RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5452
(89 letters)
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 130 bits (328), Expect = 5e-39
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
Q +++P+ +HCSAGCGRTG ICAIDY W LL+ G + ++FS+F+L+REMR QR ++VQT
Sbjct: 216 QEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQT 275
Query: 63 KEQYILVHQAVKELFLEQLRMIDSHPL 89
+EQY LV+ AV ELF Q+ +I
Sbjct: 276 QEQYELVYNAVLELFKRQMDVIRDKHS 302
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 128 bits (323), Expect = 3e-38
Identities = 41/80 (51%), Positives = 53/80 (66%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
Q S P+ VHCSAGCGRTG +C +DYV LL + DFSLF +V +MRKQR A VQT
Sbjct: 222 QGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQT 281
Query: 63 KEQYILVHQAVKELFLEQLR 82
+EQY ++ V ++F L+
Sbjct: 282 EEQYRFLYHTVAQMFCSTLQ 301
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 122 bits (308), Expect = 3e-36
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
P++VH SAG GRTGTI ID + + L+ D + ++ +R QR MVQT
Sbjct: 200 SLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQT 259
Query: 63 KEQYILVHQAVKELFLEQLRMID 85
+ QY ++ A+ + + ++
Sbjct: 260 EAQYKFIYVAIAQFIETTKKKLE 282
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 124 bits (313), Expect = 3e-35
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
P++VH SAG GRTGTI ID + + L+ D + ++ +R QR MVQT
Sbjct: 442 SLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQT 501
Query: 63 KEQYILVHQAVKELFLEQLRMIDSH 87
+ QY ++ A+ + + ++
Sbjct: 502 EAQYKFIYVAIAQFIETTKKKLEVL 526
Score = 47.6 bits (113), Expect = 5e-08
Identities = 13/80 (16%), Positives = 21/80 (26%), Gaps = 3/80 (3%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
+ V C G G + D L + K + R T+
Sbjct: 166 HIKVMCEGGRYTVGGLETFDS---LTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAAD 222
Query: 69 VHQAVKELFLEQLRMIDSHP 88
+ V EL +Q +
Sbjct: 223 IENRVLELNKKQESEDTAKA 242
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 120 bits (302), Expect = 3e-35
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ E PV+VHCSAG GR+GT C D L+ K + ++ EMRK R+ ++QT
Sbjct: 210 LSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQT 269
Query: 63 KEQYILVHQAVKELF 77
+Q + AV E
Sbjct: 270 ADQLRFSYLAVIEGA 284
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 120 bits (302), Expect = 5e-35
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ PV+VHCSAG GRTGT ID + ++R ++ D + ++ +R QR MVQT
Sbjct: 235 SIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQT 294
Query: 63 KEQYILVHQAVKELFLEQLRMI 84
+ QY ++ AV+ R I
Sbjct: 295 EAQYRFIYMAVQHYIETLQRRI 316
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 122 bits (307), Expect = 1e-34
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
P++VHCSAG GRTGTI ID + + L+ D + ++ +R QR MVQT
Sbjct: 442 SLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQT 501
Query: 63 KEQYILVHQAVKELFLEQLRMIDSH 87
+ QY ++ A+ + + ++
Sbjct: 502 EAQYKFIYVAIAQFIETTKKKLEVL 526
Score = 47.2 bits (112), Expect = 5e-08
Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
+ V C G G + D + L+ + K + R T+
Sbjct: 166 HIKVMCEGGRYTVGGLETFDSLTDLV---EHFKKTGIEEASGAFVYLRQPYYATRVNAAD 222
Query: 69 VHQAVKELFLEQLRMIDSHP 88
+ V EL +Q +
Sbjct: 223 IENRVLELNKKQESEDTAKA 242
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 118 bits (297), Expect = 2e-34
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+A + PV+VHCSAG GRTG + ++ L+ N+ +VR MR QR M+QT
Sbjct: 233 RAGKEEPVVVHCSAGIGRTGVLITMETAMCLIEC---NQPVYPLDIVRTMRDQRAMMIQT 289
Query: 63 KEQYILVHQAVKELFLEQL 81
QY V +A+ +++ E
Sbjct: 290 PSQYRFVCEAILKVYEEGF 308
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 121 bits (304), Expect = 3e-34
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ PV+VHCSAG GRTGT ID + ++R ++ D + ++ +R QR MVQT
Sbjct: 448 SIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQT 507
Query: 63 KEQYILVHQAVKELF 77
+ QY ++ AV+
Sbjct: 508 EAQYRSIYMAVQHYI 522
Score = 41.8 bits (98), Expect = 4e-06
Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 24/83 (28%)
Query: 9 PVLVHCSAGC---GRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQ 65
V++ C G ++ LV ++ MV+T
Sbjct: 169 HVMIRCQELKYDVGGGERFDSLT------------------DLVEHY--KKNPMVETLGT 208
Query: 66 YILVHQAVKELFLEQLRMIDSHP 88
+ + Q + + I+S
Sbjct: 209 VLQLKQPLNTTRI-NAAEIESRV 230
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 116 bits (293), Expect = 5e-34
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
PVLVHCSAG GRTG + ++ L N +VR+MR QR MVQT QY
Sbjct: 211 PVLVHCSAGIGRTGVLVTMETAMCLTER---NLPIYPLDIVRKMRDQRAMMVQTSSQYKF 267
Query: 69 VHQAVKELFLEQL 81
V +A+ ++ E L
Sbjct: 268 VCEAILRVYEEGL 280
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 117 bits (294), Expect = 6e-34
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
P+LVHCSAG GRTGT+ + G L D +++++V M+++R MVQ EQY +
Sbjct: 224 PILVHCSAGIGRTGTLIGAYAALLHIERGILT-DSTVYSIVAAMKQKRFGMVQRLEQYAV 282
Query: 69 VHQAVKELFLEQLRMIDSH 87
++ V + + S
Sbjct: 283 IYMTVLGRLGVDISGLVST 301
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 116 bits (293), Expect = 7e-34
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
P+++HCSAG GRTGT A+D + +R ++ + LV EMR R++MVQT
Sbjct: 212 ATKSKGPMIIHCSAGVGRTGTFIALDRLLQHIRD---HEFVDILGLVSEMRSYRMSMVQT 268
Query: 63 KEQYILVHQAVKELFLEQLRMI 84
+EQYI +HQ V+ +++++ +
Sbjct: 269 EEQYIFIHQCVQLMWMKKKQQF 290
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 115 bits (291), Expect = 2e-33
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ P++VHCS G GRTGT ID V + K K+ + + +R QR +V++
Sbjct: 220 YRGRSCPIIVHCSDGAGRTGTYILIDMVLNRMA--KGVKEIDIAATLEHVRDQRPGLVRS 277
Query: 63 KEQYILVHQAVKELFLEQLRMI 84
K+Q+ AV E L+ +
Sbjct: 278 KDQFEFALTAVAEEVNAILKAL 299
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 115 bits (290), Expect = 3e-33
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
P++VHCSAG GRTGT C++D L ++F V MR QR +QT EQY
Sbjct: 235 PIVVHCSAGIGRTGTFCSLDICLAQLEE---LGTLNVFQTVSRMRTQRAFSIQTPEQYYF 291
Query: 69 VHQAVKELFLEQLRMIDSHPL 89
++A+ E F E+ M+ +H
Sbjct: 292 CYKAILE-FAEKEGMVSAHHH 311
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 114 bits (288), Expect = 4e-33
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
A+ P++VHCSAG GRTG A L+A + + +V ++R R M+QT
Sbjct: 229 TAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKA---RGEVDILGIVCQLRLDRGGMIQT 285
Query: 63 KEQYILVHQAVKELFLEQL 81
EQY +H + + QL
Sbjct: 286 AEQYQFLHHTLAL-YAGQL 303
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 114 bits (288), Expect = 5e-33
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ P++ HCSAG GR+GT+ ID V GL+ + DF + LVR MR QR MVQT
Sbjct: 235 HIHRSGPIITHCSAGIGRSGTLICIDVVLGLISQ---DLDFDISDLVRCMRLQRHGMVQT 291
Query: 63 KEQYILVHQAVKELF 77
++QYI +Q + +
Sbjct: 292 EDQYIFCYQVILYVL 306
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 113 bits (284), Expect = 6e-33
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
Q S P+ VHCSAG GRTGT CA+ V ++A + +F V+ +R QR MVQT
Sbjct: 172 QQSGNHPITVHCSAGAGRTGTFCALSTVLERVKAEGI---LDVFQTVKSLRLQRPHMVQT 228
Query: 63 KEQYILVHQAVKELF 77
EQY ++ V+E
Sbjct: 229 LEQYEFCYKVVQEYI 243
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 114 bits (288), Expect = 6e-33
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
P++VHCSAG GRTG + + + L N+ + ++R +R+QR+ M+QT QY
Sbjct: 254 PIVVHCSAGVGRTGVLILSELMIYCLEH---NEKVEVPMMLRLLREQRMFMIQTIAQYKF 310
Query: 69 VHQAVKELFLEQLRMI 84
V+Q + + FL+ R+I
Sbjct: 311 VYQVLIQ-FLQNSRLI 325
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 115 bits (289), Expect = 7e-33
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
Q P+LVHCSAG GRTGT AID + + ++ +V ++R R MVQT
Sbjct: 233 QIPPESPILVHCSAGVGRTGTFIAIDRLIYQIEN---ENTVDVYGIVYDLRMHRPLMVQT 289
Query: 63 KEQYILVHQAVKELFLEQ 80
++QY+ ++Q V ++ Q
Sbjct: 290 EDQYVFLNQCVLDIIRAQ 307
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 113 bits (286), Expect = 9e-33
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
++VHCSAG GRTGT ID + ++ + + ++ V +R QR MVQT
Sbjct: 221 NPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHS---ERKVDVYGFVSRIRAQRCQMVQT 277
Query: 63 KEQYILVHQAVKELFLE 79
QY+ ++QA+ E +L
Sbjct: 278 DMQYVFIYQALLEHYLY 294
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 113 bits (286), Expect = 1e-32
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
P ++HCSAG GR+GT +D L+ G D ++ ++ MRK R+ ++QT +Q
Sbjct: 211 PAVIHCSAGIGRSGTFSLVDTCLVLMEKG---DDINIKQVLLNMRKYRMGLIQTPDQLRF 267
Query: 69 VHQAVKELF 77
+ A+ E
Sbjct: 268 SYMAIIEGA 276
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 113 bits (284), Expect = 2e-32
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
P++VH SAG GRTG A LR + + ++R+ R M+QT EQY
Sbjct: 233 PIIVHSSAGIGRTGCFIATSICCQQLRQEGV---VDILKTTCQLRQDRGGMIQTCEQYQF 289
Query: 69 VHQAVKELFLEQL 81
VH + + +QL
Sbjct: 290 VHHVMSL-YEKQL 301
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 112 bits (283), Expect = 2e-32
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
P +VHCSAG GRTGT A+D + L + ++ V ++R R+ MVQT+ QY+
Sbjct: 220 PTVVHCSAGVGRTGTFIALDRILQQLDS---KDSVDIYGAVHDLRLHRVHMVQTECQYVY 276
Query: 69 VHQAVKELFLEQ 80
+HQ V+++ +
Sbjct: 277 LHQCVRDVLRAR 288
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 112 bits (282), Expect = 3e-32
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ PV+VHCSAG GRTG A L+ ++V ++R R MVQT
Sbjct: 218 ASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKE---EGVVDALSIVCQLRVDRGGMVQT 274
Query: 63 KEQYILVHQAVKELF 77
EQY VH A+
Sbjct: 275 SEQYEFVHHALCLFE 289
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 112 bits (282), Expect = 4e-32
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+E P++VHCSAG GR+GT +D +L+ + +F +V MRK+R+ MVQT
Sbjct: 231 IGAEQRPIVVHCSAGVGRSGTFITLDR---ILQQINTSDYVDIFGIVYAMRKERVWMVQT 287
Query: 63 KEQYILVHQAVKELF 77
++QYI +HQ + +
Sbjct: 288 EQQYICIHQCLLAVL 302
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 111 bits (280), Expect = 4e-32
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
E P++VHCSAG GRTG AID + + +F VRE+R QR+ +VQT
Sbjct: 208 NPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAEN---EGVVDIFNCVRELRAQRVNLVQT 264
Query: 63 KEQYILVHQAVKELFLE 79
+EQY+ VH A+ E L
Sbjct: 265 EEQYVFVHDAILEACLC 281
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 112 bits (281), Expect = 6e-32
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ ET PVLVHCSAG GRTGT ID + ++ ++ ++ +R QR +VQT
Sbjct: 242 RMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKD---KSTVNVLGFLKHIRTQRNYLVQT 298
Query: 63 KEQYILVHQAVKELFL 78
+EQYI +H A+ E L
Sbjct: 299 EEQYIFIHDALLEAIL 314
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 110 bits (277), Expect = 3e-30
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ ET PVLVHCSAG GRTGT ID + ++ ++ ++ +R QR +VQT
Sbjct: 224 RMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKD---KSTVNVLGFLKHIRTQRNYLVQT 280
Query: 63 KEQYILVHQAVKELFLEQLRMIDSHP 88
+EQYI +H A+ E L + + S+
Sbjct: 281 EEQYIFIHDALLEAILGKETEVSSNQ 306
Score = 101 bits (254), Expect = 4e-27
Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ P +VH G G +CA+ + L +F + + + R +
Sbjct: 515 ALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENA---VDVFQVAKMINLMRPGVFTD 571
Query: 63 KEQYILVHQAVKELF 77
EQY +++A+ L
Sbjct: 572 IEQYQFIYKAMLSLV 586
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 109 bits (275), Expect = 5e-30
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ P++VH SAG GRTGT ID + L A ++ V ++R+QR MVQ
Sbjct: 219 SNFFSGPIVVHSSAGVGRTGTYIGIDAMLEGLEA---ENKVDVYGYVVKLRRQRCLMVQV 275
Query: 63 KEQYILVHQAVKELFLEQLRMIDSHP 88
+ QYIL+HQA+ E ++
Sbjct: 276 EAQYILIHQALVEYNQFGETEVNLSE 301
Score = 101 bits (254), Expect = 4e-27
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
P+L+HC G +TG CA+ LL + + + +F +V+ +RK R+ MV T EQY
Sbjct: 541 PLLIHCRDGSQQTGIFCALLN---LLESAETEEVVDIFQVVKALRKARLGMVSTFEQYQF 597
Query: 69 VHQAVKELFLEQ 80
++ + + Q
Sbjct: 598 LYDVIASTYPAQ 609
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 109 bits (274), Expect = 8e-30
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ P++VHCSAG GRTG ID + ++ K ++ V MR QR MVQT
Sbjct: 205 NPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKH---EKTVDIYGHVTCMRSQRNYMVQT 261
Query: 63 KEQYILVHQAVKELF 77
++QY+ +H+A+ E
Sbjct: 262 EDQYVFIHEALLEAA 276
Score = 100 bits (251), Expect = 1e-26
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
Q + P+ VHCSAG GRTG + V +R + +F V+ +R QR AMVQT
Sbjct: 496 QFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGV---VDMFQTVKTLRTQRPAMVQT 552
Query: 63 KEQYILVHQAVKELF 77
++QY L ++A E
Sbjct: 553 EDQYQLCYRAALEYL 567
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 103 bits (259), Expect = 2e-28
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIA-MVQTKEQYI 67
++HC G GRTGT+ A + K N +L + + R R M++ Q++
Sbjct: 316 LPMIHCLGGVGRTGTMAAALVL-------KDNPHSNLEQVRADFRDSRNNRMLEDASQFV 368
Query: 68 LVHQAVKELFL 78
+ +L +
Sbjct: 369 QLKAMQAQLLM 379
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 105 bits (263), Expect = 2e-28
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
P++VHCSAG GRTGT ID + ++ A + +F V +R QR MVQT
Sbjct: 219 NPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHA---EQKVDVFEFVSRIRNQRPQMVQT 275
Query: 63 KEQYILVHQAVKELFLEQLRMIDSHPL 89
QY ++QA+ E +L +D L
Sbjct: 276 DMQYTFIYQALLEYYLYGDTELDVSSL 302
Score = 99.7 bits (249), Expect = 2e-26
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
P+ VHCSAG GRTGT A+ + ++A +F V+ +R QR MVQT EQY
Sbjct: 520 PITVHCSAGAGRTGTFIALSNILERVKA---EGLLDVFQAVKSLRLQRPHMVQTLEQYEF 576
Query: 69 VHQAVKEL 76
++ V++
Sbjct: 577 CYKVVQDF 584
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 100 bits (252), Expect = 1e-27
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 2 IQASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIA-MV 60
+ L ++H AG GRT + N S+ +V +MR QR MV
Sbjct: 229 VADDSKLRPVIHSRAGVGRTAQLIGAM-----CMNDSRNSQLSVEDMVSQMRVQRNGIMV 283
Query: 61 QTKEQYILVHQAVKEL 76
Q EQ ++ + +
Sbjct: 284 QKDEQLDVLIKLAEGQ 299
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 65.3 bits (159), Expect = 3e-15
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
LVHC G GRTGTI A + L + + + + E+R R VQT EQ +
Sbjct: 91 GNLVHCVGGIGRTGTILASYLI--------LTEGLEVESAIDEVRLVRPGAVQTYEQEMF 142
Query: 69 VHQ 71
+ +
Sbjct: 143 LLR 145
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 45.8 bits (109), Expect = 7e-08
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
V VHC+ G GRTGT+ A Y L++ + + E+R+ R ++T EQ
Sbjct: 91 AVGVHCALGFGRTGTMLAC-Y---LVKERG----LAAGDAIAEIRRLRPGSIETYEQEKA 142
Query: 69 VHQAVKELFLEQLR 82
V Q F ++ +
Sbjct: 143 VFQ-----FYQRTK 151
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 44.3 bits (104), Expect = 5e-07
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
L+H G GR+ + A LL +R++R +QT +QY
Sbjct: 135 KTLIHSYGGLGRSCLVAACL----LLYLSDTISPEQAIDSLRDLRGSG--AIQTIKQYNY 188
Query: 69 VHQAVKEL 76
+H+ +L
Sbjct: 189 LHEFRDKL 196
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 42.3 bits (99), Expect = 3e-06
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYIL 68
+ VH AG GRTGT+ A + + + +R R V +Q L
Sbjct: 271 AIAVHSKAGLGRTGTLIACYIMKH--------YRMTAAETIAWVRICRPGSVIGPQQQFL 322
Query: 69 VHQAVKELFLEQLRM 83
V + L+LE
Sbjct: 323 VMKQ-TNLWLEGDYF 336
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 39.4 bits (91), Expect = 4e-05
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 2 IQASETLP----VLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRI 57
I + T+P + HC AG GRT A+ + +++ N D SL ++
Sbjct: 521 INFTRTMPANAWLHFHCQAGAGRTTAYMAM---YDMMK----NPDVSLGDILSRQYLLGG 573
Query: 58 AMVQTKEQYILVHQAVKELFLEQLRMIDS 86
V + Q + + ++ MI+
Sbjct: 574 NYVAYEIAKPKPDQWKADYYHQKAHMIEK 602
Score = 37.1 bits (85), Expect = 3e-04
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ + HC AG GRT + + K KD S +++ + I +
Sbjct: 228 SLPKDAWLHYHCYAGMGRTTIFMVMHDIL------KNAKDVSFDDIIQRQKLIGIVDLSE 281
Query: 63 KEQ 65
Sbjct: 282 IPD 284
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 37.0 bits (86), Expect = 1e-04
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 10 VLVHCSAGCGRTGTICA 26
V VHC AG R+ T+ A
Sbjct: 92 VYVHCKAGRSRSATMVA 108
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 36.2 bits (83), Expect = 4e-04
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 8/48 (16%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQR 56
+ VHC+ G RTG + V D+S+ V + R
Sbjct: 143 LIGVHCTHGFNRTGFLICAFLVE--------KMDWSIEAAVATFAQAR 182
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 36.1 bits (83), Expect = 4e-04
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQ 65
+ VHC AG GR + A+ V + S + +R++R + +
Sbjct: 111 TIGVHCVAGLGRAPILVALALVE--------YGNVSALDAIALIREKRKGAINQTQM 159
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 34.9 bits (79), Expect = 0.001
Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQT 62
+ +HC AG GRTG + LL GK K E+R + V
Sbjct: 107 SEDDNHVAAIHCKAGKGRTGVMICA----YLLHRGKFLKAQEALDFYGEVRTRDKKGVTI 162
Query: 63 KEQYILVHQ 71
Q V+
Sbjct: 163 PSQRRYVYY 171
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 33.2 bits (75), Expect = 0.004
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1 VIQASETLPVLVHCSAGCGRTGTICAI 27
V+ + PVL+HC G RTG +
Sbjct: 86 VLLDEKNHPVLIHCKRGKHRTGCLVGC 112
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 33.1 bits (75), Expect = 0.005
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 9/57 (15%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQ 65
+ VHC AG GR + A+ + V+ +R++R +K+
Sbjct: 98 CIAVHCVAGLGRAPVLVALALIE---------GGMKYEDAVQFIRQKRRGAFNSKQL 145
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 33.1 bits (75), Expect = 0.005
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 10/60 (16%)
Query: 9 PVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTK-EQYI 67
+ VHC AG GR + A+ + V+ +R++R +K Y+
Sbjct: 119 CIAVHCVAGLGRAPVLVALALIE---------GGMKYEDAVQFIRQKRRGAFNSKQLLYL 169
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 32.8 bits (74), Expect = 0.007
Identities = 14/83 (16%), Positives = 25/83 (30%), Gaps = 11/83 (13%)
Query: 2 IQASETLP----VLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRI 57
+ TLP + H AG GRT + +L+ N SL ++ +
Sbjct: 204 LAFYRTLPQDAWLHFHSEAGVGRTTAFMVM---TDMLK----NPSVSLKDILYRQHEIGG 256
Query: 58 AMVQTKEQYILVHQAVKELFLEQ 80
+ K + +
Sbjct: 257 FYYGEFPIKTKDKDSWKTKYYRE 279
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 32.7 bits (73), Expect = 0.008
Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 9/75 (12%)
Query: 2 IQASETLPVLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMR-----KQR 56
+ + + +H G GRTGT+ + LL GK + R
Sbjct: 114 MTSDPDHVIAIHSKGGKGRTGTLVSS----WLLEDGKFDTAKEALEYFGSRRTDFEVGDV 169
Query: 57 IAMVQTKEQYILVHQ 71
V+T Q V
Sbjct: 170 FQGVETASQIRYVGY 184
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 32.2 bits (73), Expect = 0.011
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 2 IQASETLPVLVHCSAGCGRTGTICA 26
+ + V VHC+ G RTG +
Sbjct: 108 TEKCPGMLVGVHCTHGINRTGYMVC 132
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 32.2 bits (72), Expect = 0.013
Identities = 6/62 (9%), Positives = 19/62 (30%), Gaps = 7/62 (11%)
Query: 10 VLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYILV 69
+VHC G + + +++ ++ R + +R + + +
Sbjct: 118 CVVHCLDGRAASSILVGAMFIF---CNLYSTPGPAV----RLLYAKRPGIGLSPSHRRYL 170
Query: 70 HQ 71
Sbjct: 171 GY 172
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint
center for structural genomics, JCSG; HET: MSE; 1.40A
{Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Length = 157
Score = 31.5 bits (71), Expect = 0.016
Identities = 7/27 (25%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 1 VIQASETLPVLVHCSAGCGRTGTICAI 27
+ + VLVHC A R +
Sbjct: 91 AMDQHKGKDVLVHCLANY-RASAFAYL 116
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 31.3 bits (70), Expect = 0.021
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 9 PVLVHCSAGCGRTGTIC 25
VH +AG GR +
Sbjct: 108 VTYVHSTAGMGRAPAVA 124
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase,
dual specifici phosphatase; 1.88A {Homo sapiens}
Length = 190
Score = 30.8 bits (70), Expect = 0.031
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
LVHC+AG R+ T+C I Y+ LL A + V+ R
Sbjct: 106 TLVHCAAGVSRSATLC-IAYLMKFHNVCLLEA---------YNWVKARR 144
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase;
2.70A {Homo sapiens}
Length = 211
Score = 30.9 bits (70), Expect = 0.032
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
VLVH AG R+ TIC + Y+ + L A F +++ R
Sbjct: 86 VLVHSEAGISRSPTIC-MAYLMKTKQFRLKEA---------FDYIKQRR 124
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure,
hydrolase; HET: EPE; 2.00A {Homo sapiens}
Length = 188
Score = 30.7 bits (70), Expect = 0.037
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
L+HC+AG R+ +C + Y+ LL A T + R
Sbjct: 100 TLLHCAAGVSRSAALC-LAYLMKYHAMSLLDA---------HTWTKSCR 138
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase,
nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A
Length = 144
Score = 30.2 bits (69), Expect = 0.038
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
VLVH AG R+ TIC + Y+ L A F V++ R
Sbjct: 84 VLVHSQAGISRSATIC-LAYLMMKKRVRLEEA---------FEFVKQRR 122
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Mus musculus}
Length = 164
Score = 30.3 bits (69), Expect = 0.039
Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
LV+C G R+ +C Y+ L RA F +V+ R
Sbjct: 92 CLVYCKNGRSRSAAVC-TAYLMRHRGHSLDRA---------FQMVKSAR 130
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded
B-sheet, hydrolase; 2.80A {Homo sapiens}
Length = 177
Score = 30.3 bits (69), Expect = 0.041
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
+L+HC AG R+ TI I Y+ + A + V+ R
Sbjct: 90 LLIHCQAGVSRSATIV-IAYLMKHTRMTMTDA---------YKFVKGKR 128
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 30.3 bits (67), Expect = 0.044
Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 5/21 (23%)
Query: 71 QAVKELFLE-QLRMI--DSHP 88
QA+K+ L+ L++ DS P
Sbjct: 20 QALKK--LQASLKLYADDSAP 38
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase,
structural genomics, PSI-2, protein structure
initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Length = 155
Score = 30.2 bits (69), Expect = 0.048
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
VLVH AG R+ T+ + Y+ L A + LV+ +
Sbjct: 88 VLVHSLAGVSRSVTVT-VAYLMQKLHLSLNDA---------YDLVKRKK 126
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 30.0 bits (68), Expect = 0.049
Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 33/82 (40%)
Query: 10 VLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYILV 69
VLVH +AG R+G + + Y+ M K + ++ V
Sbjct: 111 VLVHSAAGVNRSGAMI-LAYL---------------------MSKNK--ESLPMLYFLYV 146
Query: 70 HQAVKEL---------FLEQLR 82
+ ++++L F Q+
Sbjct: 147 YHSMRDLRGAFVENPSFKRQII 168
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 29.9 bits (68), Expect = 0.051
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
+L+HC AG R+ TI I Y+ + A + V+ R
Sbjct: 86 LLIHCQAGVSRSATIV-IAYLMKHTRMTMTDA---------YKFVKGKR 124
>3emu_A Leucine rich repeat and phosphatase domain containing protein;
structural genomics, hydrolase, PSI-2, protein structure
initiative; 2.30A {Entamoeba histolytica}
Length = 161
Score = 29.9 bits (68), Expect = 0.052
Identities = 8/49 (16%), Positives = 15/49 (30%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
VL+ G + I I ++ + A F V+ +
Sbjct: 90 VLIISGTGVNKAPAIV-IAFLMYYQRLSFINA---------FNKVQGLY 128
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 30.1 bits (68), Expect = 0.053
Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 15/51 (29%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMRKQ 55
+L+H G R+ T+ I Y+ L + + L++ +
Sbjct: 120 ILIHAQCGLSRSATLI-IAYIMKYHNLSLRHS---------YDLLKSRADK 160
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 29.7 bits (67), Expect = 0.089
Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 33/82 (40%)
Query: 10 VLVHCSAGCGRTGTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYILV 69
VLVHC+AG R+G + + Y+ M K + ++ V
Sbjct: 128 VLVHCAAGVNRSGAMI-LAYL---------------------MSKNK--ESLPMLYFLYV 163
Query: 70 HQAVKEL---------FLEQLR 82
+ ++++L F Q+
Sbjct: 164 YHSMRDLRGAFVENPSFKRQII 185
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 29.3 bits (66), Expect = 0.10
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 13/48 (27%)
Query: 10 VLVHCSAGCGRTGTICA----IDYVWGLLRAGKLNKDFSLFTLVREMR 53
VLVHC+ G R+ T+ I L+ A V+ R
Sbjct: 134 VLVHCAMGVSRSATLVLAFLMIYENMTLVEA---------IQTVQAHR 172
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.4 bits (65), Expect = 0.11
Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 19/95 (20%)
Query: 10 VLVHCSAGCGRT----------GTICAIDY--VWGLLRAGKLNKDFSLF----TLVREMR 53
VL+ G G+T C +D+ W L N ++ L+ ++
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW--LNLKNCNSPETVLEMLQKLLYQID 210
Query: 54 KQRIAMVQTKEQYILVHQAVKELFLEQLRMIDSHP 88
+ L +++ L +L +
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQA-ELRRLLKSKPYE 244
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES;
1.50A {Homo sapiens}
Length = 165
Score = 29.1 bits (66), Expect = 0.11
Identities = 13/48 (27%), Positives = 16/48 (33%), Gaps = 13/48 (27%)
Query: 10 VLVHCSAGCGRTGTICA----IDYVWGLLRAGKLNKDFSLFTLVREMR 53
LVHC AG R+ T+ +G A VR R
Sbjct: 86 CLVHCLAGVSRSVTLVIAYIMTVTDFGWEDA---------LHTVRAGR 124
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase;
2.10A {Homo sapiens}
Length = 145
Score = 29.1 bits (66), Expect = 0.11
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
LVH G R+ + I Y W L RA + V+E R
Sbjct: 84 CLVHSKMGVSRSASTV-IAYAMKEYGWNLDRA---------YDYVKERR 122
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 29.2 bits (66), Expect = 0.13
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
VLVHC G R+ T+ I Y+ + A ++VR+ R
Sbjct: 118 VLVHCREGYSRSPTLV-IAYLMMRQKMDVKSA---------LSIVRQNR 156
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 28.7 bits (65), Expect = 0.14
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 13/48 (27%)
Query: 10 VLVHCSAGCGRTGTICA----IDYVWGLLRAGKLNKDFSLFTLVREMR 53
+LVHC+ G R+ T+ + + L+ A V++ R
Sbjct: 88 ILVHCAVGVSRSATLVLAYLMLYHHLTLVEA---------IKKVKDHR 126
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 28.3 bits (64), Expect = 0.18
Identities = 10/48 (20%), Positives = 13/48 (27%), Gaps = 13/48 (27%)
Query: 10 VLVHCSAGCGRTGTICA----IDYVWGLLRAGKLNKDFSLFTLVREMR 53
LVH AG R+ TI G ++ R
Sbjct: 87 CLVHSFAGISRSTTIVTAYVMTVTGLGWRDV---------LEAIKATR 125
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Length = 219
Score = 28.5 bits (64), Expect = 0.20
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 15/49 (30%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMR 53
+LVHC G R+ T+ + Y+ L+ A V + R
Sbjct: 142 ILVHCVMGRSRSATLV-LAYLMIHKDMTLVDA---------IQQVAKNR 180
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine
phosphatase, hydrolase; 1.26A {Homo sapiens}
Length = 144
Score = 27.9 bits (63), Expect = 0.28
Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 15/51 (29%)
Query: 10 VLVHCSAGCGRTGTICAIDYV-----WGLLRAGKLNKDFSLFTLVREMRKQ 55
VLVH +AG R I I ++ A F+LV+ R
Sbjct: 84 VLVHSNAGVSRAAAIV-IGFLMNSEQTSFTSA---------FSLVKNARPS 124
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel
beta sheet with flanking helices, structural genomics,
PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5
PDB: 2oz5_A*
Length = 296
Score = 28.0 bits (61), Expect = 0.34
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 3 QASETLPVLVHCSAGCGRTGTICAI 27
+ PVL HC AG RTG + A+
Sbjct: 169 LLAAGRPVLTHCFAGKDRTGFVVAL 193
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics,
phosphatase, PSI-2, protein structure initiative; 1.60A
{Homo sapiens}
Length = 154
Score = 27.6 bits (62), Expect = 0.40
Identities = 12/48 (25%), Positives = 16/48 (33%), Gaps = 13/48 (27%)
Query: 10 VLVHCSAGCGRTGTICA----IDYVWGLLRAGKLNKDFSLFTLVREMR 53
VLVH +AG R+ + A F V+E R
Sbjct: 93 VLVHGNAGISRSAAFVIAYIMETFGMKYRDA---------FAYVQERR 131
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 27.0 bits (59), Expect = 0.72
Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 9/42 (21%)
Query: 50 REMRKQRIAM---VQTKEQYILVHQAVKEL------FLEQLR 82
RE +++R+ + +A K+L EQ+
Sbjct: 91 REEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVE 132
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann
fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A*
1ad3_A*
Length = 469
Score = 27.1 bits (61), Expect = 0.77
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 66 YILVHQAVKELFLEQLR 82
YIL +++ +E+L+
Sbjct: 265 YILCDPSIQNQIVEKLK 281
>3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU
NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A*
3u75_A* 3u14_A*
Length = 509
Score = 26.4 bits (58), Expect = 1.4
Identities = 7/42 (16%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 44 SLFTLVREMRKQRIAMVQTKEQYILVHQAVKE---LFLEQLR 82
S +L R + + +Q L+ V +++L+
Sbjct: 301 SSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLK 342
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat,
lysine dimethylation, protein binding; HET: MLY; 1.80A
{Escherichia coli} PDB: 3qdn_A*
Length = 287
Score = 25.9 bits (57), Expect = 1.6
Identities = 7/20 (35%), Positives = 10/20 (50%), Gaps = 1/20 (5%)
Query: 1 VIQASETLPVLVHC-SAGCG 19
V++ S T PVL + S
Sbjct: 20 VLEQSMTTPVLFYFWSERSQ 39
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 25.8 bits (56), Expect = 2.7
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 18/57 (31%)
Query: 22 GTICAIDYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMVQTKEQYILVHQAVKE-LF 77
G + A+D V +L K Q+I +++ ++ L + V+ LF
Sbjct: 1857 GDLRALDTVTNVL---NFIK------------LQKIDIIELQKSLSL--EEVEGHLF 1896
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily,
lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A
2iex_A
Length = 289
Score = 24.9 bits (55), Expect = 4.3
Identities = 7/33 (21%), Positives = 9/33 (27%), Gaps = 1/33 (3%)
Query: 28 DYVWGLLRAGKLNKDFSLFTLVREMRKQRIAMV 60
LN +R K +AMV
Sbjct: 99 GGYKDDSGVHHLNV-LDFQRQIRTCPKPVVAMV 130
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A
{Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB:
1pxt_A
Length = 393
Score = 24.8 bits (55), Expect = 4.4
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 47 TLVREMRKQRIAMV 60
T++RE++K +I +V
Sbjct: 363 TILRELKKDQIGVV 376
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein,
thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus
musculus}
Length = 135
Score = 23.7 bits (51), Expect = 8.3
Identities = 5/21 (23%), Positives = 8/21 (38%), Gaps = 1/21 (4%)
Query: 1 VIQASETLPVLVHCSA-GCGR 20
V A + L V++H
Sbjct: 24 VTNAEKDLWVVIHLYRSSVPM 44
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.327 0.139 0.415
Gapped
Lambda K H
0.267 0.0418 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,347,805
Number of extensions: 66366
Number of successful extensions: 415
Number of sequences better than 10.0: 1
Number of HSP's gapped: 380
Number of HSP's successfully gapped: 93
Length of query: 89
Length of database: 6,701,793
Length adjustment: 57
Effective length of query: 32
Effective length of database: 5,110,296
Effective search space: 163529472
Effective search space used: 163529472
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (24.2 bits)