BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5450
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QZQ1|AFAD_MOUSE Afadin OS=Mus musculus GN=Mllt4 PE=1 SV=3
Length = 1820
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 81/132 (61%), Gaps = 9/132 (6%)
Query: 1 MRRRRQQKLEQKLQQFRSKDGGPDTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEM 60
M+RRRQQKLE+++Q+FRS DG PD+GGTL+IY +SL ++PYKT+LLS D A V E
Sbjct: 222 MKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVAES 281
Query: 61 LAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQREYILDEDECPLAILMNH 120
L KYGL +E+ YC+ +V +P + + G +E ILD+DECPL I
Sbjct: 282 LEKYGLEKENPKDYCIARV--MLPPGAQHSDERGA-------KEIILDDDECPLQIFREW 332
Query: 121 PQSRESRTIQFK 132
P + Q K
Sbjct: 333 PSDKGILVFQLK 344
>sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3
Length = 1824
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 81/132 (61%), Gaps = 9/132 (6%)
Query: 1 MRRRRQQKLEQKLQQFRSKDGGPDTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEM 60
M+RRRQQKLE+++Q+FRS DG PD+GGTL+IY +SL ++PYKT+LLS D A V E
Sbjct: 222 MKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEA 281
Query: 61 LAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQREYILDEDECPLAILMNH 120
L KYGL +E+ YC+ +V +P + + G +E ILD+DECPL I
Sbjct: 282 LEKYGLEKENPKDYCIARV--MLPPGAQHSDEKGA-------KEIILDDDECPLQIFREW 332
Query: 121 PQSRESRTIQFK 132
P + Q K
Sbjct: 333 PSDKGILVFQLK 344
>sp|O35889|AFAD_RAT Afadin OS=Rattus norvegicus GN=Mllt4 PE=1 SV=1
Length = 1829
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 81/132 (61%), Gaps = 9/132 (6%)
Query: 1 MRRRRQQKLEQKLQQFRSKDGGPDTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEM 60
M+RRRQQKLE+++Q+FRS DG PD+GGTL+IY +SL ++PYKT+LLS D A V E
Sbjct: 222 MKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAES 281
Query: 61 LAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQREYILDEDECPLAILMNH 120
L KYGL +E+ YC+ +V +P + + G +E ILD+DECPL I
Sbjct: 282 LEKYGLEKENPKDYCIARV--MLPPGAQHSDERGA-------KEIILDDDECPLQIFREW 332
Query: 121 PQSRESRTIQFK 132
P + Q K
Sbjct: 333 PSDKGILVFQLK 344
>sp|Q69Z89|RADIL_MOUSE Ras-associating and dilute domain-containing protein OS=Mus
musculus GN=Radil PE=1 SV=2
Length = 1099
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPET 86
G LK++G+S+C YK++L + +A ++VKE L +Y L E A QY L V ++
Sbjct: 92 GVLKVFGDSVCTGTHYKSVLATGSSSAQELVKEALERYALDPECAGQYVLCDVVGQAGDS 151
Query: 87 PNTAQQNGGDQFMNNQREYILDE 109
Q F +N++ ++ E
Sbjct: 152 GQRWQAQCFRVFGDNEKPLLIQE 174
>sp|Q96JH8|RADIL_HUMAN Ras-associating and dilute domain-containing protein OS=Homo
sapiens GN=RADIL PE=1 SV=5
Length = 1075
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQV 79
G LK++G+S+C YK++L + +A ++VKE L +Y L A QY L V
Sbjct: 63 GVLKVFGDSVCTGTHYKSVLATGTSSARELVKEALERYALDPRQAGQYVLCDV 115
>sp|A7UA95|RADIL_DANRE Ras-associating and dilute domain-containing protein OS=Danio rerio
GN=radil PE=2 SV=1
Length = 1124
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQV 79
G LKI+G+ + YK++L + R +A +++KE L +Y L + A + L V
Sbjct: 63 GVLKIFGDEISAGANYKSVLATPRSSAQELIKEALERYSLNKTSACNFVLCDV 115
>sp|Q5U651|RAIN_HUMAN Ras-interacting protein 1 OS=Homo sapiens GN=RASIP1 PE=1 SV=1
Length = 963
Score = 37.0 bits (84), Expect = 0.031, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGL 66
G LKI+G L YK++L + R A ++V E L +YGL
Sbjct: 146 GVLKIFGAGLASGANYKSVLATARSTARELVAEALERYGL 185
>sp|Q9LNE6|U89C1_ARATH UDP-glycosyltransferase 89C1 OS=Arabidopsis thaliana GN=UGT89C1
PE=2 SV=1
Length = 435
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 8 KLEQKLQQFRSKDGGPDTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLT 67
KL ++ ++D PD+ +I ES D+P + L+ +R+ A + +KE + Y
Sbjct: 367 KLRAAVRVGENRDSVPDSDKLARILAESAREDLPERVTLMKLREKAMEAIKEGGSSYKNL 426
Query: 68 REDAHQYCL 76
E + CL
Sbjct: 427 DELVAEMCL 435
>sp|Q3U0S6|RAIN_MOUSE Ras-interacting protein 1 OS=Mus musculus GN=Rasip1 PE=1 SV=3
Length = 961
Score = 36.2 bits (82), Expect = 0.062, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLT 67
G LKI+ L YK++L + R A ++V E L +YGLT
Sbjct: 143 GVLKIFASGLASGANYKSVLATERSTARELVAEALERYGLT 183
>sp|Q60695|RGL1_MOUSE Ral guanine nucleotide dissociation stimulator-like 1 OS=Mus
musculus GN=Rgl1 PE=1 SV=2
Length = 768
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 42 YKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT-----AIPETPNT 89
YK+++L+ +D V++ ++K+ L + A +Y LVQV + IP++ N
Sbjct: 664 YKSIMLTSQDKTPAVIQRAMSKHNLESDPAEEYELVQVISEDKELVIPDSANV 716
>sp|Q9NZL6|RGL1_HUMAN Ral guanine nucleotide dissociation stimulator-like 1 OS=Homo
sapiens GN=RGL1 PE=2 SV=1
Length = 768
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 42 YKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT-----AIPETPN 88
YK+++L+ +D V++ + K+ L + A +Y LVQV + IP++ N
Sbjct: 664 YKSIMLTSQDKTPAVIQRAMLKHNLDSDPAEEYELVQVISEDKELVIPDSAN 715
>sp|Q03385|GNDS_MOUSE Ral guanine nucleotide dissociation stimulator OS=Mus musculus
GN=Ralgds PE=1 SV=2
Length = 852
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 42 YKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT-----AIPETPNT 89
YK++L++ +D A V+++ + K+ L ++ Y LVQ+ + IPE N
Sbjct: 752 YKSILVTSQDKAPTVIRKAMDKHNLDEDEPEDYELVQIISEDHKLKIPENANV 804
>sp|Q6P112|RGL1_DANRE Ral guanine nucleotide dissociation stimulator-like 1 OS=Danio
rerio GN=rgl1 PE=2 SV=1
Length = 804
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 42 YKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT-----AIPETPNT 89
YK+++L+ +D V+ + K+ L E A Y LVQV + IP+ N
Sbjct: 700 YKSIMLTSQDKTPAVISRAMTKHNLEGEQAADYELVQVISEERELVIPDNANV 752
>sp|A7TIQ0|S2538_VANPO Solute carrier family 25 member 38 homolog OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294)
GN=Kpol_1043p32 PE=3 SV=1
Length = 298
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPET 86
G + +G +L RD PY + + + + A +VV ++L + + D H L +T + T
Sbjct: 160 GFFRGFGPTLVRDAPYSGIYVLLYEKAKEVVPKLLPR-KFIKFDKHGSYLTSTSTLVNST 218
>sp|C1CPS7|FABH_STRZT 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Streptococcus
pneumoniae (strain Taiwan19F-14) GN=fabH PE=3 SV=1
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 48 SVRDNATQVVKEMLAKYGLTREDAHQYCLVQV--NTAIPETPNTAQQNGG 95
S D AT+V K+++AK G+T E+ L + ++ +P T Q N G
Sbjct: 50 STSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIG 99
>sp|C1CCI2|FABH_STRZJ 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Streptococcus
pneumoniae (strain JJA) GN=fabH PE=3 SV=1
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 48 SVRDNATQVVKEMLAKYGLTREDAHQYCLVQV--NTAIPETPNTAQQNGG 95
S D AT+V K+++AK G+T E+ L + ++ +P T Q N G
Sbjct: 50 STSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIG 99
>sp|P0A3C6|FABH_STRR6 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=fabH PE=3 SV=1
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 48 SVRDNATQVVKEMLAKYGLTREDAHQYCLVQV--NTAIPETPNTAQQNGG 95
S D AT+V K+++AK G+T E+ L + ++ +P T Q N G
Sbjct: 50 STSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIG 99
>sp|B2ILW2|FABH_STRPS 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Streptococcus
pneumoniae (strain CGSP14) GN=fabH PE=3 SV=1
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 48 SVRDNATQVVKEMLAKYGLTREDAHQYCLVQV--NTAIPETPNTAQQNGG 95
S D AT+V K+++AK G+T E+ L + ++ +P T Q N G
Sbjct: 50 STSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIG 99
>sp|P0A3C5|FABH_STRPN 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=fabH PE=3 SV=1
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 48 SVRDNATQVVKEMLAKYGLTREDAHQYCLVQV--NTAIPETPNTAQQNGG 95
S D AT+V K+++AK G+T E+ L + ++ +P T Q N G
Sbjct: 50 STSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIG 99
>sp|B8ZLI3|FABH_STRPJ 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Streptococcus
pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=fabH
PE=3 SV=1
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 48 SVRDNATQVVKEMLAKYGLTREDAHQYCLVQV--NTAIPETPNTAQQNGG 95
S D AT+V K+++AK G+T E+ L + ++ +P T Q N G
Sbjct: 50 STSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIG 99
>sp|B1I9L1|FABH_STRPI 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Streptococcus
pneumoniae (strain Hungary19A-6) GN=fabH PE=3 SV=1
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 48 SVRDNATQVVKEMLAKYGLTREDAHQYCLVQV--NTAIPETPNTAQQNGG 95
S D AT+V K+++AK G+T E+ L + ++ +P T Q N G
Sbjct: 50 STSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIG 99
>sp|C1C5F4|FABH_STRP7 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Streptococcus
pneumoniae (strain 70585) GN=fabH PE=3 SV=1
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 48 SVRDNATQVVKEMLAKYGLTREDAHQYCLVQV--NTAIPETPNTAQQNGG 95
S D AT+V K+++AK G+T E+ L + ++ +P T Q N G
Sbjct: 50 STSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIG 99
>sp|Q04M58|FABH_STRP2 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Streptococcus
pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=fabH
PE=3 SV=1
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 48 SVRDNATQVVKEMLAKYGLTREDAHQYCLVQV--NTAIPETPNTAQQNGG 95
S D AT+V K+++AK G+T E+ L + ++ +P T Q N G
Sbjct: 50 STSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIG 99
>sp|Q5ZIL4|STRBP_CHICK Spermatid perinuclear RNA-binding protein OS=Gallus gallus GN=STRBP
PE=2 SV=1
Length = 672
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 36 LCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPE--------TP 87
+C++ P KTLL V+DN ++++ + L E ++ ++ NT P+ +P
Sbjct: 107 MCKEKPTKTLLCIVKDNLPIQIQKLTEEKYLVEEHVNEAAIIIRNTKEPKLTLKVILTSP 166
Query: 88 ---NTAQQNGGDQFMNNQREYILDEDEC 112
+ A++ GD +LD +C
Sbjct: 167 LIRDEAEKKEGDSVAMKDPPDLLDRQKC 194
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,485,495
Number of Sequences: 539616
Number of extensions: 1894783
Number of successful extensions: 4820
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4803
Number of HSP's gapped (non-prelim): 26
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)