Query psy5460
Match_columns 994
No_of_seqs 269 out of 321
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 18:09:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5460.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5460hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4igg_A Catenin alpha-1; asymme 100.0 8E-112 3E-116 1031.6 78.4 731 49-991 2-823 (832)
2 4igg_A Catenin alpha-1; asymme 100.0 4E-102 1E-106 946.5 51.2 460 1-468 314-773 (832)
3 1tr2_A Vinculin isoform 1; act 100.0 3.3E-76 1.1E-80 745.2 74.5 782 22-897 40-1051(1066)
4 1tr2_A Vinculin isoform 1; act 100.0 1.1E-67 3.8E-72 667.5 39.2 440 1-464 600-1055(1066)
5 1h6g_A Alpha-1 catenin; adhesi 100.0 3.6E-49 1.2E-53 426.5 32.7 238 1-238 19-256 (256)
6 1qkr_A Vinculin, tail domain; 100.0 2.5E-49 8.4E-54 402.3 14.1 154 710-897 20-173 (188)
7 3vf0_A Vinculin, metavinculin; 100.0 2.5E-47 8.4E-52 403.1 14.8 156 709-898 114-269 (283)
8 1h6g_A Alpha-1 catenin; adhesi 100.0 2.2E-40 7.6E-45 357.9 26.5 206 462-687 1-206 (256)
9 3vf0_A Vinculin, metavinculin; 100.0 2.5E-41 8.4E-46 357.4 15.9 153 307-464 117-272 (283)
10 1qkr_A Vinculin, tail domain; 100.0 5E-41 1.7E-45 341.4 15.1 163 291-464 13-177 (188)
11 2l7a_A Talin-1; vinculin, bund 99.0 9.1E-10 3.1E-14 106.6 10.3 91 137-232 35-125 (131)
12 1dow_A Alpha-catenin; four-hel 98.2 0.00012 4.1E-09 76.3 21.3 177 361-572 7-186 (205)
13 3dyj_A Talin-1; helix bundles, 98.0 0.0034 1.2E-07 69.3 28.9 210 16-232 77-323 (332)
14 3rf3_A Vinculin, metavinculin; 98.0 0.00033 1.1E-08 75.5 20.3 186 354-573 38-232 (258)
15 3rf3_A Vinculin, metavinculin; 97.7 0.019 6.5E-07 61.9 27.3 209 20-238 38-251 (258)
16 3dyj_A Talin-1; helix bundles, 97.3 0.29 9.9E-06 54.1 31.9 310 51-451 12-327 (332)
17 2x0c_A Talin-1; cytoskeleton, 97.3 0.028 9.5E-07 62.1 22.6 203 7-236 57-302 (309)
18 1sj8_A Talin 1; structural pro 97.1 0.076 2.6E-06 58.0 22.9 124 727-891 152-277 (308)
19 2l7a_A Talin-1; vinculin, bund 96.8 0.015 5.1E-07 56.4 13.1 90 16-112 36-125 (131)
20 1dow_A Alpha-catenin; four-hel 96.7 0.76 2.6E-05 47.8 26.9 193 27-235 7-203 (205)
21 1sj8_A Talin 1; structural pro 96.6 0.41 1.4E-05 52.3 24.3 123 322-455 152-278 (308)
22 2x0c_A Talin-1; cytoskeleton, 96.5 0.1 3.6E-06 57.5 18.8 212 325-572 45-284 (309)
23 1u89_A Talin 1, talin; 4-helix 96.0 0.035 1.2E-06 54.2 10.7 70 138-212 66-135 (139)
24 3fyq_A CG6831-PA (talin); 5-he 94.2 1.4 4.9E-05 45.2 16.2 84 16-102 68-153 (199)
25 2l10_A Talin-1; helical bundle 92.5 1.6 5.6E-05 43.5 13.3 109 330-451 47-155 (158)
26 4f7g_B Talin-1; alpha-helix bu 91.9 3.9 0.00013 42.8 15.9 172 35-236 9-184 (216)
27 1u89_A Talin 1, talin; 4-helix 90.7 0.89 3.1E-05 44.3 9.0 69 17-85 67-135 (139)
28 2l7n_A Talin-1; integrin, bund 90.6 1.8 6.1E-05 43.6 11.3 96 7-102 63-158 (168)
29 2b0h_A Talin-1; vinculin, heli 90.2 4.5 0.00015 39.4 13.4 93 16-108 40-132 (137)
30 2kvp_A Talin-1; VBS, vinculin, 89.6 4.3 0.00015 40.7 13.2 92 17-108 69-160 (165)
31 3fyq_A CG6831-PA (talin); 5-he 89.3 9.5 0.00032 39.2 15.5 76 488-564 60-137 (199)
32 2l10_A Talin-1; helical bundle 89.1 11 0.00037 37.6 15.5 90 16-112 62-151 (158)
33 2jsw_A Talin-1; C-terminal act 84.1 6.2 0.00021 40.4 11.0 59 758-820 97-156 (189)
34 2jsw_A Talin-1; C-terminal act 83.1 5.1 0.00017 41.0 9.8 88 352-452 96-183 (189)
35 2b0h_A Talin-1; vinculin, heli 78.4 39 0.0013 32.8 13.8 95 137-236 39-133 (137)
36 2kvp_A Talin-1; VBS, vinculin, 78.2 48 0.0016 33.2 14.8 94 138-236 68-161 (165)
37 4f7g_B Talin-1; alpha-helix bu 78.0 21 0.0007 37.3 12.5 95 16-117 90-185 (216)
38 1r0d_A HIP1-related, huntingti 76.5 19 0.00067 37.2 11.7 109 326-453 83-191 (206)
39 2l7n_A Talin-1; integrin, bund 75.8 19 0.00064 36.2 11.1 84 488-571 63-146 (168)
40 1syq_B Talin 1; cytoskeleton, 64.4 4.7 0.00016 27.2 2.5 24 869-892 2-25 (26)
41 1r0d_A HIP1-related, huntingti 64.2 47 0.0016 34.3 11.3 61 758-821 104-164 (206)
42 3t6g_B Breast cancer anti-estr 61.7 1.5E+02 0.0053 30.9 14.5 98 134-236 124-222 (229)
43 3t6g_B Breast cancer anti-estr 58.6 1.7E+02 0.0059 30.5 14.2 103 9-112 121-225 (229)
44 1t01_B Talin 1; five helix bun 51.2 15 0.0005 24.8 3.1 21 868-888 3-23 (26)
45 3dwc_A TCMCP-1, metallocarboxy 36.9 5.7E+02 0.019 29.8 17.5 103 83-195 77-188 (505)
46 1u6h_B Talin; protein-protein 36.4 22 0.00075 25.9 2.4 25 867-891 6-30 (31)
47 3hq2_A Bacillus subtilis M32 c 35.3 5.1E+02 0.017 30.2 15.1 102 83-194 78-186 (501)
48 2olt_A Hypothetical protein; s 28.9 4.6E+02 0.016 26.4 14.7 59 26-84 16-83 (227)
49 3ajm_A Programmed cell death p 23.9 3.4E+02 0.012 28.1 9.6 86 350-445 114-203 (213)
50 3hoa_A Thermostable carboxypep 23.3 7.7E+02 0.026 28.7 13.8 98 83-194 80-197 (509)
51 2yfa_A MCPS, methyl-accepting 21.0 6.5E+02 0.022 25.3 21.5 137 45-186 42-184 (258)
No 1
>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}
Probab=100.00 E-value=7.9e-112 Score=1031.57 Aligned_cols=731 Identities=47% Similarity=0.654 Sum_probs=556.1
Q ss_pred ChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHHHHHHH
Q psy5460 49 NEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSENHILED 128 (994)
Q Consensus 49 d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~~I~~d 128 (994)
|+.+...+-.|...++.=+.-+..++..|..+|.|...++.|=.=-+.--..|.+|.-+.|.+. +.- |...
T Consensus 2 ~~~Lk~eM~~A~~~v~~ag~~l~~aa~~l~~DP~s~~~R~~lV~aAR~LLs~vTrLLllaD~~~-Vrk--------Ii~~ 72 (832)
T 4igg_A 2 SQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMAD-VYK--------LLVQ 72 (832)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--------HHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--------HHHH
Confidence 5666777888888999999999999999999999999999887777777778888887777654 333 3333
Q ss_pred HHHHHH---HHhc-CChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHh
Q psy5460 129 VNKCVL---ALQE-GDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKVLREQVMPNFATRVEVAVDAL 204 (994)
Q Consensus 129 ~~~c~~---Ai~~-~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l 204 (994)
.++|.. .+.. .+.+.|+..-..+-.....+...+.+--.---||.+|+.+..+-..|+..+ ||+.-+.+.++
T Consensus 73 ~~~Vl~~L~~le~v~s~~eLv~~f~~f~~~m~eL~~lt~~Rq~dLk~~~~R~~L~aAr~~Lk~~s-pmLlta~Kt~l--- 148 (832)
T 4igg_A 73 LKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNV-PILYTASQACL--- 148 (832)
T ss_dssp HHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc---
Confidence 333333 3333 355888888888888877777777666666688999999999999998655 88775655554
Q ss_pred hcCCCCchhhhHHHHhHHHHHHHHHHHHHHHhccCCCCCCCCCCccccccccccccccCCCCccCCCCCCCCccCCCchh
Q psy5460 205 STTPPKEVDENEFIDASRLVYDGVREIRRAVLMNRTDEELDPEDIELDDQYTTSEAATMPRSKELGVDEYPDISGITTAR 284 (994)
Q Consensus 205 ~~np~~~~~~~~f~da~~~l~~~V~~vr~av~~~~~p~el~~~~s~~~~~~~~~~a~~~~~~s~~~~~~~~~~~~~~~~~ 284 (994)
.+|..+.+..+=......+.+++..|-.++.... |++-. +++ . ..|.
T Consensus 149 -rhp~~~~A~~nRd~v~~qm~~al~~Ii~vlq~~~-~~e~~---~~~---------------~---------~~g~---- 195 (832)
T 4igg_A 149 -QHPDVAAYKANRDLIYKQLQQAVTGISNAAQATA-SDDAS---QHQ---------------G---------GGGG---- 195 (832)
T ss_dssp -HSTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCS-CSTTT---TCC---------------S---------SCSC----
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCccc---ccc---------------c---------chHH----
Confidence 5788877777666778889999999988774322 22100 000 0 0000
Q ss_pred HHhhcCChHHHHHHHHHHHHHHhhhhhhHHHhhhhccCCchHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Q psy5460 285 EAMRKMTEEDKQKIAQQVEFFRSEKLKFDREVAKWDDTGNDIIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKIS 364 (994)
Q Consensus 285 ~~~~~lp~~e~~ki~~~~~~~~~~a~~l~~E~~kW~~~~N~IV~~Ak~Ma~~m~~M~~ftrg~G~l~tk~dli~~Ak~ia 364 (994)
.+......| +.- | .|.-.+-+++ .....|-...+
T Consensus 196 ------------~l~~al~~~-------~~~----------i------------~~~p~~~~e~--~~r~~L~~~Le--- 229 (832)
T 4igg_A 196 ------------ELAYALNNF-------DKQ----------I------------IVDPLSFSEE--RFRPSLEERLE--- 229 (832)
T ss_dssp ------------HHHHHHHHH-------HHH----------H------------HSCCCSSCCS--SHHHHHHHHHH---
T ss_pred ------------HHHHHHHHH-------HHH----------H------------hcCccccccc--hhhHHHHHHHH---
Confidence 111111112 110 1 0100011111 12223333323
Q ss_pred HhhhhHHHHHHHHhh-hCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccccccccccchhccCCchHHHHHHHHHHHHHH
Q psy5460 365 EAGTNLDKLTRQIAD-QCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAV 443 (994)
Q Consensus 365 e~~~~l~~lar~iA~-~c~D~~~k~~LL~~~e~I~~~~~QL~i~s~vKa~~~~~g~e~~~s~~~~~~~lI~~AknLm~~V 443 (994)
.+..-+..|++ .|+.+..|..|+.+|+++...-++| ++ .-+.+.|. + +..+.+-....+|.
T Consensus 230 ----~iv~~a~~~aDs~~t~~~~Re~Iv~~C~~vrq~L~dL--l~---~~~~~~g~-----~-~~s~~l~~ai~~l~--- 291 (832)
T 4igg_A 230 ----SIISGAALMADSSCTRDDRRERIVAECNAVRQALQDL--LS---EYMGNAGR-----K-ERSDALNSAIDKMT--- 291 (832)
T ss_dssp ----HHHHHHHHHHSSTTSCHHHHHHHHHHHHHHHHHHHHH--HH---HHHTCSSC-----S-CCHHHHHHHHHHHH---
T ss_pred ----HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH--HH---HHhhcccc-----c-cCChHHHHHHHHHH---
Confidence 33444556787 5998888999999999998766655 22 11222231 0 12223333333333
Q ss_pred HHHHHHHHHHhccccchhhhhhhhhHHHHhhhhhcccccccchhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5460 444 VLTVKSSYVASTKYPRQNQVAKKSHTAIVDRILLVFSFMETDIPILVLIEAARSGNEKEVEKAAENFADHANKLVEVANL 523 (994)
Q Consensus 444 ~~tv~~~~~as~K~~~~~~l~~~~~~avv~~v~~~dsF~dt~~PL~~L~~Aa~~Gd~e~~~~~a~~F~eha~~l~evA~l 523 (994)
++..+|++.+++|+++||+ |+|+|+++||+.|++|++.||+++|++|++.|++|++||++||+|
T Consensus 292 --------------~k~~dL~r~L~~Avvdqvs--D~F~dt~~pL~~Li~Aa~~g~ee~~~e~a~~F~eha~~lvevA~L 355 (832)
T 4igg_A 292 --------------KKTRDLRRQLRKAVMDHVS--DSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANL 355 (832)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHH--HHTSSSSHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHHHHHHHHHH--HHHHhcCchHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999 669999999999999999999999999999999999999999999
Q ss_pred HhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHhhhhHHHHHhhhhhhHHHhhhhHHHHHHHHHHHHHH
Q psy5460 524 ACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKEAWDSQSQVAQENMDVFKEAWDSQVRVL 603 (994)
Q Consensus 524 v~~~s~ne~~~~~i~~aa~~le~L~PQVI~Aar~l~~~P~sk~A~en~e~~~~~w~~~~~~~~e~~~~~k~~W~~~v~~L 603 (994)
+|++|+|+++++.++.++++++.|+||||+||++|+.||+||+|+||||+||+ +|.++|++|
T Consensus 356 v~~~s~ne~~v~~i~~aa~~le~L~PQVI~Aar~L~~~P~Sk~A~Enle~f~~------------------~W~~~v~~L 417 (832)
T 4igg_A 356 ACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKE------------------QWEKQVRVL 417 (832)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH------------------HHHHHHHHH
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHH------------------HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998665 688999999
Q ss_pred HHhhhhhcChHHHHHhhHHHHHHHHHHHHHHHhcCChhhhhhhhhHHhhhhhHHHHHHHHhhhcCCCCcchHHHHHHHHH
Q psy5460 604 TEAVDDITTIDDFLAVSENHILEDVNKCVLALQEGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKV 683 (994)
Q Consensus 604 ~~~vDdit~~~dFl~vse~~i~~d~~~c~~Ai~~~~~~~l~~~a~~I~~ra~RV~~va~~e~~n~edp~~~~~v~~av~~ 683 (994)
+++||+|+|++|||+|||++|++|+++|++||++++|++|++++++|+||++|||+|+++||+|||||+|+++|+++++.
T Consensus 418 ~~avDdi~di~dFL~vSe~~i~~dv~~c~~Al~~~~~~~~~~~A~~I~gRa~rV~~V~~~Emdn~edp~y~~~V~~av~~ 497 (832)
T 4igg_A 418 TDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKL 497 (832)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCSSHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHH--------------------------------------------------------------------------
Q psy5460 684 LREQGM-------------------------------------------------------------------------- 689 (994)
Q Consensus 684 l~~~~~-------------------------------------------------------------------------- 689 (994)
|+++++
T Consensus 498 L~~~v~P~~~~~~~~a~~~~a~~p~~~~~~~~f~das~~l~~~V~~VR~Av~~~~~p~el~~~~~~~e~~~~~s~~~~~~ 577 (832)
T 4igg_A 498 LSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQT 577 (832)
T ss_dssp HHHTHHHHHHHHHHHHHHHHTTSSSCCSCHHHHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHccCCCchhhcccccchhhcccccCCCCCC
Confidence 874310
Q ss_pred ------------HHhhcCCHHHHHHHHHhhhhhhhhhhhhHHHhhhhcCCCchHHHHHHHHHHHHHHHHHhhccCCCCCC
Q psy5460 690 ------------EAMRKMTEEDKQKIAQQVEFFRSEKLKFDREVAKWDDTGNDIIVLAKHMCMIMMEMTDFTRGRGPLKT 757 (994)
Q Consensus 690 ------------ea~~~l~~e~k~kIa~~~~~~~~~~~~l~~E~~kWd~~~NdIv~~ak~Ma~~m~~m~~ftrg~g~lkt 757 (994)
+.++++|+++|++|++++..|+..+++||+|++|||+++||||++||+||.|||+||+||||+|||||
T Consensus 578 ~~~~~~~~~~~~~~~~~~p~eek~ki~~~~~~~~~~~~~l~~E~~kWd~~~n~iv~~ak~m~~~m~~m~~~~rg~g~lk~ 657 (832)
T 4igg_A 578 EDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKN 657 (832)
T ss_dssp -------CCSHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCSSSHHHHHHHHHHHHHHHHHHHTTTCSSCCS
T ss_pred CCCCCCCCcchhhcccCCCchhhhHHHHHHHHHHHHHhhHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 11347889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHhccCCCcchHHHHHHHHHhhhhhhhHhhhhhhccccccCCchhhHHHHHHHHHHH
Q psy5460 758 TMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQKPTNKDLLAYLQRIALY 837 (994)
Q Consensus 758 t~dli~~Ak~iae~~~~l~~~a~~~a~~c~D~~~k~~Ll~~~e~i~t~~~QLki~s~vka~~~~~~~~~~~~~~~~~~~~ 837 (994)
|+|||++||+||++|+++++++|+||++|||+++|++||+||++||||||||||+++|||++++.
T Consensus 658 ~~dli~~Ak~ia~~~~~~~~~~~~~a~~c~d~~~k~~ll~~~~~i~~~~~QL~i~~~vka~~~~~--------------- 722 (832)
T 4igg_A 658 TSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNL--------------- 722 (832)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSS---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhHHHHHHHHHHhccccccCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999999887654
Q ss_pred hhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhhhhHHHHHHHhhhH
Q psy5460 838 CHQLNITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKSSYVASTKYPRQNQVALDSATSLIQAAKNLMN 917 (994)
Q Consensus 838 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~a~nlm~~v~~~v~~~~~as~k~~~~~~~~~~~~~~~~~~~~~~~~ 917 (994)
++++++|+.+++++||+||||||++|++||++||+|||||.++.+.
T Consensus 723 -----------------~~~~~~s~~d~~~~li~~aknlm~~v~~~v~~~~~as~k~~~~~~~----------------- 768 (832)
T 4igg_A 723 -----------------GGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGM----------------- 768 (832)
T ss_dssp -----------------CCSSCEEHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHTC-----------------
T ss_pred -----------------CccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc-----------------
Confidence 7889999999999999999999999999999999999999996331
Q ss_pred HHHHHhhccccccccCCCCCCCCcceeEeeccCCCCCCCCCCCChhHHHHHhhhccccccCChhhhhhhccCCC
Q psy5460 918 AVVLTVKSSYVASTKYPRQNQVASPIVVWKMKAPEKKPLVRPEKPEEVRAKVRKGSQKKVQNPIKALSEFQSPT 991 (994)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (994)
.++++|+|.||||+|||||||++++|++++++|||||+|+|+||+|+||||++++
T Consensus 769 -------------------~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (832)
T 4igg_A 769 -------------------ASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMD 823 (832)
T ss_dssp -------------------SSCCCCCCCCCC-------------------------------------------
T ss_pred -------------------cccccchhhccCCCccccccccccCchhhcchhcccccccCCCHHHHHHHhhccC
Confidence 2357999999999999999999999999999999999999999999999999965
No 2
>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}
Probab=100.00 E-value=3.8e-102 Score=946.52 Aligned_cols=460 Identities=68% Similarity=1.003 Sum_probs=420.7
Q ss_pred CccchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhC
Q psy5460 1 METDIPILVLIEAARSGNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAAR 80 (994)
Q Consensus 1 ldt~~PL~~L~eAa~~G~ee~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~ 80 (994)
+||++||+.|++|++.||+++|++|++.|++|++||++||+|+|++|+|+++++.|+.+++||+.|+||||+||++|+.|
T Consensus 314 ~dt~~pL~~Li~Aa~~g~ee~~~e~a~~F~eha~~lvevA~Lv~~~s~ne~~v~~i~~aa~~le~L~PQVI~Aar~L~~~ 393 (832)
T 4igg_A 314 LETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAK 393 (832)
T ss_dssp SSSSHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhcCchHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHHHHHHHHHHHHHHHhcCChhHHHhHHHHHHHHHhHHHH
Q psy5460 81 PRSKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSENHILEDVNKCVLALQEGDADILDRTAGAIRGRSARVAN 160 (994)
Q Consensus 81 P~sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~~I~~d~~~c~~Ai~~~d~~~~~~~a~~I~gra~RV~~ 160 (994)
|+||+|+|||++||++|+++|++|+++||+|+|++|||+|||+||.+|+++|++||++++|++|+++||+|+||++|||+
T Consensus 394 P~Sk~A~Enle~f~~~W~~~v~~L~~avDdi~di~dFL~vSe~~i~~dv~~c~~Al~~~~~~~~~~~A~~I~gRa~rV~~ 473 (832)
T 4igg_A 394 PQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIH 473 (832)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhhcCCCCchhhhHHHHhHHHHHHHHHHHHHHHhccCC
Q psy5460 161 VVAAEMDNYEPGIYTERVLEAIKVLREQVMPNFATRVEVAVDALSTTPPKEVDENEFIDASRLVYDGVREIRRAVLMNRT 240 (994)
Q Consensus 161 Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~~np~~~~~~~~f~da~~~l~~~V~~vr~av~~~~~ 240 (994)
|+++||||||||+|+++|++++++|+++++|+|.+++++|+++++.||.++.+.++|+++++.|+++|++||+||+|+++
T Consensus 474 V~~~Emdn~edp~y~~~V~~av~~L~~~v~P~~~~~~~~a~~~~a~~p~~~~~~~~f~das~~l~~~V~~VR~Av~~~~~ 553 (832)
T 4igg_A 474 VVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRT 553 (832)
T ss_dssp HHHHHTTTSCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSSSCCSCHHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccccccccccccCCCCccCCCCCCCCccCCCchhHHhhcCChHHHHHHHHHHHHHHhhhhhhHHHhhhhc
Q psy5460 241 DEELDPEDIELDDQYTTSEAATMPRSKELGVDEYPDISGITTAREAMRKMTEEDKQKIAQQVEFFRSEKLKFDREVAKWD 320 (994)
Q Consensus 241 p~el~~~~s~~~~~~~~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~lp~~e~~ki~~~~~~~~~~a~~l~~E~~kW~ 320 (994)
|++++ +++++. +.++ .++++| .|+++.++..| .+++++|++||++|++||++++..|+.++++||+|++|||
T Consensus 554 p~el~--~~~~~~-e~~~---~~s~~~-~~~~~~~~~~~-~~~~~~~~~~p~eek~ki~~~~~~~~~~~~~l~~E~~kWd 625 (832)
T 4igg_A 554 PEELD--DSDFET-EDFD---VRSRTS-VQTEDDQLIAG-QSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWD 625 (832)
T ss_dssp C-------------------------------------C-CSHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred chhhc--ccccch-hhcc---cccCCC-CCCCCCCCCCC-cchhhcccCCCchhhhHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 99886 444432 2332 223333 33333333333 5678899999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHhhhhHHHHHHHHhhhCCCchhHHHHHHHHHHHHHH
Q psy5460 321 DTGNDIIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALY 400 (994)
Q Consensus 321 ~~~N~IV~~Ak~Ma~~m~~M~~ftrg~G~l~tk~dli~~Ak~iae~~~~l~~lar~iA~~c~D~~~k~~LL~~~e~I~~~ 400 (994)
+++||||++||+||.+|++||+|+||+||||||+|||++||+||++|+++++++|+||++|||+++|++||+||++||+|
T Consensus 626 ~~~n~iv~~ak~m~~~m~~m~~~~rg~g~lk~~~dli~~Ak~ia~~~~~~~~~~~~~a~~c~d~~~k~~ll~~~~~i~~~ 705 (832)
T 4igg_A 626 DSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALY 705 (832)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHTTTCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHSTTTSCTTHHHHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhcccccccccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhh
Q psy5460 401 CHQLNITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKSSYVASTKYPRQNQVAKKSH 468 (994)
Q Consensus 401 ~~QL~i~s~vKa~~~~~g~e~~~s~~~~~~~lI~~AknLm~~V~~tv~~~~~as~K~~~~~~l~~~~~ 468 (994)
||||+||++||+++++.|++++|++++++++||++|||||++|++||++||+||+||++.++......
T Consensus 706 ~~QL~i~~~vka~~~~~~~~~~~s~~d~~~~li~~aknlm~~v~~~v~~~~~as~k~~~~~~~~~~~~ 773 (832)
T 4igg_A 706 CHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNL 773 (832)
T ss_dssp HHHHHHHHHTTTTSSSSCCSSCEEHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHTCSSCCC
T ss_pred HHHHHHHHhccccccCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999766664333
No 3
>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A
Probab=100.00 E-value=3.3e-76 Score=745.23 Aligned_cols=782 Identities=21% Similarity=0.263 Sum_probs=567.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Q psy5460 22 VEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKEAWDSQV 101 (994)
Q Consensus 22 ~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~~W~~~v 101 (994)
+..-++.|..-.+.|+.+++-++..+.|+.....+-.++.+++.-+-+++.+++.+..+|.|..+++.|-.--+.-.+.|
T Consensus 40 l~~~~~aV~~A~~~LV~~g~~~A~~~~D~~lk~~m~~A~~~v~~a~s~L~~aak~l~~dp~s~~~r~~Li~aAR~vl~sv 119 (1066)
T 1tr2_A 40 LTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGT 119 (1066)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHCTTCTTTTTTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHH
Confidence 44468889999999999999999999999999999999999999999999999999999999999999977777777788
Q ss_pred HHHHHHHhhhcChHHHHHHhHHHHHHHHHHHHHHH----hcCChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccchHH
Q psy5460 102 RVLTEAVDDITTIDDFLAVSENHILEDVNKCVLAL----QEGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTER 177 (994)
Q Consensus 102 ~~L~~avDditd~~dFL~vSe~~I~~d~~~c~~Ai----~~~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~ 177 (994)
.+|..++|++. +. .|....+.+..+| .-++++.|...+..+..-...+.+.++...+-..|+.|++.
T Consensus 120 ~~LL~~~D~a~-v~--------kl~~a~~~v~~~L~~~~~~~~~~elv~~~k~l~~~m~~l~~~~~~r~~~l~d~~~r~~ 190 (1066)
T 1tr2_A 120 SDLLLTFDEAE-VR--------KIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVM 190 (1066)
T ss_dssp HHHHHHHHHHH-HH--------HHHHHHHHHHHHHHHGGGCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTBSCHHHHHH
T ss_pred HHHHHHhhHHH-HH--------HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 88888888775 22 3333333333332 23677999999999998888999999987766789999999
Q ss_pred HHHHHHHHHHhhchhhHhHHHHHHHHhh-cCCCCchhhhHHHHhHHHHHHHHHHHHHHHhccCCCCCCCCCCcc---ccc
Q psy5460 178 VLEAIKVLREQVMPNFATRVEVAVDALS-TTPPKEVDENEFIDASRLVYDGVREIRRAVLMNRTDEELDPEDIE---LDD 253 (994)
Q Consensus 178 V~~a~~~L~~~i~p~v~~av~~a~~~l~-~np~~~~~~~~f~da~~~l~~~V~~vr~av~~~~~p~el~~~~s~---~~~ 253 (994)
+..+.+.|.+.+ |++..+...++..-. ..|..+.+..+.......+.+++.+|..++.....|+ ....... +..
T Consensus 191 L~~A~~~L~~~~-~~L~~a~k~~~~~~~~~~~~~~~A~~~r~~~~~~~~~a~~~Ii~a~q~~~~~~-~~~~~~~~~~l~~ 268 (1066)
T 1tr2_A 191 LVNSMNTVKELL-PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDE-DAWASKDTEAMKR 268 (1066)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCS-SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-HHHHHHHHHHHcCCCCCCcccHHHHHhhhHHHHHHHHHHHHHHHHHhcCCCCc-cccchhhHHHHHH
Confidence 999999998766 666655666553111 1355555555556666777888888877775332221 1000000 000
Q ss_pred -cccccccccCCCCccCCCCCCCCccCCCchhHHhhcCC--hHHHHHHHHHHHHHHhhhhhhHHHhhhhccCCchHHHHH
Q psy5460 254 -QYTTSEAATMPRSKELGVDEYPDISGITTAREAMRKMT--EEDKQKIAQQVEFFRSEKLKFDREVAKWDDTGNDIIVLA 330 (994)
Q Consensus 254 -~~~~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~lp--~~e~~ki~~~~~~~~~~a~~l~~E~~kW~~~~N~IV~~A 330 (994)
...+...-+..... +.++. ..| ..++ -+...+...+..+..+ . ......+..+.
T Consensus 269 ~~~~~~~~~~~a~~~---------~~~p~-------a~p~~~~~~-a~r~~i~~a~~~a~~~----~--p~~~~~~~~l~ 325 (1066)
T 1tr2_A 269 ALASIDSKLNQAKGW---------LRDPS-------ASPGDAGEQ-AIRQILDEAGKVGELC----A--GKERREILGTC 325 (1066)
T ss_dssp HHHHHHTTHHHHHHH---------HSCSS-------CCTTSHHHH-HHHHHHHHHHHHHTTS----C--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---------hcCCc-------cCCcchhHH-HHHHHHHHHHHHHHhc----C--cccHHHHHHHH
Confidence 00000000000000 00000 001 1111 0111111111111000 0 01122344444
Q ss_pred HHHHHHHHHHHHHhc-cCCCCC-----------------------------------CHHHHHHHHHH----------HH
Q psy5460 331 KHMCMIMMEMTDFTR-GRGPLK-----------------------------------TTMDVINAAKK----------IS 364 (994)
Q Consensus 331 k~Ma~~m~~M~~ftr-g~G~l~-----------------------------------tk~dli~~Ak~----------ia 364 (994)
+....+...+.+|.+ |.|+.. +-..||.+|+. ++
T Consensus 326 ~~l~~~~~~L~~Lr~~g~G~~~~a~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~~~~~~aqli~aA~~~~~~P~~~~~~a 405 (1066)
T 1tr2_A 326 KMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGE 405 (1066)
T ss_dssp HHHHHHHHHHHHHTTTTGGGSHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCCHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhccCCCcchHHH
Confidence 444444455555542 333211 01111111111 23
Q ss_pred HhhhhHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccccccccccchhcc--------CCc--------
Q psy5460 365 EAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSG--------LDS-------- 428 (994)
Q Consensus 365 e~~~~l~~lar~iA~~c~D~~~k~~LL~~~e~I~~~~~QL~i~s~vKa~~~~~g~e~~~s~--------~~~-------- 428 (994)
.....++.-.|.++..|+|+..+.+||..|+.|..++.||.-.++. +.|.+-.+.. +..
T Consensus 406 ~alk~l~~~~r~~a~~~~~~~~~~~il~~~~~i~~~s~~l~~~~~~-----~~~~~~~~~~~~~~v~~al~~l~~~ld~a 480 (1066)
T 1tr2_A 406 EQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQ-----GKGDSPEARALAKQVATALQNLQTKTNRA 480 (1066)
T ss_dssp HHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHTTTS-----CCCTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCchhHHHHHHHHHHHHHHHHHHHHHHhh-----ccCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666678888999999999999999999999999988654421 1110000000 000
Q ss_pred ---------------------------------------------------------hHHHHHHHHHHHHHHHHHHHHH-
Q psy5460 429 ---------------------------------------------------------ATSLIQAAKNLMNAVVLTVKSS- 450 (994)
Q Consensus 429 ---------------------------------------------------------~~~lI~~AknLm~~V~~tv~~~- 450 (994)
-..++...+++.....+++..+
T Consensus 481 i~~~~~~~~~~~~~~~~~qa~~~l~~p~~~~~~~~~~a~~~l~~~~~~la~~~~~~~r~~~l~~~k~v~~~s~qLl~~a~ 560 (1066)
T 1tr2_A 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVDQLTAQLADLAA 560 (1066)
T ss_dssp HHTTSCCCCCSSHHHHHHHHHHHHHCTTSCCCSHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccccccccchHHHHHHHhcCccchhhhhhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112222222222222222110
Q ss_pred ----------HHHhccccchhhhhhhhhHHHHhhhhhcccccccchhHHHHHHHHhc-----CCHHHHHHHHHHHHHHHH
Q psy5460 451 ----------YVASTKYPRQNQVAKKSHTAIVDRILLVFSFMETDIPILVLIEAARS-----GNEKEVEKAAENFADHAN 515 (994)
Q Consensus 451 ----------~~as~K~~~~~~l~~~~~~avv~~v~~~dsF~dt~~PL~~L~~Aa~~-----Gd~e~~~~~a~~F~eha~ 515 (994)
..+..-.....++.+.+.++++++|+ |+|.|+++||+.|++++.. ||.+.|.++++.|++|++
T Consensus 561 ~~~~~~P~a~~~~~~L~~a~~~L~~~i~~~a~~~i~--d~f~d~~~~l~~L~eaa~~~~~~~~~~~~~~~~a~~~~~~~~ 638 (1066)
T 1tr2_A 561 RGEGESPQARALASQLQDSLKDLKARMQEAMTQEVS--DVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSG 638 (1066)
T ss_dssp HSCSSCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHH--HHTTCCSHHHHHHHHHHHSCTTCTTTTTHHHHHHHHHHHHHH
T ss_pred hhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHhhhhhHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHH
Confidence 01111123467788889999999998 6799999999999999984 999999999999999999
Q ss_pred HHHHHHHHHhccCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHhhhhHHHHHhhhhhhHHHhhhhHHHHH
Q psy5460 516 KLVEVANLACSMSN-NEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKEAWDSQSQVAQENMDVFKE 594 (994)
Q Consensus 516 ~l~evA~lv~~~s~-ne~~~~~i~~aa~~le~L~PQVI~Aar~l~~~P~sk~A~en~e~~~~~w~~~~~~~~e~~~~~k~ 594 (994)
+|+++|++++++++ |++.++.++.++.+|+.++||+|++|++++.||+|+.|++||+.|+ +
T Consensus 639 ~L~~~a~~~~~~~~~~~~~~~~i~~aa~~l~~~t~~lv~aar~~~~~p~n~~Ak~~l~~~~------------------~ 700 (1066)
T 1tr2_A 639 KLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMK------------------N 700 (1066)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCTHHHHHHHHHH------------------H
T ss_pred HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCCCHHHHHHHHHHH------------------H
Confidence 99999999999999 9999999999999999999999999999999999999999999755 4
Q ss_pred HHHHHHHHHHHhhhhhcChHHHHHhhHHHHHHHHHHHHHHHhcCChhhhhhhhhHHhhhhhHHHHHHHHhhhcCCCCcch
Q psy5460 595 AWDSQVRVLTEAVDDITTIDDFLAVSENHILEDVNKCVLALQEGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYT 674 (994)
Q Consensus 595 ~W~~~v~~L~~~vDdit~~~dFl~vse~~i~~d~~~c~~Ai~~~~~~~l~~~a~~I~~ra~RV~~va~~e~~n~edp~~~ 674 (994)
.|.+++..|+++||+|+|+++|+++++++|.+|+..|+.+++.+++++++..+++|+++++|+++++++++++++||.|.
T Consensus 701 ~~~~~v~~L~~~V~~i~dl~~f~aas~~~i~ed~~~~~~a~~~~~~~~l~~~a~~i~~~~~~l~~vv~~~~~~s~~p~~q 780 (1066)
T 1tr2_A 701 QWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780 (1066)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCCHHHH
T ss_pred HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-------------------------------------HHhhc-----C-CHHHHH----------
Q psy5460 675 ERVLEAIKVLREQGM-------------------------------------EAMRK-----M-TEEDKQ---------- 701 (994)
Q Consensus 675 ~~v~~av~~l~~~~~-------------------------------------ea~~~-----l-~~e~k~---------- 701 (994)
.+|..+++.|.+.+. .+++. + +.++.+
T Consensus 781 ~~v~~a~k~l~~s~~~li~~aK~~a~~p~d~~~~~~l~~~~k~v~~~V~~l~~av~~~~p~~~~~~~~~~~~~~~~~~~~ 860 (1066)
T 1tr2_A 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDELAP 860 (1066)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------------
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHhcCCCChHHHHHHHHhhHHHHHHHHHHHHHHhccCCccCCCCccHHHHhhcccCCC
Confidence 999998887765321 11100 0 001111
Q ss_pred -----------------------HHHH------hhhhhhhhhhhhHHHhhhhcCCCchHHHHHHHHHHHHHHHHHhhccC
Q psy5460 702 -----------------------KIAQ------QVEFFRSEKLKFDREVAKWDDTGNDIIVLAKHMCMIMMEMTDFTRGR 752 (994)
Q Consensus 702 -----------------------kIa~------~~~~~~~~~~~l~~E~~kWd~~~NdIv~~ak~Ma~~m~~m~~ftrg~ 752 (994)
+|++ ...++...+++||+|++||++++||||+.||+||.+||+||+|+||+
T Consensus 861 ~~~~~~~~~~~~~~~~~p~e~~e~~~~~~~~~~~~~~i~~~~~~l~~e~~kW~~~~ndiI~~AK~ma~~m~~m~~~~~g~ 940 (1066)
T 1tr2_A 861 PKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940 (1066)
T ss_dssp ------------------CCCCCCCCCCCSSCSCCHHHHHHHHHHHHHHTTBCCTTCHHHHHHHHHHHHHHTHHHHTSCC
T ss_pred CCCCCcccccCCCCCCCChhhhhhccchhcccccchhHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHHHhccC
Confidence 1111 01223345789999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHhhhHHHHHHHHHhccCCCcchHHHHHHHHHhhhhhhhHhhhhhhccccccCCchhhHHHHHH
Q psy5460 753 GPLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQKPTNKDLLAYLQ 832 (994)
Q Consensus 753 g~lktt~dli~~Ak~iae~~~~l~~~a~~~a~~c~D~~~k~~Ll~~~e~i~t~~~QLki~s~vka~~~~~~~~~~~~~~~ 832 (994)
| +||+|||++||+|+++|.+|++++|+||++|+|+++|++||+||++||||||||+||++|||+++|.
T Consensus 941 ~--~~~~d~i~~Ak~ia~~~~~l~~~~r~~a~~~~d~~~k~~ll~~~~~i~~~~~QL~ils~VKa~~~g~---------- 1008 (1066)
T 1tr2_A 941 S--GTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGR---------- 1008 (1066)
T ss_dssp S--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCBHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTSSC----------
T ss_pred C--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHhcc----------
Confidence 9 9999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred HHHHHhhhhhhhhhhhhhhcccccccccccccch-hHHHHHHHHHHHHHHHHHHHHhHhhcccccc
Q psy5460 833 RIALYCHQLNITSKVKADVQNISGELIVSGLDSA-TSLIQAAKNLMNAVVLTVKSSYVASTKYPRQ 897 (994)
Q Consensus 833 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~li~~a~nlm~~v~~~v~~~~~as~k~~~~ 897 (994)
|++++|+ ++++ ++||+||||||++|++||++||+|||||+++
T Consensus 1009 -------------------~~~~~~~----~~~a~~~Li~~aknLm~aV~~~V~aa~~as~K~~~~ 1051 (1066)
T 1tr2_A 1009 -------------------TNISDEE----SEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTD 1051 (1066)
T ss_dssp -------------------CSCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGBCSC
T ss_pred -------------------cCCCccc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 4456666 2344 4999999999999999999999999999886
No 4
>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A
Probab=100.00 E-value=1.1e-67 Score=667.55 Aligned_cols=440 Identities=28% Similarity=0.394 Sum_probs=374.2
Q ss_pred CccchHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHhHHHHHHHHH
Q psy5460 1 METDIPILVLIEAAR-----SGNEKEVEKAAENFADHANKLVEVANLACSMSN-NEDGVKMVRYAASSIASLYTQVINAA 74 (994)
Q Consensus 1 ldt~~PL~~L~eAa~-----~G~ee~~~~~a~~F~eha~klvevA~lv~a~s~-d~~~vk~i~~aa~qLe~L~PQVi~Aa 74 (994)
+|+++||+.|++++. +||+++|.++++.|++|+++|+++|+++|++++ |++.++.|+.++.+|+.|+||||++|
T Consensus 600 ~d~~~~l~~L~eaa~~~~~~~~~~~~~~~~a~~~~~~~~~L~~~a~~~~~~~~~~~~~~~~i~~aa~~l~~~t~~lv~aa 679 (1066)
T 1tr2_A 600 SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVSAA 679 (1066)
T ss_dssp TCCSHHHHHHHHHHHSCTTCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 478999999999998 499999999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHHHHHHHHHHHHHHHhcCChhHHHhHHHHHHHH
Q psy5460 75 RILAARPRSKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSENHILEDVNKCVLALQEGDADILDRTAGAIRGR 154 (994)
Q Consensus 75 r~L~~~P~sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~~I~~d~~~c~~Ai~~~d~~~~~~~a~~I~gr 154 (994)
+++..||+|+.|++||+.++++|.+.|..|+.+||+|+|+++|+++++++|.+|++.|..|+++++++.++.+++.|++|
T Consensus 680 r~~~~~p~n~~Ak~~l~~~~~~~~~~v~~L~~~V~~i~dl~~f~aas~~~i~ed~~~~~~a~~~~~~~~l~~~a~~i~~~ 759 (1066)
T 1tr2_A 680 RILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARR 759 (1066)
T ss_dssp HHTTSSCSCTHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHhhhhcCCCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhhcCCCCchhhhHHHHhHHHHHHHHHHHHHH
Q psy5460 155 SARVANVVAAEMDNYEPGIYTERVLEAIKVLREQVMPNFATRVEVAVDALSTTPPKEVDENEFIDASRLVYDGVREIRRA 234 (994)
Q Consensus 155 a~RV~~Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~~np~~~~~~~~f~da~~~l~~~V~~vr~a 234 (994)
++|+++++++++++++||.|+++|+++++.|.+++.|+|.. .+.++.||.|+...+.|.++++.++++|+.|+++
T Consensus 760 ~~~l~~vv~~~~~~s~~p~~q~~v~~a~k~l~~s~~~li~~-----aK~~a~~p~d~~~~~~l~~~~k~v~~~V~~l~~a 834 (1066)
T 1tr2_A 760 ANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834 (1066)
T ss_dssp HHHHHHHHHHHHHTBCCHHHHHHHHHHHHHHHHTHHHHHHH-----HHHHHHCTTCTTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhHHHHH-----HHHHhcCCCChHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999873 2567899999999999999999999999999999
Q ss_pred HhccCCCCCCCCCCcccccccccc-ccccCCCCccCCCCCCCCccCCCchhHHhhcCChHHHHHHHH------HHHHHHh
Q psy5460 235 VLMNRTDEELDPEDIELDDQYTTS-EAATMPRSKELGVDEYPDISGITTAREAMRKMTEEDKQKIAQ------QVEFFRS 307 (994)
Q Consensus 235 v~~~~~p~el~~~~s~~~~~~~~~-~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~lp~~e~~ki~~------~~~~~~~ 307 (994)
|.+.. |+.++| .++++.-+..+ .+|++|++| .+ ..+|++++ +|++++++|.+ ....+..
T Consensus 835 v~~~~-p~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~---~p~e~~e~~~~~~~~~~~~~~i~~ 900 (1066)
T 1tr2_A 835 FQPQE-PDFPPP-PPDLEQLRLTDELAPPKPPLP---EG------EVPPPRPP---PPEEKDEEFPEQKAGEVINQPMMM 900 (1066)
T ss_dssp TSCCC-CCCCCC----------------------------------------------CCCCCCCCCCCSSCSCCHHHHH
T ss_pred HhccC-CccCCC-CccHHHHhhcccCCCCCCCCc---cc------ccCCCCCC---CChhhhhhccchhcccccchhHHH
Confidence 98754 554432 22332111111 134444433 11 11222222 12222223311 0122337
Q ss_pred hhhhhHHHhhhhccCCchHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHhhhhHHHHHHHHhhhCCCchhH
Q psy5460 308 EKLKFDREVAKWDDTGNDIIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPESSTK 387 (994)
Q Consensus 308 ~a~~l~~E~~kW~~~~N~IV~~Ak~Ma~~m~~M~~ftrg~G~l~tk~dli~~Ak~iae~~~~l~~lar~iA~~c~D~~~k 387 (994)
++++||+|++||++++||||..||+||.+|++||+|+||+| |||+|||.+||+|+++|.++++++|.||++|+|+++|
T Consensus 901 ~~~~l~~e~~kW~~~~ndiI~~AK~ma~~m~~m~~~~~g~~--~~~~d~i~~Ak~ia~~~~~l~~~~r~~a~~~~d~~~k 978 (1066)
T 1tr2_A 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS--GTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIR 978 (1066)
T ss_dssp HHHHHHHHHTTBCCTTCHHHHHHHHHHHHHHTHHHHTSCCS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCBHHHH
T ss_pred HHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 89999999999999999999999999999999999999998 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccc---ccccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhh
Q psy5460 388 KDLLAYLQRIALYCHQLNITSKVKADV---QNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKSSYVASTKYPRQNQVA 464 (994)
Q Consensus 388 ~~LL~~~e~I~~~~~QL~i~s~vKa~~---~~~g~e~~~s~~~~~~~lI~~AknLm~~V~~tv~~~~~as~K~~~~~~l~ 464 (994)
.+||.||++|++|||||+||++||+++ ++.|.++. .+..++||++|||||++|++||++||+||+||++..++.
T Consensus 979 ~~ll~~~~~i~~~~~QL~ils~VKa~~~g~~~~~~~~~---~~a~~~Li~~aknLm~aV~~~V~aa~~as~K~~~~~~~~ 1055 (1066)
T 1tr2_A 979 TNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEES---EQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFT 1055 (1066)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHTSSCCSCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGBCSCCSCC
T ss_pred HHHHHHHHHHhHHhHHHHHHHHHHHHHhcccCCCcccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccce
Confidence 999999999999999999999999999 44443322 123459999999999999999999999999999877654
No 5
>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A
Probab=100.00 E-value=3.6e-49 Score=426.53 Aligned_cols=238 Identities=71% Similarity=1.068 Sum_probs=233.9
Q ss_pred CccchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhC
Q psy5460 1 METDIPILVLIEAARSGNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAAR 80 (994)
Q Consensus 1 ldt~~PL~~L~eAa~~G~ee~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~ 80 (994)
+|+++||+.|++||..||+++|++|++.|++|+++|+++|+++|++|+|+++++.|+.++.+++.|+||||++||+|+.|
T Consensus 19 ~~~~~pl~~L~~AA~~g~~~~~~~~~~~f~~~~~~l~~~aklva~~s~~~~~~~~v~~aa~~~~~l~pQvv~aar~l~~~ 98 (256)
T 1h6g_A 19 LETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAK 98 (256)
T ss_dssp TCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhccHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHHHHHHHHHHHHHHHhcCChhHHHhHHHHHHHHHhHHHH
Q psy5460 81 PRSKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSENHILEDVNKCVLALQEGDADILDRTAGAIRGRSARVAN 160 (994)
Q Consensus 81 P~sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~~I~~d~~~c~~Ai~~~d~~~~~~~a~~I~gra~RV~~ 160 (994)
|+|+.|+|||++|+++|.+.|+.|+.+||++++++|||++||++|.+|++.|+.|++.+||+.|+++++.|+||++||++
T Consensus 99 p~s~~a~E~l~~~~~~w~~~v~~L~~~vd~~~~~~~fl~ase~~i~~~~~~c~~al~~~d~~~~~~~a~~i~~~a~rv~~ 178 (256)
T 1h6g_A 99 PQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIH 178 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhhcCCCCchhhhHHHHhHHHHHHHHHHHHHHHhcc
Q psy5460 161 VVAAEMDNYEPGIYTERVLEAIKVLREQVMPNFATRVEVAVDALSTTPPKEVDENEFIDASRLVYDGVREIRRAVLMN 238 (994)
Q Consensus 161 Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~~np~~~~~~~~f~da~~~l~~~V~~vr~av~~~ 238 (994)
++++||||+|||.|+++|++++++|+++++|.|.++++.|+..++.||+|+.+.++|+++++.|+++|++||++|+|+
T Consensus 179 v~k~e~d~~ed~~~~~~v~~a~~~L~~a~~p~mv~~ak~~~~~~a~np~d~~~~~~~~~a~~~L~~~v~~vr~av~~~ 256 (256)
T 1h6g_A 179 VVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMI 256 (256)
T ss_dssp HHHHHTTTSCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcCCChHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999988889999999999999999999999999999999999999999974
No 6
>1qkr_A Vinculin, tail domain; actin cytoskeleton, cell adhesion, helical bundle, lipid binding; 1.8A {Gallus gallus} SCOP: a.24.9.1 PDB: 3h2u_A 3h2v_A 1rke_B 3myi_A
Probab=100.00 E-value=2.5e-49 Score=402.27 Aligned_cols=154 Identities=33% Similarity=0.489 Sum_probs=142.1
Q ss_pred hhhhhhhhHHHhhhhcCCCchHHHHHHHHHHHHHHHHHhhccCCCCCChHHHHHHHHHHHHhhhHHHHHHHHHhccCCCc
Q psy5460 710 FRSEKLKFDREVAKWDDTGNDIIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPES 789 (994)
Q Consensus 710 ~~~~~~~l~~E~~kWd~~~NdIv~~ak~Ma~~m~~m~~ftrg~g~lktt~dli~~Ak~iae~~~~l~~~a~~~a~~c~D~ 789 (994)
+...++++|+|++||++++||||++||+||.||++||+|+||+| +||+|||++||+||++|++|++++|+||++|||+
T Consensus 20 i~~aa~~l~~E~~KW~~~~NdII~~Ak~Ma~~m~~M~~ftrG~g--~t~~dlI~~Ak~iAe~~~~l~k~ar~iA~qc~D~ 97 (188)
T 1qkr_A 20 MMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS--GNKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK 97 (188)
T ss_dssp HHHHHHHHHHHHTTBCCTTCHHHHHHHHHHHHHHHHHHHTTSCG--GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHccCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 34557899999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhhhhhhHhhhhhhccccccCCchhhHHHHHHHHHHHhhhhhhhhhhhhhhcccccccccccccchhHH
Q psy5460 790 STKKDLLAYLQRIALYCHQLNITSKVKADVQKPTNKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSGLDSATSL 869 (994)
Q Consensus 790 ~~k~~Ll~~~e~i~t~~~QLki~s~vka~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 869 (994)
++|++||++|+|||||||||||||+|||+++|. +++++++. .++.++|
T Consensus 98 ~~k~~Ll~~~~rI~t~~~QLkIls~VKA~~~g~-----------------------------~~~~~~~~---~~a~e~L 145 (188)
T 1qkr_A 98 RIRTNLLQVCERIPTISTQLKILSTVKATMLGR-----------------------------TNISDEES---EQATEML 145 (188)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC-----------------------------TTSCHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccccccc-----------------------------cccccchh---hHHHHHH
Confidence 999999999999999999999999999998876 34455552 2334599
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccccc
Q psy5460 870 IQAAKNLMNAVVLTVKSSYVASTKYPRQ 897 (994)
Q Consensus 870 i~~a~nlm~~v~~~v~~~~~as~k~~~~ 897 (994)
|+||||||++|++||++||+|||||.++
T Consensus 146 Iq~AkNLM~aV~~tVka~~~as~K~~~~ 173 (188)
T 1qkr_A 146 VHNAQNLMQSVKETVREAEAASIKIRTD 173 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999886
No 7
>3vf0_A Vinculin, metavinculin; cytoskeletal F-actin binding protein, CEL adhesion-protein binding complex; HET: EPE; 2.54A {Homo sapiens}
Probab=100.00 E-value=2.5e-47 Score=403.07 Aligned_cols=156 Identities=35% Similarity=0.509 Sum_probs=142.5
Q ss_pred hhhhhhhhhHHHhhhhcCCCchHHHHHHHHHHHHHHHHHhhccCCCCCChHHHHHHHHHHHHhhhHHHHHHHHHhccCCC
Q psy5460 709 FFRSEKLKFDREVAKWDDTGNDIIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPE 788 (994)
Q Consensus 709 ~~~~~~~~l~~E~~kWd~~~NdIv~~ak~Ma~~m~~m~~ftrg~g~lktt~dli~~Ak~iae~~~~l~~~a~~~a~~c~D 788 (994)
.+...+++||+|++|||+++||||++||+||.||++||+|||| || +||+|||+|||+||++|++|++++|+||++|+|
T Consensus 114 pi~~Aa~~ld~Ev~KWdd~~NdII~~AK~MA~mM~~Ms~ftRG-g~-kTt~DLI~~AK~IAe~g~~l~k~ar~iA~qCtD 191 (283)
T 3vf0_A 114 PILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRG-GS-GTKRALIQCAKDIAKASDEVTRLAKEVAKQCTD 191 (283)
T ss_dssp HHHHHHHHHHHHHHTBCCTTCHHHHHHHHHHHHHHHHHHHTTC-CT-THHHHHHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred chHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHhc-CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3445678999999999999999999999999999999999999 45 999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHhhhhhhhHhhhhhhccccccCCchhhHHHHHHHHHHHhhhhhhhhhhhhhhcccccccccccccchhH
Q psy5460 789 SSTKKDLLAYLQRIALYCHQLNITSKVKADVQKPTNKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSGLDSATS 868 (994)
Q Consensus 789 ~~~k~~Ll~~~e~i~t~~~QLki~s~vka~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (994)
+++|++||++|||||||||||||||+|||+++|. |+++++++ .++.++
T Consensus 192 ~r~K~~LL~~lerIpti~~QLkIls~VKA~~lg~-----------------------------q~~s~~~~---~sa~es 239 (283)
T 3vf0_A 192 KRIRTNLLQVCERIPTISTQLKILSTVKATMLGR-----------------------------TNISDEES---EQATEM 239 (283)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTC-----------------------------SSCCHHHH---HHHHHH
T ss_pred hhHHHHHHHHHhhhhhHHHHHHHHHHhccccccc-----------------------------ccccchhh---HHHHHH
Confidence 9999999999999999999999999999998776 44455552 234459
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccccccc
Q psy5460 869 LIQAAKNLMNAVVLTVKSSYVASTKYPRQN 898 (994)
Q Consensus 869 li~~a~nlm~~v~~~v~~~~~as~k~~~~~ 898 (994)
||+||||||++|++||++||+|||||+.+.
T Consensus 240 LIqnAKNLM~aV~~tVka~eaASiKi~~d~ 269 (283)
T 3vf0_A 240 LVHNAQNLMQSVKETVREAEAASIKIRTDA 269 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSBCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999973
No 8
>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A
Probab=100.00 E-value=2.2e-40 Score=357.90 Aligned_cols=206 Identities=68% Similarity=1.010 Sum_probs=199.3
Q ss_pred hhhhhhhHHHHhhhhhcccccccchhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHH
Q psy5460 462 QVAKKSHTAIVDRILLVFSFMETDIPILVLIEAARSGNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAA 541 (994)
Q Consensus 462 ~l~~~~~~avv~~v~~~dsF~dt~~PL~~L~~Aa~~Gd~e~~~~~a~~F~eha~~l~evA~lv~~~s~ne~~~~~i~~aa 541 (994)
+|++.+++++++||+ |.|+|+++||+.|++|+..||+++|++|++.|++|+++|+++|+++|++|+|+++++.+++++
T Consensus 1 dL~~~l~~a~~~qv~--d~f~~~~~pl~~L~~AA~~g~~~~~~~~~~~f~~~~~~l~~~aklva~~s~~~~~~~~v~~aa 78 (256)
T 1h6g_A 1 DLRRQLRKAVMDHVS--DSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSA 78 (256)
T ss_dssp CHHHHHHHHHGGGTT--CTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHHHhccHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 578899999999999 559999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChhHhhhhHHHHHhhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhhcChHHHHHhhH
Q psy5460 542 SSIASLYTQVINAARILAARPRSKVAQENMDVFKEAWDSQSQVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSE 621 (994)
Q Consensus 542 ~~le~L~PQVI~Aar~l~~~P~sk~A~en~e~~~~~w~~~~~~~~e~~~~~k~~W~~~v~~L~~~vDdit~~~dFl~vse 621 (994)
.+++.|+||||+|||+|+.||+||+|+|||++|++ .|.+.|+.|+.+||++++++|||++|+
T Consensus 79 ~~~~~l~pQvv~aar~l~~~p~s~~a~E~l~~~~~------------------~w~~~v~~L~~~vd~~~~~~~fl~ase 140 (256)
T 1h6g_A 79 SQLEALCPQVINAALALAAKPQSKLAQENMDLFKE------------------QWEKQVRVLTDAVDDITSIDDFLAVSE 140 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHCSHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHhcCCCCHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 99999999999999999999999999999998654 688899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhhhhhhHHhhhhhHHHHHHHHhhhcCCCCcchHHHHHHHHHHHHH
Q psy5460 622 NHILEDVNKCVLALQEGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKVLREQ 687 (994)
Q Consensus 622 ~~i~~d~~~c~~Ai~~~~~~~l~~~a~~I~~ra~RV~~va~~e~~n~edp~~~~~v~~av~~l~~~ 687 (994)
++|.+|+++|+.|+..|||+.++++++.|+||++||++++++|++|++||.|+++|+.+++.|.+.
T Consensus 141 ~~i~~~~~~c~~al~~~d~~~~~~~a~~i~~~a~rv~~v~k~e~d~~ed~~~~~~v~~a~~~L~~a 206 (256)
T 1h6g_A 141 NHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNT 206 (256)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999998863
No 9
>3vf0_A Vinculin, metavinculin; cytoskeletal F-actin binding protein, CEL adhesion-protein binding complex; HET: EPE; 2.54A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=357.44 Aligned_cols=153 Identities=35% Similarity=0.539 Sum_probs=143.0
Q ss_pred hhhhhhHHHhhhhccCCchHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHhhhhHHHHHHHHhhhCCCchh
Q psy5460 307 SEKLKFDREVAKWDDTGNDIIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPESST 386 (994)
Q Consensus 307 ~~a~~l~~E~~kW~~~~N~IV~~Ak~Ma~~m~~M~~ftrg~G~l~tk~dli~~Ak~iae~~~~l~~lar~iA~~c~D~~~ 386 (994)
.++++||+|++||++++||||++||+||.+|++||+|+|| || |||+|||++||+||++|+++++++|+||++|+|+++
T Consensus 117 ~Aa~~ld~Ev~KWdd~~NdII~~AK~MA~mM~~Ms~ftRG-g~-kTt~DLI~~AK~IAe~g~~l~k~ar~iA~qCtD~r~ 194 (283)
T 3vf0_A 117 AAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRG-GS-GTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRI 194 (283)
T ss_dssp HHHHHHHHHHHTBCCTTCHHHHHHHHHHHHHHHHHHHTTC-CT-THHHHHHHHHHHHHHHHHHHHHHHHHHHTTBCCHHH
T ss_pred HHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHhc-CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Confidence 6899999999999999999999999999999999999999 55 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccc---ccccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhh
Q psy5460 387 KKDLLAYLQRIALYCHQLNITSKVKADV---QNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKSSYVASTKYPRQNQV 463 (994)
Q Consensus 387 k~~LL~~~e~I~~~~~QL~i~s~vKa~~---~~~g~e~~~s~~~~~~~lI~~AknLm~~V~~tv~~~~~as~K~~~~~~l 463 (994)
|.+||.+|++|++|||||+||++||+++ ++++.+..+ ++.++||+||||||++|++||++||+||+||+...|+
T Consensus 195 K~~LL~~lerIpti~~QLkIls~VKA~~lg~q~~s~~~~~---sa~esLIqnAKNLM~aV~~tVka~eaASiKi~~d~g~ 271 (283)
T 3vf0_A 195 RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESE---QATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF 271 (283)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHTCSSCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSBCTTCSC
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHhcccccccccccchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc
Confidence 9999999999999999999999999998 555544444 3466999999999999999999999999999998776
Q ss_pred h
Q psy5460 464 A 464 (994)
Q Consensus 464 ~ 464 (994)
+
T Consensus 272 ~ 272 (283)
T 3vf0_A 272 T 272 (283)
T ss_dssp C
T ss_pred e
Confidence 5
No 10
>1qkr_A Vinculin, tail domain; actin cytoskeleton, cell adhesion, helical bundle, lipid binding; 1.8A {Gallus gallus} SCOP: a.24.9.1 PDB: 3h2u_A 3h2v_A 1rke_B 3myi_A
Probab=100.00 E-value=5e-41 Score=341.38 Aligned_cols=163 Identities=31% Similarity=0.449 Sum_probs=146.8
Q ss_pred ChHHHHHHHHHHHHHHhhhhhhHHHhhhhccCCchHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHhhhhH
Q psy5460 291 TEEDKQKIAQQVEFFRSEKLKFDREVAKWDDTGNDIIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTNL 370 (994)
Q Consensus 291 p~~e~~ki~~~~~~~~~~a~~l~~E~~kW~~~~N~IV~~Ak~Ma~~m~~M~~ftrg~G~l~tk~dli~~Ak~iae~~~~l 370 (994)
++...++|. .++++||+|++||++++|+||.+||+||.+|++||+|+||+| |||+|||++||+||++|+++
T Consensus 13 ~~~~~~~i~-------~aa~~l~~E~~KW~~~~NdII~~Ak~Ma~~m~~M~~ftrG~g--~t~~dlI~~Ak~iAe~~~~l 83 (188)
T 1qkr_A 13 GEAINQPMM-------MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS--GNKRALIQCAKDIAKASDEV 83 (188)
T ss_dssp THHHHCHHH-------HHHHHHHHHHTTBCCTTCHHHHHHHHHHHHHHHHHHHTTSCG--GGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCchHH-------HHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHccCC--CCHHHHHHHHHHHHHHHHHH
Confidence 445555665 789999999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccccccccccchhcc--CCchHHHHHHHHHHHHHHHHHHH
Q psy5460 371 DKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSG--LDSATSLIQAAKNLMNAVVLTVK 448 (994)
Q Consensus 371 ~~lar~iA~~c~D~~~k~~LL~~~e~I~~~~~QL~i~s~vKa~~~~~g~e~~~s~--~~~~~~lI~~AknLm~~V~~tv~ 448 (994)
++++|.||++|+|+++|.+||.+|++||+|||||+||++||++++|. ..+|++ .++.++||++|||||++|++||+
T Consensus 84 ~k~ar~iA~qc~D~~~k~~Ll~~~~rI~t~~~QLkIls~VKA~~~g~--~~~~~~~~~~a~e~LIq~AkNLM~aV~~tVk 161 (188)
T 1qkr_A 84 TRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGR--TNISDEESEQATEMLVHNAQNLMQSVKETVR 161 (188)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC--TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChHHHHHHHHHHHhhhHHHHHHHHHHHhccccccc--cccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999744 223332 12356999999999999999999
Q ss_pred HHHHHhccccchhhhh
Q psy5460 449 SSYVASTKYPRQNQVA 464 (994)
Q Consensus 449 ~~~~as~K~~~~~~l~ 464 (994)
+||+||+||++..++.
T Consensus 162 a~~~as~K~~~~~~~~ 177 (188)
T 1qkr_A 162 EAEAASIKIRTDAGFT 177 (188)
T ss_dssp HHHHHTTSCSSCGGGS
T ss_pred HHHHHHHHHhhcCCce
Confidence 9999999999876644
No 11
>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}
Probab=99.01 E-value=9.1e-10 Score=106.57 Aligned_cols=91 Identities=15% Similarity=0.202 Sum_probs=84.5
Q ss_pred hcCChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhhcCCCCchhhhH
Q psy5460 137 QEGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKVLREQVMPNFATRVEVAVDALSTTPPKEVDENE 216 (994)
Q Consensus 137 ~~~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~~np~~~~~~~~ 216 (994)
..+||+.|+++++.|++.++|+++++|+|+|+++||.|+++|+.+.++|.+++.|||..+ +..+.||.|+.....
T Consensus 35 s~~~p~~Mv~~ak~iAr~a~~Li~~~K~eAd~seDp~~~~rLl~AAk~La~At~~MVeaA-----K~~A~NP~d~~~q~~ 109 (131)
T 2l7a_A 35 SMGDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAA-----KGAAAHPDSEEQQQR 109 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHSSSCHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHcCCCCHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999997733 566799999999999
Q ss_pred HHHhHHHHHHHHHHHH
Q psy5460 217 FIDASRLVYDGVREIR 232 (994)
Q Consensus 217 f~da~~~l~~~V~~vr 232 (994)
|++++..|...++...
T Consensus 110 Lr~Aae~L~~at~~~~ 125 (131)
T 2l7a_A 110 LREAAEGLRMATNAAA 125 (131)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988763
No 12
>1dow_A Alpha-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} SCOP: a.24.9.1 PDB: 1dov_A
Probab=98.21 E-value=0.00012 Score=76.28 Aligned_cols=177 Identities=14% Similarity=0.111 Sum_probs=123.4
Q ss_pred HHHHHhhhhHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccccccccccchhccCCchHHHHHHHHHHH
Q psy5460 361 KKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSGLDSATSLIQAAKNLM 440 (994)
Q Consensus 361 k~iae~~~~l~~lar~iA~~c~D~~~k~~LL~~~e~I~~~~~QL~i~s~vKa~~~~~g~e~~~s~~~~~~~lI~~AknLm 440 (994)
..+..+...|.+.|+.+++.+|| .|.++...|+++..-+.-|...+..=..-|. +. ..=..+|..+++|+
T Consensus 7 ~aV~~Av~nfv~vG~~ia~e~~~--lk~dM~~A~~~v~~ag~~l~~a~~~~~~dP~-------s~-~~R~~lV~aaR~lL 76 (205)
T 1dow_A 7 ASVEQATENFLEKGDKIAKESQF--LKEELVVAVEDVRKQGDLMKSAAGEFADDPC-------SS-VKRGNMVRAARALL 76 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-------CH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-------Ch-hhHHHHHHHHHHHH
Confidence 34666778899999999999998 7999999999999887766544321111110 00 11236999999999
Q ss_pred HHHHHHHHHHHHHhccccchhhhhhhhhHHHHhhhhhcccccccchhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Q psy5460 441 NAVVLTVKSSYVASTKYPRQNQVAKKSHTAIVDRILLVFSFMETDIPILVLIEAARSGNEKEVEKAAENFADHANKLVEV 520 (994)
Q Consensus 441 ~~V~~tv~~~~~as~K~~~~~~l~~~~~~avv~~v~~~dsF~dt~~PL~~L~~Aa~~Gd~e~~~~~a~~F~eha~~l~ev 520 (994)
.+|..++=.+- .+.|.+|... ...-+..|...= +..++.+..+.|.+....|.++
T Consensus 77 s~vtrlLllaD-----------------~~~Vrkil~~-----~~~v~~~L~~le---~~~s~~el~~~f~~f~~~m~~l 131 (205)
T 1dow_A 77 SAVTRLLILAD-----------------MADVYKLLVQ-----LKVVEDGILKLR---NAGNEQDLGIQYKALKPEVDKL 131 (205)
T ss_dssp HHHHHHHHHHH-----------------HHHHHHHHHH-----HHHHHHHHHHHH---TCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHH-----HHHHHHHHHHHH---hcCCHHHHHHHHHHHhHHHHHH
Confidence 99999876442 2223333210 000011122222 2334455567777777888899
Q ss_pred HHHHhcc---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHhhhhH
Q psy5460 521 ANLACSM---SNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMD 572 (994)
Q Consensus 521 A~lv~~~---s~ne~~~~~i~~aa~~le~L~PQVI~Aar~l~~~P~sk~A~en~e 572 (994)
++++..- =.++.....+..+...|+...|.++.+.++.+.||+...|++|-|
T Consensus 132 ~~l~~~Rq~dLk~~~~rd~l~aAr~~Lk~~sp~L~ta~k~~lrhp~~~~a~~nRd 186 (205)
T 1dow_A 132 NIMAAKRQQELKDVGNRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRD 186 (205)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 9988422 237888889999999999999999999999999999999999998
No 13
>3dyj_A Talin-1; helix bundles, cytoskeletal protein, integrin-bindin site, IBS2, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane; 1.85A {Mus musculus} PDB: 4dj9_B
Probab=98.01 E-value=0.0034 Score=69.30 Aligned_cols=210 Identities=18% Similarity=0.159 Sum_probs=155.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy5460 16 SGNEKEVEKAAENFADHANKLVEVANLACSM--SNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVF 93 (994)
Q Consensus 16 ~G~ee~~~~~a~~F~eha~klvevA~lv~a~--s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l 93 (994)
.|.-+.+...++.+-+-..+|.++++..++. +.|++....|.+++.-|-.-.-++|++.+.-..+|.+..+.++|..-
T Consensus 77 ~~tqe~La~aa~~~a~~i~~La~~vK~gAAsl~~~d~~tQv~lLna~kdVa~al~~Li~atK~A~G~~~~dpa~~~Lk~a 156 (332)
T 3dyj_A 77 AGSQEKLAQAAQSSVATITRLADVVKLGAASLGAEDPETQVVLINAVKDVAKALGDLISATKAAAGKVGDDPAVWQLKNS 156 (332)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCTTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhHHHHHHH
Confidence 4666788999999999999999999998874 57999999999999999999999999999999999988887777776
Q ss_pred HHHHHHHHHHHHHHH----hhhc------------------------------ChHHHHHHhHHHHHHHHHHHHHHHhcC
Q psy5460 94 KEAWDSQVRVLTEAV----DDIT------------------------------TIDDFLAVSENHILEDVNKCVLALQEG 139 (994)
Q Consensus 94 ~~~W~~~v~~L~~av----Ddit------------------------------d~~dFL~vSe~~I~~d~~~c~~Ai~~~ 139 (994)
-+.-...|..|...| |+.+ .+.||++.... +..-+.+-..|..++
T Consensus 157 Ak~mv~nV~sLlktVk~vede~~rG~RaLEaai~~I~~el~~~~s~~~p~~~~tpE~li~~ak~-vt~atakaVaA~ns~ 235 (332)
T 3dyj_A 157 AKVMVTNVTSLLKTVKAVEDEATKGTRALEATTEHIRQELAVFCSPEPPAKTSTPEDFIRMTKG-ITMATAKAVAAGNSC 235 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHH-HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHccCCCCCCcCCCCHHHHHHHHHH-HHHHHHHHHHhcCCC
Confidence 666667676666665 3333 34444444333 344444445555556
Q ss_pred ChhHHHhHHHHHHHHHhHHHHHHHhhhhcCC-CccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhhcCCCCchhhhHHH
Q psy5460 140 DADILDRTAGAIRGRSARVANVVAAEMDNYE-PGIYTERVLEAIKVLREQVMPNFATRVEVAVDALSTTPPKEVDENEFI 218 (994)
Q Consensus 140 d~~~~~~~a~~I~gra~RV~~Vak~e~dnse-dp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~~np~~~~~~~~f~ 218 (994)
.++.+...++.-+.-..-.+...+.-..+.+ ++.-|.++.+..+.+-..+.-++. +++.+..+| .+..++.+.
T Consensus 236 ~qeDii~aan~~r~aV~dll~~~k~aa~~~~~~~e~r~~~~~~~k~~a~~~~~LL~-----~v~~~~~~P-~~~~k~~L~ 309 (332)
T 3dyj_A 236 RQEDVIATANLSRRAIADMLRACKEAAFHPEVAPDVRLRALHYGRECANGYLELLD-----HVLLTLQKP-NPDLKQQLT 309 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHSC-CHHHHHHHH
T ss_pred CHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHhcCC-CHHHHHHHH
Confidence 6666666666555555667777777777777 678888888888888777766544 233455677 566777888
Q ss_pred HhHHHHHHHHHHHH
Q psy5460 219 DASRLVYDGVREIR 232 (994)
Q Consensus 219 da~~~l~~~V~~vr 232 (994)
+.++.|-++|.+|=
T Consensus 310 ~~Sr~VA~aVteLV 323 (332)
T 3dyj_A 310 GHSKRVAGSVTELI 323 (332)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888888873
No 14
>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 4e17_A 4e18_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A ...
Probab=98.00 E-value=0.00033 Score=75.54 Aligned_cols=186 Identities=13% Similarity=0.166 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccccccccccchhccCCchHHHH
Q psy5460 354 MDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSGLDSATSLI 433 (994)
Q Consensus 354 ~dli~~Ak~iae~~~~l~~lar~iA~~c~D~~~k~~LL~~~e~I~~~~~QL~i~s~vKa~~~~~g~e~~~s~~~~~~~lI 433 (994)
.|+-.-+..+..+...|.+.|..+|+...|+..|.++...|+.+..-+..|...+..=...|. +. ..=..+|
T Consensus 38 ~~~~~~~~aV~~Av~nfv~vG~~ia~~~ed~~lk~eM~~A~~~v~~ag~~l~~aa~~~~~dP~-------s~-~~R~~lV 109 (258)
T 3rf3_A 38 PDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPY-------SV-PARDYLI 109 (258)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-------CH-HHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------Ch-hhHHHHH
Confidence 466777788999999999999999998888899999999999999999988765432111111 10 1123799
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhhHHHHhhhhhcccccccchhHHHHHHHHh-cCCHHHHHHHHHHHHH
Q psy5460 434 QAAKNLMNAVVLTVKSSYVASTKYPRQNQVAKKSHTAIVDRILLVFSFMETDIPILVLIEAAR-SGNEKEVEKAAENFAD 512 (994)
Q Consensus 434 ~~AknLm~~V~~tv~~~~~as~K~~~~~~l~~~~~~avv~~v~~~dsF~dt~~PL~~L~~Aa~-~Gd~e~~~~~a~~F~e 512 (994)
..|++|+.+|..++-.+- .+.|.++... .+.+.+... -...+++.+....|.+
T Consensus 110 ~aAR~lLs~vtrlLllaD-----------------~~dVr~il~~---------~~~v~~~l~~l~~~~~~~el~~~~~~ 163 (258)
T 3rf3_A 110 DGSRGILSGTSDLLLTFD-----------------EAEVRKIIRV---------CKGILEYLTVAEVVETMEDLVTYTKN 163 (258)
T ss_dssp HHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHH---------HHHHHHHHTTGGGCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHH---------HHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 999999999999876542 2223333210 111222211 1223344455667777
Q ss_pred HHHHHHHHHHHHh---ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCChhHhhhhHH
Q psy5460 513 HANKLVEVANLAC---SMSNNEDGVKMVRYAASSIASLYTQVINAARILAAR-----PRSKVAQENMDV 573 (994)
Q Consensus 513 ha~~l~evA~lv~---~~s~ne~~~~~i~~aa~~le~L~PQVI~Aar~l~~~-----P~sk~A~en~e~ 573 (994)
....|.++++++. .=-.|+.....+..+...|+...|.++.+.++.+.| |+...|++|-|-
T Consensus 164 f~~~~~~L~~~~~~Rq~eL~~~~~r~~l~~Ar~~Lk~~~p~L~ta~k~~lrh~~~~~~~~~~a~~nRd~ 232 (258)
T 3rf3_A 164 LGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNF 232 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTBSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHhHHH
Confidence 7777888888884 333488889999999999999999999999999999 888888888664
No 15
>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 4e17_A 4e18_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A ...
Probab=97.68 E-value=0.019 Score=61.89 Aligned_cols=209 Identities=12% Similarity=0.107 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH
Q psy5460 20 KEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKEAWDS 99 (994)
Q Consensus 20 e~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~~W~~ 99 (994)
......++......+.+++++...+..+.|+.....+..|...++.=+..+..++..+..+|.|...+..|=.=-+.--.
T Consensus 38 ~~~~~~~~aV~~Av~nfv~vG~~ia~~~ed~~lk~eM~~A~~~v~~ag~~l~~aa~~~~~dP~s~~~R~~lV~aAR~lLs 117 (258)
T 3rf3_A 38 PDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILS 117 (258)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHH
Confidence 34667788889999999999999988889999999999999999999999999999999999999999988777777777
Q ss_pred HHHHHHHHHhhhcChHHHHHHhHHHHHHHHHHHHHHHhc----CChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccch
Q psy5460 100 QVRVLTEAVDDITTIDDFLAVSENHILEDVNKCVLALQE----GDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYT 175 (994)
Q Consensus 100 ~v~~L~~avDditd~~dFL~vSe~~I~~d~~~c~~Ai~~----~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~ 175 (994)
.|.+|.-+.|.+. + ..|....+++...+.. .+.+.|......+-.....+...+.+...---||.+|
T Consensus 118 ~vtrlLllaD~~d-V--------r~il~~~~~v~~~l~~l~~~~~~~el~~~~~~f~~~~~~L~~~~~~Rq~eL~~~~~r 188 (258)
T 3rf3_A 118 GTSDLLLTFDEAE-V--------RKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHR 188 (258)
T ss_dssp HHHHHHHHHHHHH-H--------HHHHHHHHHHHHHHTTGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTBSCHHHH
T ss_pred HHHHHHHHHHHHH-H--------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHH
Confidence 7888887777654 2 3455555555555432 3557788888888887777777777766667899999
Q ss_pred HHHHHHHHHHHHhhchhhHhHHHHHHHH-hhcCCCCchhhhHHHHhHHHHHHHHHHHHHHHhcc
Q psy5460 176 ERVLEAIKVLREQVMPNFATRVEVAVDA-LSTTPPKEVDENEFIDASRLVYDGVREIRRAVLMN 238 (994)
Q Consensus 176 ~~V~~a~~~L~~~i~p~v~~av~~a~~~-l~~np~~~~~~~~f~da~~~l~~~V~~vr~av~~~ 238 (994)
+.+..+-..|+..+ |++--+.+.++.- ...||..+.+..+=-.....+.+++..|..++.+.
T Consensus 189 ~~l~~Ar~~Lk~~~-p~L~ta~k~~lrh~~~~~~~~~~a~~nRd~v~~~m~~al~~I~~vlq~~ 251 (258)
T 3rf3_A 189 VMLVNSMNTVKELL-PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLT 251 (258)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhccCCCCCCcHHHHHhHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999665 8877676776643 23345555555544556788889999998888644
No 16
>3dyj_A Talin-1; helix bundles, cytoskeletal protein, integrin-bindin site, IBS2, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane; 1.85A {Mus musculus} PDB: 4dj9_B
Probab=97.35 E-value=0.29 Score=54.13 Aligned_cols=310 Identities=17% Similarity=0.172 Sum_probs=190.9
Q ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHHHHHH
Q psy5460 51 DGVKMVRYAASSIASLYTQVINAARILAA---RPRSKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSENHILE 127 (994)
Q Consensus 51 ~~vk~i~~aa~qLe~L~PQVi~Aar~L~~---~P~sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~~I~~ 127 (994)
++-..+..|+..|..+--.+=...+--.+ +|++ .++|+.+++.-...+..|.+..+..+
T Consensus 12 ~GtqaC~~A~~~v~~ii~DLdtt~lFA~AGtL~~~~---~~~f~~~~e~Ilk~ak~Lve~~~~Lv--------------- 73 (332)
T 3dyj_A 12 TGTQACITAASAVSGIIADLDTTIMFATAGTLNREG---AETFADHREGILKTAKVLVEDTKVLV--------------- 73 (332)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCT---TCCGGGTHHHHHHHHHHHHHHHHHHH---------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CcCHHHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 44567788888888777666533221111 4554 56677766666555554444333222
Q ss_pred HHHHHHHHHhcCChhHHHhHHHHHHHHHhHHHHHHHhhhhcC--CCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhh
Q psy5460 128 DVNKCVLALQEGDADILDRTAGAIRGRSARVANVVAAEMDNY--EPGIYTERVLEAIKVLREQVMPNFATRVEVAVDALS 205 (994)
Q Consensus 128 d~~~c~~Ai~~~d~~~~~~~a~~I~gra~RV~~Vak~e~dns--edp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~ 205 (994)
.+ ....-+.+-..+.++..+..+..+++|.-.... +||.--.-|+.+++-+-....-++. .. +..+
T Consensus 74 ------~~-a~~tqe~La~aa~~~a~~i~~La~~vK~gAAsl~~~d~~tQv~lLna~kdVa~al~~Li~----at-K~A~ 141 (332)
T 3dyj_A 74 ------QN-AAGSQEKLAQAAQSSVATITRLADVVKLGAASLGAEDPETQVVLINAVKDVAKALGDLIS----AT-KAAA 141 (332)
T ss_dssp ------HH-SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHHH----HH-HHTT
T ss_pred ------Hh-hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH----HH-Hhcc
Confidence 22 223346666777778888888888888888875 9998888888888877766644443 33 3447
Q ss_pred cCCCCchhhhHHHHhHHHHHHHHHHHHHHHhccCCCCCCCCCCccccccccccccccCCCCccCCCCCCCCccCCCchhH
Q psy5460 206 TTPPKEVDENEFIDASRLVYDGVREIRRAVLMNRTDEELDPEDIELDDQYTTSEAATMPRSKELGVDEYPDISGITTARE 285 (994)
Q Consensus 206 ~np~~~~~~~~f~da~~~l~~~V~~vr~av~~~~~p~el~~~~s~~~~~~~~~~a~~~~~~s~~~~~~~~~~~~~~~~~~ 285 (994)
.+|.++.....+.++++.+-.+|..+-+.|.... + +.. -| .|+
T Consensus 142 G~~~~dpa~~~Lk~aAk~mv~nV~sLlktVk~ve----------d----e~~--------------------rG---~Ra 184 (332)
T 3dyj_A 142 GKVGDDPAVWQLKNSAKVMVTNVTSLLKTVKAVE----------D----EAT--------------------KG---TRA 184 (332)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------H----HHH--------------------HH---HHH
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh----------c----ccc--------------------ch---hHH
Confidence 7888888899999999999999988866552110 0 000 00 011
Q ss_pred HhhcCChHHHHHHHHHHHHHHhhhhhhHHHhhhhccCCchHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHH
Q psy5460 286 AMRKMTEEDKQKIAQQVEFFRSEKLKFDREVAKWDDTGNDIIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISE 365 (994)
Q Consensus 286 ~~~~lp~~e~~ki~~~~~~~~~~a~~l~~E~~kW~~~~N~IV~~Ak~Ma~~m~~M~~ftrg~G~l~tk~dli~~Ak~iae 365 (994)
. +.--+.|.++...|... +.-.-....-++|+.+|.+..-..+...-... ++.+|+|.+|.-...
T Consensus 185 L-----Eaai~~I~~el~~~~s~------~~p~~~~tpE~li~~ak~vt~atakaVaA~ns----~~qeDii~aan~~r~ 249 (332)
T 3dyj_A 185 L-----EATTEHIRQELAVFCSP------EPPAKTSTPEDFIRMTKGITMATAKAVAAGNS----CRQEDVIATANLSRR 249 (332)
T ss_dssp H-----HHHHHHHHHHHHHHHSS------SCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHccCCC------CCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCC----CCHHHHHHHHHhHHH
Confidence 1 00001111111111100 00000123456788888877665555444332 489999999999999
Q ss_pred hhhhHHHHHHHHhhhCC-CchhHHHHHHHHHHHHHHHHHhhhhhhcccccccccccchhccCCchHHHHHHHHHHHHHHH
Q psy5460 366 AGTNLDKLTRQIADQCP-ESSTKKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVV 444 (994)
Q Consensus 366 ~~~~l~~lar~iA~~c~-D~~~k~~LL~~~e~I~~~~~QL~i~s~vKa~~~~~g~e~~~s~~~~~~~lI~~AknLm~~V~ 444 (994)
.-..|...++..+..+. ++..|..++.+...+..-+ ++.+..+|.-.++.+.+ .-.++-..+|..-.+|.
T Consensus 250 aV~dll~~~k~aa~~~~~~~e~r~~~~~~~k~~a~~~--~~LL~~v~~~~~~P~~~-------~k~~L~~~Sr~VA~aVt 320 (332)
T 3dyj_A 250 AIADMLRACKEAAFHPEVAPDVRLRALHYGRECANGY--LELLDHVLLTLQKPNPD-------LKQQLTGHSKRVAGSVT 320 (332)
T ss_dssp HHHHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHSCCHH-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhcCCCHH-------HHHHHHHHHHHHHHHHH
Confidence 99999999999999998 5677888888776665444 22244444433333221 12357788999999999
Q ss_pred HHHHHHH
Q psy5460 445 LTVKSSY 451 (994)
Q Consensus 445 ~tv~~~~ 451 (994)
++|.+|+
T Consensus 321 eLV~aa~ 327 (332)
T 3dyj_A 321 ELIQAAE 327 (332)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999886
No 17
>2x0c_A Talin-1; cytoskeleton, cell membrane, actin, synemin, integrin, vincu cell adhesion, cell projection; 2.00A {Mus musculus} PDB: 1zw3_B
Probab=97.27 E-value=0.028 Score=62.07 Aligned_cols=203 Identities=15% Similarity=0.145 Sum_probs=130.5
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH------HHh----------------------------hcCCCh-h
Q psy5460 7 ILVLIEAARSGNEKEVEKAAENFADHANKLVEVAN------LAC----------------------------SMSNNE-D 51 (994)
Q Consensus 7 L~~L~eAa~~G~ee~~~~~a~~F~eha~klvevA~------lv~----------------------------a~s~d~-~ 51 (994)
+..|..+++.||++.|-..+....+....|++.++ -|+ ....++ .
T Consensus 57 m~~l~~~a~~~~~~~~g~a~~~~a~al~~Lteaa~~aaylvgVs~p~s~~g~~glvD~~~~~ra~~~i~~ac~~~~~~~~ 136 (309)
T 2x0c_A 57 MTGISQNAKNGNLPEFGDAIATASKALCGFTEAAAQAAYLVGVSDPNSQAGQQGLVEPTQFARANQAIQMACQSLGEPGC 136 (309)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCBCCBCCSSCSHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHcCChhhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCccccchHHHHHHHHHHHHHHHhccCCccc
Confidence 44566667789998888887888888888888776 222 322233 4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHHHHHHHHHH
Q psy5460 52 GVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSENHILEDVNK 131 (994)
Q Consensus 52 ~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~~I~~d~~~ 131 (994)
..+.|..++..+-.=+..+++++|....+|+++.++.||...-+.-...+..|..++-++..- | ++. ....
T Consensus 137 ~q~~vL~~A~~va~~t~~L~~~cr~as~~~~n~~~k~ql~~~ak~va~st~~lV~~iK~ld~~--~---~~~----~r~~ 207 (309)
T 2x0c_A 137 TQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTANLVKTIKALDGD--F---TEE----NRAQ 207 (309)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--C---CHH----HHHH
T ss_pred cHHHHHHHHHHHHHhhHHHHHHHHHHhcCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--C---Cch----hHHH
Confidence 555666666677777778889999999999999999999888888877776666554333321 0 000 0022
Q ss_pred HHHHHhcCChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCcc--------chHHHHHHHHHHHHhhchhhHhHHHHHHHH
Q psy5460 132 CVLALQEGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGI--------YTERVLEAIKVLREQVMPNFATRVEVAVDA 203 (994)
Q Consensus 132 c~~Ai~~~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~--------y~~~V~~a~~~L~~~i~p~v~~av~~a~~~ 203 (994)
|.. .++.+..-+..++..+. .-+...-|. ..+.|..+.+.+.+...-++. +.+.
T Consensus 208 ~~~------------aa~~L~~Av~~Lv~~A~-spefa~~~~~is~~~~~aq~~il~a~r~v~~~s~~ll~-----taK~ 269 (309)
T 2x0c_A 208 CRA------------ATAPLLEAVDNLSAFAS-NPEFSSVPAQISPEGRAAMEPIVISAKTMLESAGGLIQ-----TARA 269 (309)
T ss_dssp HHH------------HHHHHHHHHHHHHHHHT-SSSSSCBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHH
T ss_pred HHH------------HHHHHHHHHHHHHHHhc-ChhhhhcccccChhhHHHHHHHHHHHHHHHHHHHHHHH-----HHHH
Confidence 222 22333333334444443 112211111 234566666666555555544 3467
Q ss_pred hhcCCCCchhhhHHHHhHHHHHHHHHHHHHHHh
Q psy5460 204 LSTTPPKEVDENEFIDASRLVYDGVREIRRAVL 236 (994)
Q Consensus 204 l~~np~~~~~~~~f~da~~~l~~~V~~vr~av~ 236 (994)
++.||.|+...+.|..+++.|-++++.|=.++.
T Consensus 270 la~~P~dp~~~~~La~~ar~VSdsI~~Li~ai~ 302 (309)
T 2x0c_A 270 LAVNPRDPPRWSVLAGHSRTVSDSIKKLITSMR 302 (309)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999876663
No 18
>1sj8_A Talin 1; structural protein; 2.60A {Mus musculus} SCOP: a.215.1.1 a.216.1.1
Probab=97.07 E-value=0.076 Score=58.00 Aligned_cols=124 Identities=19% Similarity=0.208 Sum_probs=93.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhccCC--CCCChHHHHHHHHHHHHhhhHHHHHHHHHhccCCCcchHHHHHHHHHhhhh
Q psy5460 727 TGNDIIVLAKHMCMIMMEMTDFTRGRG--PLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIAL 804 (994)
Q Consensus 727 ~~NdIv~~ak~Ma~~m~~m~~ftrg~g--~lktt~dli~~Ak~iae~~~~l~~~a~~~a~~c~D~~~k~~Ll~~~e~i~t 804 (994)
..+.|+..|.++...-...-... |++ ....++.|+..||.+|.+...|..-++.++..|.|+..++.|+..+.+...
T Consensus 152 ~rq~ll~AA~~Vg~as~~~l~~i-~e~~~d~~~~e~Li~aAKAVA~ATa~LV~~Ak~Va~~~~d~e~Q~~lI~AA~~~A~ 230 (308)
T 1sj8_A 152 PRQNLLQAAGNVGQASGELLQQI-GESDTDPHFQDVLMQLANAVASAAAALVLKAKSVAQRTEDSGLQTQVIAAATQCAL 230 (308)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHT-TCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTSSSSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhHhHHHHHHHHhc-CccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 56779998888766544332221 221 234678999999999999999999999999999999999999888887777
Q ss_pred hhhHhhhhhhccccccCCchhhHHHHHHHHHHHhhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHHHHHHHH
Q psy5460 805 YCHQLNITSKVKADVQKPTNKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTV 884 (994)
Q Consensus 805 ~~~QLki~s~vka~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~a~nlm~~v~~~v 884 (994)
-..||=..+||||..... |.|+ ++|...+|..-.+|...|
T Consensus 231 sTsQLVA~sKV~Apti~s-------------~~cQ---------------------------eqL~~A~k~V~~av~~Lv 270 (308)
T 1sj8_A 231 STSQLVACTKVVAPTISS-------------PVCQ---------------------------EQLVEAGRLVAKAVEGCV 270 (308)
T ss_dssp HHHHHHHHHHHHTTTCSS-------------HHHH---------------------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccccCC-------------hHHH---------------------------HHHHHHHHHHHHHHHHHH
Confidence 667777777766532221 1121 589999999999999999
Q ss_pred HHHhHhh
Q psy5460 885 KSSYVAS 891 (994)
Q Consensus 885 ~~~~~as 891 (994)
+.|..++
T Consensus 271 ~~~~~a~ 277 (308)
T 1sj8_A 271 SASQAAT 277 (308)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 9999775
No 19
>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}
Probab=96.80 E-value=0.015 Score=56.37 Aligned_cols=90 Identities=20% Similarity=0.222 Sum_probs=81.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy5460 16 SGNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKE 95 (994)
Q Consensus 16 ~G~ee~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~ 95 (994)
.||.++.-..+..+-.++++|+.+++.-+.-+.|+..++.+..++..|..-++.+|++++..+.||+|..++.
T Consensus 36 ~~~p~~Mv~~ak~iAr~a~~Li~~~K~eAd~seDp~~~~rLl~AAk~La~At~~MVeaAK~~A~NP~d~~~q~------- 108 (131)
T 2l7a_A 36 MGDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAHPDSEEQQQ------- 108 (131)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHH-------
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH-------
Confidence 5899999999999999999999999998899999999999999999999999999999999999999966554
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5460 96 AWDSQVRVLTEAVDDIT 112 (994)
Q Consensus 96 ~W~~~v~~L~~avDdit 112 (994)
.|.+..++|+.++..++
T Consensus 109 ~Lr~Aae~L~~at~~~~ 125 (131)
T 2l7a_A 109 RLREAAEGLRMATNAAA 125 (131)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57778888888877764
No 20
>1dow_A Alpha-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} SCOP: a.24.9.1 PDB: 1dov_A
Probab=96.69 E-value=0.76 Score=47.77 Aligned_cols=193 Identities=16% Similarity=0.104 Sum_probs=139.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHH
Q psy5460 27 ENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKEAWDSQVRVLTE 106 (994)
Q Consensus 27 ~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~~W~~~v~~L~~ 106 (994)
+........++++++.++.-+.+ ....+-.|+..++.=+--+..++..+..+|.|...++.|=.=-+.--..|.+|.-
T Consensus 7 ~aV~~Av~nfv~vG~~ia~e~~~--lk~dM~~A~~~v~~ag~~l~~a~~~~~~dP~s~~~R~~lV~aaR~lLs~vtrlLl 84 (205)
T 1dow_A 7 ASVEQATENFLEKGDKIAKESQF--LKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLI 84 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 44455667788888888776654 7788889999999999999999999999999999888886666666677777777
Q ss_pred HHhhhcChHHHHHHhHHHHHHHHHHHHHH---Hh-cCChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccchHHHHHHH
Q psy5460 107 AVDDITTIDDFLAVSENHILEDVNKCVLA---LQ-EGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAI 182 (994)
Q Consensus 107 avDditd~~dFL~vSe~~I~~d~~~c~~A---i~-~~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~V~~a~ 182 (994)
++|.+. +...| ...++|... +. ..+.+.|+..-..+-...-.+.+.+.+-..---||..|+.+..+-
T Consensus 85 laD~~~-Vrkil--------~~~~~v~~~L~~le~~~s~~el~~~f~~f~~~m~~l~~l~~~Rq~dLk~~~~rd~l~aAr 155 (205)
T 1dow_A 85 LADMAD-VYKLL--------VQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGNRDQMAAAR 155 (205)
T ss_dssp HHHHHH-HHHHH--------HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHH-HHHHH--------HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 776654 43333 333333332 22 346688888888877777776666665555557899999999999
Q ss_pred HHHHHhhchhhHhHHHHHHHHhhcCCCCchhhhHHHHhHHHHHHHHHHHHHHH
Q psy5460 183 KVLREQVMPNFATRVEVAVDALSTTPPKEVDENEFIDASRLVYDGVREIRRAV 235 (994)
Q Consensus 183 ~~L~~~i~p~v~~av~~a~~~l~~np~~~~~~~~f~da~~~l~~~V~~vr~av 235 (994)
..|+... ||+--+.+.++ .+|..+.+..+=.....++.+++..|-+++
T Consensus 156 ~~Lk~~s-p~L~ta~k~~l----rhp~~~~a~~nRd~v~~qm~~al~~I~~v~ 203 (205)
T 1dow_A 156 GILQKNV-PILYTASQACL----QHPDVAAYKANRDLIYKQLQQAVTGISNAA 203 (205)
T ss_dssp HHHHHHH-HHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhh-HHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999766 77765555554 578777665554446777777777776655
No 21
>1sj8_A Talin 1; structural protein; 2.60A {Mus musculus} SCOP: a.215.1.1 a.216.1.1
Probab=96.64 E-value=0.41 Score=52.34 Aligned_cols=123 Identities=19% Similarity=0.188 Sum_probs=96.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhccCC--CCCCHHHHHHHHHHHHHhhhhHHHHHHHHhhhCCCchhHHHHHHHHHHHHH
Q psy5460 322 TGNDIIVLAKHMCMIMMEMTDFTRGRG--PLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIAL 399 (994)
Q Consensus 322 ~~N~IV~~Ak~Ma~~m~~M~~ftrg~G--~l~tk~dli~~Ak~iae~~~~l~~lar~iA~~c~D~~~k~~LL~~~e~I~~ 399 (994)
..+.|+..|.++.......-... |++ --..++.|++.||.+|.+...|..-++.++..|.|+..+..|...+.++..
T Consensus 152 ~rq~ll~AA~~Vg~as~~~l~~i-~e~~~d~~~~e~Li~aAKAVA~ATa~LV~~Ak~Va~~~~d~e~Q~~lI~AA~~~A~ 230 (308)
T 1sj8_A 152 PRQNLLQAAGNVGQASGELLQQI-GESDTDPHFQDVLMQLANAVASAAAALVLKAKSVAQRTEDSGLQTQVIAAATQCAL 230 (308)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHT-TCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTSSSSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhHhHHHHHHHHhc-CccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 45669999999877554332222 321 123688999999999999999999999999999999988889999999988
Q ss_pred HHHHhhhhhhcccccccccccchhccCCch--HHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy5460 400 YCHQLNITSKVKADVQNISGELIVSGLDSA--TSLIQAAKNLMNAVVLTVKSSYVAST 455 (994)
Q Consensus 400 ~~~QL~i~s~vKa~~~~~g~e~~~s~~~~~--~~lI~~AknLm~~V~~tv~~~~~as~ 455 (994)
-..||-.++|||++.-. ++. +.|...+|.+-.+|..+|+.|..++.
T Consensus 231 sTsQLVA~sKV~Apti~----------s~~cQeqL~~A~k~V~~av~~Lv~~~~~a~~ 278 (308)
T 1sj8_A 231 STSQLVACTKVVAPTIS----------SPVCQEQLVEAGRLVAKAVEGCVSASQAATE 278 (308)
T ss_dssp HHHHHHHHHHHHTTTCS----------SHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhhcccccC----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88999999999986642 223 46778888888888888888876543
No 22
>2x0c_A Talin-1; cytoskeleton, cell membrane, actin, synemin, integrin, vincu cell adhesion, cell projection; 2.00A {Mus musculus} PDB: 1zw3_B
Probab=96.47 E-value=0.1 Score=57.53 Aligned_cols=212 Identities=15% Similarity=0.166 Sum_probs=130.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHhhhhHHHHHHHHhhh--------------CCCchhHHHH
Q psy5460 325 DIIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTNLDKLTRQIADQ--------------CPESSTKKDL 390 (994)
Q Consensus 325 ~IV~~Ak~Ma~~m~~M~~ftrg~G~l~tk~dli~~Ak~iae~~~~l~~lar~iA~~--------------c~D~~~k~~L 390 (994)
.|...+|.+...|..|..-++. ++...+-..+++.++....|+..+++.||. ..|+. .+
T Consensus 45 ~l~~~sK~Lg~~m~~l~~~a~~----~~~~~~g~a~~~~a~al~~Lteaa~~aaylvgVs~p~s~~g~~glvD~~---~~ 117 (309)
T 2x0c_A 45 SVMENSKVLGEAMTGISQNAKN----GNLPEFGDAIATASKALCGFTEAAAQAAYLVGVSDPNSQAGQQGLVEPT---QF 117 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCBCCBCCSSCSH---HH
T ss_pred HHHHHhhHHHHHHHHHHHHHHc----CChhhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCccccchHH---HH
Confidence 3778899999999999988875 255556666788999999999888844444 22331 11
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccccccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhhHH
Q psy5460 391 LAYLQRIALYCHQLNITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKSSYVASTKYPRQNQVAKKSHTA 470 (994)
Q Consensus 391 L~~~e~I~~~~~QL~i~s~vKa~~~~~g~e~~~s~~~~~~~lI~~AknLm~~V~~tv~~~~~as~K~~~~~~l~~~~~~a 470 (994)
-.--..|..-|..+. .+ + ..-..++..|..++..-..++.+|..|+.|-..- ..++.+. .
T Consensus 118 ~ra~~~i~~ac~~~~------~~------~------~~q~~vL~~A~~va~~t~~L~~~cr~as~~~~n~-~~k~ql~-~ 177 (309)
T 2x0c_A 118 ARANQAIQMACQSLG------EP------G------CTQAQVLSAATIVAKHTSALCNSCRLASARTANP-TAKRQFV-Q 177 (309)
T ss_dssp HHHHHHHHHHHHHHH------SS------C------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCH-HHHHHHH-H
T ss_pred HHHHHHHHHHHhccC------Cc------c------ccHHHHHHHHHHHHHhhHHHHHHHHHHhcCcCCc-hHHHHHH-H
Confidence 111233334444331 00 0 1223578888888888888888888888764421 1111111 1
Q ss_pred HHhhhhhcccccccchhHHHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHHHHHH---HH---hccCC-ChhHHHH
Q psy5460 471 IVDRILLVFSFMETDIPILVLIEAAR-------SGNEKEVEKAAENFADHANKLVEVAN---LA---CSMSN-NEDGVKM 536 (994)
Q Consensus 471 vv~~v~~~dsF~dt~~PL~~L~~Aa~-------~Gd~e~~~~~a~~F~eha~~l~evA~---lv---~~~s~-ne~~~~~ 536 (994)
....|+ .-+..|+.+++ .++.++....+..|.+.++.|+..|+ |. ..++. +....+-
T Consensus 178 ~ak~va---------~st~~lV~~iK~ld~~~~~~~r~~~~~aa~~L~~Av~~Lv~~A~spefa~~~~~is~~~~~aq~~ 248 (309)
T 2x0c_A 178 SAKEVA---------NSTANLVKTIKALDGDFTEENRAQCRAATAPLLEAVDNLSAFASNPEFSSVPAQISPEGRAAMEP 248 (309)
T ss_dssp HHHHHH---------HHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSCBCCBCCHHHHHHHHH
T ss_pred HHHHHH---------HHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHhcChhhhhcccccChhhHHHHHH
Confidence 112222 11333444433 23335566667778888888888773 22 23343 3445678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHhhhhH
Q psy5460 537 VRYAASSIASLYTQVINAARILAARPRSKVAQENMD 572 (994)
Q Consensus 537 i~~aa~~le~L~PQVI~Aar~l~~~P~sk~A~en~e 572 (994)
|..+...+-.-+-++|..+|.++.+|.+..++.+|-
T Consensus 249 il~a~r~v~~~s~~ll~taK~la~~P~dp~~~~~La 284 (309)
T 2x0c_A 249 IVISAKTMLESAGGLIQTARALAVNPRDPPRWSVLA 284 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 888899999999999999999999999975554443
No 23
>1u89_A Talin 1, talin; 4-helix bundle, LEFT-handed, structural protein; NMR {Mus musculus} SCOP: a.216.1.1
Probab=96.05 E-value=0.035 Score=54.20 Aligned_cols=70 Identities=20% Similarity=0.263 Sum_probs=62.3
Q ss_pred cCChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhhcCCCCch
Q psy5460 138 EGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKVLREQVMPNFATRVEVAVDALSTTPPKEV 212 (994)
Q Consensus 138 ~~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~~np~~~~ 212 (994)
.+||+.|++++..|+.-+.++++..|.+++..+||.-+++++.+.++|-+....||. +| +..+.||.++.
T Consensus 66 ~gd~~eMvrqak~Laqat~~LV~~iK~eAe~~~D~~~q~rLL~AAk~lAdATa~mVe----AA-k~~a~nP~~~~ 135 (139)
T 1u89_A 66 MGDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVE----AA-KGAAAHPDSEE 135 (139)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHH----HH-HHTSSSCCSSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH----HH-HHHHhCCCchh
Confidence 588999999999999999999999999999999999999999999999999877755 33 56689998853
No 24
>3fyq_A CG6831-PA (talin); 5-helix bundle, cell adhesion; 1.95A {Drosophila melanogaster}
Probab=94.16 E-value=1.4 Score=45.16 Aligned_cols=84 Identities=23% Similarity=0.287 Sum_probs=64.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy5460 16 SGNEKEVEKAAENFADHANKLVEVANLACS--MSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVF 93 (994)
Q Consensus 16 ~G~ee~~~~~a~~F~eha~klvevA~lv~a--~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l 93 (994)
.|.-+.+...++.+-+...+|.++.+..++ ++.|++....|.+++.-|-.-..++|++.+.-..+|.+..+ |+.+
T Consensus 68 ~~tQe~LA~aa~~~v~~i~~La~~vK~gAAsl~s~dp~tQv~LLna~kdVa~aL~~Li~atK~a~g~~~~d~~---~~~L 144 (199)
T 3fyq_A 68 AGTQDQLANAAQNAVSTITQLAEAVKRGACSLGSTQPDSQVMVINAVKDVASALGDLINCTKLASGKSINDPS---MQDL 144 (199)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------C---HHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchH---HHHH
Confidence 578889999999999999999999999876 45699999999999999999999999999998888966666 4444
Q ss_pred HHHHHHHHH
Q psy5460 94 KEAWDSQVR 102 (994)
Q Consensus 94 ~~~W~~~v~ 102 (994)
++.-..-++
T Consensus 145 k~sak~~~~ 153 (199)
T 3fyq_A 145 KESARVMVL 153 (199)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444333
No 25
>2l10_A Talin-1; helical bundle, cytoskeleton, focal adhesion, structu protein; NMR {Mus musculus}
Probab=92.51 E-value=1.6 Score=43.48 Aligned_cols=109 Identities=17% Similarity=0.233 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHhhhhHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHhhhhhh
Q psy5460 330 AKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLNITSK 409 (994)
Q Consensus 330 Ak~Ma~~m~~M~~ftrg~G~l~tk~dli~~Ak~iae~~~~l~~lar~iA~~c~D~~~k~~LL~~~e~I~~~~~QL~i~s~ 409 (994)
|.....-..++..-.|| +..+|=...+.|+..=.+|...+-..|.+|+|...|.+++..+..|-+-+-+| +..
T Consensus 47 A~~Ln~A~~~vv~aarg-----sp~~La~as~~f~~~~~~l~~ag~~mag~~~~~~~r~~iv~~L~~vs~~s~~L--L~~ 119 (158)
T 2l10_A 47 AAGLNQAATELVQASRG-----TPQDLARASGRFGQDFSTFLEAGVEMAGQAPSQEDRAQVVSNLKGISMSSSKL--LLA 119 (158)
T ss_dssp HHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHH--HHH
T ss_pred HHHHHHHHHHHHHHhhc-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHHHHHHHHHHHHHHHHHHH--HHH
Confidence 33333344455555675 67899999999999999999999999999999999999999888877777554 544
Q ss_pred cccccccccccchhccCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy5460 410 VKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKSSY 451 (994)
Q Consensus 410 vKa~~~~~g~e~~~s~~~~~~~lI~~AknLm~~V~~tv~~~~ 451 (994)
.|+-.-+.+.. .--..|-.+||.+..+|..+|..|.
T Consensus 120 ak~~~~dp~~p------n~~~~L~sAaR~VtesIN~Lv~~ct 155 (158)
T 2l10_A 120 AKALSTDPASP------NLKSQLAAAARAVTDSINQLITMCT 155 (158)
T ss_dssp HHHHHHCTTCH------HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhcCCCCCc------cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55544443321 1123678889999999999998774
No 26
>4f7g_B Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} PDB: 2kbb_A 2kgx_A
Probab=91.94 E-value=3.9 Score=42.75 Aligned_cols=172 Identities=11% Similarity=0.147 Sum_probs=112.6
Q ss_pred HHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy5460 35 KLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAAR---PRSKVAQENMDVFKEAWDSQVRVLTEAVDDI 111 (994)
Q Consensus 35 klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~---P~sk~A~Enle~l~~~W~~~v~~L~~avDdi 111 (994)
.=+..++|+.++=....+.+.+..|...+..+.-++=.|.+..... |.. .-.++.|-++-...+..|.+.++.+
T Consensus 9 ~~~~~~~lisaird~APGQ~eCd~AI~~in~~i~dLd~AsLaA~s~~L~~~~---~~s~~~~qeq~~~~~~eL~~~i~~l 85 (216)
T 4f7g_B 9 SGVDLGTENLYFQSKAPGQLECETAIAALNSCLRDLDQASLAAVSQQLAPRE---GISQEALHTQMLTAVQEISHLIEPL 85 (216)
T ss_dssp ---------------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC---SSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC---CccHHHHHHHHHHHHHHHHHhhhHH
Confidence 3467889998887777788889999999998888888888777654 322 1223444444444444444444333
Q ss_pred cChHHHHHHhHHHHHHHHHHHHHHHhcCChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccchHHHHHHHHHHHHhhch
Q psy5460 112 TTIDDFLAVSENHILEDVNKCVLALQEGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKVLREQVMP 191 (994)
Q Consensus 112 td~~dFL~vSe~~I~~d~~~c~~Ai~~~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p 191 (994)
.. -..++++.+-..+..+..-....+..++.-+..+-|..-...+++..+-|-+..+-
T Consensus 86 ~~----------------------AAk~~~e~LG~av~~~a~~~epLv~aa~gaAS~t~ds~~Q~~lLdq~Ktv~es~lq 143 (216)
T 4f7g_B 86 AS----------------------AARAEASQLGHKVSQMAQYFEPLTLAAVGAASKTLSHPQQMALLDQTKTLAESALQ 143 (216)
T ss_dssp HH----------------------HHHHCHHHHHHHHHHHHHTHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HH----------------------hhhcCHHHHhHHHHHHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHH
Confidence 31 23456777777788888888888888888888888888888899999999888877
Q ss_pred hhHhHHHHHHHHhhcCCC-CchhhhHHHHhHHHHHHHHHHHHHHHh
Q psy5460 192 NFATRVEVAVDALSTTPP-KEVDENEFIDASRLVYDGVREIRRAVL 236 (994)
Q Consensus 192 ~v~~av~~a~~~l~~np~-~~~~~~~f~da~~~l~~~V~~vr~av~ 236 (994)
++.. | |.-..||. ....+....+++..+.++|.++...|.
T Consensus 144 lv~A----a-K~agGNPk~a~~~H~~l~eaa~~l~eai~d~~~tl~ 184 (216)
T 4f7g_B 144 LLYT----A-KEAGGNPKQAAHTQEALEEAVQMMTEAVEDLTTTLN 184 (216)
T ss_dssp HHHH----H-HHHCSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH----H-HhcCCCCchHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 7652 2 33468898 666688899999999999999877664
No 27
>1u89_A Talin 1, talin; 4-helix bundle, LEFT-handed, structural protein; NMR {Mus musculus} SCOP: a.216.1.1
Probab=90.67 E-value=0.89 Score=44.35 Aligned_cols=69 Identities=22% Similarity=0.268 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChH
Q psy5460 17 GNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKV 85 (994)
Q Consensus 17 G~ee~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~ 85 (994)
||.++.-.-+..+-.++..|++..+.-+....|++..+.+..+++.|-.-+..+|.|++.+..||+|..
T Consensus 67 gd~~eMvrqak~Laqat~~LV~~iK~eAe~~~D~~~q~rLL~AAk~lAdATa~mVeAAk~~a~nP~~~~ 135 (139)
T 1u89_A 67 GDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAHPDSEE 135 (139)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 566666667888888999999988888888899999999999999999999999999999999999854
No 28
>2l7n_A Talin-1; integrin, bundle, focal adhesion, structural protein; NMR {Mus musculus}
Probab=90.57 E-value=1.8 Score=43.61 Aligned_cols=96 Identities=19% Similarity=0.216 Sum_probs=77.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHH
Q psy5460 7 ILVLIEAARSGNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVA 86 (994)
Q Consensus 7 L~~L~eAa~~G~ee~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A 86 (994)
+.+|.-|+..||+.-.-..+..-..-...+...++-|++...|+...+.|..++.++-.=.-++|..+|..+.+|+++..
T Consensus 63 ~aQLltaa~qgne~y~g~aar~~A~aL~~lt~avrgvaatt~d~~~q~~ll~~a~~V~~~s~~Li~ear~~~~~p~d~~~ 142 (168)
T 2l7n_A 63 IAKLLGEIAQGNENYAGIAARDVAGGLRSLAQAARGVAALTSDPAVQAIVLDTASDVLDKASSLIEEAKKASGHPGDPES 142 (168)
T ss_dssp HHHHTSSCCBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTBSSSCHHH
T ss_pred HHHHHHHHHcCcHhhhhHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH
Confidence 45666677789998555555777777888888899999999999988888888888777788999999999999999888
Q ss_pred HHHHHHHHHHHHHHHH
Q psy5460 87 QENMDVFKEAWDSQVR 102 (994)
Q Consensus 87 ~Enle~l~~~W~~~v~ 102 (994)
+..|...-+.-...+.
T Consensus 143 ~~~L~~~ak~vs~aL~ 158 (168)
T 2l7n_A 143 QQRLAQVAKAVTQALN 158 (168)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8877777666555543
No 29
>2b0h_A Talin-1; vinculin, helical bundle, VBS, structural protein; NMR {Mus musculus} SCOP: a.24.9.2
Probab=90.16 E-value=4.5 Score=39.37 Aligned_cols=93 Identities=13% Similarity=0.157 Sum_probs=79.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy5460 16 SGNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKE 95 (994)
Q Consensus 16 ~G~ee~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~ 95 (994)
..|.+++-..+..+.++-..|..-++.+++..++++....|+.+...|-.=|-.+|..+..+-.+|+|..++.-+..=.+
T Consensus 40 ~~~p~eL~~la~~lt~~Y~~La~~~~~A~~~~~~~~v~~~Ir~~Vq~LG~ac~~lV~~ag~~q~~p~d~~~q~eL~~~aR 119 (137)
T 2b0h_A 40 NTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHGCSALVTKAGALQCSPSDVYTKKELIECAR 119 (137)
T ss_dssp TTCSSTHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhHHHHHHHHHHhhccCCcccHHHHHHHHHHHH
Confidence 35677888889999999999999999999999999999999998888877799999999999999999887776666666
Q ss_pred HHHHHHHHHHHHH
Q psy5460 96 AWDSQVRVLTEAV 108 (994)
Q Consensus 96 ~W~~~v~~L~~av 108 (994)
.-.++|.++..++
T Consensus 120 ~VsEkVs~vLAAL 132 (137)
T 2b0h_A 120 RVSEKVSHVLAAL 132 (137)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666777666654
No 30
>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}
Probab=89.60 E-value=4.3 Score=40.70 Aligned_cols=92 Identities=13% Similarity=0.156 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q psy5460 17 GNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKEA 96 (994)
Q Consensus 17 G~ee~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~~ 96 (994)
.|.+++-..+..+.++-..|..-++.++..++|++....|+.+...|-.=|-.+|..+..+-.+|+|..++.-+..=.+.
T Consensus 69 ~~p~eL~~la~~it~~y~~La~~~~~A~~t~~~~~i~~~Ik~~Vq~LG~sc~~lV~~ag~~q~~p~d~~~q~eL~~~aR~ 148 (165)
T 2kvp_A 69 TSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHGCSALVTKAGALQCSPSDVYTKKELIECARR 148 (165)
T ss_dssp HCGGGHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhHHHHHHHHHHhhccCCCccHHHHHHHHHHHHH
Confidence 46777888899999999999999999999999999999999999888888999999999999999988766555555555
Q ss_pred HHHHHHHHHHHH
Q psy5460 97 WDSQVRVLTEAV 108 (994)
Q Consensus 97 W~~~v~~L~~av 108 (994)
-.++|.++..++
T Consensus 149 VsekVs~vLaAL 160 (165)
T 2kvp_A 149 VSEKVSHVLAAL 160 (165)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 556666666554
No 31
>3fyq_A CG6831-PA (talin); 5-helix bundle, cell adhesion; 1.95A {Drosophila melanogaster}
Probab=89.30 E-value=9.5 Score=39.17 Aligned_cols=76 Identities=25% Similarity=0.368 Sum_probs=63.5
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHh-cc-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q psy5460 488 ILVLIEAARSGNEKEVEKAAENFADHANKLVEVANLAC-SM-SNNEDGVKMVRYAASSIASLYTQVINAARILAARPRS 564 (994)
Q Consensus 488 L~~L~~Aa~~Gd~e~~~~~a~~F~eha~~l~evA~lv~-~~-s~ne~~~~~i~~aa~~le~L~PQVI~Aar~l~~~P~s 564 (994)
.+.|+.++ .|..+.+...++++.+...+|.++.++.. .+ +.|++.+..+..+..-|..-..++|++.+.-.-+|.+
T Consensus 60 tk~LV~~a-~~tQe~LA~aa~~~v~~i~~La~~vK~gAAsl~s~dp~tQv~LLna~kdVa~aL~~Li~atK~a~g~~~~ 137 (199)
T 3fyq_A 60 TKVLVTGA-AGTQDQLANAAQNAVSTITQLAEAVKRGACSLGSTQPDSQVMVINAVKDVASALGDLINCTKLASGKSIN 137 (199)
T ss_dssp HHHHHHHT-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHcc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Confidence 36777666 77999999999999999999999999985 33 4699999999999999999999999999999988844
No 32
>2l10_A Talin-1; helical bundle, cytoskeleton, focal adhesion, structu protein; NMR {Mus musculus}
Probab=89.10 E-value=11 Score=37.61 Aligned_cols=90 Identities=14% Similarity=0.288 Sum_probs=69.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q psy5460 16 SGNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKE 95 (994)
Q Consensus 16 ~G~ee~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~ 95 (994)
.|....+...++.|..-=+.|+.++--++..+.|+.....+-..-..+..=.-++..+++.+..+|.+.-++..|
T Consensus 62 rgsp~~La~as~~f~~~~~~l~~ag~~mag~~~~~~~r~~iv~~L~~vs~~s~~LL~~ak~~~~dp~~pn~~~~L----- 136 (158)
T 2l10_A 62 RGTPQDLARASGRFGQDFSTFLEAGVEMAGQAPSQEDRAQVVSNLKGISMSSSKLLLAAKALSTDPASPNLKSQL----- 136 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH-----
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHH-----
Confidence 588889999999999999999999998888888887766666556666666678889999999999997555544
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy5460 96 AWDSQVRVLTEAVDDIT 112 (994)
Q Consensus 96 ~W~~~v~~L~~avDdit 112 (994)
....+-+++.+++++
T Consensus 137 --~sAaR~VtesIN~Lv 151 (158)
T 2l10_A 137 --AAAARAVTDSINQLI 151 (158)
T ss_dssp --HHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHH
Confidence 444555555555554
No 33
>2jsw_A Talin-1; C-terminal actin binding site, ABS3, thatch domain, cytoskeleton, phosphorylation, structural protein, actin- binding protein; NMR {Mus musculus}
Probab=84.15 E-value=6.2 Score=40.39 Aligned_cols=59 Identities=25% Similarity=0.372 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHH-HhccCCCcchHHHHHHHHHhhhhhhhHhhhhhhcccccc
Q psy5460 758 TMDVINAAKKISEAGTNLDKLTRQ-IADQCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQ 820 (994)
Q Consensus 758 t~dli~~Ak~iae~~~~l~~~a~~-~a~~c~D~~~k~~Ll~~~e~i~t~~~QLki~s~vka~~~ 820 (994)
+.+||.+||.++...+.|..-|.. +..+|. .+.|......|..-+.||=.-|+||++..
T Consensus 97 tEGLiSAAKaVa~at~~LveaAd~vv~g~~~----~E~LIvaa~eVAAsTaQLvaAsrVKa~~~ 156 (189)
T 2jsw_A 97 SQGLISAARMVAAATNNLCEAANAAVQGHAS----QEKLISSAKQVAASTAQLLVACKVKADQD 156 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC----HHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC----HHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 689999999999999999999844 444443 48888888888888888888888887533
No 34
>2jsw_A Talin-1; C-terminal actin binding site, ABS3, thatch domain, cytoskeleton, phosphorylation, structural protein, actin- binding protein; NMR {Mus musculus}
Probab=83.11 E-value=5.1 Score=41.03 Aligned_cols=88 Identities=24% Similarity=0.234 Sum_probs=65.3
Q ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccccccccccchhccCCchHH
Q psy5460 352 TTMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQNISGELIVSGLDSATS 431 (994)
Q Consensus 352 tk~dli~~Ak~iae~~~~l~~lar~iA~~c~D~~~k~~LL~~~e~I~~~~~QL~i~s~vKa~~~~~g~e~~~s~~~~~~~ 431 (994)
=++.||.+||.++...+.|..-|..+-... ++ -..|..-...|..-..||-..++||++.... .-..
T Consensus 96 WtEGLiSAAKaVa~at~~LveaAd~vv~g~-~~--~E~LIvaa~eVAAsTaQLvaAsrVKa~~~S~----------~q~~ 162 (189)
T 2jsw_A 96 WSQGLISAARMVAAATNNLCEAANAAVQGH-AS--QEKLISSAKQVAASTAQLLVACKVKADQDSE----------AMKR 162 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CC--HHHHHHHHHHHHHHHHHHHHHHTTTSCTTSH----------HHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CC--HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCH----------HHHH
Confidence 367899999999999999999996554443 22 3558888899999999999999999866431 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy5460 432 LIQAAKNLMNAVVLTVKSSYV 452 (994)
Q Consensus 432 lI~~AknLm~~V~~tv~~~~~ 452 (994)
|-...+....+...+|+.+..
T Consensus 163 L~~Ask~V~~a~~~LV~~v~~ 183 (189)
T 2jsw_A 163 LQAAGNAVKRASDNLVKAAQK 183 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 666677766666666666544
No 35
>2b0h_A Talin-1; vinculin, helical bundle, VBS, structural protein; NMR {Mus musculus} SCOP: a.24.9.2
Probab=78.36 E-value=39 Score=32.81 Aligned_cols=95 Identities=16% Similarity=0.177 Sum_probs=81.3
Q ss_pred hcCChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhhcCCCCchhhhH
Q psy5460 137 QEGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKVLREQVMPNFATRVEVAVDALSTTPPKEVDENE 216 (994)
Q Consensus 137 ~~~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~~np~~~~~~~~ 216 (994)
...+|+.+-.-+..|...=.++++.++.-+...+++....+|+..+..|-.+-+-+++.+ ..+..+|.|.....+
T Consensus 39 s~~~p~eL~~la~~lt~~Y~~La~~~~~A~~~~~~~~v~~~Ir~~Vq~LG~ac~~lV~~a-----g~~q~~p~d~~~q~e 113 (137)
T 2b0h_A 39 SNTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHGCSALVTKA-----GALQCSPSDVYTKKE 113 (137)
T ss_dssp TTTCSSTHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHCTTCHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhHHHHHHHHHH-----hhccCCcccHHHHHH
Confidence 367999999999999999999999999999999999999999999999976665665522 244568999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHh
Q psy5460 217 FIDASRLVYDGVREIRRAVL 236 (994)
Q Consensus 217 f~da~~~l~~~V~~vr~av~ 236 (994)
+.+.++.+-+.|..|=-++.
T Consensus 114 L~~~aR~VsEkVs~vLAALq 133 (137)
T 2b0h_A 114 LIECARRVSEKVSHVLAALQ 133 (137)
T ss_dssp HHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999976664
No 36
>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}
Probab=78.21 E-value=48 Score=33.19 Aligned_cols=94 Identities=17% Similarity=0.189 Sum_probs=80.6
Q ss_pred cCChhHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhhcCCCCchhhhHH
Q psy5460 138 EGDADILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKVLREQVMPNFATRVEVAVDALSTTPPKEVDENEF 217 (994)
Q Consensus 138 ~~d~~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~~np~~~~~~~~f 217 (994)
..+|+.+-.-+..|...=..+++-++.-+...+++....+++..++.|-.+-.-+++. + ..+..+|.|.....++
T Consensus 68 ~~~p~eL~~la~~it~~y~~La~~~~~A~~t~~~~~i~~~Ik~~Vq~LG~sc~~lV~~----a-g~~q~~p~d~~~q~eL 142 (165)
T 2kvp_A 68 NTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHGCSALVTK----A-GALQCSPSDVYTKKEL 142 (165)
T ss_dssp HHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHH----H-HHHHHCTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhHHHHHHHHH----H-hhccCCCccHHHHHHH
Confidence 4589999999999999999999999999999999999999999999996666566552 2 3456789999999999
Q ss_pred HHhHHHHHHHHHHHHHHHh
Q psy5460 218 IDASRLVYDGVREIRRAVL 236 (994)
Q Consensus 218 ~da~~~l~~~V~~vr~av~ 236 (994)
.+.++.+.+.|..|=-|+.
T Consensus 143 ~~~aR~VsekVs~vLaALq 161 (165)
T 2kvp_A 143 IECARRVSEKVSHVLAALQ 161 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999976663
No 37
>4f7g_B Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} PDB: 2kbb_A 2kgx_A
Probab=78.02 E-value=21 Score=37.31 Aligned_cols=95 Identities=20% Similarity=0.205 Sum_probs=77.7
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCC-ChHHHHHHHHHH
Q psy5460 16 SGNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPR-SKVAQENMDVFK 94 (994)
Q Consensus 16 ~G~ee~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~-sk~A~Enle~l~ 94 (994)
.|+-+.+-..+..|....+.|+..+.-+|+...|.+....+...++.|-.=.-|++.+++.--.||. ..-+ .
T Consensus 90 k~~~e~LG~av~~~a~~~epLv~aa~gaAS~t~ds~~Q~~lLdq~Ktv~es~lqlv~AaK~agGNPk~a~~~-------H 162 (216)
T 4f7g_B 90 RAEASQLGHKVSQMAQYFEPLTLAAVGAASKTLSHPQQMALLDQTKTLAESALQLLYTAKEAGGNPKQAAHT-------Q 162 (216)
T ss_dssp HHCHHHHHHHHHHHHHTHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCTTCCHHH-------H
T ss_pred hcCHHHHhHHHHHHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHh-------h
Confidence 5788889999999999999999999999999999988887778888888778999999999999996 4333 3
Q ss_pred HHHHHHHHHHHHHHhhhcChHHH
Q psy5460 95 EAWDSQVRVLTEAVDDITTIDDF 117 (994)
Q Consensus 95 ~~W~~~v~~L~~avDditd~~dF 117 (994)
..-.+.++.|+++|++...+-++
T Consensus 163 ~~l~eaa~~l~eai~d~~~tl~~ 185 (216)
T 4f7g_B 163 EALEEAVQMMTEAVEDLTTTLNE 185 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Confidence 33456667778888887766665
No 38
>1r0d_A HIP1-related, huntingtin interacting protein 12, HIP 12; endocytosis, actin-binding, structural genomics, PSI, protein structure initiative; 1.90A {Homo sapiens} SCOP: a.216.1.1
Probab=76.47 E-value=19 Score=37.21 Aligned_cols=109 Identities=19% Similarity=0.201 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHhhhhHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHhh
Q psy5460 326 IIVLAKHMCMIMMEMTDFTRGRGPLKTTMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLN 405 (994)
Q Consensus 326 IV~~Ak~Ma~~m~~M~~ftrg~G~l~tk~dli~~Ak~iae~~~~l~~lar~iA~~c~D~~~k~~LL~~~e~I~~~~~QL~ 405 (994)
||...+-.+ ....|.+..|. =++.||.+||.++...+.|+.-|..+-..- ++ ..+|.-....|..-.-||-
T Consensus 83 iV~~Gr~~~----s~~~fy~kn~~--WtEGLISAAkaVa~at~~LveaAd~vv~g~-~~--~E~LIvaa~eVAAsTAQLv 153 (206)
T 1r0d_A 83 IVESGRGAA----TQQEFYAKNSR--WTEGLISASKAVGWGATQLVEAADKVVLHT-GK--YEELIVCSHEIAASTAQLV 153 (206)
T ss_dssp HHHHHCTTS----CHHHHHHHTHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CC--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCC----CCccccccCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CC--HHHHHHHHHHHHHHHHHHH
Confidence 555544333 12344444442 468899999999999999999998665544 33 3458888899999999999
Q ss_pred hhhhcccccccccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5460 406 ITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKSSYVA 453 (994)
Q Consensus 406 i~s~vKa~~~~~g~e~~~s~~~~~~~lI~~AknLm~~V~~tv~~~~~a 453 (994)
.-|+||++... .+-..|-...+....+...+|+.+..+
T Consensus 154 aAsrVKa~~~S----------~~~~~L~~Ask~V~~A~~~lV~avk~~ 191 (206)
T 1r0d_A 154 AASKVKANKHS----------PHLSRLQECSRTVNERAANVVASTKSG 191 (206)
T ss_dssp HHHHTTCCSCT----------TTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCCCC----------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999986643 223346666666666666666655443
No 39
>2l7n_A Talin-1; integrin, bundle, focal adhesion, structural protein; NMR {Mus musculus}
Probab=75.78 E-value=19 Score=36.21 Aligned_cols=84 Identities=20% Similarity=0.242 Sum_probs=68.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhH
Q psy5460 488 ILVLIEAARSGNEKEVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAARPRSKVA 567 (994)
Q Consensus 488 L~~L~~Aa~~Gd~e~~~~~a~~F~eha~~l~evA~lv~~~s~ne~~~~~i~~aa~~le~L~PQVI~Aar~l~~~P~sk~A 567 (994)
+.+|..|+..||+.-....+..-..-...+...++-|+....|+...+.+...+..+=.=.-++|..+|..+.+|.++..
T Consensus 63 ~aQLltaa~qgne~y~g~aar~~A~aL~~lt~avrgvaatt~d~~~q~~ll~~a~~V~~~s~~Li~ear~~~~~p~d~~~ 142 (168)
T 2l7n_A 63 IAKLLGEIAQGNENYAGIAARDVAGGLRSLAQAARGVAALTSDPAVQAIVLDTASDVLDKASSLIEEAKKASGHPGDPES 142 (168)
T ss_dssp HHHHTSSCCBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTBSSSCHHH
T ss_pred HHHHHHHHHcCcHhhhhHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH
Confidence 46777788889988666666777777777777888888889999998888888888888888899999999999999755
Q ss_pred hhhh
Q psy5460 568 QENM 571 (994)
Q Consensus 568 ~en~ 571 (994)
+.-|
T Consensus 143 ~~~L 146 (168)
T 2l7n_A 143 QQRL 146 (168)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5433
No 40
>1syq_B Talin 1; cytoskeleton, vinculin, cell adhesion; 2.42A {Homo sapiens}
Probab=64.43 E-value=4.7 Score=27.16 Aligned_cols=24 Identities=46% Similarity=0.443 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhc
Q psy5460 869 LIQAAKNLMNAVVLTVKSSYVAST 892 (994)
Q Consensus 869 li~~a~nlm~~v~~~v~~~~~as~ 892 (994)
|.|.||+|-.+|.+.+|++.-||.
T Consensus 2 llqaakglagavsellrsaqpasa 25 (26)
T 1syq_B 2 LLQAAKGLAGAVSELLRSAQPASA 25 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCTTC
T ss_pred HhHHHhHhHHHHHHHHHhcCcccc
Confidence 689999999999999999876663
No 41
>1r0d_A HIP1-related, huntingtin interacting protein 12, HIP 12; endocytosis, actin-binding, structural genomics, PSI, protein structure initiative; 1.90A {Homo sapiens} SCOP: a.216.1.1
Probab=64.16 E-value=47 Score=34.34 Aligned_cols=61 Identities=26% Similarity=0.271 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHhccCCCcchHHHHHHHHHhhhhhhhHhhhhhhccccccC
Q psy5460 758 TMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQRIALYCHQLNITSKVKADVQK 821 (994)
Q Consensus 758 t~dli~~Ak~iae~~~~l~~~a~~~a~~c~D~~~k~~Ll~~~e~i~t~~~QLki~s~vka~~~~ 821 (994)
|.+||.+||.++...+.|..-|..+-..= ++ ..+|......|.--.-||=.-|+||++...
T Consensus 104 tEGLISAAkaVa~at~~LveaAd~vv~g~-~~--~E~LIvaa~eVAAsTAQLvaAsrVKa~~~S 164 (206)
T 1r0d_A 104 TEGLISASKAVGWGATQLVEAADKVVLHT-GK--YEELIVCSHEIAASTAQLVAASKVKANKHS 164 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CC--HHHHHHHHHHHHHHHHHHHHHHHTTCCSCT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CC--HHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 68999999999999999999887655442 33 577888999999999999999999987544
No 42
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=61.68 E-value=1.5e+02 Score=30.87 Aligned_cols=98 Identities=9% Similarity=0.071 Sum_probs=74.5
Q ss_pred HHHhcCCh-hHHHhHHHHHHHHHhHHHHHHHhhhhcCCCccchHHHHHHHHHHHHhhchhhHhHHHHHHHHhhcCCCCch
Q psy5460 134 LALQEGDA-DILDRTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKVLREQVMPNFATRVEVAVDALSTTPPKEV 212 (994)
Q Consensus 134 ~Ai~~~d~-~~~~~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~av~~a~~~l~~np~~~~ 212 (994)
..+.+|+| +.|..+.+.|.=-|++.+-+...=-.+...+.-|++|.....+|-+.+--.+. +. |..+.+-+++.
T Consensus 124 ~sv~~nQPP~iFVahsK~VIlsAHKLVfIGDTL~r~~~~~dvr~~Vl~~sn~Lc~~LK~~Vl-AT----K~AAl~YPS~~ 198 (229)
T 3t6g_B 124 TAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTHYSNLLCDLLRGIVA-TT----KAAALQYPSPS 198 (229)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHH-HH----HHHHHTCSCHH
T ss_pred HHHhcCCCchhhHhcCCEEEEEeeeeeeecchHHHhhccHHHHHHHHHHHHHHHHHHHHHHH-HH----HHHHHhCCCHH
Confidence 44555555 88899998888888888877776667788889999999999999765533333 22 33356677888
Q ss_pred hhhHHHHhHHHHHHHHHHHHHHHh
Q psy5460 213 DENEFIDASRLVYDGVREIRRAVL 236 (994)
Q Consensus 213 ~~~~f~da~~~l~~~V~~vr~av~ 236 (994)
+.++..+....|-...+++|..+.
T Consensus 199 AlQeMvd~v~eLs~~Aqqfr~~L~ 222 (229)
T 3t6g_B 199 AAQDMVERVKELGHSTQQFRRVLG 222 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999887763
No 43
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=58.60 E-value=1.7e+02 Score=30.52 Aligned_cols=103 Identities=13% Similarity=0.136 Sum_probs=70.7
Q ss_pred HHHHHHhcCCHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHhC-CCChHH
Q psy5460 9 VLIEAARSGNEK-EVEKAAENFADHANKLVEVANLACSMSNNEDGVKMVRYAASSIASLYTQVINAARILAAR-PRSKVA 86 (994)
Q Consensus 9 ~L~eAa~~G~ee-~~~~~a~~F~eha~klvevA~lv~a~s~d~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~-P~sk~A 86 (994)
.|...+..|-.. -|-.+.+---=-+.||+.++-.+|.-...++....|..+.++|..+=-.++.|.+.-+.+ | |..|
T Consensus 121 aF~~sv~~nQPP~iFVahsK~VIlsAHKLVfIGDTL~r~~~~~dvr~~Vl~~sn~Lc~~LK~~VlATK~AAl~YP-S~~A 199 (229)
T 3t6g_B 121 AFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTHYSNLLCDLLRGIVATTKAAALQYP-SPSA 199 (229)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS-CHHH
T ss_pred HHHHHHhcCCCchhhHhcCCEEEEEeeeeeeecchHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHH
Confidence 344444444432 344444444444556666666677777788999999999999988888888888776655 6 5677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy5460 87 QENMDVFKEAWDSQVRVLTEAVDDIT 112 (994)
Q Consensus 87 ~Enle~l~~~W~~~v~~L~~avDdit 112 (994)
-..|-.--.........++.++.++.
T Consensus 200 lQeMvd~v~eLs~~Aqqfr~~L~q~a 225 (229)
T 3t6g_B 200 AQDMVERVKELGHSTQQFRRVLGQLA 225 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777887777776654
No 44
>1t01_B Talin 1; five helix bundle, cell adhesion, structural protein; 2.06A {Mus musculus}
Probab=51.20 E-value=15 Score=24.83 Aligned_cols=21 Identities=43% Similarity=0.458 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q psy5460 868 SLIQAAKNLMNAVVLTVKSSY 888 (994)
Q Consensus 868 ~li~~a~nlm~~v~~~v~~~~ 888 (994)
.|.|.||+|..+|.+.+|++.
T Consensus 3 pllqaakglagavsellrsaq 23 (26)
T 1t01_B 3 PLLQAAKGLAGAVSELLRSAQ 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHhHHHHHHHHHhcC
Confidence 588999999999999999864
No 45
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypept carboxypeptidase, hydrolase; 2.10A {Trypanosoma cruzi}
Probab=36.86 E-value=5.7e+02 Score=29.85 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=68.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHHHHHHHHHHHHHHHhcCChhHHHhHHHHHHHHHhHHHHHH
Q psy5460 83 SKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSENHILEDVNKCVLALQEGDADILDRTAGAIRGRSARVANVV 162 (994)
Q Consensus 83 sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~~I~~d~~~c~~Ai~~~d~~~~~~~a~~I~gra~RV~~Va 162 (994)
+.+-+.++..+++.|..... + |.|++..-...--+--.-=..|=.++|...|..+=..|-...+++...-
T Consensus 77 ~~~~~a~lr~~~r~~~~~~~---------i-P~elv~~~~~~~s~~~~~W~~Ar~~nDf~~F~P~L~~vv~l~re~A~~~ 146 (505)
T 3dwc_A 77 EKLQRANLREMRRAWELENL---------L-PEEFVERKTVLTTKAHQVWKTCREKNDFAGFLPTLKELIALFREEGKLR 146 (505)
T ss_dssp CHHHHHHHHHHHHHHHHHHS---------S-CHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhC---------C-CHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 44567889999999977553 2 3333322221111111122334457888999888777777777776553
Q ss_pred H---------hhhhcCCCccchHHHHHHHHHHHHhhchhhHh
Q psy5460 163 A---------AEMDNYEPGIYTERVLEAIKVLREQVMPNFAT 195 (994)
Q Consensus 163 k---------~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~~ 195 (994)
. .=+|.+|++.-...|......|+..+.|.+..
T Consensus 147 ~~~~~~~pYDaLLd~yEpg~t~~~ld~iF~~lk~~L~~Ll~~ 188 (505)
T 3dwc_A 147 AGNSGKHPYEALVDIYEPGMTLQRLDEIFGNVRSWLPELLKE 188 (505)
T ss_dssp HTTSCCCHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCcHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2 34678999999999999999999998777653
No 46
>1u6h_B Talin; protein-protein complex, cell adhesion; 2.38A {Gallus gallus}
Probab=36.38 E-value=22 Score=25.93 Aligned_cols=25 Identities=32% Similarity=0.299 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhh
Q psy5460 867 TSLIQAAKNLMNAVVLTVKSSYVAS 891 (994)
Q Consensus 867 ~~li~~a~nlm~~v~~~v~~~~~as 891 (994)
.-|+++||+|+.++...|.+|..|.
T Consensus 6 ~rLl~aak~vaeata~mVeaak~~a 30 (31)
T 1u6h_B 6 RKLLSAAKILADATAKMVEAAKGAA 30 (31)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4899999999999999999987653
No 47
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis} SCOP: d.92.1.0
Probab=35.35 E-value=5.1e+02 Score=30.19 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=59.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHHHHHHHHHHHHHHHhcCChhHHHhHHHHHHHHHhHHHHHH
Q psy5460 83 SKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSENHILEDVNKCVLALQEGDADILDRTAGAIRGRSARVANVV 162 (994)
Q Consensus 83 sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~~I~~d~~~c~~Ai~~~d~~~~~~~a~~I~gra~RV~~Va 162 (994)
+..-+.++..+++.|..... + |.|++..-...--+--.-=..|=.++|...|..+=..|-...+++...-
T Consensus 78 ~~~~~a~lr~~~r~~~~~~~---------i-P~~lv~~~~~~~s~~~~~W~~Ar~~nDf~~F~P~L~~vv~l~re~A~~~ 147 (501)
T 3hq2_A 78 SEDTKKAVELAKKEYEENKK---------I-PEAEYKEYVILCSKAETAWEEAKGKSDFSLFSPYLEQLIEFNKRFITYW 147 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---------S-CHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhC---------C-CHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 45667888888999876443 2 2233221111111111112334456788888888777777777765542
Q ss_pred -------HhhhhcCCCccchHHHHHHHHHHHHhhchhhH
Q psy5460 163 -------AAEMDNYEPGIYTERVLEAIKVLREQVMPNFA 194 (994)
Q Consensus 163 -------k~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~ 194 (994)
..=+|.+|++.-...|......|+..+.|.+.
T Consensus 148 ~~~~~pYDaLLd~yEpg~t~~~ld~iF~~Lk~~l~~Li~ 186 (501)
T 3hq2_A 148 GYQEHPYDALLDLFEPGVTVKVLDQLFAELKEAIIPLVK 186 (501)
T ss_dssp CCSSCTTHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23355667777777777777777766655543
No 48
>2olt_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Shewanella oneidensis} PDB: 2iiu_A*
Probab=28.90 E-value=4.6e+02 Score=26.42 Aligned_cols=59 Identities=17% Similarity=0.151 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-----CCC----hhHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCh
Q psy5460 26 AENFADHANKLVEVANLACSM-----SNN----EDGVKMVRYAASSIASLYTQVINAARILAARPRSK 84 (994)
Q Consensus 26 a~~F~eha~klvevA~lv~a~-----s~d----~~~vk~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk 84 (994)
...|.+|++.+.+.|.++..+ .+| ++..+.|.......+.|.-.+...-...+--|-+.
T Consensus 16 f~~l~~~a~~~~~~a~~L~~~~~~~~~~d~~~~~~~~~~i~~~E~~aD~l~~~I~~~L~~~~~~P~dr 83 (227)
T 2olt_A 16 IKPLQEHMDKVYDCASLLVPFFEATITGNWDDAVQIRKQISLAEKQGDSLKREIRLTLPSGLFMPVER 83 (227)
T ss_dssp THHHHHHHHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCSCSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCH
Confidence 556888999888888887552 223 23344555555566666666665544444457775
No 49
>3ajm_A Programmed cell death protein 10; adaptor protein, dimerization, four-helix bundle, apoptosis; HET: 4IP; 2.30A {Homo sapiens} PDB: 3l8i_A 3rqe_A 3rqf_A 3rqg_A 3l8j_A
Probab=23.85 E-value=3.4e+02 Score=28.09 Aligned_cols=86 Identities=13% Similarity=0.132 Sum_probs=56.0
Q ss_pred CCCHHHHHHHHHHHHHhhhhHHHHHHHHhhhCCCchhHHHHHHHHHH----HHHHHHHhhhhhhcccccccccccchhcc
Q psy5460 350 LKTTMDVINAAKKISEAGTNLDKLTRQIADQCPESSTKKDLLAYLQR----IALYCHQLNITSKVKADVQNISGELIVSG 425 (994)
Q Consensus 350 l~tk~dli~~Ak~iae~~~~l~~lar~iA~~c~D~~~k~~LL~~~e~----I~~~~~QL~i~s~vKa~~~~~g~e~~~s~ 425 (994)
+.+..-|+.+-|+||++..+|..-...+...+++. .|+.|-+.=-. .+.++.-|+-.=| ..- ....|
T Consensus 114 I~dR~~FL~tIKeIAsaIKklLDAvn~v~~~~~~~-~k~~le~~KreFVkySKrFS~TLKeYFk--d~~----~~~Vf-- 184 (213)
T 3ajm_A 114 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQ-NRRALEHQKKEFVKYSKSFSDTLKTYFK--DGK----AINVF-- 184 (213)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCC----HHHHH--
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-HHHHHHHHHHHHHHHhhHhhHHHHHHHh--cCC----cceeh--
Confidence 45788899999999999999999999999999988 34444322111 2234444543322 111 12233
Q ss_pred CCchHHHHHHHHHHHHHHHH
Q psy5460 426 LDSATSLIQAAKNLMNAVVL 445 (994)
Q Consensus 426 ~~~~~~lI~~AknLm~~V~~ 445 (994)
-++..||..|-.+|..|..
T Consensus 185 -~SAn~LI~QTn~il~Tvk~ 203 (213)
T 3ajm_A 185 -VSANRLIHQTNLILQTFKT 203 (213)
T ss_dssp -HHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 3577889998888866554
No 50
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase; 2.10A {Thermus thermophilus HB27} SCOP: d.92.1.0 PDB: 1wgz_A
Probab=23.32 E-value=7.7e+02 Score=28.74 Aligned_cols=98 Identities=15% Similarity=0.157 Sum_probs=58.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHHHHHHHHHHHHHH----HhcCChhHHHhHHHHHHHHHhHH
Q psy5460 83 SKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSENHILEDVNKCVLA----LQEGDADILDRTAGAIRGRSARV 158 (994)
Q Consensus 83 sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~~I~~d~~~c~~A----i~~~d~~~~~~~a~~I~gra~RV 158 (994)
+..-+.++..+++.|...... |.|++..-. +-..+|..+ =.++|...|..+=..|-...+++
T Consensus 80 ~~~~~a~lr~~~r~~~~~~~i----------P~~lv~~~~----~~~s~~~~~W~~Ar~~~Df~~F~P~L~~vv~l~re~ 145 (509)
T 3hoa_A 80 LSDAAVNVREWRQAYERARAI----------PERLAVELA----QAESEAESFWEEARPRDDWRGFLPYLKRVYALTKEK 145 (509)
T ss_dssp TSHHHHHHHHHHHHHHHHHHS----------CHHHHHHHH----HHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhCC----------CHHHHHHHH----HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 456788999999999876542 333332211 122344433 34567788877777666666666
Q ss_pred HHHHH----------------hhhhcCCCccchHHHHHHHHHHHHhhchhhH
Q psy5460 159 ANVVA----------------AEMDNYEPGIYTERVLEAIKVLREQVMPNFA 194 (994)
Q Consensus 159 ~~Vak----------------~e~dnsedp~y~~~V~~a~~~L~~~i~p~v~ 194 (994)
...-. .=+|.+|++.-...|......|+..+.|.+.
T Consensus 146 A~~~~~~~~~~~~~~~~~~YDaLLd~yEpg~t~~~ld~iF~~Lk~~l~~Ll~ 197 (509)
T 3hoa_A 146 AEVLFALPPAPGDPPYGELYDALLDGYEPGMRARELLPLFAELKEGLKGLLD 197 (509)
T ss_dssp HHHHHTSCCCTTSCCCCSHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCcccccccccCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 54422 2345666666667776666667666655533
No 51
>2yfa_A MCPS, methyl-accepting chemotaxis transducer; receptor, chemoreceptor; 1.80A {Pseudomonas putida} PDB: 2yfb_A
Probab=21.02 E-value=6.5e+02 Score=25.35 Aligned_cols=137 Identities=8% Similarity=0.005 Sum_probs=65.2
Q ss_pred hcCCChhHHH-HHHHHHHHHHhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcChHHHHHHhHH
Q psy5460 45 SMSNNEDGVK-MVRYAASSIASLYTQVINAARILAARPRSKVAQENMDVFKEAWDSQVRVLTEAVDDITTIDDFLAVSEN 123 (994)
Q Consensus 45 a~s~d~~~vk-~i~~aa~qLe~L~PQVi~Aar~L~~~P~sk~A~Enle~l~~~W~~~v~~L~~avDditd~~dFL~vSe~ 123 (994)
...+|++... ........+.. .+..+..++..|.+...-..+......|......+..+......+..=+.....
T Consensus 42 ~~~~d~~~~~~~~~~~l~~~~~----~l~~~~~~~~~~~~~~~l~~i~~~~~~Y~~~f~~~~~~~~~~~~~~~~l~~~~~ 117 (258)
T 2yfa_A 42 MIANGDDTAAANTLAKLDAFSK----QQAYLATTFKSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAI 117 (258)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHH----HHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHHHHHH----HHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555544 44433332222 223344444455544444555555555555555555555555444444444455
Q ss_pred HHHHHHHHHHHHHhcC--C-hhHHH--hHHHHHHHHHhHHHHHHHhhhhcCCCccchHHHHHHHHHHH
Q psy5460 124 HILEDVNKCVLALQEG--D-ADILD--RTAGAIRGRSARVANVVAAEMDNYEPGIYTERVLEAIKVLR 186 (994)
Q Consensus 124 ~I~~d~~~c~~Ai~~~--d-~~~~~--~~a~~I~gra~RV~~Vak~e~dnsedp~y~~~V~~a~~~L~ 186 (994)
.+...+......+... + +..++ ..++.+......+-..++.++- +.+|.|.+.+....+.+.
T Consensus 118 ~~~~~l~~l~~~~~~~~~~d~~~~~~~~~~~~l~~~ll~~R~~~~~fl~-~~~~~~~~~~~~~~~~~~ 184 (258)
T 2yfa_A 118 RADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIA-ENSSANEQAALRQLDAAL 184 (258)
T ss_dssp HHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHH
Confidence 5555555555555443 1 11121 2223333333333334455554 467888777766554443
Done!