RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5462
(182 letters)
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 139 bits (352), Expect = 2e-41
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
F D S++ +I + V+ IG V IL+NNAG+V +S + A D +IE+ +VN++
Sbjct: 82 VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVL 141
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
++ + FLP M +NN GHIV ++S A + + AY +SK+
Sbjct: 142 AHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA 187
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 111 bits (280), Expect = 3e-30
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 27 AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ + DV+ + K + V + G V IL NNAG+ + + + + ++ VNL
Sbjct: 61 VMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLH 120
Query: 86 SNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
+ V F+P M+E GH+V +S+AA AA + Y +K+ V
Sbjct: 121 GVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAV 172
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 110 bits (278), Expect = 3e-30
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A DV E+ +L + R +G VD++ +NAGIV + + + ++D++L
Sbjct: 82 AHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLW 141
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
+I V FLP +LE T GHI +S A L + Y +KYGV
Sbjct: 142 GSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGV 188
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 107 bits (270), Expect = 4e-29
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A Y + D ++ + +G +D+LI N S ++ H + + M+VN +
Sbjct: 80 AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFL 139
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S + + LP ML+ + G IV +SS+A A V+AY ASK+ +
Sbjct: 140 SYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL 184
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 104 bits (263), Expect = 4e-28
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ DV+ + + G DIL+NNAG ++ +++ D + + ++ +M
Sbjct: 59 VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVM 118
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ +++ R +P M G I+ +SI A+ Y +K +
Sbjct: 119 AAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAAL 164
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 103 bits (259), Expect = 1e-27
Identities = 20/105 (19%), Positives = 42/105 (40%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
V D ++ E+ +++ I N G + +L TD ++ ++ +
Sbjct: 58 IVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWA 117
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
RE ML + G I + A+L +A+ ++K+G+
Sbjct: 118 GFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGL 162
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 102 bits (256), Expect = 4e-27
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 26 VAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
V+ +FK DV+++ E+K+ + +K G +DIL+NNAGI S + RI+DVN+
Sbjct: 54 VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNV 113
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ M + +P ML G I+ I+S+ + A N +AY SK+ +
Sbjct: 114 NGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHAL 160
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 101 bits (253), Expect = 7e-27
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ D++D + +++ K G VDIL+N A + S+ D +IM++N++
Sbjct: 61 PIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVD-NFRKIMEINVI 119
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ +++ M G+I ++S AA + Y ++K+ +
Sbjct: 120 AQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFAL 165
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 101 bits (254), Expect = 8e-27
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A + DVS + + + + K G VD+L+NNAG + +V+ + +RIM VN+
Sbjct: 75 AFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVK 134
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ +P M N G I+ +S A +A + +AY ASK +
Sbjct: 135 GIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAI 180
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 99.6 bits (249), Expect = 2e-26
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ AD++ ++ G +++++ AG V +T +I R+M+ NL+
Sbjct: 51 VIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLV 110
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S I + ++ + + E G + + S AA N S Y ASK+G+
Sbjct: 111 STILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGM 155
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 99.9 bits (250), Expect = 2e-26
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+F+ D+ D+ E + E +G VD+L+NNA I A S L E R+++VNL
Sbjct: 51 GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT 110
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + + +M + G IV ++S+ L A +AY ASK G+
Sbjct: 111 APMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL 156
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 99 bits (250), Expect = 2e-26
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
DV D +++ E R +G IL+NNAG S+ TD + +
Sbjct: 61 LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFF 120
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S I VR FLP + IVC++S+ A ++ A A++ GV
Sbjct: 121 SVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGV 166
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 99 bits (250), Expect = 3e-26
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 25 HVAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
+ + DV++ ++K + ++ G + +L+NNAGI + + + + E RI+DVN
Sbjct: 46 AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVN 105
Query: 84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
L + +P M+ + IV ISS+ A N SAY SK+ V
Sbjct: 106 LFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAV 153
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 99 bits (250), Expect = 3e-26
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A + DVSD+ +I + + V G VD L+ NAG+V +S++ T + +R++ +NL
Sbjct: 77 AAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLR 136
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ P M+E G IV +SS+A A AY SK G+
Sbjct: 137 GAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGI 182
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 99.1 bits (248), Expect = 4e-26
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
DV+ K +I + ++ +D+L N AG V +VL + + + M++N+ S
Sbjct: 52 IQTRVLDVTKKKQIDQF---ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRS 108
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
M++ FLP ML +G+I+ +SS+A+ + VN Y +K V
Sbjct: 109 MYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAV 154
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 98.7 bits (247), Expect = 6e-26
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A Y DV+ A+ K + V G + +L+NNAGI+ ++ + E +RI+DVNL
Sbjct: 55 ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLT 114
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+R + M E G I+ ISSI L V Y A+K+ V
Sbjct: 115 GVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAV 160
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 97.2 bits (243), Expect = 1e-25
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 7/105 (6%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
A AD++D+ E K L + + G +D+L++ G +SV +E ++ +L++
Sbjct: 44 ARALPADLADELEAKAL---LEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLT 100
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
L V + +AY A+K +
Sbjct: 101 ----AAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGAL 141
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 98.0 bits (245), Expect = 1e-25
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
++ D+ + A L +G +DI++NNAG+++ + TD + + VN+
Sbjct: 68 DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVE 127
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ ++ R +P M G IV ++S L + Y +K +
Sbjct: 128 APFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAAL 173
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 97.3 bits (243), Expect = 2e-25
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
AV+ AD+SD A+I+ L R+ G VDIL+NNAGI + V ++I+ +NL
Sbjct: 53 AVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLS 112
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ R LP M N G I+ I+S+ L + +AY A+K+GV
Sbjct: 113 AVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV 158
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 97.6 bits (244), Expect = 2e-25
Identities = 20/106 (18%), Positives = 40/106 (37%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
D+ + +I +L E R +G DIL+ + G + + + + S
Sbjct: 60 VDIVAGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARS 119
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
+ + R M+E G +V I S+ L +++ + V
Sbjct: 120 AVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVI 165
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 96.8 bits (242), Expect = 2e-25
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 26 VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ KAD++ + +I + + ++ D + NAGI+ S+ I++++D+N+
Sbjct: 45 NLKFIKADLTKQQDITNVLDIIKN-VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVW 103
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S+I ++ ++ IV S A N AY SK +
Sbjct: 104 SSIYFIKGLENNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAI 147
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 97.6 bits (244), Expect = 2e-25
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
D+ + E KL + V + G ++IL+NNAG+V T+ + IM N
Sbjct: 72 VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNF 131
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + + P + + G+++ +SSIA +A +VS Y ASK +
Sbjct: 132 EAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI 178
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 97.3 bits (243), Expect = 3e-25
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
++ AD++ +EI + + G DIL+NNAG+ + + +RI+ VNL
Sbjct: 78 VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLS 137
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S+ +R +P M + G I+ I+S L A+ SAY A+K+G+
Sbjct: 138 SSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGI 183
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 96.8 bits (242), Expect = 3e-25
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A Y DV+ + + +++ + G VD L+NNAGI + + +++++NL
Sbjct: 53 ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLT 112
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
++ +P M + G IV ISS A L S+Y ASK+GV
Sbjct: 113 GVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGV 158
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 96.5 bits (241), Expect = 4e-25
Identities = 20/105 (19%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
++D+ + + + ++ + +VD L++ A + +++ A + E +D+N++
Sbjct: 50 VEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIV 109
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
++ R+ LP + + G ++ I+S A + Y ASK+ +
Sbjct: 110 PAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHAL 153
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 96.4 bits (241), Expect = 4e-25
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+F+ D SD+ KL + + G V L+NNAGI + SV T E +++ VNL
Sbjct: 56 IQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLD 115
Query: 86 SNIKMVREFLPDMLENNTGH-IVCISSIAALTAAVNVSAYFASKYGV 131
R + M G I+ +SSI ++ AY ASK V
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 96.5 bits (241), Expect = 5e-25
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
A AD++D + E + VD+L+NNAGI+A + + ++ VNL +
Sbjct: 81 AEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDA 140
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ R F ML + +G IV I+S+ + NV+AY ASK+ V
Sbjct: 141 AWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAV 185
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 95.7 bits (239), Expect = 6e-25
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
AD+SD A++++L V + G++D L+NNAG+ ++ T+ + + M+ NL
Sbjct: 60 TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK 119
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + M ++GHI I+S+AA A + S Y SK+G
Sbjct: 120 GTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQ 165
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 96.5 bits (241), Expect = 6e-25
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 26 VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ AD+ + + + + K VDILINN GI D + ++ +VN+M
Sbjct: 62 ILQPVVADLGTEQGCQDV---IEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIM 118
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S +++ R +L M+E G ++ I+S AA+ + ++ Y A+K
Sbjct: 119 SGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQ 164
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 95.7 bits (239), Expect = 7e-25
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 27 AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ DV ++ + + G + L+NNAG+ V T E ++D NL
Sbjct: 52 ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLT 111
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
+R +P +L G IV + S+A +AY ASK+G+
Sbjct: 112 GAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLL 158
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 95.7 bits (239), Expect = 9e-25
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
+ ADVSD+A+++ + G +D NNAGI + ++++ +NL
Sbjct: 66 VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 125
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + L M E +G +V +S+ + N S Y A+K+GV
Sbjct: 126 RGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGV 172
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 95.8 bits (239), Expect = 1e-24
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+Y AD+S ++ L + VR++G +DIL+NNAGI ++ + + + I+ +NL
Sbjct: 57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ LP M + G I+ I+S L A+ N SAY A+K+GV
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV 162
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 95.6 bits (239), Expect = 1e-24
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
D+S ++E ++L V G ++IL+NNAGIV +T + IM +N
Sbjct: 60 VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINF 119
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + P + + G++V ISS++ A + Y A+K +
Sbjct: 120 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAM 166
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 95.3 bits (238), Expect = 2e-24
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVN 83
AV+ D++++ ++ L + + G +DI+ NNA + +L T + VN
Sbjct: 59 AVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVN 118
Query: 84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ M + +P ++ G IV ISS A A +AY +K +
Sbjct: 119 ARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAI 166
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 94.9 bits (237), Expect = 2e-24
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
+ KADVS K ++++ +D+L NNAGI+ + +A E+ ER++ VNL
Sbjct: 58 VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNL 117
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S R +P ML+ G IV +SIA + + Y +K+G+
Sbjct: 118 YSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGL 164
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 95.3 bits (238), Expect = 2e-24
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 20 LPTKTHVAVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIER 78
+ A+ DV+D+ + + G +D+L+NNAG++ S + A E ER
Sbjct: 48 IRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWER 107
Query: 79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
++DVN+ + + LP M +G I+ I SI AL+ + Y A+K+ V
Sbjct: 108 MIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVR 161
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 94.9 bits (237), Expect = 2e-24
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
V + ++L V G VDIL++NA + + E+ ++I+ VN+
Sbjct: 65 VTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV 124
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + M + +P+M + G ++ +SS+ A N+ Y SK +
Sbjct: 125 KATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTAL 171
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 94.6 bits (236), Expect = 2e-24
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
Y D+++ + +K+L N V+ G +D L+ NAG++ + D +++ D+N
Sbjct: 52 FFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINF 111
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S + +V LP++ + N G++V +SS A + AY +SK +
Sbjct: 112 FSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAAL 157
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 94.5 bits (236), Expect = 2e-24
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIV---ASSSVLAHTDHEIERIMDV 82
+ +ADV+D+ ++ + + G +D+L+NNAGI + + + +++M V
Sbjct: 54 VLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAV 113
Query: 83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
N+ R LP ML G IV I+S+A+L A SAY SK V
Sbjct: 114 NVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAV 162
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 94.6 bits (236), Expect = 2e-24
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 13/110 (11%)
Query: 27 AVYFKADVSDK-AEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
+ DV+ AE KKL + ++ VDILIN AGI+ DH+IER + +N
Sbjct: 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINF 108
Query: 85 MSNIKMVREFLPDMLENNTGH---IVCISSIAALTAAVNVSAYFASKYGV 131
+ L + G I I S+ A V Y ASK V
Sbjct: 109 TGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAV 158
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 94.1 bits (235), Expect = 3e-24
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ KA+V A+IK++ + G +D+ +NNA V+ + + M++N
Sbjct: 56 VLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAK 115
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + +E M +N GHIV ISS+ ++ N + SK +
Sbjct: 116 ALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAAL 161
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 94.5 bits (236), Expect = 4e-24
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
Y D++++ E + + G + +++ AG + + D E R +D+N+
Sbjct: 65 IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNV 124
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ +++ +M+ G V ISSIAA AY +K V
Sbjct: 125 NGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAV 171
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 94.5 bits (236), Expect = 4e-24
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
V D D ++K+ ++ V +G +DI++ NAG+ A + T + +MD+N+
Sbjct: 75 IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVT 134
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
V P ++E G I+ ISS A + + Y ASK+ V
Sbjct: 135 GTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAV 181
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 94.6 bits (236), Expect = 4e-24
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-----ERIM 80
AV DV + K+ + G +D LI NAGI S+ LA + + I
Sbjct: 53 AVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIF 112
Query: 81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
VN+ I V+ LP ++ + G +V S A Y A+K+ V
Sbjct: 113 HVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAV 162
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 93.4 bits (233), Expect = 5e-24
Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 20 LPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI 79
L D++ E+++L E + ++++AG + +I+ +
Sbjct: 45 LSNNVGYRA---RDLASHQEVEQLFEQLD--SIPSTVVHSAGSGYFGLLQEQDPEQIQTL 99
Query: 80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
++ NL S I ++RE + + ++V I S AA S Y A K+ V
Sbjct: 100 IENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVK 151
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 93.8 bits (234), Expect = 5e-24
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
A + DV+ + + + VR G +D L NNAG + + + + R++ +N+
Sbjct: 58 ARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV 117
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+++ M+ N G IV +S+A + N++AY SK +
Sbjct: 118 TGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI 164
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 93.7 bits (234), Expect = 6e-24
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
A ADV+D + + V IL+N+AGI L D ++M VN+
Sbjct: 60 AARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDG 119
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGV 131
R F M+ G IV + S++ S+Y ASK V
Sbjct: 120 MFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAV 166
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 93.4 bits (233), Expect = 7e-24
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
A+ AD+S +A++ + K G VDIL+NNAGI + E +RI+ VN+
Sbjct: 57 ALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNV 116
Query: 85 MSNIKMVREFLPDMLENNTGH----IVCISSIAALTAAVNVSAYFASKYGV 131
M + +P EN I+ ++S A N++ Y A+K V
Sbjct: 117 RGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWV 167
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 93.3 bits (233), Expect = 7e-24
Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+++ + DVS +A+ + R++G +++L+NNAGI+ + + R++ +N
Sbjct: 54 SMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTE 113
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S ++ + M E G I+ ++S+++ + Y ASK V
Sbjct: 114 SVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAV 158
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 93.3 bits (233), Expect = 7e-24
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A + D++ + E+ L + + K+G VDIL+NNAG + R ++N+
Sbjct: 62 AFACRCDITSEQELSALADFAISKLGKVDILVNNAGG-GGPKPFDMPMADFRRAYELNVF 120
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S + + P+M +N G I+ I+S+AA +N+++Y +SK
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAA 166
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 93.3 bits (233), Expect = 8e-24
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ K DV+ ++++ L +++ G +D++INNAG+ S + + +++D NL
Sbjct: 59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
RE + +EN+ G ++ +SS+ Y ASK G+
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGM 165
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 93.8 bits (234), Expect = 8e-24
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ DV D A +++L + + + G +D+++ NAG+++ V TD + + ++ VNL
Sbjct: 79 ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLT 138
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
+ +R +P M+E G IV +SS A L A Y ASK+G+
Sbjct: 139 GTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGL 185
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 93.4 bits (233), Expect = 1e-23
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
V + DV D +K + V ++G +DI++ NAGI L T E ++D+NL
Sbjct: 78 IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINL 137
Query: 85 MSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
K V+ +P M+ G I+ SS+ L A + Y A+K+GV
Sbjct: 138 AGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGV 185
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 93.0 bits (232), Expect = 1e-23
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A + DV+ + I V G +DIL+NNA + + ++ T E++ +N+
Sbjct: 56 AYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVA 115
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
+ ++ M+ G I+ ++S A V+ Y A+K V
Sbjct: 116 GTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAV 162
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 92.2 bits (230), Expect = 1e-23
Identities = 22/107 (20%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
Y DVS +++ ++ V + G VD+++ NAG+ + ++ E +++VNL+
Sbjct: 54 VFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLL 113
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
+ ++ FL + +V S ++A Y ++K+
Sbjct: 114 GVWRTLKAFLDSLKRTGGLALVTTSDVSARLIP-YGGGYVSTKWAAR 159
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 92.7 bits (231), Expect = 2e-23
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 27 AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ ++ D+S++ +I + +R + VDI INNAG+ ++L+ + + + +VN++
Sbjct: 85 LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVL 144
Query: 86 SNIKMVREFLPDMLENNT--GHIVCISSIAAL----TAAVNVSAYFASKYGVT 132
+ RE M E N GHI+ I+S++ + + Y A+KY VT
Sbjct: 145 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF--YSATKYAVT 195
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 92.2 bits (230), Expect = 2e-23
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
+ DV ++A I+++ ++ +DIL+NNAG+ E E ++D N
Sbjct: 48 LYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNN 107
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
+ M R LP M+E N GHI+ I S A + Y A+K V
Sbjct: 108 KGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVR 155
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 91.8 bits (229), Expect = 2e-23
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
D+ D +K + IG VD+L+NNA +V L T +R VNL S
Sbjct: 54 IEPVCVDLGDWDATEKA---LGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRS 110
Query: 87 NIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
++ + DM+ G IV +SS+ A N+ Y ++K +
Sbjct: 111 VFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAM 156
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 91.8 bits (229), Expect = 2e-23
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
D+ D ++ + +G VD+L+NNA + L T +R +VNL +
Sbjct: 54 IEPVCVDLGDWEATERA---LGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA 110
Query: 87 NIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
I++ + ++ G IV +SS + A N S Y ++K +
Sbjct: 111 VIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGAL 156
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 91.8 bits (229), Expect = 2e-23
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ K DVS +++ + V G DIL+NNAGI T + ++ ++N+
Sbjct: 56 VLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVD 115
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S M + F+P M N G I+ ++S + Y ++K
Sbjct: 116 SGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAAN 161
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 91.8 bits (229), Expect = 3e-23
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
A+ D++D A++ L +E ++ G VD++INNA V S A+T E + +++ +
Sbjct: 62 ALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTV 121
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+++++ F P + E+ G +V ++S+ + AY +K +
Sbjct: 122 FGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSAL 167
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 92.4 bits (230), Expect = 3e-23
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
+ D++ +IK EN+ + +DIL+NNAG S + E I+ + D N+
Sbjct: 89 VHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNV 148
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
+ I + + LP N+G IV + SIA A S Y ASK+ V
Sbjct: 149 TALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVG 196
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 91.9 bits (229), Expect = 3e-23
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 33 DVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
DV+D I + + + G VD+L+NNAG + T+ E+ + ++++ ++
Sbjct: 59 DVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLT 118
Query: 92 REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
R LP M E +G +V ISS + SAY A+K +
Sbjct: 119 RALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAAL 158
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 91.8 bits (229), Expect = 3e-23
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
D+++ +L G +D+L+NNAGI V+ + + VNL
Sbjct: 72 VHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLR 131
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + M+ G I+ ++S AAL + AY SK G+
Sbjct: 132 APALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGL 178
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 90.7 bits (226), Expect = 8e-23
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ + DV+DK K G D ++NNAG++ + +E +R+ DVN++
Sbjct: 61 TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ ++ L M N G I+ ISSIA + +AY +K+ V
Sbjct: 121 GLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAV 166
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 90.7 bits (226), Expect = 9e-23
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
AV+ DV+ + ++K L +E +R+ G +D ++NNAG T + +++++NL
Sbjct: 56 AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNL 115
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + + LP + ++ G+++ ISS+ Y A+K V
Sbjct: 116 LGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAV 161
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 90.3 bits (225), Expect = 1e-22
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
A D+S I V G D+L+NNAG+ L E + ++ VNL
Sbjct: 80 AESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNL 139
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ ++R F P M+ GHI+ ISS+A + +AY ASK+G+
Sbjct: 140 KAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGL 186
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 90.3 bits (225), Expect = 1e-22
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
AV +AD ++ AE+ +L E V+ G +D+L NAG + + T+ + + D N+
Sbjct: 77 AVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVK 136
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ V++ LP + +V S A T S Y ASK +
Sbjct: 137 GVLFTVQKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAAL 180
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 90.7 bits (226), Expect = 1e-22
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
+ + DV D ++ ++ V ++G +DI++ NA + + + L D + ++DVNL
Sbjct: 91 IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNL 150
Query: 85 MSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGV 131
R +P ++ G IV SSI L A N+ Y ASK+G+
Sbjct: 151 NGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGL 198
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 89.8 bits (224), Expect = 2e-22
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A DV+D+ I+ ++ + +VDILINNAGI ++ ++++D NL
Sbjct: 60 AHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLT 119
Query: 86 SNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S + R M+ N+ G I+ I S+ + A V+ Y A+K G+
Sbjct: 120 SAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGI 166
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 90.0 bits (224), Expect = 2e-22
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
++ + DV+D+ +++ + V G +DIL+NNAG+ + E+ + +NL+
Sbjct: 60 TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLV 111
Query: 86 SNIKMVREFLPDMLENNTGH---IVCISSIAALTAAVNVSAYFASKYGV 131
S I L M + N G I+ +SS+A L Y ASK+G+
Sbjct: 112 SVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGI 160
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 89.9 bits (224), Expect = 2e-22
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
D S + E +KL + V + G +DILINN G + S L +T + + NL
Sbjct: 65 VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 124
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S + + P + + G+I+ +SSIA + +A S Y A+K +
Sbjct: 125 ESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGAL 171
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 89.9 bits (224), Expect = 2e-22
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIV--ASSSVLAHTDHEIERIMDVN 83
+ DV+ +++ L + + K G +DI+ N G++ S+L + + +R+MD+N
Sbjct: 66 ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN 125
Query: 84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVS-AYFASKYGV 131
+ + + M+ G IV +SI++ TA VS Y A+K+ V
Sbjct: 126 VYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV 174
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 89.5 bits (223), Expect = 2e-22
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
AV K DVSD+ ++ + + +G D+++NNAG+ S+ + + T ++++ ++N+
Sbjct: 53 AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVK 112
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
I ++ + + G I+ S A ++ Y +SK+ V
Sbjct: 113 GVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV 159
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 89.5 bits (223), Expect = 2e-22
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
AV+ DV+DKA +E K+G D+L+NNAGI +L T+ ++++I VN+
Sbjct: 55 AVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVF 114
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
S ++ E G I+ +SIAA+ +SAY +K+ V
Sbjct: 115 SVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV 161
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 89.9 bits (224), Expect = 2e-22
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ K DV D+A ++ E +G +DI I NAGI + + + + ++ NL
Sbjct: 73 CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLT 132
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ P M++ N G IV +SS+ +A ++Y +SK+GV
Sbjct: 133 GTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGV 178
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 89.5 bits (223), Expect = 3e-22
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
A DV D+A + L VR+ G +D NNAG + + ++ E +D NL
Sbjct: 59 AAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNL 118
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
S + +P + G + SS TA V+ Y ASK G+
Sbjct: 119 TSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGL 166
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 89.2 bits (222), Expect = 3e-22
Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 26 VAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
D+S ++ E + + G +D L+NNAG+ + + T + + + VN+
Sbjct: 69 DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNV 128
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALT--AAVNVSAYFASKYGV 131
+ + +ML+ +GHIV I++ + + +K G+
Sbjct: 129 AGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGL 177
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 89.2 bits (222), Expect = 4e-22
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
A+ DV+D ++ L V K G VD+L NNAG A + + ++++D NL
Sbjct: 76 ALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNL 135
Query: 85 MSNIKMVREFLPDMLENNT--GHIVCISSIAALTAAVNVSAYFASKYGVT 132
+E M G I+ SI+A + + Y A+K+ +T
Sbjct: 136 TGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAIT 185
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 88.7 bits (221), Expect = 4e-22
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
DV+ + L + V K G +D+L+NNAG+ + V+ TD E +R+++V L
Sbjct: 75 VEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLT 134
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
S ++ R L + G IV +S+ A + S Y A+K GV
Sbjct: 135 SVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGV 181
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 88.6 bits (220), Expect = 5e-22
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIG-----YVDILINNAGI---VASSSVLAHTDHEIER 78
V AD+ +A +++L VR++ +LINNA V+ + + E+
Sbjct: 62 VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121
Query: 79 IMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTAAVNVSAYFASKYGV 131
+NL S + + L ++ + +V ISS+ AL Y A K
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAAR 176
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 89.2 bits (222), Expect = 6e-22
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ +ADV D A ++ + +E + + G++DIL++N GI V++ TD + I+ NL+
Sbjct: 109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLI 168
Query: 86 SNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
R LP M+E G ++ +SS L A S Y ASK+GV
Sbjct: 169 GAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGV 215
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 89.4 bits (222), Expect = 6e-22
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 33 DVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVR 92
DV D + E V + G VD+L+ NAG+ + A + + ++DVN++ ++M++
Sbjct: 65 DVRDSKSVAAARERVTE-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQ 123
Query: 93 EFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTE 133
FLPDM +G ++ S+ L Y ASK+ G+ E
Sbjct: 124 AFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCE 167
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 88.0 bits (219), Expect = 8e-22
Identities = 21/111 (18%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 23 KTHVAVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIM 80
+ ++L + +D +++NAG++ ++ + ++ + +M
Sbjct: 62 RQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVM 121
Query: 81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
VN+ + + + LP +L+++ G +V SS N AY ASK+
Sbjct: 122 QVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFAT 172
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 87.6 bits (218), Expect = 8e-22
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
DV+D A++ ++ + + + +D L+N AGI+ + + + ++ VN+
Sbjct: 48 FATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVG 107
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
+ ++ + G IV ++S AA T + +SAY ASK +
Sbjct: 108 GAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALK 154
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 87.6 bits (218), Expect = 9e-22
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Query: 27 AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
++D++D EI L +G +D+L NAG+ ++ +R VN
Sbjct: 56 VHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTK 115
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
V+ P + G IV SS+A +S Y ASK +
Sbjct: 116 GAFFTVQRLTPLI--REGGSIVFTSSVADEGGHPGMSVYSASKAAL 159
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 87.2 bits (217), Expect = 1e-21
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVAS---SSVLAHTDHEIERIMDV 82
A+ DVSD K + + + + G +D L+NNA I +L ++ M V
Sbjct: 60 AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119
Query: 83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
NL + R M + G IV SS AA + Y +K G+
Sbjct: 120 NLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY---YGLAKVGI 165
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 87.4 bits (217), Expect = 1e-21
Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
F S + EIK + + K VD + AG + + + + ++ ++D+NL
Sbjct: 61 DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNL 120
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S + + G V + AAL + AY A+K
Sbjct: 121 YSAFASAHIGAKLLNQG--GLFVLTGASAALNRTSGMIAYGATKAAT 165
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 87.2 bits (217), Expect = 1e-21
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ DV+ +A + + + +G D+L NAG+ + TD E + DVN
Sbjct: 60 GFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNAR 119
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
+ L +NT G IV +S+AA A ++ Y ASK+ V
Sbjct: 120 GVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAV 166
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 87.2 bits (217), Expect = 1e-21
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ + +V+D+ + + + + G + +L+NNAG + E +NL
Sbjct: 63 AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGG-GGPKPFDMPMSDFEWAFKLNLF 121
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S ++ + P M + G I+ ISS+A V +++Y +SK V
Sbjct: 122 SLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAV 167
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 87.3 bits (217), Expect = 2e-21
Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 4/110 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
DV D ++ L + +D+L+NNAG L T + I+ NL
Sbjct: 85 VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANL 144
Query: 85 MSNIKMVREFLPDMLENNT--GHIVCISSIAALTAAVNVSAYFASKYGVT 132
+ M G I+ SI+A T N + Y A+K+ +T
Sbjct: 145 TGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAIT 194
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 87.2 bits (217), Expect = 2e-21
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ F+ DVS+ E+KKL K G +D ++N AGI E ++++VNL
Sbjct: 73 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLF 132
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
+ RE + E++ I+ I S+ + N+SAY ASK GV
Sbjct: 133 GTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV 179
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 86.9 bits (216), Expect = 3e-21
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
+ DV D+A + +N+ + + LINNAG+ + D + + ++D N+
Sbjct: 71 VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNI 130
Query: 85 MSNIKMVREFLPDMLENNTG-HIVCISSIAALTAAVNVSAYFASKYGVT 132
+ R LP ++ + G IV + S+A Y +K V
Sbjct: 131 KGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVE 179
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 86.4 bits (215), Expect = 3e-21
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 23 KTHVAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEI-ERIM 80
+ + + + + ++L V + G +D L++NA I+ + L E ++M
Sbjct: 64 PQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVM 123
Query: 81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
VN+ + + R LP + + I SS N AY SK+
Sbjct: 124 HVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFAT 174
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 86.9 bits (216), Expect = 3e-21
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
A+ +ADVSD+ +++ + V K G++DI++ NAGI + + + + VNL
Sbjct: 79 AIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNL 138
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALT--AAVNVSAYFASKYGV 131
+ +P + + G IV +SSI +AY A+K
Sbjct: 139 RGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQ 187
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 86.9 bits (216), Expect = 3e-21
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A + DV+D+ I+ + + ++G +DIL+NNAGI+ ++ T + +++D++L
Sbjct: 85 AHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLN 144
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + + +P M++ G I+ I S+ + VSAY A+K G+
Sbjct: 145 APFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGL 190
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 88.0 bits (218), Expect = 3e-21
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ DV D+ +I + ++K G +DIL+NNA ++ ++ L ++ +M+VN
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGVT--------ENH 135
+ +P + ++ HI+ IS L AY +KYG++ E
Sbjct: 163 GTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK 222
Query: 136 PSIKCFSGYMLW-GTTVTTPL 155
I + LW T + T
Sbjct: 223 GEIAVNA---LWPKTAIHTAA 240
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 85.7 bits (213), Expect = 5e-21
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ DV+D+ + + +G +DIL+NNAGI+ V + R++D NL+
Sbjct: 58 VHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLL 117
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
+ M R LP +L + G +V +SSIA N + Y A+K+GV
Sbjct: 118 GLMYMTRAALPHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVN 163
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 85.3 bits (212), Expect = 6e-21
Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
Y + + E +L E V G VD+L++N + + ++
Sbjct: 46 ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQ 105
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ +V M + +GHI+ I+S +S Y +++ G
Sbjct: 106 IRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGA 152
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 85.3 bits (212), Expect = 7e-21
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGI-VASSSVLAHTDHEIERIMDVNL 84
DV++ ++ + G VDIL+ AGI ++ TD + + +D+NL
Sbjct: 64 VSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINL 123
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGV 131
+ + MLE G IV I S++ L +AY ASK GV
Sbjct: 124 NGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGV 172
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 85.3 bits (212), Expect = 8e-21
Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 2/106 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
AV D S + I + + + +++NA + + R+ V+++
Sbjct: 73 AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHML 131
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + P + + IV IS + AY A+K G+
Sbjct: 132 APYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGL 177
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 85.0 bits (211), Expect = 2e-20
Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ D+ D + + V + G +DI +NNA + S+ + + + +
Sbjct: 67 ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAA-VNVSAYFASKYGVT 132
+ + +P M + HI+ +S L + + Y +KYG+T
Sbjct: 127 GTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMT 174
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 84.6 bits (210), Expect = 2e-20
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ K D+ ++ +++ V G +DIL+NNA + L + + VN
Sbjct: 64 GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNAR 123
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGVT 132
+ + LP +L+ HI+ ++ +L A + Y +K G++
Sbjct: 124 GSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMS 172
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 83.1 bits (206), Expect = 2e-20
Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Query: 31 KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
D+++ IKK+ ++G VD +++ G S + T + + L I +
Sbjct: 40 TVDITNIDSIKKM---YEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINL 96
Query: 91 VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
V + + + G + I V ++ + V
Sbjct: 97 VLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAV 135
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 84.1 bits (209), Expect = 2e-20
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+++D+S++ E+ KL + ++ G VDI IN G V ++ ++ E + + +N
Sbjct: 65 VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNK 124
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+++ M N GHI+ I++ S Y +K V
Sbjct: 125 VAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGFYSTYAGNKAPV 168
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 85.2 bits (211), Expect = 2e-20
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 33 DVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
DV + + + ++ + + G +D+LI+NAG + A T + + D+N++S ++
Sbjct: 67 DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVN 126
Query: 92 REFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
R LP M G ++ ISS ++ ++ YFA+K +
Sbjct: 127 RAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAM 167
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 84.2 bits (209), Expect = 3e-20
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ KAD+ EI KL ++ V G++DI ++N+G+V+ + T+ E +R+ +N
Sbjct: 70 AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTR 129
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
+ RE + E G IV SS + +V S Y SK V
Sbjct: 130 GQFFVAREAYRHLTEG--GRIVLTSSNTSKDFSVPKHSLYSGSKGAV 174
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 83.8 bits (208), Expect = 4e-20
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
AD+S +A ++L +DIL+NNAG +++ ++ E++M +N+
Sbjct: 79 CQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVT 138
Query: 86 SNIKMVREFLPDMLEN----NTGHIVCISSIAALTA-AVNVSAYFASKYGV 131
S +++ LP + + N ++ I S+A ++A AY SK +
Sbjct: 139 SVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAAL 189
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 83.8 bits (208), Expect = 4e-20
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
V +AD+S +E+ L ++ V G +D +++N+G+ L T +++ ++N
Sbjct: 73 GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTR 132
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
+ ++ L G I+ SSIAA+ + N + Y SK V
Sbjct: 133 GQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAAV 177
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 83.8 bits (208), Expect = 4e-20
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
AV DV + A+I + + R+ G +D L+NNAGIV + E IER++ VN+
Sbjct: 78 AVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNV 137
Query: 85 MSNIKMVREFLPDMLENNT---GHIVCISSIAALTAAVNVSA-YFASKYGV 131
+I E + M + G IV +SS+AA+ + Y ASK +
Sbjct: 138 TGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAI 188
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 83.4 bits (207), Expect = 4e-20
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ +ADVSD A +++L G VD+L+NNAGI+ +++ D +R++ VNL
Sbjct: 79 ALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLK 138
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+RE + G I+ +S+ + Y A+K GV
Sbjct: 139 GTFNTLREAAQRLRVG--GRIINMSTSQVGLLHPSYGIYAAAKAGV 182
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 82.9 bits (206), Expect = 4e-20
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
YF DV+D +KK E K+ +D+L+NNA + + + E + I+ V L
Sbjct: 49 LFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLK 108
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ ++ R ++++N G I+ I+S A + + AY ++K G+
Sbjct: 109 APYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGI 153
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 82.9 bits (206), Expect = 5e-20
Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
AV D+ + + +G + +L++ A + L + E R++ ++L
Sbjct: 45 AVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDV 104
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVN--VSAYFASKYGV 131
+ + P M E G ++ I S+ TA + AY +K +
Sbjct: 105 AFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL 151
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 83.4 bits (207), Expect = 5e-20
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A +K V +KL + V G +D I NAG A S +L + ++ V+L
Sbjct: 75 AKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLN 134
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV----SAYFASKYGV 131
+ E TG +V +S++ N ++Y +K G
Sbjct: 135 GTFHCAKAVGHHFKERGTGSLVITASMSGHI--ANFPQEQTSYNVAKAGC 182
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 83.4 bits (207), Expect = 6e-20
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A KA+V +I ++ E V+ G +DI+ +N+G+V+ V T E +R+ +N
Sbjct: 81 AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTR 140
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
+ RE + G ++ + SI AV + Y SK +
Sbjct: 141 GQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGSKGAI 185
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 83.0 bits (206), Expect = 7e-20
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
A+ KAD+++ AE++ + K G + L++ AG + + +A + +++DVNL
Sbjct: 60 ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNL 119
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALT-AAVNVSAYFASKYGV 131
S + LP M + G IV SS A AY SK V
Sbjct: 120 TSLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGPGALAYATSKGAV 165
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 82.2 bits (204), Expect = 1e-19
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAG-IVASSSVLAHTDHEIERIMDVNL 84
A +F AD++ ++L +E V K G +D+LINNAG +V + D + +MD N+
Sbjct: 59 AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANI 118
Query: 85 MSNIKMVREFLPDMLE-----NNTGHIVCISSIAALTA-AVNVSAYFASKYGV 131
S + + LP + T ++ SIA T Y A+K +
Sbjct: 119 RSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFL 171
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 81.9 bits (203), Expect = 2e-19
Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 10/114 (8%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSS-------VLAHTDHEIE 77
V D S ++E++ L E V + G +D+L+NNA + +
Sbjct: 56 CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD 115
Query: 78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
I +V L + M+ G IV ISS +L NV Y K
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNV-PYGVGKAAC 168
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 81.9 bits (203), Expect = 2e-19
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
DV+ E+ + G + IL+N+AG D ++D NL
Sbjct: 75 VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLT 134
Query: 86 SNIKMVREFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
++ RE L M E G IV I+S + + Y ASK+GV
Sbjct: 135 GVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGV 182
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 81.4 bits (202), Expect = 2e-19
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ + DV + +I+K+ + K G +DILINNA + + ++++ L
Sbjct: 57 ILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLN 116
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
+ +E G+I+ + + A A V A+K GV
Sbjct: 117 GTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV 163
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 81.4 bits (202), Expect = 2e-19
Identities = 9/104 (8%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Query: 32 ADVSDKAEIKKL-NENVRKIGYVDILINNAGI---VASSSVLAHTDHEIERIMDVNLMSN 87
+ + ++L + ++ +D +++N I + + ++ +I ++ + +
Sbjct: 51 TIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFP 110
Query: 88 IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
I +++ + + ++ I+S Y ++
Sbjct: 111 ILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAAT 154
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 81.8 bits (203), Expect = 2e-19
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
AV +AD D I++ E V +G +DIL+N+AGI S+ + T + + +M VN
Sbjct: 83 AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFR 142
Query: 86 SNIKMVREFLPDMLENNTGHIVCISS-IAALTAAVNVSAYFASKYGV 131
+ +R + + G I+ I S +A L +S Y ASK +
Sbjct: 143 APFVAIRSASRHLGDG--GRIITIGSNLAELVPWPGISLYSASKAAL 187
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 81.5 bits (202), Expect = 3e-19
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSS----VLAHTDHEIERIMD 81
ADV+ A ++ + + K G +DIL+NNAG S A + + ++
Sbjct: 60 VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLN 119
Query: 82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
+NL S I + ++ +P L + G IV ISSIA+ L A + Y +K +
Sbjct: 120 LNLRSVIALTKKAVP-HLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAI 169
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 81.4 bits (202), Expect = 3e-19
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ + DV+ +++ + ++ ++G +DI + NAGIV+ ++L E +RI D N+
Sbjct: 83 ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVT 142
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAV--NVSAYFASKYGV 131
+ M++ G I+ +S++ + VS Y SK V
Sbjct: 143 GVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAV 191
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 81.1 bits (201), Expect = 4e-19
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASS--SVLAHTDHEIERIMDVN 83
++ +AD++D + + + V + G +D L+NNAGI + L + I+ VN
Sbjct: 81 VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVN 140
Query: 84 LMSNIKMVREFLPDMLENNT---GHIVCISSIAALTAAVNVSAYFASKYGV 131
L + + L ML ++ I+ I+S++A+ + Y SK G+
Sbjct: 141 LRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGL 191
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 80.7 bits (200), Expect = 5e-19
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 16/118 (13%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A + DV D+A + + V + G +D+++ NAGI + L DV+ +
Sbjct: 73 AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHL--PVQAFADAFDVDFV 130
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV-----------SAYFASKYGVT 132
I V LP + I+ S+A L AA + Y +K V
Sbjct: 131 GVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVD 186
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 80.7 bits (200), Expect = 6e-19
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
V +ADV D+ + + ++G +DI++ NAGI ++ D ++DVNL
Sbjct: 76 IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP----MSAGDDGWHDVIDVNLT 131
Query: 86 SNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNV----SAYFASKYGV 131
++ +P +++ G IV ISS A L + Y A+K+GV
Sbjct: 132 GVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGV 182
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 80.0 bits (198), Expect = 9e-19
Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ DV + ++ +++ G +DILIN A A + + + +MD++
Sbjct: 79 CLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTS 138
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ R ++ G IV I++ ++K V
Sbjct: 139 GTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAV 184
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 79.5 bits (197), Expect = 1e-18
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ + DVSD+A+ L V + G +D++ NAG+ + + T ++ I VN+
Sbjct: 62 VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVN 121
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSI-AALTAAVNVSAYFASKYGV 131
V+ L ++ + +G +V SSI +T S Y A+K
Sbjct: 122 GTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQ 168
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 79.5 bits (197), Expect = 1e-18
Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVN 83
+ +K ++SD +++ ++ + G +D+ + NAG+ + +I+ V+
Sbjct: 85 SKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVD 144
Query: 84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV----SAYFASKYGV 131
L +N G ++ SSI+ VN+ + Y +K
Sbjct: 145 LNGVYYCSHNIGKIFKKNGKGSLIITSSISGKI--VNIPQLQAPYNTAKAAC 194
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 79.6 bits (197), Expect = 2e-18
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI----ERIMD 81
ADV+ + ++ N +++ G +D+L+NNAG + + + +
Sbjct: 60 VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119
Query: 82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
+NL + I+M ++ P ++ + G IV +SSI A A + Y +K +
Sbjct: 120 LNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAAL 169
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 78.8 bits (195), Expect = 2e-18
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL----AHTDHEIERIMDV 82
A + ADV+D+A + + +G + I++N AG + VL + +I+D+
Sbjct: 54 ARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113
Query: 83 NLMSNIKMVREFLPDMLENNT--------GHIVCISSIAALTAAVNVSAYFASKYGV 131
NL+ + ++R + + G I+ +S+AA + +AY ASK GV
Sbjct: 114 NLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGV 170
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 78.4 bits (194), Expect = 2e-18
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL----AHTDHEIERIMDV 82
+Y + DV+ + ++++ ++ + +++ AG+ + +L H R+++V
Sbjct: 41 LIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEV 100
Query: 83 NLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
NL+ ++R M EN G IV +S+AA + +AY ASK GV
Sbjct: 101 NLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGV 155
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 78.8 bits (195), Expect = 4e-18
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVN 83
ADV++ + + N + K G +DIL+NNAG + ++ +N
Sbjct: 80 INAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLN 139
Query: 84 LMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
+ I+M ++ +++ G IV +SSI A A Y +K +
Sbjct: 140 FQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAAL 187
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 78.0 bits (193), Expect = 4e-18
Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKI-------GYVDILINNAGIVASSSVLAHTDHEIERI 79
A A++ ++ L ++ DILINNAGI + + T+ +R+
Sbjct: 59 AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRM 118
Query: 80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ VN + ++++ L + + I+ ISS A + + AY +K +
Sbjct: 119 VSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAI 168
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti}
PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 77.1 bits (191), Expect = 7e-18
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A AD+SD +K L ++ G +DIL+NNA IV + +I+DVNL
Sbjct: 54 ARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLT 113
Query: 86 SNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ R M G ++ I+S N++AY A+K GV
Sbjct: 114 GTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGV 160
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 77.0 bits (190), Expect = 9e-18
Identities = 13/101 (12%), Positives = 34/101 (33%), Gaps = 3/101 (2%)
Query: 32 ADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLMSNIKM 90
+ ++ + VD ++ AG A + + + + + + ++ ++
Sbjct: 56 SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115
Query: 91 VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ E G + + AAL + Y +K V
Sbjct: 116 SHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGAV 154
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 76.8 bits (190), Expect = 1e-17
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ ADVSD ++ + E + + G + + + AG+ S+ E+++ VNL
Sbjct: 54 AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT 113
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + R+ + E G +V S+A L A ++ Y A K GV
Sbjct: 114 GSFLVARKAGEVLEEG--GSLVLTGSVAGLGAF-GLAHYAAGKLGV 156
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 76.9 bits (190), Expect = 2e-17
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ + DVSD V G +D++ NAGI + + T ++ ++DVN+
Sbjct: 93 VIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVK 152
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV--SAYFASKYGV 131
+ V+ L + + G ++ SSI S Y ASK
Sbjct: 153 GTVYTVQACLAPLTASGRGRVILTSSITGPVTG-YPGWSHYGASKAAQ 199
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 76.9 bits (190), Expect = 2e-17
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ DV D ++ +E ++ G+ +I+INNA S + + + I D+ L
Sbjct: 78 VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLN 137
Query: 86 SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
+ E +++ + I++I A T + V ++K GV
Sbjct: 138 GTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGV 184
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 75.3 bits (186), Expect = 4e-17
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 26 VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
Y D+ + K+ VDIL+ NAG + T+ + + +D +
Sbjct: 60 GHRYVVCDLRKDLD-----LLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFL 114
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
+ IK+VR +LP M E G IV I+S + ++ N+ +++ +T
Sbjct: 115 NMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALT 161
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 75.4 bits (186), Expect = 6e-17
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A DV EI+ L V + G VD+L+NNAG + D +++ NL
Sbjct: 73 ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT 132
Query: 86 SNIKMVREFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
++ ++ L MLE TG IV I+S V+ + Y ASK+GV
Sbjct: 133 GVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 180
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 75.0 bits (185), Expect = 8e-17
Identities = 18/117 (15%), Positives = 41/117 (35%), Gaps = 12/117 (10%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVL-----AHTDHEIERIM 80
A + +V+ + + E ++ ++ + G + ++ + +
Sbjct: 78 AEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTI 137
Query: 81 DVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
D+ L + R + G +V +SIA + +AY A+K GV
Sbjct: 138 DLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGV 194
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 74.3 bits (183), Expect = 8e-17
Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 6/109 (5%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKI---GYVDILINNAGIVASSSVLAHTDHE-IERIMDV 82
+ + + + + + E VD + AG A S + + + ++
Sbjct: 44 NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQ 103
Query: 83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
++ S+ + + G + + AA+ ++ Y +K V
Sbjct: 104 SVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAV 150
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 75.0 bits (185), Expect = 1e-16
Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 2/106 (1%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ + ++ ++ E+ L + G ++ L+NN G S + +++ NL
Sbjct: 74 VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
M + ++ + G IV I A++ GV
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGV 178
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 74.2 bits (183), Expect = 1e-16
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 27 AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVL----AHTDHEIERIMD 81
+ ADV+++A+ + + G+V L+N AG +L H R +
Sbjct: 55 VRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVA 114
Query: 82 VNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
VNL+ M+R M + G IV +SIAA + +AY ASK GV
Sbjct: 115 VNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGV 170
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 74.2 bits (183), Expect = 1e-16
Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 21/126 (16%)
Query: 27 AVYFKADVSDKAEIKKLNEN-----VRKIGYVDILINNAGI-----------VASSSVLA 70
AV K D+S + + E+ R G D+L+NNA ++
Sbjct: 64 AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK 123
Query: 71 HTDHEIERIMDVNLMSNIKMVREFLPDMLE-----NNTGHIVCISSIAALTAAVNVSAYF 125
D ++ + N ++ + ++R F E + +V + Y
Sbjct: 124 PIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 183
Query: 126 ASKYGV 131
+K+ +
Sbjct: 184 MAKHAL 189
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 74.1 bits (183), Expect = 1e-16
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ +V D K+ + V+ +G +D+L+NNAGI T + + ++D NL
Sbjct: 65 FYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLT 124
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S + ++ + M+E G I+ ISS+ + Y +K G+
Sbjct: 125 SLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI 170
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 73.4 bits (181), Expect = 2e-16
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 27 AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVL------AHTDHEIERI 79
V+ ADV+ + +++ + K G VD+ +N AGI +S HT + +R+
Sbjct: 60 CVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV 119
Query: 80 MDVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
+DVNLM ++R +M +N G I+ +S+AA V +AY ASK G+
Sbjct: 120 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 177
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 73.8 bits (182), Expect = 2e-16
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ DV+D ++ E V G VD+LINNAGI ++ + T + + +M +L
Sbjct: 77 FKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLD 136
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + ++F+ M+E G IV I S+ A + Y ++K G+
Sbjct: 137 AMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGI 182
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 73.3 bits (181), Expect = 2e-16
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 6/108 (5%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A DV+D A +++ +G +D +++ AGI + + E ++ VNL
Sbjct: 51 AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLT 110
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAA--VNVSAYFASKYGV 131
+ + + M E N G IV +S L N Y AS GV
Sbjct: 111 GSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQAN---YAASMAGV 155
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 73.4 bits (181), Expect = 3e-16
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 9/114 (7%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
++ DVS+ + K + +G + LI NAG+ T + + DVN+
Sbjct: 66 TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVF 125
Query: 86 SNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNV-------SAYFASKYGV 131
R L+ G IV SS+++ + Y +SK
Sbjct: 126 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAAC 179
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 72.9 bits (180), Expect = 3e-16
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+V++ I+ + + + G VDIL+NNAGI + ++ + E IM+ NL
Sbjct: 57 GKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLT 116
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S ++ + L M++ G I+ + S+ + Y A+K GV
Sbjct: 117 SIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGV 162
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 72.5 bits (179), Expect = 3e-16
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
V K DV + +++ + + G +DIL+NNAGI + +L ++ + + +++ NL
Sbjct: 57 VVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLK 116
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S + ML+ +G I+ I+SIA + + Y ASK G+
Sbjct: 117 SAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGL 162
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein,
NAD(P)-binding rossmann fold, csgid, oxidoreductase;
1.95A {Francisella tularensis subsp}
Length = 247
Score = 72.5 bits (179), Expect = 3e-16
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A ++SD I+ ++ +DIL+NNAGI + ++ ++ E + +++ NL
Sbjct: 56 ARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLS 115
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S +M +E + M++ G I+ I S+ + Y A+K GV
Sbjct: 116 SIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGV 161
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 72.6 bits (179), Expect = 4e-16
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
F A++SD+ IK+L E + + +DIL+NNAGI + D + + ++ VNL
Sbjct: 75 VFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLT 134
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + RE + M+ G I+ I+SI + + Y A+K G+
Sbjct: 135 AASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGL 180
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 72.6 bits (179), Expect = 4e-16
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+V+D + L E+ K G +++L+NNAGI + D E + ++D NL
Sbjct: 79 GRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLK 138
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ ++ R L M++ G IV I+S+ Y A+K GV
Sbjct: 139 AVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGV 184
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann
fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus}
SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 72.1 bits (178), Expect = 5e-16
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ F DVS +A+++ + + G +D+++NNAGI + ++ + + ++D+NL
Sbjct: 53 AITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT 112
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ M++ G I+ I+S+ L + + Y A+K GV
Sbjct: 113 GVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV 158
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 72.6 bits (179), Expect = 6e-16
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A KADVS ++E++ L V + G +D+L+NNAGI + +L + + ++D+NL
Sbjct: 80 AFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLG 139
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
R ML+ +G I+ I+S+ + Y A+K GV
Sbjct: 140 GVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGV 185
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 72.2 bits (178), Expect = 6e-16
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
++++K E L + K +DIL+ NAGI + + + D + ++++D+NL +
Sbjct: 62 YTIEVCNLANKEECSNL---ISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKA 118
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
N + RE + M++ G I+ ISSI + + Y ASK G+
Sbjct: 119 NFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGL 163
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Length = 246
Score = 72.1 bits (178), Expect = 6e-16
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A+ +ADV++ ++ + + G VDIL+NNAG+ + ++ + E + +++ NL
Sbjct: 56 AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLK 115
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ M+ G IV I+S+ +T + Y A+K GV
Sbjct: 116 GVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGV 161
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 71.4 bits (176), Expect = 9e-16
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ +A+V+D E+K + + V G +D+L+NNAGI + ++ + E + ++D NL
Sbjct: 56 SFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLK 115
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+++ P ML +G I+ +SS+ + Y A+K GV
Sbjct: 116 GVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGV 161
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 71.8 bits (177), Expect = 1e-15
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGI-VASSSVLAHTDHEIERIMDVNL 84
AV D+SD++ + L ++ +G +DIL AG A + T + ++ VN+
Sbjct: 102 AVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
+ + +E +P + + I+ SSI A + ++ Y A+K +
Sbjct: 162 FALFWITQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAATKAAIL 207
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 71.0 bits (175), Expect = 1e-15
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ DV+D + + V + G V++L++NAG+ A + ++ T+ + E++++ NL
Sbjct: 55 LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLT 114
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
++ + M N G ++ I S++ L N + Y ASK GV
Sbjct: 115 GAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGV 160
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 71.5 bits (176), Expect = 2e-15
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ + DVS K EI ++ + VDIL+NNAGI + L + E E ++ NL
Sbjct: 95 SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLN 154
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
S + + M+ N G I+ ISSI LT V + Y +SK GV
Sbjct: 155 SLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV 200
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase;
1.99A {Streptomyces coelicolor}
Length = 253
Score = 70.7 bits (174), Expect = 2e-15
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ K D++D ++++ + + + G V++LI NAG+ ++ ++ + +++ NL
Sbjct: 61 FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLT 120
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
++V+ ML G +V ISS+ L + + Y ASK G+
Sbjct: 121 GTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGL 166
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 70.6 bits (174), Expect = 2e-15
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
A + ++ + I K E + + +DIL+NNAGI L + + E ++ VNL
Sbjct: 59 AHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLT 118
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + L M++ G IV ISS+ T V Y +K G+
Sbjct: 119 GTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGL 164
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 71.7 bits (176), Expect = 3e-15
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
A + DV+ +E + + K G +DIL+NNAGI+ S + E + + V+L+
Sbjct: 371 AWPDQHDVAKDSE-AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIG 429
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ R P +E G I+ I+S + + + Y +SK G+
Sbjct: 430 TFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGI 474
Score = 70.9 bits (174), Expect = 5e-15
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
AV +V D +I + V+ G V ++INNAGI+ +S+ T+ + + ++DV+L
Sbjct: 68 AVADYNNVLDGDKI--VETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNG 125
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + P + G IV SS A L + Y ++K +
Sbjct: 126 AFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSAL 170
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 69.5 bits (171), Expect = 6e-15
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 27 AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVN 83
+ +ADV+ K ++ K+ E G +D LINNAG + E ++ N
Sbjct: 59 LQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGN 118
Query: 84 LMSNIKMVREFLPDMLENNTGHIVCIS--SIAALTAAVNVSAYFASKYGV 131
L + +++ +P M + N G I+ + + SA+ A+K G+
Sbjct: 119 LTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGL 168
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 70.0 bits (172), Expect = 6e-15
Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 21/126 (16%)
Query: 27 AVYFKADVSD----KAEIKKL-NENVRKIGYVDILINNAGI----------VASSSVLAH 71
AV +AD+++ A +++ N R G D+L+NNA +S
Sbjct: 76 AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKT 135
Query: 72 TDHEIERIMDVNLMSNIKMVREFLPDM------LENNTGHIVCISSIAALTAAVNVSAYF 125
+ ++ ++ N ++ + F ++ IV + + S Y
Sbjct: 136 VETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 195
Query: 126 ASKYGV 131
K+ +
Sbjct: 196 MGKHAL 201
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 70.1 bits (172), Expect = 6e-15
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 26 VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
VA Y V ++ + + G +D+++NNAGI+ S +D + + I V+L
Sbjct: 70 VANY--DSVEAGEKL--VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR 125
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ ++ R M + N G I+ +S + + + Y A+K G+
Sbjct: 126 GSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGL 171
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 69.5 bits (171), Expect = 7e-15
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
F+ADVS+ + L E V+ ++++ AGI +L ++ + ++++ VNL
Sbjct: 65 HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNL 124
Query: 85 MSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ + ++ N G I+ ISSI V + Y ASK GV
Sbjct: 125 KGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGV 172
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 70.2 bits (172), Expect = 9e-15
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
AV V D A++ + ++ G VDIL+NNAGI+ S++ ++ + + DV+L
Sbjct: 79 AVADYNSVIDGAKV--IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKG 136
Query: 87 NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ K + P M + N G I+ SS + + Y A+K G+
Sbjct: 137 SFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGL 181
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural genomics,
secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 68.7 bits (169), Expect = 9e-15
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 30 FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
A++ + L + +G +D L+NNAGI + ++ D + E +++ NL +
Sbjct: 57 LGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVF 116
Query: 89 KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ RE + M++ G IV I+S+ + + Y ASK G+
Sbjct: 117 RTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL 159
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 68.5 bits (168), Expect = 4e-14
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 30 FKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
DV+ + K+ +V + G VDIL+NNAGI + + + ++ VNL++
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAP 323
Query: 88 IKMVREFLPDMLENNTGHIVCISSIAALTAAVNV--SAYFASKYGV 131
++ + + G ++ +SS+A + N + Y +K G+
Sbjct: 324 QRLTEGLVGNGTIGEGGRVIGLSSMAGIAG--NRGQTNYATTKAGM 367
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 65.3 bits (160), Expect = 3e-13
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGI-VASSSVLAHTDHEIERIMDVNL 84
V D+SD+ K + E VR++G ++IL+NN + T ++E+ +N+
Sbjct: 99 CVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINI 158
Query: 85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
S + + L + + I+ +SI A + Y A+K +
Sbjct: 159 FSYFHVTKAALSHLKQG--DVIINTASIVAYEGNETLIDYSATKGAIV 204
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 64.2 bits (157), Expect = 5e-13
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 51 GYVDILINNAGIVASSSVLAH--TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC 108
+ + +N G+ A LA + + + V ++ + LP + G
Sbjct: 79 SGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEAR 138
Query: 109 ISSIAALTAAVNVSAYFASKYGVT 132
+A + AY SKY VT
Sbjct: 139 AIELAEQQGQTH-LAYAGSKYAVT 161
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 64.3 bits (157), Expect = 5e-13
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 27 AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
+ + D+ D I+ L + +R + G +D+L+NNAGI + + E M N
Sbjct: 56 PRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFF 115
Query: 86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
+ E LP + G +V +SSI ++ A + S K+
Sbjct: 116 GTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKF 157
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 63.2 bits (154), Expect = 1e-12
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 18/117 (15%)
Query: 30 FKADVSDKAEIKKLNENVRKI---GYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLM 85
+ D+ + KL ++ + +++L NNAGI S+ + + + + N +
Sbjct: 77 LEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTV 136
Query: 86 SNIKMVREFLP-----------DMLENNTGHIVCISSIA---ALTAAVNVSAYFASK 128
I + + LP + I+ +SSI + AY SK
Sbjct: 137 VPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSK 193
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 63.1 bits (154), Expect = 2e-12
Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 38/143 (26%)
Query: 27 AVYFKADVSDKAEIKKLNEN------------------VRKIGYVDILINNAGIV----- 63
A+ +AD+S+ A + G D+L+NNA
Sbjct: 62 AITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL 121
Query: 64 ---------ASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT------GHIVC 108
+ + N ++ +++ F + I+
Sbjct: 122 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIIN 181
Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
+ + + Y +K +
Sbjct: 182 MVDAMTNQPLLGYTIYTMAKGAL 204
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 63.2 bits (154), Expect = 2e-12
Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 38/143 (26%)
Query: 27 AVYFKADVSDKAEIKKLNEN------------------VRKIGYVDILINNAGIV----- 63
A+ +AD+S+ A + G D+L+NNA
Sbjct: 99 AITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL 158
Query: 64 ---------ASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT------GHIVC 108
+ + N ++ +++ F + I+
Sbjct: 159 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIIN 218
Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
+ + + Y +K +
Sbjct: 219 MVDAMTNQPLLGYTIYTMAKGAL 241
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 62.0 bits (151), Expect = 4e-12
Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 37/131 (28%)
Query: 32 ADVSDKAEIKKLNENV--RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
AD+S K+ +V + +D L+ AG+ + VL ++ VN +
Sbjct: 40 ADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVL-------GNVVSVNYFGATE 92
Query: 90 MVREFLPDMLENNTGHIVCISSIAALTAAVNV---------------------------- 121
++ FLP + + + V ISS+A+ A +
Sbjct: 93 LMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152
Query: 122 SAYFASKYGVT 132
AY SK +T
Sbjct: 153 LAYAGSKNALT 163
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 61.2 bits (149), Expect = 9e-12
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 27 AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
AV ++V+D + L V G +D+L+NNAGIV + ++ E + ++ V+L
Sbjct: 88 AVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLK 147
Query: 86 SNIKMVREFLPDM------LENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
+ +R + G I+ SS A L +V Y A+K G+
Sbjct: 148 GHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGI 199
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 60.4 bits (147), Expect = 1e-11
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 22/118 (18%)
Query: 33 DVSDKAEIKKLNENVRKI---GYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLMSNI 88
V+ + V +I + +LINNAG++ S + I +DVN S +
Sbjct: 59 TVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV 118
Query: 89 KMVREFLP-----------DMLENNTGHIVCISSIAA-------LTAAVNVSAYFASK 128
+ ++ LP D L + ++ ISS +A V AY SK
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSK 176
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 49.6 bits (118), Expect = 9e-08
Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 32/134 (23%)
Query: 27 AVYFKADVSDKAE-IKKLNENVR-KIGYVDILINNAGIVASS------------------ 66
V+ + DV+D + L + ++ G +DIL+NNAG+ S
Sbjct: 64 VVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSE 123
Query: 67 ------------SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA 114
+++ T E + +N + +P + +++ IV +SS
Sbjct: 124 ELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTG 183
Query: 115 LTAAVNVSAYFASK 128
V+
Sbjct: 184 SLKYVSNETALEIL 197
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.5 bits (86), Expect = 0.002
Identities = 21/170 (12%), Positives = 54/170 (31%), Gaps = 35/170 (20%)
Query: 30 FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
F + D +++ + +++ +D +I R+ L +
Sbjct: 29 FVDNF-DCKDVQDMPKSILSKEEIDHIIM----------SKDAVSGTLRLFWTLLSKQEE 77
Query: 90 MVREFLPDMLENNTGHIVCISSIAALT-AAVNVSAYFASKYGVTENHPSIKCFSGYMLWG 148
MV++F+ ++L N ++ S I ++ + + N + F+ Y +
Sbjct: 78 MVQKFVEEVLRINYKFLM--SPIKTEQRQPSMMTRMYIEQRDRLYNDNQV--FAKYNVSR 133
Query: 149 TTVTTPLRSVTILYQ----------------RSVLTIQLLAFDKKSKRHM 182
LR L + ++ + + + K + M
Sbjct: 134 LQPYLKLRQA--LLELRPAKNVLIDGVLGSGKTWVALDVCL-SYKVQCKM 180
Score = 35.6 bits (81), Expect = 0.007
Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 50/193 (25%)
Query: 33 DVSDKAEIKKLNENV------RKIGYVDILINNAGIVAS-----------------SSVL 69
+V + N + R D L S L
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311
Query: 70 AHTDHEI-ERIMDVNLMSNIKMVREFLPDMLE--NNTGHIVCI-------SSIAALTAAV 119
++ ++ N + ++ E + D L +N H+ C SS+ L A
Sbjct: 312 DCRPQDLPREVLTTNPRR-LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA- 369
Query: 120 NVSAYFASKYGVTENHPSI--KCFSGYMLWGTTVTT-PLRSVTILYQRSVL--------- 167
F + V I S ++W + + + V L++ S++
Sbjct: 370 EYRKMF-DRLSVFPPSAHIPTILLS--LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 168 TIQLLAFDKKSKR 180
+I + + K K
Sbjct: 427 SIPSIYLELKVKL 439
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 36.4 bits (85), Expect = 0.002
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 22/109 (20%)
Query: 33 DVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVR 92
D+ D + +++ + V D+LINNAGI+A A T E + N + + +
Sbjct: 70 DLQDLSSVRRFADGVSGA---DVLINNAGIMAVP--YALTVDGFESQIGTNHLGHFALTN 124
Query: 93 EFLPDMLENNTGHIVCISSIAALTAAVN-------------VSAYFASK 128
LP + T +V +SS+A +N AY SK
Sbjct: 125 LLLPRL----TDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSK 169
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 34.9 bits (79), Expect = 0.005
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 12/42 (28%)
Query: 36 DKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE 77
+K +KKL + K+ Y D S+ LA +E
Sbjct: 18 EKQALKKL-QASLKL-YAD---------DSAPALA-IKATME 47
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 35.4 bits (81), Expect = 0.008
Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 34/146 (23%)
Query: 11 HGILFIPWCLPTKTHVAV-----YFKADVSDKAEIKKLNEN--------VRKIGYVDILI 57
HG L +PT + F + + E ++ + +GYV L+
Sbjct: 13 HGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLV 72
Query: 58 NNAGIVASSSVLAHTDHEIER-IMDVNLMSNI-KMVREFLPDMLENNTGHIVCISSIAAL 115
+ + VL E E ++ N +I + + L + N +V +
Sbjct: 73 EPSKVGQFDQVLNLCLTEFENCYLEGN---DIHALAAKLLQE----NDTTLVKTKEL--- 122
Query: 116 TAAVNVSAYFASKY----GVTENHPS 137
+ Y ++ + S
Sbjct: 123 -----IKNYITARIMAKRPFDKKSNS 143
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 29.8 bits (67), Expect = 0.46
Identities = 10/84 (11%), Positives = 23/84 (27%), Gaps = 9/84 (10%)
Query: 32 ADVSDKAEIKKLNENVRKIGYVDILINN--AGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
A+ +D A + + + G+ + IE + D N +
Sbjct: 174 AETADDASRAEA------VKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLG 227
Query: 90 MVREFLPDMLENNTGHIVCISSIA 113
+ D + G ++
Sbjct: 228 IGGIDATDKGK-EYGGKRAFGALG 250
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural
genomics, NPPSFA, national P protein structural and
functional analyses; 2.10A {Aeropyrum pernix}
Length = 186
Score = 29.0 bits (66), Expect = 0.56
Identities = 4/24 (16%), Positives = 13/24 (54%)
Query: 44 NENVRKIGYVDILINNAGIVASSS 67
++++I ++ L+ G++ S
Sbjct: 68 LRHLKRIAWIARLLARNGVIVICS 91
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase,
transferase, sulfate metabolism, nucleotide 2 kinase;
2.95A {Thiobacillus denitrificans}
Length = 552
Score = 28.7 bits (64), Expect = 1.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 44 NENVRKIGYVDILINNAGIVASSSVLA 70
+ NVR+IG+V I +A + +A
Sbjct: 425 DVNVRRIGFVASEITKNRGIAICAPIA 451
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1
(PAPS synthetase...; NMP-kinase fold, protein in
complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo
sapiens} PDB: 2pey_A* 2ax4_A*
Length = 179
Score = 27.9 bits (63), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 44 NENVRKIGYVDILINNAGIVASSSV 68
ENVR+I V L +AG+V +S
Sbjct: 60 EENVRRIAEVAKLFADAGLVCITSF 84
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met
nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A
{Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A*
1m7h_A* 3cr7_A*
Length = 211
Score = 28.0 bits (63), Expect = 1.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 44 NENVRKIGYVDILINNAGIVASSS 67
NEN+R+I V L ++ +A +S
Sbjct: 81 NENIRRIAEVAKLFADSNSIAITS 104
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold,
transferase-transferase complex; HET: ADX ANP; 1.79A
{Arabidopsis thaliana} PDB: 4fxp_A*
Length = 200
Score = 27.6 bits (62), Expect = 2.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 44 NENVRKIGYVDILINNAGIVASSS 67
EN+R++G V L +AGI+ +S
Sbjct: 80 AENIRRVGEVAKLFADAGIICIAS 103
>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
SCOP: a.5.2.4
Length = 71
Score = 26.0 bits (57), Expect = 2.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 79 IMDVNLMSNIKMVREFLPDM 98
+ V L S I V++ LPD+
Sbjct: 8 MCGVELDSLISQVKDLLPDL 27
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP;
2.31A {Aquifex aeolicus}
Length = 546
Score = 27.2 bits (60), Expect = 3.9
Identities = 5/39 (12%), Positives = 17/39 (43%)
Query: 44 NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDV 82
N+ ++G+V I V ++++ ++ ++
Sbjct: 427 ITNILRVGFVASEIVKHNGVVICALVSPYRSARNQVRNM 465
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1,
oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium
frigidimaris}
Length = 312
Score = 26.5 bits (59), Expect = 4.8
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 13/86 (15%)
Query: 29 YFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
+ + D +I+ L E + + + A ++ S A + D+N+ S
Sbjct: 49 FEVVNALDFNQIEHLVEVHK----ITDIYLMAALL---SATAEKNPAFA--WDLNMNSLF 99
Query: 89 KMVREFLPDMLENNTGHIVCISSIAA 114
+ L I SSIA
Sbjct: 100 HV----LNLAKAKKIKKIFWPSSIAV 121
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding,
T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP:
b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Length = 573
Score = 26.9 bits (59), Expect = 4.8
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 44 NENVRKIGYVDILINNAGIVASSSVLA 70
+ N+++I +V + AG ++ +A
Sbjct: 452 HTNIQRIAFVATELTRAGAAVIAAPIA 478
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1;
transferase, ATP sulfurylase, APS kinase, PAPS; HET:
ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5
c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Length = 630
Score = 26.7 bits (59), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 44 NENVRKIGYVDILINNAGIVASSSVLA 70
ENVR+I V L +AG+V +S ++
Sbjct: 107 EENVRRIAEVAKLFADAGLVCITSFIS 133
>3bqk_A Pfemp1 protein, erythrocyte membrane protein 1; malaria, pregnancy,
VAR2CSA encoded pfemp1 protein, DBL3X DO chondroitin
sulphate A; 1.80A {Plasmodium falciparum} PDB: 3bqi_A
3bql_A 3cml_A 3cpz_A
Length = 360
Score = 26.1 bits (57), Expect = 7.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 33 DVSDKAEIKKLNENVRKI 50
V+ I KL E+++KI
Sbjct: 145 SVNIYEHIGKLQEDIKKI 162
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.133 0.391
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,663,730
Number of extensions: 149597
Number of successful extensions: 892
Number of sequences better than 10.0: 1
Number of HSP's gapped: 549
Number of HSP's successfully gapped: 208
Length of query: 182
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 94
Effective length of database: 4,244,745
Effective search space: 399006030
Effective search space used: 399006030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (24.4 bits)