BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5453
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08BG7|SCOCA_DANRE Short coiled-coil protein A OS=Danio rerio GN=scoca PE=3 SV=1
Length = 119
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 62/67 (92%)
Query: 72 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENLMSASSVFQST 131
EQEEK RLI+QVLELQ+TL+DLS RVD+VKEENL+L+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 53 EQEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 112
Query: 132 SPKSGKK 138
KS +K
Sbjct: 113 DTKSKRK 119
>sp|Q5XJK1|SCOCB_DANRE Short coiled-coil protein B OS=Danio rerio GN=scocb PE=3 SV=1
Length = 76
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Query: 64 LDPDVSPD-EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENLM 122
+D D+ E EEK RLI+QVLELQNTL+DLS RVD+VKEENL+L+SENQVLGQYIENLM
Sbjct: 1 MDGDIENQVELEEKTRLINQVLELQNTLEDLSARVDAVKEENLKLKSENQVLGQYIENLM 60
Query: 123 SASSVFQSTSPKSGKK 138
SASSVFQ+T KS +K
Sbjct: 61 SASSVFQTTDSKSKRK 76
>sp|Q78YZ6|SCOC_MOUSE Short coiled-coil protein OS=Mus musculus GN=Scoc PE=2 SV=1
Length = 125
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 61/67 (91%)
Query: 72 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENLMSASSVFQST 131
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENL+L+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 59 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 118
Query: 132 SPKSGKK 138
KS +K
Sbjct: 119 DTKSKRK 125
>sp|Q5RJZ6|SCOC_RAT Short coiled-coil protein OS=Rattus norvegicus GN=Scoc PE=2 SV=1
Length = 122
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 6/102 (5%)
Query: 41 ADHSLDSISSSFTNSSSSPGRNSLDPDVSPDEQ----EEKARLISQVLELQNTLDDLSQR 96
DHSL S+ S P + D D E EEK RLI+QVLELQ+TL+DLS R
Sbjct: 23 TDHSLKSLHSG--AERLFPKMMNADMDAVDAENQVELEEKTRLINQVLELQHTLEDLSAR 80
Query: 97 VDSVKEENLRLRSENQVLGQYIENLMSASSVFQSTSPKSGKK 138
VD+VKEENL+L+SENQVLGQYIENLMSASSVFQ+T KS +K
Sbjct: 81 VDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 122
>sp|A8NJZ7|SCOC_BRUMA Short coiled-coil protein homolog OS=Brugia malayi GN=Bm1_04115
PE=3 SV=1
Length = 122
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/65 (81%), Positives = 61/65 (93%)
Query: 71 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENLMSASSVFQS 130
D+QEEKARLISQVLELQNTLDDLSQRVDSVKEE+L+LRSENQVLGQYI+NLM++S+VFQ
Sbjct: 54 DDQEEKARLISQVLELQNTLDDLSQRVDSVKEESLKLRSENQVLGQYIQNLMASSAVFQP 113
Query: 131 TSPKS 135
K+
Sbjct: 114 AQSKA 118
>sp|Q9UIL1|SCOC_HUMAN Short coiled-coil protein OS=Homo sapiens GN=SCOC PE=1 SV=2
Length = 159
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 61/67 (91%)
Query: 72 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENLMSASSVFQST 131
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENL+L+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 93 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 152
Query: 132 SPKSGKK 138
KS +K
Sbjct: 153 DTKSKRK 159
>sp|Q5VS72|ANM7_ORYSJ Protein arginine N-methyltransferase 7 OS=Oryza sativa subsp.
japonica GN=PRMT7 PE=2 SV=1
Length = 720
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 71 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSE-----NQVLGQYIENLMSAS 125
D E++ RL+S+ ++ D +R DS +E N+++R+ + ++ ++ L SA
Sbjct: 266 DALEDEIRLLSEPFKVFEF--DFWKRPDSHREANIKIRTTRDGYVHAIISWWVLQLDSAG 323
Query: 126 SVFQSTSPKSGKK 138
S+F ST+P+ ++
Sbjct: 324 SIFYSTAPRWARQ 336
>sp|A2Y8B9|ANM7_ORYSI Protein arginine N-methyltransferase 7 OS=Oryza sativa subsp.
indica GN=PRMT7 PE=3 SV=3
Length = 720
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 71 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSE-----NQVLGQYIENLMSAS 125
D E++ RL+S+ ++ D +R DS +E N+++++ + ++ ++ L SA
Sbjct: 266 DALEDEIRLLSEPFKVFEF--DFWKRPDSHREANIKIQTTRDGYVHAIISWWVLQLDSAG 323
Query: 126 SVFQSTSPKSGKK 138
S+F ST+P+ ++
Sbjct: 324 SIFYSTAPRWARQ 336
>sp|Q9WUF3|C8AP2_MOUSE CASP8-associated protein 2 OS=Mus musculus GN=Casp8ap2 PE=1 SV=2
Length = 1962
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 34 NSEGPIRADHSLDSISSSFTNSSSSPGRNSLDPDVSPDEQEEKAR------LISQVLELQ 87
N EG + LDS S T S RN LD +E A+ L + + Q
Sbjct: 25 NDEGSLDIYAGLDSAVSDSTARSCVSFRNCLDLYEEILTEEGTAKEATYNDLQIEYGKCQ 84
Query: 88 NTLDDLSQRVDSVKEENLRLRSENQVLGQYIENLMSASSV 127
+ DL +R ++ +NL L++ENQ L + I L+ + V
Sbjct: 85 QQMKDLMKRFKEIQTQNLNLKNENQSLKKNISALIKTARV 124
>sp|Q9P209|CEP72_HUMAN Centrosomal protein of 72 kDa OS=Homo sapiens GN=CEP72 PE=1 SV=2
Length = 647
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 71 DEQEEKARLISQVL-ELQNT---LDDLSQRVDSVKEENLRLRS 109
++Q++ AR +S+V EL +T LDDL Q +D EEN RL+S
Sbjct: 490 EQQQQHAREMSEVTAELHHTHKELDDLRQHLDKSLEENSRLKS 532
>sp|Q5RA25|NF2L1_PONAB Nuclear factor erythroid 2-related factor 1 OS=Pongo abelii
GN=NFE2L1 PE=2 SV=1
Length = 772
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 71 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENL-RLRSEN 111
D Q +KARL+ + +E +L + Q+V S+ +E RLR EN
Sbjct: 688 DLQRDKARLLREKVEFLRSLRQMKQKVQSLYQEVFGRLRDEN 729
>sp|Q14494|NF2L1_HUMAN Nuclear factor erythroid 2-related factor 1 OS=Homo sapiens
GN=NFE2L1 PE=1 SV=1
Length = 772
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 71 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENL-RLRSEN 111
D Q +KARL+ + +E +L + Q+V S+ +E RLR EN
Sbjct: 688 DLQRDKARLLREKVEFLRSLRQMKQKVQSLYQEVFGRLRDEN 729
>sp|A5D7E9|NF2L1_BOVIN Nuclear factor erythroid 2-related factor 1 OS=Bos taurus GN=NFE2L1
PE=2 SV=1
Length = 763
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 71 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENL-RLRSEN 111
D Q +KARL+ + +E +L + Q+V S+ +E RLR EN
Sbjct: 679 DLQRDKARLLREKVEFLRSLRQMKQKVQSLYQEVFGRLRDEN 720
>sp|Q9FGX2|BZIP1_ARATH Basic leucine zipper 1 OS=Arabidopsis thaliana GN=BZIP1 PE=1 SV=1
Length = 145
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 93 LSQRVDSVKEENLRLRSENQVLGQYI---ENLMSASSV 127
+ QR+DSV+ EN LRSE L Y+ EN+++ +S+
Sbjct: 63 VKQRLDSVETENAGLRSEKIWLSSYVSDLENMIATTSL 100
>sp|Q9XSC2|GTR3_RABIT Solute carrier family 2, facilitated glucose transporter member 3
(Fragment) OS=Oryctolagus cuniculus GN=SLC2A3 PE=2 SV=1
Length = 400
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 71 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQV 113
+++E++A+ I Q+L+ D++Q + +KEE+ R+R E QV
Sbjct: 118 NKEEDEAKQILQILQRLWGTQDVAQDIQEMKEESARMRQEKQV 160
>sp|A5HY79|SYL_CLOBH Leucine--tRNA ligase OS=Clostridium botulinum (strain Hall / ATCC
3502 / NCTC 13319 / Type A) GN=leuS PE=3 SV=1
Length = 813
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 5 IKISEDINNIPLADDDPQAIISDEVESSQNSEGPIRADHSLDSISS 50
I I+ I N + DP+A+I DEVE + G IRA ++ + SS
Sbjct: 729 IGINSSIFNEKWPEFDPKALIKDEVEIAVQVNGKIRAKINISTSSS 774
>sp|A7FPP5|SYL_CLOB1 Leucine--tRNA ligase OS=Clostridium botulinum (strain ATCC 19397 /
Type A) GN=leuS PE=3 SV=1
Length = 813
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 5 IKISEDINNIPLADDDPQAIISDEVESSQNSEGPIRADHSLDSISS 50
I I+ I N + DP+A+I DEVE + G IRA ++ + SS
Sbjct: 729 IGINSSIFNEKWPEFDPKALIKDEVEIAVQVNGKIRAKINISTSSS 774
>sp|B8E0R9|SYS_DICTD Serine--tRNA ligase OS=Dictyoglomus turgidum (strain Z-1310 / DSM
6724) GN=serS PE=3 SV=1
Length = 425
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 13 NIPLADDDPQAIISDEVESSQNSEGPIRADHSLDSISSSFTNSSSSPGRNSLDPDVSPDE 72
NI L + DPQ D + I D S+ N + RN + ++ +
Sbjct: 17 NIILRNLDPQKYDVDYI---------IELDAKRRSLQKELDNLRAQ--RNKISQEIGKHQ 65
Query: 73 QEEKARLISQVLELQNTLDDLSQRVDSVKEE 103
EE+ +LI + L+ +++L++ D+V++E
Sbjct: 66 GEEREKLIKEAKILKEKIEELAKEYDNVEKE 96
>sp|Q6CQ91|PP4R3_KLULA Serine/threonine-protein phosphatase 4 regulatory subunit 3
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PSY2 PE=3
SV=1
Length = 749
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 4 KIKISEDINNIPLADDDPQAIISDEVESSQNSEGPIRADHSLDSISSSFTNSSSSPGRNS 63
+++ +D+ + DD ISD + S QNS L S++F N S +
Sbjct: 298 RLQFLKDVVLVRFLDDQSFTFISDLMLSYQNSIIDF-----LQEDSNNFINQVISMYKVE 352
Query: 64 LDPDVSPDEQEEKARLISQVLELQNTLDDLSQRV 97
D V+PD++ + +L+ + ++L L+ + + +
Sbjct: 353 EDSTVTPDKRRDGIKLLHECIQLSQNLNSIEKTL 386
>sp|A7G9T9|SYL_CLOBL Leucine--tRNA ligase OS=Clostridium botulinum (strain Langeland /
NCTC 10281 / Type F) GN=leuS PE=3 SV=1
Length = 813
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 5 IKISEDINNIPLADDDPQAIISDEVESSQNSEGPIRADHSLDSISS 50
I I+ I N + DP+A+I DEVE + G IRA ++ + SS
Sbjct: 729 IGINSSIFNEKWPEFDPKALIKDEVEIAVQVNGKIRAKINIYTSSS 774
>sp|Q08379|GOGA2_HUMAN Golgin subfamily A member 2 OS=Homo sapiens GN=GOLGA2 PE=1 SV=3
Length = 1002
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 78 RLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENLMSASSVFQ 129
+L S+ +EL DL +RV+ ++ ++L E +G+YI S +V +
Sbjct: 807 KLQSRFMELMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLK 858
>sp|P96721|YWQI_BACSU Uncharacterized protein YwqI OS=Bacillus subtilis (strain 168)
GN=ywqI PE=4 SV=1
Length = 86
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 44 SLDSISSSFTN----SSSSPGRNSLDPDVSPDEQEE--KARLISQVLELQNTLDDLSQRV 97
+LDS+ + + ++ S G+NSLD E+EE K L +Q ++D V
Sbjct: 14 TLDSVKDALADVSIGAAGSNGKNSLDYTKKYHEREENIKTMLGDYKKAVQKNIEDTKDNV 73
Query: 98 DSVKEEN 104
DS+KE++
Sbjct: 74 DSLKEQD 80
>sp|P93283|M140_ARATH Uncharacterized mitochondrial protein AtMg00140 OS=Arabidopsis
thaliana GN=AtMg00140 PE=4 SV=1
Length = 167
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 65 DPDVSPDEQEEKARLISQVLELQNTLDDLSQRVDSVKEE 103
DP V PD QE+KA L +Q+ + + L RV +++E
Sbjct: 78 DPTVLPDLQEKKAILGTQIEMITQAMTTLESRVTDLQQE 116
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.303 0.122 0.315
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,054,141
Number of Sequences: 539616
Number of extensions: 1707803
Number of successful extensions: 9501
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 247
Number of HSP's that attempted gapping in prelim test: 8965
Number of HSP's gapped (non-prelim): 736
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 55 (25.8 bits)