 Aligned_cols=100 Identities=21% Similarity=0.363 Sum_probs=62.9
Q ss_pred ceEEEEccCCCCCCchhHHHHHHHHhcCCCeE---EEEEeCCCCCCCchhh-hcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 111 KTKFIIHGFIDTPLSSWVKEMRRELLKHSDWN---VIVVDWAGGSLPLYTQ-ATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 111 ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~N---VI~VDw~g~~~~~Y~~-a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
.+||||||..++....|. .+++.|.+ .||. |.+++|.......... ....... +++|+.||+.+....| .
T Consensus 2 ~PVVlVHG~~~~~~~~w~-~~~~~l~~-~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~-~~~l~~fI~~Vl~~TG--a- 75 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWS-TLAPYLKA-AGYCDSEVYALTYGSGNGSPSVQNAHMSCES-AKQLRAFIDAVLAYTG--A- 75 (219)
T ss_dssp --EEEE--TTTTTCGGCC-HHHHHHHH-TT--CCCEEEE--S-CCHHTHHHHHHB-HHH-HHHHHHHHHHHHHHHT----
T ss_pred CCEEEECCCCcchhhCHH-HHHHHHHH-cCCCcceeEeccCCCCCCCCcccccccchhh-HHHHHHHHHHHHHhhC--C-
Confidence 368999999987767886 45665655 5899 8999997665422222 2223443 4899999999887776 3
Q ss_pred cEEEEEechhhhhhhhhhhccCCcceeeec
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIEGLGRITGL 216 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~~V~RItgL 216 (531)
+|.|||||||+.+|-++-+...++.....|
T Consensus 76 kVDIVgHS~G~~iaR~yi~~~~~~d~~~~l 105 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKGGGGADKVVNL 105 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHHCTGGGTEEE-
T ss_pred EEEEEEcCCcCHHHHHHHHHcCCCCcccCc
Confidence 999999999999999887766545544444
No 64
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.71 E-value=9.2e-08 Score=89.15 Aligned_cols=102 Identities=21% Similarity=0.285 Sum_probs=68.3
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCC-CeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHS-DWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~-d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
.|+++++||+.++.. .|...+ ..+.... .++|+++|+++++.+. .. .......+..+..+++.+ ...++
T Consensus 21 ~~~i~~~hg~~~~~~-~~~~~~-~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~------~~~~~ 90 (282)
T COG0596 21 GPPLVLLHGFPGSSS-VWRPVF-KVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDAL------GLEKV 90 (282)
T ss_pred CCeEEEeCCCCCchh-hhHHHH-HHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHh------CCCce
Confidence 458999999998874 565422 2222211 2899999999988764 11 111222245555555533 34559
Q ss_pred EEEEechhhhhhhhhhhccCC-cceeeecCCCCC
Q psy545 189 HMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP 221 (531)
+|+|||+||.++..++...+. +.+++.++|..+
T Consensus 91 ~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 91 VLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred EEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 999999999999876666665 999999998764
No 65
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.69 E-value=8.5e-08 Score=94.06 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=81.3
Q ss_pred cCCCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCC
Q psy545 104 SNFDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGL 183 (531)
Q Consensus 104 s~fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~ 183 (531)
+.|..++..+++||||+++..+ ++.|.+. |+..||.|.++.++|||...-.--..+.+.-=+++-.-.++|.++
T Consensus 9 f~f~~G~~AVLllHGFTGt~~D--vr~Lgr~-L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~--- 82 (243)
T COG1647 9 FTFEGGNRAVLLLHGFTGTPRD--VRMLGRY-LNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA--- 82 (243)
T ss_pred eeeccCCEEEEEEeccCCCcHH--HHHHHHH-HHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc---
Confidence 3466677889999999999743 6667664 455699999999999997531111223343444555556777532
Q ss_pred CCCcEEEEEechhhhhhhhhhhccCCcceeeecCCCCC
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQAIEGLGRITGLDPAEP 221 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItgLDPAgP 221 (531)
..+.|.++|.||||-+|+.+|.+++ +.+|+.|.++--
T Consensus 83 gy~eI~v~GlSmGGv~alkla~~~p-~K~iv~m~a~~~ 119 (243)
T COG1647 83 GYDEIAVVGLSMGGVFALKLAYHYP-PKKIVPMCAPVN 119 (243)
T ss_pred CCCeEEEEeecchhHHHHHHHhhCC-ccceeeecCCcc
Confidence 4689999999999999999999888 899998876543
No 66
>KOG2382|consensus
Probab=98.68 E-value=8.9e-08 Score=98.76 Aligned_cols=125 Identities=16% Similarity=0.254 Sum_probs=92.4
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
...|+++++||..++. .+|. .+...|-..-+..|++||.+.||.+++. .+.+-..++.++..||+..... ....+
T Consensus 50 ~~~Pp~i~lHGl~GS~-~Nw~-sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-~~h~~~~ma~dv~~Fi~~v~~~--~~~~~ 124 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK-ENWR-SVAKNLSRKLGRDVYAVDVRNHGSSPKI-TVHNYEAMAEDVKLFIDGVGGS--TRLDP 124 (315)
T ss_pred CCCCceEEecccccCC-CCHH-HHHHHhcccccCceEEEecccCCCCccc-cccCHHHHHHHHHHHHHHcccc--cccCC
Confidence 3678999999999998 5885 5667777777889999999999988764 4566777888999888875321 24688
Q ss_pred EEEEEechhh-hhhhhhhhccC-CcceeeecCCCCCccCCCCCCCCCCccchhhhHHhhhc
Q psy545 188 VHMIGHSLGA-HTAGYAGQAIE-GLGRITGLDPAEPYFQGMPPFARLDPTDADLVDVIHTD 246 (531)
Q Consensus 188 vhLIGHSLGA-hVAg~ag~~~~-~V~RItgLDPAgP~F~~~~~~~rLd~sDA~fVDvIHTd 246 (531)
+.|+|||||| .+|.......+ .+.|++-+|-+ |. ...++.+++.++|-+=
T Consensus 125 ~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~s-P~--------~~~~~~~e~~e~i~~m 176 (315)
T KOG2382|consen 125 VVLLGHSMGGVKVAMAETLKKPDLIERLIVEDIS-PG--------GVGRSYGEYRELIKAM 176 (315)
T ss_pred ceecccCcchHHHHHHHHHhcCcccceeEEEecC-Cc--------cCCcccchHHHHHHHH
Confidence 9999999999 55554333333 38898888854 22 2455677777777553
No 67
>KOG1455|consensus
Probab=98.67 E-value=1.3e-07 Score=96.62 Aligned_cols=115 Identities=15% Similarity=0.149 Sum_probs=80.7
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh-hcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ-ATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~-a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
.+-.|+++|||++... ..++.++..|. ..|+-|+++||.|||.+.-.. -+.+...+..++-.+++.+.......--.
T Consensus 53 pr~lv~~~HG~g~~~s-~~~~~~a~~l~-~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp 130 (313)
T KOG1455|consen 53 PRGLVFLCHGYGEHSS-WRYQSTAKRLA-KSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLP 130 (313)
T ss_pred CceEEEEEcCCcccch-hhHHHHHHHHH-hCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCC
Confidence 3557999999998763 22344665554 469999999999998754221 24567777788888887654433334456
Q ss_pred EEEEEechhhhhhhhhhhccCC-cceeeecCCCCCccCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEPYFQG 225 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP~F~~ 225 (531)
..|.||||||.||..++..-++ ..+.++..|.-+.-+.
T Consensus 131 ~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~ 169 (313)
T KOG1455|consen 131 RFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISED 169 (313)
T ss_pred eeeeecCcchHHHHHHHhhCCcccccceeeecccccCCc
Confidence 8999999999999987775444 7777887775544333
No 68
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.64 E-value=9.7e-08 Score=99.85 Aligned_cols=105 Identities=12% Similarity=0.160 Sum_probs=70.5
Q ss_pred CceEEEEccCCCCCCc---hhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHH-HHHHHHHHHHHHHhcCCCC
Q psy545 110 KKTKFIIHGFIDTPLS---SWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLV-GLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~---~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~V-g~~la~~I~~L~~~~g~~~ 185 (531)
+++++++||+..+... .....++..|.+ .||+|+++||++++.+. ...+.... ..++...++.+.+.. +.
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~-~G~~V~~~D~~g~g~s~---~~~~~~d~~~~~~~~~v~~l~~~~--~~ 135 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLE-RGQDVYLIDWGYPDRAD---RYLTLDDYINGYIDKCVDYICRTS--KL 135 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHH-CCCeEEEEeCCCCCHHH---hcCCHHHHHHHHHHHHHHHHHHHh--CC
Confidence 4569999998654310 001345666654 58999999999876432 11223333 344777788877654 45
Q ss_pred CcEEEEEechhhhhhhhhhhccC-CcceeeecCCCC
Q psy545 186 ADVHMIGHSLGAHTAGYAGQAIE-GLGRITGLDPAE 220 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~ag~~~~-~V~RItgLDPAg 220 (531)
+++++|||||||.++..++...+ .|.+++.+.|..
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~ 171 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPV 171 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCchheeeEEEecccc
Confidence 79999999999999986555444 499999987653
No 69
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=98.64 E-value=4.1e-07 Score=81.70 Aligned_cols=91 Identities=21% Similarity=0.333 Sum_probs=73.0
Q ss_pred ceeEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCcc
Q psy545 379 HHYRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVL 458 (531)
Q Consensus 379 ~~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~ 458 (531)
+.|+|+|.+.+...+ -+.+.+.|+|+|++|++..+.|.......++.|++.+|++..+.|||+|.+|+| |..+ +.+
T Consensus 1 ~~Y~v~v~Tg~~~gA--GT~a~V~i~L~G~~g~s~~~~L~~~~~~~F~rG~~~~f~i~~~~dlG~l~~i~l-~hd~-~g~ 76 (120)
T cd01752 1 YLYLVTVFTGWRRGA--GTTAKVTITLYGAEGESEPHHLRDPEKPIFERGSVDSFLLTTPFPLGELQSIRL-WHDN-SGL 76 (120)
T ss_pred CEEEEEEEECCCCCC--CcccEEEEEEEeCCCCcccEEcCCCCccceeCCCeeEEEecCccCCCCccEEEE-EECC-CCC
Confidence 469999999876543 367899999999999999988864333579999999999999999999999999 5544 222
Q ss_pred CCceecccccCCcEEEEEEEEeecc
Q psy545 459 QPRSLCFLWCNDHLYVSSIKVTETK 483 (531)
Q Consensus 459 ~p~~w~~~w~~~~~~i~~i~v~~~e 483 (531)
.| ..++++|+|+.++
T Consensus 77 ~~----------~W~l~~V~V~~~~ 91 (120)
T cd01752 77 SP----------SWYLSRVIVRDLQ 91 (120)
T ss_pred CC----------CeEEEEEEEEECC
Confidence 22 4479999999885
No 70
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.64 E-value=9.6e-08 Score=99.65 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=65.3
Q ss_pred CCceEEEEccCCCCCCchhH------------------------HHHHHHHhcCCCeEEEEEeCCCCCCCchh---h-hc
Q psy545 109 KKKTKFIIHGFIDTPLSSWV------------------------KEMRRELLKHSDWNVIVVDWAGGSLPLYT---Q-AT 160 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~------------------------~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~---~-a~ 160 (531)
.+.+|+|+||+.+.....++ ..+++.|.+ .|+.|+++|++|+|.+... . ..
T Consensus 20 ~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~-~G~~V~~~D~rGHG~S~~~~~~~g~~ 98 (332)
T TIGR01607 20 AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK-NGYSVYGLDLQGHGESDGLQNLRGHI 98 (332)
T ss_pred CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH-CCCcEEEecccccCCCccccccccch
Confidence 35689999999987642222 234555544 5999999999999864321 1 12
Q ss_pred ccHHHHHHHHHHHHHHHHHhc-----------------CCC-CCcEEEEEechhhhhhhhhhh
Q psy545 161 ANTRLVGLELAYFVNYLKDNY-----------------GLN-PADVHMIGHSLGAHTAGYAGQ 205 (531)
Q Consensus 161 ~n~r~Vg~~la~~I~~L~~~~-----------------g~~-~~~vhLIGHSLGAhVAg~ag~ 205 (531)
.+...+.+++..+++.+.+.. ..+ ...+.|+||||||.|+..++.
T Consensus 99 ~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 99 NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 466777788888888764310 012 346999999999999986543
No 71
>PLN02872 triacylglycerol lipase
Probab=98.64 E-value=3.6e-08 Score=105.64 Aligned_cols=110 Identities=15% Similarity=0.198 Sum_probs=76.5
Q ss_pred CCCceEEEEccCCCCCCchhH-----HHHHHHHhcCCCeEEEEEeCCCCCC----Cchhhh-----cccHHHHH-HHHHH
Q psy545 108 PKKKTKFIIHGFIDTPLSSWV-----KEMRRELLKHSDWNVIVVDWAGGSL----PLYTQA-----TANTRLVG-LELAY 172 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~-----~~l~~aLL~~~d~NVI~VDw~g~~~----~~Y~~a-----~~n~r~Vg-~~la~ 172 (531)
..+|+|+++||+.++.. .|. ..+... |...||.|+++|+||.+. ..+... .......| .++..
T Consensus 72 ~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~-La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a 149 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFI-LADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAE 149 (395)
T ss_pred CCCCeEEEeCccccccc-ceeecCcccchHHH-HHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHH
Confidence 34789999999988763 553 223333 444699999999998642 111111 23455666 79999
Q ss_pred HHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC---CcceeeecCCCCCc
Q psy545 173 FVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE---GLGRITGLDPAEPY 222 (531)
Q Consensus 173 ~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~---~V~RItgLDPAgP~ 222 (531)
+|+++.+. ..+++++|||||||.++..+..+.. .|..+++|.|+..+
T Consensus 150 ~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 150 MIHYVYSI---TNSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred HHHHHHhc---cCCceEEEEECHHHHHHHHHhhChHHHHHHHHHHHhcchhhh
Confidence 99998643 3479999999999999875554432 28888899998654
No 72
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.63 E-value=1.5e-07 Score=93.89 Aligned_cols=110 Identities=19% Similarity=0.272 Sum_probs=79.3
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHH--HHhcCCCeEEEEEeCCCCCC-CchhhhcccHHHHHHHHHHHHHHHHHhcCCC
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRR--ELLKHSDWNVIVVDWAGGSL-PLYTQATANTRLVGLELAYFVNYLKDNYGLN 184 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~--aLL~~~d~NVI~VDw~g~~~-~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~ 184 (531)
+.+..+|+||||..+.. ..+..+++ ..+.. ...||++.|+..+. ..|..+..+....+..++++|+.|.+. ..
T Consensus 16 ~~~~vlvfVHGyn~~f~-~a~~r~aql~~~~~~-~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~--~~ 91 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFE-DALRRAAQLAHDLGF-PGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA--PG 91 (233)
T ss_pred CCCeEEEEEeCCCCCHH-HHHHHHHHHHHHhCC-CceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc--cC
Confidence 57889999999988753 22333221 12222 23899999998775 468777778888899999999999754 24
Q ss_pred CCcEEEEEechhhhhhhhhhhccC----------CcceeeecCCCCC
Q psy545 185 PADVHMIGHSLGAHTAGYAGQAIE----------GLGRITGLDPAEP 221 (531)
Q Consensus 185 ~~~vhLIGHSLGAhVAg~ag~~~~----------~V~RItgLDPAgP 221 (531)
..+||||+||||+.|...+-+.+. .++.|+.+.|.-+
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 789999999999999876544321 2677777777644
No 73
>PRK10162 acetyl esterase; Provisional
Probab=98.57 E-value=2.2e-07 Score=96.33 Aligned_cols=101 Identities=24% Similarity=0.313 Sum_probs=66.2
Q ss_pred CceEEEEcc--CC-CCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHH---HHhcCC
Q psy545 110 KKTKFIIHG--FI-DTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYL---KDNYGL 183 (531)
Q Consensus 110 ~ptvviIHG--w~-~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L---~~~~g~ 183 (531)
.|++|++|| |. ++. ..|. .+...|....++.||+|||+......|+.+.. ++...++++ .+.+|+
T Consensus 81 ~p~vv~~HGGg~~~g~~-~~~~-~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~-------D~~~a~~~l~~~~~~~~~ 151 (318)
T PRK10162 81 QATLFYLHGGGFILGNL-DTHD-RIMRLLASYSGCTVIGIDYTLSPEARFPQAIE-------EIVAVCCYFHQHAEDYGI 151 (318)
T ss_pred CCEEEEEeCCcccCCCc-hhhh-HHHHHHHHHcCCEEEEecCCCCCCCCCCCcHH-------HHHHHHHHHHHhHHHhCC
Confidence 589999999 43 443 3443 34455555468999999999766556665432 222223333 234678
Q ss_pred CCCcEEEEEechhhhhhhhhhhccC-------CcceeeecCCC
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQAIE-------GLGRITGLDPA 219 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~~~-------~V~RItgLDPA 219 (531)
+.++|.|+|||+||++|..++..+. .+..++.+.|.
T Consensus 152 d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 152 NMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred ChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 8999999999999999987665431 25555555554
No 74
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.56 E-value=9.8e-08 Score=91.60 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=64.4
Q ss_pred EEEEcc--CCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHh---cCCCCCc
Q psy545 113 KFIIHG--FIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDN---YGLNPAD 187 (531)
Q Consensus 113 vviIHG--w~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~---~g~~~~~ 187 (531)
||+||| |.... ..+...+...+.+..|+.|+++|++-.....|+... +++...++++.+. ++++.++
T Consensus 1 v~~~HGGg~~~g~-~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~-------~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGS-KESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAAL-------EDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCG-TTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHH-------HHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCC-hHHHHHHHHHHHhhccEEEEEeeccccccccccccc-------cccccceeeeccccccccccccc
Confidence 689999 65332 233345566666546899999999977655555433 3555555555543 6788999
Q ss_pred EEEEEechhhhhhhhhhhccC-----CcceeeecCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIE-----GLGRITGLDPA 219 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~-----~V~RItgLDPA 219 (531)
|+|+|+|.|||+|..++.... .+..++.+.|.
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 999999999999997765432 27778888773
No 75
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=98.55 E-value=1e-06 Score=76.62 Aligned_cols=86 Identities=20% Similarity=0.233 Sum_probs=66.7
Q ss_pred ceeEEEEEEcCCCCCccceeeeEEEEEEeCCCc---eeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecC
Q psy545 379 HHYRITLDLARPPRAETWVQGFMRVSLHSDNGV---IRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDM 455 (531)
Q Consensus 379 ~~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~---~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~ 455 (531)
++|+|+|++.....+ -+.+.+.|+|+|++|. +....+. . ..+++|.++++++..+.|+|+|.+|++.|+..
T Consensus 1 ~~Y~v~V~Tg~~~~a--GT~~~V~l~L~g~~~~s~~~~~~~~~-~--~~f~~g~~~~f~v~~~~~lG~l~~v~v~~d~~- 74 (105)
T smart00308 1 GKYKVTVTTGGLDFA--GTTASVSLSLVGAEGDGKESKLDYLF-K--GIFARGSTYEFTFDVDEDFGELGAVKIKNEHR- 74 (105)
T ss_pred CEEEEEEEECCccCC--CccceEEEEEEeCCCCCcceeccccC-C--ccccCCceEEEEEecccCCCCcEEEEEEeCCC-
Confidence 589999999875432 2446899999999954 4444443 1 23889999999999999999999999988743
Q ss_pred CccCCceecccccCCcEEEEEEEEeecc
Q psy545 456 DVLQPRSLCFLWCNDHLYVSSIKVTETK 483 (531)
Q Consensus 456 ~~~~p~~w~~~w~~~~~~i~~i~v~~~e 483 (531)
.|..++++|+|+.++
T Consensus 75 -------------~~~w~l~~V~V~~~~ 89 (105)
T smart00308 75 -------------HPEWFLKSITVKDLP 89 (105)
T ss_pred -------------CCCeEEEEEEEEECC
Confidence 236689999999884
No 76
>PRK11460 putative hydrolase; Provisional
Probab=98.54 E-value=4.9e-07 Score=89.66 Aligned_cols=109 Identities=22% Similarity=0.288 Sum_probs=68.9
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCC-------CCCchhh-------hcccHHHHHHHHHH
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGG-------SLPLYTQ-------ATANTRLVGLELAY 172 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~-------~~~~Y~~-------a~~n~r~Vg~~la~ 172 (531)
.+.+|++|++||++++.. .|. .+.+.|.. ...++.+++.++. +..+|.. ....+......+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~-~~~-~l~~~l~~-~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPV-AMG-EIGSWFAP-AFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCCcEEEEEeCCCCChH-HHH-HHHHHHHH-HCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 556789999999999984 554 45555543 2334444444432 1122211 01122333345556
Q ss_pred HHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCC
Q psy545 173 FVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDP 218 (531)
Q Consensus 173 ~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDP 218 (531)
+++++.++.+++.++|+|+|||+||.+|..++...+. ++.++++.+
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg 136 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSG 136 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecc
Confidence 6777777778888999999999999999977655555 677776644
No 77
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.52 E-value=1.5e-06 Score=76.99 Aligned_cols=90 Identities=22% Similarity=0.328 Sum_probs=73.0
Q ss_pred ceeEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCcc
Q psy545 379 HHYRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVL 458 (531)
Q Consensus 379 ~~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~ 458 (531)
++|+|+|++.+...+ -+.+.+.|+|+|++|++..+.+.... ..+++|++++|.|..+.++|+|.+|.|.|+.. ..
T Consensus 1 ~~Y~v~V~Tg~~~~a--gT~~~v~i~l~g~~g~s~~~~l~~~~-~~f~~g~~~~f~v~~~~~lG~i~~v~l~~d~~--g~ 75 (116)
T cd00113 1 CRYTVTIKTGDKKGA--GTDSNISLALYGENGNSSDIPILDGP-GSFERGSTDTFQIDLKLDIGDITKVYLRRDGS--GL 75 (116)
T ss_pred CEEEEEEEECCCCCC--CccCEEEEEEEeCCCCcccEEccCCC-CcccCCCceEEEEeccCCCcCeEEEEEEECCC--CC
Confidence 479999999886533 36789999999999999988886322 23899999999999999999999999988754 11
Q ss_pred CCceecccccCCcEEEEEEEEeecc
Q psy545 459 QPRSLCFLWCNDHLYVSSIKVTETK 483 (531)
Q Consensus 459 ~p~~w~~~w~~~~~~i~~i~v~~~e 483 (531)
. |..++++|+|+.++
T Consensus 76 ~----------~~W~l~~V~V~~~~ 90 (116)
T cd00113 76 S----------DGWYCESITVQALG 90 (116)
T ss_pred C----------CCEEEeEEEEEeCC
Confidence 2 35579999999884
No 78
>PLN02442 S-formylglutathione hydrolase
Probab=98.50 E-value=5.1e-07 Score=92.18 Aligned_cols=109 Identities=18% Similarity=0.207 Sum_probs=67.7
Q ss_pred CCCceEEEEccCCCCCCchhHHHH-HHHHhcCCCeEEEEEeCCCCCC---------------Cchhhhc------cc-HH
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEM-RRELLKHSDWNVIVVDWAGGSL---------------PLYTQAT------AN-TR 164 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l-~~aLL~~~d~NVI~VDw~g~~~---------------~~Y~~a~------~n-~r 164 (531)
...|+++++|||.++.. .|.... ...++...++.||++|..+++. ..|..+. .. ..
T Consensus 45 ~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 46799999999998873 564311 1245556699999999864330 1121111 01 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 165 LVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 165 ~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
.+.+++...|+...+ .++.++++|+||||||++|..++...+. +..++.+.|+
T Consensus 124 ~~~~~l~~~i~~~~~--~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 124 YVVKELPKLLSDNFD--QLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred hHHHHHHHHHHHHHH--hcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 223334334433322 2478999999999999999876655554 7777777765
No 79
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.48 E-value=3.9e-07 Score=86.54 Aligned_cols=73 Identities=18% Similarity=0.240 Sum_probs=53.3
Q ss_pred eEEEEEeCCCCCCCc----hhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC-Ccceeee
Q psy545 141 WNVIVVDWAGGSLPL----YTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE-GLGRITG 215 (531)
Q Consensus 141 ~NVI~VDw~g~~~~~----Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~-~V~RItg 215 (531)
|.||++||+|.+.+. .......+..+++++..+++.+ ..+++++|||||||.++..++...+ .|.+|+.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL------GIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH------TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 689999999988754 2334455555555555555543 3566999999999999986555555 4999999
Q ss_pred cCCC
Q psy545 216 LDPA 219 (531)
Q Consensus 216 LDPA 219 (531)
+.|+
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 8876
No 80
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.45 E-value=1.3e-06 Score=84.76 Aligned_cols=103 Identities=16% Similarity=0.167 Sum_probs=73.0
Q ss_pred ceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEE
Q psy545 111 KTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHM 190 (531)
Q Consensus 111 ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhL 190 (531)
+++|++|+-.++. .....+++.|-.. .++|+.+++++.... .....++..++...++.|.... +-..++|
T Consensus 1 ~~lf~~p~~gG~~--~~y~~la~~l~~~-~~~v~~i~~~~~~~~--~~~~~si~~la~~y~~~I~~~~-----~~gp~~L 70 (229)
T PF00975_consen 1 RPLFCFPPAGGSA--SSYRPLARALPDD-VIGVYGIEYPGRGDD--EPPPDSIEELASRYAEAIRARQ-----PEGPYVL 70 (229)
T ss_dssp -EEEEESSTTCSG--GGGHHHHHHHTTT-EEEEEEECSTTSCTT--SHEESSHHHHHHHHHHHHHHHT-----SSSSEEE
T ss_pred CeEEEEcCCccCH--HHHHHHHHhCCCC-eEEEEEEecCCCCCC--CCCCCCHHHHHHHHHHHhhhhC-----CCCCeee
Confidence 4799999999876 3356777766321 399999999987632 1223456665555554444331 2349999
Q ss_pred EEechhhhhhhhhhhccC--C--cceeeecCCCCCcc
Q psy545 191 IGHSLGAHTAGYAGQAIE--G--LGRITGLDPAEPYF 223 (531)
Q Consensus 191 IGHSLGAhVAg~ag~~~~--~--V~RItgLDPAgP~F 223 (531)
+|||+||.||..+++.+. | +.+|+.+|...|..
T Consensus 71 ~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~ 107 (229)
T PF00975_consen 71 AGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSI 107 (229)
T ss_dssp EEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTC
T ss_pred hccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCc
Confidence 999999999999888774 3 99999999877765
No 81
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.41 E-value=1.1e-06 Score=100.91 Aligned_cols=95 Identities=18% Similarity=0.118 Sum_probs=68.8
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchh-----------------------hhcccHHH
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYT-----------------------QATANTRL 165 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~-----------------------~a~~n~r~ 165 (531)
..|++|++|||.++.. .|. .+...|.+ .+|.||++|+++||.+.+. .+..|.+.
T Consensus 448 g~P~VVllHG~~g~~~-~~~-~lA~~La~-~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ 524 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-NAL-AFAGTLAA-AGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQ 524 (792)
T ss_pred CCcEEEEeCCCCCCHH-HHH-HHHHHHHh-CCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHH
Confidence 4579999999999873 564 45665543 5899999999999865221 12347888
Q ss_pred HHHHHHHHHHHHH------Hh----cCCCCCcEEEEEechhhhhhhhhhhc
Q psy545 166 VGLELAYFVNYLK------DN----YGLNPADVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 166 Vg~~la~~I~~L~------~~----~g~~~~~vhLIGHSLGAhVAg~ag~~ 206 (531)
...++..+...|. .. ..++..+|+++||||||.++..+...
T Consensus 525 ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 525 SILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 8888888877774 11 12456899999999999998754443
No 82
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.36 E-value=1.1e-06 Score=97.93 Aligned_cols=113 Identities=12% Similarity=0.003 Sum_probs=76.2
Q ss_pred CCceEEEEccCCCCCC--chhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 109 KKKTKFIIHGFIDTPL--SSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~--~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
..|+||++|||..+.. ..+.......|+ ..||.|+++|.+|++.+.-...... ...++++..+|++|.++ .....
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~-~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~D~~~~i~~l~~q-~~~~~ 97 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFV-AQGYAVVIQDTRGRGASEGEFDLLG-SDEAADGYDLVDWIAKQ-PWCDG 97 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHH-hCCcEEEEEeccccccCCCceEecC-cccchHHHHHHHHHHhC-CCCCC
Confidence 5789999999987542 112222233344 4699999999999876421111111 33567889999998754 23447
Q ss_pred cEEEEEechhhhhhhhhhhcc-CCcceeeecCCCCCccC
Q psy545 187 DVHMIGHSLGAHTAGYAGQAI-EGLGRITGLDPAEPYFQ 224 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~-~~V~RItgLDPAgP~F~ 224 (531)
+|.++|||+||.+|..++... +.|..|+...+...++.
T Consensus 98 ~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 98 NVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred cEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 999999999999998766554 45888887776655443
No 83
>KOG1838|consensus
Probab=98.34 E-value=2.2e-06 Score=91.25 Aligned_cols=105 Identities=20% Similarity=0.306 Sum_probs=77.8
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCc----hhhhcccHHHHHHHHHHHHHHHHHhcC
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPL----YTQATANTRLVGLELAYFVNYLKDNYG 182 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~----Y~~a~~n~r~Vg~~la~~I~~L~~~~g 182 (531)
..+.|++||+||.+++..+.++..++..+.+ .||+|++++-||.+... -...+.++ .+++.+++++.+.
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~-~G~r~VVfN~RG~~g~~LtTpr~f~ag~t----~Dl~~~v~~i~~~-- 194 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQR-KGYRVVVFNHRGLGGSKLTTPRLFTAGWT----EDLREVVNHIKKR-- 194 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHh-CCcEEEEECCCCCCCCccCCCceeecCCH----HHHHHHHHHHHHh--
Confidence 3577999999999998888999999876654 58999999999976422 11123344 4777778888654
Q ss_pred CCCCcEEEEEechhhhhhh-hhhhccCC---cceeeecCC
Q psy545 183 LNPADVHMIGHSLGAHTAG-YAGQAIEG---LGRITGLDP 218 (531)
Q Consensus 183 ~~~~~vhLIGHSLGAhVAg-~ag~~~~~---V~RItgLDP 218 (531)
++..++..+|+||||.+.. |+|+.-.. ++.++...|
T Consensus 195 ~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~P 234 (409)
T KOG1838|consen 195 YPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNP 234 (409)
T ss_pred CCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEecc
Confidence 4778999999999999876 78876543 444444434
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.32 E-value=3.2e-06 Score=82.54 Aligned_cols=114 Identities=18% Similarity=0.227 Sum_probs=69.3
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCC------CCC---Cchhh---------hcccHHHHHH
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAG------GSL---PLYTQ---------ATANTRLVGL 168 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g------~~~---~~Y~~---------a~~n~r~Vg~ 168 (531)
++..|++|++||++++. ..|. .+....+...+..+|.+.-+. .+. .+|.. ....+....+
T Consensus 11 ~~~~~lvi~LHG~G~~~-~~~~-~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSE-DLFA-LLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp ST-SEEEEEE--TTS-H-HHHH-HHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCceEEEEECCCCCCc-chhH-HHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 56788999999999887 3443 333322334678888876531 122 22321 1234555666
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCCCcc
Q psy545 169 ELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEPYF 223 (531)
Q Consensus 169 ~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP~F 223 (531)
.|.++|+.+.+ .+++.++|+|+|+|.||.+|..++...+. ++++++|-..-|..
T Consensus 89 ~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 89 RLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG
T ss_pred HHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc
Confidence 77788877654 57899999999999999999998887766 99999997665543
No 85
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.30 E-value=2.1e-06 Score=95.21 Aligned_cols=105 Identities=12% Similarity=0.170 Sum_probs=68.6
Q ss_pred CCceEEEEccCCCCCCchh----HHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCC
Q psy545 109 KKKTKFIIHGFIDTPLSSW----VKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLN 184 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w----~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~ 184 (531)
.+++++|||||..... .| -..++..|++ .|+.|+++||++++...-... -...+...+...|+.+.+.. .
T Consensus 187 ~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~-qGf~V~~iDwrgpg~s~~~~~--~ddY~~~~i~~al~~v~~~~--g 260 (532)
T TIGR01838 187 HKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVE-QGHTVFVISWRNPDASQADKT--FDDYIRDGVIAALEVVEAIT--G 260 (532)
T ss_pred CCCcEEEECcccccce-eeecccchHHHHHHHH-CCcEEEEEECCCCCcccccCC--hhhhHHHHHHHHHHHHHHhc--C
Confidence 4678999999976542 11 1246666665 589999999999764321100 01223345666677766544 4
Q ss_pred CCcEEEEEechhhhhhh-----hhhhccCC-cceeeecCCC
Q psy545 185 PADVHMIGHSLGAHTAG-----YAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 185 ~~~vhLIGHSLGAhVAg-----~ag~~~~~-V~RItgLDPA 219 (531)
.+++|++||||||.++. +++...+. |..+|.+...
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~ 301 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTL 301 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecC
Confidence 68999999999999852 34444343 8888887654
No 86
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.29 E-value=2.3e-06 Score=101.58 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=61.8
Q ss_pred CCceEEEEccCCCCCCchhHHH----HHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCC
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKE----MRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLN 184 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~----l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~ 184 (531)
.++++||||||..+.. .|-.. ++..|.+ .|+.|+++||....... .....+.......+.+.++.+.+. .
T Consensus 66 ~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~-~g~~v~~~d~G~~~~~~-~~~~~~l~~~i~~l~~~l~~v~~~---~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHR-AGLDPWVIDFGSPDKVE-GGMERNLADHVVALSEAIDTVKDV---T 139 (994)
T ss_pred CCCcEEEECCCCCCcc-ceecCCcccHHHHHHH-CCCEEEEEcCCCCChhH-cCccCCHHHHHHHHHHHHHHHHHh---h
Confidence 5688999999988773 55322 3454544 58999999995322110 000112222222344444443222 2
Q ss_pred CCcEEEEEechhhhhhh-hhhhccCC-cceeeecC
Q psy545 185 PADVHMIGHSLGAHTAG-YAGQAIEG-LGRITGLD 217 (531)
Q Consensus 185 ~~~vhLIGHSLGAhVAg-~ag~~~~~-V~RItgLD 217 (531)
.+++||+||||||.+|. +++.+.+. |.+++.++
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~ 174 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFG 174 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEe
Confidence 46899999999999996 45545453 88888643
No 87
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.27 E-value=4.7e-06 Score=82.79 Aligned_cols=126 Identities=20% Similarity=0.231 Sum_probs=72.4
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHH-----hc--CCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRREL-----LK--HSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNY 181 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aL-----L~--~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~ 181 (531)
++.+||||||..++.. .| ..+...+ .. ...+.++.+|+.......+.. .....++.+++.|+.+.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~---~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QV-RSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGR---TLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHh-HH-HHHHHHHhhhhhhccCccceeEEEeccCccccccccc---cHHHHHHHHHHHHHHHHHhh
Confidence 5678999999888764 32 1232222 11 135889999997643221111 11222334444444443332
Q ss_pred ---CCCCCcEEEEEechhhhhhhhhhhccC---C-cceeeecCCCCCccCCCCCCCCCCccchhhhHHhh
Q psy545 182 ---GLNPADVHMIGHSLGAHTAGYAGQAIE---G-LGRITGLDPAEPYFQGMPPFARLDPTDADLVDVIH 244 (531)
Q Consensus 182 ---g~~~~~vhLIGHSLGAhVAg~ag~~~~---~-V~RItgLDPAgP~F~~~~~~~rLd~sDA~fVDvIH 244 (531)
.-+.++|.||||||||-||-.+....+ . |..|+.|. .|... +...+|..-..|-+.+.
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~--tPh~g---~~~~~d~~~~~~y~~~~ 142 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLG--TPHRG---SPLAFDRSLDRFYKRLN 142 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEc--CCCCC---ccccchHHHHHHHHHHH
Confidence 346899999999999999987655443 2 88888885 34321 12334444445555443
No 88
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.24 E-value=4.2e-06 Score=84.69 Aligned_cols=103 Identities=17% Similarity=0.267 Sum_probs=71.0
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHH----hc--
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKD----NY-- 181 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~----~~-- 181 (531)
.+-|.+||+|||.-. ..|...+.+++.+ -||-||.+|+..... ......+ +.++++|+||.+ ..
T Consensus 15 g~yPVv~f~~G~~~~--~s~Ys~ll~hvAS-hGyIVV~~d~~~~~~---~~~~~~~----~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLI--NSWYSQLLEHVAS-HGYIVVAPDLYSIGG---PDDTDEV----ASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CCcCEEEEeCCcCCC--HHHHHHHHHHHHh-CceEEEEecccccCC---CCcchhH----HHHHHHHHHHHhcchhhccc
Confidence 457899999999933 4677888888766 499999999665322 1111122 344455555543 22
Q ss_pred --CCCCCcEEEEEechhhhhhhhhhhcc-C-----CcceeeecCCCC
Q psy545 182 --GLNPADVHMIGHSLGAHTAGYAGQAI-E-----GLGRITGLDPAE 220 (531)
Q Consensus 182 --g~~~~~vhLIGHSLGAhVAg~ag~~~-~-----~V~RItgLDPAg 220 (531)
..+.+++.|.|||-||.+|..++... . .+..+++|||.-
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 24778999999999999997655443 1 388999999975
No 89
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.21 E-value=6.6e-06 Score=80.01 Aligned_cols=108 Identities=17% Similarity=0.246 Sum_probs=74.4
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC---Cchhhhccc--------HHHHHHHHHHHHHH
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL---PLYTQATAN--------TRLVGLELAYFVNY 176 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~---~~Y~~a~~n--------~r~Vg~~la~~I~~ 176 (531)
..+|.||+||++.+-. .++..+++.|.+ .||.|+++|+-.+.. ..+...... ...+.+++...+++
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~-~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~ 88 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAE-EGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDY 88 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHH-TT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHh-cCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 4678999999988754 678888888876 489999999866543 222221111 23556677777888
Q ss_pred HHHhcCCCCCcEEEEEechhhhhhhhhhhccCCcceeeecCC
Q psy545 177 LKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEGLGRITGLDP 218 (531)
Q Consensus 177 L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItgLDP 218 (531)
|.+....+.++|-+||+|+||.+|..++...+.+...+..-|
T Consensus 89 l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg 130 (218)
T PF01738_consen 89 LRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYG 130 (218)
T ss_dssp HHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-
T ss_pred HHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcC
Confidence 876544567999999999999999987776655777666666
No 90
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.19 E-value=5.5e-06 Score=85.16 Aligned_cols=109 Identities=16% Similarity=0.191 Sum_probs=71.6
Q ss_pred CCCCCceEEEEcc--CCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCC
Q psy545 106 FDPKKKTKFIIHG--FIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGL 183 (531)
Q Consensus 106 fn~~~ptvviIHG--w~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~ 183 (531)
-....|++|++|| |....... ...+...++...|+.|++|||+-.....|+.+..+ +-+.+..+.+.. .++|.
T Consensus 75 ~~~~~p~vly~HGGg~~~g~~~~-~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d---~~~a~~~l~~~~-~~~g~ 149 (312)
T COG0657 75 AAATAPVVLYLHGGGWVLGSLRT-HDALVARLAAAAGAVVVSVDYRLAPEHPFPAALED---AYAAYRWLRANA-AELGI 149 (312)
T ss_pred CCCCCcEEEEEeCCeeeecChhh-hHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHH---HHHHHHHHHhhh-HhhCC
Confidence 3456899999999 65433222 22344556666799999999998776677655432 333333333333 24688
Q ss_pred CCCcEEEEEechhhhhhhhhhhccC-----CcceeeecCCC
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQAIE-----GLGRITGLDPA 219 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~~~-----~V~RItgLDPA 219 (531)
++++|.|.|+|.|||+|..++.... .....+++-|.
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 9999999999999999987665543 13444454443
No 91
>COG0400 Predicted esterase [General function prediction only]
Probab=98.16 E-value=7e-06 Score=80.70 Aligned_cols=115 Identities=22% Similarity=0.326 Sum_probs=78.4
Q ss_pred cCCCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEe----CCCCCC--Cchhhhccc---HHHHHHHHHHHH
Q psy545 104 SNFDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVD----WAGGSL--PLYTQATAN---TRLVGLELAYFV 174 (531)
Q Consensus 104 s~fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VD----w~g~~~--~~Y~~a~~n---~r~Vg~~la~~I 174 (531)
+.-++..|++|++||++++.. +.+. +...+ ..++.++.+- +.++.. ..|.....+ ...-...++++|
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~-~~~~-~~~~~--~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDEL-DLVP-LPELI--LPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCCCCcEEEEEecCCCChh-hhhh-hhhhc--CCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 344677889999999998773 3343 22222 2466766653 222211 122222233 333345666677
Q ss_pred HHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCCCc
Q psy545 175 NYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEPY 222 (531)
Q Consensus 175 ~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP~ 222 (531)
..+.+++|++.+++.++|||-||.||.+++...++ +.+++++-|.-|.
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~ 136 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPL 136 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCC
Confidence 77777899999999999999999999999988887 8999999887665
No 92
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.15 E-value=9.3e-06 Score=77.42 Aligned_cols=90 Identities=24% Similarity=0.392 Sum_probs=57.3
Q ss_pred EEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEE
Q psy545 113 KFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIG 192 (531)
Q Consensus 113 vviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIG 192 (531)
++|||||.++....|..-+...|-.. +.|-..||. .+ ++.+.+..|.+......+++.|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~--~~V~~~~~~---~P--------------~~~~W~~~l~~~i~~~~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS--VRVEQPDWD---NP--------------DLDEWVQALDQAIDAIDEPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS--EEEEEC--T---S----------------HHHHHHHHHHCCHC-TTTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC--eEEeccccC---CC--------------CHHHHHHHHHHHHhhcCCCeEEEE
Confidence 68999999999889998888877443 888888882 11 222334444443333456799999
Q ss_pred echhhhhhhh-hhhccCC-cceeeecCCCCC
Q psy545 193 HSLGAHTAGY-AGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 193 HSLGAhVAg~-ag~~~~~-V~RItgLDPAgP 221 (531)
||||+..+.. ++..... |+++..+.|.-+
T Consensus 62 HSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred eCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 9999998874 4344443 999888877654
No 93
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.11 E-value=1.2e-05 Score=86.17 Aligned_cols=104 Identities=17% Similarity=0.135 Sum_probs=69.1
Q ss_pred CceEEEEccCCCCCC-----------chhHHHHHHH--HhcCCCeEEEEEeCCCCCC--Cc-----------------hh
Q psy545 110 KKTKFIIHGFIDTPL-----------SSWVKEMRRE--LLKHSDWNVIVVDWAGGSL--PL-----------------YT 157 (531)
Q Consensus 110 ~ptvviIHGw~~s~~-----------~~w~~~l~~a--LL~~~d~NVI~VDw~g~~~--~~-----------------Y~ 157 (531)
.+.||+.|+++++.. ..|...++-. .++-..|-||++|..|.+. ++ |.
T Consensus 56 ~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~ 135 (389)
T PRK06765 56 SNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYG 135 (389)
T ss_pred CCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccC
Confidence 468899999998541 2455544321 2344569999999987532 11 11
Q ss_pred --hhcccHHHHHHHHHHHHHHHHHhcCCCCCcEE-EEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 158 --QATANTRLVGLELAYFVNYLKDNYGLNPADVH-MIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 158 --~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vh-LIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
-....++..++.+..+++.| ..++++ ||||||||.+|...+...+. |.+|+.+..+
T Consensus 136 ~~fP~~t~~d~~~~~~~ll~~l------gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 136 MDFPVVTILDFVRVQKELIKSL------GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred CCCCcCcHHHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 11245666666666665543 468887 99999999999976666565 9999998654
No 94
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=98.08 E-value=3.7e-05 Score=68.54 Aligned_cols=88 Identities=22% Similarity=0.306 Sum_probs=70.3
Q ss_pred eeEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCccC
Q psy545 380 HYRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVLQ 459 (531)
Q Consensus 380 ~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~~ 459 (531)
+|+|+|.+.....+. +.+.+.|+|+|+.|++..+.|.... ..++.|.+.+|++..+.|+|+|.+|++.++.. ..+
T Consensus 2 ~Y~V~V~Tg~~~~AG--T~a~V~i~l~G~~g~S~~~~L~~~~-~~FerG~~d~F~v~~~~~lG~l~~i~i~~d~~--g~~ 76 (113)
T cd01753 2 EYKVTVATGSSLFAG--TDDYIYLTLVGTAGESEKQLLDRPG-YDFERGAVDEYKVKVPEDLGELLLVRLRKRKY--LLF 76 (113)
T ss_pred EEEEEEEECCCcCCc--cccEEEEEEEECCCcccCEEcCCCC-CccCCCCeeEEEEecccCCCCcEEEEEEECCC--CCC
Confidence 699999998755443 6789999999999999999887443 24899999999999999999999999977753 222
Q ss_pred CceecccccCCcEEEEEEEEeec
Q psy545 460 PRSLCFLWCNDHLYVSSIKVTET 482 (531)
Q Consensus 460 p~~w~~~w~~~~~~i~~i~v~~~ 482 (531)
| .-++++|.|+..
T Consensus 77 ~----------~W~l~~V~V~~~ 89 (113)
T cd01753 77 D----------AWFCNYITVTGP 89 (113)
T ss_pred C----------CeeecEEEEEcC
Confidence 2 225889999865
No 95
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.07 E-value=9.3e-06 Score=81.79 Aligned_cols=105 Identities=18% Similarity=0.196 Sum_probs=71.1
Q ss_pred CCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHh-----
Q psy545 106 FDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDN----- 180 (531)
Q Consensus 106 fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~----- 180 (531)
-...-|.++|+|||.-.. .|..++...+.+ .||-||+++......+.-... .+..|+.++||.+.
T Consensus 42 ~~G~yPVilF~HG~~l~n--s~Ys~lL~HIAS-HGfIVVAPQl~~~~~p~~~~E-------i~~aa~V~~WL~~gL~~~L 111 (307)
T PF07224_consen 42 EAGTYPVILFLHGFNLYN--SFYSQLLAHIAS-HGFIVVAPQLYTLFPPDGQDE-------IKSAASVINWLPEGLQHVL 111 (307)
T ss_pred cCCCccEEEEeechhhhh--HHHHHHHHHHhh-cCeEEEechhhcccCCCchHH-------HHHHHHHHHHHHhhhhhhC
Confidence 355678999999997653 566777776655 589999999876433211111 13444445555432
Q ss_pred ---cCCCCCcEEEEEechhhhhhhhhhhcc-CC--cceeeecCCCC
Q psy545 181 ---YGLNPADVHMIGHSLGAHTAGYAGQAI-EG--LGRITGLDPAE 220 (531)
Q Consensus 181 ---~g~~~~~vhLIGHSLGAhVAg~ag~~~-~~--V~RItgLDPAg 220 (531)
-..+++++.|+|||-||..|-.++... .. +..++||||..
T Consensus 112 p~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 112 PENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred CCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 124789999999999999987544333 22 89999999964
No 96
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=98.05 E-value=5.3e-05 Score=67.99 Aligned_cols=89 Identities=19% Similarity=0.324 Sum_probs=70.6
Q ss_pred eeEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCCC-CcccccCCceEEEEEeccCCCCceeEEEEEEEecCCcc
Q psy545 380 HYRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPN-GYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVL 458 (531)
Q Consensus 380 ~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~-~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~ 458 (531)
.|+|.|.+.....+ -+.+.+.|+|+|++|++..+.|... ....++.|.+.+|.+.. .|+|+|++|.+.++.. -.
T Consensus 2 ~Y~v~v~TG~~~~A--GT~a~V~i~L~G~~g~s~~~~L~~~~~~~~FerGs~d~F~i~~-~~lG~l~~i~i~~d~~--g~ 76 (120)
T cd01756 2 TYEVTVKTGDVKGA--GTDANVFITLYGENGDTGKRKLKKSNNKNKFERGQTDKFTVEA-VDLGKLKKIRIGHDNS--GL 76 (120)
T ss_pred EEEEEEEECCCcCC--CCCcEEEEEEEeCCCccccEEccCCCcCCcccCCCeEEEEEEe-cCCCCeEEEEEEECCC--CC
Confidence 48999998875443 3568999999999999999988742 23578999999999999 6999999999977743 11
Q ss_pred CCceecccccCCcEEEEEEEEeecc
Q psy545 459 QPRSLCFLWCNDHLYVSSIKVTETK 483 (531)
Q Consensus 459 ~p~~w~~~w~~~~~~i~~i~v~~~e 483 (531)
.| .-++++|.|+.++
T Consensus 77 ~~----------~W~~~~V~V~~~~ 91 (120)
T cd01756 77 GA----------GWFLDKVEIREPG 91 (120)
T ss_pred CC----------CcEEeEEEEEECC
Confidence 22 3369999999884
No 97
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.03 E-value=5.5e-05 Score=66.04 Aligned_cols=95 Identities=21% Similarity=0.371 Sum_probs=70.3
Q ss_pred eEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCccCC
Q psy545 381 YRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVLQP 460 (531)
Q Consensus 381 y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~~p 460 (531)
|+|+|.+.+...+ -+...+.|+|+|.+|.+..+.+..... ...|++.+|.+..+.|+|+|.+|.|.|+.. .
T Consensus 1 Y~v~v~Tg~~~~a--GT~~~V~i~l~G~~g~s~~~~l~~~~~--~~~g~~d~F~i~~~~~lG~i~~i~i~~~~~--~--- 71 (113)
T PF01477_consen 1 YRVTVKTGDERGA--GTDANVYITLYGSKGKSGEIELLDPSG--FNFGSTDTFTIETPEDLGEIQKIRIWHDGS--G--- 71 (113)
T ss_dssp EEEEEEEESSTEE--EESSEEEEEEEETTEEEEEEEEEEEEE--TSTTEEEEEEEEESSCGCSEEEEEEEEESS--S---
T ss_pred CEEEEEECCCCCC--CcCCeEEEEEEECCCCcceEEEeeeee--cccCceEEeeeeecccCCCCcEEEEEEccC--C---
Confidence 8999998764322 245679999999999999888752221 111999999999988999999999999832 1
Q ss_pred ceecccccCCcEEEEEEEEeeccccccccccceeec
Q psy545 461 RSLCFLWCNDHLYVSSIKVTETKDIMARDKRAIETN 496 (531)
Q Consensus 461 ~~w~~~w~~~~~~i~~i~v~~~e~~~~~~~~~~~~~ 496 (531)
..+..++++|.|+.++ +++...|.
T Consensus 72 -------~~~~W~l~~V~V~~~~-----~~~~~~F~ 95 (113)
T PF01477_consen 72 -------PSPSWYLDSVVVTDGE-----TGRTYTFP 95 (113)
T ss_dssp -------SSSEEEEEEEEEEETT-----TSEEEEEE
T ss_pred -------CccceEEEEEEEEeCC-----CCcEEEEE
Confidence 1336689999999974 44555553
No 98
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.03 E-value=9e-06 Score=78.56 Aligned_cols=86 Identities=19% Similarity=0.267 Sum_probs=59.2
Q ss_pred HHhcCCCeEEEEEeCCCCCCC--chhhh-cccH-HHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC
Q psy545 134 ELLKHSDWNVIVVDWAGGSLP--LYTQA-TANT-RLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG 209 (531)
Q Consensus 134 aLL~~~d~NVI~VDw~g~~~~--~Y~~a-~~n~-r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~ 209 (531)
.+|...||.|+.+|++|.+.. .+..+ ..+. ....+++...+++|.+...+++++|.|+|||+|||+|..++.+.+.
T Consensus 8 ~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~ 87 (213)
T PF00326_consen 8 QLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPD 87 (213)
T ss_dssp HHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCC
T ss_pred HHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccce
Confidence 466567999999999987642 12221 1111 2335678888899987777899999999999999999987775554
Q ss_pred -cceeeecCCC
Q psy545 210 -LGRITGLDPA 219 (531)
Q Consensus 210 -V~RItgLDPA 219 (531)
...++...|.
T Consensus 88 ~f~a~v~~~g~ 98 (213)
T PF00326_consen 88 RFKAAVAGAGV 98 (213)
T ss_dssp GSSEEEEESE-
T ss_pred eeeeeecccee
Confidence 6666666554
No 99
>KOG1552|consensus
Probab=98.02 E-value=3.2e-05 Score=77.80 Aligned_cols=104 Identities=19% Similarity=0.252 Sum_probs=76.1
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
..+++++.||=..+.. -+..+...|-.+-++||+..|++|.|.+.-..+..|+. +++....++|.+.+| +.++|
T Consensus 59 ~~~~lly~hGNa~Dlg--q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y---~Di~avye~Lr~~~g-~~~~I 132 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLG--QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLY---ADIKAVYEWLRNRYG-SPERI 132 (258)
T ss_pred cceEEEEcCCcccchH--HHHHHHHHHhhcccceEEEEecccccccCCCcccccch---hhHHHHHHHHHhhcC-CCceE
Confidence 4689999999855542 12233333433458999999999988754444444553 577778899988888 89999
Q ss_pred EEEEechhhhhhhhhhhccCCcceeeecCCC
Q psy545 189 HMIGHSLGAHTAGYAGQAIEGLGRITGLDPA 219 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~~V~RItgLDPA 219 (531)
.|.|+|+|+..+...|.+.+ +..++...|-
T Consensus 133 il~G~SiGt~~tv~Lasr~~-~~alVL~SPf 162 (258)
T KOG1552|consen 133 ILYGQSIGTVPTVDLASRYP-LAAVVLHSPF 162 (258)
T ss_pred EEEEecCCchhhhhHhhcCC-cceEEEeccc
Confidence 99999999999887776666 7777766553
No 100
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.97 E-value=3.8e-05 Score=77.87 Aligned_cols=110 Identities=23% Similarity=0.354 Sum_probs=64.8
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHh-cCCC-eE--EEEEeCCCC----C------CC-----chhhhc-ccHHHH
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELL-KHSD-WN--VIVVDWAGG----S------LP-----LYTQAT-ANTRLV 166 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL-~~~d-~N--VI~VDw~g~----~------~~-----~Y~~a~-~n~r~V 166 (531)
..+.-+.||||||.++..+ ...|+.++- +... -. ++-|+-.|. | .. .|.... ++...-
T Consensus 8 ~~~~tPTifihG~~gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~q 85 (255)
T PF06028_consen 8 NQSTTPTIFIHGYGGTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQ 85 (255)
T ss_dssp --S-EEEEEE--TTGGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHH
T ss_pred ccCCCcEEEECCCCCChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHH
Confidence 3444567889999998743 356777775 3321 22 344443331 1 11 122223 467778
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhh-hhhc-----cCCcceeeecCCCCCc
Q psy545 167 GLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGY-AGQA-----IEGLGRITGLDPAEPY 222 (531)
Q Consensus 167 g~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~-ag~~-----~~~V~RItgLDPAgP~ 222 (531)
++.+...|..|.+.++ .+++.+|||||||.++.+ +..+ ++.|.+++.| |+|+
T Consensus 86 a~wl~~vl~~L~~~Y~--~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~I--a~pf 143 (255)
T PF06028_consen 86 AKWLKKVLKYLKKKYH--FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTI--AGPF 143 (255)
T ss_dssp HHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEE--S--T
T ss_pred HHHHHHHHHHHHHhcC--CCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEe--cccc
Confidence 8899999999987764 699999999999999874 4433 2347888888 4453
No 101
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=97.97 E-value=5.4e-05 Score=77.22 Aligned_cols=103 Identities=22% Similarity=0.294 Sum_probs=72.1
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCC-chhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLP-LYTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~-~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
...|||-+||-.+|+.+ +..|++.| ...+.++|.++|+|++.+ .|+.-.++-. +-+.+++.|.+..++. ++
T Consensus 34 ~~gTVv~~hGsPGSH~D--FkYi~~~l-~~~~iR~I~iN~PGf~~t~~~~~~~~~n~----er~~~~~~ll~~l~i~-~~ 105 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSHND--FKYIRPPL-DEAGIRFIGINYPGFGFTPGYPDQQYTNE----ERQNFVNALLDELGIK-GK 105 (297)
T ss_pred CceeEEEecCCCCCccc--hhhhhhHH-HHcCeEEEEeCCCCCCCCCCCcccccChH----HHHHHHHHHHHHcCCC-Cc
Confidence 34589999999999853 45666644 556999999999998753 3443332222 3344445555555655 88
Q ss_pred EEEEEechhhhhhhhhhhccCCcceeeecCCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQAIEGLGRITGLDPAE 220 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~~V~RItgLDPAg 220 (531)
+..+|||.|+-.|..++...+ +..++.+.|.|
T Consensus 106 ~i~~gHSrGcenal~la~~~~-~~g~~lin~~G 137 (297)
T PF06342_consen 106 LIFLGHSRGCENALQLAVTHP-LHGLVLINPPG 137 (297)
T ss_pred eEEEEeccchHHHHHHHhcCc-cceEEEecCCc
Confidence 999999999999997666554 45777888765
No 102
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.90 E-value=4.6e-05 Score=79.91 Aligned_cols=100 Identities=19% Similarity=0.257 Sum_probs=71.7
Q ss_pred CCCCCCceEEEEccCCCCCCchhHHHHHHHHhc-CCCeEEEEEeCCCCCC-CchhhhcccHHHHHHHHHHHHHHHHHhcC
Q psy545 105 NFDPKKKTKFIIHGFIDTPLSSWVKEMRRELLK-HSDWNVIVVDWAGGSL-PLYTQATANTRLVGLELAYFVNYLKDNYG 182 (531)
Q Consensus 105 ~fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~-~~d~NVI~VDw~g~~~-~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g 182 (531)
.|-..+..+++||||..+-... .....+-.-. .-+.-.|++-|+..+. ..|......+......++.+|+.|.+..
T Consensus 111 ~~s~~k~vlvFvHGfNntf~da-v~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~- 188 (377)
T COG4782 111 SFSSAKTVLVFVHGFNNTFEDA-VYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK- 188 (377)
T ss_pred cccCCCeEEEEEcccCCchhHH-HHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC-
Confidence 3456778899999998765422 2222221111 2357789999998876 4566555556667789999999997643
Q ss_pred CCCCcEEEEEechhhhhhhhhhhcc
Q psy545 183 LNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 183 ~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
+..+||||+||||..++..+-+.+
T Consensus 189 -~~~~I~ilAHSMGtwl~~e~LrQL 212 (377)
T COG4782 189 -PVKRIYLLAHSMGTWLLMEALRQL 212 (377)
T ss_pred -CCceEEEEEecchHHHHHHHHHHH
Confidence 579999999999999998877654
No 103
>KOG4627|consensus
Probab=97.88 E-value=2.7e-05 Score=76.01 Aligned_cols=92 Identities=18% Similarity=0.166 Sum_probs=58.2
Q ss_pred CCCCceEEEEcc--CCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCC
Q psy545 107 DPKKKTKFIIHG--FIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLN 184 (531)
Q Consensus 107 n~~~ptvviIHG--w~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~ 184 (531)
....|..|+||| |.......-.. ++..++ +.+|.|.+|++.-... +......-.+..+.++++.+.+. +
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~cls-iv~~a~-~~gY~vasvgY~l~~q------~htL~qt~~~~~~gv~filk~~~-n 134 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLS-IVGPAV-RRGYRVASVGYNLCPQ------VHTLEQTMTQFTHGVNFILKYTE-N 134 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccc-hhhhhh-hcCeEEEEeccCcCcc------cccHHHHHHHHHHHHHHHHHhcc-c
Confidence 456789999999 65432222222 233333 3589999999864432 11222233455666777665443 5
Q ss_pred CCcEEEEEechhhhhhhhhhhcc
Q psy545 185 PADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 185 ~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
.+++.+-|||.|||+|..|-.+.
T Consensus 135 ~k~l~~gGHSaGAHLa~qav~R~ 157 (270)
T KOG4627|consen 135 TKVLTFGGHSAGAHLAAQAVMRQ 157 (270)
T ss_pred ceeEEEcccchHHHHHHHHHHHh
Confidence 67899999999999999766554
No 104
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.84 E-value=6e-05 Score=73.01 Aligned_cols=90 Identities=23% Similarity=0.308 Sum_probs=55.2
Q ss_pred EEEEccCCCCCCchhHHHHHHHHhcC--CCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEE
Q psy545 113 KFIIHGFIDTPLSSWVKEMRRELLKH--SDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHM 190 (531)
Q Consensus 113 vviIHGw~~s~~~~w~~~l~~aLL~~--~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhL 190 (531)
+++||||.+++.+.=...+.+ +++. .+.+++++|.+.. + ..+.+.+ ..+.++. ..+++.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~-~~~~~~~~~~~~~p~l~~~-----p------~~a~~~l----~~~i~~~--~~~~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQ-YFAEHGPDIQYPCPDLPPF-----P------EEAIAQL----EQLIEEL--KPENVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHH-HHHHhCCCceEECCCCCcC-----H------HHHHHHH----HHHHHhC--CCCCeEE
Confidence 789999999886432333333 3332 2456676666532 1 1111222 2232222 4556999
Q ss_pred EEechhhhhhhhhhhccCCcceeeecCCCCCc
Q psy545 191 IGHSLGAHTAGYAGQAIEGLGRITGLDPAEPY 222 (531)
Q Consensus 191 IGHSLGAhVAg~ag~~~~~V~RItgLDPAgP~ 222 (531)
||.||||..|.+++.+++ +.. +.+.||-..
T Consensus 64 iGSSlGG~~A~~La~~~~-~~a-vLiNPav~p 93 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG-LPA-VLINPAVRP 93 (187)
T ss_pred EEEChHHHHHHHHHHHhC-CCE-EEEcCCCCH
Confidence 999999999999888765 444 788888543
No 105
>KOG4391|consensus
Probab=97.79 E-value=4.2e-05 Score=75.24 Aligned_cols=94 Identities=17% Similarity=0.218 Sum_probs=66.7
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
++||+++.||=.++.. ..+ .++.-++.+-++||++|++||.|.+.-..+...... +-...|++|++....+-.++
T Consensus 77 S~pTlLyfh~NAGNmG-hr~-~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~l---Ds~avldyl~t~~~~dktki 151 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMG-HRL-PIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKL---DSEAVLDYLMTRPDLDKTKI 151 (300)
T ss_pred CCceEEEEccCCCccc-chh-hHHHHHHHHcCceEEEEEeeccccCCCCccccceec---cHHHHHHHHhcCccCCcceE
Confidence 8999999999888763 222 344455556689999999999886532222222222 22234788887777888999
Q ss_pred EEEEechhhhhhhhhhhcc
Q psy545 189 HMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~ 207 (531)
.|.|-||||.||..++...
T Consensus 152 vlfGrSlGGAvai~lask~ 170 (300)
T KOG4391|consen 152 VLFGRSLGGAVAIHLASKN 170 (300)
T ss_pred EEEecccCCeeEEEeeccc
Confidence 9999999999998755543
No 106
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.74 E-value=8.2e-05 Score=73.89 Aligned_cols=100 Identities=15% Similarity=0.174 Sum_probs=66.7
Q ss_pred CCceEEEEccCCCCCCchhHHH-HHHHHhcCCCeEEEEEeCCCCC--CCc---hhhhcccHHHHHHHHHHHHHHHHHhcC
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKE-MRRELLKHSDWNVIVVDWAGGS--LPL---YTQATANTRLVGLELAYFVNYLKDNYG 182 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~-l~~aLL~~~d~NVI~VDw~g~~--~~~---Y~~a~~n~r~Vg~~la~~I~~L~~~~g 182 (531)
..|.||++||..++.. .+... =..+|.++.++-|+.++....+ ... +.....+-..-...|+.+|+++..++.
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 4689999999998863 22110 0124556678999999865322 111 111111111123468888999888899
Q ss_pred CCCCcEEEEEechhhhhhhhhhhccCC
Q psy545 183 LNPADVHMIGHSLGAHTAGYAGQAIEG 209 (531)
Q Consensus 183 ~~~~~vhLIGHSLGAhVAg~ag~~~~~ 209 (531)
++.++|++.|+|.||.++..++..++.
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd 120 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPD 120 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCc
Confidence 999999999999999999877665554
No 107
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.71 E-value=0.00018 Score=73.17 Aligned_cols=123 Identities=17% Similarity=0.212 Sum_probs=78.6
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcC--CCeEEEEEeCCCCCCCchhh---hcccHHHHHHHHHHHHHHHHH---hc
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKH--SDWNVIVVDWAGGSLPLYTQ---ATANTRLVGLELAYFVNYLKD---NY 181 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~--~d~NVI~VDw~g~~~~~Y~~---a~~n~r~Vg~~la~~I~~L~~---~~ 181 (531)
++.+|+|.|=.|-. .+.....++|.+. ..+.|+++...|+....... .....-.+..||...++.+.+ ..
T Consensus 2 ~~li~~IPGNPGlv--~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV--EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChH--HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 45788999887765 3444444555543 57999999999987533220 011122233455554444432 21
Q ss_pred CCCCCcEEEEEechhhhhhhhhhhccC----CcceeeecCCCCCccCCCCCCCCCCc
Q psy545 182 GLNPADVHMIGHSLGAHTAGYAGQAIE----GLGRITGLDPAEPYFQGMPPFARLDP 234 (531)
Q Consensus 182 g~~~~~vhLIGHSLGAhVAg~ag~~~~----~V~RItgLDPAgP~F~~~~~~~rLd~ 234 (531)
.....+++|||||+||.||..+.++.+ .|.+..+|=|.---....+...+|.+
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~ 136 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTP 136 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHH
Confidence 115688999999999999999888777 28899999887655554444444544
No 108
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.68 E-value=7.5e-05 Score=73.58 Aligned_cols=92 Identities=24% Similarity=0.232 Sum_probs=51.5
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcC-CCeE--EEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKH-SDWN--VIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~-~d~N--VI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
.-.+|+|||+.++.. .| ..+.+.+... +++. .|.+..... .+......+...|+.+++-|....+.......
T Consensus 4 ~hLvV~vHGL~G~~~-d~-~~~~~~l~~~~~~~~~~~i~~~~~~~---n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPA-DM-RYLKNHLEKIPEDLPNARIVVLGYSN---NEFKTFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CEEEEEeCCCCCCHH-HH-HHHHHHHHHhhhhcchhhhhhhcccc---cccccchhhHHHHHHHHHHHHHhccccccccc
Confidence 447999999999863 45 3344444331 1111 122211111 11122234566677776655544433332346
Q ss_pred cEEEEEechhhhhhhhhhhc
Q psy545 187 DVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~ 206 (531)
+|.+|||||||-|+-+|-..
T Consensus 79 ~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cceEEEecccHHHHHHHHHH
Confidence 89999999999999876554
No 109
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.65 E-value=0.00047 Score=69.01 Aligned_cols=107 Identities=13% Similarity=0.208 Sum_probs=74.6
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCC-C-CCchh--h-hc-------ccHHHHHHHHHHHHHHH
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGG-S-LPLYT--Q-AT-------ANTRLVGLELAYFVNYL 177 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~-~-~~~Y~--~-a~-------~n~r~Vg~~la~~I~~L 177 (531)
.|.||++|++.+-. ..+..+.+.|. .+||-|+++|.-.. + ...+. . .. .....+..++...+++|
T Consensus 27 ~P~VIv~hei~Gl~--~~i~~~a~rlA-~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L 103 (236)
T COG0412 27 FPGVIVLHEIFGLN--PHIRDVARRLA-KAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYL 103 (236)
T ss_pred CCEEEEEecccCCc--hHHHHHHHHHH-hCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHH
Confidence 38999999988765 24778887665 46999999998652 2 11111 1 11 11245666788888988
Q ss_pred HHhcCCCCCcEEEEEechhhhhhhhhhhccCCcceeeecCCC
Q psy545 178 KDNYGLNPADVHMIGHSLGAHTAGYAGQAIEGLGRITGLDPA 219 (531)
Q Consensus 178 ~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItgLDPA 219 (531)
......+.++|-++|+||||++|..++...++|...+..-|.
T Consensus 104 ~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~ 145 (236)
T COG0412 104 ARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGG 145 (236)
T ss_pred HhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCC
Confidence 755446789999999999999999877776556555554444
No 110
>KOG1515|consensus
Probab=97.64 E-value=0.0005 Score=72.37 Aligned_cols=109 Identities=18% Similarity=0.198 Sum_probs=73.2
Q ss_pred CCCceEEEEcc--C-CCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHH-HHHhcCC
Q psy545 108 PKKKTKFIIHG--F-IDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNY-LKDNYGL 183 (531)
Q Consensus 108 ~~~ptvviIHG--w-~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~-L~~~~g~ 183 (531)
...|.+|++|| | .++....-...+...+....++.|+.||||-.....++.+-.+ .=..+..+.+. +. +.++
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D---~~~Al~w~~~~~~~-~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDD---GWAALKWVLKNSWL-KLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchH---HHHHHHHHHHhHHH-HhCC
Confidence 67899999999 4 3443322233444445455689999999998877777654322 22345555553 22 4688
Q ss_pred CCCcEEEEEechhhhhhhhhhhccC-------CcceeeecCCCC
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQAIE-------GLGRITGLDPAE 220 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~~~-------~V~RItgLDPAg 220 (531)
++++|.|.|=|.||.+|..++.+.. .|.+++.+=|.-
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 9999999999999999887665432 266777775543
No 111
>KOG4667|consensus
Probab=97.63 E-value=0.00026 Score=69.74 Aligned_cols=102 Identities=16% Similarity=0.266 Sum_probs=71.0
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCC---chhhhcccHHHHHHHHHHHHHHHHHhcCC
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLP---LYTQATANTRLVGLELAYFVNYLKDNYGL 183 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~---~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~ 183 (531)
-.+..++|+.|||.++.....+..++.+ ++++++-++-+|++|-|.+ .|+ .|.+.-|++|...++.+.+ .
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~-~e~~gis~fRfDF~GnGeS~gsf~~---Gn~~~eadDL~sV~q~~s~---~ 102 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKA-LEKEGISAFRFDFSGNGESEGSFYY---GNYNTEADDLHSVIQYFSN---S 102 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHH-HHhcCceEEEEEecCCCCcCCcccc---CcccchHHHHHHHHHHhcc---C
Confidence 3467789999999998866666666554 4668999999999997753 232 2344456899999998853 2
Q ss_pred CCCcEEEEEechhhhhhhhhhhccCCcceeee
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQAIEGLGRITG 215 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItg 215 (531)
+..=-.++|||=|+-|+...+..+.++..++-
T Consensus 103 nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viN 134 (269)
T KOG4667|consen 103 NRVVPVILGHSKGGDVVLLYASKYHDIRNVIN 134 (269)
T ss_pred ceEEEEEEeecCccHHHHHHHHhhcCchheEE
Confidence 22334789999999999854444444444433
No 112
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.63 E-value=0.00018 Score=87.14 Aligned_cols=102 Identities=18% Similarity=0.171 Sum_probs=72.3
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
+.|++|++||+.++. ..|. .+...| . .+++|+.+|.++++... .....+..++++++..++.+. ....+
T Consensus 1067 ~~~~l~~lh~~~g~~-~~~~-~l~~~l-~-~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~-----~~~p~ 1135 (1296)
T PRK10252 1067 DGPTLFCFHPASGFA-WQFS-VLSRYL-D-PQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQ-----PHGPY 1135 (1296)
T ss_pred CCCCeEEecCCCCch-HHHH-HHHHhc-C-CCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhC-----CCCCE
Confidence 357799999999876 3564 455544 3 47999999999886431 223456667777766665542 23579
Q ss_pred EEEEechhhhhhhhhhhccC----CcceeeecCCCCC
Q psy545 189 HMIGHSLGAHTAGYAGQAIE----GLGRITGLDPAEP 221 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~----~V~RItgLDPAgP 221 (531)
+|+||||||.+|..++..+. .+..++.+|+..+
T Consensus 1136 ~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~ 1172 (1296)
T PRK10252 1136 HLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPP 1172 (1296)
T ss_pred EEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCc
Confidence 99999999999998777542 2888888887543
No 113
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=97.59 E-value=0.00057 Score=60.71 Aligned_cols=81 Identities=17% Similarity=0.308 Sum_probs=64.0
Q ss_pred eeEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCccC
Q psy545 380 HYRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVLQ 459 (531)
Q Consensus 380 ~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~~ 459 (531)
.|+|+|.+.....+ -+.+.+.|+|+|++|++....|.. .++.|..-+|.+. +.|+|+|..|++ ++.. ..
T Consensus 2 ~Y~I~V~TG~~~~A--GT~~~V~i~L~G~~g~S~~~~L~~----~F~~G~~d~F~v~-~~dLG~l~~i~l-~n~g---~~ 70 (109)
T cd02899 2 TYTASVQTGKDKEA--GTNGTIEITLLGSSGRSNPKTLSQ----GFYPGSLKRIRFR-AADVGDINAIIL-SNTA---LN 70 (109)
T ss_pred eEEEEEEECCCCCC--CccceEEEEEEECCCCcCCEEccC----ccCCCceEEEEEC-ccccCceEEEEE-ECCC---CC
Confidence 48999998775443 356899999999999998888772 3789999999999 899999999999 4332 22
Q ss_pred CceecccccCCcEEEEEEEEee
Q psy545 460 PRSLCFLWCNDHLYVSSIKVTE 481 (531)
Q Consensus 460 p~~w~~~w~~~~~~i~~i~v~~ 481 (531)
| .-++++|+|+.
T Consensus 71 ~----------~Wf~~~V~V~~ 82 (109)
T cd02899 71 D----------PWYCDYVRIKS 82 (109)
T ss_pred C----------CceeeEEEEEC
Confidence 2 22688999985
No 114
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.55 E-value=0.00023 Score=76.11 Aligned_cols=110 Identities=25% Similarity=0.260 Sum_probs=60.4
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCC-chh---hh------------------------
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLP-LYT---QA------------------------ 159 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~-~Y~---~a------------------------ 159 (531)
..-|++||-||+.++... ...++..|.++ ||-|++||.+.++.. .|. ..
T Consensus 98 ~~~PvvIFSHGlgg~R~~--yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTS--YSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp S-EEEEEEE--TT--TTT--THHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCEEEEeCCCCcchhh--HHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 568999999999998852 34566677664 999999999976431 111 00
Q ss_pred --c-----ccHHHHHHHHHHHHHHHHHh--------------------cCCCCCcEEEEEechhhhhhhhhhhccCCcce
Q psy545 160 --T-----ANTRLVGLELAYFVNYLKDN--------------------YGLNPADVHMIGHSLGAHTAGYAGQAIEGLGR 212 (531)
Q Consensus 160 --~-----~n~r~Vg~~la~~I~~L~~~--------------------~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V~R 212 (531)
. ..++.=.+++...++.|.+- -.+++++|.++|||+||..|..++..-..+..
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~ 254 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKA 254 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--E
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcce
Confidence 0 00111123444455554320 12357889999999999999988777677888
Q ss_pred eeecCCCC
Q psy545 213 ITGLDPAE 220 (531)
Q Consensus 213 ItgLDPAg 220 (531)
.+.|||..
T Consensus 255 ~I~LD~W~ 262 (379)
T PF03403_consen 255 GILLDPWM 262 (379)
T ss_dssp EEEES---
T ss_pred EEEeCCcc
Confidence 88999974
No 115
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.48 E-value=0.00039 Score=70.62 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=67.9
Q ss_pred ceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEE
Q psy545 111 KTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHM 190 (531)
Q Consensus 111 ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhL 190 (531)
|++|++|+-.|... .|. .+.. ++. ....|+.++.++.+... +-..+....++....-|..++ +-..++|
T Consensus 1 ~pLF~fhp~~G~~~-~~~-~L~~-~l~-~~~~v~~l~a~g~~~~~--~~~~~l~~~a~~yv~~Ir~~Q-----P~GPy~L 69 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYA-PLAA-ALG-PLLPVYGLQAPGYGAGE--QPFASLDDMAAAYVAAIRRVQ-----PEGPYVL 69 (257)
T ss_pred CCEEEEcCCCCcHH-HHH-HHHH-Hhc-cCceeeccccCcccccc--cccCCHHHHHHHHHHHHHHhC-----CCCCEEE
Confidence 57999999988762 332 3443 444 35889999988865311 112334444444433344332 4568999
Q ss_pred EEechhhhhhhhhhhccC--C--cceeeecCCCCC
Q psy545 191 IGHSLGAHTAGYAGQAIE--G--LGRITGLDPAEP 221 (531)
Q Consensus 191 IGHSLGAhVAg~ag~~~~--~--V~RItgLDPAgP 221 (531)
+||||||.||..+++.+. | |.+++.||+..+
T Consensus 70 ~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 70 LGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999998888774 3 999999999877
No 116
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.33 E-value=0.00042 Score=57.83 Aligned_cols=63 Identities=17% Similarity=0.182 Sum_probs=44.8
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhh-hcccHHHHHHHHHHHH
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQ-ATANTRLVGLELAYFV 174 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~-a~~n~r~Vg~~la~~I 174 (531)
.+.+++|+||+.+.. .+...+++.|.+ .|++|++.|++|+|.+.-.+ ...+...+-+++..+|
T Consensus 15 ~k~~v~i~HG~~eh~--~ry~~~a~~L~~-~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHS--GRYAHLAEFLAE-QGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCEEEEEeCCcHHHH--HHHHHHHHHHHh-CCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 366899999998765 356678776654 69999999999999865222 2345555556665554
No 117
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.31 E-value=0.00079 Score=69.13 Aligned_cols=104 Identities=22% Similarity=0.289 Sum_probs=71.8
Q ss_pred CCCceEEEEccCCCCCC-----chhHHHHHHHHhcCCCeEEEEEeCCCC-----CC-Cchhhh--cccHHHHHHHHHHHH
Q psy545 108 PKKKTKFIIHGFIDTPL-----SSWVKEMRRELLKHSDWNVIVVDWAGG-----SL-PLYTQA--TANTRLVGLELAYFV 174 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~-----~~w~~~l~~aLL~~~d~NVI~VDw~g~-----~~-~~Y~~a--~~n~r~Vg~~la~~I 174 (531)
.+.|.+|++||=.+++. +.| ++|.+++++-|+.+|=-.. .. ..|..+ ......|+ .|++++
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~-----d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVg-flr~lv 132 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGW-----DALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVG-FLRALV 132 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccch-----hhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHH-HHHHHH
Confidence 35589999999988763 233 4677788999999962211 11 122111 33445555 788888
Q ss_pred HHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC----cceeeecC
Q psy545 175 NYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG----LGRITGLD 217 (531)
Q Consensus 175 ~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~----V~RItgLD 217 (531)
..|..++++++++|++.|.|-||.+|..++...+. +.-|.|+=
T Consensus 133 a~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 133 AKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 88888999999999999999999999976655443 44455543
No 118
>PRK04940 hypothetical protein; Provisional
Probab=97.30 E-value=0.00087 Score=64.59 Aligned_cols=89 Identities=19% Similarity=0.198 Sum_probs=52.4
Q ss_pred EEEEccCCCCCCchh--HHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEE
Q psy545 113 KFIIHGFIDTPLSSW--VKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHM 190 (531)
Q Consensus 113 vviIHGw~~s~~~~w--~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhL 190 (531)
+++||||.+|+.++- ...+. ++ ..+.+++ +++ +.++.. ..+.+.+.|..+... +. .+++.|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~--~~-~p~~~~~--~l~----~~~P~~------a~~~l~~~i~~~~~~-~~-~~~~~l 64 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ--FI-DPDVRLI--SYS----TLHPKH------DMQHLLKEVDKMLQL-SD-DERPLI 64 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe--ee-CCCCeEE--ECC----CCCHHH------HHHHHHHHHHHhhhc-cC-CCCcEE
Confidence 789999999986521 22222 33 3456655 333 123321 112333344332211 11 257999
Q ss_pred EEechhhhhhhhhhhccCCcceeeecCCCC
Q psy545 191 IGHSLGAHTAGYAGQAIEGLGRITGLDPAE 220 (531)
Q Consensus 191 IGHSLGAhVAg~ag~~~~~V~RItgLDPAg 220 (531)
||+||||.-|.+++.... + +-+.++||-
T Consensus 65 iGSSLGGyyA~~La~~~g-~-~aVLiNPAv 92 (180)
T PRK04940 65 CGVGLGGYWAERIGFLCG-I-RQVIFNPNL 92 (180)
T ss_pred EEeChHHHHHHHHHHHHC-C-CEEEECCCC
Confidence 999999999999888766 3 567888884
No 119
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.28 E-value=0.00057 Score=71.88 Aligned_cols=102 Identities=21% Similarity=0.352 Sum_probs=68.8
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeE---EEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWN---VIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~N---VI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
.-+++++||...+. ..|. .|. ..+...++. |+.+++.+. ...++. ...++++...|+......| .+
T Consensus 59 ~~pivlVhG~~~~~-~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~-~~~~~~-----~~~~~ql~~~V~~~l~~~g--a~ 127 (336)
T COG1075 59 KEPIVLVHGLGGGY-GNFL-PLD-YRLAILGWLTNGVYAFELSGG-DGTYSL-----AVRGEQLFAYVDEVLAKTG--AK 127 (336)
T ss_pred CceEEEEccCcCCc-chhh-hhh-hhhcchHHHhccccccccccc-CCCccc-----cccHHHHHHHHHHHHhhcC--CC
Confidence 33789999995554 3443 333 335555666 888888755 333332 2346677777776554444 48
Q ss_pred cEEEEEechhhhhhhhhhhccC--C-cceeeecCCCCCc
Q psy545 187 DVHMIGHSLGAHTAGYAGQAIE--G-LGRITGLDPAEPY 222 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~~~--~-V~RItgLDPAgP~ 222 (531)
++.||||||||-++-+.....+ . |.++|.|.++-.+
T Consensus 128 ~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 128 KVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 9999999999999998777666 3 9999999765443
No 120
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.26 E-value=0.0026 Score=58.25 Aligned_cols=90 Identities=16% Similarity=0.132 Sum_probs=68.6
Q ss_pred ceeEEEEEEcCCCCCccceeeeEEEEEEeCCCceeeeecCC-------CCcccccCCceEEEEEeccCCCCceeEEEEEE
Q psy545 379 HHYRITLDLARPPRAETWVQGFMRVSLHSDNGVIRNLDLTP-------NGYEKLEHGTSRSFVVTHPEDVGTINKVEFYW 451 (531)
Q Consensus 379 ~~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~~~~~~~-------~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w 451 (531)
+.|+|+|.+.....+. +...+.|+|+|.+|++..+.+.. .....++.|.+-+|++..+.++|+|.+|++ |
T Consensus 1 ~~Y~I~V~TG~~~gAG--TdanV~i~l~G~~G~s~~~~l~~~~~~l~~~~~~~FerG~~d~F~v~~~~~lG~l~~irI-~ 77 (129)
T cd01754 1 CVYTIYVQTGSIWKAG--TDSRISLQIYDADGPGLRIANLEAWGGLMGAGHDYFERGNLDRFSGRGPCLPSPPCWMNL-T 77 (129)
T ss_pred CEEEEEEEECCCcccC--CcceEEEEEEeCCCCcccEEcccccccccccccccccCCCccEEEEEeccCCCCeEEEEE-E
Confidence 3699999988754443 46789999999999988776621 112468999999999999999999999999 7
Q ss_pred EecCCccCCceecccccCCcEEEEEEEEeec
Q psy545 452 EYDMDVLQPRSLCFLWCNDHLYVSSIKVTET 482 (531)
Q Consensus 452 ~~~~~~~~p~~w~~~w~~~~~~i~~i~v~~~ 482 (531)
..+. -..| .-++.+|.|+.+
T Consensus 78 HDn~-G~~p----------~W~l~~V~V~d~ 97 (129)
T cd01754 78 SDGT-GNHP----------GWYVNYVEVTQA 97 (129)
T ss_pred ECCC-CCCC----------CcccCEEEEEeC
Confidence 7552 2333 225788999876
No 121
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.22 E-value=0.0016 Score=63.26 Aligned_cols=84 Identities=20% Similarity=0.294 Sum_probs=65.8
Q ss_pred HHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC
Q psy545 129 KEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 129 ~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
..+.++|-+ .|+.||.||-.. |......-..++++++.+|+...++. ..++|.|||+|.||-|.-++-.+++
T Consensus 19 ~~~a~~l~~-~G~~VvGvdsl~-----Yfw~~rtP~~~a~Dl~~~i~~y~~~w--~~~~vvLiGYSFGADvlP~~~nrLp 90 (192)
T PF06057_consen 19 KQIAEALAK-QGVPVVGVDSLR-----YFWSERTPEQTAADLARIIRHYRARW--GRKRVVLIGYSFGADVLPFIYNRLP 90 (192)
T ss_pred HHHHHHHHH-CCCeEEEechHH-----HHhhhCCHHHHHHHHHHHHHHHHHHh--CCceEEEEeecCCchhHHHHHhhCC
Confidence 467776654 699999999653 44445556778999999998876654 4689999999999999888777775
Q ss_pred -----CcceeeecCCCC
Q psy545 209 -----GLGRITGLDPAE 220 (531)
Q Consensus 209 -----~V~RItgLDPAg 220 (531)
.|..++.|.|+.
T Consensus 91 ~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 91 AALRARVAQVVLLSPST 107 (192)
T ss_pred HHHHhheeEEEEeccCC
Confidence 299999998874
No 122
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.21 E-value=0.0022 Score=70.02 Aligned_cols=112 Identities=21% Similarity=0.330 Sum_probs=68.8
Q ss_pred CCCC-CceEEEEcc--C-CCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC-----Cchh--hh-cccHHHHHHHHHHH
Q psy545 106 FDPK-KKTKFIIHG--F-IDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL-----PLYT--QA-TANTRLVGLELAYF 173 (531)
Q Consensus 106 fn~~-~ptvviIHG--w-~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~-----~~Y~--~a-~~n~r~Vg~~la~~ 173 (531)
++.+ .|.+|+||| | ++++...+.. - ..|.++.++-|+.|++|-+.. +.+. ++ ..|.-.. +....
T Consensus 89 ~~a~~~PVmV~IHGG~y~~Gs~s~~~yd-g-s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~--DqilA 164 (491)
T COG2272 89 VPAEKLPVMVYIHGGGYIMGSGSEPLYD-G-SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLL--DQILA 164 (491)
T ss_pred CCCCCCcEEEEEeccccccCCCcccccC-h-HHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHH--HHHHH
Confidence 4444 599999999 3 4555444432 2 345555569999999996642 2222 11 2232221 22222
Q ss_pred HHHHH---HhcCCCCCcEEEEEechhhhhhhhhhh--ccCC-cceeeecCCCCC
Q psy545 174 VNYLK---DNYGLNPADVHMIGHSLGAHTAGYAGQ--AIEG-LGRITGLDPAEP 221 (531)
Q Consensus 174 I~~L~---~~~g~~~~~vhLIGHSLGAhVAg~ag~--~~~~-V~RItgLDPAgP 221 (531)
|+|+. +.+|-+++||.|+|+|.||+.+...-. ..+| ..|.+.+.|+..
T Consensus 165 LkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 165 LKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 45554 357889999999999999997764333 3345 677777776654
No 123
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.18 E-value=0.0013 Score=74.65 Aligned_cols=104 Identities=20% Similarity=0.255 Sum_probs=64.3
Q ss_pred cCCCCCC--ceEEEEccCCCCCCc-hhHHHHHHHHhcCCCeEEEEEeCCCCCC--Cchhhhcc--cHHHHHHHHHHHHHH
Q psy545 104 SNFDPKK--KTKFIIHGFIDTPLS-SWVKEMRRELLKHSDWNVIVVDWAGGSL--PLYTQATA--NTRLVGLELAYFVNY 176 (531)
Q Consensus 104 s~fn~~~--ptvviIHGw~~s~~~-~w~~~l~~aLL~~~d~NVI~VDw~g~~~--~~Y~~a~~--n~r~Vg~~la~~I~~ 176 (531)
.++++.+ |++|+|||=...... .+...+ +++...||.|+.+|++|-.. ..|.++.. --..--+++-..+++
T Consensus 386 ~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~--q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~ 463 (620)
T COG1506 386 PGFDPRKKYPLIVYIHGGPSAQVGYSFNPEI--QVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDA 463 (620)
T ss_pred CCCCCCCCCCEEEEeCCCCccccccccchhh--HHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHH
Confidence 3455554 899999997543321 222222 34445699999999997532 12222111 000112455556666
Q ss_pred HHHhcCCCCCcEEEEEechhhhhhhhhhhccCC
Q psy545 177 LKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG 209 (531)
Q Consensus 177 L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~ 209 (531)
|.+.-.++.++++|.|||.||.++..++.+.+.
T Consensus 464 l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~ 496 (620)
T COG1506 464 LVKLPLVDPERIGITGGSYGGYMTLLAATKTPR 496 (620)
T ss_pred HHhCCCcChHHeEEeccChHHHHHHHHHhcCch
Confidence 655445678999999999999999987766553
No 124
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.17 E-value=0.00052 Score=67.67 Aligned_cols=111 Identities=16% Similarity=0.228 Sum_probs=64.0
Q ss_pred CCCceEEEEccCCCCCCchh-HHHHHHHHhcC---CCeEEEEEeCCCCCC--Cchh---------hhcccHHHHHHHH-H
Q psy545 108 PKKKTKFIIHGFIDTPLSSW-VKEMRRELLKH---SDWNVIVVDWAGGSL--PLYT---------QATANTRLVGLEL-A 171 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w-~~~l~~aLL~~---~d~NVI~VDw~g~~~--~~Y~---------~a~~n~r~Vg~~l-a 171 (531)
..-|+++++||+.... ..| .....+.+... ....||+++...... ..+. ............| .
T Consensus 22 ~~~PvlylldG~~~~~-~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWF-RNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTEEEEEEESHTTHHH-HHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCEEEEEccCCcccc-ccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 4568999999981111 111 22233333332 236677888765441 1111 1111112222222 3
Q ss_pred HHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 172 YFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 172 ~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
+++.++.+.+....++..|+||||||..|.+++.+.+. .+.+..+.|+
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 45566666666655558999999999999998877766 8888888765
No 125
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.16 E-value=0.0012 Score=72.12 Aligned_cols=104 Identities=19% Similarity=0.257 Sum_probs=59.9
Q ss_pred CCCCceEEEEcc--CC-CCCCchhHHHHHHHHhcCCC-eEEEEEeCCCCCCC----chhhhcccHHHHHHHHHHHHHHHH
Q psy545 107 DPKKKTKFIIHG--FI-DTPLSSWVKEMRRELLKHSD-WNVIVVDWAGGSLP----LYTQATANTRLVGLELAYFVNYLK 178 (531)
Q Consensus 107 n~~~ptvviIHG--w~-~s~~~~w~~~l~~aLL~~~d-~NVI~VDw~g~~~~----~Y~~a~~n~r~Vg~~la~~I~~L~ 178 (531)
+...|++|+||| |. ++...... ..|....+ +-|+.+++|-+... .-.....|... .+....++|+.
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~~~----~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~--~D~~~al~wv~ 165 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLYPG----DGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGL--KDQRLALKWVQ 165 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCCCh----HHHHhcCCCEEEEEecccccccccccCCCCCCCcchhH--HHHHHHHHHHH
Confidence 356799999999 32 33322112 23333344 89999999944321 00011123221 23344455554
Q ss_pred H---hcCCCCCcEEEEEechhhhhhhhhhhccC--C-cceeeec
Q psy545 179 D---NYGLNPADVHMIGHSLGAHTAGYAGQAIE--G-LGRITGL 216 (531)
Q Consensus 179 ~---~~g~~~~~vhLIGHSLGAhVAg~ag~~~~--~-V~RItgL 216 (531)
+ .+|.++++|+|+|||.||+.+..+..... + +.|.+.+
T Consensus 166 ~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~ 209 (493)
T cd00312 166 DNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQ 209 (493)
T ss_pred HHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhh
Confidence 3 46889999999999999999886544322 2 4554443
No 126
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.16 E-value=0.0011 Score=66.45 Aligned_cols=123 Identities=19% Similarity=0.136 Sum_probs=71.4
Q ss_pred CceEEEEccCCCCCC--chhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 110 KKTKFIIHGFIDTPL--SSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 110 ~ptvviIHGw~~s~~--~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
++.+|..|=-+++.. ..|.. .+. .++.+++|.|+|.+.-.-.....++...+..|+.-|.. -..-..
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~-----~lp-~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~-----~~~d~P 75 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSR-----RLP-ADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP-----PLLDAP 75 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHh-----hCC-chhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc-----ccCCCC
Confidence 445666664445442 34543 222 36899999999987532223344555555555544431 012357
Q ss_pred EEEEEechhhhhhhhhhhccCC----cceeeecCCCCCccCCCCCCCCCCccchhhhHHhhh
Q psy545 188 VHMIGHSLGAHTAGYAGQAIEG----LGRITGLDPAEPYFQGMPPFARLDPTDADLVDVIHT 245 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~~~----V~RItgLDPAgP~F~~~~~~~rLd~sDA~fVDvIHT 245 (531)
+-+.||||||.||-.+++++.. +..+....-..|..... ......+|++|++.|--
T Consensus 76 ~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~--~~i~~~~D~~~l~~l~~ 135 (244)
T COG3208 76 FALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG--KQIHHLDDADFLADLVD 135 (244)
T ss_pred eeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc--CCccCCCHHHHHHHHHH
Confidence 9999999999999999888763 22223333333432221 22344578989887643
No 127
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.09 E-value=0.0019 Score=72.00 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=64.9
Q ss_pred CCceEEEEccCCCCCC---chhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCC
Q psy545 109 KKKTKFIIHGFIDTPL---SSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~---~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~ 185 (531)
.+++++||+.|....- -.--..|++.|++ .|+.|++|||+.-+... .........+.|...|+.+.+..| .
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~-qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG--~ 287 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLK-NQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITG--S 287 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHH-cCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcC--C
Confidence 4567999999874321 0001235555665 59999999999754321 111222222366666777765544 6
Q ss_pred CcEEEEEechhhhhhh-----hhhhccC-CcceeeecC
Q psy545 186 ADVHMIGHSLGAHTAG-----YAGQAIE-GLGRITGLD 217 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg-----~ag~~~~-~V~RItgLD 217 (531)
++|+++||||||-++. ++++... .|..+|.|-
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltlla 325 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLV 325 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeee
Confidence 8999999999998876 3444443 388888663
No 128
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=96.96 E-value=0.001 Score=71.57 Aligned_cols=105 Identities=16% Similarity=0.160 Sum_probs=60.0
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCC-chhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLP-LYTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~-~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
..|+||+ -|=.++..+.+.....+ ++...|++++++|-+|-|.+ .++.. .++.. ....++++|.+.--++.++
T Consensus 189 p~P~VIv-~gGlDs~qeD~~~l~~~-~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~---l~~aVLd~L~~~p~VD~~R 262 (411)
T PF06500_consen 189 PYPTVIV-CGGLDSLQEDLYRLFRD-YLAPRGIAMLTVDMPGQGESPKWPLT-QDSSR---LHQAVLDYLASRPWVDHTR 262 (411)
T ss_dssp -EEEEEE-E--TTS-GGGGHHHHHC-CCHHCT-EEEEE--TTSGGGTTT-S--S-CCH---HHHHHHHHHHHSTTEEEEE
T ss_pred CCCEEEE-eCCcchhHHHHHHHHHH-HHHhCCCEEEEEccCCCcccccCCCC-cCHHH---HHHHHHHHHhcCCccChhh
Confidence 3455554 55455554454433333 34446999999999998753 22211 12222 2334577776554567889
Q ss_pred EEEEEechhhhhhhhhhh-ccCCcceeeecCCC
Q psy545 188 VHMIGHSLGAHTAGYAGQ-AIEGLGRITGLDPA 219 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~-~~~~V~RItgLDPA 219 (531)
|.++|.|+||++|..++. +-+.|..++.+.|.
T Consensus 263 V~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 263 VGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP 295 (411)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTT-SEEEEES--
T ss_pred eEEEEeccchHHHHHHHHhcccceeeEeeeCch
Confidence 999999999999998765 44568898988875
No 129
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=96.94 E-value=0.0027 Score=64.24 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=72.4
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHH--------HHHhcCCCeEEEEEeCCCCCCCc--hhhhcccHHHHHHHHHHHHHH
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMR--------RELLKHSDWNVIVVDWAGGSLPL--YTQATANTRLVGLELAYFVNY 176 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~--------~aLL~~~d~NVI~VDw~g~~~~~--Y~~a~~n~r~Vg~~la~~I~~ 176 (531)
....|+||..|+|..+....+..... ..+.+ .||.||++|-||.+.+. +... .+.-+++..+.|+|
T Consensus 17 ~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~-~GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W 92 (272)
T PF02129_consen 17 GGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAE-RGYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEW 92 (272)
T ss_dssp SSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHH-TT-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHH
T ss_pred CCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHh-CCCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHH
Confidence 44678999999998654211111100 01444 59999999999976542 2111 23346788899999
Q ss_pred HHHhcCCCCCcEEEEEechhhhhhhhhhh-ccCCcceeeecCCCCCccC
Q psy545 177 LKDNYGLNPADVHMIGHSLGAHTAGYAGQ-AIEGLGRITGLDPAEPYFQ 224 (531)
Q Consensus 177 L~~~~g~~~~~vhLIGHSLGAhVAg~ag~-~~~~V~RItgLDPAgP~F~ 224 (531)
|..+ ..+..+|-++|.|.+|.++..++. ..+.|.-|+...+....+.
T Consensus 93 ~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 93 IAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred HHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 9765 555679999999999999998766 5556888777665544443
No 130
>KOG2984|consensus
Probab=96.92 E-value=0.0032 Score=61.66 Aligned_cols=115 Identities=16% Similarity=0.180 Sum_probs=78.7
Q ss_pred ccccCCCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHh
Q psy545 101 IEKSNFDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDN 180 (531)
Q Consensus 101 i~~s~fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~ 180 (531)
|..+....+..-+++|-|-.++...+|-.++.. |.....+.||++|-+|.|.+.-++-..-+...-++....++ |++.
T Consensus 33 l~y~~~G~G~~~iLlipGalGs~~tDf~pql~~-l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avd-LM~a 110 (277)
T KOG2984|consen 33 LGYCKYGHGPNYILLIPGALGSYKTDFPPQLLS-LFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVD-LMEA 110 (277)
T ss_pred eeeeecCCCCceeEecccccccccccCCHHHHh-cCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHH-HHHH
Confidence 444556666678999999999988889887754 44433499999999999876544433333333333333333 3332
Q ss_pred cCCCCCcEEEEEechhhhhhhhh-hhccCCcceeeecCCC
Q psy545 181 YGLNPADVHMIGHSLGAHTAGYA-GQAIEGLGRITGLDPA 219 (531)
Q Consensus 181 ~g~~~~~vhLIGHSLGAhVAg~a-g~~~~~V~RItgLDPA 219 (531)
++.+++.|+|+|=||..|..+ |+....|.|++....+
T Consensus 111 --Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ 148 (277)
T KOG2984|consen 111 --LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAA 148 (277)
T ss_pred --hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeeccc
Confidence 368999999999999999975 4554459998876543
No 131
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.92 E-value=0.011 Score=62.36 Aligned_cols=107 Identities=19% Similarity=0.202 Sum_probs=70.0
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC--Cc-----hhhhcccH----HHHHHHHHHHHHHH
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL--PL-----YTQATANT----RLVGLELAYFVNYL 177 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~--~~-----Y~~a~~n~----r~Vg~~la~~I~~L 177 (531)
.+|..|.+.|-++.+...-..-|+..|++. |++-+++.-+-++. +. ....+.+. +..-.+.+.++.||
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 388888888888765311122346777775 99999998776653 11 11112222 12224567788888
Q ss_pred HHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 178 KDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 178 ~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
.++ | ..++-|.|.|||||+|..++...+. |.-+-.|.|+
T Consensus 170 ~~~-G--~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 170 ERE-G--YGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred Hhc-C--CCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 765 5 4599999999999999998887776 6655555543
No 132
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.89 E-value=0.007 Score=65.51 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=65.7
Q ss_pred CCCceEEEEcc--CCCCCCchhHHHHHHHHhcCC---CeEEEEEeCCCCC-C-CchhhhcccHHHHHHHHHHHHHHHHHh
Q psy545 108 PKKKTKFIIHG--FIDTPLSSWVKEMRRELLKHS---DWNVIVVDWAGGS-L-PLYTQATANTRLVGLELAYFVNYLKDN 180 (531)
Q Consensus 108 ~~~ptvviIHG--w~~s~~~~w~~~l~~aLL~~~---d~NVI~VDw~g~~-~-~~Y~~a~~n~r~Vg~~la~~I~~L~~~ 180 (531)
...|+++++|| |.... .+..+.+.|.+.+ -+-|+.+|-.... . ..|+....-.+.+.++ ++-++.+.
T Consensus 207 ~~~PvlyllDG~~w~~~~---~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~e---LlP~I~~~ 280 (411)
T PRK10439 207 EERPLAILLDGQFWAESM---PVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQE---LLPQVRAI 280 (411)
T ss_pred CCCCEEEEEECHHhhhcC---CHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHH---HHHHHHHh
Confidence 46799999999 43332 2345566666543 2456777753221 1 1232221122223333 34444444
Q ss_pred cCC--CCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 181 YGL--NPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 181 ~g~--~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
+.+ +.++..|+|+||||..|.+++.+.+. .+++..+.|+
T Consensus 281 y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 281 APFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred CCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 444 56789999999999999999887776 8999998876
No 133
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=96.86 E-value=0.0042 Score=65.04 Aligned_cols=109 Identities=17% Similarity=0.137 Sum_probs=66.3
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC-C-ch------------hhhcc------cHHHH
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL-P-LY------------TQATA------NTRLV 166 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~-~-~Y------------~~a~~------n~r~V 166 (531)
....|.||..||+.+.. ..|...+. +. ..|+-|+++|.+|.+. + .+ ..... ..+.+
T Consensus 80 ~~~~Pavv~~hGyg~~~-~~~~~~~~--~a-~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~ 155 (320)
T PF05448_consen 80 KGKLPAVVQFHGYGGRS-GDPFDLLP--WA-AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRV 155 (320)
T ss_dssp SSSEEEEEEE--TT--G-GGHHHHHH--HH-HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHH
T ss_pred CCCcCEEEEecCCCCCC-CCcccccc--cc-cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHH
Confidence 45678999999999875 35554332 33 3599999999998761 1 11 11111 13445
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCCcceeeecCCC
Q psy545 167 GLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEGLGRITGLDPA 219 (531)
Q Consensus 167 g~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItgLDPA 219 (531)
-.+....++.|...-.++.++|.+.|.|.||.+|..++..-++|.++...-|+
T Consensus 156 ~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~ 208 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPF 208 (320)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESES
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCC
Confidence 55666667777655566789999999999999999877765556666555443
No 134
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=96.85 E-value=0.0015 Score=68.87 Aligned_cols=125 Identities=18% Similarity=0.226 Sum_probs=74.9
Q ss_pred CceEEEEccCCCCCC-c--------hhHHHHHHHH--hcCCCeEEEEEeCCCCCC---C---------chhhhcccHHHH
Q psy545 110 KKTKFIIHGFIDTPL-S--------SWVKEMRREL--LKHSDWNVIVVDWAGGSL---P---------LYTQATANTRLV 166 (531)
Q Consensus 110 ~ptvviIHGw~~s~~-~--------~w~~~l~~aL--L~~~d~NVI~VDw~g~~~---~---------~Y~~a~~n~r~V 166 (531)
...|++.||++++.. . .|...++-.= ++-..|-||++|--|+.. . .|...-.++ .|
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~-ti 129 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVI-TI 129 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcc-cH
Confidence 346899999998653 1 2876664321 334569999999987531 1 111111111 12
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEE-EEEechhhhhhhhhhhccCC-cceeeecCCCCCccCCCCCCCCCCccchhh----h
Q psy545 167 GLELAYFVNYLKDNYGLNPADVH-MIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEPYFQGMPPFARLDPTDADL----V 240 (531)
Q Consensus 167 g~~la~~I~~L~~~~g~~~~~vh-LIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP~F~~~~~~~rLd~sDA~f----V 240 (531)
...|.. -+.|.+.+| .++++ +||-||||+.|...+..++. |.+++-|.-+ .|+++...-| -
T Consensus 130 ~D~V~a-q~~ll~~LG--I~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~----------~r~s~~~ia~~~~~r 196 (368)
T COG2021 130 RDMVRA-QRLLLDALG--IKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA----------ARLSAQNIAFNEVQR 196 (368)
T ss_pred HHHHHH-HHHHHHhcC--cceEeeeeccChHHHHHHHHHHhChHHHhhhheeccc----------ccCCHHHHHHHHHHH
Confidence 222222 234445555 57887 99999999999965555554 9998877432 4566655433 4
Q ss_pred HHhhhcCC
Q psy545 241 DVIHTDGS 248 (531)
Q Consensus 241 DvIHTd~~ 248 (531)
++|+.|..
T Consensus 197 ~AI~~DP~ 204 (368)
T COG2021 197 QAIEADPD 204 (368)
T ss_pred HHHHhCCC
Confidence 56777765
No 135
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.85 E-value=0.0029 Score=69.00 Aligned_cols=90 Identities=18% Similarity=0.152 Sum_probs=59.0
Q ss_pred HHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhcc
Q psy545 128 VKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 128 ~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
...|+++|.+ .||.+ ..|..+++...- ++ .......+.++++|+.+.+.. ...+|+||||||||.+|.+.....
T Consensus 110 ~~~li~~L~~-~GY~~-~~dL~g~gYDwR-~~-~~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 110 FHDMIEQLIK-WGYKE-GKTLFGFGYDFR-QS-NRLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred HHHHHHHHHH-cCCcc-CCCcccCCCCcc-cc-ccHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHHHHHHHC
Confidence 3567777654 46644 788888775421 11 112344578888888876654 357899999999999998544332
Q ss_pred C----C-cceeeecCCCCCccCCC
Q psy545 208 E----G-LGRITGLDPAEPYFQGM 226 (531)
Q Consensus 208 ~----~-V~RItgLDPAgP~F~~~ 226 (531)
+ + |.+++.| |+| |.+.
T Consensus 184 p~~~~k~I~~~I~l--a~P-~~Gs 204 (440)
T PLN02733 184 SDVFEKYVNSWIAI--AAP-FQGA 204 (440)
T ss_pred CHhHHhHhccEEEE--CCC-CCCC
Confidence 2 3 8898888 445 5554
No 136
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=96.79 E-value=0.0046 Score=59.26 Aligned_cols=91 Identities=15% Similarity=0.222 Sum_probs=55.7
Q ss_pred ceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEE
Q psy545 111 KTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHM 190 (531)
Q Consensus 111 ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhL 190 (531)
+.++||||+.+|+...|......++.. +-.|+. .+. ..+..++-++.+-+.+. .-.+.++|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~-----a~rveq-----~~w-----~~P~~~dWi~~l~~~v~----a~~~~~vl 63 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN-----ARRVEQ-----DDW-----EAPVLDDWIARLEKEVN----AAEGPVVL 63 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc-----chhccc-----CCC-----CCCCHHHHHHHHHHHHh----ccCCCeEE
Confidence 568999999999877887665544432 111111 111 11223444554444442 23455999
Q ss_pred EEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 191 IGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 191 IGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
|+||||.-++...+.+... |..+..+.|+-
T Consensus 64 VAHSLGc~~v~h~~~~~~~~V~GalLVAppd 94 (181)
T COG3545 64 VAHSLGCATVAHWAEHIQRQVAGALLVAPPD 94 (181)
T ss_pred EEecccHHHHHHHHHhhhhccceEEEecCCC
Confidence 9999999988866666554 77777776654
No 137
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=96.79 E-value=0.0049 Score=64.67 Aligned_cols=91 Identities=19% Similarity=0.304 Sum_probs=60.5
Q ss_pred CCceEEEEccCCCCCC--------chhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHH-
Q psy545 109 KKKTKFIIHGFIDTPL--------SSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKD- 179 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~--------~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~- 179 (531)
..+.+++.-|=.+..+ ..|+..+.+ ..+.||++.+++|-+.+.-. .+...+.++-...++.|.+
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak----~~~aNvl~fNYpGVg~S~G~---~s~~dLv~~~~a~v~yL~d~ 208 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAK----ELGANVLVFNYPGVGSSTGP---PSRKDLVKDYQACVRYLRDE 208 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHH----HcCCcEEEECCCccccCCCC---CCHHHHHHHHHHHHHHHHhc
Confidence 4567888777433221 134444443 34899999999997654211 1234455555566777765
Q ss_pred hcCCCCCcEEEEEechhhhhhhhhhhc
Q psy545 180 NYGLNPADVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 180 ~~g~~~~~vhLIGHSLGAhVAg~ag~~ 206 (531)
..|..+++|.+-||||||.|++.|.+.
T Consensus 209 ~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 209 EQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred ccCCChheEEEeeccccHHHHHHHHHh
Confidence 357889999999999999999886654
No 138
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.77 E-value=0.0059 Score=61.61 Aligned_cols=106 Identities=25% Similarity=0.321 Sum_probs=68.6
Q ss_pred eEEEEccCCCCCCchhHHHHHHHHhcCC----CeEEEEEeCCCC----CC----Cchh-------hhcccHHHHHHHHHH
Q psy545 112 TKFIIHGFIDTPLSSWVKEMRRELLKHS----DWNVIVVDWAGG----SL----PLYT-------QATANTRLVGLELAY 172 (531)
Q Consensus 112 tvviIHGw~~s~~~~w~~~l~~aLL~~~----d~NVI~VDw~g~----~~----~~Y~-------~a~~n~r~Vg~~la~ 172 (531)
+.|+|||+.++.++ +..|+..|+... .-=++.||-.|. |. ..|| .-.++....+.-+..
T Consensus 47 PTIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 47 PTIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ceEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 35788999998853 567787777543 234677776652 10 1122 122233444667777
Q ss_pred HHHHHHHhcCCCCCcEEEEEechhhhhhh-hhhhc-----cCCcceeeecCCCCCcc
Q psy545 173 FVNYLKDNYGLNPADVHMIGHSLGAHTAG-YAGQA-----IEGLGRITGLDPAEPYF 223 (531)
Q Consensus 173 ~I~~L~~~~g~~~~~vhLIGHSLGAhVAg-~ag~~-----~~~V~RItgLDPAgP~F 223 (531)
.+..|.+++ +..++.+|||||||--+. |+..+ ++.|..++.| ++|+-
T Consensus 125 ~msyL~~~Y--~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l--~gpfN 177 (288)
T COG4814 125 AMSYLQKHY--NIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSL--AGPFN 177 (288)
T ss_pred HHHHHHHhc--CCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEe--ccccc
Confidence 888887765 678999999999998655 45443 2348888888 45653
No 139
>KOG2112|consensus
Probab=96.71 E-value=0.0079 Score=59.00 Aligned_cols=107 Identities=18% Similarity=0.253 Sum_probs=74.4
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCC-------CC--CCchh---------hhcccHHHHHHHHH
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAG-------GS--LPLYT---------QATANTRLVGLELA 171 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g-------~~--~~~Y~---------~a~~n~r~Vg~~la 171 (531)
+-+||++||..+++. .|.+.+.. +.-.+...|++--+. ++ ...|. .........+..++
T Consensus 3 ~atIi~LHglGDsg~-~~~~~~~~--l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~ 79 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GWAQFLKQ--LPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIA 79 (206)
T ss_pred eEEEEEEecCCCCCc-cHHHHHHc--CCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHH
Confidence 458999999999984 78654443 444678888874332 11 11221 12344566778888
Q ss_pred HHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 172 YFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 172 ~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
.+|+.-. ..|.+.++|.+-|+|+||.+|.|++..++. ++.+.++-+-.
T Consensus 80 ~Li~~e~-~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~ 128 (206)
T KOG2112|consen 80 NLIDNEP-ANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFL 128 (206)
T ss_pred HHHHHHH-HcCCCccceeEcccCchHHHHHHHHhccccccceeecccccc
Confidence 8888765 468899999999999999999999887764 77666654433
No 140
>KOG2624|consensus
Probab=96.68 E-value=0.0021 Score=69.33 Aligned_cols=109 Identities=19% Similarity=0.326 Sum_probs=75.0
Q ss_pred CCCceEEEEccCCCCCCchhHHH-----HHHHHhcCCCeEEEEEeCCCCCCC----chhhh------cccHHH-HHHHHH
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKE-----MRRELLKHSDWNVIVVDWAGGSLP----LYTQA------TANTRL-VGLELA 171 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~-----l~~aLL~~~d~NVI~VDw~g~~~~----~Y~~a------~~n~r~-Vg~~la 171 (531)
..+|+|++.||..++.. .|+.. +.- +|...||.|..-+-||-..+ .+... .....+ .-.+|.
T Consensus 71 ~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf-~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLP 148 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSS-SWVLNGPEQSLAF-LLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLP 148 (403)
T ss_pred CCCCcEEEeeccccccc-cceecCccccHHH-HHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHH
Confidence 78999999999988773 67543 222 34456999999998873211 11110 112223 334788
Q ss_pred HHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC---C-cceeeecCCCC
Q psy545 172 YFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE---G-LGRITGLDPAE 220 (531)
Q Consensus 172 ~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~---~-V~RItgLDPAg 220 (531)
.+|+.+.+.. ..+++|.||||.|.-+.-.+...-+ . |..+.+|.||.
T Consensus 149 A~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 149 AMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 8888877665 4699999999999988775544332 2 99999999997
No 141
>PRK10115 protease 2; Provisional
Probab=96.55 E-value=0.0093 Score=68.63 Aligned_cols=100 Identities=14% Similarity=-0.020 Sum_probs=65.9
Q ss_pred CCCCceEEEEccC-CCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC--CchhhhcccH--HHHHHHHHHHHHHHHHhc
Q psy545 107 DPKKKTKFIIHGF-IDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL--PLYTQATANT--RLVGLELAYFVNYLKDNY 181 (531)
Q Consensus 107 n~~~ptvviIHGw-~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~--~~Y~~a~~n~--r~Vg~~la~~I~~L~~~~ 181 (531)
+...|++|++||- ..+....|... ...|++ .|+.|+.++.||++. ..|..+..-. ...-+++...+++|.++-
T Consensus 442 ~~~~P~ll~~hGg~~~~~~p~f~~~-~~~l~~-rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g 519 (686)
T PRK10115 442 KGHNPLLVYGYGSYGASIDADFSFS-RLSLLD-RGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLG 519 (686)
T ss_pred CCCCCEEEEEECCCCCCCCCCccHH-HHHHHH-CCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcC
Confidence 3457999999994 33333345433 345666 599999999999764 1222221100 012346666678887654
Q ss_pred CCCCCcEEEEEechhhhhhhhhhhccC
Q psy545 182 GLNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 182 g~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
-.+++++-+.|-|.||.+++.+..+.+
T Consensus 520 ~~d~~rl~i~G~S~GG~l~~~~~~~~P 546 (686)
T PRK10115 520 YGSPSLCYGMGGSAGGMLMGVAINQRP 546 (686)
T ss_pred CCChHHeEEEEECHHHHHHHHHHhcCh
Confidence 468999999999999999997665444
No 142
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.52 E-value=0.0048 Score=67.35 Aligned_cols=106 Identities=21% Similarity=0.273 Sum_probs=58.7
Q ss_pred CCceEEEEcc--CC-CCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC----Cchhhh-cccHHHHHHHHHHHHHHHHH-
Q psy545 109 KKKTKFIIHG--FI-DTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL----PLYTQA-TANTRLVGLELAYFVNYLKD- 179 (531)
Q Consensus 109 ~~ptvviIHG--w~-~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~----~~Y~~a-~~n~r~Vg~~la~~I~~L~~- 179 (531)
..|++|+||| |. ++....... - ..++...++-||.+.+|-+.. .....+ ..|.-.. +....|+|+++
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~-~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~--Dq~~AL~WV~~n 199 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYD-G-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLL--DQRLALKWVQDN 199 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGH-T-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHH--HHHHHHHHHHHH
T ss_pred ccceEEEeecccccCCCccccccc-c-cccccCCCEEEEEecccccccccccccccccCchhhhhh--hhHHHHHHHHhh
Confidence 5799999999 33 333112221 1 233444689999999996421 111112 2565443 22223566654
Q ss_pred --hcCCCCCcEEEEEechhhhhhhhhhhcc--CC-cceeeecCC
Q psy545 180 --NYGLNPADVHMIGHSLGAHTAGYAGQAI--EG-LGRITGLDP 218 (531)
Q Consensus 180 --~~g~~~~~vhLIGHSLGAhVAg~ag~~~--~~-V~RItgLDP 218 (531)
.+|-++++|+|.|||.||..+++..... .+ ..|.+....
T Consensus 200 I~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 200 IAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 5788999999999999999887533222 34 778777654
No 143
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=96.48 E-value=0.016 Score=54.97 Aligned_cols=104 Identities=18% Similarity=0.240 Sum_probs=69.3
Q ss_pred CCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC-------CchhhhcccHHHHHHHHHHHHHHHH
Q psy545 106 FDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL-------PLYTQATANTRLVGLELAYFVNYLK 178 (531)
Q Consensus 106 fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~-------~~Y~~a~~n~r~Vg~~la~~I~~L~ 178 (531)
+++-.-|+|+.||-+++.++..+..++.+|. +.|+.|.-.+++..+. ++-.+...|-. .-..++++-.
T Consensus 10 ag~~~~tilLaHGAGasmdSt~m~~~a~~la-~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~-~~~~~aql~~--- 84 (213)
T COG3571 10 AGPAPVTILLAHGAGASMDSTSMTAVAAALA-RRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPE-YIVAIAQLRA--- 84 (213)
T ss_pred CCCCCEEEEEecCCCCCCCCHHHHHHHHHHH-hCceeEEEeecchhhhccccCCCCcCccccCCHH-HHHHHHHHHh---
Confidence 4445558999999999988888888877665 5699999999875432 22122222322 1223333332
Q ss_pred HhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecC
Q psy545 179 DNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLD 217 (531)
Q Consensus 179 ~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLD 217 (531)
++.-....+=||||||.+|.+++..+.- |..++-|.
T Consensus 85 ---~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clg 121 (213)
T COG3571 85 ---GLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLG 121 (213)
T ss_pred ---cccCCceeeccccccchHHHHHHHhhcCCcceEEEec
Confidence 2344578999999999999988776654 77777764
No 144
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.47 E-value=0.019 Score=55.34 Aligned_cols=114 Identities=22% Similarity=0.246 Sum_probs=74.3
Q ss_pred CCCCceEEEEccCCCCCCc---hhH---HHHHHHHhc-----CCCeEEEEEeCCCCCCC-c-hhhh--cccHHHHHHHHH
Q psy545 107 DPKKKTKFIIHGFIDTPLS---SWV---KEMRRELLK-----HSDWNVIVVDWAGGSLP-L-YTQA--TANTRLVGLELA 171 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~---~w~---~~l~~aLL~-----~~d~NVI~VDw~g~~~~-~-Y~~a--~~n~r~Vg~~la 171 (531)
+....+.+++.|-..+... .|. ..|..++.. ..+-.|-+|-|.++-.+ . ...+ ....+.-+..|+
T Consensus 16 d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~ 95 (177)
T PF06259_consen 16 DTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLA 95 (177)
T ss_pred CCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHH
Confidence 4455678889997665432 222 122222211 12457888899876544 1 1111 223466788999
Q ss_pred HHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCCC
Q psy545 172 YFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAEP 221 (531)
Q Consensus 172 ~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAgP 221 (531)
.|++.|.... .+...+++||||.|+-++|+|.+.... +..|+.+...|-
T Consensus 96 ~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 96 RFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 9999986544 356799999999999999999888433 889988876554
No 145
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.40 E-value=0.013 Score=64.48 Aligned_cols=67 Identities=22% Similarity=0.250 Sum_probs=46.0
Q ss_pred CeEEEEEeCC-CCCCC--chhhhcccHHHHHHHHHHHHHHHHHhc-CCCCCcEEEEEechhhhhhhhhhhc
Q psy545 140 DWNVIVVDWA-GGSLP--LYTQATANTRLVGLELAYFVNYLKDNY-GLNPADVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 140 d~NVI~VDw~-g~~~~--~Y~~a~~n~r~Vg~~la~~I~~L~~~~-g~~~~~vhLIGHSLGAhVAg~ag~~ 206 (531)
..|||.+|.+ |.|.+ .-.....+...+++++.++|+.+.+.+ .+...+++|+|||+|||.+-.++.+
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 4799999987 33322 111123456788899999888665443 2345899999999999988655544
No 146
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=96.39 E-value=0.019 Score=59.72 Aligned_cols=106 Identities=19% Similarity=0.270 Sum_probs=63.2
Q ss_pred CCceEEEEccCCCCCC-chhHHHHHHHHhcCCCeEEEEEeCCC-CCCCchhhhcccHHHHHHHHHHHHHHHHHhcC--CC
Q psy545 109 KKKTKFIIHGFIDTPL-SSWVKEMRRELLKHSDWNVIVVDWAG-GSLPLYTQATANTRLVGLELAYFVNYLKDNYG--LN 184 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~-~~w~~~l~~aLL~~~d~NVI~VDw~g-~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g--~~ 184 (531)
....+|+|-|.++.-. ..++..|+++| ...++.|+-+-++. +..-. ......=+++|+++|++|....+ ..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL-~~~~wsl~q~~LsSSy~G~G----~~SL~~D~~eI~~~v~ylr~~~~g~~~ 106 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEAL-EETGWSLFQVQLSSSYSGWG----TSSLDRDVEEIAQLVEYLRSEKGGHFG 106 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHH-T-TT-EEEEE--GGGBTTS-----S--HHHHHHHHHHHHHHHHHHS-----
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHh-ccCCeEEEEEEecCccCCcC----cchhhhHHHHHHHHHHHHHHhhccccC
Confidence 4557999999998754 57889998877 44589999998874 21111 11233335788888998876542 36
Q ss_pred CCcEEEEEechhhhhhhh-hhhccC-----CcceeeecCCC
Q psy545 185 PADVHMIGHSLGAHTAGY-AGQAIE-----GLGRITGLDPA 219 (531)
Q Consensus 185 ~~~vhLIGHSLGAhVAg~-ag~~~~-----~V~RItgLDPA 219 (531)
.++|.|+|||-|.+-+.+ +.+... .|.+++.-.|.
T Consensus 107 ~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 107 REKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp -S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred CccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 799999999999998874 443322 27777776554
No 147
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.33 E-value=0.02 Score=55.74 Aligned_cols=108 Identities=19% Similarity=0.233 Sum_probs=69.8
Q ss_pred CCCCceEEEEcc---CCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCC--chhhhcccHHHHHHHHHHHHHHHHHhc
Q psy545 107 DPKKKTKFIIHG---FIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLP--LYTQATANTRLVGLELAYFVNYLKDNY 181 (531)
Q Consensus 107 n~~~ptvviIHG---w~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~--~Y~~a~~n~r~Vg~~la~~I~~L~~~~ 181 (531)
.+..|..|+.|= ++++....-+..+..+|. ..|+.++-+|+++-|.+ .|....- ++ ++.+..++||+...
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~-~~G~atlRfNfRgVG~S~G~fD~GiG---E~-~Da~aaldW~~~~h 99 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALV-KRGFATLRFNFRGVGRSQGEFDNGIG---EL-EDAAAALDWLQARH 99 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHH-hCCceEEeecccccccccCcccCCcc---hH-HHHHHHHHHHHhhC
Confidence 356788888887 556665455666665554 46999999999985542 3332222 22 35566688887643
Q ss_pred CCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 182 GLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 182 g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
- +....-|+|+|.||.||+.++.+.+. ..-|..+-|..
T Consensus 100 p-~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~ 138 (210)
T COG2945 100 P-DSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPIN 138 (210)
T ss_pred C-CchhhhhcccchHHHHHHHHHHhcccccceeeccCCCC
Confidence 2 22334789999999999998887754 33444444443
No 148
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.30 E-value=0.018 Score=61.02 Aligned_cols=97 Identities=24% Similarity=0.290 Sum_probs=62.1
Q ss_pred CCCceEEEEccCCCCCC-chhHHHHHHHHhcCCCeEEEEEeCCCCC--C--Cchhh----hcccHHHHHHHHHHHHHHHH
Q psy545 108 PKKKTKFIIHGFIDTPL-SSWVKEMRRELLKHSDWNVIVVDWAGGS--L--PLYTQ----ATANTRLVGLELAYFVNYLK 178 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~-~~w~~~l~~aLL~~~d~NVI~VDw~g~~--~--~~Y~~----a~~n~r~Vg~~la~~I~~L~ 178 (531)
...|.+++-||.+++.. -.| +.+.+.+ .||-|.++|.++-. . ..|.. +..-...--.++..+|+.|.
T Consensus 69 ~~~PlvvlshG~Gs~~~~f~~---~A~~lAs-~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~ 144 (365)
T COG4188 69 YLLPLVVLSHGSGSYVTGFAW---LAEHLAS-YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALL 144 (365)
T ss_pred CcCCeEEecCCCCCCccchhh---hHHHHhh-CceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHH
Confidence 46789999999998853 244 3454544 58999999998731 1 11211 10011122346666676665
Q ss_pred Hh-----c--CCCCCcEEEEEechhhhhhhh-hhhccC
Q psy545 179 DN-----Y--GLNPADVHMIGHSLGAHTAGY-AGQAIE 208 (531)
Q Consensus 179 ~~-----~--g~~~~~vhLIGHSLGAhVAg~-ag~~~~ 208 (531)
+. . .++..+|-++|||+||+.+.. +|.+..
T Consensus 145 ~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 145 QLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred HhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 44 1 357799999999999999986 565543
No 149
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=96.30 E-value=0.0088 Score=63.80 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=55.5
Q ss_pred CCCCceEEEEccCCCCCC----------------chhHHHHHHHHhcCCCeEEEEEeCCCCCC---C-------ch--hh
Q psy545 107 DPKKKTKFIIHGFIDTPL----------------SSWVKEMRRELLKHSDWNVIVVDWAGGSL---P-------LY--TQ 158 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~----------------~~w~~~l~~aLL~~~d~NVI~VDw~g~~~---~-------~Y--~~ 158 (531)
...-|.||.+||-.+... ..+...+...|. +.||-|+++|-.+.|. . .| ..
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA-k~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~ 190 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLA-KRGYVVLAPDALGFGERGDMEGAAQGSNYDCQA 190 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHH-TTTSEEEEE--TTSGGG-SSCCCTTTTS--HHH
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHH-hCCCEEEEEccccccccccccccccccchhHHH
Confidence 345678899998543210 112234555554 5699999999987652 1 11 11
Q ss_pred hcccHHHHHH--------HHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCCc
Q psy545 159 ATANTRLVGL--------ELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEGL 210 (531)
Q Consensus 159 a~~n~r~Vg~--------~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V 210 (531)
-+.|.-..|. +.-..+++|...-.++.++|-++||||||+.+.+++..-+.|
T Consensus 191 la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdRI 250 (390)
T PF12715_consen 191 LARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDRI 250 (390)
T ss_dssp HHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT-
T ss_pred HHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchhh
Confidence 1122222222 333345666555567889999999999999999887765544
No 150
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.27 E-value=0.02 Score=61.14 Aligned_cols=102 Identities=21% Similarity=0.317 Sum_probs=63.0
Q ss_pred CCC-CCceEEEEcc--C-CCCCC--chhHHHHHHHHhcCCCeEEEEEeCCCCC----CCchhhhcccHHHHHHHHHHHHH
Q psy545 106 FDP-KKKTKFIIHG--F-IDTPL--SSWVKEMRRELLKHSDWNVIVVDWAGGS----LPLYTQATANTRLVGLELAYFVN 175 (531)
Q Consensus 106 fn~-~~ptvviIHG--w-~~s~~--~~w~~~l~~aLL~~~d~NVI~VDw~g~~----~~~Y~~a~~n~r~Vg~~la~~I~ 175 (531)
+++ +.|.+|++|| | .+... -.++..+.. ++ ++..++++|+.-.. ...|+.. -.++.+..+
T Consensus 117 ~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~-~l--~~~SILvLDYsLt~~~~~~~~yPtQ-------L~qlv~~Y~ 186 (374)
T PF10340_consen 117 FKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYK-LL--PEVSILVLDYSLTSSDEHGHKYPTQ-------LRQLVATYD 186 (374)
T ss_pred cCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHH-Hc--CCCeEEEEeccccccccCCCcCchH-------HHHHHHHHH
Confidence 555 4799999999 2 23221 122333333 23 36799999998655 2345432 235555567
Q ss_pred HHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC------cceeeecCCC
Q psy545 176 YLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG------LGRITGLDPA 219 (531)
Q Consensus 176 ~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~------V~RItgLDPA 219 (531)
.|.+..| .++|+|+|=|.|||+|.-..+++.. -.+++.+-|-
T Consensus 187 ~Lv~~~G--~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPW 234 (374)
T PF10340_consen 187 YLVESEG--NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPW 234 (374)
T ss_pred HHHhccC--CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCC
Confidence 7764444 5899999999999999765554432 3455566554
No 151
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.07 E-value=0.02 Score=61.45 Aligned_cols=80 Identities=19% Similarity=0.224 Sum_probs=52.7
Q ss_pred HHHHHHHHhcC---CCeEEEE--EeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhh
Q psy545 128 VKEMRRELLKH---SDWNVIV--VDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGY 202 (531)
Q Consensus 128 ~~~l~~aLL~~---~d~NVI~--VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ 202 (531)
...|++.|.+. .+.++.+ .|||.... ........|..+|+.+.+. .-++|+||||||||.++.+
T Consensus 67 ~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~--------~~~~~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 67 FAKLIENLEKLGYDRGKDLFAAPYDWRLSPA--------ERDEYFTKLKQLIEEAYKK---NGKKVVLIAHSMGGLVARY 135 (389)
T ss_pred HHHHHHHHHhcCcccCCEEEEEeechhhchh--------hHHHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCchHHHH
Confidence 34566666542 2444444 59986432 1223456778888876543 3689999999999999987
Q ss_pred hhhccC------C-cceeeecCC
Q psy545 203 AGQAIE------G-LGRITGLDP 218 (531)
Q Consensus 203 ag~~~~------~-V~RItgLDP 218 (531)
+-+... . |.+++.|.+
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~ 158 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGT 158 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCC
Confidence 554431 2 999998854
No 152
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=96.03 E-value=0.079 Score=47.53 Aligned_cols=79 Identities=13% Similarity=0.185 Sum_probs=55.7
Q ss_pred eeEEEEEEcCCC-CCccceeeeEEEEEEeCCCceeeeecCCCCcccccCCceEEEEEeccCCCCceeEEEEEEEecCCcc
Q psy545 380 HYRITLDLARPP-RAETWVQGFMRVSLHSDNGVIRNLDLTPNGYEKLEHGTSRSFVVTHPEDVGTINKVEFYWEYDMDVL 458 (531)
Q Consensus 380 ~y~v~i~~~~~~-~~~~~~~g~~~i~L~g~~g~~~~~~~~~~~~~~~~~~~~~s~l~~~~~dig~~~~v~l~w~~~~~~~ 458 (531)
-|+|+|.+.... .+ -+...+.|+|+|++|++....|... .+.+-+. ..++|+|++|++ |..+ .-.
T Consensus 2 ~Y~VtV~TG~~~~gA--GT~anV~i~L~G~~g~s~~~~L~~~---------~f~~~v~-~~~LG~L~~irI-wHDn-sG~ 67 (114)
T cd01757 2 PYHVVIVPSKKLGGS--MFTANPWICVSGELGETPPLQIPKN---------SLEMTFD-CQNLGKLTTVQI-GHDN-SGL 67 (114)
T ss_pred eEEEEEEeCCCCCCC--CCcceEEEEEEEcCCCcCCEEecCC---------ceEEEEe-cCCcCCcEEEEE-EECC-CCC
Confidence 389999988752 33 3557899999999999877777522 2233333 379999999999 7755 222
Q ss_pred CCceecccccCCcEEEEEEEEeec
Q psy545 459 QPRSLCFLWCNDHLYVSSIKVTET 482 (531)
Q Consensus 459 ~p~~w~~~w~~~~~~i~~i~v~~~ 482 (531)
.| .-++++|.|+.+
T Consensus 68 ~~----------~Wfl~~V~V~d~ 81 (114)
T cd01757 68 LA----------KWLVEYVMVRNE 81 (114)
T ss_pred CC----------CeeeeEEEEEeC
Confidence 22 346899999976
No 153
>COG4099 Predicted peptidase [General function prediction only]
Probab=96.01 E-value=0.045 Score=56.62 Aligned_cols=94 Identities=13% Similarity=0.101 Sum_probs=55.4
Q ss_pred CceEEEEccCCCCCCchhHHHHHH---HH--h-cCCCeEEEEEeCCC-CCCCchhhhcccHHHHHHHHHHHHH-HHHHhc
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRR---EL--L-KHSDWNVIVVDWAG-GSLPLYTQATANTRLVGLELAYFVN-YLKDNY 181 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~---aL--L-~~~d~NVI~VDw~g-~~~~~Y~~a~~n~r~Vg~~la~~I~-~L~~~~ 181 (531)
-|.++++||-+..++.... .+.. ++ + -..++=|+++-|.. .+. ...++...-..+-++|+ .|.+.+
T Consensus 191 ~PLvlfLHgagq~g~dn~~-~l~sg~gaiawa~pedqcfVlAPQy~~if~d-----~e~~t~~~l~~~idli~~vlas~y 264 (387)
T COG4099 191 YPLVLFLHGAGQGGSDNDK-VLSSGIGAIAWAGPEDQCFVLAPQYNPIFAD-----SEEKTLLYLIEKIDLILEVLASTY 264 (387)
T ss_pred ccEEEEEecCCCCCchhhh-hhhcCccceeeecccCceEEEcccccccccc-----cccccchhHHHHHHHHHHHHhhcc
Confidence 4899999998877753221 1110 00 0 01123455555543 111 11122222233344454 677788
Q ss_pred CCCCCcEEEEEechhhhhhhhhhhccCC
Q psy545 182 GLNPADVHMIGHSLGAHTAGYAGQAIEG 209 (531)
Q Consensus 182 g~~~~~vhLIGHSLGAhVAg~ag~~~~~ 209 (531)
.++.++|++||.|+||.-+.++...++.
T Consensus 265 nID~sRIYviGlSrG~~gt~al~~kfPd 292 (387)
T COG4099 265 NIDRSRIYVIGLSRGGFGTWALAEKFPD 292 (387)
T ss_pred CcccceEEEEeecCcchhhHHHHHhCch
Confidence 8999999999999999999888777664
No 154
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.98 E-value=0.041 Score=51.24 Aligned_cols=84 Identities=17% Similarity=0.124 Sum_probs=51.1
Q ss_pred HHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC-
Q psy545 130 EMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE- 208 (531)
Q Consensus 130 ~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~- 208 (531)
.+...+ . .++.|+++|.++.+...- ........+..+ ++.+.... ...+++++|||+||.+|..++..+.
T Consensus 17 ~~~~~l-~-~~~~v~~~~~~g~~~~~~--~~~~~~~~~~~~---~~~l~~~~--~~~~~~l~g~s~Gg~~a~~~a~~l~~ 87 (212)
T smart00824 17 RLAAAL-R-GRRDVSALPLPGFGPGEP--LPASADALVEAQ---AEAVLRAA--GGRPFVLVGHSSGGLLAHAVAARLEA 87 (212)
T ss_pred HHHHhc-C-CCccEEEecCCCCCCCCC--CCCCHHHHHHHH---HHHHHHhc--CCCCeEEEEECHHHHHHHHHHHHHHh
Confidence 344433 3 368999999998754211 111222233333 33332222 3467999999999999987666542
Q ss_pred -C--cceeeecCCCCCc
Q psy545 209 -G--LGRITGLDPAEPY 222 (531)
Q Consensus 209 -~--V~RItgLDPAgP~ 222 (531)
+ +..++.+|+..|.
T Consensus 88 ~~~~~~~l~~~~~~~~~ 104 (212)
T smart00824 88 RGIPPAAVVLLDTYPPG 104 (212)
T ss_pred CCCCCcEEEEEccCCCC
Confidence 2 7888888876654
No 155
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=95.87 E-value=0.091 Score=54.87 Aligned_cols=131 Identities=18% Similarity=0.263 Sum_probs=80.2
Q ss_pred CCCceeecCCccccc---ccCCCCCCceEEEEccCCCCCC-chhHHHHHHHHhcCCCeEEEEEeCCCCC---CCch----
Q psy545 88 TEGHMLKVQNERTIE---KSNFDPKKKTKFIIHGFIDTPL-SSWVKEMRRELLKHSDWNVIVVDWAGGS---LPLY---- 156 (531)
Q Consensus 88 ~~~~~l~~~~~~~i~---~s~fn~~~ptvviIHGw~~s~~-~~w~~~l~~aLL~~~d~NVI~VDw~g~~---~~~Y---- 156 (531)
++.+.|..++...+. ...-...+-.+||||||..+.+ ..-+..|+..|-+ .|++.+++-.+.-. .+..
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~-~GW~Tlsit~P~~~~~~~p~~~~~~ 140 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPD-HGWATLSITLPDPAPPASPNRATEA 140 (310)
T ss_pred hhcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhh-cCceEEEecCCCcccccCCccCCCC
Confidence 344555554433221 2222334558999999998874 2446667776644 69999998887611 0000
Q ss_pred -----------hh---------------hcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhh-hhhhccCC
Q psy545 157 -----------TQ---------------ATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAG-YAGQAIEG 209 (531)
Q Consensus 157 -----------~~---------------a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg-~ag~~~~~ 209 (531)
.. ...+...+-+.|...+..+.+. ...++.||||+.||..+. ++.....-
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 141 EEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred CCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCc
Confidence 00 0012234555666667766542 346799999999999887 55554433
Q ss_pred -cceeeecCCCCCc
Q psy545 210 -LGRITGLDPAEPY 222 (531)
Q Consensus 210 -V~RItgLDPAgP~ 222 (531)
+..++.++|-.|-
T Consensus 218 ~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 218 MPDALVLINAYWPQ 231 (310)
T ss_pred ccCeEEEEeCCCCc
Confidence 8999999987664
No 156
>KOG3724|consensus
Probab=95.82 E-value=0.07 Score=61.15 Aligned_cols=129 Identities=17% Similarity=0.225 Sum_probs=70.1
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHh---------------cCCCeEEEEEeCCCCCCCchhhh-cccHHHHHHHH
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELL---------------KHSDWNVIVVDWAGGSLPLYTQA-TANTRLVGLEL 170 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL---------------~~~d~NVI~VDw~g~~~~~Y~~a-~~n~r~Vg~~l 170 (531)
..++=+|++|-|=.|+... ++.++..-. ....+..++||..+-=..-+.+. ...++.|-+.|
T Consensus 86 elsGIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred cCCCceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhHHHHHHHHHHHH
Confidence 4456679999999888641 222322211 11346788888876311111111 12234444455
Q ss_pred HHHHHHHHHhcCCC---CCcEEEEEechhhhhhhhhhhc---cCC-cceeeecCCCCCccCCCCCCCCCCccchhhhHH
Q psy545 171 AYFVNYLKDNYGLN---PADVHMIGHSLGAHTAGYAGQA---IEG-LGRITGLDPAEPYFQGMPPFARLDPTDADLVDV 242 (531)
Q Consensus 171 a~~I~~L~~~~g~~---~~~vhLIGHSLGAhVAg~ag~~---~~~-V~RItgLDPAgP~F~~~~~~~rLd~sDA~fVDv 242 (531)
...+.....+...+ +..|.||||||||.||..+..+ .++ |.-|+.+. .|.- .+...+|+.--+|-..
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls--sPH~---a~Pl~~D~~l~~fy~~ 237 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS--SPHA---APPLPLDRFLLRFYLL 237 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc--Cccc---CCCCCCcHHHHHHHHH
Confidence 44443332211223 7889999999999999876543 345 88777663 3331 2234466654444443
No 157
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.80 E-value=0.021 Score=58.63 Aligned_cols=102 Identities=19% Similarity=0.129 Sum_probs=47.8
Q ss_pred CceEEEEccCCCCCC-c-hh--HHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCC
Q psy545 110 KKTKFIIHGFIDTPL-S-SW--VKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 110 ~ptvviIHGw~~s~~-~-~w--~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~ 185 (531)
..++||.||.+++.. . .+ +..+++.. .+|.-|.+|+.......+-..+ -...+-+++..+.+.|...-.+ .
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~--~PG~yV~si~ig~~~~~D~~~s--~f~~v~~Qv~~vc~~l~~~p~L-~ 79 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQ--HPGTYVHSIEIGNDPSEDVENS--FFGNVNDQVEQVCEQLANDPEL-A 79 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHH--STT--EEE--SSSSHHHHHHHH--HHSHHHHHHHHHHHHHHH-GGG-T
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHh--CCCceEEEEEECCCcchhhhhh--HHHHHHHHHHHHHHHHhhChhh-h
Confidence 346899999998752 1 21 23333333 3688899998865421110000 0112233444334444322111 2
Q ss_pred CcEEEEEechhhhhhhhhhhccCC--cceeeec
Q psy545 186 ADVHMIGHSLGAHTAGYAGQAIEG--LGRITGL 216 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~ag~~~~~--V~RItgL 216 (531)
+-+|+||||-||.++-.+..+.++ |..++.|
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISl 112 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISL 112 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEE
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEe
Confidence 679999999999999777666654 7776666
No 158
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=95.77 E-value=0.038 Score=59.77 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=62.0
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEE
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVH 189 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vh 189 (531)
+|+++||-=+.+.. ......+++.|+. |+.|.++||......+......+.......|.++|+.+ | .+ +|
T Consensus 102 ~~pvLiV~Pl~g~~-~~L~RS~V~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G--~~-v~ 171 (406)
T TIGR01849 102 GPAVLIVAPMSGHY-ATLLRSTVEALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----G--PD-IH 171 (406)
T ss_pred CCcEEEEcCCchHH-HHHHHHHHHHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----C--CC-Cc
Confidence 36888888877544 2335677888885 89999999987664433333334333333454444433 3 34 99
Q ss_pred EEEechhhhhhhhhhhcc-----C-Ccceeeec
Q psy545 190 MIGHSLGAHTAGYAGQAI-----E-GLGRITGL 216 (531)
Q Consensus 190 LIGHSLGAhVAg~ag~~~-----~-~V~RItgL 216 (531)
|+|+++||-.+..+.... + .+..+|.+
T Consensus 172 l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm 204 (406)
T TIGR01849 172 VIAVCQPAVPVLAAVALMAENEPPAQPRSMTLM 204 (406)
T ss_pred EEEEchhhHHHHHHHHHHHhcCCCCCcceEEEE
Confidence 999999999876443332 2 27777765
No 159
>KOG3101|consensus
Probab=95.71 E-value=0.018 Score=56.85 Aligned_cols=110 Identities=18% Similarity=0.267 Sum_probs=63.3
Q ss_pred CCceEEEEccCCCCCCchhHHHH-HHHHhcCCCeEEEEEeCCCCCC---------------Cchhhh-----cccHHHHH
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEM-RRELLKHSDWNVIVVDWAGGSL---------------PLYTQA-----TANTRLVG 167 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l-~~aLL~~~d~NVI~VDw~g~~~---------------~~Y~~a-----~~n~r~Vg 167 (531)
.-|+++++-|.+-+.. +++..- .+...++.+.-|+.+|-+..|. .-|..| ..+.|...
T Consensus 43 ~~P~lf~LSGLTCT~~-Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYd 121 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHE-NFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYD 121 (283)
T ss_pred cCceEEEecCCcccch-hhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHH
Confidence 3588999999987763 333211 1112234578888888654321 123222 22344444
Q ss_pred HHHHHHHHHHH-HhcCCCCCcEEEEEechhhhhhhhhhhccC-CcceeeecCCC
Q psy545 168 LELAYFVNYLK-DNYGLNPADVHMIGHSLGAHTAGYAGQAIE-GLGRITGLDPA 219 (531)
Q Consensus 168 ~~la~~I~~L~-~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~-~V~RItgLDPA 219 (531)
-.+.++.+.|. ....+++.++-|.|||||||=|...+..-+ .-..+.+..|.
T Consensus 122 Yv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 122 YVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 44444444443 234567889999999999998886544333 35666666553
No 160
>PLN02606 palmitoyl-protein thioesterase
Probab=95.60 E-value=0.055 Score=56.28 Aligned_cols=89 Identities=16% Similarity=0.129 Sum_probs=46.6
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhc-CCCeEEEEEeCCCCCCCch-hhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLK-HSDWNVIVVDWAGGSLPLY-TQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~-~~d~NVI~VDw~g~~~~~Y-~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
..++|+.||.+++....-+..+.+ +++ ..+.-+..|-....-...| ... -+++..+.+.|.....+ .+-
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~-~i~~~~~~pg~~v~ig~~~~~s~~~~~-------~~Qv~~vce~l~~~~~L-~~G 96 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQ-FLINHSGYPGTCVEIGNGVQDSLFMPL-------RQQASIACEKIKQMKEL-SEG 96 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHH-HHHhCCCCCeEEEEECCCcccccccCH-------HHHHHHHHHHHhcchhh-cCc
Confidence 345889999998765433455554 333 2244444443222111112 222 23333333333221111 246
Q ss_pred EEEEEechhhhhhhhhhhcc
Q psy545 188 VHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 188 vhLIGHSLGAhVAg~ag~~~ 207 (531)
+|+||||-||.++-.+.++.
T Consensus 97 ~naIGfSQGglflRa~ierc 116 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFC 116 (306)
T ss_pred eEEEEEcchhHHHHHHHHHC
Confidence 99999999999997655554
No 161
>KOG2565|consensus
Probab=95.50 E-value=0.015 Score=61.56 Aligned_cols=91 Identities=16% Similarity=0.161 Sum_probs=61.2
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCC---------CeEEEEEeCCCCCCCchh-hhcccHHHHHHHHHHHHHHHH
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHS---------DWNVIVVDWAGGSLPLYT-QATANTRLVGLELAYFVNYLK 178 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~---------d~NVI~VDw~g~~~~~Y~-~a~~n~r~Vg~~la~~I~~L~ 178 (531)
.-.+++++|||.++-.+ +.++++ ||... -+.||++..+|.+-+.-+ ....|. .++|.+++.|+
T Consensus 151 ~v~PlLl~HGwPGsv~E--FykfIP-lLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~----~a~ArvmrkLM 223 (469)
T KOG2565|consen 151 KVKPLLLLHGWPGSVRE--FYKFIP-LLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNA----AATARVMRKLM 223 (469)
T ss_pred cccceEEecCCCchHHH--HHhhhh-hhcCccccCCccceeEEEeccCCCCcccCcCCccCCccH----HHHHHHHHHHH
Confidence 34468999999998642 234555 44332 278999999998754321 123343 34555555555
Q ss_pred HhcCCCCCcEEEEEechhhhhhhhhhhccC
Q psy545 179 DNYGLNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 179 ~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
-. +..+++.|-|--.|+-|+..++..++
T Consensus 224 lR--Lg~nkffiqGgDwGSiI~snlasLyP 251 (469)
T KOG2565|consen 224 LR--LGYNKFFIQGGDWGSIIGSNLASLYP 251 (469)
T ss_pred HH--hCcceeEeecCchHHHHHHHHHhhcc
Confidence 33 35789999999999999998887766
No 162
>KOG2541|consensus
Probab=95.38 E-value=0.23 Score=50.79 Aligned_cols=99 Identities=14% Similarity=0.024 Sum_probs=62.5
Q ss_pred ceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEE
Q psy545 111 KTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHM 190 (531)
Q Consensus 111 ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhL 190 (531)
.++|+.||..++....-+..+.+.+-+..|.-|.++|...+-...+ -.+...-+..+-+.|..+.+ -.+-+++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~---l~pl~~Qv~~~ce~v~~m~~----lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSS---LMPLWEQVDVACEKVKQMPE----LSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcchhh---hccHHHHHHHHHHHHhcchh----ccCceEE
Confidence 5688899999887532244444444445789999999876622111 12233333333333443321 3577999
Q ss_pred EEechhhhhhhhhhhccCC--cceeeec
Q psy545 191 IGHSLGAHTAGYAGQAIEG--LGRITGL 216 (531)
Q Consensus 191 IGHSLGAhVAg~ag~~~~~--V~RItgL 216 (531)
||+|-||.+|-.+.+..++ |...+-|
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL 124 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISL 124 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEec
Confidence 9999999999888887765 6665555
No 163
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.37 E-value=0.066 Score=51.44 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=46.4
Q ss_pred eEEEEccCCCCCCchhHH-HHHHHHh---cCCCeEEEEEeCCCCCCC-chhhhcccHHHHHHHHHHHHHHHHHhcCCCCC
Q psy545 112 TKFIIHGFIDTPLSSWVK-EMRRELL---KHSDWNVIVVDWAGGSLP-LYTQATANTRLVGLELAYFVNYLKDNYGLNPA 186 (531)
Q Consensus 112 tvviIHGw~~s~~~~w~~-~l~~aLL---~~~d~NVI~VDw~g~~~~-~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~ 186 (531)
.+|+..|-+......++- .+.+++- ......|..|+|+..... .|..++ ..=...+...|+...... +..
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~---~~G~~~~~~~i~~~~~~C--P~~ 81 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSV---AAGVANLVRLIEEYAARC--PNT 81 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHH---HHHHHHHHHHHHHHHHHS--TTS
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccH---HHHHHHHHHHHHHHHHhC--CCC
Confidence 366677766543222222 2222332 223467777888765443 454433 222334555555544443 567
Q ss_pred cEEEEEechhhhhhhhhhhc
Q psy545 187 DVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 187 ~vhLIGHSLGAhVAg~ag~~ 206 (531)
++.|+|||.||+|++.+...
T Consensus 82 kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 82 KIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp EEEEEEETHHHHHHHHHHHH
T ss_pred CEEEEecccccHHHHHHHHh
Confidence 99999999999999976555
No 164
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.34 E-value=0.025 Score=50.72 Aligned_cols=40 Identities=23% Similarity=0.304 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhcc
Q psy545 166 VGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 166 Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
....+.+.|..+.++.. ..+|.+.||||||.+|..++..+
T Consensus 46 ~~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhh
Confidence 33455555555554443 58999999999999999877654
No 165
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.32 E-value=0.025 Score=56.42 Aligned_cols=69 Identities=23% Similarity=0.396 Sum_probs=43.1
Q ss_pred HHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC-----CcceeeecCCCCCccCCCCCCCCCCccchhhhHHhhhc
Q psy545 172 YFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE-----GLGRITGLDPAEPYFQGMPPFARLDPTDADLVDVIHTD 246 (531)
Q Consensus 172 ~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~-----~V~RItgLDPAgP~F~~~~~~~rLd~sDA~fVDvIHTd 246 (531)
.+++.+.+.. ..++.|.|||+||.+|.||+.... .|.++...|. |.|...- .-++......+-||+-
T Consensus 73 ~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg--PGf~~~~---~~~~~~~~~~~kI~~~ 144 (224)
T PF11187_consen 73 AYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG--PGFSEEF---LESPGYQRIKDKIHNY 144 (224)
T ss_pred HHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC--CCCChhh---cccHhHHHHhhhhEEE
Confidence 3445554432 346999999999999999887753 3788888886 5554311 1123334555666654
Q ss_pred CC
Q psy545 247 GS 248 (531)
Q Consensus 247 ~~ 248 (531)
..
T Consensus 145 vp 146 (224)
T PF11187_consen 145 VP 146 (224)
T ss_pred cC
Confidence 43
No 166
>COG3150 Predicted esterase [General function prediction only]
Probab=95.29 E-value=0.06 Score=51.47 Aligned_cols=94 Identities=23% Similarity=0.328 Sum_probs=52.7
Q ss_pred EEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEE
Q psy545 113 KFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIG 192 (531)
Q Consensus 113 vviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIG 192 (531)
+++||||.+|..+ .-..+...+++. .|-.+.++--..+.++ +...++|-.+|..+ + -++.-|+|
T Consensus 2 ilYlHGFnSSP~s-hka~l~~q~~~~---~~~~i~y~~p~l~h~p------~~a~~ele~~i~~~----~--~~~p~ivG 65 (191)
T COG3150 2 ILYLHGFNSSPGS-HKAVLLLQFIDE---DVRDIEYSTPHLPHDP------QQALKELEKAVQEL----G--DESPLIVG 65 (191)
T ss_pred eEEEecCCCCccc-HHHHHHHHHHhc---cccceeeecCCCCCCH------HHHHHHHHHHHHHc----C--CCCceEEe
Confidence 7899999998743 233333444432 2223333322223343 23334444444432 2 34589999
Q ss_pred echhhhhhhhhhhccCCcceeeecCCCCCccC
Q psy545 193 HSLGAHTAGYAGQAIEGLGRITGLDPAEPYFQ 224 (531)
Q Consensus 193 HSLGAhVAg~ag~~~~~V~RItgLDPAgP~F~ 224 (531)
-||||.-|-.+|.... | |-+.++||---++
T Consensus 66 ssLGGY~At~l~~~~G-i-rav~~NPav~P~e 95 (191)
T COG3150 66 SSLGGYYATWLGFLCG-I-RAVVFNPAVRPYE 95 (191)
T ss_pred ecchHHHHHHHHHHhC-C-hhhhcCCCcCchh
Confidence 9999999988887654 3 3346788753333
No 167
>KOG3847|consensus
Probab=95.21 E-value=0.072 Score=55.49 Aligned_cols=43 Identities=16% Similarity=0.141 Sum_probs=32.0
Q ss_pred CCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCC
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGS 152 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~ 152 (531)
+..-|.+|+-||.+++.. ....+.-.|.+ .|+-|.+|..|..+
T Consensus 115 ~~k~PvvvFSHGLggsRt--~YSa~c~~LAS-hG~VVaavEHRD~S 157 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRT--LYSAYCTSLAS-HGFVVAAVEHRDRS 157 (399)
T ss_pred CCCccEEEEecccccchh--hHHHHhhhHhh-CceEEEEeecccCc
Confidence 446789999999999874 33445555655 59999999988654
No 168
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.20 E-value=0.069 Score=53.58 Aligned_cols=92 Identities=15% Similarity=0.256 Sum_probs=56.6
Q ss_pred EEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhc---c-cHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 113 KFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQAT---A-NTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 113 vviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~---~-n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
.+++-|-++-.. .+.+.++. ++.+.||.|+..|++|-+.+.-.... . ...-.-.+++..|+++.+.. .--..
T Consensus 32 ~~~va~a~Gv~~-~fYRrfA~-~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~--~~~P~ 107 (281)
T COG4757 32 RLVVAGATGVGQ-YFYRRFAA-AAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL--PGHPL 107 (281)
T ss_pred cEEecccCCcch-hHhHHHHH-HhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC--CCCce
Confidence 455555444432 34555654 45567999999999997643211110 0 11112235666667775432 45678
Q ss_pred EEEEechhhhhhhhhhhccC
Q psy545 189 HMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~ 208 (531)
..||||+|||+.|.++.+..
T Consensus 108 y~vgHS~GGqa~gL~~~~~k 127 (281)
T COG4757 108 YFVGHSFGGQALGLLGQHPK 127 (281)
T ss_pred EEeeccccceeecccccCcc
Confidence 99999999999999888763
No 169
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=95.18 E-value=0.065 Score=57.80 Aligned_cols=102 Identities=24% Similarity=0.258 Sum_probs=63.7
Q ss_pred CCceEEEEccCCCCCC---chhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHH-HHHHHHHHHHHHHhcCCC
Q psy545 109 KKKTKFIIHGFIDTPL---SSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLV-GLELAYFVNYLKDNYGLN 184 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~---~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~V-g~~la~~I~~L~~~~g~~ 184 (531)
.+++++++|=|...-. ...-..++.-|++ .|..|.++||+.-. +..+..|.... -..+.+-|+.+.+..|
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~-~g~~vfvIsw~nPd---~~~~~~~~edYi~e~l~~aid~v~~itg-- 179 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLE-QGLDVFVISWRNPD---ASLAAKNLEDYILEGLSEAIDTVKDITG-- 179 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHH-cCCceEEEeccCch---HhhhhccHHHHHHHHHHHHHHHHHHHhC--
Confidence 4567899999876431 1112234444444 58999999998643 22333333322 2455556666665544
Q ss_pred CCcEEEEEechhhhhhhhhhh-ccCC-cceeeec
Q psy545 185 PADVHMIGHSLGAHTAGYAGQ-AIEG-LGRITGL 216 (531)
Q Consensus 185 ~~~vhLIGHSLGAhVAg~ag~-~~~~-V~RItgL 216 (531)
.++|++|||+.||.++..+.. +... |..+|.|
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~l 213 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLL 213 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhcccccceee
Confidence 589999999999998775444 3334 7777765
No 170
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.00 E-value=0.038 Score=56.50 Aligned_cols=105 Identities=18% Similarity=0.105 Sum_probs=72.6
Q ss_pred CCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCC-----chhhh----------------cccHHHH
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLP-----LYTQA----------------TANTRLV 166 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~-----~Y~~a----------------~~n~r~V 166 (531)
...|.||-.|||++++. .|...+ -....||.|+++|-||.+.+ .++.. ....+.|
T Consensus 81 ~~~P~vV~fhGY~g~~g-~~~~~l---~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v 156 (321)
T COG3458 81 GKLPAVVQFHGYGGRGG-EWHDML---HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGV 156 (321)
T ss_pred CccceEEEEeeccCCCC-Cccccc---cccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeee
Confidence 56889999999999874 454322 12346999999999986532 22211 1123445
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCCcceeeec
Q psy545 167 GLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEGLGRITGL 216 (531)
Q Consensus 167 g~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItgL 216 (531)
-.++...++.+..-..++.++|-+-|-|.||.+|..|+..-+.|.+....
T Consensus 157 ~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~ 206 (321)
T COG3458 157 FLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVAD 206 (321)
T ss_pred hHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhccccc
Confidence 56777777777655567889999999999999999887765555555443
No 171
>PLN02633 palmitoyl protein thioesterase family protein
Probab=95.00 E-value=0.11 Score=54.08 Aligned_cols=98 Identities=13% Similarity=0.069 Sum_probs=52.8
Q ss_pred eEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEE
Q psy545 112 TKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMI 191 (531)
Q Consensus 112 tvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLI 191 (531)
++|+-||.+++....=+..+.+.+-+..|..|.++-........|.. +. -+++..+.+.|.....+ .+-+|+|
T Consensus 27 P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~---~~---~~Qve~vce~l~~~~~l-~~G~naI 99 (314)
T PLN02633 27 PFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEIGNGVGDSWLM---PL---TQQAEIACEKVKQMKEL-SQGYNIV 99 (314)
T ss_pred CeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEECCCcccccee---CH---HHHHHHHHHHHhhchhh-hCcEEEE
Confidence 47788999998754345555543322346666666554432222221 11 23333333333221111 2469999
Q ss_pred EechhhhhhhhhhhccCC---cceeeec
Q psy545 192 GHSLGAHTAGYAGQAIEG---LGRITGL 216 (531)
Q Consensus 192 GHSLGAhVAg~ag~~~~~---V~RItgL 216 (531)
|||-||.++-.+.++.++ |..++-|
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISl 127 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISL 127 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEe
Confidence 999999999765555432 4444443
No 172
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=94.94 E-value=0.086 Score=54.42 Aligned_cols=87 Identities=22% Similarity=0.341 Sum_probs=55.8
Q ss_pred HHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHH---hcCCCC-CcEEEEEechhhhhhhhhh
Q psy545 129 KEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKD---NYGLNP-ADVHMIGHSLGAHTAGYAG 204 (531)
Q Consensus 129 ~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~---~~g~~~-~~vhLIGHSLGAhVAg~ag 204 (531)
..+...+|++ ||.|++.|+.|.+. .|..+ +.-|..+-..|+...+ ..|++. .++.|.|||-||+.+++|+
T Consensus 16 ~~~l~~~L~~-GyaVv~pDY~Glg~-~y~~~----~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 16 APFLAAWLAR-GYAVVAPDYEGLGT-PYLNG----RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHHHHHC-CCEEEecCCCCCCC-cccCc----HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 3456677764 99999999998776 56433 2334444444544332 134433 6899999999999998877
Q ss_pred hcc----CCcc-eeeecCCCCC
Q psy545 205 QAI----EGLG-RITGLDPAEP 221 (531)
Q Consensus 205 ~~~----~~V~-RItgLDPAgP 221 (531)
..- +.+. +|.|.-..+|
T Consensus 90 ~l~~~YApeL~~~l~Gaa~gg~ 111 (290)
T PF03583_consen 90 ELAPSYAPELNRDLVGAAAGGP 111 (290)
T ss_pred HHhHHhCcccccceeEEeccCC
Confidence 543 3354 4666554444
No 173
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=94.94 E-value=0.042 Score=54.07 Aligned_cols=56 Identities=23% Similarity=0.431 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCCcceeeecCCCCCccCC
Q psy545 170 LAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEGLGRITGLDPAEPYFQG 225 (531)
Q Consensus 170 la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItgLDPAgP~F~~ 225 (531)
..+.+++|.+.-.++.++|-|+|.|.||-+|..+|.+++.|..++.+.|..-.|.+
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~ 61 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQG 61 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SS
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecc
Confidence 34557888766677789999999999999999999999999999999998877765
No 174
>KOG1516|consensus
Probab=94.94 E-value=0.059 Score=59.86 Aligned_cols=92 Identities=23% Similarity=0.305 Sum_probs=51.7
Q ss_pred CceEEEEccC---CCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC----CchhhhcccHHHHHHHHHHHHHHHH---H
Q psy545 110 KKTKFIIHGF---IDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL----PLYTQATANTRLVGLELAYFVNYLK---D 179 (531)
Q Consensus 110 ~ptvviIHGw---~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~----~~Y~~a~~n~r~Vg~~la~~I~~L~---~ 179 (531)
.|++|+|||= .+++. .+.......++...+.-|+.+.+|-+.- ..-..+..|.... +....++|++ .
T Consensus 112 ~pV~V~iHGG~~~~gs~~-~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~--Dq~~AL~wv~~~I~ 188 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSAS-SFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLF--DQLLALRWVKDNIP 188 (545)
T ss_pred CCEEEEEeCCceeecccc-chhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHH--HHHHHHHHHHHHHH
Confidence 7999999992 23321 1111112233433467777777775421 1101112444433 2222244443 3
Q ss_pred hcCCCCCcEEEEEechhhhhhhhhh
Q psy545 180 NYGLNPADVHMIGHSLGAHTAGYAG 204 (531)
Q Consensus 180 ~~g~~~~~vhLIGHSLGAhVAg~ag 204 (531)
.+|-++++|+|+|||.||..+.+..
T Consensus 189 ~FGGdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 189 SFGGDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred hcCCCCCeEEEEeechhHHHHHHHh
Confidence 5788999999999999999987543
No 175
>KOG4372|consensus
Probab=94.72 E-value=0.026 Score=60.44 Aligned_cols=88 Identities=23% Similarity=0.297 Sum_probs=57.2
Q ss_pred eEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHH-HHHHhcCCCCCcEEE
Q psy545 112 TKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVN-YLKDNYGLNPADVHM 190 (531)
Q Consensus 112 tvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~-~L~~~~g~~~~~vhL 190 (531)
.+|++||..+.....|...+.+......+..++.-+..+. +.+....+..+|.-+|..+. .+. ..+.++|-.
T Consensus 82 LvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~----~~~T~~Gv~~lG~Rla~~~~e~~~---~~si~kISf 154 (405)
T KOG4372|consen 82 LVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNN----MCQTFDGVDVLGERLAEEVKETLY---DYSIEKISF 154 (405)
T ss_pred EEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccc----hhhccccceeeecccHHHHhhhhh---ccccceeee
Confidence 6999999887323578777766665556665444444432 23334445566777766533 332 235799999
Q ss_pred EEechhhhhhhhhhhc
Q psy545 191 IGHSLGAHTAGYAGQA 206 (531)
Q Consensus 191 IGHSLGAhVAg~ag~~ 206 (531)
|||||||-++-||-.+
T Consensus 155 vghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 155 VGHSLGGLVARYAIGY 170 (405)
T ss_pred eeeecCCeeeeEEEEe
Confidence 9999999999886443
No 176
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.61 E-value=0.05 Score=56.30 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=70.1
Q ss_pred CCCceEEEEcc--CCCCCCchhHHHHHHHHhcC---CCeEEEEEeCCCCCC--CchhhhcccHHHHHHHHHHHHHHHHHh
Q psy545 108 PKKKTKFIIHG--FIDTPLSSWVKEMRRELLKH---SDWNVIVVDWAGGSL--PLYTQATANTRLVGLELAYFVNYLKDN 180 (531)
Q Consensus 108 ~~~ptvviIHG--w~~s~~~~w~~~l~~aLL~~---~d~NVI~VDw~g~~~--~~Y~~a~~n~r~Vg~~la~~I~~L~~~ 180 (531)
...|.+++.|| |..++. +..+.++|+.. ....+|.||.-.-.. ..|......++.++.+|-=+|+. .
T Consensus 96 ~k~pvl~~~DG~~~~~~g~---i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~---~ 169 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGR---IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEE---R 169 (299)
T ss_pred ccccEEEEeccHHHHhcCC---hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhc---c
Confidence 35788999999 555553 34556667654 468999999865321 12333344455556555444432 3
Q ss_pred cCC--CCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 181 YGL--NPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 181 ~g~--~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
+.. ..+.-.|+|-||||-+|+++|...+. .+++....|.
T Consensus 170 yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 170 YPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred CcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 322 34667899999999999999998887 8888776554
No 177
>KOG2281|consensus
Probab=93.85 E-value=0.15 Score=57.41 Aligned_cols=155 Identities=14% Similarity=0.109 Sum_probs=91.2
Q ss_pred CCCCCCceEEEEccCCCC----CCchhHHHHHHHHhcCCCeEEEEEeCCCCCC--Cchhhhcc-cH--HHHHHHHHHHHH
Q psy545 105 NFDPKKKTKFIIHGFIDT----PLSSWVKEMRRELLKHSDWNVIVVDWAGGSL--PLYTQATA-NT--RLVGLELAYFVN 175 (531)
Q Consensus 105 ~fn~~~ptvviIHGw~~s----~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~--~~Y~~a~~-n~--r~Vg~~la~~I~ 175 (531)
.+...-||++.|-|=.+- -+..|+..|+-..|+..||.|+++|-||.+. ..+..+.. +. -.+-.++ +-++
T Consensus 637 ~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQV-eglq 715 (867)
T KOG2281|consen 637 QPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQV-EGLQ 715 (867)
T ss_pred CCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhH-HHHH
Confidence 345567899999885532 2246777777777777899999999998653 12221111 11 1122233 3357
Q ss_pred HHHHhcC-CCCCcEEEEEechhhhhhhhhhhccCCcceeeecCCCCCccCCCCCCCCCCccchhhhHHhhhcCCcccccc
Q psy545 176 YLKDNYG-LNPADVHMIGHSLGAHTAGYAGQAIEGLGRITGLDPAEPYFQGMPPFARLDPTDADLVDVIHTDGSSIFLLG 254 (531)
Q Consensus 176 ~L~~~~g-~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItgLDPAgP~F~~~~~~~rLd~sDA~fVDvIHTd~~~~~~~g 254 (531)
+|.+++| +++++|-|-|+|.||.++..+-.+.+.|-|...-..+--.+...+.. --.+|.+.=.++. -|
T Consensus 716 ~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTg-----YTERYMg~P~~nE-----~g 785 (867)
T KOG2281|consen 716 MLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTG-----YTERYMGYPDNNE-----HG 785 (867)
T ss_pred HHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeeccc-----chhhhcCCCccch-----hc
Confidence 7777776 48899999999999999998777767666643221111111110000 0013333222222 25
Q ss_pred cccccccccccccCCC
Q psy545 255 YGMSETCGHLDFYPNN 270 (531)
Q Consensus 255 ~G~~~p~GHvDFYPNG 270 (531)
+|...-.|||.=+|+-
T Consensus 786 Y~agSV~~~Veklpde 801 (867)
T KOG2281|consen 786 YGAGSVAGHVEKLPDE 801 (867)
T ss_pred ccchhHHHHHhhCCCC
Confidence 7777777888877764
No 178
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.68 E-value=0.13 Score=50.63 Aligned_cols=39 Identities=15% Similarity=0.145 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC
Q psy545 168 LELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 168 ~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
.++...+..+.++ .+..++.+.||||||.+|..++..+.
T Consensus 112 ~~~~~~~~~~~~~--~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 112 NQVLPELKSALKQ--YPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHHHHHHHHHhh--CCCceEEEEccCHHHHHHHHHHHHHH
Confidence 3444445544433 35678999999999999998776543
No 179
>COG0627 Predicted esterase [General function prediction only]
Probab=93.12 E-value=0.26 Score=51.70 Aligned_cols=65 Identities=22% Similarity=0.215 Sum_probs=35.4
Q ss_pred CeEEEEEeCCCCCCCchhhhcc--------cH-HHHHHHHHHHHHHHHHhcCCCC--CcEEEEEechhhhhhhhhhhcc
Q psy545 140 DWNVIVVDWAGGSLPLYTQATA--------NT-RLVGLELAYFVNYLKDNYGLNP--ADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 140 d~NVI~VDw~g~~~~~Y~~a~~--------n~-r~Vg~~la~~I~~L~~~~g~~~--~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
+.++.+|++.|++.+.|..+.. +. ..+..+|-. .+.+.+..+- ++--|+|||||||=|...+.+.
T Consensus 98 ~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl~~ELP~---~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~ 173 (316)
T COG0627 98 GVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFLTQELPA---LWEAAFPADGTGDGRAIAGHSMGGYGALKLALKH 173 (316)
T ss_pred CCCccccccCCCccceecccccCccccCccchhHHHHhhhhH---HHHHhcCcccccCCceeEEEeccchhhhhhhhhC
Confidence 4566666766666555544322 11 122223332 2323333333 3789999999999998644433
No 180
>KOG3975|consensus
Probab=92.74 E-value=0.63 Score=47.34 Aligned_cols=112 Identities=20% Similarity=0.134 Sum_probs=67.4
Q ss_pred CCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCC--eEEEEEeCCCCCCCch-----hhhc-ccHHHHHHHHHHHHHHH
Q psy545 106 FDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSD--WNVIVVDWAGGSLPLY-----TQAT-ANTRLVGLELAYFVNYL 177 (531)
Q Consensus 106 fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d--~NVI~VDw~g~~~~~Y-----~~a~-~n~r~Vg~~la~~I~~L 177 (531)
++..++.+++|-|=.|.. .+...+..+|..... ..|..+--.+|+..+- .+.. ...-....+|.+-++.+
T Consensus 25 ~~~~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFi 102 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFI 102 (301)
T ss_pred CCCCceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHH
Confidence 456788899999987765 345556666654322 3356665566654220 0111 11112345666666666
Q ss_pred HHhcCCCCCcEEEEEechhhhhhhhhhhccC--C-cceeeecCCCC
Q psy545 178 KDNYGLNPADVHMIGHSLGAHTAGYAGQAIE--G-LGRITGLDPAE 220 (531)
Q Consensus 178 ~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~--~-V~RItgLDPAg 220 (531)
.+ +--.-.+++|||||.||.+...+..... . |.+..+|=|.-
T Consensus 103 k~-~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 103 KE-YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred HH-hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 43 2223478999999999999887655332 2 88888886653
No 181
>PLN02408 phospholipase A1
Probab=92.63 E-value=0.14 Score=54.72 Aligned_cols=44 Identities=27% Similarity=0.351 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC
Q psy545 165 LVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 165 ~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
.+.++|.+-|+.|.+.++-..-+|++.||||||.+|..++..+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 34455555566665555422346999999999999998776553
No 182
>PLN02454 triacylglycerol lipase
Probab=92.44 E-value=0.18 Score=54.64 Aligned_cols=43 Identities=28% Similarity=0.290 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhcc
Q psy545 165 LVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 165 ~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
.+..++-..|+.|.+.+.-..-+|++.||||||.+|..++..+
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 4555666667777665421112499999999999999877654
No 183
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=92.23 E-value=0.54 Score=55.02 Aligned_cols=84 Identities=15% Similarity=0.121 Sum_probs=55.3
Q ss_pred HhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhc--------------CCCCCcEEEEEechhhhhh
Q psy545 135 LLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNY--------------GLNPADVHMIGHSLGAHTA 200 (531)
Q Consensus 135 LL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~--------------g~~~~~vhLIGHSLGAhVA 200 (531)
++...||+|+++|.+|.+.+.-...... ..-.++....|+||.... .....+|-++|.|+||.++
T Consensus 274 ~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~ 352 (767)
T PRK05371 274 YFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLP 352 (767)
T ss_pred HHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHH
Confidence 4444699999999999765321101111 223457778899996321 1235799999999999999
Q ss_pred hhhhh-ccCCcceeeecCCC
Q psy545 201 GYAGQ-AIEGLGRITGLDPA 219 (531)
Q Consensus 201 g~ag~-~~~~V~RItgLDPA 219 (531)
..++. ..+++..|+...+.
T Consensus 353 ~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 353 NAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHhhCCCcceEEEeeCCC
Confidence 86554 45668888765443
No 184
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=92.02 E-value=1 Score=45.84 Aligned_cols=105 Identities=18% Similarity=0.150 Sum_probs=56.2
Q ss_pred cCCCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCC-CCchhhhcccHHHHHHHHHHHHHHHHHhcC
Q psy545 104 SNFDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGS-LPLYTQATANTRLVGLELAYFVNYLKDNYG 182 (531)
Q Consensus 104 s~fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~-~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g 182 (531)
++-....+|+++--||..... . ...|+. +|...|+.||-.|-..|- .+.-.-.......-.+.+...++||.+ .
T Consensus 24 ~~~~~~~~tiliA~Gf~rrmd-h-~agLA~-YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~-~- 98 (294)
T PF02273_consen 24 NNEPKRNNTILIAPGFARRMD-H-FAGLAE-YLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLAT-R- 98 (294)
T ss_dssp TTS---S-EEEEE-TT-GGGG-G-GHHHHH-HHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHH-T-
T ss_pred CCCcccCCeEEEecchhHHHH-H-HHHHHH-HHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHh-c-
Confidence 344455689999999987663 3 345654 666679999999987662 221111112223344678888999973 4
Q ss_pred CCCCcEEEEEechhhhhhhhhhhccCCcceeee
Q psy545 183 LNPADVHMIGHSLGAHTAGYAGQAIEGLGRITG 215 (531)
Q Consensus 183 ~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItg 215 (531)
...++-||.-||-|.||..++... +++.+++
T Consensus 99 -g~~~~GLIAaSLSaRIAy~Va~~i-~lsfLit 129 (294)
T PF02273_consen 99 -GIRRIGLIAASLSARIAYEVAADI-NLSFLIT 129 (294)
T ss_dssp -T---EEEEEETTHHHHHHHHTTTS---SEEEE
T ss_pred -CCCcchhhhhhhhHHHHHHHhhcc-CcceEEE
Confidence 468899999999999999876665 3555443
No 185
>KOG3967|consensus
Probab=92.00 E-value=0.62 Score=46.38 Aligned_cols=102 Identities=20% Similarity=0.242 Sum_probs=61.2
Q ss_pred CCCceEEEEccCCCCCCchhHHH---------------HHHHHhcCCCeEEEEEeCCCCCC--------CchhhhcccHH
Q psy545 108 PKKKTKFIIHGFIDTPLSSWVKE---------------MRRELLKHSDWNVIVVDWAGGSL--------PLYTQATANTR 164 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w~~~---------------l~~aLL~~~d~NVI~VDw~g~~~--------~~Y~~a~~n~r 164 (531)
..++.+|+|||-+--....|.+. +..|. .+||-||+.+-...-. ..|.+ +.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv--~~Gygviv~N~N~~~kfye~k~np~kyir----t~ 172 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAV--AEGYGVIVLNPNRERKFYEKKRNPQKYIR----TP 172 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHH--HcCCcEEEeCCchhhhhhhcccCcchhcc----ch
Confidence 35668999999543222345433 33333 2689999998764321 12322 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC---cceeeecCCC
Q psy545 165 LVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG---LGRITGLDPA 219 (531)
Q Consensus 165 ~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~---V~RItgLDPA 219 (531)
| +........+. .-...++|.++.||.||....-+..++++ |..|..-|.+
T Consensus 173 -v-eh~~yvw~~~v--~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 173 -V-EHAKYVWKNIV--LPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred -H-HHHHHHHHHHh--cccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 1 12222223332 23468999999999999988876666664 7777777876
No 186
>KOG1553|consensus
Probab=91.90 E-value=0.36 Score=51.05 Aligned_cols=70 Identities=16% Similarity=0.268 Sum_probs=52.5
Q ss_pred CCeEEEEEeCCCCCCC---chhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCCcceee
Q psy545 139 SDWNVIVVDWAGGSLP---LYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEGLGRIT 214 (531)
Q Consensus 139 ~d~NVI~VDw~g~~~~---~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RIt 214 (531)
.+|.|+..+.+|++.+ +|++...| .+..+. ++.....|+..++|.|.|+|.||.-+.+|+..++.|+.++
T Consensus 267 lgYsvLGwNhPGFagSTG~P~p~n~~n---A~DaVv---QfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavv 339 (517)
T KOG1553|consen 267 LGYSVLGWNHPGFAGSTGLPYPVNTLN---AADAVV---QFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVV 339 (517)
T ss_pred hCceeeccCCCCccccCCCCCcccchH---HHHHHH---HHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEE
Confidence 3899999999998753 56543333 233333 3333456899999999999999999999999999887765
No 187
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=91.61 E-value=0.53 Score=53.39 Aligned_cols=137 Identities=20% Similarity=0.164 Sum_probs=81.7
Q ss_pred CCCCCceEEEEcc-CCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC---Cchhhhc----ccHHHHHHHHHHHHHHH
Q psy545 106 FDPKKKTKFIIHG-FIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL---PLYTQAT----ANTRLVGLELAYFVNYL 177 (531)
Q Consensus 106 fn~~~ptvviIHG-w~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~---~~Y~~a~----~n~r~Vg~~la~~I~~L 177 (531)
.+.+.|.++..-| |+.+. ..++...+-.|+++ |+-..+.--||++. .+|..+. .|+ .-..|| ..+.|
T Consensus 444 ~~g~~p~lLygYGaYG~s~-~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~WYe~GK~l~K~NT--f~DFIa-~a~~L 518 (682)
T COG1770 444 LDGSAPLLLYGYGAYGISM-DPSFSIARLSLLDR-GFVYAIAHVRGGGELGRAWYEDGKLLNKKNT--FTDFIA-AARHL 518 (682)
T ss_pred CCCCCcEEEEEeccccccC-CcCcccceeeeecC-ceEEEEEEeecccccChHHHHhhhhhhcccc--HHHHHH-HHHHH
Confidence 4556666665555 33333 33344444457775 78777777788764 4564432 232 112222 23555
Q ss_pred HHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceee-----------ecCCCCCccCCCCCCCCCCccchhhhHHhhh
Q psy545 178 KDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRIT-----------GLDPAEPYFQGMPPFARLDPTDADLVDVIHT 245 (531)
Q Consensus 178 ~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RIt-----------gLDPAgP~F~~~~~~~rLd~sDA~fVDvIHT 245 (531)
.++--.+.+++.++|-|.||.++|.++..-+. ...|+ -|||.-|+-... -.+-=+|.|+++-+.|.+
T Consensus 519 v~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E-~~EWGNP~d~e~y~yikS 597 (682)
T COG1770 519 VKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTE-WDEWGNPLDPEYYDYIKS 597 (682)
T ss_pred HHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccc-hhhhCCcCCHHHHHHHhh
Confidence 54332367899999999999999998876654 33333 478888874321 123345668888888877
Q ss_pred cCC
Q psy545 246 DGS 248 (531)
Q Consensus 246 d~~ 248 (531)
-..
T Consensus 598 YSP 600 (682)
T COG1770 598 YSP 600 (682)
T ss_pred cCc
Confidence 654
No 188
>KOG2100|consensus
Probab=91.04 E-value=0.56 Score=54.84 Aligned_cols=111 Identities=17% Similarity=0.140 Sum_probs=66.4
Q ss_pred cCCCCC--CceEEEEccCCCCCC------chhHHHHHHHHhcCCCeEEEEEeCCCCCC--Cchhhhcc-cH--HHHHHHH
Q psy545 104 SNFDPK--KKTKFIIHGFIDTPL------SSWVKEMRRELLKHSDWNVIVVDWAGGSL--PLYTQATA-NT--RLVGLEL 170 (531)
Q Consensus 104 s~fn~~--~ptvviIHGw~~s~~------~~w~~~l~~aLL~~~d~NVI~VDw~g~~~--~~Y~~a~~-n~--r~Vg~~l 170 (531)
.+|+++ -|.+|.+||=.++.. ..|... +....|+-|+.||.||-+. ..+..+.. +. ..| ++.
T Consensus 518 ~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~----~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev-~D~ 592 (755)
T KOG2100|consen 518 PNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV----VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEV-KDQ 592 (755)
T ss_pred CCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH----hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcch-HHH
Confidence 455554 467888898765321 245433 4455799999999998653 22222211 11 111 222
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC-Cccee-eecCCC
Q psy545 171 AYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE-GLGRI-TGLDPA 219 (531)
Q Consensus 171 a~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~-~V~RI-tgLDPA 219 (531)
-..++.+.+..-++.++|-|.|+|-||-++..+....+ .+-+- +.+.|.
T Consensus 593 ~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPV 643 (755)
T KOG2100|consen 593 IEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPV 643 (755)
T ss_pred HHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecce
Confidence 23344444445679999999999999999987555444 34433 666665
No 189
>PLN02324 triacylglycerol lipase
Probab=90.97 E-value=0.29 Score=53.04 Aligned_cols=43 Identities=19% Similarity=0.207 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhcc
Q psy545 165 LVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 165 ~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
.+.++|..-|..|.+.+.-..-+|++.||||||.+|..++..+
T Consensus 194 SareqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 4445555556666554421123799999999999999877554
No 190
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=90.94 E-value=0.3 Score=51.86 Aligned_cols=59 Identities=24% Similarity=0.298 Sum_probs=39.4
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC-----C-cceeeecCC
Q psy545 156 YTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE-----G-LGRITGLDP 218 (531)
Q Consensus 156 Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~-----~-V~RItgLDP 218 (531)
|..+....+.+|..||+.|..- .. ....|+||||||||.|..++-+.+. + |..++.+..
T Consensus 194 w~~a~~rA~~aG~~LA~~L~~~--~~--G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Ga 258 (345)
T PF05277_consen 194 WSVAKDRAEKAGKVLADALLSR--NQ--GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGA 258 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--cC--CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecC
Confidence 3344445567788888766432 12 3457999999999999887655442 3 778777753
No 191
>PLN02802 triacylglycerol lipase
Probab=90.66 E-value=0.26 Score=54.54 Aligned_cols=44 Identities=23% Similarity=0.254 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC
Q psy545 165 LVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 165 ~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
.+.++|-.-|..|.+.+.-..-+|+|.||||||.+|..++..+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~ 352 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELA 352 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHH
Confidence 34445555555555544312237999999999999998776653
No 192
>PLN02571 triacylglycerol lipase
Probab=90.53 E-value=0.34 Score=52.58 Aligned_cols=40 Identities=28% Similarity=0.311 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhcc
Q psy545 168 LELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 168 ~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
.++-.-|+.|.+.+.-..-+|++.||||||.+|..++..+
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 4444445555444321112689999999999999877654
No 193
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=90.36 E-value=0.41 Score=46.80 Aligned_cols=92 Identities=20% Similarity=0.295 Sum_probs=41.3
Q ss_pred CCceEEEEccCCCCCC--chhHHHHHHHHhcCCCeEEEEEeCCCCC-----CC------------------chhhh--cc
Q psy545 109 KKKTKFIIHGFIDTPL--SSWVKEMRRELLKHSDWNVIVVDWAGGS-----LP------------------LYTQA--TA 161 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~--~~w~~~l~~aLL~~~d~NVI~VDw~g~~-----~~------------------~Y~~a--~~ 161 (531)
.++-++.+|||+.|+. ..-...|..+|-+ .++..+.+|-+--. .. ++... ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~-~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKK-LDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHH-TT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhh-CcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 4677999999999974 1223445554432 26888888865211 00 00000 01
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhh
Q psy545 162 NTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQ 205 (531)
Q Consensus 162 n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~ 205 (531)
....+-..+..+.+.+.+ .| + =.-|||||.||.+|..+..
T Consensus 82 ~~~~~~~sl~~l~~~i~~-~G-P--fdGvlGFSQGA~lAa~ll~ 121 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEE-NG-P--FDGVLGFSQGAALAALLLA 121 (212)
T ss_dssp GG---HHHHHHHHHHHHH-H------SEEEEETHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHh-cC-C--eEEEEeecHHHHHHHHHHH
Confidence 123334445555555543 22 1 2369999999999986543
No 194
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=89.63 E-value=1.6 Score=47.24 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=62.9
Q ss_pred cCCCCCCceEEEEccCCCCCCchhHH-HHHHHHhcCCCeEEEEEeCCCCCCC-chhh-h-----cccHHHHHHHHHHHHH
Q psy545 104 SNFDPKKKTKFIIHGFIDTPLSSWVK-EMRRELLKHSDWNVIVVDWAGGSLP-LYTQ-A-----TANTRLVGLELAYFVN 175 (531)
Q Consensus 104 s~fn~~~ptvviIHGw~~s~~~~w~~-~l~~aLL~~~d~NVI~VDw~g~~~~-~Y~~-a-----~~n~r~Vg~~la~~I~ 175 (531)
..+.++.|.+|++=|= +.....|+. .+...|.++-+.-||++..|-.|.+ ++.. + -.+++..-+++|.||+
T Consensus 23 ~~~~~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~ 101 (434)
T PF05577_consen 23 QYYKPGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIR 101 (434)
T ss_dssp TT--TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHH
T ss_pred hhcCCCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHH
Confidence 3456667766666443 222222321 1233344445789999999988764 2221 1 1356777889999999
Q ss_pred HHHHhcC-CCCCcEEEEEechhhhhhhhhhhccCC
Q psy545 176 YLKDNYG-LNPADVHMIGHSLGAHTAGYAGQAIEG 209 (531)
Q Consensus 176 ~L~~~~g-~~~~~vhLIGHSLGAhVAg~ag~~~~~ 209 (531)
++..+.. .+-.++.++|-|.||.+|.++-..++.
T Consensus 102 ~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~ 136 (434)
T PF05577_consen 102 YVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH 136 (434)
T ss_dssp HHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT
T ss_pred HHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC
Confidence 9986553 344689999999999999998887776
No 195
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=89.37 E-value=0.9 Score=49.01 Aligned_cols=72 Identities=21% Similarity=0.327 Sum_probs=53.5
Q ss_pred HHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC
Q psy545 129 KEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 129 ~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
..+..+| ++.|+.||-||=- .|......-..+|.+++.+|++-.... ...++.|||+|.||-|-=++-.+++
T Consensus 277 k~v~~~l-~~~gvpVvGvdsL-----RYfW~~rtPe~~a~Dl~r~i~~y~~~w--~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 277 KEVAEAL-QKQGVPVVGVDSL-----RYFWSERTPEQIAADLSRLIRFYARRW--GAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHH-HHCCCceeeeehh-----hhhhccCCHHHHHHHHHHHHHHHHHhh--CcceEEEEeecccchhhHHHHHhCC
Confidence 3455555 4569999999954 355555566788999999999876555 4689999999999998766655544
No 196
>PLN02761 lipase class 3 family protein
Probab=88.93 E-value=0.48 Score=52.65 Aligned_cols=42 Identities=29% Similarity=0.339 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHhcCC----CCCcEEEEEechhhhhhhhhhhcc
Q psy545 166 VGLELAYFVNYLKDNYGL----NPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 166 Vg~~la~~I~~L~~~~g~----~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
+.++|-..|+.|.+.++- ..-+|++.||||||.+|..++-.+
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445565556666655421 234799999999999999877654
No 197
>PLN02310 triacylglycerol lipase
Probab=88.81 E-value=0.46 Score=51.46 Aligned_cols=39 Identities=23% Similarity=0.227 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhcC--CCCCcEEEEEechhhhhhhhhhhcc
Q psy545 169 ELAYFVNYLKDNYG--LNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 169 ~la~~I~~L~~~~g--~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
++..-|..|.+.+. -..-+|+|.||||||.+|..++..+
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 34334444443332 1234799999999999999877554
No 198
>PLN02753 triacylglycerol lipase
Probab=88.39 E-value=0.59 Score=52.00 Aligned_cols=43 Identities=23% Similarity=0.227 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhcCC---CCCcEEEEEechhhhhhhhhhhcc
Q psy545 165 LVGLELAYFVNYLKDNYGL---NPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 165 ~Vg~~la~~I~~L~~~~g~---~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
.+.++|-..|+.|.+.+.- ..-+|++.||||||.+|..++..+
T Consensus 288 S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 288 SAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred hHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 3455666566666655432 245899999999999999877544
No 199
>PLN02847 triacylglycerol lipase
Probab=87.84 E-value=0.64 Score=52.43 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhcc
Q psy545 166 VGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 166 Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
+...+...|..+... .+--++.|+||||||.+|..++..+
T Consensus 233 I~~~i~~~L~kal~~--~PdYkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 233 IAKLSTPCLLKALDE--YPDFKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred HHHHHHHHHHHHHHH--CCCCeEEEeccChHHHHHHHHHHHH
Confidence 334444444444332 2445899999999999999876654
No 200
>KOG4840|consensus
Probab=87.71 E-value=2.4 Score=42.58 Aligned_cols=90 Identities=20% Similarity=0.306 Sum_probs=57.7
Q ss_pred CCCCceEEEEccCCCCCC-chhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCC
Q psy545 107 DPKKKTKFIIHGFIDTPL-SSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~-~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~ 185 (531)
+..+-.+|+|-|.++.-- ..+...+...| ...++..|.+-.+..-. .| .......-.++|..+|+++.. .+.+
T Consensus 33 gv~~~~vvfiGGLgdgLl~~~y~~~L~~~l-de~~wslVq~q~~Ssy~-G~--Gt~slk~D~edl~~l~~Hi~~-~~fS- 106 (299)
T KOG4840|consen 33 GVESVKVVFIGGLGDGLLICLYTTMLNRYL-DENSWSLVQPQLRSSYN-GY--GTFSLKDDVEDLKCLLEHIQL-CGFS- 106 (299)
T ss_pred CceEEEEEEEcccCCCccccccHHHHHHHH-hhccceeeeeecccccc-cc--ccccccccHHHHHHHHHHhhc-cCcc-
Confidence 344566889999887643 34566666555 44688888887654211 11 112233345788888998752 4443
Q ss_pred CcEEEEEechhhhhhhh
Q psy545 186 ADVHMIGHSLGAHTAGY 202 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~ 202 (531)
.+|.|+|||-|.+=..|
T Consensus 107 t~vVL~GhSTGcQdi~y 123 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMY 123 (299)
T ss_pred cceEEEecCccchHHHH
Confidence 49999999999996664
No 201
>PLN00413 triacylglycerol lipase
Probab=87.69 E-value=0.59 Score=51.42 Aligned_cols=23 Identities=26% Similarity=0.261 Sum_probs=19.6
Q ss_pred CCCcEEEEEechhhhhhhhhhhc
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~ 206 (531)
+..++++.||||||.+|.+++..
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHH
Confidence 56789999999999999987643
No 202
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=87.68 E-value=4 Score=44.26 Aligned_cols=42 Identities=31% Similarity=0.326 Sum_probs=32.0
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCC
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGG 151 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~ 151 (531)
+-.||+|-||+++........+++.+.+.-++-||.||+-+.
T Consensus 35 kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf 76 (403)
T PF11144_consen 35 KAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCF 76 (403)
T ss_pred eEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeehe
Confidence 447999999999998777777777666555667777787654
No 203
>KOG2931|consensus
Probab=87.66 E-value=2.9 Score=43.50 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=67.6
Q ss_pred CCCceEEEEccCCCCCCchh-----HHHHHHHHhcCCCeEEEEEeCCCCCC--Cchhhh--cccHHHHHHHHHHHHHHHH
Q psy545 108 PKKKTKFIIHGFIDTPLSSW-----VKEMRRELLKHSDWNVIVVDWAGGSL--PLYTQA--TANTRLVGLELAYFVNYLK 178 (531)
Q Consensus 108 ~~~ptvviIHGw~~s~~~~w-----~~~l~~aLL~~~d~NVI~VDw~g~~~--~~Y~~a--~~n~r~Vg~~la~~I~~L~ 178 (531)
..+|.+|-.|..+-+..+.+ ...|+ .++. .+.|+-||-+|+.. +..+.. -.....+|++|-..++++
T Consensus 44 ~~kpaiiTyhDlglN~~scFq~ff~~p~m~-ei~~--~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f- 119 (326)
T KOG2931|consen 44 GNKPAIITYHDLGLNHKSCFQGFFNFPDMA-EILE--HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF- 119 (326)
T ss_pred CCCceEEEecccccchHhHhHHhhcCHhHH-HHHh--heEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-
Confidence 35888888899887765322 23444 3554 49999999998742 221111 123455566665555544
Q ss_pred HhcCCCCCcEEEEEechhhhhhh-hhhhccCCcceeeecCC
Q psy545 179 DNYGLNPADVHMIGHSLGAHTAG-YAGQAIEGLGRITGLDP 218 (531)
Q Consensus 179 ~~~g~~~~~vhLIGHSLGAhVAg-~ag~~~~~V~RItgLDP 218 (531)
.++.|.-+|--.||.|-. ||..+.+.|..|+.+.+
T Consensus 120 -----~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~ 155 (326)
T KOG2931|consen 120 -----GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINC 155 (326)
T ss_pred -----CcceEEEecccccHHHHHHHHhcChhheeEEEEEec
Confidence 578999999999999854 77777777888887654
No 204
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=87.54 E-value=2.2 Score=44.16 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=60.1
Q ss_pred CCceEEEEccCCCCCCchhH-----HHHHHHHhcCCCeEEEEEeCCCCCC--Cchhhh--cccHHHHHHHHHHHHHHHHH
Q psy545 109 KKKTKFIIHGFIDTPLSSWV-----KEMRRELLKHSDWNVIVVDWAGGSL--PLYTQA--TANTRLVGLELAYFVNYLKD 179 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~-----~~l~~aLL~~~d~NVI~VDw~g~~~--~~Y~~a--~~n~r~Vg~~la~~I~~L~~ 179 (531)
.+|++|-.|-.+-+..+.+. ..| ..++ ..+.|+=||.+|+.. ...+.. .......|++|...++++
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m-~~i~--~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-- 96 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDM-QEIL--QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-- 96 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHH-HHHH--TTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH--
T ss_pred CCceEEEeccccccchHHHHHHhcchhH-HHHh--hceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC--
Confidence 58999999998877643221 223 3344 369999999999742 222221 234566777777777765
Q ss_pred hcCCCCCcEEEEEechhhhhhh-hhhhccCCcceeeecCCC
Q psy545 180 NYGLNPADVHMIGHSLGAHTAG-YAGQAIEGLGRITGLDPA 219 (531)
Q Consensus 180 ~~g~~~~~vhLIGHSLGAhVAg-~ag~~~~~V~RItgLDPA 219 (531)
.++.|.-+|--.||.|-. ||.++...|..++.+.|.
T Consensus 97 ----~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~ 133 (283)
T PF03096_consen 97 ----GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPT 133 (283)
T ss_dssp ----T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES--
T ss_pred ----CccEEEEEeeccchhhhhhccccCccceeEEEEEecC
Confidence 468899999999999865 677777678888888764
No 205
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=86.57 E-value=4.4 Score=41.22 Aligned_cols=76 Identities=24% Similarity=0.270 Sum_probs=43.6
Q ss_pred hHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCC--cEEEEEechhhhhhhhhh
Q psy545 127 WVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPA--DVHMIGHSLGAHTAGYAG 204 (531)
Q Consensus 127 w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~--~vhLIGHSLGAhVAg~ag 204 (531)
....+.+.|.+ .||.||+.=+.-. -.+...| +.+-......++.|.+..++... .++=||||||+-+-..++
T Consensus 35 tYr~lLe~La~-~Gy~ViAtPy~~t-fDH~~~A----~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~ 108 (250)
T PF07082_consen 35 TYRYLLERLAD-RGYAVIATPYVVT-FDHQAIA----REVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIG 108 (250)
T ss_pred HHHHHHHHHHh-CCcEEEEEecCCC-CcHHHHH----HHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHh
Confidence 34556666665 5899999876432 1222222 22223333334555544444433 567799999998877776
Q ss_pred hccC
Q psy545 205 QAIE 208 (531)
Q Consensus 205 ~~~~ 208 (531)
....
T Consensus 109 s~~~ 112 (250)
T PF07082_consen 109 SLFD 112 (250)
T ss_pred hhcc
Confidence 6543
No 206
>PLN02162 triacylglycerol lipase
Probab=86.36 E-value=0.71 Score=50.72 Aligned_cols=23 Identities=26% Similarity=0.290 Sum_probs=19.1
Q ss_pred CCCcEEEEEechhhhhhhhhhhc
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~ 206 (531)
+..++++.||||||.+|..++..
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHH
Confidence 45789999999999999876543
No 207
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=86.31 E-value=1.8 Score=49.12 Aligned_cols=70 Identities=11% Similarity=0.033 Sum_probs=41.1
Q ss_pred HHHHHHHhcC----CCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhh
Q psy545 129 KEMRRELLKH----SDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAG 204 (531)
Q Consensus 129 ~~l~~aLL~~----~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag 204 (531)
..|++.|... .+......|||-.......+ ...-..|..+|+.+.+.. .-++|.|||||||+.++.+.-
T Consensus 159 ~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~r-----d~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 159 AVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVR-----DQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred HHHHHHHHHcCCCCCceeecccccccCccchhhh-----hHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHH
Confidence 4677776543 22344556777432111000 122245777787765432 247999999999999998643
Q ss_pred h
Q psy545 205 Q 205 (531)
Q Consensus 205 ~ 205 (531)
+
T Consensus 232 ~ 232 (642)
T PLN02517 232 K 232 (642)
T ss_pred H
Confidence 3
No 208
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=86.07 E-value=2 Score=42.97 Aligned_cols=61 Identities=23% Similarity=0.324 Sum_probs=39.0
Q ss_pred CeEEEEEeCCCCC-------CCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhcc
Q psy545 140 DWNVIVVDWAGGS-------LPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 140 d~NVI~VDw~g~~-------~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
|+++..|+|+..- ...|.++ |+.=++.+.+.+..... ..+++.++|+|.||.||+.+.+++
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~S------v~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDES------VAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchH------HHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHH
Confidence 6788899998621 1223222 33344444454443222 568899999999999999876654
No 209
>PLN02719 triacylglycerol lipase
Probab=85.89 E-value=0.92 Score=50.38 Aligned_cols=42 Identities=24% Similarity=0.319 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHhcCC---CCCcEEEEEechhhhhhhhhhhcc
Q psy545 166 VGLELAYFVNYLKDNYGL---NPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 166 Vg~~la~~I~~L~~~~g~---~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
+.++|-.-|..|.+.+.- ..-+|++.||||||.+|..++..+
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 344555556666554421 224799999999999999877554
No 210
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=85.71 E-value=0.96 Score=46.27 Aligned_cols=52 Identities=27% Similarity=0.411 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCC
Q psy545 165 LVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPA 219 (531)
Q Consensus 165 ~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPA 219 (531)
.+-++|.-+|+. .+..+.++..|+||||||-++.++....+. .++.....|+
T Consensus 119 fL~~~lkP~Ie~---~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 119 FLTEQLKPFIEA---RYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HHHHhhHHHHhc---ccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 334444444433 355677889999999999999998887765 6777666665
No 211
>PLN03037 lipase class 3 family protein; Provisional
Probab=85.13 E-value=0.93 Score=50.41 Aligned_cols=22 Identities=27% Similarity=0.357 Sum_probs=18.4
Q ss_pred CcEEEEEechhhhhhhhhhhcc
Q psy545 186 ADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
-+|+|.||||||.+|..++-.+
T Consensus 318 ~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHH
Confidence 4799999999999998776543
No 212
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=84.54 E-value=2 Score=45.43 Aligned_cols=66 Identities=17% Similarity=0.165 Sum_probs=44.9
Q ss_pred CeEEEEEeCCCCCCCchhh----hcccHHHHHHHHHHHHHHHHHhcC-CCCCcEEEEEechhhhhhhhhhh
Q psy545 140 DWNVIVVDWAGGSLPLYTQ----ATANTRLVGLELAYFVNYLKDNYG-LNPADVHMIGHSLGAHTAGYAGQ 205 (531)
Q Consensus 140 d~NVI~VDw~g~~~~~Y~~----a~~n~r~Vg~~la~~I~~L~~~~g-~~~~~vhLIGHSLGAhVAg~ag~ 205 (531)
..||+-||.+-+..-.|.. -..+...+|+++..||+.+...+. +...+++|.|-|.|||-+-.++.
T Consensus 85 ~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp TSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHH
T ss_pred ccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHH
Confidence 4899999988654433332 234788999999999987665543 44568999999999997654443
No 213
>KOG2183|consensus
Probab=84.16 E-value=4.1 Score=44.31 Aligned_cols=104 Identities=13% Similarity=0.151 Sum_probs=68.4
Q ss_pred cccCCCCCCceEEEEccCCCCCC-----chhHHHHHHHHhcCCCeEEEEEeCCCCCCC------chhhhc----ccHHHH
Q psy545 102 EKSNFDPKKKTKFIIHGFIDTPL-----SSWVKEMRRELLKHSDWNVIVVDWAGGSLP------LYTQAT----ANTRLV 166 (531)
Q Consensus 102 ~~s~fn~~~ptvviIHGw~~s~~-----~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~------~Y~~a~----~n~r~V 166 (531)
.+..+..+.-+|++--|=-++-. ..++.++++.+ +.-+|.+..|-.|.+ .|..+. .+....
T Consensus 72 n~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~----~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQA 147 (492)
T KOG2183|consen 72 NDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPEL----KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQA 147 (492)
T ss_pred ecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHhh----CceEEEeehhccccCCCCcchhccChhhhccccHHHH
Confidence 34456666445777666433321 23455666544 467888898876642 232221 244555
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccCC
Q psy545 167 GLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIEG 209 (531)
Q Consensus 167 g~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~ 209 (531)
-++-|.+|..|.+..+.....|..+|-|.||++|.+.-..++.
T Consensus 148 LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 148 LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 5688889999988777778899999999999999877655554
No 214
>PLN02934 triacylglycerol lipase
Probab=83.88 E-value=1 Score=49.99 Aligned_cols=31 Identities=26% Similarity=0.234 Sum_probs=22.6
Q ss_pred HHHHHHhcCCCCCcEEEEEechhhhhhhhhhhc
Q psy545 174 VNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 174 I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 206 (531)
|+.+.+++ +..++++.||||||.+|..++..
T Consensus 311 lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 311 LKSLLKEH--KNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHC--CCCeEEEeccccHHHHHHHHHHH
Confidence 44444332 55789999999999999877643
No 215
>KOG3043|consensus
Probab=83.43 E-value=3.5 Score=41.40 Aligned_cols=88 Identities=17% Similarity=0.269 Sum_probs=56.2
Q ss_pred ceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCC---C----Cchhh--hcccHHHHHHHHHHHHHHHHHhc
Q psy545 111 KTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGS---L----PLYTQ--ATANTRLVGLELAYFVNYLKDNY 181 (531)
Q Consensus 111 ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~---~----~~Y~~--a~~n~r~Vg~~la~~I~~L~~~~ 181 (531)
..+|+|--|-+... .-....++.+. ..||+|+++|+-.+- . ..++. ...+-...-+++..++++|. ..
T Consensus 40 ~~li~i~DvfG~~~-~n~r~~Adk~A-~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk-~~ 116 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQF-PNTREGADKVA-LNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLK-NH 116 (242)
T ss_pred eEEEEEEeeecccc-HHHHHHHHHHh-cCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHH-Hc
Confidence 45666655544432 22445555554 359999999997661 1 11111 12334455578889999996 33
Q ss_pred CCCCCcEEEEEechhhhhhhh
Q psy545 182 GLNPADVHMIGHSLGAHTAGY 202 (531)
Q Consensus 182 g~~~~~vhLIGHSLGAhVAg~ 202 (531)
| +..+|=++|+.+||-++-.
T Consensus 117 g-~~kkIGv~GfCwGak~vv~ 136 (242)
T KOG3043|consen 117 G-DSKKIGVVGFCWGAKVVVT 136 (242)
T ss_pred C-CcceeeEEEEeecceEEEE
Confidence 4 6789999999999988764
No 216
>KOG2237|consensus
Probab=83.35 E-value=1.6 Score=49.55 Aligned_cols=103 Identities=17% Similarity=0.150 Sum_probs=62.3
Q ss_pred CCCCCCceEEEEcc-CCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC---Cchhhh-cccHHHHHHHHHHHHHHHHH
Q psy545 105 NFDPKKKTKFIIHG-FIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL---PLYTQA-TANTRLVGLELAYFVNYLKD 179 (531)
Q Consensus 105 ~fn~~~ptvviIHG-w~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~---~~Y~~a-~~n~r~Vg~~la~~I~~L~~ 179 (531)
..+.++|.+++.|| |.-+-...|-..- -.|++ .|+-....|-||+|. .++... .++-...-++.-.-.+.|.+
T Consensus 465 k~dg~~P~LLygYGay~isl~p~f~~sr-l~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve 542 (712)
T KOG2237|consen 465 KLDGSKPLLLYGYGAYGISLDPSFRASR-LSLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVE 542 (712)
T ss_pred hhcCCCceEEEEecccceeeccccccce-eEEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHH
Confidence 34567887666666 4444445664322 23566 578788889998864 233221 11111111233333466765
Q ss_pred hcCCCCCcEEEEEechhhhhhhhhhhccCC
Q psy545 180 NYGLNPADVHMIGHSLGAHTAGYAGQAIEG 209 (531)
Q Consensus 180 ~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~ 209 (531)
+.-..+++..+-|.|.||-++|.+..+-+.
T Consensus 543 ~gyt~~~kL~i~G~SaGGlLvga~iN~rPd 572 (712)
T KOG2237|consen 543 NGYTQPSKLAIEGGSAGGLLVGACINQRPD 572 (712)
T ss_pred cCCCCccceeEecccCccchhHHHhccCch
Confidence 444578999999999999999988776654
No 217
>KOG2369|consensus
Probab=82.37 E-value=1.4 Score=48.24 Aligned_cols=38 Identities=21% Similarity=0.195 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhcc
Q psy545 168 LELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 168 ~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
..++..|+.+.+..| -++|.||+||||+.+..+.-+..
T Consensus 166 ~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 166 SKLKKKIETMYKLNG--GKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHHHHcC--CCceEEEecCCccHHHHHHHhcc
Confidence 466777776654432 38999999999999998654443
No 218
>KOG4389|consensus
Probab=81.29 E-value=2.8 Score=46.45 Aligned_cols=89 Identities=28% Similarity=0.454 Sum_probs=57.0
Q ss_pred CCCCce-EEEEcc---CCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC-----CchhhhcccHHHHHHHHHHHHHHH
Q psy545 107 DPKKKT-KFIIHG---FIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL-----PLYTQATANTRLVGLELAYFVNYL 177 (531)
Q Consensus 107 n~~~pt-vviIHG---w~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~-----~~Y~~a~~n~r~Vg~~la~~I~~L 177 (531)
++..+| +|.|-| |.++.+-. +.+ .+.|...++.-|+.+++|-++- +.-+.+..|+...-++|| |+|+
T Consensus 131 ~p~n~tVlVWiyGGGF~sGt~SLd-vYd-Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLA--l~WV 206 (601)
T KOG4389|consen 131 DPYNLTVLVWIYGGGFYSGTPSLD-VYD-GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLA--LQWV 206 (601)
T ss_pred CCCCceEEEEEEcCccccCCccee-eec-cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHH--HHHH
Confidence 444444 455666 55655311 111 2334455666677777776542 233567789888888888 6777
Q ss_pred HH---hcCCCCCcEEEEEechhhhh
Q psy545 178 KD---NYGLNPADVHMIGHSLGAHT 199 (531)
Q Consensus 178 ~~---~~g~~~~~vhLIGHSLGAhV 199 (531)
++ .+|-++++|.|.|-|.||.-
T Consensus 207 ~~Ni~aFGGnp~~vTLFGESAGaAS 231 (601)
T KOG4389|consen 207 QENIAAFGGNPSRVTLFGESAGAAS 231 (601)
T ss_pred HHhHHHhCCCcceEEEeccccchhh
Confidence 65 46889999999999999853
No 219
>KOG2551|consensus
Probab=77.30 E-value=5.4 Score=39.97 Aligned_cols=33 Identities=30% Similarity=0.510 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhh
Q psy545 169 ELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQ 205 (531)
Q Consensus 169 ~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~ 205 (531)
.++.+.+++.+ .| +.+ =|||+|-||.+|++++.
T Consensus 91 sl~yl~~~i~e-nG-PFD--GllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 91 SLEYLEDYIKE-NG-PFD--GLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHH-hC-CCc--cccccchhHHHHHHhhc
Confidence 35555555544 33 444 37999999999987544
No 220
>KOG4388|consensus
Probab=76.81 E-value=5.1 Score=45.25 Aligned_cols=87 Identities=16% Similarity=0.243 Sum_probs=55.2
Q ss_pred CCceEEEEcc--CCCCC---CchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCC
Q psy545 109 KKKTKFIIHG--FIDTP---LSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGL 183 (531)
Q Consensus 109 ~~ptvviIHG--w~~s~---~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~ 183 (531)
++-.+|-.|| |.... .+.++..-+.+| |+-||.|||+-....+++++. ..|--..-++|+.- ...|.
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL----~cPiiSVdYSLAPEaPFPRal---eEv~fAYcW~inn~-allG~ 466 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL----GCPIISVDYSLAPEAPFPRAL---EEVFFAYCWAINNC-ALLGS 466 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHh----CCCeEEeeeccCCCCCCCcHH---HHHHHHHHHHhcCH-HHhCc
Confidence 5556777787 43322 134444444443 899999999877666677653 33333344444432 23566
Q ss_pred CCCcEEEEEechhhhhhhhh
Q psy545 184 NPADVHMIGHSLGAHTAGYA 203 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~a 203 (531)
.-++|.++|-|.||.++.-+
T Consensus 467 TgEriv~aGDSAGgNL~~~V 486 (880)
T KOG4388|consen 467 TGERIVLAGDSAGGNLCFTV 486 (880)
T ss_pred ccceEEEeccCCCcceeehh
Confidence 78999999999999986543
No 221
>KOG3253|consensus
Probab=76.61 E-value=8 Score=43.94 Aligned_cols=92 Identities=17% Similarity=0.078 Sum_probs=54.8
Q ss_pred CCCceEEEEccCC-CCCCchhHHHHHHHHhcC-CCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHH--HHHhcCC
Q psy545 108 PKKKTKFIIHGFI-DTPLSSWVKEMRRELLKH-SDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNY--LKDNYGL 183 (531)
Q Consensus 108 ~~~ptvviIHGw~-~s~~~~w~~~l~~aLL~~-~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~--L~~~~g~ 183 (531)
+..|.++++||-. ....++|+......|-.. +=.-|-..|++.... ..|+...++.+..|.+. +.-...+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~ig------G~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIG------GANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCC------CcchHHHHHHHHHHhhhhhhhhhccC
Confidence 4578899999987 222233433332222111 224566677664322 25666667777666663 2222345
Q ss_pred CCCcEEEEEechhhhhhhhhhh
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQ 205 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~ 205 (531)
+...|.|+|.||||.||-.+.-
T Consensus 248 pha~IiLvGrsmGAlVachVSp 269 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSP 269 (784)
T ss_pred CCCceEEEecccCceeeEEecc
Confidence 7789999999999988876543
No 222
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=74.03 E-value=10 Score=42.92 Aligned_cols=105 Identities=12% Similarity=-0.011 Sum_probs=61.0
Q ss_pred CCCceEEEEc--cCCCCCCchh-HHHHHHH--HhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcC
Q psy545 108 PKKKTKFIIH--GFIDTPLSSW-VKEMRRE--LLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYG 182 (531)
Q Consensus 108 ~~~ptvviIH--Gw~~s~~~~w-~~~l~~a--LL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g 182 (531)
...|+++..+ =+.-.....+ ...+.+. .....||.||.+|-||.+.+.-.......+ -+++-.+.|+||.+ .-
T Consensus 43 g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~-E~~Dg~D~I~Wia~-Qp 120 (563)
T COG2936 43 GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSR-EAEDGYDTIEWLAK-QP 120 (563)
T ss_pred CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccc-cccchhHHHHHHHh-CC
Confidence 5677777777 2222110111 1112221 334569999999999975432111111111 23466777888875 34
Q ss_pred CCCCcEEEEEechhhhhhhhhhhcc-CCcceee
Q psy545 183 LNPADVHMIGHSLGAHTAGYAGQAI-EGLGRIT 214 (531)
Q Consensus 183 ~~~~~vhLIGHSLGAhVAg~ag~~~-~~V~RIt 214 (531)
....+|-++|.|.+|+...+++... +.++-|+
T Consensus 121 WsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~ 153 (563)
T COG2936 121 WSNGNVGMLGLSYLGFTQLAAAALQPPALKAIA 153 (563)
T ss_pred ccCCeeeeecccHHHHHHHHHHhcCCchheeec
Confidence 5678999999999999998765543 3344443
No 223
>KOG2385|consensus
Probab=73.87 E-value=4.9 Score=44.69 Aligned_cols=112 Identities=21% Similarity=0.205 Sum_probs=62.4
Q ss_pred chhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC-----C-cceeeecCCCCCccCCCCC
Q psy545 155 LYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE-----G-LGRITGLDPAEPYFQGMPP 228 (531)
Q Consensus 155 ~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~-----~-V~RItgLDPAgP~F~~~~~ 228 (531)
++..+......+|+.+|+.+.. ... ....|.||||||||.+--..-..+. + |.+++.+...-|. .+
T Consensus 420 pWnia~dRa~kaG~lLAe~L~~--r~q--G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~----k~ 491 (633)
T KOG2385|consen 420 PWNIALDRADKAGELLAEALCK--RSQ--GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT----KA 491 (633)
T ss_pred chHHHhhHHHHHHHHHHHHHHH--hcc--CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC----CH
Confidence 3444555667788888877643 223 4578999999999999775433321 3 7888887643332 11
Q ss_pred CCCCC---ccchhhhHHhhhcCCcccccccccccccccccccCCCCCCCCCCCC
Q psy545 229 FARLD---PTDADLVDVIHTDGSSIFLLGYGMSETCGHLDFYPNNGKEQPGCDL 279 (531)
Q Consensus 229 ~~rLd---~sDA~fVDvIHTd~~~~~~~g~G~~~p~GHvDFYPNGG~~QPGC~~ 279 (531)
..-++ --.-+||.+.-++.-. +|+=++...| -|=-=+|..||=|..
T Consensus 492 ~~w~k~r~vVsGRFVNgYs~nDW~---L~~lfRa~s~--~~~avaGi~~~~~i~ 540 (633)
T KOG2385|consen 492 KLWLKARSVVSGRFVNGYSTNDWT---LGYLFRASSA--QFGAVAGIPQPICIP 540 (633)
T ss_pred HHHHHHHhheecceeeeeecchHH---HHHHHHHhhc--ccccccCCCccccCC
Confidence 11111 1123677776665432 2222222222 222236778999943
No 224
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=73.68 E-value=12 Score=37.29 Aligned_cols=76 Identities=18% Similarity=0.309 Sum_probs=44.5
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeEE-EEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcE
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNV-IVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADV 188 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NV-I~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~v 188 (531)
+..+|+.-||+.+.. +...|...+++.| ++.|++..... . + +. ..++|
T Consensus 11 ~~LilfF~GWg~d~~------~f~hL~~~~~~D~l~~yDYr~l~~d---------------~----~-~~-----~y~~i 59 (213)
T PF04301_consen 11 KELILFFAGWGMDPS------PFSHLILPENYDVLICYDYRDLDFD---------------F----D-LS-----GYREI 59 (213)
T ss_pred CeEEEEEecCCCChH------HhhhccCCCCccEEEEecCcccccc---------------c----c-cc-----cCceE
Confidence 568899999998763 1223322234554 45566643210 0 0 21 35799
Q ss_pred EEEEechhhhhhhhhhhccCCcceeeecC
Q psy545 189 HMIGHSLGAHTAGYAGQAIEGLGRITGLD 217 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~~~~V~RItgLD 217 (531)
+||++|||-.+|..+-+..+ +.+-+++.
T Consensus 60 ~lvAWSmGVw~A~~~l~~~~-~~~aiAIN 87 (213)
T PF04301_consen 60 YLVAWSMGVWAANRVLQGIP-FKRAIAIN 87 (213)
T ss_pred EEEEEeHHHHHHHHHhccCC-cceeEEEE
Confidence 99999999988875533322 55555553
No 225
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=73.36 E-value=3.5 Score=37.75 Aligned_cols=30 Identities=27% Similarity=0.516 Sum_probs=22.9
Q ss_pred CCCCceEEEEccCCCCCCchhHHHH-HHHHhc
Q psy545 107 DPKKKTKFIIHGFIDTPLSSWVKEM-RRELLK 137 (531)
Q Consensus 107 n~~~ptvviIHGw~~s~~~~w~~~l-~~aLL~ 137 (531)
++.+|.|+-+|||+|++. +++..| +++|..
T Consensus 49 ~p~KpLVlSfHG~tGtGK-n~v~~liA~~ly~ 79 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGK-NFVSRLIAEHLYK 79 (127)
T ss_pred CCCCCEEEEeecCCCCcH-HHHHHHHHHHHHh
Confidence 789999999999999996 555544 555443
No 226
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=72.59 E-value=4.2 Score=40.28 Aligned_cols=65 Identities=25% Similarity=0.211 Sum_probs=35.2
Q ss_pred CCeEEEEEeCCCCCCCchh-----hhcccHHH-HHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhh
Q psy545 139 SDWNVIVVDWAGGSLPLYT-----QATANTRL-VGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQ 205 (531)
Q Consensus 139 ~d~NVI~VDw~g~~~~~Y~-----~a~~n~r~-Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~ 205 (531)
+-.||.++=+|......+. .+...... .+...+.|=.+|. +.. .-..|.|+|||-||.+...+-+
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~-~~n-~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLA-NYN-NGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHH-hcC-CCCCEEEEEeChHHHHHHHHHH
Confidence 4588999988875432111 11111111 1222223333343 322 3368999999999999876544
No 227
>KOG4569|consensus
Probab=71.08 E-value=4 Score=43.12 Aligned_cols=38 Identities=26% Similarity=0.307 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC
Q psy545 169 ELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 169 ~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
.+...++.|.+.+ +--+|.+-||||||.+|..++..+.
T Consensus 156 ~~~~~~~~L~~~~--~~~~i~vTGHSLGgAlA~laa~~i~ 193 (336)
T KOG4569|consen 156 GLDAELRRLIELY--PNYSIWVTGHSLGGALASLAALDLV 193 (336)
T ss_pred HHHHHHHHHHHhc--CCcEEEEecCChHHHHHHHHHHHHH
Confidence 3444455555443 4678999999999999998877653
No 228
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=70.76 E-value=25 Score=39.11 Aligned_cols=130 Identities=17% Similarity=0.206 Sum_probs=78.4
Q ss_pred CCCCC---CceEEEEccCCCCCC-chhHHHHHHHHhcCCCe-EEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHH
Q psy545 105 NFDPK---KKTKFIIHGFIDTPL-SSWVKEMRRELLKHSDW-NVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKD 179 (531)
Q Consensus 105 ~fn~~---~ptvviIHGw~~s~~-~~w~~~l~~aLL~~~d~-NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~ 179 (531)
-|||+ .|..|..-|++.... +. ..|+..| +. -.+.-|-|--|..-|..+ ...-..|.+.|+.-.+
T Consensus 281 YFnPGD~KPPL~VYFSGyR~aEGFEg--y~MMk~L----g~PfLL~~DpRleGGaFYlGs----~eyE~~I~~~I~~~L~ 350 (511)
T TIGR03712 281 YFNPGDFKPPLNVYFSGYRPAEGFEG--YFMMKRL----GAPFLLIGDPRLEGGAFYLGS----DEYEQGIINVIQEKLD 350 (511)
T ss_pred ecCCcCCCCCeEEeeccCcccCcchh--HHHHHhc----CCCeEEeeccccccceeeeCc----HHHHHHHHHHHHHHHH
Confidence 46664 567899999987432 32 2344444 22 345567765555555433 2234456666666556
Q ss_pred hcCCCCCcEEEEEechhhhhhhhhhhccCCcceeeecCCCCCccCC--CCCCCCCCccc--hhhhHHhhhcCC
Q psy545 180 NYGLNPADVHMIGHSLGAHTAGYAGQAIEGLGRITGLDPAEPYFQG--MPPFARLDPTD--ADLVDVIHTDGS 248 (531)
Q Consensus 180 ~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~V~RItgLDPAgP~F~~--~~~~~rLd~sD--A~fVDvIHTd~~ 248 (531)
.+|++.+++.|-|-|||..=|.|.|..+.- ..|+. +.|+..- .....||.+.+ ..-.|+.|..++
T Consensus 351 ~LgF~~~qLILSGlSMGTfgAlYYga~l~P-~AIiV---gKPL~NLGtiA~n~rL~RP~~F~TslDvl~~~~g 419 (511)
T TIGR03712 351 YLGFDHDQLILSGLSMGTFGALYYGAKLSP-HAIIV---GKPLVNLGTIASRMRLDRPDEFGTALDILLLNTG 419 (511)
T ss_pred HhCCCHHHeeeccccccchhhhhhcccCCC-ceEEE---cCcccchhhhhccccccCCCCCchHHHhHHhhcC
Confidence 789999999999999999999988777652 11111 3344321 12345666544 356677766654
No 229
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=65.46 E-value=6.7 Score=40.81 Aligned_cols=26 Identities=31% Similarity=0.455 Sum_probs=23.0
Q ss_pred CCCCcEEEEEechhhhhhhhhhhccC
Q psy545 183 LNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 183 ~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
++-.++-|-||||||.+|..+|..+.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 36689999999999999999998865
No 230
>KOG4540|consensus
Probab=65.46 E-value=6.7 Score=40.81 Aligned_cols=26 Identities=31% Similarity=0.455 Sum_probs=23.0
Q ss_pred CCCCcEEEEEechhhhhhhhhhhccC
Q psy545 183 LNPADVHMIGHSLGAHTAGYAGQAIE 208 (531)
Q Consensus 183 ~~~~~vhLIGHSLGAhVAg~ag~~~~ 208 (531)
++-.++-|-||||||.+|..+|..+.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 36689999999999999999998865
No 231
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=63.57 E-value=65 Score=36.38 Aligned_cols=102 Identities=20% Similarity=0.177 Sum_probs=64.2
Q ss_pred CCCCCceEEEE-----ccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHh
Q psy545 106 FDPKKKTKFII-----HGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDN 180 (531)
Q Consensus 106 fn~~~ptvviI-----HGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~ 180 (531)
.++.++++|+| ||=+=.+... -.++--+|- .|+-|..|.+.....+ ...+..|....+.|++.+.+.
T Consensus 64 ~d~~krP~vViDPRAGHGpGIGGFK~-dSevG~AL~--~GHPvYFV~F~p~P~p-----gQTl~DV~~ae~~Fv~~V~~~ 135 (581)
T PF11339_consen 64 VDPTKRPFVVIDPRAGHGPGIGGFKP-DSEVGVALR--AGHPVYFVGFFPEPEP-----GQTLEDVMRAEAAFVEEVAER 135 (581)
T ss_pred CCCCCCCeEEeCCCCCCCCCccCCCc-ccHHHHHHH--cCCCeEEEEecCCCCC-----CCcHHHHHHHHHHHHHHHHHh
Confidence 45566666666 5522111111 234555553 4888999988654322 234566778888999888764
Q ss_pred cCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeec
Q psy545 181 YGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGL 216 (531)
Q Consensus 181 ~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgL 216 (531)
+. +..++.|||-.-||..+..++...++ ++-|+.-
T Consensus 136 hp-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvla 171 (581)
T PF11339_consen 136 HP-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLA 171 (581)
T ss_pred CC-CCCCceEEeccHHHHHHHHHHhcCcCccCceeec
Confidence 43 23499999999999988765555554 7766653
No 232
>KOG2029|consensus
Probab=62.62 E-value=16 Score=41.44 Aligned_cols=61 Identities=20% Similarity=0.264 Sum_probs=38.8
Q ss_pred CCeEEEEEeCCCCCC--CchhhhcccHHHHHHHHHHHHHHHHHhcCCC-CCcEEEEEechhhhhh
Q psy545 139 SDWNVIVVDWAGGSL--PLYTQATANTRLVGLELAYFVNYLKDNYGLN-PADVHMIGHSLGAHTA 200 (531)
Q Consensus 139 ~d~NVI~VDw~g~~~--~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~-~~~vhLIGHSLGAhVA 200 (531)
++.++|.+++...-. ..|-.+....+.++...-.|++.|. +.++. -..|.-|||||||-.|
T Consensus 477 p~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~-~~~VG~~RPivwI~HSmGGLl~ 540 (697)
T KOG2029|consen 477 PKSRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQ-AAGVGDDRPIVWIGHSMGGLLA 540 (697)
T ss_pred ccceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHH-HhccCCCCceEEEecccchHHH
Confidence 467888888765322 1232333344555556667777775 35655 5678999999999654
No 233
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=62.19 E-value=5.6 Score=31.90 Aligned_cols=23 Identities=30% Similarity=0.706 Sum_probs=13.3
Q ss_pred CCCCCCceEEEEccCCCCCCchhH
Q psy545 105 NFDPKKKTKFIIHGFIDTPLSSWV 128 (531)
Q Consensus 105 ~fn~~~ptvviIHGw~~s~~~~w~ 128 (531)
.-...+|+|++.||..+++ ..|+
T Consensus 38 ~~~~~k~pVll~HGL~~ss-~~wv 60 (63)
T PF04083_consen 38 NQNKKKPPVLLQHGLLQSS-DDWV 60 (63)
T ss_dssp TTTTT--EEEEE--TT--G-GGGC
T ss_pred ccCCCCCcEEEECCcccCh-HHHH
Confidence 4677899999999999887 4675
No 234
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=54.72 E-value=37 Score=33.38 Aligned_cols=82 Identities=9% Similarity=0.157 Sum_probs=45.6
Q ss_pred eEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCcEEEE
Q psy545 112 TKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPADVHMI 191 (531)
Q Consensus 112 tvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~vhLI 191 (531)
++|+|=||.+... .-+.+-.+.+.+ .|++++.+=-+..... ++. ..++.+ +..+++.+.+........+.+-
T Consensus 1 plvvl~gW~gA~~-~hl~KY~~~Y~~-~g~~il~~~~~~~~~~-~~~--~~~~~~---~~~l~~~l~~~~~~~~~~il~H 72 (240)
T PF05705_consen 1 PLVVLLGWMGAKP-KHLAKYSDLYQD-PGFDILLVTSPPADFF-WPS--KRLAPA---ADKLLELLSDSQSASPPPILFH 72 (240)
T ss_pred CEEEEEeCCCCCH-HHHHHHHHHHHh-cCCeEEEEeCCHHHHe-eec--cchHHH---HHHHHHHhhhhccCCCCCEEEE
Confidence 4788899997663 345555555544 7999999864432111 111 223333 3334444433211112389999
Q ss_pred Eechhhhhhh
Q psy545 192 GHSLGAHTAG 201 (531)
Q Consensus 192 GHSLGAhVAg 201 (531)
.+|.||-...
T Consensus 73 ~FSnGG~~~~ 82 (240)
T PF05705_consen 73 SFSNGGSFLY 82 (240)
T ss_pred EEECchHHHH
Confidence 9999665543
No 235
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=54.59 E-value=20 Score=39.38 Aligned_cols=66 Identities=17% Similarity=0.069 Sum_probs=40.1
Q ss_pred CeEEEEEeCCCCCCCchhhh----cccHHHHHHHHHHHHHHHHHhc-CCCCCcEEEEEechhhhhhhhhhhc
Q psy545 140 DWNVIVVDWAGGSLPLYTQA----TANTRLVGLELAYFVNYLKDNY-GLNPADVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 140 d~NVI~VDw~g~~~~~Y~~a----~~n~r~Vg~~la~~I~~L~~~~-g~~~~~vhLIGHSLGAhVAg~ag~~ 206 (531)
..|||-||-+-+..-.|... ..+.. .++++..||+...+.+ .+...+++|.|.|.|||-+-.++..
T Consensus 115 ~anllfiDqPvGtGfSy~~~~~~~~~d~~-~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~ 185 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKTPIDKTGDIS-EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 185 (433)
T ss_pred cCcEEEecCCCCCCccCCCCCCCccCCHH-HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHH
Confidence 47999999876543333221 12223 3356666665443332 2345789999999999976654443
No 236
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=52.39 E-value=8.4 Score=34.41 Aligned_cols=18 Identities=17% Similarity=0.359 Sum_probs=9.6
Q ss_pred CCCCCceEEEEccCCCCC
Q psy545 106 FDPKKKTKFIIHGFIDTP 123 (531)
Q Consensus 106 fn~~~ptvviIHGw~~s~ 123 (531)
-+++..+++|+|||.+|-
T Consensus 88 ~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 88 KRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp S-TT-EEEEEE--SS--G
T ss_pred CCCCCeEEEEECCCCccH
Confidence 355667899999999985
No 237
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=51.13 E-value=34 Score=35.71 Aligned_cols=64 Identities=19% Similarity=0.117 Sum_probs=39.7
Q ss_pred eEEEEEeCCCCCCCchhhh----cccHHHHHHHHHHHHHHHHHhc-CCCCCcEEEEEechhhhhhhhhhh
Q psy545 141 WNVIVVDWAGGSLPLYTQA----TANTRLVGLELAYFVNYLKDNY-GLNPADVHMIGHSLGAHTAGYAGQ 205 (531)
Q Consensus 141 ~NVI~VDw~g~~~~~Y~~a----~~n~r~Vg~~la~~I~~L~~~~-g~~~~~vhLIGHSLGAhVAg~ag~ 205 (531)
.|||-+|-+-+....|... ..+...+ .++-.+|+.+.+.+ .+...++||.|-|-|||-+=.++.
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~ 70 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 70 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHH
Confidence 5899999996544334321 2223333 66666665544333 345688999999999996554443
No 238
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=50.20 E-value=59 Score=31.88 Aligned_cols=68 Identities=18% Similarity=0.261 Sum_probs=43.3
Q ss_pred cCCCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCC--CCCC---Cchhhh--cccHHHHHHHHHHH
Q psy545 104 SNFDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWA--GGSL---PLYTQA--TANTRLVGLELAYF 173 (531)
Q Consensus 104 s~fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~--g~~~---~~Y~~a--~~n~r~Vg~~la~~ 173 (531)
......++.+|++-|..+++.+.-...+.+.|. ..|++|+++|=- .++. ..|..+ ..|++.|| .+|++
T Consensus 16 ~~~~~~~~~viW~TGLSGsGKSTiA~ale~~L~-~~G~~~y~LDGDnvR~gL~~dLgFs~edR~eniRRva-evAkl 90 (197)
T COG0529 16 EALKGQKGAVIWFTGLSGSGKSTIANALEEKLF-AKGYHVYLLDGDNVRHGLNRDLGFSREDRIENIRRVA-EVAKL 90 (197)
T ss_pred HHHhCCCCeEEEeecCCCCCHHHHHHHHHHHHH-HcCCeEEEecChhHhhcccCCCCCChHHHHHHHHHHH-HHHHH
Confidence 345667888999999999997655445555554 469999999843 2221 223322 45777776 44444
No 239
>KOG2182|consensus
Probab=49.87 E-value=1.2e+02 Score=33.95 Aligned_cols=113 Identities=13% Similarity=0.184 Sum_probs=70.4
Q ss_pred CCCCceEEEEccC-CCCCCchhHHHH---HHHHhcCCCeEEEEEeCCCCCCCc-hh-hhcc-----cHHHHHHHHHHHHH
Q psy545 107 DPKKKTKFIIHGF-IDTPLSSWVKEM---RRELLKHSDWNVIVVDWAGGSLPL-YT-QATA-----NTRLVGLELAYFVN 175 (531)
Q Consensus 107 n~~~ptvviIHGw-~~s~~~~w~~~l---~~aLL~~~d~NVI~VDw~g~~~~~-Y~-~a~~-----n~r~Vg~~la~~I~ 175 (531)
.++.|..++|-|= ..+ ..|+... ...+.++-|.-|+.+..|-.|.+. .. .+.. .....-++||.||+
T Consensus 83 ~~~gPiFLmIGGEgp~~--~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPES--DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred cCCCceEEEEcCCCCCC--CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 5778877777772 222 1232110 011223348899999999777431 11 1122 23455679999999
Q ss_pred HHHHhcCCCCC-cEEEEEechhhhhhhhhhhccCC--cceeeecCCCCCccC
Q psy545 176 YLKDNYGLNPA-DVHMIGHSLGAHTAGYAGQAIEG--LGRITGLDPAEPYFQ 224 (531)
Q Consensus 176 ~L~~~~g~~~~-~vhLIGHSLGAhVAg~ag~~~~~--V~RItgLDPAgP~F~ 224 (531)
.|..+++...+ +....|-|.-|.+|.++-..++. ++. +...+|...
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~Gs---vASSapv~A 209 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGS---VASSAPVLA 209 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheee---cccccceeE
Confidence 99877766544 89999999999998887776665 222 344555543
No 240
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=46.08 E-value=82 Score=30.11 Aligned_cols=67 Identities=15% Similarity=0.206 Sum_probs=42.5
Q ss_pred EEEEccCCCCCCchhHHHHHHHHhcC---CCeEEEEEeCCCCCCCchhh--------hcccHHHHHHHHHHHHHHHHH
Q psy545 113 KFIIHGFIDTPLSSWVKEMRRELLKH---SDWNVIVVDWAGGSLPLYTQ--------ATANTRLVGLELAYFVNYLKD 179 (531)
Q Consensus 113 vviIHGw~~s~~~~w~~~l~~aLL~~---~d~NVI~VDw~g~~~~~Y~~--------a~~n~r~Vg~~la~~I~~L~~ 179 (531)
-++|-|=++++.+.++..+...++.. .+..++++|..+.....|.. ...+...+.+.+..+++.+.+
T Consensus 40 h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~em~~ 117 (205)
T PF01580_consen 40 HLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVAVATDPEEILRLLEELVEEMER 117 (205)
T ss_dssp SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S-B-SHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccccccccHHHHHHHHHHHHHHHHH
Confidence 57889999999888888888777763 68999999998653222211 234566666666666665543
No 241
>KOG2170|consensus
Probab=45.77 E-value=21 Score=37.67 Aligned_cols=30 Identities=30% Similarity=0.442 Sum_probs=22.6
Q ss_pred CCCCCceEEEEccCCCCCCchhHHHHHHHHh
Q psy545 106 FDPKKKTKFIIHGFIDTPLSSWVKEMRRELL 136 (531)
Q Consensus 106 fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL 136 (531)
=++.+|.++=+|||+|++. +++..|...-+
T Consensus 105 ~~p~KPLvLSfHG~tGTGK-N~Va~iiA~n~ 134 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTGK-NYVAEIIAENL 134 (344)
T ss_pred CCCCCCeEEEecCCCCCch-hHHHHHHHHHH
Confidence 3588999999999999995 66666544433
No 242
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=43.94 E-value=1.2e+02 Score=34.94 Aligned_cols=99 Identities=17% Similarity=0.123 Sum_probs=65.2
Q ss_pred CCCCCceEEEEccCCC---CCCchhHHHHHHHHhcCCCeEEEEEeCCCCCC--Cchhhhc--ccHHHHHHHHHHHHHHHH
Q psy545 106 FDPKKKTKFIIHGFID---TPLSSWVKEMRRELLKHSDWNVIVVDWAGGSL--PLYTQAT--ANTRLVGLELAYFVNYLK 178 (531)
Q Consensus 106 fn~~~ptvviIHGw~~---s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~--~~Y~~a~--~n~r~Vg~~la~~I~~L~ 178 (531)
.+ ..||++ |||++ +-...+...+ ...|++ |.-.+.-+.||+|. +.+-+|+ .|-..|-.+.+...+.|.
T Consensus 418 ~d-~~pTll--~aYGGF~vsltP~fs~~~-~~WLer-Gg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi 492 (648)
T COG1505 418 KD-ENPTLL--YAYGGFNISLTPRFSGSR-KLWLER-GGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLI 492 (648)
T ss_pred CC-CCceEE--EeccccccccCCccchhh-HHHHhc-CCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHH
Confidence 45 567644 66654 2233444445 678886 55566678888875 3444443 344566777777788887
Q ss_pred HhcCCCCCcEEEEEechhhhhhhhhhhccCC
Q psy545 179 DNYGLNPADVHMIGHSLGAHTAGYAGQAIEG 209 (531)
Q Consensus 179 ~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~ 209 (531)
++-=.+++++-+-|-|=||-+.|.+-.+.+.
T Consensus 493 ~rgitspe~lgi~GgSNGGLLvg~alTQrPe 523 (648)
T COG1505 493 KRGITSPEKLGIQGGSNGGLLVGAALTQRPE 523 (648)
T ss_pred HhCCCCHHHhhhccCCCCceEEEeeeccChh
Confidence 6433478999999999999998876554443
No 243
>PF11906 DUF3426: Protein of unknown function (DUF3426); InterPro: IPR021834 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.
Probab=43.75 E-value=2.5e+02 Score=25.55 Aligned_cols=73 Identities=12% Similarity=0.043 Sum_probs=48.8
Q ss_pred cceeEEEEEEcCCCCCccceeeeEEEEEEeCCCcee-eeecCCC--------CcccccCCceEEEEEeccCCCCceeEEE
Q psy545 378 RHHYRITLDLARPPRAETWVQGFMRVSLHSDNGVIR-NLDLTPN--------GYEKLEHGTSRSFVVTHPEDVGTINKVE 448 (531)
Q Consensus 378 ~~~y~v~i~~~~~~~~~~~~~g~~~i~L~g~~g~~~-~~~~~~~--------~~~~~~~~~~~s~l~~~~~dig~~~~v~ 448 (531)
...|.|+..+.|..+ ....-..++++|.|.+|+.- .-.+.|. ....+.||.+..|-+.....-.+....+
T Consensus 67 ~~~l~v~g~i~N~~~-~~~~~P~l~l~L~D~~g~~l~~r~~~P~~yl~~~~~~~~~l~pg~~~~~~~~~~~p~~~a~~~~ 145 (149)
T PF11906_consen 67 PGVLVVSGTIRNRAD-FPQALPALELSLLDAQGQPLARRVFTPADYLPPGLAAQAGLPPGESVPFRLRLEDPPPRAAGYR 145 (149)
T ss_pred CCEEEEEEEEEeCCC-CcccCceEEEEEECCCCCEEEEEEEChHHhcccccccccccCCCCeEEEEEEeeCCCCccceEE
Confidence 456888888888642 22344889999999999755 3333331 1235788888888888775555566666
Q ss_pred EEE
Q psy545 449 FYW 451 (531)
Q Consensus 449 l~w 451 (531)
+.|
T Consensus 146 v~~ 148 (149)
T PF11906_consen 146 VEF 148 (149)
T ss_pred EEE
Confidence 655
No 244
>PLN02209 serine carboxypeptidase
Probab=41.81 E-value=46 Score=36.64 Aligned_cols=64 Identities=17% Similarity=0.094 Sum_probs=39.1
Q ss_pred CeEEEEEeCCCCCCCchhh----hcccHHHHHHHHHHHHHHHHHhc-CCCCCcEEEEEechhhhhhhhhh
Q psy545 140 DWNVIVVDWAGGSLPLYTQ----ATANTRLVGLELAYFVNYLKDNY-GLNPADVHMIGHSLGAHTAGYAG 204 (531)
Q Consensus 140 d~NVI~VDw~g~~~~~Y~~----a~~n~r~Vg~~la~~I~~L~~~~-g~~~~~vhLIGHSLGAhVAg~ag 204 (531)
-.|++-+|-+-+..-.|.. ...+.. .++++.+||+...+.+ .+...+++|.|.|.|||-+-.++
T Consensus 117 ~anllfiDqPvGtGfSy~~~~~~~~~~~~-~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a 185 (437)
T PLN02209 117 TANIIFLDQPVGSGFSYSKTPIERTSDTS-EVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALV 185 (437)
T ss_pred cCcEEEecCCCCCCccCCCCCCCccCCHH-HHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHH
Confidence 4799999987654322322 122333 3467777766544333 23446899999999999554333
No 245
>KOG1202|consensus
Probab=38.47 E-value=63 Score=40.01 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=57.0
Q ss_pred CCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCC
Q psy545 106 FDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNP 185 (531)
Q Consensus 106 fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~ 185 (531)
-..+.|++||||-.-+... -+..++..| + + +.++. .++.++.. ..+-...+.+|+.+.+- -+.
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt--~l~~la~rl-e---~-------PaYgl-Q~T~~vP~-dSies~A~~yirqirkv--QP~ 2181 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTT--ALESLASRL-E---I-------PAYGL-QCTEAVPL-DSIESLAAYYIRQIRKV--QPE 2181 (2376)
T ss_pred hcccCCceEEEeccccchH--HHHHHHhhc-C---C-------cchhh-hccccCCc-chHHHHHHHHHHHHHhc--CCC
Confidence 5678899999998876542 233333322 1 1 11121 12222211 12223344567776542 156
Q ss_pred CcEEEEEechhhhhhhhhhhccC---CcceeeecCCCC
Q psy545 186 ADVHMIGHSLGAHTAGYAGQAIE---GLGRITGLDPAE 220 (531)
Q Consensus 186 ~~vhLIGHSLGAhVAg~ag~~~~---~V~RItgLDPAg 220 (531)
..-+|+|+|.||-+|-.++..++ +...++.||-+.
T Consensus 2182 GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2182 GPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred CCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 78899999999999987766554 255688888663
No 246
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=37.24 E-value=2e+02 Score=29.49 Aligned_cols=41 Identities=24% Similarity=0.287 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhcc
Q psy545 166 VGLELAYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAI 207 (531)
Q Consensus 166 Vg~~la~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 207 (531)
+.+.|.....+|.+.+ -+-++|.|.|+|=||.+|-..+..+
T Consensus 73 ~~~~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred hHHHHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHHHH
Confidence 3445555566676555 3568899999999999987665554
No 247
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=36.36 E-value=44 Score=37.15 Aligned_cols=40 Identities=28% Similarity=0.274 Sum_probs=36.5
Q ss_pred cCCCCCcEEEEEechhhhhhhhhhhccCC-cceeeecCCCC
Q psy545 181 YGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDPAE 220 (531)
Q Consensus 181 ~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDPAg 220 (531)
+|..++.-+..|-|-||+-+..++++++. ...|++-.||-
T Consensus 110 Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 110 YGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred hCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 67789999999999999999999999887 99999999984
No 248
>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis []. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents CobW-like proteins, including P47K (P31521 from SWISSPROT), a Pseudomonas chlororaphis protein needed for nitrile hydratase expression [], and urease accessory protein UreG, which acts as a chaperone in the activation of urease upon insertion of nickel into the active site [].; PDB: 2WSM_B 1NIJ_A 2HF9_A 2HF8_B.
Probab=36.17 E-value=32 Score=32.50 Aligned_cols=22 Identities=18% Similarity=0.475 Sum_probs=17.8
Q ss_pred eEEEEccCCCCCCchhHHHHHH
Q psy545 112 TKFIIHGFIDTPLSSWVKEMRR 133 (531)
Q Consensus 112 tvviIHGw~~s~~~~w~~~l~~ 133 (531)
++++|.||.|+++++.+..+..
T Consensus 1 Pv~ii~GfLGsGKTTli~~ll~ 22 (178)
T PF02492_consen 1 PVIIITGFLGSGKTTLINHLLK 22 (178)
T ss_dssp -EEEEEESTTSSHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHH
Confidence 4789999999998887777665
No 249
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=34.58 E-value=33 Score=34.25 Aligned_cols=15 Identities=33% Similarity=0.625 Sum_probs=13.0
Q ss_pred CCCcEEEEEechhhh
Q psy545 184 NPADVHMIGHSLGAH 198 (531)
Q Consensus 184 ~~~~vhLIGHSLGAh 198 (531)
+.+.|.++|||||--
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 569999999999964
No 250
>KOG1282|consensus
Probab=34.38 E-value=58 Score=36.09 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=44.4
Q ss_pred CeEEEEEeCCCCCCCchhhhc----ccHHHHHHHHHHHHH-HHHHhcCCCCCcEEEEEechhhhhhhhhh
Q psy545 140 DWNVIVVDWAGGSLPLYTQAT----ANTRLVGLELAYFVN-YLKDNYGLNPADVHMIGHSLGAHTAGYAG 204 (531)
Q Consensus 140 d~NVI~VDw~g~~~~~Y~~a~----~n~r~Vg~~la~~I~-~L~~~~g~~~~~vhLIGHSLGAhVAg~ag 204 (531)
-.|+|-+|-+-+..-.|.... .+-..+|+++-.|+. ++.+.-.+.-.+++|.|-|.+||..=.++
T Consensus 117 ~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La 186 (454)
T KOG1282|consen 117 EANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALA 186 (454)
T ss_pred cccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHH
Confidence 379999999977554454332 355667777777664 55443345668999999999998764433
No 251
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=34.12 E-value=57 Score=30.33 Aligned_cols=38 Identities=24% Similarity=0.606 Sum_probs=24.5
Q ss_pred CCceEEEEcc--CCCCC----------CchhHHHHHHH---------HhcCCCeEEEEE
Q psy545 109 KKKTKFIIHG--FIDTP----------LSSWVKEMRRE---------LLKHSDWNVIVV 146 (531)
Q Consensus 109 ~~ptvviIHG--w~~s~----------~~~w~~~l~~a---------LL~~~d~NVI~V 146 (531)
...++||+|| |.+.. .+-|+..+... -|++.|+.|++|
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 4568999999 54321 24677665321 234579999988
No 252
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=34.08 E-value=1.1e+02 Score=33.79 Aligned_cols=103 Identities=18% Similarity=0.088 Sum_probs=73.6
Q ss_pred cCCCCCCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCc---hhhhcccHHHHHHHHHHHHHHHHHh
Q psy545 104 SNFDPKKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPL---YTQATANTRLVGLELAYFVNYLKDN 180 (531)
Q Consensus 104 s~fn~~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~---Y~~a~~n~r~Vg~~la~~I~~L~~~ 180 (531)
.+-+.++|||+..-||..+.. ....++. .|| +.|-|.|.+|-++.+. -...-..+...|.+...+++.|..-
T Consensus 57 lHk~~drPtV~~T~GY~~~~~-p~r~Ept-~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 57 LHKDFDRPTVLYTEGYNVSTS-PRRSEPT-QLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred EEcCCCCCeEEEecCcccccC-ccccchh-Hhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh
Confidence 345668899999999987653 2223443 354 6799999999876431 1123356788888988888888654
Q ss_pred cCCCCCcEEEEEechhhhhhhhhhhccCC-cceee
Q psy545 181 YGLNPADVHMIGHSLGAHTAGYAGQAIEG-LGRIT 214 (531)
Q Consensus 181 ~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RIt 214 (531)
+ ..+-.=-|-|=||+.|.|-=++++. |...+
T Consensus 132 Y---~~kWISTG~SKGGmTa~y~rrFyP~DVD~tV 163 (448)
T PF05576_consen 132 Y---PGKWISTGGSKGGMTAVYYRRFYPDDVDGTV 163 (448)
T ss_pred c---cCCceecCcCCCceeEEEEeeeCCCCCCeee
Confidence 3 4678889999999999998888876 54433
No 253
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=31.39 E-value=52 Score=32.03 Aligned_cols=38 Identities=34% Similarity=0.357 Sum_probs=31.3
Q ss_pred EEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCC
Q psy545 113 KFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAG 150 (531)
Q Consensus 113 vviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g 150 (531)
-+.|=|-+|++.+.-+..+...++...+..||++|+.|
T Consensus 25 H~~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 25 HIAIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 46778999999876677888888845689999999976
No 254
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=31.32 E-value=50 Score=36.88 Aligned_cols=77 Identities=18% Similarity=0.249 Sum_probs=45.7
Q ss_pred CeEEEEEeCCCC-CCCc--hhhhcccHHHHHHHHHHHHHHHHHh---cCCCCCcEEEEEechhhhhhh-hhhhccCC---
Q psy545 140 DWNVIVVDWAGG-SLPL--YTQATANTRLVGLELAYFVNYLKDN---YGLNPADVHMIGHSLGAHTAG-YAGQAIEG--- 209 (531)
Q Consensus 140 d~NVI~VDw~g~-~~~~--Y~~a~~n~r~Vg~~la~~I~~L~~~---~g~~~~~vhLIGHSLGAhVAg-~ag~~~~~--- 209 (531)
..++|-+|.+-+ |.+. -.....++..+++++-.+.+.+.+. ++-..++.||+|-|.|||=+- +|......
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred CCceEEEecCcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 368999996643 2221 2234556666777777666655443 222357999999999999554 44443332
Q ss_pred cceeeec
Q psy545 210 LGRITGL 216 (531)
Q Consensus 210 V~RItgL 216 (531)
+++++.|
T Consensus 226 ~~~~~nl 232 (498)
T COG2939 226 LNGNVNL 232 (498)
T ss_pred cCCceEe
Confidence 4444443
No 255
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=31.02 E-value=1.2e+02 Score=32.15 Aligned_cols=83 Identities=18% Similarity=0.204 Sum_probs=58.2
Q ss_pred CCceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCC-CCCCchhhhcccHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy545 109 KKKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAG-GSLPLYTQATANTRLVGLELAYFVNYLKDNYGLNPAD 187 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g-~~~~~Y~~a~~n~r~Vg~~la~~I~~L~~~~g~~~~~ 187 (531)
...-+|++-|=++|+.+.-+..|++.+-+....++|.+.=+- +-.. -..+.-|-|.||.+...|-+.|...+.-+ -+
T Consensus 123 ~~~GLILVTGpTGSGKSTTlAamId~iN~~~~~HIlTIEDPIE~vh~-skkslI~QREvG~dT~sF~~aLraALReD-PD 200 (353)
T COG2805 123 SPRGLILVTGPTGSGKSTTLAAMIDYINKHKAKHILTIEDPIEYVHE-SKKSLINQREVGRDTLSFANALRAALRED-PD 200 (353)
T ss_pred CCCceEEEeCCCCCcHHHHHHHHHHHHhccCCcceEEecCchHhhhc-chHhhhhHHHhcccHHHHHHHHHHHhhcC-CC
Confidence 344589999999999877777888876665667788775331 1111 12345577999999999999887665534 46
Q ss_pred EEEEEe
Q psy545 188 VHMIGH 193 (531)
Q Consensus 188 vhLIGH 193 (531)
|.|||-
T Consensus 201 VIlvGE 206 (353)
T COG2805 201 VILVGE 206 (353)
T ss_pred EEEEec
Confidence 889985
No 256
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=29.66 E-value=4.4e+02 Score=28.34 Aligned_cols=31 Identities=26% Similarity=0.266 Sum_probs=21.9
Q ss_pred HHHHHHHHhcCCCCCcEEEEEechhhhhhhhh
Q psy545 172 YFVNYLKDNYGLNPADVHMIGHSLGAHTAGYA 203 (531)
Q Consensus 172 ~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~a 203 (531)
....+|++.+. +-++|++.|+|-||.+|-..
T Consensus 109 ~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVl 139 (423)
T COG3673 109 EAYRFLIFNYE-PGDEIYAFGFSRGAFSARVL 139 (423)
T ss_pred HHHHHHHHhcC-CCCeEEEeeccchhHHHHHH
Confidence 33445554443 56899999999999988643
No 257
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=29.53 E-value=2.9e+02 Score=30.30 Aligned_cols=97 Identities=25% Similarity=0.274 Sum_probs=60.6
Q ss_pred EEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCCCCCCchh----h------------hc-------ccHHHHHHHH
Q psy545 114 FIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAGGSLPLYT----Q------------AT-------ANTRLVGLEL 170 (531)
Q Consensus 114 viIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g~~~~~Y~----~------------a~-------~n~r~Vg~~l 170 (531)
|+|=|-.++.... +..+++.+. ..|.+|+.+|-.-.+.+... + +. .-+...++.+
T Consensus 4 I~iigT~DTK~~E-~~yl~~~i~-~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 4 IAIIGTLDTKGEE-LLYLRDQIE-AQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEEccCCCHHH-HHHHHHHHH-HCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 4445666665332 344555444 46999999999765432221 0 00 1123445556
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEechhhhhhhhhhhccC-Ccceee
Q psy545 171 AYFVNYLKDNYGLNPADVHMIGHSLGAHTAGYAGQAIE-GLGRIT 214 (531)
Q Consensus 171 a~~I~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~-~V~RIt 214 (531)
+.++..|.++ | ..+-|.=+|-|.|..+|..+-+.++ |+.++.
T Consensus 82 ~~~v~~l~~~-g-~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlm 124 (403)
T PF06792_consen 82 ARFVSDLYDE-G-KIDGVIGIGGSGGTALATAAMRALPIGFPKLM 124 (403)
T ss_pred HHHHHHHHhc-C-CccEEEEecCCccHHHHHHHHHhCCCCCCeEE
Confidence 6666666543 2 4678899999999999998888877 566654
No 258
>PF03283 PAE: Pectinacetylesterase
Probab=28.14 E-value=80 Score=33.89 Aligned_cols=55 Identities=22% Similarity=0.279 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhcCC-CCCcEEEEEechhhhhhhhhhh----ccCCcceeeecCCCCCccCC
Q psy545 170 LAYFVNYLKDNYGL-NPADVHMIGHSLGAHTAGYAGQ----AIEGLGRITGLDPAEPYFQG 225 (531)
Q Consensus 170 la~~I~~L~~~~g~-~~~~vhLIGHSLGAhVAg~ag~----~~~~V~RItgLDPAgP~F~~ 225 (531)
+..+|++|... |+ +.++|.|.|-|.||.-+.+-.. .++.-.++.++.=+|..+..
T Consensus 140 ~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 140 LRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred HHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccc
Confidence 33456666654 44 4799999999999987765443 34433467777777777654
No 259
>KOG1551|consensus
Probab=27.66 E-value=60 Score=33.77 Aligned_cols=35 Identities=17% Similarity=0.382 Sum_probs=26.6
Q ss_pred CCCcEEEEEechhhhhhhhhhhccCC-cceeeecCC
Q psy545 184 NPADVHMIGHSLGAHTAGYAGQAIEG-LGRITGLDP 218 (531)
Q Consensus 184 ~~~~vhLIGHSLGAhVAg~ag~~~~~-V~RItgLDP 218 (531)
...++.|.|-||||-+|..+|...+. |.-+--|.|
T Consensus 193 g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~ 228 (371)
T KOG1551|consen 193 GLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNS 228 (371)
T ss_pred CcccceeeeeecccHHHHhhcccCCCCccccccccc
Confidence 46789999999999999999987665 544433433
No 260
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=26.00 E-value=84 Score=31.76 Aligned_cols=26 Identities=35% Similarity=0.721 Sum_probs=19.1
Q ss_pred HhcCCCCCcEEEEEechhhhhhhhhhhc
Q psy545 179 DNYGLNPADVHMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 179 ~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 206 (531)
...|+.+ -.++|||+|-..|.+++..
T Consensus 77 ~~~Gi~p--~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 77 RSWGVRP--DAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHcCCcc--cEEEecCHHHHHHHHHhCC
Confidence 3567655 4899999999888876543
No 261
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=23.80 E-value=94 Score=31.76 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=29.1
Q ss_pred EEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeCCC
Q psy545 113 KFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDWAG 150 (531)
Q Consensus 113 vviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw~g 150 (531)
+|.|-|=++++.+.....+...|+++.+++|++||--.
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDaDp 39 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDADP 39 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 67888999998755444447778887779999999765
No 262
>smart00037 CNX Connexin homologues. Connexin channels participate in the regulation of signaling between developing and differentiated cell types.
Probab=22.51 E-value=49 Score=23.49 Aligned_cols=8 Identities=50% Similarity=1.244 Sum_probs=6.3
Q ss_pred CCCCCCCC
Q psy545 272 KEQPGCDL 279 (531)
Q Consensus 272 ~~QPGC~~ 279 (531)
..||||..
T Consensus 14 T~QPGC~n 21 (34)
T smart00037 14 TQQPGCEN 21 (34)
T ss_pred CCCCCccc
Confidence 57999964
No 263
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=22.22 E-value=1.6e+02 Score=30.82 Aligned_cols=18 Identities=39% Similarity=0.198 Sum_probs=14.4
Q ss_pred EEEEechhhhhhhhhhhc
Q psy545 189 HMIGHSLGAHTAGYAGQA 206 (531)
Q Consensus 189 hLIGHSLGAhVAg~ag~~ 206 (531)
.++|||+|=..|.+++-.
T Consensus 127 ~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGA 144 (343)
T ss_pred eeeeccHHHHHHHHHhCC
Confidence 689999999888875543
No 264
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=21.10 E-value=1.2e+02 Score=28.71 Aligned_cols=38 Identities=16% Similarity=0.260 Sum_probs=26.9
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeC
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDW 148 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw 148 (531)
++.+|+|-|..+++.+.--..+...|.+ .+.+|+.+|=
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~-~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFA-RGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHH-TTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHH-cCCcEEEecC
Confidence 5789999999999976544555555544 5899999984
No 265
>PRK00889 adenylylsulfate kinase; Provisional
Probab=20.24 E-value=1.5e+02 Score=27.57 Aligned_cols=38 Identities=13% Similarity=0.268 Sum_probs=27.9
Q ss_pred CceEEEEccCCCCCCchhHHHHHHHHhcCCCeEEEEEeC
Q psy545 110 KKTKFIIHGFIDTPLSSWVKEMRRELLKHSDWNVIVVDW 148 (531)
Q Consensus 110 ~ptvviIHGw~~s~~~~w~~~l~~aLL~~~d~NVI~VDw 148 (531)
++.+|+|.|+.+++.+.....+...+ ...+..|+.+|-
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l-~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKL-REAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH-HHcCCeEEEEcC
Confidence 45588999999999877766666555 345677888864
No 266
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=20.23 E-value=2.9e+02 Score=26.11 Aligned_cols=42 Identities=26% Similarity=0.233 Sum_probs=24.4
Q ss_pred CCceEEEEccCCCCCC-chhHHHHHHHHhcCCCeEEEEEeCCCC
Q psy545 109 KKKTKFIIHGFIDTPL-SSWVKEMRRELLKHSDWNVIVVDWAGG 151 (531)
Q Consensus 109 ~~ptvviIHGw~~s~~-~~w~~~l~~aLL~~~d~NVI~VDw~g~ 151 (531)
..++++|+||-.+..- ..-...+..+|.+. +.++-.+-.++.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~-g~~~~~~~~p~~ 185 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA-GKPVELLIFPGE 185 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT-TSSEEEEEETT-
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc-CCCEEEEEcCcC
Confidence 5678999999877642 12244566666543 544444444443
Done!