Query psy5453
Match_columns 138
No_of_seqs 94 out of 96
Neff 3.3
Searched_HMMs 13730
Date Fri Aug 16 17:57:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5453.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5453hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2p90a1 c.56.8.1 (A:6-274) Hyp 74.3 0.82 6E-05 34.1 2.5 43 81-123 217-259 (269)
2 d3buxb2 a.48.1.1 (B:48-177) N- 64.0 4.5 0.00032 28.9 4.5 18 108-125 62-79 (130)
3 d1nkpa_ a.38.1.1 (A:) Myc prot 53.0 13 0.00097 23.0 5.0 26 96-121 60-85 (88)
4 d1nkpa_ a.38.1.1 (A:) Myc prot 51.5 23 0.0017 21.8 7.0 38 78-115 49-86 (88)
5 d1nkpb_ a.38.1.1 (B:) Max prot 50.1 24 0.0017 21.5 6.0 33 80-119 46-78 (83)
6 d1am9a_ a.38.1.1 (A:) SREBP-1a 49.0 21 0.0015 21.9 5.5 25 96-120 51-75 (80)
7 d2spca_ a.7.1.1 (A:) Spectrin 48.1 24 0.0017 21.0 7.5 47 77-123 39-89 (107)
8 d1uklc_ a.38.1.1 (C:) SREBP-2 45.2 16 0.0012 21.5 4.3 13 99-111 44-56 (61)
9 d1nkpb_ a.38.1.1 (B:) Max prot 43.6 20 0.0015 21.9 4.7 31 91-121 43-73 (83)
10 d1hcia4 a.7.1.1 (A:633-746) al 42.4 7.6 0.00056 24.3 2.5 42 77-118 40-81 (114)
11 d1seta1 a.2.7.1 (A:1-110) Sery 41.0 37 0.0027 21.5 6.0 30 92-121 68-97 (110)
12 d1u5pa1 a.7.1.1 (A:1662-1771) 39.4 28 0.002 20.9 4.9 51 72-122 33-87 (110)
13 d1owaa_ a.7.1.1 (A:) Spectrin 38.3 43 0.0031 21.1 6.0 46 77-122 88-133 (156)
14 d1ez3a_ a.47.2.1 (A:) Syntaxin 37.4 43 0.0031 21.4 5.9 29 79-107 8-36 (124)
15 d2azeb1 e.63.1.2 (B:201-301) T 30.3 30 0.0022 22.7 4.1 22 97-118 3-24 (101)
16 d2p90a1 c.56.8.1 (A:6-274) Hyp 29.4 41 0.003 24.2 5.1 35 77-111 227-261 (269)
17 d1yf2a2 d.287.1.2 (A:221-425) 28.5 54 0.0039 20.5 5.1 26 98-123 169-194 (205)
18 d1s35a2 a.7.1.1 (A:1169-1273) 28.5 55 0.004 19.4 6.2 51 71-121 30-80 (105)
19 d1nlwa_ a.38.1.1 (A:) Mad prot 28.4 56 0.0041 19.5 5.6 30 80-116 46-75 (79)
20 d2oa5a1 d.362.1.1 (A:7-102) Un 26.4 25 0.0018 23.5 3.1 23 97-119 4-26 (96)
21 d1u5pa2 a.7.1.1 (A:1772-1872) 26.0 59 0.0043 18.9 6.5 51 72-122 29-83 (101)
22 d2jf2a1 b.81.1.1 (A:1-262) UDP 25.8 26 0.0019 25.3 3.4 43 79-121 211-253 (262)
23 d1vf6a_ a.194.1.1 (A:) Associa 25.7 40 0.0029 20.7 3.8 21 78-98 34-54 (58)
24 d1am9a_ a.38.1.1 (A:) SREBP-1a 25.4 67 0.0049 19.3 5.5 28 80-107 49-76 (80)
25 d2esha1 a.4.5.61 (A:4-117) Hyp 25.2 50 0.0037 21.1 4.5 34 70-103 81-114 (114)
26 d1quua1 a.7.1.1 (A:1-124) alph 24.6 71 0.0052 19.4 7.2 51 71-121 45-95 (124)
27 d2jn6a1 a.4.1.19 (A:1-89) Unch 23.7 6.1 0.00045 24.6 -0.5 19 96-114 67-85 (89)
28 d1ydxa1 d.287.1.2 (A:1-193) Bi 23.2 75 0.0054 20.1 5.1 18 90-107 153-170 (193)
29 d1io1a_ e.32.1.1 (A:) Phase 1 20.4 52 0.0038 22.5 3.9 26 71-96 48-73 (395)
No 1
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=74.31 E-value=0.82 Score=34.07 Aligned_cols=43 Identities=14% Similarity=0.205 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHhh
Q psy5453 81 SQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENLMS 123 (138)
Q Consensus 81 ~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~Lq~YI~NLMs 123 (138)
.++..|.=.+..|..+.++++++.+++..+|+-|++||+.|-.
T Consensus 217 ~~~~gl~id~~~L~e~Ae~~e~~i~~l~e~~~e~~~~v~~LE~ 259 (269)
T d2p90a1 217 ADSADLNLPLLALERDAEKVHRQLMEQTEESSEIQRVVGALEQ 259 (269)
T ss_dssp HHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHCCCCChHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 3344444456788999999999999999999999999999865
No 2
>d3buxb2 a.48.1.1 (B:48-177) N-terminal domain of cbl (N-cbl) {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.96 E-value=4.5 Score=28.90 Aligned_cols=18 Identities=33% Similarity=0.560 Sum_probs=15.6
Q ss_pred hhhhHhHHHHHHHHhhcc
Q psy5453 108 RSENQVLGQYIENLMSAS 125 (138)
Q Consensus 108 ~sENq~Lq~YI~NLMssS 125 (138)
=+||+||.=||.|||+.+
T Consensus 62 l~e~ey~~iyl~nL~~K~ 79 (130)
T d3buxb2 62 LGENEYFRVFMENLMKKT 79 (130)
T ss_dssp HHHCHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHH
Confidence 378999999999999754
No 3
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.04 E-value=13 Score=23.04 Aligned_cols=26 Identities=23% Similarity=0.265 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHH
Q psy5453 96 RVDSVKEENLRLRSENQVLGQYIENL 121 (138)
Q Consensus 96 RVd~VKeE~~KL~sENq~Lq~YI~NL 121 (138)
++.....+.+.|..+|+.|..=|..|
T Consensus 60 ~~~~l~~~~~~l~~~~~~L~~~l~~L 85 (88)
T d1nkpa_ 60 EEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444555566666666666555544
No 4
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.52 E-value=23 Score=21.83 Aligned_cols=38 Identities=18% Similarity=0.303 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHH
Q psy5453 78 RLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLG 115 (138)
Q Consensus 78 ~Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~Lq 115 (138)
.-+..|..||.-+..|...++..+.+++.|..+-..|+
T Consensus 49 ~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L~ 86 (88)
T d1nkpa_ 49 KATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLG 86 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33566788888888888888888888888888776664
No 5
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.13 E-value=24 Score=21.54 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHH
Q psy5453 80 ISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIE 119 (138)
Q Consensus 80 i~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~Lq~YI~ 119 (138)
+.-|..||+.+..|. ++.+.|..+|..|++=|.
T Consensus 46 ~~yI~~L~~~~~~l~-------~~~~~l~~~~~~L~~~l~ 78 (83)
T d1nkpb_ 46 TEYIQYMRRKNHTHQ-------QDIDDLKRQNALLEQQVR 78 (83)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 344455555555544 445555555555555443
No 6
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.96 E-value=21 Score=21.85 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHH
Q psy5453 96 RVDSVKEENLRLRSENQVLGQYIEN 120 (138)
Q Consensus 96 RVd~VKeE~~KL~sENq~Lq~YI~N 120 (138)
-|...++++..|..+|..|+.-+..
T Consensus 51 yI~~L~~~~~~L~~e~~~lk~~~~~ 75 (80)
T d1am9a_ 51 YIRFLQHSNQKLKQENLSLRTAVHK 75 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444455555555555554443
No 7
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]}
Probab=48.13 E-value=24 Score=20.99 Aligned_cols=47 Identities=11% Similarity=0.278 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----HhHHHHHHHHhh
Q psy5453 77 ARLISQVLELQNTLDDLSQRVDSVKEENLRLRSEN----QVLGQYIENLMS 123 (138)
Q Consensus 77 e~Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sEN----q~Lq~YI~NLMs 123 (138)
+.+++.-..++..|...-.+|+.+......|...+ .-++.++.+|..
T Consensus 39 ~~l~~~h~~~~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~ 89 (107)
T d2spca_ 39 EALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVDEKRKQVLE 89 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 34677888888888888899999999998887776 446667766643
No 8
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.23 E-value=16 Score=21.52 Aligned_cols=13 Identities=31% Similarity=0.588 Sum_probs=5.8
Q ss_pred HHHHHHHHHhhhh
Q psy5453 99 SVKEENLRLRSEN 111 (138)
Q Consensus 99 ~VKeE~~KL~sEN 111 (138)
..++|+..|+.++
T Consensus 44 ~L~~e~~~L~~~~ 56 (61)
T d1uklc_ 44 KLRQENMVLKLAN 56 (61)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444444
No 9
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.57 E-value=20 Score=21.91 Aligned_cols=31 Identities=13% Similarity=0.149 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHhHHHHHHHH
Q psy5453 91 DDLSQRVDSVKEENLRLRSENQVLGQYIENL 121 (138)
Q Consensus 91 ~~L~~RVd~VKeE~~KL~sENq~Lq~YI~NL 121 (138)
..-++-|...++++..|..+.+.|+.=...|
T Consensus 43 ~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L 73 (83)
T d1nkpb_ 43 DKATEYIQYMRRKNHTHQQDIDDLKRQNALL 73 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344456666667777777777766654444
No 10
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.39 E-value=7.6 Score=24.35 Aligned_cols=42 Identities=5% Similarity=0.135 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHH
Q psy5453 77 ARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYI 118 (138)
Q Consensus 77 e~Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~Lq~YI 118 (138)
+.++++-..|+..|...-.+|..|.+.-.+|...+.+-..||
T Consensus 40 e~~l~~h~~~e~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i 81 (114)
T d1hcia4 40 EDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHT 81 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 567888899999999999999999999999987765444433
No 11
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=41.01 E-value=37 Score=21.46 Aligned_cols=30 Identities=27% Similarity=0.238 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhHhHHHHHHHH
Q psy5453 92 DLSQRVDSVKEENLRLRSENQVLGQYIENL 121 (138)
Q Consensus 92 ~L~~RVd~VKeE~~KL~sENq~Lq~YI~NL 121 (138)
.|..++.+++.+...|+.+=+-+..=+..+
T Consensus 68 ~l~~~~k~lk~~i~~le~~~~~~~~~l~~~ 97 (110)
T d1seta1 68 ALIARGKALGEEAKRLEEALREKEARLEAL 97 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555555554444444444444
No 12
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=39.37 E-value=28 Score=20.90 Aligned_cols=51 Identities=10% Similarity=0.154 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHh----HHHHHHHHh
Q psy5453 72 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQV----LGQYIENLM 122 (138)
Q Consensus 72 ~~eeKe~Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~----Lq~YI~NLM 122 (138)
+.+.=+.++++-..++..+...-.+|+.+.....+|-.++.+ +++++..|.
T Consensus 33 d~~~~~~~~~~h~~~~~ei~~~~~~i~~l~~~~~~L~~~~~~~~~~i~~~~~~l~ 87 (110)
T d1u5pa1 33 DLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETIN 87 (110)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 444556678888899999999999999999999999987754 445555544
No 13
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.29 E-value=43 Score=21.14 Aligned_cols=46 Identities=4% Similarity=-0.012 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHh
Q psy5453 77 ARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENLM 122 (138)
Q Consensus 77 e~Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~Lq~YI~NLM 122 (138)
+.++++...|+..|...-.+|..|.+....|...+......|..-+
T Consensus 88 ~~~~~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~i~~~l 133 (156)
T d1owaa_ 88 QGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHI 133 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHH
Confidence 3456777888899999999999999999999888877776665543
No 14
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=37.43 E-value=43 Score=21.35 Aligned_cols=29 Identities=24% Similarity=0.487 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5453 79 LISQVLELQNTLDDLSQRVDSVKEENLRL 107 (138)
Q Consensus 79 Li~eil~LQ~sL~~L~~RVd~VKeE~~KL 107 (138)
...+|...+..|..|-.-|+.++..|.+.
T Consensus 8 Ff~eV~~Ir~~I~~i~~~v~~i~~~~~~~ 36 (124)
T d1ez3a_ 8 FFEQVEEIRGFIDKIAENVEEVKRKHSAI 36 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555555555444
No 15
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.34 E-value=30 Score=22.75 Aligned_cols=22 Identities=14% Similarity=0.354 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHhhhhHhHHHHH
Q psy5453 97 VDSVKEENLRLRSENQVLGQYI 118 (138)
Q Consensus 97 Vd~VKeE~~KL~sENq~Lq~YI 118 (138)
+..+|.|.++|..+=+.|-++|
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li 24 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLM 24 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444433
No 16
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=29.44 E-value=41 Score=24.23 Aligned_cols=35 Identities=9% Similarity=0.080 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy5453 77 ARLISQVLELQNTLDDLSQRVDSVKEENLRLRSEN 111 (138)
Q Consensus 77 e~Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sEN 111 (138)
+.|.+++......|+.|.+.-.+.++-..+|+++.
T Consensus 227 ~~L~e~Ae~~e~~i~~l~e~~~e~~~~v~~LE~~y 261 (269)
T d2p90a1 227 LALERDAEKVHRQLMEQTEESSEIQRVVGALEQQY 261 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhH
Confidence 35778888888888888888888888888888774
No 17
>d1yf2a2 d.287.1.2 (A:221-425) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=28.48 E-value=54 Score=20.55 Aligned_cols=26 Identities=15% Similarity=0.188 Sum_probs=15.8
Q ss_pred HHHHHHHHHHhhhhHhHHHHHHHHhh
Q psy5453 98 DSVKEENLRLRSENQVLGQYIENLMS 123 (138)
Q Consensus 98 d~VKeE~~KL~sENq~Lq~YI~NLMs 123 (138)
+...+..+++++.++.|.++-..||.
T Consensus 169 ~~id~~i~~~~~~~~~l~~~k~~Ll~ 194 (205)
T d1yf2a2 169 SSVDKSIELKKQKKEKLQRMKKKIME 194 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344556666666677777777664
No 18
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.47 E-value=55 Score=19.39 Aligned_cols=51 Identities=16% Similarity=0.205 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHH
Q psy5453 71 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENL 121 (138)
Q Consensus 71 ~~~eeKe~Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~Lq~YI~NL 121 (138)
.+...=+.|+++-..|+..|..--.||..+...-++|..+|.+-.+-|...
T Consensus 30 ~dl~~v~~l~k~h~~l~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~ 80 (105)
T d1s35a2 30 DSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEK 80 (105)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCcchHHHHH
Confidence 344555678888999999999999999999999999998887666655543
No 19
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.42 E-value=56 Score=19.48 Aligned_cols=30 Identities=13% Similarity=0.148 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHH
Q psy5453 80 ISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQ 116 (138)
Q Consensus 80 i~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~Lq~ 116 (138)
+..|..||..+ .....+.++|..+++.|+.
T Consensus 46 ~~yI~~L~~~~-------~~l~~~~~~L~~~~~~L~~ 75 (79)
T d1nlwa_ 46 KLHIKKLEDSD-------RKAVHQIDQLQREQRHLKR 75 (79)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 34445555544 4555666666666666654
No 20
>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=26.36 E-value=25 Score=23.53 Aligned_cols=23 Identities=30% Similarity=0.400 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHH
Q psy5453 97 VDSVKEENLRLRSENQVLGQYIE 119 (138)
Q Consensus 97 Vd~VKeE~~KL~sENq~Lq~YI~ 119 (138)
+++...|..||+.||+.|.+-|.
T Consensus 4 ~EeLaaeL~rL~~ENk~LKkkl~ 26 (96)
T d2oa5a1 4 YEEMVKEVERLKLENKTLKQKVK 26 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 45667778888888888876654
No 21
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=25.96 E-value=59 Score=18.90 Aligned_cols=51 Identities=14% Similarity=0.246 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHh----HHHHHHHHh
Q psy5453 72 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQV----LGQYIENLM 122 (138)
Q Consensus 72 ~~eeKe~Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~----Lq~YI~NLM 122 (138)
+...=+.++++-..++..+...-.+|+.+....++|..++.. ++.++..|+
T Consensus 29 d~~~~~~ll~~h~~~~~~i~~~~~~~~~l~~~~~~l~~~~~~~~~~I~~~~~~l~ 83 (101)
T d1u5pa2 29 DLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFV 83 (101)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 445557788888999999999999999999999999887754 444555443
No 22
>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]}
Probab=25.80 E-value=26 Score=25.27 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHH
Q psy5453 79 LISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENL 121 (138)
Q Consensus 79 Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~Lq~YI~NL 121 (138)
.+++++.+...|..+-..+++..++.+.+...+..++..|+-+
T Consensus 211 ~i~~lk~~~k~L~~~~~~l~~~~~~l~~~~~~~~~v~~~i~Fi 253 (262)
T d2jf2a1 211 AITAIRNAYKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFF 253 (262)
T ss_dssp HHHHHHHHHHHHHTSCCCHHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHhhccCCHHHHHHHHHH
Confidence 3444444444444444566777777777777777777777744
No 23
>d1vf6a_ a.194.1.1 (A:) Associated tight junction protein Pals-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.70 E-value=40 Score=20.73 Aligned_cols=21 Identities=29% Similarity=0.578 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy5453 78 RLISQVLELQNTLDDLSQRVD 98 (138)
Q Consensus 78 ~Li~eil~LQ~sL~~L~~RVd 98 (138)
-|..+|+.||.+++.|-+.|.
T Consensus 34 PLF~qiL~lQ~SiqqLk~Qvn 54 (58)
T d1vf6a_ 34 PLFNQILTLQQSIKQLKGQLN 54 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 366788899999888766553
No 24
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.37 E-value=67 Score=19.32 Aligned_cols=28 Identities=21% Similarity=0.141 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5453 80 ISQVLELQNTLDDLSQRVDSVKEENLRL 107 (138)
Q Consensus 80 i~eil~LQ~sL~~L~~RVd~VKeE~~KL 107 (138)
+..|..||.....|...+..++.+..++
T Consensus 49 ~~yI~~L~~~~~~L~~e~~~lk~~~~~~ 76 (80)
T d1am9a_ 49 IDYIRFLQHSNQKLKQENLSLRTAVHKS 76 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555666666666555555555554443
No 25
>d2esha1 a.4.5.61 (A:4-117) Hypothetical protein TM0937 {Thermotoga maritima [TaxId: 2336]}
Probab=25.17 E-value=50 Score=21.09 Aligned_cols=34 Identities=15% Similarity=0.386 Sum_probs=28.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5453 70 PDEQEEKARLISQVLELQNTLDDLSQRVDSVKEE 103 (138)
Q Consensus 70 ~~~~eeKe~Li~eil~LQ~sL~~L~~RVd~VKeE 103 (138)
..+.+.-+++++++..+.+.++.|...++.+-+|
T Consensus 81 ~~G~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~e 114 (114)
T d2esha1 81 PQGKLYLREILRSLEDMKRRIETLEERIKRVLQE 114 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4678888888999999999999999998887654
No 26
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.62 E-value=71 Score=19.37 Aligned_cols=51 Identities=12% Similarity=0.111 Sum_probs=40.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHH
Q psy5453 71 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLRLRSENQVLGQYIENL 121 (138)
Q Consensus 71 ~~~eeKe~Li~eil~LQ~sL~~L~~RVd~VKeE~~KL~sENq~Lq~YI~NL 121 (138)
.+.+.=+.++++-..+...+...-.||+.+....++|-..+.+-...|...
T Consensus 45 ~d~~~v~~l~~~h~~~~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~ 95 (124)
T d1quua1 45 ASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDR 95 (124)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 455566678899999999999999999999999999988876655555433
No 27
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=23.74 E-value=6.1 Score=24.59 Aligned_cols=19 Identities=21% Similarity=0.300 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHhhhhHhH
Q psy5453 96 RVDSVKEENLRLRSENQVL 114 (138)
Q Consensus 96 RVd~VKeE~~KL~sENq~L 114 (138)
++..++.||+.|+.++.|+
T Consensus 67 ei~~L~~En~~Lk~~~~~~ 85 (89)
T d2jn6a1 67 QIRQLKKENALQRARTRHP 85 (89)
T ss_dssp HHHHHHHCGGGGGGTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4555666666666666654
No 28
>d1ydxa1 d.287.1.2 (A:1-193) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=23.17 E-value=75 Score=20.10 Aligned_cols=18 Identities=11% Similarity=0.071 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy5453 90 LDDLSQRVDSVKEENLRL 107 (138)
Q Consensus 90 L~~L~~RVd~VKeE~~KL 107 (138)
|+.|-.+|+..+.++++|
T Consensus 153 l~~ld~~i~~~~~~i~~l 170 (193)
T d1ydxa1 153 LSVFDERLENLASLIEIN 170 (193)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444455444444444
No 29
>d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]}
Probab=20.38 E-value=52 Score=22.47 Aligned_cols=26 Identities=15% Similarity=0.312 Sum_probs=19.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5453 71 DEQEEKARLISQVLELQNTLDDLSQR 96 (138)
Q Consensus 71 ~~~eeKe~Li~eil~LQ~sL~~L~~R 96 (138)
.....|+.|..|+..|.+.|..|.+.
T Consensus 48 ~~~~dr~ai~~E~~~l~~ei~~ia~~ 73 (395)
T d1io1a_ 48 NSQSDLDSIQAEITQRLNEIDRVSGQ 73 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45677888888888888887766654
Done!