Query psy5464
Match_columns 481
No_of_seqs 150 out of 190
Neff 4.2
Searched_HMMs 29240
Date Fri Aug 16 18:15:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5464.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5464hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4igg_A Catenin alpha-1; asymme 100.0 3.5E-74 1.2E-78 635.6 41.9 328 61-480 7-351 (832)
2 3rf3_A Vinculin, metavinculin; 100.0 2.2E-59 7.4E-64 458.9 22.7 214 19-266 3-254 (258)
3 1dow_A Alpha-catenin; four-hel 100.0 9.9E-54 3.4E-58 407.1 23.7 174 55-261 1-204 (205)
4 1tr2_A Vinculin isoform 1; act 100.0 6.1E-45 2.1E-49 411.6 41.9 274 19-331 3-330 (1066)
5 4ehp_B Catenin alpha-1; adhere 100.0 4E-36 1.4E-40 261.6 8.2 107 265-371 4-111 (111)
6 4ehp_B Catenin alpha-1; adhere 99.8 4.3E-22 1.5E-26 173.5 6.0 66 380-445 17-83 (111)
7 4e18_B Catenin alpha-1; four h 99.8 1.1E-20 3.7E-25 147.7 5.6 58 288-345 2-59 (59)
8 4e18_B Catenin alpha-1; four h 99.8 1.1E-20 3.8E-25 147.6 5.5 56 390-445 2-57 (59)
9 4e17_B Catenin alpha-1; four h 99.5 6.1E-15 2.1E-19 107.1 4.1 39 307-345 2-40 (40)
10 4e17_B Catenin alpha-1; four h 99.5 1.2E-14 4.2E-19 105.5 3.9 36 410-445 3-38 (40)
11 4igg_A Catenin alpha-1; asymme 99.5 8.2E-12 2.8E-16 139.1 26.4 224 206-446 2-274 (832)
12 1tr2_A Vinculin isoform 1; act 98.1 0.032 1.1E-06 64.0 41.9 263 199-480 417-707 (1066)
13 1h6g_A Alpha-1 catenin; adhesi 97.6 0.00015 5.3E-09 70.6 8.8 109 366-480 1-120 (256)
14 1h6g_A Alpha-1 catenin; adhesi 96.3 0.28 9.7E-06 47.6 18.8 151 59-242 70-230 (256)
15 3dyj_A Talin-1; helix bundles, 95.2 3.1 0.00011 42.3 24.4 90 318-442 236-326 (332)
16 2x0c_A Talin-1; cytoskeleton, 91.3 13 0.00044 37.3 19.8 156 58-232 119-302 (309)
17 2l7a_A Talin-1; vinculin, bund 88.9 5.9 0.0002 35.3 12.1 75 138-245 34-108 (131)
18 1u89_A Talin 1, talin; 4-helix 86.9 8.5 0.00029 34.7 12.0 71 138-241 64-134 (139)
19 3dyj_A Talin-1; helix bundles, 83.2 43 0.0015 34.1 24.9 162 76-246 132-307 (332)
20 3fyq_A CG6831-PA (talin); 5-he 70.6 69 0.0024 30.5 12.9 118 312-478 39-158 (199)
21 1sj8_A Talin 1; structural pro 62.4 1.4E+02 0.0046 30.2 21.3 52 59-113 92-143 (308)
22 2l10_A Talin-1; helical bundle 59.2 1.1E+02 0.0036 28.0 16.3 91 141-231 63-154 (158)
23 2y39_A Nickel and cobalt resis 56.8 37 0.0013 29.8 7.7 53 317-379 38-90 (118)
24 3rf3_A Vinculin, metavinculin; 55.7 1.5E+02 0.0052 28.7 17.2 150 182-339 43-208 (258)
25 3f31_A Spectrin alpha chain, b 52.5 1.1E+02 0.0038 26.2 10.4 24 457-480 115-138 (149)
26 2l7a_A Talin-1; vinculin, bund 44.6 51 0.0017 29.3 6.7 37 75-111 88-124 (131)
27 1u89_A Talin 1, talin; 4-helix 42.7 1.9E+02 0.0064 26.0 11.7 30 411-441 94-123 (139)
28 2l10_A Talin-1; helical bundle 40.6 1E+02 0.0034 28.2 8.2 36 77-112 116-151 (158)
29 3lbx_A Spectrin alpha chain, e 38.4 97 0.0033 27.2 7.7 24 457-480 125-148 (161)
30 4f7g_B Talin-1; alpha-helix bu 36.0 2.7E+02 0.0091 26.6 10.7 36 203-239 120-156 (216)
31 3qb5_K Translin-associated pro 34.2 2.5E+02 0.0086 27.6 10.6 98 315-418 49-146 (290)
32 2kvp_A Talin-1; VBS, vinculin, 33.0 2.9E+02 0.0099 25.3 11.3 138 58-227 18-157 (165)
33 3gwk_C SAG1039, putative uncha 32.7 73 0.0025 25.1 5.4 58 319-376 24-83 (98)
34 2x0c_A Talin-1; cytoskeleton, 32.3 3.9E+02 0.013 26.6 21.7 151 171-340 103-267 (309)
35 2kvp_A Talin-1; VBS, vinculin, 30.6 1.3E+02 0.0045 27.6 7.3 46 67-112 108-157 (165)
36 2iak_A Bullous pemphigoid anti 29.8 3.1E+02 0.011 24.7 10.2 24 457-480 190-213 (224)
37 1qkr_A Vinculin, tail domain; 29.2 3.6E+02 0.012 25.2 10.4 78 297-375 79-160 (188)
38 3axj_B TRAX, translin associat 28.7 1.9E+02 0.0065 28.6 8.7 92 315-410 44-135 (298)
39 2ke4_A CDC42-interacting prote 28.2 1.6E+02 0.0056 24.7 6.9 44 329-373 37-80 (98)
40 2b0h_A Talin-1; vinculin, heli 27.7 1.7E+02 0.0058 26.1 7.3 52 61-112 74-129 (137)
41 3fyq_A CG6831-PA (talin); 5-he 27.2 4.1E+02 0.014 25.2 12.8 87 91-202 43-133 (199)
42 2vs0_A Virulence factor ESXA; 26.6 1.1E+02 0.0039 23.5 5.5 58 319-376 22-81 (97)
43 1sj7_A Talin 1; structural pro 25.5 1.9E+02 0.0064 27.0 7.4 52 59-113 92-143 (174)
44 3zbh_A ESXA; unknown function, 21.7 97 0.0033 24.1 4.2 57 319-375 25-83 (99)
45 4ioe_A Secreted protein ESXB; 20.8 1.3E+02 0.0043 23.3 4.7 57 319-375 25-83 (93)
No 1
>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}
Probab=100.00 E-value=3.5e-74 Score=635.57 Aligned_cols=328 Identities=59% Similarity=0.822 Sum_probs=314.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHhc
Q psy5464 61 AAVEKATENFIERGDAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLLILADMVDVHLLLKSLRVVEDDLEKVKNA 140 (481)
Q Consensus 61 ~aV~~A~enfv~~G~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlLilaD~vdV~~il~~~~~v~~~l~~~~~~ 140 (481)
+-.-.|.+..-..|+.|..||++|.+||||+++|+.||+|||+||++||||||||||+||++||.++++|+++|++++++
T Consensus 7 ~eM~~A~~~v~~ag~~l~~aa~~l~~DP~s~~~R~~lV~aAR~LLs~vTrLLllaD~~~VrkIi~~~~~Vl~~L~~le~v 86 (832)
T 4igg_A 7 EELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNA 86 (832)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44556788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhhhHHHHHHHHhhccCCCCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcCChhHHHHHHHHHHHH
Q psy5464 141 SSQGELLDNIKAFGRNATELMAQAAKHGAEGSSATQGELLDNIKAFGRNATELMAQAAKRQMELKDPQLRDDLAAARAIL 220 (481)
Q Consensus 141 ~s~~el~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLkd~~~r~~l~aar~~L 220 (481)
+|++||+++|++|| ++|++|++++++||+|||||.+|++|++||++|
T Consensus 87 ~s~~eLv~~f~~f~---------------------------------~~m~eL~~lt~~Rq~dLk~~~~R~~L~aAr~~L 133 (832)
T 4igg_A 87 GNEQDLGIQYKALK---------------------------------PEVDKLNIMAAKRQQELKDVGHRDQMAAARGIL 133 (832)
T ss_dssp CSHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 99999999999999 999999999999999999999999999999999
Q ss_pred HHhhHHHHHhhhhhhcCCCcHHHHHHHHhhHhhh-----hHhHhhccCc----------hH-HHHHHHHHHHHhhccCcc
Q psy5464 221 KKHSTMLLTASKVYVRHPELAAAKENRNFVLGTT-----GFFTLAVTSL----------KK-RSVSLLHQVYERMVMDPL 284 (481)
Q Consensus 221 kk~~~mL~ta~k~~~rhp~~~~a~~nR~~v~~~~-----~i~~~~~~~~----------~~-~~~~~l~~~~~~~~~dp~ 284 (481)
|+++||||||||+|++||++++|++||||||++| .|..++|+.. .| .++++|++|+++++|+|+
T Consensus 134 k~~spmLlta~Kt~lrhp~~~~A~~nRd~v~~qm~~al~~Ii~vlq~~~~~e~~~~~~~~g~~l~~al~~~~~~i~~~p~ 213 (832)
T 4igg_A 134 QKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDASQHQGGGGGELAYALNNFDKQIIVDPL 213 (832)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCSTTTTCCSSCSCHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchHHHHHHHHHHHHHHHhcCcc
Confidence 9999999999999999999999999999999999 4667777531 24 699999999999999999
Q ss_pred cccc-cccccHHHHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHH
Q psy5464 285 AYNE-RVRPSLEERLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLLSEYMANMSIKDPSEGLERAIDHMCRK 363 (481)
Q Consensus 285 ~~~~-~~r~~Le~~Le~Iis~a~~~aDs~~Tr~~rRerIvaeCn~lRqaLqdLLseym~n~g~k~~se~Le~AI~~m~kk 363 (481)
+|.+ ++||+|+++|+.||+|+++||||+||+|+||++||++|+++|++|++|+++||+++|.++.+++++.+|++|+++
T Consensus 214 ~~~e~~~r~~L~~~Le~iv~~a~~~aDs~~t~~~~Re~Iv~~C~~vrq~L~dLl~~~~~~~g~~~~s~~l~~ai~~l~~k 293 (832)
T 4igg_A 214 SFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKK 293 (832)
T ss_dssp SSCCSSHHHHHHHHHHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCSCCHHHHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChHHHHHHHHHHHH
Confidence 9998 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhhcCccccccccccchHHHHHHHhhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5464 364 TRDLRRQLRKAVVDHERMVMDPLAYNERVRPSLEERLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLLSDFM 443 (481)
Q Consensus 364 trDLRRqLrkAavDhV~~~~dpl~~~~~~r~~Le~~Le~ii~g~a~~ADsa~Tr~e~rE~Iv~~Cn~lRqaLqdLlsey~ 443 (481)
|+||||+|++|++||| +| .|.
T Consensus 294 ~~dL~r~L~~Avvdqv-------------------------------sD----------------------------~F~ 314 (832)
T 4igg_A 294 TRDLRRQLRKAVMDHV-------------------------------SD----------------------------SFL 314 (832)
T ss_dssp HHHHHHHHHHHHHHHH-------------------------------HH----------------------------HTS
T ss_pred HHHHHHHHHHHHHHHH-------------------------------HH----------------------------HHH
Confidence 9999999999999999 66 688
Q ss_pred hcchhHHHHHHHHhcCCHHHHHHHHHHHHHHHhHhhh
Q psy5464 444 ETDIPILVLIEAARSGNEKEVEKAAENFADHANKLVE 480 (481)
Q Consensus 444 ~~~~~l~~l~~aA~~g~~~~~~e~~~~f~e~~~~Lve 480 (481)
.++.||.+|+.||..||++.+++|++.|+||+++|+|
T Consensus 315 dt~~pL~~Li~Aa~~g~ee~~~e~a~~F~eha~~lve 351 (832)
T 4igg_A 315 ETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIE 351 (832)
T ss_dssp SSSHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCchHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987
No 2
>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 4e17_A 4e18_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A ...
Probab=100.00 E-value=2.2e-59 Score=458.93 Aligned_cols=214 Identities=23% Similarity=0.336 Sum_probs=202.8
Q ss_pred cceehhhhhhhhHHhhhhhhhcccCCCCcccCCcchhh-hhHHHHHHHHHHHHHHhh-----------------------
Q psy5464 19 EIRTMSVEKTLEPLVLQVTTLVNTKGPSKKKKGRSKRA-HVLVAAVEKATENFIERG----------------------- 74 (481)
Q Consensus 19 EIrtksVE~~LePLv~QVTtLVn~k~~~~k~~g~s~~a-~~~~~aV~~A~enfv~~G----------------------- 74 (481)
-||||+||++|+||++|||||||+++++. ++|++++. ++++++|+.|++||+++|
T Consensus 3 ~~~TksvE~iL~Pl~~qVttLV~~~e~~~-~~g~~~~~~~~~~~aV~~Av~nfv~vG~~ia~~~ed~~lk~eM~~A~~~v 81 (258)
T 3rf3_A 3 VFHTRTIESILEPVAQQISHLVIMHEEGE-VDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKV 81 (258)
T ss_dssp CCSBHHHHHHHTTHHHHHHHHHHHTSSSC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhcccccc-ccCCCccchHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 58999999999999999999999977664 57888555 899999999999999999
Q ss_pred ----HHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHhcCChHHHHHHH
Q psy5464 75 ----DAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLLILADMVDVHLLLKSLRVVEDDLEKVKNASSQGELLDNI 150 (481)
Q Consensus 75 ----~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlLilaD~vdV~~il~~~~~v~~~l~~~~~~~s~~el~~~~ 150 (481)
+.|..|+++|.+||||+++|+.||+|||+||++||||||+|||+||++|+..+++|+++|+++++++|++||+++|
T Consensus 82 ~~ag~~l~~aa~~~~~dP~s~~~R~~lV~aAR~lLs~vtrlLllaD~~dVr~il~~~~~v~~~l~~l~~~~~~~el~~~~ 161 (258)
T 3rf3_A 82 ENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYT 161 (258)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 3577888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHhhccCCCCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHhhHHHHHh
Q psy5464 151 KAFGRNATELMAQAAKHGAEGSSATQGELLDNIKAFGRNATELMAQAAKRQMELKDPQLRDDLAAARAILKKHSTMLLTA 230 (481)
Q Consensus 151 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLkd~~~r~~l~aar~~Lkk~~~mL~ta 230 (481)
++|| ++|.+|++++++||+|||||.+|++|++||++||+++||||||
T Consensus 162 ~~f~---------------------------------~~~~~L~~~~~~Rq~eL~~~~~r~~l~~Ar~~Lk~~~p~L~ta 208 (258)
T 3rf3_A 162 KNLG---------------------------------PGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISA 208 (258)
T ss_dssp HHHH---------------------------------HHHHHHHHHHHHHHTTBSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH---------------------------------HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999999999999999999999999999
Q ss_pred hhhhhcC-----CCcHHHHHHHHhhHhhh-----hHhHhhccCchH
Q psy5464 231 SKVYVRH-----PELAAAKENRNFVLGTT-----GFFTLAVTSLKK 266 (481)
Q Consensus 231 ~k~~~rh-----p~~~~a~~nR~~v~~~~-----~i~~~~~~~~~~ 266 (481)
||+|++| |++++|++||||||++| .|.+++|+.+|+
T Consensus 209 ~k~~lrh~~~~~~~~~~a~~nRd~v~~~m~~al~~I~~vlq~~~~~ 254 (258)
T 3rf3_A 209 MKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254 (258)
T ss_dssp HHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHhccCCCCCCcHHHHHhHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 9999999 99999999999999999 577888876543
No 3
>1dow_A Alpha-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} SCOP: a.24.9.1 PDB: 1dov_A
Probab=100.00 E-value=9.9e-54 Score=407.13 Aligned_cols=174 Identities=56% Similarity=0.749 Sum_probs=166.8
Q ss_pred hhhhHHHHHHHHHHHHHHhh-------------------------HHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHH
Q psy5464 55 RAHVLVAAVEKATENFIERG-------------------------DAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVT 109 (481)
Q Consensus 55 ~a~~~~~aV~~A~enfv~~G-------------------------~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vt 109 (481)
+|++++++|++||+|||++| +.|..++++|.+||||+++|+.||+|||+||+|||
T Consensus 1 ~~~~l~~aV~~Av~nfv~vG~~ia~e~~~lk~dM~~A~~~v~~ag~~l~~a~~~~~~dP~s~~~R~~lV~aaR~lLs~vt 80 (205)
T 1dow_A 1 KAHVLAASVEQATENFLEKGDKIAKESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVT 80 (205)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHH
Confidence 46899999999999999999 35667778899999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhHHHHHHHHHHhcCChHHHHHHHHHhhhhHHHHHHHHhhccCCCCccchhhhhhhhhhhhhh
Q psy5464 110 RLLILADMVDVHLLLKSLRVVEDDLEKVKNASSQGELLDNIKAFGRNATELMAQAAKHGAEGSSATQGELLDNIKAFGRN 189 (481)
Q Consensus 110 rlLilaD~vdV~~il~~~~~v~~~l~~~~~~~s~~el~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (481)
||||||||+||++|++++++|+++|+++++++|++||+++|++|| ++
T Consensus 81 rlLllaD~~~Vrkil~~~~~v~~~L~~le~~~s~~el~~~f~~f~---------------------------------~~ 127 (205)
T 1dow_A 81 RLLILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALK---------------------------------PE 127 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHH---------------------------------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHh---------------------------------HH
Confidence 999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHhhHHHHHhhhhhhcCCCcHHHHHHHHhhHhhh-----hHhHhhc
Q psy5464 190 ATELMAQAAKRQMELKDPQLRDDLAAARAILKKHSTMLLTASKVYVRHPELAAAKENRNFVLGTT-----GFFTLAV 261 (481)
Q Consensus 190 ~~~l~~~~~~Rq~dLkd~~~r~~l~aar~~Lkk~~~mL~ta~k~~~rhp~~~~a~~nR~~v~~~~-----~i~~~~~ 261 (481)
|.+|++++++||+|||||.+||+|++||++||+++||||||||+||+||++++|++||||||++| .|.+++|
T Consensus 128 m~~l~~l~~~Rq~dLk~~~~rd~l~aAr~~Lk~~sp~L~ta~k~~lrhp~~~~a~~nRd~v~~qm~~al~~I~~v~q 204 (205)
T 1dow_A 128 VDKLNIMAAKRQQELKDVGNRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQ 204 (205)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 4666665
No 4
>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A
Probab=100.00 E-value=6.1e-45 Score=411.57 Aligned_cols=274 Identities=22% Similarity=0.330 Sum_probs=242.3
Q ss_pred cceehhhhhhhhHHhhhhhhhcccCCCCcccCCcchhh-hhHHHHHHHHHHHHHHhh-----------------------
Q psy5464 19 EIRTMSVEKTLEPLVLQVTTLVNTKGPSKKKKGRSKRA-HVLVAAVEKATENFIERG----------------------- 74 (481)
Q Consensus 19 EIrtksVE~~LePLv~QVTtLVn~k~~~~k~~g~s~~a-~~~~~aV~~A~enfv~~G----------------------- 74 (481)
.||||+||++|+||++|||||||+++... +.|+.+|+ ..++.+|..|++|||++|
T Consensus 3 ~~~t~~iE~~l~p~~~qvt~Lv~~~e~~~-~~~~~~~~l~~~~~aV~~A~~~LV~~g~~~A~~~~D~~lk~~m~~A~~~v 81 (1066)
T 1tr2_A 3 VFHTRTIESILEPVAQQISHLVIMHEEGE-VDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKV 81 (1066)
T ss_dssp CCCBHHHHHHHHHHHHHHHHHHHHHHHHH-TSSSCCCCCTTHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhhhc-ccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 79999999999999999999999987653 46777787 678999999999999999
Q ss_pred ----HHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHhcCChHHHHHHH
Q psy5464 75 ----DAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLLILADMVDVHLLLKSLRVVEDDLEKVKNASSQGELLDNI 150 (481)
Q Consensus 75 ----~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlLilaD~vdV~~il~~~~~v~~~l~~~~~~~s~~el~~~~ 150 (481)
..|..+++.|..||+++.+|+.||+|||+||++|++||+++|+++|++|+..+++|+++|+.++++++++||+++|
T Consensus 82 ~~a~s~L~~aak~l~~dp~s~~~r~~Li~aAR~vl~sv~~LL~~~D~a~v~kl~~a~~~v~~~L~~~~~~~~~~elv~~~ 161 (1066)
T 1tr2_A 82 ENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYT 161 (1066)
T ss_dssp HHHHTTHHHHHHHHHHCTTCTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 1266667888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHhhccCCCCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHhhHHHHHh
Q psy5464 151 KAFGRNATELMAQAAKHGAEGSSATQGELLDNIKAFGRNATELMAQAAKRQMELKDPQLRDDLAAARAILKKHSTMLLTA 230 (481)
Q Consensus 151 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLkd~~~r~~l~aar~~Lkk~~~mL~ta 230 (481)
|.|| ++|.+|.+.+++||+||+||.+|++|.+|+..|++++|||++|
T Consensus 162 k~l~---------------------------------~~m~~l~~~~~~r~~~l~d~~~r~~L~~A~~~L~~~~~~L~~a 208 (1066)
T 1tr2_A 162 KNLG---------------------------------PGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISA 208 (1066)
T ss_dssp HHHH---------------------------------HHHHHHHHHHHHHHHTBSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH---------------------------------HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999 9999999999999999999999999999999999999999999
Q ss_pred hhhhhc--C---CCcHHHHHHHHhhHhhh-----hHhHhhccCch----------HHHHHHHHHHHHhhc------cCcc
Q psy5464 231 SKVYVR--H---PELAAAKENRNFVLGTT-----GFFTLAVTSLK----------KRSVSLLHQVYERMV------MDPL 284 (481)
Q Consensus 231 ~k~~~r--h---p~~~~a~~nR~~v~~~~-----~i~~~~~~~~~----------~~~~~~l~~~~~~~~------~dp~ 284 (481)
+|+|++ | |++++|++||+|++++| .|..++|...+ ..+...+..|.+.+. .+|.
T Consensus 209 ~k~~~~~~~~~~~~~~~A~~~r~~~~~~~~~a~~~Ii~a~q~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~p~ 288 (1066)
T 1tr2_A 209 MKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPS 288 (1066)
T ss_dssp HHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCSSSHHHHHHHHHHHHHHHHHTTHHHHHHHHSCSS
T ss_pred HHHHHcCCCCCCcccHHHHHhhhHHHHHHHHHHHHHHHHHhcCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999 6 89999999999999999 46667763211 236678888887664 6676
Q ss_pred cccccccccHHHHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHH
Q psy5464 285 AYNERVRPSLEERLESIISGAALMADSNCTRDDRRERIVAECNAVRQ 331 (481)
Q Consensus 285 ~~~~~~r~~Le~~Le~Iis~a~~~aDs~~Tr~~rRerIvaeCn~lRq 331 (481)
..++..+ +.++..+|+.+..++++ |.|..|++|...|+.+.+
T Consensus 289 a~p~~~~---~~a~r~~i~~a~~~a~~--~~p~~~~~~~~l~~~l~~ 330 (1066)
T 1tr2_A 289 ASPGDAG---EQAIRQILDEAGKVGEL--CAGKERREILGTCKMLGQ 330 (1066)
T ss_dssp CCTTSHH---HHHHHHHHHHHHHHHTT--SCHHHHHHHHHHHHHHHH
T ss_pred cCCcchh---HHHHHHHHHHHHHHHHh--cCcccHHHHHHHHHHHHH
Confidence 6444444 45889999999999975 457889999999987655
No 5
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=261.61 Aligned_cols=107 Identities=68% Similarity=0.987 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHHhhccCcccccc-cccccHHHHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy5464 265 KKRSVSLLHQVYERMVMDPLAYNE-RVRPSLEERLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLLSEYMAN 343 (481)
Q Consensus 265 ~~~~~~~l~~~~~~~~~dp~~~~~-~~r~~Le~~Le~Iis~a~~~aDs~~Tr~~rRerIvaeCn~lRqaLqdLLseym~n 343 (481)
.|++.++|++|+++++|+|+.|++ ++||+||++||+||+||++||||+||||+|||+||++||++||+|||||++||+|
T Consensus 4 ~g~l~~ai~~F~~~i~~~pl~~~~~~~r~~Lee~LE~Iisgaa~~aDS~~Tr~e~RerIv~eCnavRqaLQdLlseym~~ 83 (111)
T 4ehp_B 4 GSELAYALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGN 83 (111)
T ss_dssp ---------------CCCHHHHHHHSSSCCHHHHHHHHHHHHTCSCCCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhhhhcCcccccccccchhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467889999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHHHHHhHHHHHHH
Q psy5464 344 MSIKDPSEGLERAIDHMCRKTRDLRRQL 371 (481)
Q Consensus 344 ~g~k~~se~Le~AI~~m~kktrDLRRqL 371 (481)
+|+|+++++||+||++||+||+||||||
T Consensus 84 ~g~ke~se~L~~aI~km~~kt~dLrRqL 111 (111)
T 4ehp_B 84 AGRKERSDALNSAIDKMTKKTRDLRRQL 111 (111)
T ss_dssp GCCCCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccccchhHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999996
No 6
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=99.85 E-value=4.3e-22 Score=173.52 Aligned_cols=66 Identities=80% Similarity=1.232 Sum_probs=62.3
Q ss_pred hhhcCcccccc-ccccchHHHHHHHhhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5464 380 RMVMDPLAYNE-RVRPSLEERLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLLSDFMET 445 (481)
Q Consensus 380 ~~~~dpl~~~~-~~r~~Le~~Le~ii~g~a~~ADsa~Tr~e~rE~Iv~~Cn~lRqaLqdLlsey~~~ 445 (481)
+++|+|+.|++ ++||+||++||+||+|+++||||+||||+|||+||++||++||||||||++||+.
T Consensus 17 ~i~~~pl~~~~~~~r~~Lee~LE~Iisgaa~~aDS~~Tr~e~RerIv~eCnavRqaLQdLlseym~~ 83 (111)
T 4ehp_B 17 QIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGN 83 (111)
T ss_dssp --CCCHHHHHHHSSSCCHHHHHHHHHHHHTCSCCCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred hhhcCcccccccccchhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46799999985 9999999999999999999999999999999999999999999999999999976
No 7
>4e18_B Catenin alpha-1; four helix bundle, cell adhesion; 2.40A {Mus musculus}
Probab=99.81 E-value=1.1e-20 Score=147.71 Aligned_cols=58 Identities=88% Similarity=1.188 Sum_probs=44.6
Q ss_pred ccccccHHHHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy5464 288 ERVRPSLEERLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLLSEYMANMS 345 (481)
Q Consensus 288 ~~~r~~Le~~Le~Iis~a~~~aDs~~Tr~~rRerIvaeCn~lRqaLqdLLseym~n~g 345 (481)
+++||+||++||+||+||+++|||+|||++||++||++||++||+|||||++||+|+|
T Consensus 2 ~~~r~~Lee~le~Iisgaa~~Ads~~tr~~rke~Iv~eCnavrqALQdLlsEY~~~~g 59 (59)
T 4e18_B 2 GIQRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAG 59 (59)
T ss_dssp CCCCCCHHHHHHHHHHHCC----------CHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred CccchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 3789999999999999999999999999999999999999999999999999999865
No 8
>4e18_B Catenin alpha-1; four helix bundle, cell adhesion; 2.40A {Mus musculus}
Probab=99.81 E-value=1.1e-20 Score=147.60 Aligned_cols=56 Identities=86% Similarity=1.184 Sum_probs=44.2
Q ss_pred cccccchHHHHHHHhhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5464 390 ERVRPSLEERLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLLSDFMET 445 (481)
Q Consensus 390 ~~~r~~Le~~Le~ii~g~a~~ADsa~Tr~e~rE~Iv~~Cn~lRqaLqdLlsey~~~ 445 (481)
+++||+||++||.||+|++++||++|||++||||||++||+|||||||||+|||+.
T Consensus 2 ~~~r~~Lee~le~Iisgaa~~Ads~~tr~~rke~Iv~eCnavrqALQdLlsEY~~~ 57 (59)
T 4e18_B 2 GIQRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGN 57 (59)
T ss_dssp CCCCCCHHHHHHHHHHHCC----------CHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CccchhHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 47999999999999999999999999999999999999999999999999999975
No 9
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=99.52 E-value=6.1e-15 Score=107.11 Aligned_cols=39 Identities=82% Similarity=1.170 Sum_probs=27.9
Q ss_pred hhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy5464 307 LMADSNCTRDDRRERIVAECNAVRQALQDLLSEYMANMS 345 (481)
Q Consensus 307 ~~aDs~~Tr~~rRerIvaeCn~lRqaLqdLLseym~n~g 345 (481)
.||||+|||++|||+||++||++||+|||||++||+|+|
T Consensus 2 ~~Ads~~tr~~rkerIv~eCnavrqALQdLlseY~~~~g 40 (40)
T 4e17_B 2 GIQDSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAG 40 (40)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 479999999999999999999999999999999999865
No 10
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=99.49 E-value=1.2e-14 Score=105.49 Aligned_cols=36 Identities=81% Similarity=1.235 Sum_probs=27.6
Q ss_pred hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5464 410 MADSNCTRDDRRERIVAECNAVRQALQDLLSDFMET 445 (481)
Q Consensus 410 ~ADsa~Tr~e~rE~Iv~~Cn~lRqaLqdLlsey~~~ 445 (481)
+||++|||++||||||++||+|||||||||+|||+.
T Consensus 3 ~Ads~~tr~~rkerIv~eCnavrqALQdLlseY~~~ 38 (40)
T 4e17_B 3 IQDSSCTRDDRRERIVAECNAVRQALQDLLSEYMGN 38 (40)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 599999999999999999999999999999999964
No 11
>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}
Probab=99.47 E-value=8.2e-12 Score=139.11 Aligned_cols=224 Identities=32% Similarity=0.467 Sum_probs=132.6
Q ss_pred ChhHHHHHHHHHHHHHHhhHHHHHhhhhhhcCCCcHHHHH-----HHHhhHhhhh---HhH-------------------
Q psy5464 206 DPQLRDDLAAARAILKKHSTMLLTASKVYVRHPELAAAKE-----NRNFVLGTTG---FFT------------------- 258 (481)
Q Consensus 206 d~~~r~~l~aar~~Lkk~~~mL~ta~k~~~rhp~~~~a~~-----nR~~v~~~~~---i~~------------------- 258 (481)
+|..+++|-.|-.-+++.+..|..++..+..+|....++. .|..+-+.+. +++
T Consensus 2 ~~~Lk~eM~~A~~~v~~ag~~l~~aa~~l~~DP~s~~~R~~lV~aAR~LLs~vTrLLllaD~~~VrkIi~~~~~Vl~~L~ 81 (832)
T 4igg_A 2 SQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGIL 81 (832)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888888888888888888888888888776543 4443333321 111
Q ss_pred -hhccCchHHHHHHHHHHHHhhc-cCccc------c-cccccccHHHHHHHHHHHHHh-h-hhcCCCChhhHHHHH----
Q psy5464 259 -LAVTSLKKRSVSLLHQVYERMV-MDPLA------Y-NERVRPSLEERLESIISGAAL-M-ADSNCTRDDRRERIV---- 323 (481)
Q Consensus 259 -~~~~~~~~~~~~~l~~~~~~~~-~dp~~------~-~~~~r~~Le~~Le~Iis~a~~-~-aDs~~Tr~~rRerIv---- 323 (481)
+-..+...++...+.+|-..|. ..-+. + ++..|..|......+-..+.. + +-..|-+|..-+...
T Consensus 82 ~le~v~s~~eLv~~f~~f~~~m~eL~~lt~~Rq~dLk~~~~R~~L~aAr~~Lk~~spmLlta~Kt~lrhp~~~~A~~nRd 161 (832)
T 4igg_A 82 KLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRD 161 (832)
T ss_dssp HHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 0111233445555555554442 00000 0 112333343333322221111 1 111122222222222
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-C----CCCCCc-hHHHHHHHHHHHhHHHHHHHHHHHHhhhhhhcCcccccc-ccccch
Q psy5464 324 AECNAVRQALQDLLSEYMANM-S----IKDPSE-GLERAIDHMCRKTRDLRRQLRKAVVDHERMVMDPLAYNE-RVRPSL 396 (481)
Q Consensus 324 aeCn~lRqaLqdLLseym~n~-g----~k~~se-~Le~AI~~m~kktrDLRRqLrkAavDhV~~~~dpl~~~~-~~r~~L 396 (481)
-.+++++.+|..++..-.+.. + ..+... .|- ..++.|..+ +.++|+.|.+ ++|+.|
T Consensus 162 ~v~~qm~~al~~Ii~vlq~~~~~e~~~~~~~~g~~l~-------~al~~~~~~----------i~~~p~~~~e~~~r~~L 224 (832)
T 4igg_A 162 LIYKQLQQAVTGISNAAQATASDDASQHQGGGGGELA-------YALNNFDKQ----------IIVDPLSFSEERFRPSL 224 (832)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSCSTTTTCCSSCSCHHH-------HHHHHHHHH----------HHSCCCSSCCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcccccccchHHHHH-------HHHHHHHHH----------HhcCccccccchhhHHH
Confidence 256677788887776532211 0 001111 232 233333222 3579999985 899999
Q ss_pred HHHHHHHhhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy5464 397 EERLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLLSDFMETD 446 (481)
Q Consensus 397 e~~Le~ii~g~a~~ADsa~Tr~e~rE~Iv~~Cn~lRqaLqdLlsey~~~~ 446 (481)
++.|+.||+|+++||||+||+|++|++||.+|+.+||+|+||+++|++..
T Consensus 225 ~~~Le~iv~~a~~~aDs~~t~~~~Re~Iv~~C~~vrq~L~dLl~~~~~~~ 274 (832)
T 4igg_A 225 EERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNA 274 (832)
T ss_dssp HHHHHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999764
No 12
>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A
Probab=98.08 E-value=0.032 Score=63.98 Aligned_cols=263 Identities=13% Similarity=0.125 Sum_probs=147.1
Q ss_pred HHHhhcCChhHHHHHHHHHHHHHHhhHHHHHhhhhhhcC-CCcHHHHHHHHhhHhhh--hHhHhhcc----CchHHHHHH
Q psy5464 199 KRQMELKDPQLRDDLAAARAILKKHSTMLLTASKVYVRH-PELAAAKENRNFVLGTT--GFFTLAVT----SLKKRSVSL 271 (481)
Q Consensus 199 ~Rq~dLkd~~~r~~l~aar~~Lkk~~~mL~ta~k~~~rh-p~~~~a~~nR~~v~~~~--~i~~~~~~----~~~~~~~~~ 271 (481)
+-..-..++..++++...-..+...+..|....+.-..+ |+.......=.-.+.++ .|..++.. .+.-.....
T Consensus 417 ~~a~~~~~~~~~~~il~~~~~i~~~s~~l~~~~~~~~~~~~~~~~~~~~v~~al~~l~~~ld~ai~~~~~~~~~~~~~~~ 496 (1066)
T 1tr2_A 417 KIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGK 496 (1066)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCTTTTSHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSSHHHH
T ss_pred HhccccCCchhHHHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccch
Confidence 333346677777776554444888888888877643333 44333111111111111 12222210 000001112
Q ss_pred HHHHHHhhccCcccccccccccHHHHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy5464 272 LHQVYERMVMDPLAYNERVRPSLEERLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLLSEYMANMSIKDPSE 351 (481)
Q Consensus 272 l~~~~~~~~~dp~~~~~~~r~~Le~~Le~Iis~a~~~aDs~~Tr~~rRerIvaeCn~lRqaLqdLLseym~n~g~k~~se 351 (481)
+.+.+.-+ ..|.. ..+.-.......+++....||. .|. +..|.+|+..|+.+.....+|+..-....| .+.
T Consensus 497 ~~qa~~~l-~~p~~---~~~~~~~~a~~~l~~~~~~la~-~~~-~~~r~~~l~~~k~v~~~s~qLl~~a~~~~~---~~P 567 (1066)
T 1tr2_A 497 IEQAQRWI-DNPTV---DDRGVGQAAIRGLVAEGHRLAN-VMM-GPYRQDLLAKCDRVDQLTAQLADLAARGEG---ESP 567 (1066)
T ss_dssp HHHHHHHH-HCTTS---CCCSHHHHHHHHHHHHHHHHHT-TSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCS---SCS
T ss_pred HHHHHHHh-cCccc---hhhhhhHHHHHHHHHHHHHHHH-hcC-chhHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCc
Confidence 22222222 23433 2222345788899999999994 355 446999999999999999999865444333 122
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHhhhhhhcCccccccccccchHHHHHHHhhhhhh----------hhcccccchhHH
Q psy5464 352 GLERAIDHMCRKTRDLRRQLRKAVVDHERMVMDPLAYNERVRPSLEERLESIISGAAL----------MADSNCTRDDRR 421 (481)
Q Consensus 352 ~Le~AI~~m~kktrDLRRqLrkAavDhV~~~~dpl~~~~~~r~~Le~~Le~ii~g~a~----------~ADsa~Tr~e~r 421 (481)
.-..+...|.+++++|+++|++++++||- | .|.. ...-|..|++.+.. |...+....++-
T Consensus 568 ~a~~~~~~L~~a~~~L~~~i~~~a~~~i~---d--~f~d-----~~~~l~~L~eaa~~~~~~~~~~~~~~~~a~~~~~~~ 637 (1066)
T 1tr2_A 568 QARALASQLQDSLKDLKARMQEAMTQEVS---D--VFSD-----TTTPIKLLAVAATAPPDAPNREEVFDERAANFENHS 637 (1066)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHH---H--HTTC-----CSHHHHHHHHHHHSCTTCTTTTTHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh---h--hHhh-----hhhHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHH
Confidence 33458899999999999999999999991 1 1221 11225555555542 333444444555
Q ss_pred HHHHHHHHHHHHHHH------H-HH--HHHhhcchhH--HHHHHHHhcCCHHHHHHHHHHHHHHHhHhhh
Q psy5464 422 ERIVAECNAVRQALQ------D-LL--SDFMETDIPI--LVLIEAARSGNEKEVEKAAENFADHANKLVE 480 (481)
Q Consensus 422 E~Iv~~Cn~lRqaLq------d-Ll--sey~~~~~~l--~~l~~aA~~g~~~~~~e~~~~f~e~~~~Lve 480 (481)
++++..|+.+...-. + +. ....+.+.|- .+-+.+..+++...++++...|.++|.+-+.
T Consensus 638 ~~L~~~a~~~~~~~~~~~~~~~~i~~aa~~l~~~t~~lv~aar~~~~~p~n~~Ak~~l~~~~~~~~~~v~ 707 (1066)
T 1tr2_A 638 GKLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVE 707 (1066)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 555555555555311 1 11 1111222221 3335556689999999999999999987653
No 13
>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A
Probab=97.60 E-value=0.00015 Score=70.56 Aligned_cols=109 Identities=23% Similarity=0.223 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHhhhhhhcCccccccccccchHHHHHHHhhhhhh-hhcccccchhHHHHHHHHHHHHHH-----HHHHHH
Q psy5464 366 DLRRQLRKAVVDHERMVMDPLAYNERVRPSLEERLESIISGAAL-MADSNCTRDDRRERIVAECNAVRQ-----ALQDLL 439 (481)
Q Consensus 366 DLRRqLrkAavDhV~~~~dpl~~~~~~r~~Le~~Le~ii~g~a~-~ADsa~Tr~e~rE~Iv~~Cn~lRq-----aLqdLl 439 (481)
||||+|+++++|||--.| ... ..-+...++....|-.. +.+.+..++++-+++++.|+.+++ .++..+
T Consensus 1 dL~~~l~~a~~~qv~d~f-----~~~-~~pl~~L~~AA~~g~~~~~~~~~~~f~~~~~~l~~~aklva~~s~~~~~~~~v 74 (256)
T 1h6g_A 1 DLRRQLRKAVMDHVSDSF-----LET-NVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLV 74 (256)
T ss_dssp CHHHHHHHHHGGGTTCTT-----TCC-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH-----Hhc-cHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 699999999999992221 111 11222333333333322 456678899999999999999986 233333
Q ss_pred HHH---hhcch--hHHHHHHHHhcCCHHHHHHHHHHHHHHHhHhhh
Q psy5464 440 SDF---METDI--PILVLIEAARSGNEKEVEKAAENFADHANKLVE 480 (481)
Q Consensus 440 sey---~~~~~--~l~~l~~aA~~g~~~~~~e~~~~f~e~~~~Lve 480 (481)
..- -+.-. .+.+.+..+.+|+++.+.|+.+.|.++|++-|+
T Consensus 75 ~~aa~~~~~l~pQvv~aar~l~~~p~s~~a~E~l~~~~~~w~~~v~ 120 (256)
T 1h6g_A 75 RMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVR 120 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 211 12222 345558888899999999999999999999765
No 14
>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A
Probab=96.33 E-value=0.28 Score=47.56 Aligned_cols=151 Identities=14% Similarity=0.077 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHh-hHHHHHH--
Q psy5464 59 LVAAVEKATENFIERGDAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLLILAD-MVDVHLLLKSL-RVVEDDL-- 134 (481)
Q Consensus 59 ~~~aV~~A~enfv~~G~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlLilaD-~vdV~~il~~~-~~v~~~l-- 134 (481)
++..|..|...+-.-|..+..|++-+...|.|...+++|--..+..-..|..|.-++| +.++..+|... .....+.
T Consensus 70 ~~~~v~~aa~~~~~l~pQvv~aar~l~~~p~s~~a~E~l~~~~~~w~~~v~~L~~~vd~~~~~~~fl~ase~~i~~~~~~ 149 (256)
T 1h6g_A 70 GVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNK 149 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 4556666777777777778888888889999999899987777777777777766665 33343333211 1111111
Q ss_pred -HHHHhcCChHHHHHHHHHhhhhHHHHHHHHhhccCCCCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcCChhHHHHH
Q psy5464 135 -EKVKNASSQGELLDNIKAFGRNATELMAQAAKHGAEGSSATQGELLDNIKAFGRNATELMAQAAKRQMELKDPQLRDDL 213 (481)
Q Consensus 135 -~~~~~~~s~~el~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLkd~~~r~~l 213 (481)
+..-...++++++...+.++ .....+...+..--..-.||..|+.+
T Consensus 150 c~~al~~~d~~~~~~~a~~i~---------------------------------~~a~rv~~v~k~e~d~~ed~~~~~~v 196 (256)
T 1h6g_A 150 CVIALQEKDVDGLDRTAGAIR---------------------------------GRAARVIHVVTSEMDNYEPGVYTEKV 196 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHTTTSCSSHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHHhcCCChHHHHHH
Confidence 11124455566666555555 55555554444444456799999999
Q ss_pred HHHHHHHHHh-hHHHHHhhhhh----hcCCCcHH
Q psy5464 214 AAARAILKKH-STMLLTASKVY----VRHPELAA 242 (481)
Q Consensus 214 ~aar~~Lkk~-~~mL~ta~k~~----~rhp~~~~ 242 (481)
..|-..|... +|.+..+.|.| -.+|+.+.
T Consensus 197 ~~a~~~L~~a~~p~mv~~ak~~~~~~a~np~d~~ 230 (256)
T 1h6g_A 197 LEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPM 230 (256)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHhhcCCCCHH
Confidence 9999999997 89899999998 77888643
No 15
>3dyj_A Talin-1; helix bundles, cytoskeletal protein, integrin-bindin site, IBS2, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane; 1.85A {Mus musculus} PDB: 4dj9_B
Probab=95.22 E-value=3.1 Score=42.35 Aligned_cols=90 Identities=14% Similarity=0.162 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHH-HHHHHhHHHHHHHHHHHHhhhhhhcCccccccccccch
Q psy5464 318 RRERIVAECNAVRQALQDLLSEYMANMSIKDPSEGLERAID-HMCRKTRDLRRQLRKAVVDHERMVMDPLAYNERVRPSL 396 (481)
Q Consensus 318 rRerIvaeCn~lRqaLqdLLseym~n~g~k~~se~Le~AI~-~m~kktrDLRRqLrkAavDhV~~~~dpl~~~~~~r~~L 396 (481)
.-+.|+..+|..|++..+||+..-......+.+++.-..+. ....+....+.-|. ++..+.
T Consensus 236 ~qeDii~aan~~r~aV~dll~~~k~aa~~~~~~~e~r~~~~~~~k~~a~~~~~LL~-~v~~~~----------------- 297 (332)
T 3dyj_A 236 RQEDVIATANLSRRAIADMLRACKEAAFHPEVAPDVRLRALHYGRECANGYLELLD-HVLLTL----------------- 297 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-----------------
T ss_pred CHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHh-----------------
Confidence 35789999999999999999987654433332334332222 22222223322222 222222
Q ss_pred HHHHHHHhhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5464 397 EERLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLLSDF 442 (481)
Q Consensus 397 e~~Le~ii~g~a~~ADsa~Tr~e~rE~Iv~~Cn~lRqaLqdLlsey 442 (481)
.++ .++.|.++-+..+.|-.++.+|++-.
T Consensus 298 --------------~~P---~~~~k~~L~~~Sr~VA~aVteLV~aa 326 (332)
T 3dyj_A 298 --------------QKP---NPDLKQQLTGHSKRVAGSVTELIQAA 326 (332)
T ss_dssp --------------HSC---CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------cCC---CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555 34799999999999999999998654
No 16
>2x0c_A Talin-1; cytoskeleton, cell membrane, actin, synemin, integrin, vincu cell adhesion, cell projection; 2.00A {Mus musculus} PDB: 1zw3_B
Probab=91.33 E-value=13 Score=37.26 Aligned_cols=156 Identities=15% Similarity=0.174 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHHHHHhh-----------------HHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHHHHHhHHHH
Q psy5464 58 VLVAAVEKATENFIERG-----------------DAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLLILADMVDV 120 (481)
Q Consensus 58 ~~~~aV~~A~enfv~~G-----------------~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlLilaD~vdV 120 (481)
+..++|+.|...+...- ..+..+|+.....|.....|..++.+|+.+-.+++.|+=
T Consensus 119 ra~~~i~~ac~~~~~~~~~q~~vL~~A~~va~~t~~L~~~cr~as~~~~n~~~k~ql~~~ak~va~st~~lV~------- 191 (309)
T 2x0c_A 119 RANQAIQMACQSLGEPGCTQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTANLVK------- 191 (309)
T ss_dssp HHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHhccCCccccHHHHHHHHHHHHHhhHHHHHHHHHHhcCcCCchHHHHHHHHHHHHHHHHHHHHH-------
Confidence 34566777666655542 345677888888888888999999999999999887762
Q ss_pred HHHHHHhhHHHHHHHHHHhc---CChHHHHHHHHHhhhhHHHHHHHHhhccCCCCcc--------chhhhhhhhhhhhhh
Q psy5464 121 HLLLKSLRVVEDDLEKVKNA---SSQGELLDNIKAFGRNATELMAQAAKHGAEGSSA--------TQGELLDNIKAFGRN 189 (481)
Q Consensus 121 ~~il~~~~~v~~~l~~~~~~---~s~~el~~~~~~f~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 189 (481)
++..+... .+..++..+.+.|-.-+-+|..-|-+-...++++ .|..++++.+.....
T Consensus 192 ------------~iK~ld~~~~~~~r~~~~~aa~~L~~Av~~Lv~~A~spefa~~~~~is~~~~~aq~~il~a~r~v~~~ 259 (309)
T 2x0c_A 192 ------------TIKALDGDFTEENRAQCRAATAPLLEAVDNLSAFASNPEFSSVPAQISPEGRAAMEPIVISAKTMLES 259 (309)
T ss_dssp ------------HHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSCBCCBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHhcChhhhhcccccChhhHHHHHHHHHHHHHHHHH
Confidence 11222222 1223344444444433333444433322222222 244566666666666
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHhhHHHHHhhh
Q psy5464 190 ATELMAQAAKRQMELKDPQLRDDLAAARAILKKHSTMLLTASK 232 (481)
Q Consensus 190 ~~~l~~~~~~Rq~dLkd~~~r~~l~aar~~Lkk~~~mL~ta~k 232 (481)
...|...++.-..+=+||..+.+|+.+-..+-.++..|+++++
T Consensus 260 s~~ll~taK~la~~P~dp~~~~~La~~ar~VSdsI~~Li~ai~ 302 (309)
T 2x0c_A 260 AGGLIQTARALAVNPRDPPRWSVLAGHSRTVSDSIKKLITSMR 302 (309)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666666666666666666666666666666666544
No 17
>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}
Probab=88.88 E-value=5.9 Score=35.33 Aligned_cols=75 Identities=16% Similarity=0.269 Sum_probs=58.3
Q ss_pred HhcCChHHHHHHHHHhhhhHHHHHHHHhhccCCCCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcCChhHHHHHHHHH
Q psy5464 138 KNASSQGELLDNIKAFGRNATELMAQAAKHGAEGSSATQGELLDNIKAFGRNATELMAQAAKRQMELKDPQLRDDLAAAR 217 (481)
Q Consensus 138 ~~~~s~~el~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLkd~~~r~~l~aar 217 (481)
-+..++++++...+.++ +....|...+......-.||..++.|..|-
T Consensus 34 ~s~~~p~~Mv~~ak~iA---------------------------------r~a~~Li~~~K~eAd~seDp~~~~rLl~AA 80 (131)
T 2l7a_A 34 SSMGDAGEMVRQARILA---------------------------------QATSDLVNAIKADAEGESDLENSRKLLSAA 80 (131)
T ss_dssp HHTTCHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 35667788888888887 444444444444455668999999999999
Q ss_pred HHHHHhhHHHHHhhhhhhcCCCcHHHHH
Q psy5464 218 AILKKHSTMLLTASKVYVRHPELAAAKE 245 (481)
Q Consensus 218 ~~Lkk~~~mL~ta~k~~~rhp~~~~a~~ 245 (481)
..|-..++=|+-+.|-|-.+|+.+.+..
T Consensus 81 k~La~At~~MVeaAK~~A~NP~d~~~q~ 108 (131)
T 2l7a_A 81 KILADATAKMVEAAKGAAAHPDSEEQQQ 108 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 9999999999999999999999976443
No 18
>1u89_A Talin 1, talin; 4-helix bundle, LEFT-handed, structural protein; NMR {Mus musculus} SCOP: a.216.1.1
Probab=86.87 E-value=8.5 Score=34.74 Aligned_cols=71 Identities=17% Similarity=0.270 Sum_probs=55.3
Q ss_pred HhcCChHHHHHHHHHhhhhHHHHHHHHhhccCCCCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcCChhHHHHHHHHH
Q psy5464 138 KNASSQGELLDNIKAFGRNATELMAQAAKHGAEGSSATQGELLDNIKAFGRNATELMAQAAKRQMELKDPQLRDDLAAAR 217 (481)
Q Consensus 138 ~~~~s~~el~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLkd~~~r~~l~aar 217 (481)
-+..+.+|.+...|.++ .....|....+.......||..|+.|..|=
T Consensus 64 ~s~gd~~eMvrqak~La---------------------------------qat~~LV~~iK~eAe~~~D~~~q~rLL~AA 110 (139)
T 1u89_A 64 SSMGDAGEMVRQARILA---------------------------------QATSDLVNAIKADAEGESDLENSRKLLSAA 110 (139)
T ss_dssp HTTTTSHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHGGGCSCHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 35667788888888888 333344444444445668999999999999
Q ss_pred HHHHHhhHHHHHhhhhhhcCCCcH
Q psy5464 218 AILKKHSTMLLTASKVYVRHPELA 241 (481)
Q Consensus 218 ~~Lkk~~~mL~ta~k~~~rhp~~~ 241 (481)
..|-..+.=|+=+.|-|..||+.+
T Consensus 111 k~lAdATa~mVeAAk~~a~nP~~~ 134 (139)
T 1u89_A 111 KILADATAKMVEAAKGAAAHPDSE 134 (139)
T ss_dssp HHHHHHHHHHHHHHHHTSSSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCch
Confidence 999999999999999999999975
No 19
>3dyj_A Talin-1; helix bundles, cytoskeletal protein, integrin-bindin site, IBS2, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane; 1.85A {Mus musculus} PDB: 4dj9_B
Probab=83.23 E-value=43 Score=34.12 Aligned_cols=162 Identities=14% Similarity=0.161 Sum_probs=92.4
Q ss_pred HHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHhhHHHHHHHH----HH------hcCCh
Q psy5464 76 AMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLLILA--DMVDVHLLLKSLRVVEDDLEK----VK------NASSQ 143 (481)
Q Consensus 76 ~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlLila--D~vdV~~il~~~~~v~~~l~~----~~------~~~s~ 143 (481)
.|..|++.....|...+.-..+-.+|+.+...|++||=.- =.-+--+-++.++.+.+.+.. +. +..++
T Consensus 132 ~Li~atK~A~G~~~~dpa~~~Lk~aAk~mv~nV~sLlktVk~vede~~rG~RaLEaai~~I~~el~~~~s~~~p~~~~tp 211 (332)
T 3dyj_A 132 DLISATKAAAGKVGDDPAVWQLKNSAKVMVTNVTSLLKTVKAVEDEATKGTRALEATTEHIRQELAVFCSPEPPAKTSTP 211 (332)
T ss_dssp HHHHHHHHTTTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSCCCH
T ss_pred HHHHHHHhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHccCCCCCCcCCCCH
Confidence 4556667777888888889999999999999999998753 111234445555554444322 21 12456
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhccCCCCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcC-ChhHHHHH-HHHHHHHH
Q psy5464 144 GELLDNIKAFGRNATELMAQAAKHGAEGSSATQGELLDNIKAFGRNATELMAQAAKRQMELK-DPQLRDDL-AAARAILK 221 (481)
Q Consensus 144 ~el~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLk-d~~~r~~l-~aar~~Lk 221 (481)
++|.+.-|... +--+.++-- |.|.+|.++...-|.+...+..|...+..=....- ++..|.+. ...+..-
T Consensus 212 E~li~~ak~vt----~atakaVaA---~ns~~qeDii~aan~~r~aV~dll~~~k~aa~~~~~~~e~r~~~~~~~k~~a- 283 (332)
T 3dyj_A 212 EDFIRMTKGIT----MATAKAVAA---GNSCRQEDVIATANLSRRAIADMLRACKEAAFHPEVAPDVRLRALHYGRECA- 283 (332)
T ss_dssp HHHHHHHHHHH----HHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHH----HHHHHHHHh---cCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH-
Confidence 77777655544 333333333 23667778887777777777777766542221121 23334333 3333322
Q ss_pred HhhHHHHHhhhhhhcCCCcHHHHHH
Q psy5464 222 KHSTMLLTASKVYVRHPELAAAKEN 246 (481)
Q Consensus 222 k~~~mL~ta~k~~~rhp~~~~a~~n 246 (481)
....=||.+-+.-..+| .+.+|..
T Consensus 284 ~~~~~LL~~v~~~~~~P-~~~~k~~ 307 (332)
T 3dyj_A 284 NGYLELLDHVLLTLQKP-NPDLKQQ 307 (332)
T ss_dssp HHHHHHHHHHHHHHHSC-CHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC-CHHHHHH
Confidence 23333455667666777 4444433
No 20
>3fyq_A CG6831-PA (talin); 5-helix bundle, cell adhesion; 1.95A {Drosophila melanogaster}
Probab=70.62 E-value=69 Score=30.48 Aligned_cols=118 Identities=16% Similarity=0.229 Sum_probs=74.0
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhhhhcCccccccc
Q psy5464 312 NCTRDDRRERIVAECNAVRQALQDLLSEYMANMSIKDPSEGLERAIDHMCRKTRDLRRQLRKAVVDHERMVMDPLAYNER 391 (481)
Q Consensus 312 ~~Tr~~rRerIvaeCn~lRqaLqdLLseym~n~g~k~~se~Le~AI~~m~kktrDLRRqLrkAavDhV~~~~dpl~~~~~ 391 (481)
.++.-++||.|+...+.+....+.|++ +.+..-|.|..+..+....+..|-.-.
T Consensus 39 ~~~F~~~qe~Ilk~Ak~Lvedtk~LV~------~a~~tQe~LA~aa~~~v~~i~~La~~v-------------------- 92 (199)
T 3fyq_A 39 DGSFADHREHILQTAKALVEDTKVLVT------GAAGTQDQLANAAQNAVSTITQLAEAV-------------------- 92 (199)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHH------HTSSCHHHHHHHHHHHHHHHHHHHHHH--------------------
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHH------cccCCHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 356678999999999999999999987 334456788888877776666663333
Q ss_pred cccchHHHHHHHhhhhhhh--hcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHhcCCHHHHHHHHH
Q psy5464 392 VRPSLEERLESIISGAALM--ADSNCTRDDRRERIVAECNAVRQALQDLLSDFMETDIPILVLIEAARSGNEKEVEKAAE 469 (481)
Q Consensus 392 ~r~~Le~~Le~ii~g~a~~--ADsa~Tr~e~rE~Iv~~Cn~lRqaLqdLlsey~~~~~~l~~l~~aA~~g~~~~~~e~~~ 469 (481)
..|++.+ .| .+--..++--|+.|--+||+|+.--.... ..-...|+-..+++.+.
T Consensus 93 ------------K~gAAsl~s~d-----p~tQv~LLna~kdVa~aL~~Li~atK~a~------g~~~~d~~~~~Lk~sak 149 (199)
T 3fyq_A 93 ------------KRGACSLGSTQ-----PDSQVMVINAVKDVASALGDLINCTKLAS------GKSINDPSMQDLKESAR 149 (199)
T ss_dssp ------------HHHHHHHCTTC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CHHHHHHHHH
T ss_pred ------------HHHHHHhcCCC-----cHHHHHHHHHHHHHHHHHHHHHHHhhhcc------CCCCCchHHHHHHHHHH
Confidence 3344333 33 33556788889999999999995444222 00011234555666666
Q ss_pred HHHHHHhHh
Q psy5464 470 NFADHANKL 478 (481)
Q Consensus 470 ~f~e~~~~L 478 (481)
+..+-..+|
T Consensus 150 ~~~~nV~sL 158 (199)
T 3fyq_A 150 VMVLNVSSL 158 (199)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 665555544
No 21
>1sj8_A Talin 1; structural protein; 2.60A {Mus musculus} SCOP: a.215.1.1 a.216.1.1
Probab=62.39 E-value=1.4e+02 Score=30.22 Aligned_cols=52 Identities=27% Similarity=0.331 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHHH
Q psy5464 59 LVAAVEKATENFIERGDAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLLI 113 (481)
Q Consensus 59 ~~~aV~~A~enfv~~G~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlLi 113 (481)
++.||---..|+-+..+-+..-+....+||.... .++.||+.|..++++||-
T Consensus 92 vg~aittI~snl~e~~~~vk~laaL~~d~~~~~~---~Ll~AAk~l~~Ais~Llk 143 (308)
T 1sj8_A 92 VGCAVTTISSNLTEMSRGVKLLAALLEDEGGNGR---PLLQAAKGLAGAVSELLR 143 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCH---HHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHhhhHHHHHHHHHHHhhcCCCccchH---HHHHHHHHHHHHHHHHHH
Confidence 4444444445554444444444444446655443 599999999999999865
No 22
>2l10_A Talin-1; helical bundle, cytoskeleton, focal adhesion, structu protein; NMR {Mus musculus}
Probab=59.19 E-value=1.1e+02 Score=27.99 Aligned_cols=91 Identities=19% Similarity=0.340 Sum_probs=70.6
Q ss_pred CChHHHHHHHHHhhhhHHHHHHHHhhc-cCCCCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcCChhHHHHHHHHHHH
Q psy5464 141 SSQGELLDNIKAFGRNATELMAQAAKH-GAEGSSATQGELLDNIKAFGRNATELMAQAAKRQMELKDPQLRDDLAAARAI 219 (481)
Q Consensus 141 ~s~~el~~~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLkd~~~r~~l~aar~~ 219 (481)
+++.+|...-+.|++.-.+|+.-.+.- |.--...+|.++++|++.+-..-..|...++..-.|-.+|..+.+|.+|-..
T Consensus 63 gsp~~La~as~~f~~~~~~l~~ag~~mag~~~~~~~r~~iv~~L~~vs~~s~~LL~~ak~~~~dp~~pn~~~~L~sAaR~ 142 (158)
T 2l10_A 63 GTPQDLARASGRFGQDFSTFLEAGVEMAGQAPSQEDRAQVVSNLKGISMSSSKLLLAAKALSTDPASPNLKSQLAAAARA 142 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHH
Confidence 467777777777776666665544431 2222234688999999999999999999999999999999999999998888
Q ss_pred HHHhhHHHHHhh
Q psy5464 220 LKKHSTMLLTAS 231 (481)
Q Consensus 220 Lkk~~~mL~ta~ 231 (481)
+..++-=|++.+
T Consensus 143 VtesIN~Lv~~c 154 (158)
T 2l10_A 143 VTDSINQLITMC 154 (158)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777764
No 23
>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*
Probab=56.79 E-value=37 Score=29.84 Aligned_cols=53 Identities=26% Similarity=0.295 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHhhh
Q psy5464 317 DRRERIVAECNAVRQALQDLLSEYMANMSIKDPSEGLERAIDHMCRKTRDLRRQLRKAVVDHE 379 (481)
Q Consensus 317 ~rRerIvaeCn~lRqaLqdLLseym~n~g~k~~se~Le~AI~~m~kktrDLRRqLrkAavDhV 379 (481)
.+|+.|-+...+.+.+|.+.|. ..+..+.....||+.+...+.+| +++.+.|+
T Consensus 38 ~~r~~le~emRaan~~La~ai~------~~~~~~p~V~aaid~~h~~mG~L----QkeTi~Hv 90 (118)
T 2y39_A 38 QRRREIETRLRAANGKLADAIA------KNPAWSPEVEAATQEVERAAGDL----QRATLVHV 90 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH------HCCSCCHHHHHHHHHHHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------hccccCHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 3578888999999999998875 22336788999999999988886 66788888
No 24
>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 4e17_A 4e18_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A ...
Probab=55.74 E-value=1.5e+02 Score=28.70 Aligned_cols=150 Identities=18% Similarity=0.272 Sum_probs=83.4
Q ss_pred hhhhhhhhHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHhhHHHHHhhhhhhcCCCcHHHHH-----HHHhhHhhhh-
Q psy5464 182 NIKAFGRNATELMAQAAKRQMELKDPQLRDDLAAARAILKKHSTMLLTASKVYVRHPELAAAKE-----NRNFVLGTTG- 255 (481)
Q Consensus 182 ~~~~~~~~~~~l~~~~~~Rq~dLkd~~~r~~l~aar~~Lkk~~~mL~ta~k~~~rhp~~~~a~~-----nR~~v~~~~~- 255 (481)
=..++.....+|.....+=..+=.||..+++|-.|-.-+++....|+.++..+...|....++. .|...-+.+.
T Consensus 43 ~~~aV~~Av~nfv~vG~~ia~~~ed~~lk~eM~~A~~~v~~ag~~l~~aa~~~~~dP~s~~~R~~lV~aAR~lLs~vtrl 122 (258)
T 3rf3_A 43 PVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDL 122 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHH
Confidence 3444445555555444333335679999999999999999999999999999999998877653 3333333221
Q ss_pred --HhHhhccCchHHHHHHHHHHHHhhcc----Ccc-cccc---cccccHHHHHHHHHHHHHhhhhcCCCChhhHHHHHHH
Q psy5464 256 --FFTLAVTSLKKRSVSLLHQVYERMVM----DPL-AYNE---RVRPSLEERLESIISGAALMADSNCTRDDRRERIVAE 325 (481)
Q Consensus 256 --i~~~~~~~~~~~~~~~l~~~~~~~~~----dp~-~~~~---~~r~~Le~~Le~Iis~a~~~aDs~~Tr~~rRerIvae 325 (481)
+++.+ --..+...++.+.+.+.. ++. .+.. .+.+.+.+.....=.+..+ -+.+.||+++.+-
T Consensus 123 LllaD~~---dVr~il~~~~~v~~~l~~l~~~~~~~el~~~~~~f~~~~~~L~~~~~~Rq~e-----L~~~~~r~~l~~A 194 (258)
T 3rf3_A 123 LLTFDEA---EVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQE-----LTHQEHRVMLVNS 194 (258)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHTTGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----BSCHHHHHHHHHH
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CCCHHHHHHHHHH
Confidence 11110 011133333333333310 000 0000 1112222222222233333 4556999999888
Q ss_pred HHHHHHHHHHHHHH
Q psy5464 326 CNAVRQALQDLLSE 339 (481)
Q Consensus 326 Cn~lRqaLqdLLse 339 (481)
...++...--|++-
T Consensus 195 r~~Lk~~~p~L~ta 208 (258)
T 3rf3_A 195 MNTVKELLPVLISA 208 (258)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888777777664
No 25
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=52.55 E-value=1.1e+02 Score=26.22 Aligned_cols=24 Identities=8% Similarity=0.030 Sum_probs=21.1
Q ss_pred hcCCHHHHHHHHHHHHHHHhHhhh
Q psy5464 457 RSGNEKEVEKAAENFADHANKLVE 480 (481)
Q Consensus 457 ~~g~~~~~~e~~~~f~e~~~~Lve 480 (481)
.+.....+.+..+.+..+|+.|.+
T Consensus 115 ~~~~~~~I~~rl~~l~~~W~~L~~ 138 (149)
T 3f31_A 115 GHFASETIRTRLMELHRQWELLLE 138 (149)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHH
Confidence 367789999999999999999875
No 26
>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}
Probab=44.58 E-value=51 Score=29.33 Aligned_cols=37 Identities=27% Similarity=0.194 Sum_probs=32.9
Q ss_pred HHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHH
Q psy5464 75 DAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRL 111 (481)
Q Consensus 75 ~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrl 111 (481)
.-|+.+|+.++.+|.++.....+.+++..|+.+|...
T Consensus 88 ~~MVeaAK~~A~NP~d~~~q~~Lr~Aae~L~~at~~~ 124 (131)
T 2l7a_A 88 AKMVEAAKGAAAHPDSEEQQQRLREAAEGLRMATNAA 124 (131)
T ss_dssp HHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999999999999999999999888753
No 27
>1u89_A Talin 1, talin; 4-helix bundle, LEFT-handed, structural protein; NMR {Mus musculus} SCOP: a.216.1.1
Probab=42.67 E-value=1.9e+02 Score=25.98 Aligned_cols=30 Identities=7% Similarity=0.265 Sum_probs=23.4
Q ss_pred hcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q psy5464 411 ADSNCTRDDRRERIVAECNAVRQALQDLLSD 441 (481)
Q Consensus 411 ADsa~Tr~e~rE~Iv~~Cn~lRqaLqdLlse 441 (481)
||.. +-.+.+++.+.-++.|-+|...++..
T Consensus 94 Ae~~-~D~~~q~rLL~AAk~lAdATa~mVeA 123 (139)
T 1u89_A 94 AEGE-SDLENSRKLLSAAKILADATAKMVEA 123 (139)
T ss_dssp GGGC-SCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcc-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 45678899999999999999988843
No 28
>2l10_A Talin-1; helical bundle, cytoskeleton, focal adhesion, structu protein; NMR {Mus musculus}
Probab=40.57 E-value=1e+02 Score=28.17 Aligned_cols=36 Identities=28% Similarity=0.509 Sum_probs=24.3
Q ss_pred HHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHH
Q psy5464 77 MSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLL 112 (481)
Q Consensus 77 m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlL 112 (481)
|..+++...-||..+..+..+.-|||.+=.++-+|+
T Consensus 116 LL~~ak~~~~dp~~pn~~~~L~sAaR~VtesIN~Lv 151 (158)
T 2l10_A 116 LLLAAKALSTDPASPNLKSQLAAAARAVTDSINQLI 151 (158)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 444566666777777777777777777666665554
No 29
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=38.35 E-value=97 Score=27.15 Aligned_cols=24 Identities=17% Similarity=0.191 Sum_probs=20.4
Q ss_pred hcCCHHHHHHHHHHHHHHHhHhhh
Q psy5464 457 RSGNEKEVEKAAENFADHANKLVE 480 (481)
Q Consensus 457 ~~g~~~~~~e~~~~f~e~~~~Lve 480 (481)
.+.....+.+....+.+.|+.|.+
T Consensus 125 ~~~~~~~I~~rl~eL~~~W~~L~~ 148 (161)
T 3lbx_A 125 GHSAHEETKAHIEELRHLWDLLLE 148 (161)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHH
Confidence 355688899999999999999864
No 30
>4f7g_B Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} PDB: 2kbb_A 2kgx_A
Probab=35.96 E-value=2.7e+02 Score=26.65 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=19.7
Q ss_pred hcCChh-HHHHHHHHHHHHHHhhHHHHHhhhhhhcCCC
Q psy5464 203 ELKDPQ-LRDDLAAARAILKKHSTMLLTASKVYVRHPE 239 (481)
Q Consensus 203 dLkd~~-~r~~l~aar~~Lkk~~~mL~ta~k~~~rhp~ 239 (481)
-++|.+ +.+-|..++.+.+-...|+ .++|..=.+|.
T Consensus 120 ~t~ds~~Q~~lLdq~Ktv~es~lqlv-~AaK~agGNPk 156 (216)
T 4f7g_B 120 KTLSHPQQMALLDQTKTLAESALQLL-YTAKEAGGNPK 156 (216)
T ss_dssp HCSSHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCSCTT
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 355554 3334555555555555555 45566556666
No 31
>3qb5_K Translin-associated protein X; alpha helical bundle, ribonuclease, hydrolase; 2.95A {Homo sapiens} PDB: 3pja_J
Probab=34.21 E-value=2.5e+02 Score=27.55 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=56.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhhhhcCcccccccccc
Q psy5464 315 RDDRRERIVAECNAVRQALQDLLSEYMANMSIKDPSEGLERAIDHMCRKTRDLRRQLRKAVVDHERMVMDPLAYNERVRP 394 (481)
Q Consensus 315 r~~rRerIvaeCn~lRqaLqdLLseym~n~g~k~~se~Le~AI~~m~kktrDLRRqLrkAavDhV~~~~dpl~~~~~~r~ 394 (481)
.|+.||+|+..|..|...=...|..--. . ...+..+..+.....++..++..+...+ .-+ ...++..|...|.+
T Consensus 49 ~~d~REriik~sRdIt~~SK~~If~LhR--~--~~~~~~~~il~ea~~~L~~i~~~~~~La-~~l-~~~~~yry~~~~s~ 122 (290)
T 3qb5_K 49 RHDKYERLVKLSRDITVESKRTIFLLHR--I--TSAPDMEDILTESEIKLDGVRQKIFQVA-QEL-SGEDMHQFHRAITT 122 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--C--CSSTTHHHHHHHHHHHHHHHHHHHHHHH-HHH-SSSCSTTTGGGTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh--c--ccccchHHHHHHHHHHHHHHHHHHHHHH-HHh-ccCCHHHHHHHHHH
Confidence 3688999999988876543333321111 1 1122344455566666666655554322 222 12345566778999
Q ss_pred chHHHHHHHhhhhhhhhcccccch
Q psy5464 395 SLEERLESIISGAALMADSNCTRD 418 (481)
Q Consensus 395 ~Le~~Le~ii~g~a~~ADsa~Tr~ 418 (481)
.+++-.|++.=-..+...+=.|+.
T Consensus 123 ~lQEyVEA~sf~~yL~~~~Lit~e 146 (290)
T 3qb5_K 123 GLQEYVEAVSFQHFIKTRSLISMD 146 (290)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCHH
Confidence 999999998666666555444443
No 32
>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}
Probab=32.98 E-value=2.9e+02 Score=25.29 Aligned_cols=138 Identities=21% Similarity=0.238 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHH
Q psy5464 58 VLVAAVEKATENFIERGDAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLLILADMVDVHLLLKSLRVVEDDLEKV 137 (481)
Q Consensus 58 ~~~~aV~~A~enfv~~G~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlLilaD~vdV~~il~~~~~v~~~l~~~ 137 (481)
.++..+.+|+.++-+ |..+ ++ +-...+.+..|++.++.|-..+. ||+ -
T Consensus 18 glvd~I~~ai~~l~~-~~~~-----~~--~~sf~dYQt~m~~~~K~iA~~aq------~mv------------------~ 65 (165)
T 2kvp_A 18 GMVDSITQAINQLDE-GPMG-----DP--EGSFVDYQTTMVRTAKAIAVTVQ------EMV------------------T 65 (165)
T ss_dssp SHHHHHHHHHHHHHH-CCCC-----CC--SSCHHHHHHHHHHHHHHHHHHHH------HHH------------------H
T ss_pred hHHHHHHHHHHHhhc-ccCC-----CC--CCCHHHHHHHHHHHHHHHHHHHH------HHh------------------c
Confidence 478999998887655 3110 11 11445789999999987654332 111 2
Q ss_pred HhcCChHHHHHHHHHhhhhHHHHHHHHhh-ccCCCCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcCChh-HHHHHHH
Q psy5464 138 KNASSQGELLDNIKAFGRNATELMAQAAK-HGAEGSSATQGELLDNIKAFGRNATELMAQAAKRQMELKDPQ-LRDDLAA 215 (481)
Q Consensus 138 ~~~~s~~el~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLkd~~-~r~~l~a 215 (481)
+...+++||...-++++..-.+|-.++.- ++.-++......|.++..-+|....+|...++..|.+=.|+. +|+-..+
T Consensus 66 k~~~~p~eL~~la~~it~~y~~La~~~~~A~~t~~~~~i~~~Ik~~Vq~LG~sc~~lV~~ag~~q~~p~d~~~q~eL~~~ 145 (165)
T 2kvp_A 66 KSNTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHGCSALVTKAGALQCSPSDVYTKKELIEC 145 (165)
T ss_dssp HHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhHHHHHHHHHHhhccCCCccHHHHHHHHHH
Confidence 34567777777666666444444444322 233445555667777888888888888888888888888887 5666667
Q ss_pred HHHHHHHhhHHH
Q psy5464 216 ARAILKKHSTML 227 (481)
Q Consensus 216 ar~~Lkk~~~mL 227 (481)
||.+-+|-+.+|
T Consensus 146 aR~VsekVs~vL 157 (165)
T 2kvp_A 146 ARRVSEKVSHVL 157 (165)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777666553
No 33
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=32.65 E-value=73 Score=25.12 Aligned_cols=58 Identities=14% Similarity=0.113 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCC--CCCchHHHHHHHHHHHhHHHHHHHHHHHH
Q psy5464 319 RERIVAECNAVRQALQDLLSEYMANMSIK--DPSEGLERAIDHMCRKTRDLRRQLRKAVV 376 (481)
Q Consensus 319 RerIvaeCn~lRqaLqdLLseym~n~g~k--~~se~Le~AI~~m~kktrDLRRqLrkAav 376 (481)
...|-...+.+...++.|.+.|.+..... ..-..+..++.++...+.+..++|+.++-
T Consensus 24 ~~~i~~~l~~L~~~~~~l~~~W~G~a~~aF~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~ 83 (98)
T 3gwk_C 24 SQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVAD 83 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHBCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788888899999999999897643210 01145666667777777777777766553
No 34
>2x0c_A Talin-1; cytoskeleton, cell membrane, actin, synemin, integrin, vincu cell adhesion, cell projection; 2.00A {Mus musculus} PDB: 1zw3_B
Probab=32.28 E-value=3.9e+02 Score=26.57 Aligned_cols=151 Identities=18% Similarity=0.244 Sum_probs=76.5
Q ss_pred CCccchhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCh-hHHHHHHHHHHHHHHhhHHHHHhhhhhhcCCCcHHHHHHHHh
Q psy5464 171 GSSATQGELLDNIKAFGRNATELMAQAAKRQMELKDP-QLRDDLAAARAILKKHSTMLLTASKVYVRHPELAAAKENRNF 249 (481)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~dLkd~-~~r~~l~aar~~Lkk~~~mL~ta~k~~~rhp~~~~a~~nR~~ 249 (481)
+|.+.+.-|+|-.+ |.+.-..+..-.. -+.+| ..+.+|..+-.++-+++..|+-++|.-...|.++.++. .|
T Consensus 103 ~s~~g~~glvD~~~-~~ra~~~i~~ac~----~~~~~~~~q~~vL~~A~~va~~t~~L~~~cr~as~~~~n~~~k~--ql 175 (309)
T 2x0c_A 103 NSQAGQQGLVEPTQ-FARANQAIQMACQ----SLGEPGCTQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKR--QF 175 (309)
T ss_dssp TCBCCBCCSSCSHH-HHHHHHHHHHHHH----HHHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHH--HH
T ss_pred ccccCccccchHHH-HHHHHHHHHHHHh----ccCCccccHHHHHHHHHHHHHhhHHHHHHHHHHhcCcCCchHHH--HH
Confidence 45555555554332 3333333333222 34455 44444444444555788889999998889999887665 33
Q ss_pred hHhhhhHhHhhccCchHHHHHHHHHHHHhhccCccccccccccc-------HHHHHHHHHHHHH--hhhhcC--CCC--h
Q psy5464 250 VLGTTGFFTLAVTSLKKRSVSLLHQVYERMVMDPLAYNERVRPS-------LEERLESIISGAA--LMADSN--CTR--D 316 (481)
Q Consensus 250 v~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~dp~~~~~~~r~~-------Le~~Le~Iis~a~--~~aDs~--~Tr--~ 316 (481)
+-.-..+... -..++..+++++.- |++..|.. |.+..+.++-.|- .|+.++ .+. .
T Consensus 176 ~~~ak~va~s-----t~~lV~~iK~ld~~-------~~~~~r~~~~~aa~~L~~Av~~Lv~~A~spefa~~~~~is~~~~ 243 (309)
T 2x0c_A 176 VQSAKEVANS-----TANLVKTIKALDGD-------FTEENRAQCRAATAPLLEAVDNLSAFASNPEFSSVPAQISPEGR 243 (309)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHHHTTS-------CCHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSCBCCBCCHHHH
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHhcc-------CCchhHHHHHHHHHHHHHHHHHHHHHhcChhhhhcccccChhhH
Confidence 3322222111 02234445444432 22211211 3333333332221 122222 222 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q psy5464 317 DRRERIVAECNAVRQALQDLLSEY 340 (481)
Q Consensus 317 ~rRerIvaeCn~lRqaLqdLLsey 340 (481)
..++.|+.-+..+...-..||.--
T Consensus 244 ~aq~~il~a~r~v~~~s~~ll~ta 267 (309)
T 2x0c_A 244 AAMEPIVISAKTMLESAGGLIQTA 267 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234789999999999888888754
No 35
>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}
Probab=30.60 E-value=1.3e+02 Score=27.57 Aligned_cols=46 Identities=20% Similarity=0.349 Sum_probs=37.6
Q ss_pred HHHHH-Hhh---HHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHH
Q psy5464 67 TENFI-ERG---DAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLL 112 (481)
Q Consensus 67 ~enfv-~~G---~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlL 112 (481)
+-..+ +.| -.|..++.-+..+|.....+..+.++||.+-..|++||
T Consensus 108 Ik~~Vq~LG~sc~~lV~~ag~~q~~p~d~~~q~eL~~~aR~VsekVs~vL 157 (165)
T 2kvp_A 108 IKHRVQELGHGCSALVTKAGALQCSPSDVYTKKELIECARRVSEKVSHVL 157 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444 555 35888888899999988889999999999999999886
No 36
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=29.84 E-value=3.1e+02 Score=24.72 Aligned_cols=24 Identities=4% Similarity=0.035 Sum_probs=21.0
Q ss_pred hcCCHHHHHHHHHHHHHHHhHhhh
Q psy5464 457 RSGNEKEVEKAAENFADHANKLVE 480 (481)
Q Consensus 457 ~~g~~~~~~e~~~~f~e~~~~Lve 480 (481)
.+++...+..+.+.+.++|++|.+
T Consensus 190 ~h~~~~~I~~~~~~l~~~W~~L~~ 213 (224)
T 2iak_A 190 NHPARLTIEAYRAAMQTQWSWILQ 213 (224)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHH
Confidence 377888899999999999999875
No 37
>1qkr_A Vinculin, tail domain; actin cytoskeleton, cell adhesion, helical bundle, lipid binding; 1.8A {Gallus gallus} SCOP: a.24.9.1 PDB: 3h2u_A 3h2v_A 1rke_B 3myi_A
Probab=29.20 E-value=3.6e+02 Score=25.24 Aligned_cols=78 Identities=17% Similarity=0.275 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHHH---HHHHhccCCCCCC-chHHHHHHHHHHHhHHHHHHHH
Q psy5464 297 RLESIISGAALMADSNCTRDDRRERIVAECNAVRQALQDLL---SEYMANMSIKDPS-EGLERAIDHMCRKTRDLRRQLR 372 (481)
Q Consensus 297 ~Le~Iis~a~~~aDs~~Tr~~rRerIvaeCn~lRqaLqdLL---seym~n~g~k~~s-e~Le~AI~~m~kktrDLRRqLr 372 (481)
.-..+..-+..||+. |+-+..|+.++..|+++-.--++|- ++.-...|....+ +.-+.|.+.+.+++++|..-+.
T Consensus 79 ~~~~l~k~ar~iA~q-c~D~~~k~~Ll~~~~rI~t~~~QLkIls~VKA~~~g~~~~~~~~~~~a~e~LIq~AkNLM~aV~ 157 (188)
T 1qkr_A 79 ASDEVTRLAKEVAKQ-CTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVK 157 (188)
T ss_dssp HHHHHHHHHHHHHHH-CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-CCChHHHHHHHHHHHhhhHHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHH
Confidence 334456667788885 9988889999999888766555542 2222222432222 3446789999999999987765
Q ss_pred HHH
Q psy5464 373 KAV 375 (481)
Q Consensus 373 kAa 375 (481)
..+
T Consensus 158 ~tV 160 (188)
T 1qkr_A 158 ETV 160 (188)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 38
>3axj_B TRAX, translin associated factor X, isoform B; translin/TRAX heterodimer, passenger RNA cleavage, RNAse, DN protein; 2.10A {Drosophila melanogaster} PDB: 3riu_C
Probab=28.73 E-value=1.9e+02 Score=28.56 Aligned_cols=92 Identities=16% Similarity=0.170 Sum_probs=53.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhhhhcCcccccccccc
Q psy5464 315 RDDRRERIVAECNAVRQALQDLLSEYMANMSIKDPSEGLERAIDHMCRKTRDLRRQLRKAVVDHERMVMDPLAYNERVRP 394 (481)
Q Consensus 315 r~~rRerIvaeCn~lRqaLqdLLseym~n~g~k~~se~Le~AI~~m~kktrDLRRqLrkAavDhV~~~~dpl~~~~~~r~ 394 (481)
.|+.||+|+..|..|-..-...+.. ++. .. ...+..+..+.....++..++.++=+.+...+ ...++-.|...|.+
T Consensus 44 ~~d~RErIikisRdIt~~Sk~~If~-Lhr-~~-~~~~~~~~~l~eA~~~l~~i~~~~~~~la~~l-~~~~~y~y~~~~s~ 119 (298)
T 3axj_B 44 KHDRHERIVKLSRDITIESKRIIFL-LHS-ID-SRKQNKEKVLEEARQRLNKLIAVNFRAVALEL-RDQDVYQFRSSYSP 119 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HTT-CC-SCGGGHHHHHHHHHHHHHHHHHTHHHHHHHHT-TTSCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHh-cc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHc-CccCHHHHHhccCH
Confidence 3788999999988886655554432 221 11 11144555555666666666654422233323 11245566678889
Q ss_pred chHHHHHHHhhhhhhh
Q psy5464 395 SLEERLESIISGAALM 410 (481)
Q Consensus 395 ~Le~~Le~ii~g~a~~ 410 (481)
.+++-.|++.=-..+.
T Consensus 120 ~lQE~VEA~~f~~yL~ 135 (298)
T 3axj_B 120 GLQEFIQAYTYMEYLC 135 (298)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999998875444444
No 39
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=28.22 E-value=1.6e+02 Score=24.71 Aligned_cols=44 Identities=20% Similarity=0.298 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHhHHHHHHHHH
Q psy5464 329 VRQALQDLLSEYMANMSIKDPSEGLERAIDHMCRKTRDLRRQLRK 373 (481)
Q Consensus 329 lRqaLqdLLseym~n~g~k~~se~Le~AI~~m~kktrDLRRqLrk 373 (481)
-|..|..++..|..|+.-. ....++--+..+.+++.-|+-.|++
T Consensus 37 ~regl~Km~~vY~~nP~~G-D~~s~~~~L~e~~~kid~L~~el~K 80 (98)
T 2ke4_A 37 QREALKKMKDVYEKTPQMG-DPASLEPQIAETLSNIERLKLEVQK 80 (98)
T ss_dssp HHTHHHHHHHHHHHCGGGC-CGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777888898876221 3445677888889999999888876
No 40
>2b0h_A Talin-1; vinculin, helical bundle, VBS, structural protein; NMR {Mus musculus} SCOP: a.24.9.2
Probab=27.67 E-value=1.7e+02 Score=26.11 Aligned_cols=52 Identities=17% Similarity=0.316 Sum_probs=0.0
Q ss_pred HHHHHHHHHHH-Hhh---HHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHH
Q psy5464 61 AAVEKATENFI-ERG---DAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLL 112 (481)
Q Consensus 61 ~aV~~A~enfv-~~G---~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlL 112 (481)
.-|..=+-..| +.| -.|...+.-+..+|.....+..+.++||.+-.-|+.||
T Consensus 74 ~~v~~~Ir~~Vq~LG~ac~~lV~~ag~~q~~p~d~~~q~eL~~~aR~VsEkVs~vL 129 (137)
T 2b0h_A 74 EEIGAHIKHRVQELGHGCSALVTKAGALQCSPSDVYTKKELIECARRVSEKVSHVL 129 (137)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHHHHHHHHH
No 41
>3fyq_A CG6831-PA (talin); 5-helix bundle, cell adhesion; 1.95A {Drosophila melanogaster}
Probab=27.22 E-value=4.1e+02 Score=25.22 Aligned_cols=87 Identities=18% Similarity=0.245 Sum_probs=51.7
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHhcCChHHHHHHHHHhhhhHHHHHHHHhhccCC
Q psy5464 91 SLKRGNMVRAARNLLSAVTRLLILADMVDVHLLLKSLRVVEDDLEKVKNASSQGELLDNIKAFGRNATELMAQAAKHGAE 170 (481)
Q Consensus 91 ~~~R~~mvraaR~lLs~vtrlLilaD~vdV~~il~~~~~v~~~l~~~~~~~s~~el~~~~~~f~~~~~~~~~~~~~~~~~ 170 (481)
...|+.+++.|+.|.... +.|+. -..+|+++|-..-+.+....+ -++.++|.||-
T Consensus 43 ~~~qe~Ilk~Ak~Lvedt------------k~LV~------------~a~~tQe~LA~aa~~~v~~i~-~La~~vK~gAA 97 (199)
T 3fyq_A 43 ADHREHILQTAKALVEDT------------KVLVT------------GAAGTQDQLANAAQNAVSTIT-QLAEAVKRGAC 97 (199)
T ss_dssp HHHHHHHHHHHHHHHHHH------------HHHHH------------HTSSCHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH------------HHHHH------------cccCCHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 468899999998776543 33332 256777778777777773222 34556666632
Q ss_pred ----CCccchhhhhhhhhhhhhhHHHHHHHHHHHHh
Q psy5464 171 ----GSSATQGELLDNIKAFGRNATELMAQAAKRQM 202 (481)
Q Consensus 171 ----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Rq~ 202 (481)
+.+.+|-.||.-.|.+...+.+|...++.=+-
T Consensus 98 sl~s~dp~tQv~LLna~kdVa~aL~~Li~atK~a~g 133 (199)
T 3fyq_A 98 SLGSTQPDSQVMVINAVKDVASALGDLINCTKLASG 133 (199)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence 23445666666666666666666555554433
No 42
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=26.61 E-value=1.1e+02 Score=23.55 Aligned_cols=58 Identities=9% Similarity=0.215 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCC--CCCchHHHHHHHHHHHhHHHHHHHHHHHH
Q psy5464 319 RERIVAECNAVRQALQDLLSEYMANMSIK--DPSEGLERAIDHMCRKTRDLRRQLRKAVV 376 (481)
Q Consensus 319 RerIvaeCn~lRqaLqdLLseym~n~g~k--~~se~Le~AI~~m~kktrDLRRqLrkAav 376 (481)
...|-...+.+...++.|.+.|.+..... ..-..+..++.++...+.++.+.|+.++-
T Consensus 22 ~~~l~~~l~~L~~~~~~L~~~W~G~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~ 81 (97)
T 2vs0_A 22 SDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTAD 81 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888888899999988887643210 01145555666666666666666665543
No 43
>1sj7_A Talin 1; structural protein; 2.50A {Mus musculus} SCOP: a.215.1.1
Probab=25.48 E-value=1.9e+02 Score=26.99 Aligned_cols=52 Identities=27% Similarity=0.331 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhHhhcCCCCchhhhhHHHHHHHHHHHHHHHHH
Q psy5464 59 LVAAVEKATENFIERGDAMSLAAREFADDPCSSLKRGNMVRAARNLLSAVTRLLI 113 (481)
Q Consensus 59 ~~~aV~~A~enfv~~G~~m~~Aa~~f~~dp~s~~~R~~mvraaR~lLs~vtrlLi 113 (481)
++.||---..|+-+..+-+..-+.-.-+|+.... ++++|||.|..++++||-
T Consensus 92 VG~AittI~SNl~em~k~vk~laAL~~de~~~g~---~Ll~Aar~L~~A~s~lLk 143 (174)
T 1sj7_A 92 VGCAVTTISSNLTEMSRGVKLLAALLEDEGGNGR---PLLQAAKGLAGAVSELLR 143 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCH---HHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHhhhHHHHHHHHHHHhhccCCccccH---HHHHHHHHHHHHHHHHHh
Confidence 4455555555555544444443433345545554 499999999999999865
No 44
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=21.75 E-value=97 Score=24.06 Aligned_cols=57 Identities=12% Similarity=0.142 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCC--CCCchHHHHHHHHHHHhHHHHHHHHHHH
Q psy5464 319 RERIVAECNAVRQALQDLLSEYMANMSIK--DPSEGLERAIDHMCRKTRDLRRQLRKAV 375 (481)
Q Consensus 319 RerIvaeCn~lRqaLqdLLseym~n~g~k--~~se~Le~AI~~m~kktrDLRRqLrkAa 375 (481)
.+.|-...+.+...++.|...|.+..... ..-..+..++.++...+.++.+.|+.++
T Consensus 25 ~~~i~~~l~~L~~~v~~L~~~W~G~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a 83 (99)
T 3zbh_A 25 SSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSA 83 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888888888999988886643210 0114456666667777777777776655
No 45
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=20.82 E-value=1.3e+02 Score=23.28 Aligned_cols=57 Identities=9% Similarity=0.137 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCC--CCCchHHHHHHHHHHHhHHHHHHHHHHH
Q psy5464 319 RERIVAECNAVRQALQDLLSEYMANMSIK--DPSEGLERAIDHMCRKTRDLRRQLRKAV 375 (481)
Q Consensus 319 RerIvaeCn~lRqaLqdLLseym~n~g~k--~~se~Le~AI~~m~kktrDLRRqLrkAa 375 (481)
...|-...+.++..++.|.+.|.|..... ..-..+..++.++...+.++.++|++++
T Consensus 25 ~~~i~~~l~~L~~~~~~L~~~W~G~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~A 83 (93)
T 4ioe_A 25 AGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIA 83 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777888777776532110 0113344477777788888888887655
Done!