Query         psy5450
Match_columns 133
No_of_seqs    117 out of 145
Neff          5.6 
Searched_HMMs 29240
Date          Fri Aug 16 17:52:53 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy5450.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5450hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1wxa_A Afadin, AF-6 protein; R 100.0 2.3E-35 7.8E-40  213.2  12.6  105   19-132     2-106 (116)
  2 3ec8_A Putative uncharacterize 100.0 4.1E-30 1.4E-34  195.3   9.8   98   24-130    33-131 (166)
  3 2c5l_C Phosphoinositide-specif  99.8 3.5E-18 1.2E-22  123.7  11.4   95   25-132     6-105 (117)
  4 2bye_A Phospholipase C, epsilo  99.5 1.4E-13 4.6E-18   98.5  10.0   90   26-125     9-98  (110)
  5 1lfd_A Ralgds; RAL, effector i  99.1 1.6E-10 5.6E-15   79.3   6.2   46   37-82     13-58  (87)
  6 1rax_A Protein (RA-domain of R  99.1 4.1E-10 1.4E-14   80.8   7.3   55   27-82     29-83  (115)
  7 1rlf_A RLF, RLF-RBD; signal tr  99.0 3.2E-10 1.1E-14   78.3   5.9   56   27-82      6-61  (90)
  8 1ef5_A RGL; RAS-binding domain  98.9 4.5E-10 1.5E-14   79.3   3.7   55   27-82     19-73  (103)
  9 3kh0_A Ralgds, ralgef, RAL gua  98.9 1.6E-09 5.6E-14   79.9   6.4   55   27-82     26-80  (140)
 10 3ddc_B RAS association domain-  98.8 3.1E-08   1E-12   75.0   8.7   75   40-132    86-161 (163)
 11 2uwq_A Apoptosis-stimulating o  98.7 5.2E-08 1.8E-12   66.8   8.3   80   25-132     5-84  (86)
 12 1wgr_A Growth factor receptor-  98.6 3.5E-07 1.2E-11   64.2   9.9   79   24-126     7-85  (100)
 13 2cs4_A Protein C12ORF2; GTP bi  98.5 6.3E-07 2.1E-11   62.5   7.9   78   27-132     8-85  (95)
 14 3tca_A Amyloid beta A4 precurs  98.4   4E-06 1.4E-10   65.4  11.5   92    6-124    17-108 (291)
 15 4gmv_A RAS-associated and plec  98.0 4.2E-05 1.4E-09   62.0  10.3   95    5-126    13-107 (281)
 16 3hk0_A Growth factor receptor-  97.9 5.3E-05 1.8E-09   60.5   9.1   80   25-129     7-86  (256)
 17 2dhz_A RAP guanine nucleotide   96.7  0.0096 3.3E-07   42.8   8.2   72   21-115     4-78  (120)
 18 1wgy_A RAP guanine nucleotide   96.3   0.019 6.6E-07   40.3   7.5   50   25-81      8-57  (104)
 19 3cf6_E RAP guanine nucleotide   95.9   0.024 8.1E-07   50.4   8.2   48   26-81    352-399 (694)
 20 4eku_A Protein-tyrosine kinase  95.9   0.042 1.4E-06   45.9   9.2   88   27-132    22-115 (392)
 21 2al3_A TUG long isoform; TUG U  95.1   0.025 8.5E-07   38.8   4.2   38   37-77     16-53  (90)
 22 3au4_A Myosin-X; protein-prote  94.1    0.17 5.9E-06   43.3   8.1   68   28-120   218-285 (555)
 23 2al6_A Focal adhesion kinase 1  94.1     0.2   7E-06   40.9   8.1   85   28-132     9-95  (375)
 24 4dxa_B KREV interaction trappe  92.0    0.25 8.6E-06   39.4   5.6   61   37-121    12-74  (322)
 25 2j0j_A Focal adhesion kinase 1  87.4     2.9 9.9E-05   36.2   9.0   52   28-81      9-60  (656)
 26 3qij_A Protein 4.1; cytoskelet  80.2     7.2 0.00025   30.6   7.8   48   27-80     18-65  (296)
 27 3pvl_A Myosin VIIA isoform 1;   80.0     9.8 0.00033   33.6   9.2   49   27-81    264-312 (655)
 28 3ivf_A Talin-1; FERM domain, c  76.4     5.7  0.0002   31.9   6.2   42   37-80     92-133 (371)
 29 1ef1_A Moesin; membrane, FERM   76.1     9.3 0.00032   29.4   7.2   37   41-80     12-48  (294)
 30 2kc2_A Talin-1, F1; FERM, adhe  72.6     8.3 0.00028   27.5   5.6   43   37-81     18-60  (128)
 31 1h4r_A Merlin; FERM, neurofibr  71.0      16 0.00056   28.4   7.5   46   27-79     23-68  (314)
 32 1rrb_A RAF-1 RBD, RAF proto-on  60.1      18 0.00061   25.2   5.1   49   24-76     16-64  (107)
 33 1e7u_A Phosphatidylinositol 3-  60.0      15  0.0005   34.2   5.9   44   29-77     81-132 (961)
 34 1wxm_A A-RAF proto-oncogene se  58.2      33  0.0011   22.9   6.0   49   24-76      5-53  (86)
 35 2ylm_A Ubiquitin carboxyl-term  58.0      19 0.00066   30.8   6.0   52   28-81    339-392 (530)
 36 1k8r_B Protein kinase BYR2; si  57.3      21 0.00071   24.7   4.9   33   45-79     13-45  (110)
 37 1c1y_B Proto-onkogene serine/t  53.0      26 0.00091   22.9   4.7   39   38-76      9-47  (77)
 38 2bps_A YUKD protein; ubiquitin  38.4      35  0.0012   22.2   3.6   35   43-77     19-53  (81)
 39 2i1j_A Moesin; FERM, coiled-co  37.8      88   0.003   27.0   7.0   45   28-79      6-50  (575)
 40 2wxf_A Phosphatidylinositol-4,  34.9      34  0.0012   31.7   4.1   36   41-76     97-137 (940)
 41 2kmc_A Fermitin family homolog  34.0 1.1E+02  0.0039   20.9   6.2   53   24-77     15-68  (102)
 42 2wp7_A PPPDE peptidase domain-  27.7      35  0.0012   25.2   2.4   50   27-76     54-103 (168)
 43 3ivf_A Talin-1; FERM domain, c  27.5      56  0.0019   26.0   3.8   48   28-80      5-53  (371)
 44 4a3p_A Ubiquitin carboxyl-term  27.2 1.9E+02  0.0065   21.4   8.4   39   41-81    140-178 (217)
 45 2l05_A Serine/threonine-protei  25.7      86  0.0029   21.2   3.9   48   26-77     17-64  (95)
 46 2lgx_A Fermitin family homolog  21.7 1.5E+02  0.0052   20.6   4.6   49   25-77     23-71  (112)
 47 3dbh_I NEDD8; cell cycle, acti  21.0 1.5E+02   0.005   17.9   5.7   44   24-69      8-51  (88)
 48 3ny5_A Serine/threonine-protei  20.7      74  0.0025   21.6   2.8   49   25-77     12-60  (96)
 49 3dnj_A ATP-dependent CLP prote  20.6   1E+02  0.0034   20.2   3.4   31   37-67      2-33  (85)

No 1  
>1wxa_A Afadin, AF-6 protein; RAS-binding domain, ubiquitin-like fold, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.15.1.5
Probab=100.00  E-value=2.3e-35  Score=213.24  Aligned_cols=105  Identities=41%  Similarity=0.760  Sum_probs=94.7

Q ss_pred             cCCCCCCCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcc
Q psy5450          19 KDGGPDTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQF   98 (133)
Q Consensus        19 ~d~~p~~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~   98 (133)
                      +||+|+.+|+|||||++|+++++||||+||.+|||++||++||+||||+++++++|+||||++. +++.+ +.       
T Consensus         2 ~~~~p~~~g~lkIYg~~L~~~~~Yksvlvt~~tta~~vV~eaLekygL~~~~~~~Y~LveV~~~-~~~~~-~~-------   72 (116)
T 1wxa_A            2 SSGSSGSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVAESLEKYGLEKENPKDYCIARVMLP-PGAQH-SD-------   72 (116)
T ss_dssp             CCCCCSCCCEEEECCTTTCSSSCCEEEECCSSCCHHHHHHHHHHHHTCSSSCTTTEEEEEEECC-SSCCS-SS-------
T ss_pred             CCCCCCCCeEEEEeCCcccCCCceEEEEeCCCCCHHHHHHHHHHHhCCCCCCchheEEEEEECc-ccccc-cc-------
Confidence            6899999999999999999999999999999999999999999999999999999999999864 22211 10       


Q ss_pred             cccceEEecCCCCchhHHHhhCCCCCcceeEEEe
Q psy5450          99 MNNQREYILDEDECPLAILMNHPQSRESRTIQFK  132 (133)
Q Consensus        99 ~~~~~ervL~d~E~PL~~~~~wp~~~~~~~~~~~  132 (133)
                      .+++.||+|+|+||||+++++||+..|+.+|+||
T Consensus        73 ~~g~~ErvL~~~E~Pl~i~~~w~~~~g~~~F~Lr  106 (116)
T 1wxa_A           73 ERGAKEIILDDDECPLQIFREWPSDKGILVFQLK  106 (116)
T ss_dssp             STTCEEECCCSSCCHHHHHHTCCGGGCCEEEEEE
T ss_pred             CCCceEEECCCCCCHHHHHHhccccCCceEEEEE
Confidence            1478899999999999999999999999999996


No 2  
>3ec8_A Putative uncharacterized protein FLJ10324; beta barrel, helix, structural genomics, structural genomics consortium, SGC, cell adhesion; 2.60A {Homo sapiens}
Probab=99.96  E-value=4.1e-30  Score=195.26  Aligned_cols=98  Identities=28%  Similarity=0.427  Sum_probs=83.3

Q ss_pred             CCCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccce
Q psy5450          24 DTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQR  103 (133)
Q Consensus        24 ~~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~~  103 (133)
                      ..||+|||||+.|++|+||||||+|.++||++||+||||||||+++++++|+||+|++. |+        +++..|+.++
T Consensus        33 ~~PG~LKIfG~~L~~G~~YKSvLas~rstA~elVkEALERYgL~ke~~~~y~Lcdvig~-pG--------~~~~~w~~e~  103 (166)
T 3ec8_A           33 SAPGVLKVFGDSVCTGTHYKSVLATGTSSARELVKEALERYALDPRQAGQYVLCDVVGQ-AG--------DAGQRWQARC  103 (166)
T ss_dssp             HCEEEEEEECCC--CCSCCEEEEEETTCCHHHHHHHHHHHTTSCGGGGGGEEEEEEEC-----------------CCCCE
T ss_pred             CCCcceEecccccCCCCCceeeeccccccHHHHHHHHHHHhccCcCCcceeEEEEeecC-CC--------CCcccccccc
Confidence            46799999999999999999999999999999999999999999999999999999987 42        3457899999


Q ss_pred             EEecCCCCchhHHHhhCCCCCcc-eeEE
Q psy5450         104 EYILDEDECPLAILMNHPQSRES-RTIQ  130 (133)
Q Consensus       104 ervL~d~E~PL~~~~~wp~~~~~-~~~~  130 (133)
                      +++|+|+||||+++.+|++..|- ..|.
T Consensus       104 ~rvLgd~EcPL~iq~lW~p~~g~~RrFE  131 (166)
T 3ec8_A          104 FRVFGDSEKPLLIQELWKPREGLSRRFE  131 (166)
T ss_dssp             EEECCTTCCHHHHHHHCCCCTTCCEEEE
T ss_pred             eeecCCCCCceeehcccCCCccchhhhh
Confidence            99999999999999999999964 3663


No 3  
>2c5l_C Phosphoinositide-specific phospholipase C PLC-epsilon; signaling protein/complex, RAS, ubiquitin superfold, oncogene, GTP-binding; HET: GTP; 1.9A {Homo sapiens} SCOP: d.15.1.5 PDB: 2byf_A
Probab=99.77  E-value=3.5e-18  Score=123.67  Aligned_cols=95  Identities=13%  Similarity=0.167  Sum_probs=76.4

Q ss_pred             CCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCC-----cCCCCceEEEEEecCCCCCCcccccCCCCccc
Q psy5450          25 TGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLT-----REDAHQYCLVQVNTAIPETPNTAQQNGGDQFM   99 (133)
Q Consensus        25 ~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~-----~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~   99 (133)
                      ....+-|||-  .|+.||++|+|+..|||.+||++||.|+|++     .+++++|+||||++... +       +....|
T Consensus         6 ~tf~v~V~~v--~p~~py~iv~vt~~STAqdvI~eaL~kag~~~~~~~~~~~~dYvLvEev~~~~-~-------~k~~~~   75 (117)
T 2c5l_C            6 ESFFVQVHDV--SPEQPRTVIKAPRVSTAQDVIQQTLCKAKYSLSILSNPNPSDYVLLEEVVKDT-T-------NKKTTT   75 (117)
T ss_dssp             CEEEEEEESC--CSSCCEEEEEEETTCBHHHHHHHHHHHTTTSHHHHHSCCGGGEEEEEEEECC----------------
T ss_pred             ceEEEEEecC--CCCCCeEEEEeCCCCcHHHHHHHHHHHcCCccccccCCCchHeEEEEEEcccC-C-------Cccccc
Confidence            3467888987  8999999999999999999999999999988     99999999999987311 0       122346


Q ss_pred             ccceEEecCCCCchhHHHhhCCCCCcceeEEEe
Q psy5450         100 NNQREYILDEDECPLAILMNHPQSRESRTIQFK  132 (133)
Q Consensus       100 ~~~~ervL~d~E~PL~~~~~wp~~~~~~~~~~~  132 (133)
                      +++++|+|+|+|+||++|..|.+.   --|-+|
T Consensus        76 ~~~~~RVL~~~E~~l~~qs~Wk~~---gRF~Lk  105 (117)
T 2c5l_C           76 PKSSQRVLLDQECVFQAQSKWKGA---GKFILK  105 (117)
T ss_dssp             -CEEEEECCTTSBHHHHHHTCSSC---EEEEEE
T ss_pred             cCceEEecCCCCCHHHHHHhhCcC---ceEEEE
Confidence            799999999999999999999964   555543


No 4  
>2bye_A Phospholipase C, epsilon 1; RAS association domain, ubiquitin superfold; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=99.50  E-value=1.4e-13  Score=98.50  Aligned_cols=90  Identities=11%  Similarity=0.139  Sum_probs=75.2

Q ss_pred             CceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccceEE
Q psy5450          26 GGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQREY  105 (133)
Q Consensus        26 ~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~~er  105 (133)
                      .-.|.|||.  .++.||-.+.++..|||.+||++||.+++....++.+|.|||+... .+     +  .....|+..+.|
T Consensus         9 tf~v~V~gv--~~~ePftI~~~~~~STAkdvl~qaL~ka~~~~~~~~~YvL~EE~v~-~~-----~--ek~~~~~~~~qR   78 (110)
T 2bye_A            9 THRVTVHGV--PGPEPFTVFTINGGTKAKQLLQQILTNEQDIKPVTTDYFLMEEKYF-IS-----K--EKNECRKQPFQR   78 (110)
T ss_dssp             CCEEEESSC--SSSSSSEEEECCTTCCHHHHHHHHHCCSSSSCCCCCSEEEEEECCC-CS-----S--SSCSCTTSCCEE
T ss_pred             EEEEEEcCC--CCCCCcEEEEecCCCcHHHHHHHHHHHhcCCCCCcccEEEEEEEec-cc-----c--ccCCccCCceee
Confidence            457888987  8999999999999999999999999999999999999999999332 11     0  001134577899


Q ss_pred             ecCCCCchhHHHhhCCCCCc
Q psy5450         106 ILDEDECPLAILMNHPQSRE  125 (133)
Q Consensus       106 vL~d~E~PL~~~~~wp~~~~  125 (133)
                      +|+|+|+||++|..|.+..|
T Consensus        79 vL~~~E~vl~aqs~Wk~~eg   98 (110)
T 2bye_A           79 AIGPEEEIMQILSSWFPEEG   98 (110)
T ss_dssp             EECSSSCHHHHHHHCCTTTT
T ss_pred             ecCCCccHHHHHhhhCCCCC
Confidence            99999999999999999843


No 5  
>1lfd_A Ralgds; RAL, effector interaction; HET: GNP; 2.10A {Rattus norvegicus} SCOP: d.15.1.5 PDB: 2b3a_A
Probab=99.09  E-value=1.6e-10  Score=79.34  Aligned_cols=46  Identities=24%  Similarity=0.463  Sum_probs=43.2

Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecC
Q psy5450          37 CRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTA   82 (133)
Q Consensus        37 ~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~   82 (133)
                      ..|+.||||++|.+|.+.+||+.||+|||++.+.+++|+|+|++.+
T Consensus        13 ~~gn~YKSI~ltsqDrtp~vI~~al~Khnl~~~~~~~y~L~Q~Lp~   58 (87)
T 1lfd_A           13 DNGNMYKSILVTSQDKAPTVIRKAMDKHNLDEDEPEDYELLQIISE   58 (87)
T ss_dssp             CSSEEEEEEEEETTCBHHHHHHHHHHHTTCCSSCGGGEEEEEESSS
T ss_pred             CCCcEEEEEEEecCCCcHHHHHHHHHHcCCCCCCccceEEEEEcCC
Confidence            4579999999999999999999999999999999999999999864


No 6  
>1rax_A Protein (RA-domain of RAL guanosine dissociation stimulator); RAS-binding domain, ralgef, ralgds, RAS; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=99.06  E-value=4.1e-10  Score=80.80  Aligned_cols=55  Identities=22%  Similarity=0.414  Sum_probs=48.4

Q ss_pred             ceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecC
Q psy5450          27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTA   82 (133)
Q Consensus        27 g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~   82 (133)
                      .+++|==+ -.-|+.||||++|.+|.+.+||+.||+||+++.+++++|+|+|++.+
T Consensus        29 ~IIRVs~d-~~~gn~YKSIlltsqDktp~VI~raL~Khnl~~~~~~~y~L~Q~Lp~   83 (115)
T 1rax_A           29 CIIRVSLD-VDNGNMYKSILVTSQDKAPAVIRKAMDKHNLEEEEPEDYELLQILSD   83 (115)
T ss_dssp             EEEEEEES-SSSCCCCEEEEEETTCCHHHHHHHHHHHHTCTTSCSTTEEEEEECSS
T ss_pred             EEEEEEEe-cCCCcEEEEEEEecCCCcHHHHHHHHHHcCCCCCCccceEEEEEcCC
Confidence            45666544 25689999999999999999999999999999999999999999864


No 7  
>1rlf_A RLF, RLF-RBD; signal transduction protein; NMR {Mus musculus} SCOP: d.15.1.5
Probab=99.04  E-value=3.2e-10  Score=78.31  Aligned_cols=56  Identities=23%  Similarity=0.292  Sum_probs=48.6

Q ss_pred             ceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecC
Q psy5450          27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTA   82 (133)
Q Consensus        27 g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~   82 (133)
                      .+++|==+.=..|+.||||++|++|.+.+||+.||+||+++.+++++|+|+|++.+
T Consensus         6 ~iIRVs~e~~~~Gn~YKSIlltsqDktp~vI~~al~Khnl~~~~~~~y~L~Q~Lp~   61 (90)
T 1rlf_A            6 RIIRVQMELGEDGSVYKSILVTSQDKAPSVISRVLKKNNRDSAVASEFELVQLLPG   61 (90)
T ss_dssp             EEEEEEECCSSSCCSCCEEEEETTCCCTTHHHHHHHHTTTTSCCCCCEEEEETTTT
T ss_pred             EEEEEEEEeCCCCceEEEEEEecCCCcHHHHHHHHHHcCCCCCChhheEEEEEcCC
Confidence            45666544225679999999999999999999999999999999999999999764


No 8  
>1ef5_A RGL; RAS-binding domain, RAS, RBD, RA, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: d.15.1.5
Probab=98.94  E-value=4.5e-10  Score=79.26  Aligned_cols=55  Identities=27%  Similarity=0.399  Sum_probs=48.6

Q ss_pred             ceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecC
Q psy5450          27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTA   82 (133)
Q Consensus        27 g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~   82 (133)
                      .+++|==+ -.-|+.||||++|.+|.+..||+.||+||+++.+.+++|+|+|++.+
T Consensus        19 ~iIRVs~e-~~~g~~YKSIlltsqDrtp~VI~raL~Khnl~~~~~~~y~L~Q~Lp~   73 (103)
T 1ef5_A           19 CIIRISVE-DNNGNMYKSIMLTSQDKTPAVIQRAMSKHNLESDPAEEYELVQVISE   73 (103)
T ss_dssp             CCEEEEES-SCSSCCCCCBCCSSCCCTHHHHHHHTTTTTCCCCSSSSEEEEEECSS
T ss_pred             EEEEEEEE-cCCCcEEEEEEEecCCCcHHHHHHHHHHcCCCCCChhheEEEEEcCC
Confidence            56666555 35678999999999999999999999999999999999999999874


No 9  
>3kh0_A Ralgds, ralgef, RAL guanine nucleotide dissociation stimulator; structural genomics consortium, SGC, RAS-association domain, alternative splicing; 2.10A {Homo sapiens} PDB: 2rgf_A 1lxd_A
Probab=98.93  E-value=1.6e-09  Score=79.87  Aligned_cols=55  Identities=22%  Similarity=0.397  Sum_probs=48.0

Q ss_pred             ceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecC
Q psy5450          27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTA   82 (133)
Q Consensus        27 g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~   82 (133)
                      .+++|==+. .-|+.||||++|.+|.+.+||+.||+|++++.+.+++|+|+|++.+
T Consensus        26 ~IIRVsvd~-~~gnlYKSIllTsqDrtp~VI~rAL~Khnl~~~~~~~y~LvQ~Lp~   80 (140)
T 3kh0_A           26 CIIRVSLDV-DNGNMYKSILVTSQDKAPAVIRKAMDKHNLEEEEPEDYELLQILSD   80 (140)
T ss_dssp             EEEEEEEEC-SSSEEEEEEEEETTCBHHHHHHHHHHHTTCTTSCGGGEEEEEEEET
T ss_pred             EEEEEEEEc-CCCcEEEEEEeecccccHHHHHHHHHHhCCCCCchhceEEEEEcCC
Confidence            456664432 4689999999999999999999999999999999999999999864


No 10 
>3ddc_B RAS association domain-containing family protein; oncogene, tumorsuppressor, ubiquitin fold, RAS effector, RAP rassf1, rassf5, RAPL, NORE1, GMPPNP; HET: GNP; 1.80A {Mus musculus}
Probab=98.77  E-value=3.1e-08  Score=75.02  Aligned_cols=75  Identities=13%  Similarity=0.262  Sum_probs=63.8

Q ss_pred             CCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEE-EecCCCCCCcccccCCCCcccccceEEecCCCCchhHHHh
Q psy5450          40 VPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQ-VNTAIPETPNTAQQNGGDQFMNNQREYILDEDECPLAILM  118 (133)
Q Consensus        40 ~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~Lve-V~~~~~~~~~~~~~~~~~~~~~~~~ervL~d~E~PL~~~~  118 (133)
                      ...+.|.|++.+|+.+||+..|+||-.+ .+|..|.|.+ |...                 .++.+|.|.|+||||.+..
T Consensus        86 gs~k~v~VsS~tTt~eVI~~LL~KFkV~-dnP~kFALye~vh~~-----------------gev~~RKL~d~E~PL~lrL  147 (163)
T 3ddc_B           86 DAIKQMHISSTTTVSEVIQGLLDKFMVV-DNPQKFALFKRIHKD-----------------GQVLFQKLSIADYPLYLRL  147 (163)
T ss_dssp             EEEEEEEEETTCCHHHHHHHHHHHTTCC-SCGGGEEEEEEEEET-----------------TEEEEEECCTTCCHHHHHH
T ss_pred             CceEEEEEccCCcHHHHHHHHHHHhccc-CChhheEEEEEEccC-----------------CcEEEEECCCcCcCHhHHh
Confidence            4578999999999999999999999876 4799999999 6543                 1567899999999999999


Q ss_pred             hCCCCCcceeEEEe
Q psy5450         119 NHPQSRESRTIQFK  132 (133)
Q Consensus       119 ~wp~~~~~~~~~~~  132 (133)
                      +|-++.....|-+|
T Consensus       148 ~~Gp~e~~~~fvLk  161 (163)
T 3ddc_B          148 LAGPDTDVLSFVLK  161 (163)
T ss_dssp             HHCSCTTTCEEEEE
T ss_pred             hcCCCCCeEEEEec
Confidence            99888877777665


No 11 
>2uwq_A Apoptosis-stimulating of P53 protein 2; ASPP2, ubiquitin-like, SH3-domain, cell cycle, ANK repeat, SH3-binding; NMR {Homo sapiens}
Probab=98.74  E-value=5.2e-08  Score=66.83  Aligned_cols=80  Identities=14%  Similarity=0.179  Sum_probs=65.0

Q ss_pred             CCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccceE
Q psy5450          25 TGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQRE  104 (133)
Q Consensus        25 ~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~~e  104 (133)
                      .+-.|+||=+  ......+.+.+|++||.++|| +.++-.|     ..+|+|+|.-                   ++ .|
T Consensus         5 ~~mel~Vwv~--g~er~v~~vgvT~~TTC~DVV-aL~~~~G-----~~~~~LvE~W-------------------R~-~E   56 (86)
T 2uwq_A            5 MPMFLTVYLS--NNEQHFTEVPVTPETICRDVV-DLCKEPG-----ESDCHLAEVW-------------------CG-SE   56 (86)
T ss_dssp             SSEEEEEECS--SCSSCEEEEEECTTCBSHHHH-HHSCSSC-----SSSCEEEEEE-------------------TT-EE
T ss_pred             cceEEEEEec--CCccEEEccCCCCCCcHHHHH-HHHHccC-----CCcEEEEeee-------------------CC-Cc
Confidence            3566888876  344567788999999999999 4443333     2899999983                   33 79


Q ss_pred             EecCCCCchhHHHhhCCCCCcceeEEEe
Q psy5450         105 YILDEDECPLAILMNHPQSRESRTIQFK  132 (133)
Q Consensus       105 rvL~d~E~PL~~~~~wp~~~~~~~~~~~  132 (133)
                      |+|.|+|+||.++..|-.....|.|.++
T Consensus        57 R~L~~~er~l~~l~~WG~~~~eV~F~Lr   84 (86)
T 2uwq_A           57 RPVADNERMFDVLQRFGSQRNEVRFFLR   84 (86)
T ss_dssp             EEECTTCBHHHHHHHHCSCGGGCEEEEE
T ss_pred             ccCCCcccHHHHHHHHcccCCceEEEEe
Confidence            9999999999999999999999999886


No 12 
>1wgr_A Growth factor receptor-bound protein 7; RA domain, GRB7, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=98.62  E-value=3.5e-07  Score=64.23  Aligned_cols=79  Identities=15%  Similarity=0.231  Sum_probs=68.2

Q ss_pred             CCCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccce
Q psy5450          24 DTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQR  103 (133)
Q Consensus        24 ~~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~~  103 (133)
                      ..+-++|||-    .+..+|+|.|+++.||.+|++...+|.++..  ...++|+|....                  -..
T Consensus         7 ~~k~vvkvf~----~Dgssksi~V~~~~Ta~dv~~~L~~K~~~~~--~~~WaLvE~~P~------------------L~~   62 (100)
T 1wgr_A            7 GRPHVVKVYS----EDGACRSVEVAAGATARHVCEMLVQRAHALS--DETWGLVECHPH------------------LAL   62 (100)
T ss_dssp             CSCEEEEEEE----TTSCEEEEEECTTCCHHHHHHHHHCSSSCCC--CCCCCEEEEETT------------------TTE
T ss_pred             CCCEEEEEEe----cCCCEEEEEECCCCcHHHHHHHHHHHcCCCC--CCCeEEEEecCC------------------CCc
Confidence            4457899996    4788999999999999999999999998775  568999999876                  346


Q ss_pred             EEecCCCCchhHHHhhCCCCCcc
Q psy5450         104 EYILDEDECPLAILMNHPQSRES  126 (133)
Q Consensus       104 ervL~d~E~PL~~~~~wp~~~~~  126 (133)
                      ||.+.|+|.++.++..||.....
T Consensus        63 ER~~EDHE~vvevl~~W~~~s~n   85 (100)
T 1wgr_A           63 ERGLEDHESVVEVQAAWPVGGDS   85 (100)
T ss_dssp             EEEECSSSCHHHHHTTSCSSSCC
T ss_pred             EEeccCchhHHHHHhhCccCCCc
Confidence            89999999999999999986533


No 13 
>2cs4_A Protein C12ORF2; GTP binding, ubiquitin fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=98.47  E-value=6.3e-07  Score=62.47  Aligned_cols=78  Identities=18%  Similarity=0.209  Sum_probs=62.9

Q ss_pred             ceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccceEEe
Q psy5450          27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQREYI  106 (133)
Q Consensus        27 g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~~erv  106 (133)
                      ..|+||=+....   +.+ -||.+||.+|||...++-.|.    +.+|+|+|.--                    ..||+
T Consensus         8 mel~Vwv~g~er---~Vs-GvT~~TTC~DVV~aL~~~~G~----~~~y~LvE~wR--------------------g~ER~   59 (95)
T 2cs4_A            8 MELKVWVDGVQR---IVC-GVTEVTTCQEVVIALAQAIGR----TGRYTLIEKWR--------------------DTERH   59 (95)
T ss_dssp             BCCCEEETTEEE---CCS-SBCSSSCHHHHHHHHHHHHSC----CSEEEEEEEET--------------------TEEEE
T ss_pred             CEEEEEECCcee---EEE-CCCCCCcHHHHHHHHHhccCC----CccEEEEEecC--------------------CCeec
Confidence            456676553222   122 799999999999988887773    57999999843                    37999


Q ss_pred             cCCCCchhHHHhhCCCCCcceeEEEe
Q psy5450         107 LDEDECPLAILMNHPQSRESRTIQFK  132 (133)
Q Consensus       107 L~d~E~PL~~~~~wp~~~~~~~~~~~  132 (133)
                      |+++++||.++..|-+....|.|.++
T Consensus        60 L~~~~r~l~~l~~wG~~~~eV~F~Lr   85 (95)
T 2cs4_A           60 LAPHENPIISLNKWGQYASDVQLILR   85 (95)
T ss_dssp             CCSSSCHHHHHHTTGGGSTTCEEEEE
T ss_pred             CCCcccHHHHHHHhCcCCCceEEEEE
Confidence            99999999999999999999999986


No 14 
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=98.38  E-value=4e-06  Score=65.41  Aligned_cols=92  Identities=17%  Similarity=0.290  Sum_probs=66.5

Q ss_pred             HHHHHHHhhhccccCCCCCCCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCC
Q psy5450           6 QQKLEQKLQQFRSKDGGPDTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPE   85 (133)
Q Consensus         6 ~q~~~~k~~~~r~~d~~p~~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~   85 (133)
                      ++|++.-|+.|+-.   .....+++||-    ++..+++|.|+++.||.+|+...++++++..  ..+++|+|+...   
T Consensus        17 ~~ki~~al~K~~ea---~~~k~~v~v~~----~d~~~k~i~v~~~~ta~ev~~~L~~k~~~~~--~~~~~l~E~~~~---   84 (291)
T 3tca_A           17 ADKIKLALEKLKEA---KVKKLVVKVHM----DDSSTKSLMVDERQLARDVLDNLFEKTHCDC--NVDWCLYEIYPE---   84 (291)
T ss_dssp             ------------------CCEEEEEEEC----TTSCEEEEEEETTCBHHHHHHHHHHHHCCCC--CTTEEEEEEETT---
T ss_pred             HHHHHHHHHHHHHh---hccceEEEEEc----CCCceEEEEeCCCCcHHHHHHHHHHHhCCCC--CCCeEEEEeccc---
Confidence            45565544544322   13457899995    4678999999999999999999999999865  347999999876   


Q ss_pred             CCcccccCCCCcccccceEEecCCCCchhHHHhhCCCCC
Q psy5450          86 TPNTAQQNGGDQFMNNQREYILDEDECPLAILMNHPQSR  124 (133)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~ervL~d~E~PL~~~~~wp~~~  124 (133)
                                     ..-++.|.|+|+++.++..|....
T Consensus        85 ---------------~~ler~l~d~E~v~~v~~~w~~~~  108 (291)
T 3tca_A           85 ---------------LQIERVFEDHENVVEVLSDWTRDT  108 (291)
T ss_dssp             ---------------TTEEEECCTTSBHHHHHTTSCTTC
T ss_pred             ---------------cccceecccchhHHHHHHhhcccc
Confidence                           456999999999999999999876


No 15 
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=98.01  E-value=4.2e-05  Score=61.96  Aligned_cols=95  Identities=17%  Similarity=0.265  Sum_probs=74.8

Q ss_pred             HHHHHHHHhhhccccCCCCCCCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCC
Q psy5450           5 RQQKLEQKLQQFRSKDGGPDTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIP   84 (133)
Q Consensus         5 r~q~~~~k~~~~r~~d~~p~~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~   84 (133)
                      .+.|+.--|+-|+.+.   -..=++|||-..    ...++|.|++.+||.+|+..+..+-++.  +...+.|+|+...  
T Consensus        13 k~~ki~~al~k~~~a~---~~k~ivkv~~~D----~ss~~l~V~~~~TA~dv~~~L~~k~~~~--~~~~W~L~E~~~~--   81 (281)
T 4gmv_A           13 KAEKIRVALEKIKEAQ---VKKLVIRVHMSD----DSSKTMMVDERQTVRQVLDNLMDKSHCG--YSLDWSLVETVSE--   81 (281)
T ss_dssp             CCTHHHHHHHHHHTTS---SCEEEEEEEETT----SCEEEEEEETTCBHHHHHHHHHHHSCCC--CCTTCEEEEEEGG--
T ss_pred             HHHHHHHHHHHHHhcC---cccEEEEEEecC----CCEEEEEECCCCcHHHHHHHHHHhcCCC--CCCCeEEEEEcCC--
Confidence            3445655566653222   223579999874    4799999999999999999888888765  4778999999876  


Q ss_pred             CCCcccccCCCCcccccceEEecCCCCchhHHHhhCCCCCcc
Q psy5450          85 ETPNTAQQNGGDQFMNNQREYILDEDECPLAILMNHPQSRES  126 (133)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~ervL~d~E~PL~~~~~wp~~~~~  126 (133)
                                      .+-||.|.|.|.++.++..|+.+...
T Consensus        82 ----------------l~lER~ledhE~V~dvl~~W~~ds~n  107 (281)
T 4gmv_A           82 ----------------LQMERIFEDHENLVENLLNWTRDSQN  107 (281)
T ss_dssp             ----------------GTEEEECCTTSBHHHHHTTSCTTCCC
T ss_pred             ----------------ccceeccccchhHHHHHHhcccCCCc
Confidence                            56799999999999999999998744


No 16 
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=97.91  E-value=5.3e-05  Score=60.54  Aligned_cols=80  Identities=14%  Similarity=0.142  Sum_probs=61.6

Q ss_pred             CCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccceE
Q psy5450          25 TGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQRE  104 (133)
Q Consensus        25 ~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~~e  104 (133)
                      ..-++|||-+.    ...++|.|+++.||.+|+..++++-+..  +...++|+|++..                  .+-|
T Consensus         7 ~~~ivkv~~~d----~ss~~l~V~~~mta~ev~~~l~~k~~~~--~~~~W~l~E~~~~------------------l~lE   62 (256)
T 3hk0_A            7 AKQDVKVFSED----GTSKVVEILADMTARDLCQLLVYKSHSV--DDNSWTLVEHHPH------------------LGLE   62 (256)
T ss_dssp             -CEEEEEEETT----SCEEEEEECTTCBHHHHHHHHHCCC---------EEEEEEETT------------------TTEE
T ss_pred             CceEEEEEecC----CcEEEEEECCCCCHHHHHHHHHHhcCCC--CCCCEEEEEECCC------------------cccc
Confidence            34689999753    5899999999999999999999987654  4679999999876                  5679


Q ss_pred             EecCCCCchhHHHhhCCCCCcceeE
Q psy5450         105 YILDEDECPLAILMNHPQSRESRTI  129 (133)
Q Consensus       105 rvL~d~E~PL~~~~~wp~~~~~~~~  129 (133)
                      |.|.|.|+.+.++..|++.. .+.|
T Consensus        63 R~ledhE~V~ev~~~~~s~~-~l~f   86 (256)
T 3hk0_A           63 RCLEDHELVVQVESTMASES-KFLF   86 (256)
T ss_dssp             EECCTTSBHHHHHHTCCSSC-EEEE
T ss_pred             cccccchhHHHHHhccCCCc-eEEE
Confidence            99999999999999998643 3444


No 17 
>2dhz_A RAP guanine nucleotide exchange factor (GEF)- like 1; LINK guanine nucleotide exchange factor II, LINK-gefii, RA domain, structural genomics; NMR {Homo sapiens}
Probab=96.68  E-value=0.0096  Score=42.81  Aligned_cols=72  Identities=17%  Similarity=0.244  Sum_probs=54.9

Q ss_pred             CCCCCCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcC---CCCceEEEEEecCCCCCCcccccCCCCc
Q psy5450          21 GGPDTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTRE---DAHQYCLVQVNTAIPETPNTAQQNGGDQ   97 (133)
Q Consensus        21 ~~p~~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e---~~~~y~LveV~~~~~~~~~~~~~~~~~~   97 (133)
                      |.+...-..+||    ++..-|.+|.+....||++|+..|-+|++...+   ..+++.||+|...               
T Consensus         4 ~~~~Dei~~~VY----~~Dhsy~tvr~~v~~sa~eIl~~va~kl~~~e~~~~~~~~l~Lv~V~ss---------------   64 (120)
T 2dhz_A            4 GSSGDEIFCRVY----MPDHSYVTIRSRLSASVQDILGSVTEKLQYSEEPAGREDSLILVAVSSS---------------   64 (120)
T ss_dssp             CSSCCCEEECEE----CTTSCCCCEEECTTCCHHHHHHHHHHHSTTCSSTTSCCSCCEEEEEETT---------------
T ss_pred             CCCCCcEEEEEE----eccCceEEEEEeccccHHHHHHHHHHHhccccccccccCceEEEEEccC---------------
Confidence            444555567777    568889999999999999999999999997653   3458999999653               


Q ss_pred             ccccceEEecCCCCchhH
Q psy5450          98 FMNNQREYILDEDECPLA  115 (133)
Q Consensus        98 ~~~~~~ervL~d~E~PL~  115 (133)
                          +...+|.|++.-+.
T Consensus        65 ----GEk~vlqp~d~sv~   78 (120)
T 2dhz_A           65 ----GEKVLLQPTEDCVF   78 (120)
T ss_dssp             ----CCCEECCTTCSCHH
T ss_pred             ----CcEeecCCcceEEE
Confidence                23567777776554


No 18 
>1wgy_A RAP guanine nucleotide exchange factor 5; ubiquitin fold, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=96.27  E-value=0.019  Score=40.26  Aligned_cols=50  Identities=18%  Similarity=0.242  Sum_probs=42.2

Q ss_pred             CCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEec
Q psy5450          25 TGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT   81 (133)
Q Consensus        25 ~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~   81 (133)
                      ..-..+||    ++..-|.++.+....||++|+..|-+|.+...+   ++.||+|..
T Consensus         8 D~i~~~Vy----~~Dhsy~tvr~~v~~sa~eIl~~va~kl~~~~e---~l~Lv~v~s   57 (104)
T 1wgy_A            8 EEIFCHVY----ITEHSYVSVKAKVSSIAQEILKVVAEKIQYAEE---DLALVAITF   57 (104)
T ss_dssp             SCCCEEEE----CSSSCEEEECCCTTCBSHHHHHHHHHHHTSCGG---GEEEEEECS
T ss_pred             CceEEEEE----eccCceEEEEEeccchHHHHHHHHHHHhcCCcc---ceEEEEEcc
Confidence            34567888    568889999999999999999999999987653   689999964


No 19 
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=95.93  E-value=0.024  Score=50.39  Aligned_cols=48  Identities=23%  Similarity=0.373  Sum_probs=41.5

Q ss_pred             CceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEec
Q psy5450          26 GGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT   81 (133)
Q Consensus        26 ~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~   81 (133)
                      ...+|||-.    +..|++|.+...+||++||..|++++|+.    ++|.||+|..
T Consensus       352 ~~~~~v~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~v~~  399 (694)
T 3cf6_E          352 EVLFKVYCI----DHTYTTIRVPVAASVKEVISAVADKLGSG----EGLIIVKMNS  399 (694)
T ss_dssp             EEEEEEECT----TSCEEEEEEETTCBHHHHHHHHHHHHTCC----SCEEEEEECT
T ss_pred             ceeEEEEcc----CCceeEEEeeccccHHHHHHHHHHHhCCc----ccceEEEEee
Confidence            357888855    67899999999999999999999999974    3699999964


No 20 
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=95.90  E-value=0.042  Score=45.90  Aligned_cols=88  Identities=13%  Similarity=0.085  Sum_probs=63.8

Q ss_pred             ceEEEeC--CccCCCCCeEEEEecCCCCHHHHHHHHH--HHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccc
Q psy5450          27 GTLKIYG--ESLCRDVPYKTLLLSVRDNATQVVKEML--AKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQ  102 (133)
Q Consensus        27 g~LKIYg--~~L~~g~~YksIlvt~~sta~~vV~eaL--ekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~  102 (133)
                      -+|||+-  ..-.++..|++|.+...+|+++||..+.  .++|++-..++.|.|..+.+.                  ..
T Consensus        22 ~~~~~~~~~~~~~~~~~~k~v~~d~~ttV~dVi~~i~~~~kiG~~i~~~~~FgL~~~~~~------------------~~   83 (392)
T 4eku_A           22 RILKVCFYSNSFNPGKNFKLVKCTVQTEIREIITSILLSGRIGPNIRLAECYGLRLKHMK------------------SD   83 (392)
T ss_dssp             EEEEEEECCSSSCGGGEEEEEEEETTCBHHHHHHHHHHTTTTCSSCCCGGGEEEEEEESS------------------SC
T ss_pred             eeEEEEecccccCCCCCeEEEEeCCCCcHHHHHHHHHHHhhcCCCcCccceEEEEEEECC------------------CC
Confidence            3678866  3345778899999999999999999999  588987667889999987553                  12


Q ss_pred             eEEecCCCCchhHHHhhCCCCC--cceeEEEe
Q psy5450         103 REYILDEDECPLAILMNHPQSR--ESRTIQFK  132 (133)
Q Consensus       103 ~ervL~d~E~PL~~~~~wp~~~--~~~~~~~~  132 (133)
                      ..+-|++++..-.+..-|-+..  +...|.|+
T Consensus        84 ~~~wL~~~~~l~~v~~k~~~~~~~~~~~~~fR  115 (392)
T 4eku_A           84 EIHWLHPQMTVGEVQDKYECLHVEAEWRYDLQ  115 (392)
T ss_dssp             CEEEECTTSBHHHHHHHSTTTSCGGGEEEEEE
T ss_pred             ceEECCCCCcHHHHHhhhhhccCCCceEEEEE
Confidence            3456787777777665555432  34455554


No 21 
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=95.10  E-value=0.025  Score=38.75  Aligned_cols=38  Identities=13%  Similarity=0.148  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEE
Q psy5450          37 CRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLV   77 (133)
Q Consensus        37 ~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~Lv   77 (133)
                      +++.--..|.|++.++..+|+.+|.+|||++   +++|+|-
T Consensus        16 ~~n~rr~~VKvtp~t~L~~VL~eaC~K~gl~---~~~~~Lk   53 (90)
T 2al3_A           16 APNGRRHTVKVTPSTVLLQVLEDTCRRQDFN---PSEYDLK   53 (90)
T ss_dssp             CTTSCEEEECCCTTSBHHHHHHHHHHHTTCC---GGGCEEE
T ss_pred             cCCCcEEEEEECCCCCHHHHHHHHHHHhCCC---hhhCeEE
Confidence            4556678999999999999999999999996   5688874


No 22 
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=94.12  E-value=0.17  Score=43.26  Aligned_cols=68  Identities=13%  Similarity=0.294  Sum_probs=53.8

Q ss_pred             eEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccceEEec
Q psy5450          28 TLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQREYIL  107 (133)
Q Consensus        28 ~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~~ervL  107 (133)
                      .++||    .++...+++.+.+.+|+.+|+..+.+++||.. ..+.|.|..+..                    ..++.|
T Consensus       218 ~~~V~----l~dg~~~~~~v~~~tt~~el~~~v~~~lgL~e-~~~~FgL~~~~~--------------------~~~~~L  272 (555)
T 3au4_A          218 TSTVY----CHGGGSCKITINSHTTAGEVVEKLIRGLAMED-SRNMFALFEYNG--------------------HVDKAI  272 (555)
T ss_dssp             EEEEE----ETTSCEEEEEECTTCBHHHHHHHHHHHTTCTT-CCSEEEEEEESS--------------------SCEEEC
T ss_pred             ceEEE----ecCCCeEEEEeCCCCcHHHHHHHHHHHcCCCC-CCCceEEEEEeC--------------------CeeEec
Confidence            45555    24567899999999999999999999999975 367899987632                    235789


Q ss_pred             CCCCchhHHHhhC
Q psy5450         108 DEDECPLAILMNH  120 (133)
Q Consensus       108 ~d~E~PL~~~~~w  120 (133)
                      .+++.++.+...|
T Consensus       273 ~~~~~i~D~~~~w  285 (555)
T 3au4_A          273 ESRTVVADVLAKF  285 (555)
T ss_dssp             CTTSBHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            9999999877655


No 23 
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=94.05  E-value=0.2  Score=40.95  Aligned_cols=85  Identities=7%  Similarity=0.027  Sum_probs=57.0

Q ss_pred             eEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccceEEec
Q psy5450          28 TLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQREYIL  107 (133)
Q Consensus        28 ~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~~ervL  107 (133)
                      ++|||=-.=.+|..++++.+...+|+++|+..+..++||  ...+-|.|..+...                  .....-|
T Consensus         9 ~l~V~l~~g~~~~~~~~~~~~~~tt~~dl~~~v~~~lgL--~~~~~FgL~~~~~~------------------~~~~~wL   68 (375)
T 2al6_A            9 VFHYFENSSEPTTWASIIRHGDATDVRGIIQKIVDCHKV--KNVACYGLRLSHLQ------------------SEEVHWL   68 (375)
T ss_dssp             EECCCCCSSCGGGCEEEEEECTTCBHHHHHHHHHHHTTC--SCGGGEEEEEEETT------------------SSCEEEE
T ss_pred             eEEEEecCCCCCCceEEEEeCCCCCHHHHHHHHHHHcCC--CeEeEEEEEEEEcC------------------CCceEee
Confidence            456663211256679999999999999999999999999  45779999987653                  1224567


Q ss_pred             CCCCchhHHHhhCCC--CCcceeEEEe
Q psy5450         108 DEDECPLAILMNHPQ--SRESRTIQFK  132 (133)
Q Consensus       108 ~d~E~PL~~~~~wp~--~~~~~~~~~~  132 (133)
                      ++++..-..+.-|-+  ......|+|+
T Consensus        69 ~~~~~l~~~~~k~~~~~~~~~~~l~fR   95 (375)
T 2al6_A           69 HLDMGVSNVREKFELAHPPEEWKYELR   95 (375)
T ss_dssp             CTTSBHHHHHHHHHTTSCGGGEEEEEE
T ss_pred             CCccchhhhhhhhhcccCCCceEEEEE
Confidence            777765555444411  1134555554


No 24 
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=92.04  E-value=0.25  Score=39.39  Aligned_cols=61  Identities=16%  Similarity=0.246  Sum_probs=49.7

Q ss_pred             CCCCCeEEEEecC--CCCHHHHHHHHHHHhCCCcCCCCceEEEEEecCCCCCCcccccCCCCcccccceEEecCCCCchh
Q psy5450          37 CRDVPYKTLLLSV--RDNATQVVKEMLAKYGLTREDAHQYCLVQVNTAIPETPNTAQQNGGDQFMNNQREYILDEDECPL  114 (133)
Q Consensus        37 ~~g~~YksIlvt~--~sta~~vV~eaLekyGL~~e~~~~y~LveV~~~~~~~~~~~~~~~~~~~~~~~~ervL~d~E~PL  114 (133)
                      ..+..|+.|-+..  .+||.++    ++.+||..+..+-|.|.++...                    .+.-|.++++|+
T Consensus        12 l~dg~~~~~~i~~~~~tt~~el----~e~lgL~~~~~~~FaL~~~~~~--------------------~e~~L~~~~~~~   67 (322)
T 4dxa_B           12 RMDGSYRSVELKHGNNTTVQQI----MEGMRLSQETQQYFTIWICSEN--------------------LSLQLKPYHKPL   67 (322)
T ss_dssp             CTTSCEEEEECTTGGGCCHHHH----HTTSSCCTTGGGGEEEEEECSS--------------------CEEECCTTCCHH
T ss_pred             EECCcEEEEEEcCCCCCcHHHH----HHHhCcCccccCeeEEEEECCc--------------------cccccCccccHH
Confidence            4567899999999  9999998    5668998777788999998432                    256799999999


Q ss_pred             HHHhhCC
Q psy5450         115 AILMNHP  121 (133)
Q Consensus       115 ~~~~~wp  121 (133)
                      .....|.
T Consensus        68 d~~~~W~   74 (322)
T 4dxa_B           68 QHVRDWP   74 (322)
T ss_dssp             HHHHTHH
T ss_pred             HHHHHHH
Confidence            8888873


No 25 
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=87.43  E-value=2.9  Score=36.25  Aligned_cols=52  Identities=6%  Similarity=0.043  Sum_probs=41.9

Q ss_pred             eEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEec
Q psy5450          28 TLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT   81 (133)
Q Consensus        28 ~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~   81 (133)
                      +++||-..=.++..++.|.....+|+++|+..+.+++|+  ...+-|.|.-.-.
T Consensus         9 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~i~~~v~~~l~i--~~~~~fgL~~~~~   60 (656)
T 2j0j_A            9 VFHYFENSSEPTTWASIIRHGDATDVRGIIQKIVDCHKV--KNVACYGLRLSHL   60 (656)
T ss_dssp             EECCCCCSSCGGGCEEEEEECTTCBHHHHHHHHHHHTTC--SCGGGEEEEEEES
T ss_pred             heEEeccCCCCCCceeEEEeCCCCcHHHHHHHHHHhcCc--ceeeeEEEEEeec
Confidence            455555544566789999999999999999999999999  3356899997754


No 26 
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=80.23  E-value=7.2  Score=30.56  Aligned_cols=48  Identities=13%  Similarity=0.156  Sum_probs=39.9

Q ss_pred             ceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEe
Q psy5450          27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVN   80 (133)
Q Consensus        27 g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~   80 (133)
                      =.++||    .++..++++.+.+.+|+++|+..+-+++||..  .+-|.|..+.
T Consensus        18 ~~~~V~----lldgt~~~~~vd~~tt~~el~~~v~~~l~L~e--~~~FgL~~~~   65 (296)
T 3qij_A           18 GHCKVS----LLDDTVYECVVEKHAKGQDLLKRVCEHLNLLE--EDYFGLAIWD   65 (296)
T ss_dssp             CEEEEE----CTTSCEEEEECCTTCBHHHHHHHHHHHHTCSS--GGGEEEEEEE
T ss_pred             EEEEEE----ccCCCEEEEEECCCCCHHHHHHHHHHHcCCCC--cceeEEEEEc
Confidence            355665    34567899999999999999999999999985  6789998763


No 27 
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=79.99  E-value=9.8  Score=33.58  Aligned_cols=49  Identities=20%  Similarity=0.154  Sum_probs=41.3

Q ss_pred             ceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEec
Q psy5450          27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT   81 (133)
Q Consensus        27 g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~   81 (133)
                      -.++||    .++..++++.+.+.+|+.+|+..+..++||..  .+-|.|..+..
T Consensus       264 i~~~V~----llDgt~~~~~vds~Tt~~ell~~V~~~LgL~e--~~~FgL~~~~~  312 (655)
T 3pvl_A          264 IMLPVT----FMDGTTKTLLTDSATTARELCNALADKISLKD--RFGFSLYIALF  312 (655)
T ss_dssp             EEEEEE----ETTSCEEEEEECTTCBHHHHHHHHHHHTTCSS--CTTEEEEEEET
T ss_pred             eEEEEE----ecCCceEEEEEccCCcHHHHHHHHHHHcCCcc--cccceeEEecC
Confidence            456665    45678999999999999999999999999976  57999998743


No 28 
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=76.39  E-value=5.7  Score=31.91  Aligned_cols=42  Identities=24%  Similarity=0.358  Sum_probs=37.5

Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEe
Q psy5450          37 CRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVN   80 (133)
Q Consensus        37 ~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~   80 (133)
                      .++..++++.+.+.+|+.+++..+-+++||..  .+.|.|..+.
T Consensus        92 l~dg~~~~~~vd~~tt~~el~~~v~~~l~L~e--~~~FgL~~~~  133 (371)
T 3ivf_A           92 MLDGTVKTIMVDDSKTVTDMLMTICARIGITN--HDEYSLVREL  133 (371)
T ss_dssp             CTTSCEEEEEEETTSBHHHHHHHHHHHTTCSC--GGGEEEECCC
T ss_pred             CcCCCEEEEEECCCCCHHHHHHHHHHHcCCCC--ccccEEEEEe
Confidence            46778999999999999999999999999985  6799998764


No 29 
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=76.13  E-value=9.3  Score=29.38  Aligned_cols=37  Identities=11%  Similarity=0.219  Sum_probs=32.2

Q ss_pred             CeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEe
Q psy5450          41 PYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVN   80 (133)
Q Consensus        41 ~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~   80 (133)
                      .+ .+.+.+.+|+++|+..+.+++||..  .+-|.|..+.
T Consensus        12 ~~-~~~v~~~tt~~el~~~v~~~l~L~e--~~~FgL~~~~   48 (294)
T 1ef1_A           12 EL-EFAIQPNTTGKQLFDQVVKTIGLRE--VWFFGLQYQD   48 (294)
T ss_dssp             EE-EEEECTTCBHHHHHHHHHHHHTCCC--GGGEEEEEEB
T ss_pred             eE-EEEECCCCcHHHHHHHHHHHcCCCC--cceeEEEEEC
Confidence            44 4999999999999999999999975  4689998874


No 30 
>2kc2_A Talin-1, F1; FERM, adhesion, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane, phosphoprotein, structural protein; NMR {Mus musculus}
Probab=72.59  E-value=8.3  Score=27.49  Aligned_cols=43  Identities=23%  Similarity=0.345  Sum_probs=36.9

Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEec
Q psy5450          37 CRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT   81 (133)
Q Consensus        37 ~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~   81 (133)
                      .++..+++++|+-+.++.+++...-.++|+..  .+.|.|+.-..
T Consensus        18 llDg~~ktl~VD~S~~V~~lv~~Ic~kigI~n--~~ey~L~~~~~   60 (128)
T 2kc2_A           18 MLDGTVKTIMVDDSKTVTDMLMTICARIGITN--HDEYSLVRELM   60 (128)
T ss_dssp             CTTSCEEEEEEEECSSHHHHHHHHHHHHTCCC--CSSEEEEEECC
T ss_pred             cCCCCEEEEEeCCCcCHHHHHHHHHHHhCCCC--ccccccccccc
Confidence            36779999999999999999999999999985  56799986433


No 31 
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=70.96  E-value=16  Score=28.36  Aligned_cols=46  Identities=11%  Similarity=0.069  Sum_probs=37.4

Q ss_pred             ceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEE
Q psy5450          27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQV   79 (133)
Q Consensus        27 g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV   79 (133)
                      -.++||=-   -| . ..+.+++.+|+.+|+..+..++||..  .+-|.|..+
T Consensus        23 ~~~~V~ll---dg-~-~~~~v~~~t~~~el~~~v~~~l~L~e--~~~FgL~~~   68 (314)
T 1h4r_A           23 FTVRIVTM---DA-E-MEFNCEMKWKGKDLFDLVCRTLGLRE--TWFFGLQYT   68 (314)
T ss_dssp             EEEEEECS---SC-E-EEEEEETTCBHHHHHHHHHHHHTCCC--GGGEEEEEE
T ss_pred             eEEEEEeC---Cc-e-EEEEeCCCCcHHHHHHHHHHHhCCCC--CccceEEEE
Confidence            45677743   23 3 44999999999999999999999986  678999887


No 32 
>1rrb_A RAF-1 RBD, RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain, transferase, riken structural genomics/proteomics initiative; NMR {Rattus norvegicus} SCOP: d.15.1.5
Probab=60.11  E-value=18  Score=25.20  Aligned_cols=49  Identities=14%  Similarity=0.185  Sum_probs=37.6

Q ss_pred             CCCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEE
Q psy5450          24 DTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCL   76 (133)
Q Consensus        24 ~~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~L   76 (133)
                      ...++|++|    -|...+-+|-|-+--|+.+.+..||++=||..+.+.-|.+
T Consensus        16 k~~~~ir~h----LPNqQrT~V~VrpG~tlrdaL~KaLk~R~L~pe~C~Vy~~   64 (107)
T 1rrb_A           16 KTSNTIRVF----LPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRL   64 (107)
T ss_dssp             ---CEEEEE----CTTTCCEEEECCTTCBHHHHHHHHHHHHTCCTTTEEEEEC
T ss_pred             cccceEEEE----CCCCCeEEEEecCCcCHHHHHHHHHHHcCCCHHHceeEEc
Confidence            345678887    3556788999999999999999999999998766544433


No 33 
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=59.97  E-value=15  Score=34.18  Aligned_cols=44  Identities=14%  Similarity=0.315  Sum_probs=31.5

Q ss_pred             EEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHh-------CCCcC-CCCceEEE
Q psy5450          29 LKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKY-------GLTRE-DAHQYCLV   77 (133)
Q Consensus        29 LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLeky-------GL~~e-~~~~y~Lv   77 (133)
                      +.||.+     ..=+|+.|+.++|+.++|..+++|.       ++..+ ++.+|.|-
T Consensus        81 v~i~~~-----~~~~t~~v~~~~t~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~vLk  132 (961)
T 1e7u_A           81 IVIHRS-----TTSQTIKVSADDTPGTILQSFFTKMAKKKSLMDIPESQNERDFVLR  132 (961)
T ss_dssp             EEEESS-----SCEEEEEEETTCCHHHHHHHHHHHSCC-----------CCSCCEEE
T ss_pred             EEEecC-----CceEEEEECCCCCHHHHHHHHHHHhhhccccccCCCCCCccceEEE
Confidence            566622     3449999999999999999999987       45443 67888873


No 34 
>1wxm_A A-RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain (RBD), ubiquitin-like fold, A-RAF kinase, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=58.24  E-value=33  Score=22.95  Aligned_cols=49  Identities=20%  Similarity=0.312  Sum_probs=40.5

Q ss_pred             CCCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEE
Q psy5450          24 DTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCL   76 (133)
Q Consensus        24 ~~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~L   76 (133)
                      ...++|++|    -|....-+|-|-+--|+.+.+..||++=||..+.+.-|.+
T Consensus         5 k~~~~irvh----LPn~QrT~V~VrpG~tlrdaL~KaLk~R~L~pe~C~Vy~~   53 (86)
T 1wxm_A            5 SSGGTVKVY----LPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRL   53 (86)
T ss_dssp             CCSSEEEEE----CSSSCEEEEECCSSCBSHHHHHHHHHTTTCCSSSEEEEEE
T ss_pred             cccceEEEE----CCCCCeEEEEecCCcCHHHHHHHHHHHcCCCHHHeEEEEc
Confidence            556788887    4556788999999999999999999999999876666544


No 35 
>2ylm_A Ubiquitin carboxyl-terminal hydrolase 7; UBL; 2.70A {Homo sapiens}
Probab=57.95  E-value=19  Score=30.84  Aligned_cols=52  Identities=13%  Similarity=0.114  Sum_probs=42.2

Q ss_pred             eEEEeCCccCCCCC--eEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEec
Q psy5450          28 TLKIYGESLCRDVP--YKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT   81 (133)
Q Consensus        28 ~LKIYg~~L~~g~~--YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~   81 (133)
                      .+||+  |+.++..  =-++++.+++|+.+|+.++..+.++..+......|.+|..
T Consensus       339 ~~kv~--w~~~~~~~~~~~l~vpK~gtV~Dll~~l~k~~~~~~~~~~~lRl~ev~~  392 (530)
T 2ylm_A          339 SFKCI--WLNSQFREEEITLYPDKHGCVRDLLEECKKAVELGEKASGKLRLLEIVS  392 (530)
T ss_dssp             CEEEE--EECTTSCEEEEEECCBTTCBHHHHHHHHHTTCCCCTTCCCCEEEEEEET
T ss_pred             eEEEE--EECCCCceEEEEEEcCCCCCHHHHHHHHHHhcCCCcCCcccEEEEEEEC
Confidence            47776  5555543  3578889999999999999999999888889999999843


No 36 
>1k8r_B Protein kinase BYR2; signal transduction, cancer, GTPase, ubiquitin fold, signaling protein; HET: GNP; 3.00A {Schizosaccharomyces pombe} SCOP: d.15.1.5 PDB: 1i35_A
Probab=57.27  E-value=21  Score=24.69  Aligned_cols=33  Identities=21%  Similarity=0.340  Sum_probs=24.4

Q ss_pred             EEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEE
Q psy5450          45 LLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQV   79 (133)
Q Consensus        45 Ilvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV   79 (133)
                      --|...-.-...+..||.||||  +||+.|..|--
T Consensus        13 RaVq~~~~y~~~L~~ALkKF~l--edpskw~Vcvt   45 (110)
T 1k8r_B           13 RAVQSRGDYQKTLAIALKKFSL--EDASKFIVCVS   45 (110)
T ss_dssp             EEEECCSCHHHHHHHHHHHHTC--CCTTSEEEEEE
T ss_pred             EEeeehhhHHHHHHHHHHHcCC--CChhHeEEEEe
Confidence            3344444555889999999999  67999987644


No 37 
>1c1y_B Proto-onkogene serine/threonine protein kinase RAF-1; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: d.15.1.5 PDB: 1gua_B* 1rfa_A 3kud_B* 3kuc_B*
Probab=52.97  E-value=26  Score=22.91  Aligned_cols=39  Identities=13%  Similarity=0.074  Sum_probs=32.6

Q ss_pred             CCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEE
Q psy5450          38 RDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCL   76 (133)
Q Consensus        38 ~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~L   76 (133)
                      |....-+|-|-+--|+.+.+..||++=||..+.+.-|.+
T Consensus         9 Pn~QrT~V~VrpG~tlrdaL~KaLk~R~L~pe~C~V~~~   47 (77)
T 1c1y_B            9 PNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRL   47 (77)
T ss_dssp             TTTEEEEEECCTTCBHHHHHHHHHHTTTCCGGGEEEEEE
T ss_pred             CCCceEEEEecCCcCHHHHHHHHHHHcCCCHHHeEEEEe
Confidence            445677888999999999999999999998877666655


No 38 
>2bps_A YUKD protein; ubiquitin-like protein, ubiquitin; 2.7A {Bacillus subtilis}
Probab=38.38  E-value=35  Score=22.23  Aligned_cols=35  Identities=11%  Similarity=-0.007  Sum_probs=28.9

Q ss_pred             EEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEE
Q psy5450          43 KTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLV   77 (133)
Q Consensus        43 ksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~Lv   77 (133)
                      --+.++..=|+.+++..+.+-|+++....+.|.+-
T Consensus        19 ~DLRIP~~~tvK~Li~~l~ea~~l~~~~~~~~~ir   53 (81)
T 2bps_A           19 FDLRLSDYHPVKKVIDIAWQAQSVSMPPREGHWIR   53 (81)
T ss_dssp             EEEEEETTSBTTHHHHHHHHHSCCCSCCCTTCEEE
T ss_pred             EEEECCCchhHHHHHHHHHHHhCCCcCCCCCCEEE
Confidence            35788899999999999999999997666557554


No 39 
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=37.80  E-value=88  Score=26.99  Aligned_cols=45  Identities=9%  Similarity=0.198  Sum_probs=36.2

Q ss_pred             eEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEE
Q psy5450          28 TLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQV   79 (133)
Q Consensus        28 ~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV   79 (133)
                      .++||=-.   | .+ .+.+++.+|+.+|+..+..++||..  .+-|.|.-+
T Consensus         6 ~v~V~llD---g-t~-e~~vd~~tt~~ell~~V~~~LgL~e--~~~FGL~~~   50 (575)
T 2i1j_A            6 NVRVTTMD---A-EL-EFAIQQTTTGKQLFDQVVKTIGLRE--VWFFGLQYT   50 (575)
T ss_dssp             EEEEECSS---C-EE-EEEEETTCBHHHHHHHHHHHHTCCC--GGGEEEEEE
T ss_pred             EEEEEeCC---C-eE-EEEECCCCCHHHHHHHHHHHcCCCC--ccceeEEEE
Confidence            46676532   3 34 5999999999999999999999975  578999876


No 40 
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=34.94  E-value=34  Score=31.70  Aligned_cols=36  Identities=22%  Similarity=0.221  Sum_probs=27.9

Q ss_pred             CeEEEEecCCCCHHHHHHHHHHHh----CCC-cCCCCceEE
Q psy5450          41 PYKTLLLSVRDNATQVVKEMLAKY----GLT-REDAHQYCL   76 (133)
Q Consensus        41 ~YksIlvt~~sta~~vV~eaLeky----GL~-~e~~~~y~L   76 (133)
                      .=.|+.++.++|+.++|..+|.|.    ++. .+++++|.|
T Consensus        97 ~~~t~~v~~~~~p~~~i~~~~~k~~~~~~~~~~~~~~dyvL  137 (940)
T 2wxf_A           97 ESFTFQVSTKDMPLALMACALRKKATVFRQPLVEQPEEYAL  137 (940)
T ss_dssp             CEEEEEEETTCCHHHHHHHHHHHHHHHTTC----CGGGEEE
T ss_pred             ceEEEEeCCCCCHHHHHHHHHHHHHHhcCCCccCCccceEE
Confidence            349999999999999999999864    445 667888876


No 41 
>2kmc_A Fermitin family homolog 1; kindlin, cytoskeleton, integrin, N-terminal, talin, cell adhesion, cell junction, cell membrane, cell projection; NMR {Mus musculus}
Probab=33.97  E-value=1.1e+02  Score=20.91  Aligned_cols=53  Identities=15%  Similarity=0.120  Sum_probs=44.1

Q ss_pred             CCCceEEEeCCccCCC-CCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEE
Q psy5450          24 DTGGTLKIYGESLCRD-VPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLV   77 (133)
Q Consensus        24 ~~~g~LKIYg~~L~~g-~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~Lv   77 (133)
                      +....|+||=..+... ..-+++.|+.+...--|+-...|+++.. ++.++|.|=
T Consensus        15 d~SWeL~V~V~d~~~~~~~~~~lrV~GdlHIGGvmlklVEki~i~-~dWSDhaLW   68 (102)
T 2kmc_A           15 SASWELVVRVDHANGEQQTEITLRVSGDLHIGGVMLKLVEQMNIA-QDWSDYALW   68 (102)
T ss_dssp             CCCEEEEEEEECTTSSCEEEEEEEECSCCBHHHHHHHHHHHHCCS-SCCSSEEEE
T ss_pred             cCcEEEEEEEecCCcccCccEEEEEeeccccchhhhhhhhhcccc-cchHHhhhh
Confidence            3458899999987765 6779999999999999999999999854 467788774


No 42 
>2wp7_A PPPDE peptidase domain-containing protein 2; hydrolase, phosphoprotein, ubiquitin-like protein; 1.90A {Mus musculus} PDB: 3ebq_A
Probab=27.68  E-value=35  Score=25.20  Aligned_cols=50  Identities=14%  Similarity=0.114  Sum_probs=36.8

Q ss_pred             ceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEE
Q psy5450          27 GTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCL   76 (133)
Q Consensus        27 g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~L   76 (133)
                      |+...-++.-.-|.+.++|.+...+-..+.|.+.|+.++-+.-.++.|.|
T Consensus        54 GI~~~~Pg~~~~g~~resi~lG~T~~~~~~~~~~l~~l~~~~~~g~~Y~L  103 (168)
T 2wp7_A           54 GISSCTPGGTLLGPPDSVVDVGNTEVTEEIFLEYLSSLGESLFRGEAYNL  103 (168)
T ss_dssp             EEEEESTTCSTTCSCSEEEEEEEECCCHHHHHHHHHHHHTTTCSGGGCBT
T ss_pred             CeEecCCCcCCCCCeEEEEECCCccCCHHHHHHHHHHhhhccCCcccCch
Confidence            55555555434456799999999999999999999988755355666664


No 43 
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=27.46  E-value=56  Score=25.96  Aligned_cols=48  Identities=13%  Similarity=0.077  Sum_probs=39.0

Q ss_pred             eEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCC-cCCCCceEEEEEe
Q psy5450          28 TLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLT-REDAHQYCLVQVN   80 (133)
Q Consensus        28 ~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~-~e~~~~y~LveV~   80 (133)
                      .|||.=.     ..-|++..++++|..++.+.+-|++.-. ..++++|.|--.-
T Consensus         5 ~~~~~~~-----~~~~~~~f~~~~~v~~~~~~i~e~~~~~~~~~~~~y~l~~~~   53 (371)
T 3ivf_A            5 SLKISIG-----NVVKTMQFEPSTMVYDACRMIRERIPEALAGPPNDFGLFLSD   53 (371)
T ss_dssp             EEEEEET-----TEEEEEEECTTCBHHHHHHHHHTTCGGGGSSCGGGEEEEECC
T ss_pred             EEEEEec-----ceeEEEEECCCCCHHHHHHHHHHhcccccCCCHHHCeEeccC
Confidence            4666532     6779999999999999999999999653 5678999998743


No 44 
>4a3p_A Ubiquitin carboxyl-terminal hydrolase 15; 1.40A {Homo sapiens} PDB: 4a3o_A 3pv1_A 3ppa_A* 3t9l_A 3lmn_A
Probab=27.19  E-value=1.9e+02  Score=21.39  Aligned_cols=39  Identities=18%  Similarity=0.129  Sum_probs=31.9

Q ss_pred             CeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEEEEec
Q psy5450          41 PYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLVQVNT   81 (133)
Q Consensus        41 ~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~LveV~~   81 (133)
                      ...++.+|..+|..++.++|-+.++++.+  .+++|-.+..
T Consensus       140 ~~~~~~~Sk~~ti~~l~~~~~~~~~i~~~--~~~RlW~~~~  178 (217)
T 4a3p_A          140 NVVTRRFSKADTIDTIEKEIRKIFSIPDE--KETRLWNKYM  178 (217)
T ss_dssp             EEEEEEECTTSBHHHHHHHHHHHTTCCTT--SCEEEEEEEE
T ss_pred             cceEEEEcccchHHHHHHHHHHHhCCCCC--CceEEEEecC
Confidence            45678999999999999999999999764  3577777654


No 45 
>2l05_A Serine/threonine-protein kinase B-RAF; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=25.66  E-value=86  Score=21.25  Aligned_cols=48  Identities=13%  Similarity=0.143  Sum_probs=39.6

Q ss_pred             CceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEE
Q psy5450          26 GGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLV   77 (133)
Q Consensus        26 ~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~Lv   77 (133)
                      .++|++|    -|....-+|-|-+--|+.+.+..||++=||..+.+.-|.+.
T Consensus        17 ~~~irvh----LPNqQrT~V~VrpG~tlrdAL~KaLk~R~L~pe~C~Vy~~~   64 (95)
T 2l05_A           17 KPIVRVF----LPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVYRIQ   64 (95)
T ss_dssp             SCEEEEE----ETTTEEEEEECCTTCBHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred             ccEEEEE----CCCCCeEEEEecCCcCHHHHHHHHHHHcCCCHHHcEEEEcC
Confidence            4688887    35566888999999999999999999999988777666554


No 46 
>2lgx_A Fermitin family homolog 2; kindlin, membrane, integrin activation, cell adhesion; NMR {Homo sapiens}
Probab=21.68  E-value=1.5e+02  Score=20.58  Aligned_cols=49  Identities=14%  Similarity=0.061  Sum_probs=40.4

Q ss_pred             CCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEE
Q psy5450          25 TGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLV   77 (133)
Q Consensus        25 ~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~Lv   77 (133)
                      ....|+||=..+.   .-+++.|+.+...--|+-...|+++..+ +.+||.|=
T Consensus        23 ~SWeL~V~V~d~~---~~~~lrV~GdlHIGGvmLkLVE~i~i~~-dWSDhaLW   71 (112)
T 2lgx_A           23 GTWELSVHVTDVN---RDVTLRVTGEVHIGGVMLKLVEKLDVKK-DWSDHALW   71 (112)
T ss_dssp             SCCCEECCBTTTT---BCCEECCCTTSCHHHHHHHHHHHCCSCC-CSSSSBEE
T ss_pred             CcEEEEEEEecCC---ccEEEEEeeccccccchhhhhhhhcccc-cchHhhhh
Confidence            3578999988777   6789999999999999999999987554 66787663


No 47 
>3dbh_I NEDD8; cell cycle, activating enzyme, apoptosis, membrane, UBL conjugation pathway, ATP-binding, ligase, nucleotide- binding, polymorphism; 2.85A {Homo sapiens} SCOP: d.15.1.1 PDB: 3dbr_I 3dbl_I
Probab=21.02  E-value=1.5e+02  Score=17.89  Aligned_cols=44  Identities=16%  Similarity=0.292  Sum_probs=31.6

Q ss_pred             CCCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcC
Q psy5450          24 DTGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTRE   69 (133)
Q Consensus        24 ~~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e   69 (133)
                      ...+.++|+=-.+. |..| .|.++.++|+.++-...-++.|+..+
T Consensus         8 ~~~~~m~i~vk~~~-g~~~-~~~v~~~~tV~~lK~~i~~~~gip~~   51 (88)
T 3dbh_I            8 GSGGSMLIKVKTLT-GKEI-EIDIEPTDKVERIKERVEEKEGIPPQ   51 (88)
T ss_dssp             SCCCCEEEEEECTT-SCEE-EEEECTTCBHHHHHHHHHHHHCCCGG
T ss_pred             CCCCcEEEEEEcCC-CCEE-EEEECCCCCHHHHHHHHHHHHCcCHH
Confidence            44456777655442 3343 78999999999988888888887653


No 48 
>3ny5_A Serine/threonine-protein kinase B-RAF; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; HET: MSE; 1.99A {Homo sapiens} SCOP: d.15.1.0
Probab=20.74  E-value=74  Score=21.60  Aligned_cols=49  Identities=12%  Similarity=0.140  Sum_probs=39.3

Q ss_pred             CCceEEEeCCccCCCCCeEEEEecCCCCHHHHHHHHHHHhCCCcCCCCceEEE
Q psy5450          25 TGGTLKIYGESLCRDVPYKTLLLSVRDNATQVVKEMLAKYGLTREDAHQYCLV   77 (133)
Q Consensus        25 ~~g~LKIYg~~L~~g~~YksIlvt~~sta~~vV~eaLekyGL~~e~~~~y~Lv   77 (133)
                      ..|+|++|    -|....-+|-|-+--|+.+.+..||++=||..+.+.-|.+.
T Consensus        12 ~~~~irvh----LPNqQrT~V~VrpG~tlrdaL~KaLk~R~L~pe~C~Vy~~~   60 (96)
T 3ny5_A           12 QKPIVRVF----LPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVYRIQ   60 (96)
T ss_dssp             SSCEEEEE----ETTTEEEEEECCTTCBHHHHHHHHHHTTTCCGGGEEEEECC
T ss_pred             hhCEEEEE----CCCCceEEEEecCCcCHHHHHHHHHHHcCCChHHeEEEEcc
Confidence            45778887    34566788999999999999999999999988766555553


No 49 
>3dnj_A ATP-dependent CLP protease adapter protein CLPS; adaptor, protein-peptide complex, peptide binding protein; 1.15A {Caulobacter vibrioides} SCOP: d.45.1.2 PDB: 3g19_A 3gq0_A 3gq1_A 3gw1_A 3g1b_A 3g3p_A*
Probab=20.57  E-value=1e+02  Score=20.18  Aligned_cols=31  Identities=16%  Similarity=0.289  Sum_probs=21.8

Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHh-CCC
Q psy5450          37 CRDVPYKTLLLSVRDNATQVVKEMLAKY-GLT   67 (133)
Q Consensus        37 ~~g~~YksIlvt~~sta~~vV~eaLeky-GL~   67 (133)
                      .++.+|+.|+.+-+-|+-+-|.++|.++ |++
T Consensus         2 ~~p~~y~Vil~NDd~~tme~Vv~vL~~vf~~~   33 (85)
T 3dnj_A            2 QKPSLYRVLILNDDYTPMEFVVYVLERFFNKS   33 (85)
T ss_dssp             ----CEEEEEECCSSSBHHHHHHHHHHHHCCC
T ss_pred             CCCCceEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence            4567899999999988888888887764 444


Done!