BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy547
(282 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|194131839|gb|ACF33225.1| Y-box protein Lyb2 [Lethenteron camtschaticum]
Length = 181
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 76/99 (76%)
Query: 24 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 83
K E V+ATKV G VKWF+VK+GYGFI + EDVF+H IK NNPRK +++ +GET
Sbjct: 53 KPEKKVIATKVLGTVKWFNVKNGYGFINRNDTKEDVFIHQTAIKKNNPRKYLRSVGDGET 112
Query: 84 VEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
VEFD+++G+KG EA NVTGPDG VQGS++AA++ +Y R
Sbjct: 113 VEFDVVEGEKGAEAANVTGPDGAAVQGSRYAADRGRYRR 151
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 56/75 (74%)
Query: 187 SESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLA 246
++ K E V+ATKV G VKWF+VK+GYGFI + EDVF+H IK NNPRK +++
Sbjct: 49 TQPQKPEKKVIATKVLGTVKWFNVKNGYGFINRNDTKEDVFIHQTAIKKNNPRKYLRSVG 108
Query: 247 EGETVEFDIMQGDKG 261
+GETVEFD+++G+KG
Sbjct: 109 DGETVEFDVVEGEKG 123
>gi|194131800|gb|ACF33224.1| Y-box protein Lyb3 [Lethenteron camtschaticum]
Length = 171
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 76/99 (76%)
Query: 24 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 83
K E V+ATKV G VKWF+VK+GYGFI + EDVF+H IK NNPRK +++ +GET
Sbjct: 53 KPEKKVIATKVLGTVKWFNVKNGYGFINRNDTKEDVFIHQTAIKKNNPRKYLRSVGDGET 112
Query: 84 VEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
VEFD+++G+KG EA NVTGPDG VQGS++AA++ +Y R
Sbjct: 113 VEFDVVEGEKGAEAANVTGPDGAAVQGSRYAADRGRYRR 151
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 191 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 250
K E V+ATKV G VKWF+VK+GYGFI + EDVF+H IK NNPRK +++ +GET
Sbjct: 53 KPEKKVIATKVLGTVKWFNVKNGYGFINRNDTKEDVFIHQTAIKKNNPRKYLRSVGDGET 112
Query: 251 VEFDIMQGDKGNQFCFV 267
VEFD+++G+KG + V
Sbjct: 113 VEFDVVEGEKGAEAANV 129
>gi|291224890|ref|XP_002732435.1| PREDICTED: cold shock domain protein A short-like [Saccoglossus
kowalevskii]
Length = 283
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 78/103 (75%), Gaps = 4/103 (3%)
Query: 18 SANESPKK----EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRK 73
S+ + P+K E +LA KV G VKWF+VK+GYGFI +NEDVFVH IK NNPRK
Sbjct: 4 SSEQQPEKSVALEKKILAEKVSGTVKWFNVKNGYGFINRNDTNEDVFVHQTAIKKNNPRK 63
Query: 74 LYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG+EA NVTGP+G VQGS++AA+
Sbjct: 64 YLRSVGDGETVEFDVVEGEKGNEAANVTGPEGAPVQGSKYAAD 106
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 4/88 (4%)
Query: 185 SASESPKK----EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRK 240
S+ + P+K E +LA KV G VKWF+VK+GYGFI +NEDVFVH IK NNPRK
Sbjct: 4 SSEQQPEKSVALEKKILAEKVSGTVKWFNVKNGYGFINRNDTNEDVFVHQTAIKKNNPRK 63
Query: 241 LYKTLAEGETVEFDIMQGDKGNQFCFVL 268
+++ +GETVEFD+++G+KGN+ V
Sbjct: 64 YLRSVGDGETVEFDVVEGEKGNEAANVT 91
>gi|325297104|ref|NP_001191560.1| Y-box factor homolog [Aplysia californica]
gi|1175568|sp|P41824.1|YBOXH_APLCA RecName: Full=Y-box factor homolog; AltName: Full=APY1
gi|409419|gb|AAA60373.1| Y-Box factor [Aplysia californica]
Length = 253
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Query: 3 MCDSGTKAEATPSNPSANESP-KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFV 61
M D+ + E + P ++ +KE ++A++V G VKWF+VKSGYGFI + EDVFV
Sbjct: 1 MADTEKQPEVEENQPDQEQNEEQKEKKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVFV 60
Query: 62 HSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYN 121
H I NNPRK +++ +GE VEFD+++G+KG+EA NVTGP+G +VQGS++AA++ ++
Sbjct: 61 HQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPEGSNVQGSKYAADRRRFR 120
Query: 122 R 122
R
Sbjct: 121 R 121
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 170 MCDSGTKAEATPSNPSASESP-KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFV 228
M D+ + E + P ++ +KE ++A++V G VKWF+VKSGYGFI + EDVFV
Sbjct: 1 MADTEKQPEVEENQPDQEQNEEQKEKKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVFV 60
Query: 229 HSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
H I NNPRK +++ +GE VEFD+++G+KGN+ V
Sbjct: 61 HQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANV 99
>gi|195173115|ref|XP_002027340.1| GL15684 [Drosophila persimilis]
gi|198465413|ref|XP_002134972.1| GA23502 [Drosophila pseudoobscura pseudoobscura]
gi|194113183|gb|EDW35226.1| GL15684 [Drosophila persimilis]
gi|198150149|gb|EDY73599.1| GA23502 [Drosophila pseudoobscura pseudoobscura]
Length = 335
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 86/131 (65%), Gaps = 8/131 (6%)
Query: 2 QMCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFV 61
Q D G + E P+ P PK+ ++ATKV G VKWF+VKSGYGFI + EDVFV
Sbjct: 25 QQEDDGQQGEGKPAPP-----PKE---IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFV 76
Query: 62 HSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYN 121
H I NNP+K +++ +GE VEFD++ G+KG+EA NVTGP G V+GSQFAA+K +
Sbjct: 77 HQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 136
Query: 122 RRKAKANKRKR 132
R K N R++
Sbjct: 137 RPWMKKNTRRK 147
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 8/99 (8%)
Query: 169 QMCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFV 228
Q D G + E P+ P PK+ ++ATKV G VKWF+VKSGYGFI + EDVFV
Sbjct: 25 QQEDDGQQGEGKPAPP-----PKE---IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFV 76
Query: 229 HSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
H I NNP+K +++ +GE VEFD++ G+KGN+ V
Sbjct: 77 HQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANV 115
>gi|195327031|ref|XP_002030225.1| GM24682 [Drosophila sechellia]
gi|194119168|gb|EDW41211.1| GM24682 [Drosophila sechellia]
Length = 1378
Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats.
Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 53 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 110
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRK 131
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK
Sbjct: 111 VVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRK 159
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 53 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 110
Query: 250 TVEFDIMQGDKGNQ 263
VEFD++ G+KGN+
Sbjct: 111 VVEFDVVIGEKGNE 124
>gi|240849145|ref|NP_001155549.1| Y-box protein Ct-p40-like [Acyrthosiphon pisum]
gi|239788387|dbj|BAH70879.1| ACYPI003867 [Acyrthosiphon pisum]
Length = 305
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 80/108 (74%), Gaps = 4/108 (3%)
Query: 21 ESPKKEPV----VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 76
E P ++PV V++ KV GVVKWF+VKSGYGFI + ED+FVH I NNP+K+ +
Sbjct: 11 ERPPQKPVAQKPVISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVR 70
Query: 77 TLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRK 124
++ +GETVEFD+++G+KGHEA NVTGPDG V+GS +AA + + N R+
Sbjct: 71 SVGDGETVEFDVVEGEKGHEAANVTGPDGEAVKGSPYAAERRRNNYRQ 118
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Query: 187 SESPKKEPV----VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY 242
+E P ++PV V++ KV GVVKWF+VKSGYGFI + ED+FVH I NNP+K+
Sbjct: 10 TERPPQKPVAQKPVISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIV 69
Query: 243 KTLAEGETVEFDIMQGDKGNQFCFVL 268
+++ +GETVEFD+++G+KG++ V
Sbjct: 70 RSVGDGETVEFDVVEGEKGHEAANVT 95
>gi|148235020|ref|NP_001091543.1| DNA-binding protein A [Bos taurus]
gi|146186540|gb|AAI40645.1| CSDA protein [Bos taurus]
gi|296487252|tpg|DAA29365.1| TPA: cold shock domain protein A [Bos taurus]
Length = 376
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 78/105 (74%)
Query: 12 ATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNP 71
A P++ +A S E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNP
Sbjct: 75 AAPASSAAVGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNP 134
Query: 72 RKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
RK +++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 135 RKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 179
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 62/89 (69%)
Query: 179 ATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNP 238
A P++ +A S E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNP
Sbjct: 75 AAPASSAAVGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNP 134
Query: 239 RKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
RK +++ +GETVEFD+++G+KG + V
Sbjct: 135 RKYLRSVGDGETVEFDVVEGEKGAEAANV 163
>gi|395516174|ref|XP_003762268.1| PREDICTED: uncharacterized protein LOC100914110 [Sarcophilus
harrisii]
Length = 255
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 74/100 (74%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE
Sbjct: 38 PSGEKKVLATKVWGTVKWFNVRNGYGFINRDDTKEDVFVHQTAIKKNNPRKYLRSVGDGE 97
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
VEFD+++G+KG EA NVTGP G VQGS++AA++ +Y R
Sbjct: 98 PVEFDVVEGEKGVEAANVTGPGGAPVQGSKYAADRSEYRR 137
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE
Sbjct: 38 PSGEKKVLATKVWGTVKWFNVRNGYGFINRDDTKEDVFVHQTAIKKNNPRKYLRSVGDGE 97
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD+++G+KG + V
Sbjct: 98 PVEFDVVEGEKGVEAANV 115
>gi|20806532|ref|NP_035863.1| DNA-binding protein A short isoform [Mus musculus]
gi|10185725|gb|AAG14419.1|AF248547_1 Y-box protein 3 short isoform [Mus musculus]
gi|38382730|gb|AAH62377.1| Cold shock domain protein A [Mus musculus]
Length = 292
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANV 149
>gi|148688939|gb|EDL20886.1| cold shock domain protein A, isoform CRA_b [Mus musculus]
Length = 292
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANV 149
>gi|386781556|ref|NP_114185.3| DNA-binding protein A [Rattus norvegicus]
gi|6166111|sp|Q62764.1|DBPA_RAT RecName: Full=DNA-binding protein A; AltName: Full=Cold shock
domain-containing protein A; AltName: Full=Muscle Y-box
protein YB2; AltName: Full=RYB-A; AltName:
Full=Y-box-binding protein A
gi|1101884|gb|AAB60520.1| YB2 [Rattus norvegicus]
gi|1589174|prf||2210343A nicotinic acetylcholine receptor repressor
Length = 361
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ +E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGSEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ SE +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGSEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANV 149
>gi|148688938|gb|EDL20885.1| cold shock domain protein A, isoform CRA_a [Mus musculus]
Length = 405
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 110 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 167
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 168 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 209
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 110 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 167
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 168 LRSVGDGETVEFDVVEGEKGAEAANV 193
>gi|51494815|gb|AAH27785.1| Csda protein [Mus musculus]
Length = 299
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANV 149
>gi|14602477|gb|AAH09744.1| CSDA protein [Homo sapiens]
Length = 303
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK ++L +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAAD 173
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK ++L +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 146 VEGEKGAEAANV 157
>gi|7385223|gb|AAF61741.1| RNA binding protein MSY4 [Mus musculus]
Length = 361
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANV 149
>gi|532211|gb|AAC34193.1| Y-box binding protein [Mus musculus]
Length = 274
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
Query: 17 PSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 76
P P+K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 54 PRGRRGPEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 111
Query: 77 TLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 112 SVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 151
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 184 PSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 243
P P+K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 54 PRGRRGPEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 111
Query: 244 TLAEGETVEFDIMQGDKGNQFCFV 267
++ +GETVEFD+++G+KG + V
Sbjct: 112 SVGDGETVEFDVVEGEKGAEAANV 135
>gi|47059495|ref|NP_620817.2| DNA-binding protein A long isoform [Mus musculus]
gi|61212920|sp|Q9JKB3.2|DBPA_MOUSE RecName: Full=DNA-binding protein A; AltName: Full=Cold shock
domain-containing protein A; AltName: Full=Y-box protein
3
gi|29387050|gb|AAH48242.1| Cold shock domain protein A [Mus musculus]
gi|76779326|gb|AAI05779.1| Cold shock domain protein A [Rattus norvegicus]
Length = 361
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANV 149
>gi|10185723|gb|AAG14418.1|AF248546_1 Y-box protein 3 long isoform [Mus musculus]
Length = 361
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANV 149
>gi|1160331|dbj|BAA03376.1| dbpA murine homologue [Mus musculus]
Length = 308
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 123
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 124 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 177 AEATPSNPSASESP----KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKR 232
+A P AS +P E VLATKV G VKWF+V++GYGFI + EDVFVH
Sbjct: 55 GDAAPGPAPASSAPAGGEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTA 114
Query: 233 IKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 115 IKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANV 149
>gi|395862756|ref|XP_003804032.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein A [Otolemur
garnettii]
Length = 558
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 255 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 312
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 313 LRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 354
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ E +K+ VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 255 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY 312
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 313 LRSVGDGETVEFDVVEGEKGAEAANV 338
>gi|74007477|ref|XP_549034.2| PREDICTED: DNA-binding protein A-like [Canis lupus familiaris]
Length = 315
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 77/106 (72%), Gaps = 3/106 (2%)
Query: 17 PSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 76
P + P+K V+A +V G VKWF+VK+GYGFI+ + EDVFVH I NNP K +
Sbjct: 11 PGEGKVPQK---VIAKRVRGSVKWFNVKNGYGFISRHDTQEDVFVHQTAITRNNPHKYQR 67
Query: 77 TLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
++ +GETVEFD++QG++G EA NVTGP G VQGS++AAN+P++ R
Sbjct: 68 SVGDGETVEFDVVQGERGTEAANVTGPAGAPVQGSRYAANRPRFRR 113
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+A +V G VKWF+VK+GYGFI+ + EDVFVH I NNP K +++ +GETVEFD+
Sbjct: 20 VIAKRVRGSVKWFNVKNGYGFISRHDTQEDVFVHQTAITRNNPHKYQRSVGDGETVEFDV 79
Query: 256 MQGDKGNQFCFV 267
+QG++G + V
Sbjct: 80 VQGERGTEAANV 91
>gi|62859889|ref|NP_001016677.1| Y box binding protein 1 [Xenopus (Silurana) tropicalis]
gi|89267862|emb|CAJ82694.1| Nuclease sensitive element binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|89268717|emb|CAJ83277.1| Nuclease sensitive element binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|213624244|gb|AAI70833.1| Y box binding protein 1 [Xenopus (Silurana) tropicalis]
gi|213625546|gb|AAI70835.1| Y box binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 306
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 76/103 (73%), Gaps = 3/103 (2%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 85
E V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVE
Sbjct: 29 EKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 88
Query: 86 FDIMQGDKGHEAINVTGPDGRHVQGSQFAANK---PKYNRRKA 125
FD+++G+KG EA NVTGP G VQGS++AA++ +Y RR+
Sbjct: 89 FDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHFRRYQRRRG 131
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 184 PSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 243
P+A+ KK V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 23 PAATVGEKK---VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 79
Query: 244 TLAEGETVEFDIMQGDKGNQFCFVL 268
++ +GETVEFD+++G+KG + V
Sbjct: 80 SVGDGETVEFDVVEGEKGAEAANVT 104
>gi|24663131|ref|NP_524033.2| ypsilon schachtel, isoform A [Drosophila melanogaster]
gi|16769538|gb|AAL28988.1| LD37574p [Drosophila melanogaster]
gi|23096153|gb|AAF49961.3| ypsilon schachtel, isoform A [Drosophila melanogaster]
Length = 352
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 53 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 110
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRK 131
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK
Sbjct: 111 VVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRK 159
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 53 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 110
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 111 VVEFDVVIGEKGNEAANV 128
>gi|195589720|ref|XP_002084597.1| GD12750 [Drosophila simulans]
gi|194196606|gb|EDX10182.1| GD12750 [Drosophila simulans]
Length = 352
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 53 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 110
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRK 131
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK
Sbjct: 111 VVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRK 159
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 53 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 110
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 111 VVEFDVVIGEKGNEAANV 128
>gi|195493731|ref|XP_002094541.1| GE20150 [Drosophila yakuba]
gi|194180642|gb|EDW94253.1| GE20150 [Drosophila yakuba]
Length = 353
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 54 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 111
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRK 131
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK
Sbjct: 112 VVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRK 160
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 54 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 111
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 112 VVEFDVVIGEKGNEAANV 129
>gi|344267606|ref|XP_003405657.1| PREDICTED: DNA-binding protein A-like isoform 2 [Loxodonta
africana]
Length = 299
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 72/95 (75%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
S E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +G
Sbjct: 76 SEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDG 135
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
ETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 136 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 170
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 56/79 (70%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
S E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +G
Sbjct: 76 SEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDG 135
Query: 249 ETVEFDIMQGDKGNQFCFV 267
ETVEFD+++G+KG + V
Sbjct: 136 ETVEFDVVEGEKGAEAANV 154
>gi|194751983|ref|XP_001958302.1| GF10852 [Drosophila ananassae]
gi|190625584|gb|EDV41108.1| GF10852 [Drosophila ananassae]
Length = 347
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 52 PPKE--IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 109
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRK 131
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK
Sbjct: 110 VVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRK 158
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 52 PPKE--IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 109
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 110 VVEFDVVIGEKGNEAANV 127
>gi|426383887|ref|XP_004058508.1| PREDICTED: Y-box-binding protein 2 [Gorilla gorilla gorilla]
Length = 359
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 81/115 (70%), Gaps = 3/115 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N+ K R
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRKSRR 183
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNV 161
>gi|114666139|ref|XP_511973.2| PREDICTED: Y-box-binding protein 2 [Pan troglodytes]
Length = 365
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 81/115 (70%), Gaps = 3/115 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N+ K R
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRKSRR 183
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVT 162
>gi|386771001|ref|NP_001246730.1| ypsilon schachtel, isoform B [Drosophila melanogaster]
gi|383291886|gb|AFH04401.1| ypsilon schachtel, isoform B [Drosophila melanogaster]
Length = 340
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 53 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 110
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRK 131
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK
Sbjct: 111 VVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRK 159
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 53 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGE 110
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 111 VVEFDVVIGEKGNEAANV 128
>gi|158295359|ref|XP_001237771.2| AGAP006108-PA [Anopheles gambiae str. PEST]
gi|157015999|gb|EAU76557.2| AGAP006108-PA [Anopheles gambiae str. PEST]
Length = 402
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 80/114 (70%), Gaps = 6/114 (5%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P+KE V+ATKV GVVKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 79 PQKE--VIATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGE 136
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRR 136
VEFD++ G+KG+EA NVTGP G V+GSQ+AA K RR + +KR RR
Sbjct: 137 QVEFDVVIGEKGNEAANVTGPQGEPVKGSQYAAEK----RRGFRHWWQKRGQRR 186
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P+KE V+ATKV GVVKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 79 PQKE--VIATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGE 136
Query: 250 TVEFDIMQGDKGNQFCFVL 268
VEFD++ G+KGN+ V
Sbjct: 137 QVEFDVVIGEKGNEAANVT 155
>gi|296227166|ref|XP_002759249.1| PREDICTED: Y-box-binding protein 2-like, partial [Callithrix
jacchus]
Length = 253
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 79/112 (70%), Gaps = 3/112 (2%)
Query: 5 DSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 64
+ GT A TP+ P+ N++ K VLA +V G VKWF+V++GYGFI+ + EDVFVH
Sbjct: 69 NPGTAASGTPTPPARNQADKP---VLAIRVLGTVKWFNVRNGYGFISRNDTKEDVFVHQT 125
Query: 65 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
IK NNPRK +++ +GETVEFD++ G+KG EA NVTGP G V+GS +A N
Sbjct: 126 AIKRNNPRKFLRSVGDGETVEFDVVGGEKGPEAANVTGPGGVPVKGSCYAPN 177
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 172 DSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 231
+ GT A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI+ + EDVFVH
Sbjct: 69 NPGTAASGTPTPPARNQADKP---VLAIRVLGTVKWFNVRNGYGFISRNDTKEDVFVHQT 125
Query: 232 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
IK NNPRK +++ +GETVEFD++ G+KG + V
Sbjct: 126 AIKRNNPRKFLRSVGDGETVEFDVVGGEKGPEAANV 161
>gi|397519089|ref|XP_003829704.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein A [Pan
paniscus]
Length = 594
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 311 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 370
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 371 VEGEKGAEAANVTGPDGVPVEGSRYAAD 398
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 311 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 370
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 371 VEGEKGAEAANV 382
>gi|321477873|gb|EFX88831.1| hypothetical protein DAPPUDRAFT_311200 [Daphnia pulex]
Length = 322
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 73/105 (69%)
Query: 12 ATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNP 71
A P N + E V+ATKV GVVKWF+VKSGYGFI + ED+FVH I NNP
Sbjct: 2 ADPENQPEQQKAAPEKQVIATKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQTAISRNNP 61
Query: 72 RKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
RK +++ +GE VEFD++ G+KGHEA NVTGP+G V+GS +AA+
Sbjct: 62 RKAVRSVGDGEIVEFDVVVGEKGHEAANVTGPEGEPVKGSPYAAD 106
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 179 ATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNP 238
A P N + E V+ATKV GVVKWF+VKSGYGFI + ED+FVH I NNP
Sbjct: 2 ADPENQPEQQKAAPEKQVIATKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQTAISRNNP 61
Query: 239 RKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
RK +++ +GE VEFD++ G+KG++ V
Sbjct: 62 RKAVRSVGDGEIVEFDVVVGEKGHEAANVT 91
>gi|344267604|ref|XP_003405656.1| PREDICTED: DNA-binding protein A-like isoform 1 [Loxodonta
africana]
Length = 368
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 83 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 142
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 143 VEGEKGAEAANVTGPDGVPVEGSRYAAD 170
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 83 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 142
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 143 VEGEKGAEAANV 154
>gi|195128621|ref|XP_002008760.1| GI13673 [Drosophila mojavensis]
gi|193920369|gb|EDW19236.1| GI13673 [Drosophila mojavensis]
Length = 335
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 37 PPKE--IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 94
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRRNN 138
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK+ +N
Sbjct: 95 LVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRKQPGEGDN 150
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 37 PPKE--IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 94
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 95 LVEFDVVIGEKGNEAANV 112
>gi|384949962|gb|AFI38586.1| DNA-binding protein A isoform b [Macaca mulatta]
Length = 303
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
Query: 17 PSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 76
P + ++ KK VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 77 PGSEDAEKK---VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 133
Query: 77 TLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 134 SVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 173
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Query: 184 PSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 243
P + ++ KK VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 77 PGSEDAEKK---VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 133
Query: 244 TLAEGETVEFDIMQGDKGNQFCFV 267
++ +GETVEFD+++G+KG + V
Sbjct: 134 SVGDGETVEFDVVEGEKGAEAANV 157
>gi|335288453|ref|XP_003355623.1| PREDICTED: DNA-binding protein A-like isoform 2 [Sus scrofa]
Length = 312
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 95 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 154
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 155 VEGEKGAEAANVTGPDGVPVEGSRYAAD 182
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 95 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 154
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 155 VEGEKGAEAANV 166
>gi|384949960|gb|AFI38585.1| DNA-binding protein A isoform a [Macaca mulatta]
gi|387540426|gb|AFJ70840.1| DNA-binding protein A isoform a [Macaca mulatta]
Length = 372
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
Query: 17 PSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 76
P + ++ KK VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 77 PGSEDAEKK---VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 133
Query: 77 TLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 134 SVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 173
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Query: 184 PSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 243
P + ++ KK VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 77 PGSEDAEKK---VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 133
Query: 244 TLAEGETVEFDIMQGDKGNQFCFV 267
++ +GETVEFD+++G+KG + V
Sbjct: 134 SVGDGETVEFDVVEGEKGAEAANV 157
>gi|384949958|gb|AFI38584.1| DNA-binding protein A isoform a [Macaca mulatta]
Length = 371
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
Query: 17 PSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 76
P + ++ KK VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 76 PGSEDAEKK---VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 132
Query: 77 TLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 133 SVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 172
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Query: 184 PSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 243
P + ++ KK VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 76 PGSEDAEKK---VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 132
Query: 244 TLAEGETVEFDIMQGDKGNQFCFV 267
++ +GETVEFD+++G+KG + V
Sbjct: 133 SVGDGETVEFDVVEGEKGAEAANV 156
>gi|195379482|ref|XP_002048507.1| GJ14010 [Drosophila virilis]
gi|194155665|gb|EDW70849.1| GJ14010 [Drosophila virilis]
Length = 340
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 37 PPKE--IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 94
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRRNN 138
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK+ +N
Sbjct: 95 LVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRKQPGEGDN 150
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 37 PPKE--IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 94
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 95 LVEFDVVIGEKGNEAANV 112
>gi|403286765|ref|XP_003934646.1| PREDICTED: DNA-binding protein A [Saimiri boliviensis boliviensis]
Length = 379
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 96 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 155
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 156 VEGEKGAEAANVTGPDGVPVEGSRYAAD 183
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 96 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 155
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 156 VEGEKGAEAANV 167
>gi|354496982|ref|XP_003510602.1| PREDICTED: DNA-binding protein A-like [Cricetulus griseus]
Length = 359
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 76 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 135
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 136 VEGEKGAEAANVTGPDGVPVEGSRYAAD 163
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 76 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 135
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 136 VEGEKGAEAANV 147
>gi|395743965|ref|XP_003778021.1| PREDICTED: DNA-binding protein A isoform 2 [Pongo abelii]
Length = 302
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 85 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 144
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 145 VEGEKGAEAANVTGPDGVPVEGSRYAAD 172
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 85 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 144
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 145 VEGEKGAEAANV 156
>gi|426371672|ref|XP_004052766.1| PREDICTED: DNA-binding protein A isoform 2 [Gorilla gorilla
gorilla]
gi|410332671|gb|JAA35282.1| cold shock domain protein A [Pan troglodytes]
Length = 304
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 87 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 146
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 147 VEGEKGAEAANVTGPDGVPVEGSRYAAD 174
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 87 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 146
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 147 VEGEKGAEAANV 158
>gi|334333673|ref|XP_001376438.2| PREDICTED: nuclease-sensitive element-binding protein 1-like
[Monodelphis domestica]
Length = 322
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 73/98 (74%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE
Sbjct: 38 PSGEKKVLATKVWGTVKWFNVRNGYGFINRDDTKEDVFVHQTAIKKNNPRKYLRSVGDGE 97
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKY 120
VEFD+++G+KG EA NVTGP G VQGS++AA++ +Y
Sbjct: 98 PVEFDVVEGEKGVEAANVTGPGGAPVQGSKYAADRSEY 135
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE
Sbjct: 38 PSGEKKVLATKVWGTVKWFNVRNGYGFINRDDTKEDVFVHQTAIKKNNPRKYLRSVGDGE 97
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD+++G+KG + V
Sbjct: 98 PVEFDVVEGEKGVEAANV 115
>gi|332838569|ref|XP_003313542.1| PREDICTED: DNA-binding protein A isoform 1 [Pan troglodytes]
gi|410224322|gb|JAA09380.1| cold shock domain protein A [Pan troglodytes]
Length = 305
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 148 VEGEKGAEAANVTGPDGVPVEGSRYAAD 175
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 148 VEGEKGAEAANV 159
>gi|224586884|ref|NP_001138898.1| DNA-binding protein A isoform b [Homo sapiens]
gi|16198465|gb|AAH15913.1| CSDA protein [Homo sapiens]
gi|119616609|gb|EAW96203.1| cold shock domain protein A, isoform CRA_b [Homo sapiens]
gi|119616610|gb|EAW96204.1| cold shock domain protein A, isoform CRA_b [Homo sapiens]
Length = 303
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAAD 173
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 146 VEGEKGAEAANV 157
>gi|402885169|ref|XP_003906038.1| PREDICTED: DNA-binding protein A [Papio anubis]
Length = 372
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAAD 173
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 146 VEGEKGAEAANV 157
>gi|50978844|ref|NP_001003127.1| DNA-binding protein A [Canis lupus familiaris]
gi|8100510|gb|AAF72335.1|AF171061_1 Y-box protein ZONAB-A [Canis lupus familiaris]
Length = 304
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHHTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 148 VEGEKGAEAANVTGPDGVPVEGSRYAAD 175
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHHTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 148 VEGEKGAEAANV 159
>gi|14250672|gb|AAH08801.1| Cold shock domain protein A [Homo sapiens]
gi|18314511|gb|AAH21926.1| Cold shock domain protein A [Homo sapiens]
gi|123984533|gb|ABM83612.1| cold shock domain protein A [synthetic construct]
gi|123998509|gb|ABM86856.1| cold shock domain protein A [synthetic construct]
gi|208966070|dbj|BAG73049.1| cold shock domain protein A [synthetic construct]
Length = 372
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAAD 173
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 146 VEGEKGAEAANV 157
>gi|343961249|dbj|BAK62214.1| DNA-binding protein A [Pan troglodytes]
Length = 374
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 148 VEGEKGAEAANVTGPDGVPVEGSRYAAD 175
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 148 VEGEKGAEAANV 159
>gi|426371670|ref|XP_004052765.1| PREDICTED: DNA-binding protein A isoform 1 [Gorilla gorilla
gorilla]
gi|410224324|gb|JAA09381.1| cold shock domain protein A [Pan troglodytes]
gi|410332669|gb|JAA35281.1| cold shock domain protein A [Pan troglodytes]
Length = 373
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 87 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 146
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 147 VEGEKGAEAANVTGPDGVPVEGSRYAAD 174
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 87 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 146
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 147 VEGEKGAEAANV 158
>gi|332838567|ref|XP_520744.3| PREDICTED: DNA-binding protein A isoform 2 [Pan troglodytes]
gi|410224320|gb|JAA09379.1| cold shock domain protein A [Pan troglodytes]
gi|410332673|gb|JAA35283.1| cold shock domain protein A [Pan troglodytes]
Length = 374
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 148 VEGEKGAEAANVTGPDGVPVEGSRYAAD 175
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 148 VEGEKGAEAANV 159
>gi|224586882|ref|NP_003642.3| DNA-binding protein A isoform a [Homo sapiens]
gi|97536050|sp|P16989.4|DBPA_HUMAN RecName: Full=DNA-binding protein A; AltName: Full=Cold shock
domain-containing protein A; AltName: Full=Single-strand
DNA-binding protein NF-GMB
gi|1167838|emb|CAA64631.1| DNA-binding protein [Homo sapiens]
gi|15026972|emb|CAA51261.1| cold shock domain protein A [Homo sapiens]
gi|15990406|gb|AAH15564.1| Cold shock domain protein A [Homo sapiens]
gi|119616607|gb|EAW96201.1| cold shock domain protein A, isoform CRA_a [Homo sapiens]
gi|119616608|gb|EAW96202.1| cold shock domain protein A, isoform CRA_a [Homo sapiens]
gi|189054724|dbj|BAG37363.1| unnamed protein product [Homo sapiens]
Length = 372
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAAD 173
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 146 VEGEKGAEAANV 157
>gi|301789934|ref|XP_002930376.1| PREDICTED: DNA-binding protein A-like [Ailuropoda melanoleuca]
Length = 335
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 51 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 111 VEGEKGAEAANVTGPDGVPVEGSRYAAD 138
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 51 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 111 VEGEKGAEAANV 122
>gi|311256155|ref|XP_003126523.1| PREDICTED: DNA-binding protein A-like isoform 1 [Sus scrofa]
Length = 380
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 95 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 154
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 155 VEGEKGAEAANVTGPDGVPVEGSRYAAD 182
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 95 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 154
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 155 VEGEKGAEAANV 166
>gi|297691167|ref|XP_002822965.1| PREDICTED: DNA-binding protein A isoform 1 [Pongo abelii]
Length = 371
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 85 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 144
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 145 VEGEKGAEAANVTGPDGVPVEGSRYAAD 172
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 85 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 144
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 145 VEGEKGAEAANV 156
>gi|291411891|ref|XP_002722201.1| PREDICTED: cold shock domain protein A [Oryctolagus cuniculus]
Length = 376
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 91 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 150
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 151 VEGEKGAEAANVTGPDGVPVEGSRYAAD 178
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 91 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 150
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 151 VEGEKGAEAANV 162
>gi|426226980|ref|XP_004023365.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein A-like, partial
[Ovis aries]
Length = 270
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 11 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 70
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 71 VEGEKGAEAANVTGPDGVPVEGSRYAAD 98
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 11 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 70
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 71 VEGEKGAEAANV 82
>gi|140245|sp|P21573.1|YBOX1_XENLA RecName: Full=Nuclease-sensitive element-binding protein 1;
AltName: Full=Y-box transcription factor; AltName:
Full=Y-box-binding protein 1; Short=YB-1
gi|214155|gb|AAA49715.1| DNA-binding protein [Xenopus laevis]
Length = 303
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 32 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP+G VQGS++AA+
Sbjct: 92 VEGEKGAEAANVTGPEGVPVQGSKYAAD 119
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 32 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 91
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 92 VEGEKGAEAANVT 104
>gi|181484|gb|AAA35749.1| DNA-binding protein A, partial [Homo sapiens]
Length = 412
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 216 VEGEKGAEAANVTGPDGVPVEGSRYAAD 243
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 216 VEGEKGAEAANV 227
>gi|2970679|gb|AAC06034.1| Y box protein [Drosophila silvestris]
Length = 342
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 39 PPKE--LIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 96
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKS 134
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK++
Sbjct: 97 LVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRKQEG 148
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 39 PPKE--LIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 96
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 97 LVEFDVVIGEKGNEAANV 114
>gi|195020347|ref|XP_001985176.1| GH16919 [Drosophila grimshawi]
gi|193898658|gb|EDV97524.1| GH16919 [Drosophila grimshawi]
Length = 345
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 39 PPKE--LIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 96
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKS 134
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK++
Sbjct: 97 LVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRKQEG 148
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 39 PPKE--LIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 96
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 97 LVEFDVVIGEKGNEAANV 114
>gi|62089378|dbj|BAD93133.1| CSDA protein variant [Homo sapiens]
Length = 134
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 72/95 (75%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
S E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +G
Sbjct: 12 SEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDG 71
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
ETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 72 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 106
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
S E VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +G
Sbjct: 12 SEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDG 71
Query: 249 ETVEFDIMQGDKG 261
ETVEFD+++G+KG
Sbjct: 72 ETVEFDVVEGEKG 84
>gi|147903761|ref|NP_001079367.1| nuclease-sensitive element-binding protein 1 [Xenopus laevis]
gi|27370848|gb|AAH41191.1| Ybx1 protein [Xenopus laevis]
gi|76779926|gb|AAI06324.1| Ybx1 protein [Xenopus laevis]
Length = 303
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 32 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP+G VQGS++AA+
Sbjct: 92 VEGEKGAEAANVTGPEGVPVQGSKYAAD 119
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 32 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 91
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 92 VEGEKGAEAANVT 104
>gi|147901492|ref|NP_001081167.1| Y-box-binding protein 2-B [Xenopus laevis]
gi|214642|gb|AAA49924.1| p54 [Xenopus laevis]
Length = 324
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+LAT+V G VKWF+V++GYGFI S EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 LLATQVQGTVKWFNVRNGYGFINRNDSKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 96
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++G+KG EA NVTGP G V+GS+FA N ++ R+
Sbjct: 97 VEGEKGAEAANVTGPGGVPVKGSRFAPNSTRFRRQ 131
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+LAT+V G VKWF+V++GYGFI S EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 LLATQVQGTVKWFNVRNGYGFINRNDSKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 96
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 97 VEGEKGAEAANVT 109
>gi|8100512|gb|AAF72336.1|AF171062_1 Y-box protein ZONAB-B [Canis lupus familiaris]
Length = 372
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHHTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 148 VEGEKGAEAANVTGPDGVPVEGSRYAAD 175
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 88 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHHTAIKKNNPRKYLRSVGDGETVEFDV 147
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 148 VEGEKGAEAANV 159
>gi|109095654|ref|XP_001118505.1| PREDICTED: DNA-binding protein A-like [Macaca mulatta]
Length = 407
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 121 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 180
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 181 VEGEKGAEAANVTGPDGVPVEGSRYAAD 208
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 121 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 180
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 181 VEGEKGAEAANV 192
>gi|355563999|gb|EHH20499.1| Cold shock domain-containing protein A, partial [Macaca mulatta]
Length = 287
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+LATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 ILATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 60
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 61 VEGEKGAEAANVTGPDGVPVEGSRYAAD 88
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+LATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 ILATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 60
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 61 VEGEKGAEAANV 72
>gi|395533601|ref|XP_003768844.1| PREDICTED: Y-box-binding protein 2 [Sarcophilus harrisii]
Length = 345
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 76/110 (69%)
Query: 7 GTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI 66
G A P P+ + + + VLAT+V G VKWF+V++GYGFI + EDVFVH I
Sbjct: 4 GAPTTAAPGTPAPHARSQADKPVLATQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI 63
Query: 67 KYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
K NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 64 KRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 113
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%)
Query: 174 GTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI 233
G A P P+ + + VLAT+V G VKWF+V++GYGFI + EDVFVH I
Sbjct: 4 GAPTTAAPGTPAPHARSQADKPVLATQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI 63
Query: 234 KYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
K NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 64 KRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 97
>gi|355785893|gb|EHH66076.1| Cold shock domain-containing protein A, partial [Macaca
fascicularis]
Length = 287
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+LATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 ILATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 60
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 61 VEGEKGAEAANVTGPDGVPVEGSRYAAD 88
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+LATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 ILATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 60
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 61 VEGEKGAEAANV 72
>gi|440892787|gb|ELR45831.1| DNA-binding protein A, partial [Bos grunniens mutus]
Length = 285
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+LATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 ILATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 60
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 61 VEGEKGAEAANVTGPDGVPVEGSRYAAD 88
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+LATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 ILATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 60
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 61 VEGEKGAEAANV 72
>gi|950340|gb|AAA79243.1| DNA-binding protein A [Homo sapiens]
Length = 342
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAAD 173
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 146 VEGEKGAEAANV 157
>gi|301784071|ref|XP_002927454.1| PREDICTED: hypothetical protein LOC100472801 [Ailuropoda
melanoleuca]
Length = 371
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 70/90 (77%)
Query: 27 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 86
PV+ ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEF
Sbjct: 53 PVLSATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 112
Query: 87 DIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
D+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 113 DVVEGEKGAEAANVTGPGGVPVQGSKYAAD 142
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 194 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 253
PV+ ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEF
Sbjct: 53 PVLSATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 112
Query: 254 DIMQGDKGNQFCFV 267
D+++G+KG + V
Sbjct: 113 DVVEGEKGAEAANV 126
>gi|340419|gb|AAA61308.1| Y box binding protein-1 [Homo sapiens]
Length = 317
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 114 VEGEKGEEAANVTGPGGVPVQGSKYAAD 141
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 114 VEGEKGEEAANVT 126
>gi|242000494|ref|XP_002434890.1| PIN domain-containing RNA-binding protein, putative [Ixodes
scapularis]
gi|215498220|gb|EEC07714.1| PIN domain-containing RNA-binding protein, putative [Ixodes
scapularis]
Length = 315
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 8/111 (7%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLA +V G VKWF+VK+GYGFI + ED+FVH I NNP+K+ +++ EGETVEFD+
Sbjct: 12 VLAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDV 71
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK--------PKYNRRKAKANKRK 131
+ G+KG EA NVTGPDG VQGS +AA++ P+ +R+ N R+
Sbjct: 72 VVGEKGREAANVTGPDGEPVQGSPYAADRRRFRGRWFPRRGQRRPMPNPRR 122
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLA +V G VKWF+VK+GYGFI + ED+FVH I NNP+K+ +++ EGETVEFD+
Sbjct: 12 VLAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDV 71
Query: 256 MQGDKGNQFCFV 267
+ G+KG + V
Sbjct: 72 VVGEKGREAANV 83
>gi|297278427|ref|XP_001088540.2| PREDICTED: hypothetical protein LOC700140 [Macaca mulatta]
Length = 511
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 198 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 257
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 258 VEGEKGAEAANVTGPGGVPVQGSKYAAD 285
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 198 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 257
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 258 VEGEKGAEAANV 269
>gi|189054669|dbj|BAG37519.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 71 TAVSGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 127
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N+ K R
Sbjct: 128 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRKSRR 182
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 71 TAVSGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 127
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 128 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNV 160
>gi|355731018|gb|AES10388.1| Y-box protein ZONAB-A [Mustela putorius furo]
Length = 145
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 41 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 100
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 101 VEGEKGAEAANVTGPDGVPVEGSRYAAD 128
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 41 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 100
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 101 VEGEKGAEAANV 112
>gi|181486|gb|AAA35750.1| DNA-binding protein B, partial [Homo sapiens]
Length = 364
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 154 VEGEKGAEAANVTGPGGVPVQGSKYAAD 181
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 154 VEGEKGAEAANV 165
>gi|195428579|ref|XP_002062350.1| GK16710 [Drosophila willistoni]
gi|194158435|gb|EDW73336.1| GK16710 [Drosophila willistoni]
Length = 344
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 38 PPKE--IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 95
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKR 132
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK+
Sbjct: 96 VVEFDVVIGEKGNEAANVTGPLGEPVRGSQFAADKRRNFRPWMKKNRRKQ 145
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE ++ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 38 PPKE--IIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGE 95
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 96 VVEFDVVIGEKGNEAANV 113
>gi|387019953|gb|AFJ52094.1| Y box binding protein 1 [Crotalus adamanteus]
Length = 347
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 77 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 136
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 137 VEGEKGAEAANVTGPGGVPVQGSKYAAD 164
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 77 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 136
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 137 VEGEKGAEAANVT 149
>gi|348514604|ref|XP_003444830.1| PREDICTED: B box-binding protein-like [Oreochromis niloticus]
Length = 321
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 70/89 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 35 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 94
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G+KG EA NVTGP G VQGS++AA++
Sbjct: 95 VEGEKGAEAANVTGPGGVAVQGSKYAADR 123
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 35 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 94
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 95 VEGEKGAEAANVT 107
>gi|156415990|ref|NP_057066.2| Y-box-binding protein 2 [Homo sapiens]
gi|116242847|sp|Q9Y2T7.2|YBOX2_HUMAN RecName: Full=Y-box-binding protein 2; AltName: Full=Contrin;
AltName: Full=DNA-binding protein C; Short=Dbpc;
AltName: Full=Germ cell-specific Y-box-binding protein;
AltName: Full=MSY2 homolog
gi|21707292|gb|AAH33800.1| Y box binding protein 2 [Homo sapiens]
Length = 364
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 71 TAVSGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 127
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N+ K R
Sbjct: 128 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRKSRR 182
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 71 TAVSGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 127
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 128 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVT 161
>gi|4837737|gb|AAD30662.1| germ cell specific Y-box binding protein [Homo sapiens]
gi|28838612|gb|AAH47760.1| Y box binding protein 2 [Homo sapiens]
gi|119610629|gb|EAW90223.1| Y box binding protein 2, isoform CRA_a [Homo sapiens]
gi|119610630|gb|EAW90224.1| Y box binding protein 2, isoform CRA_a [Homo sapiens]
Length = 364
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 71 TAVSGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 127
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N+ K R
Sbjct: 128 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRKSRR 182
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 71 TAVSGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 127
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 128 RNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVT 161
>gi|57086603|ref|XP_546585.1| PREDICTED: Y-box-binding protein 2 [Canis lupus familiaris]
Length = 361
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 78/109 (71%), Gaps = 3/109 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 73 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 129
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 130 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 178
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 73 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 129
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 130 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 162
>gi|117956377|ref|NP_058571.2| Y-box-binding protein 2 [Mus musculus]
gi|187954905|gb|AAI41113.1| Y box protein 2 [Mus musculus]
Length = 359
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 78/109 (71%), Gaps = 3/109 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 177
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 162
>gi|342837647|tpg|DAA34914.1| TPA_inf: Y box protein 4-like protein [Schmidtea mediterranea]
Length = 378
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 80/113 (70%), Gaps = 3/113 (2%)
Query: 11 EATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 70
+ +P+ S + + KK +LATK+ G VKWF+VKSGYGFI + ED+FVH I NN
Sbjct: 5 QTSPAERSIHPTEKK---ILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNN 61
Query: 71 PRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
PRK +++ +GE VEFD+++G+KG EA NVTGPDG VQGS++AA+K Y R
Sbjct: 62 PRKWQRSVGDGEEVEFDVVEGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSR 114
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 252
E +LATK+ G VKWF+VKSGYGFI + ED+FVH I NNPRK +++ +GE VE
Sbjct: 17 EKKILATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVE 76
Query: 253 FDIMQGDKG 261
FD+++G+KG
Sbjct: 77 FDVVEGEKG 85
>gi|27503841|gb|AAH42217.1| Nsep1 protein [Xenopus laevis]
Length = 304
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 32 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 92 VEGEKGAEAANVTGPGGVPVQGSKYAAD 119
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 184 PSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 243
P+A+ KK V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 23 PAATVGEKK---VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 79
Query: 244 TLAEGETVEFDIMQGDKGNQFCFVL 268
++ +GETVEFD+++G+KG + V
Sbjct: 80 SVGDGETVEFDVVEGEKGAEAANVT 104
>gi|344290420|ref|XP_003416936.1| PREDICTED: Y-box-binding protein 2-like [Loxodonta africana]
Length = 359
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 78/109 (71%), Gaps = 3/109 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 73 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 129
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 130 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 178
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 73 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 129
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 130 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 163
>gi|62656341|ref|XP_220618.3| PREDICTED: Y-box-binding protein 2 [Rattus norvegicus]
gi|109491139|ref|XP_001079683.1| PREDICTED: Y-box-binding protein 2 isoform 1 [Rattus norvegicus]
Length = 359
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 78/109 (71%), Gaps = 3/109 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 177
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 162
>gi|203999|gb|AAA41108.1| enhancer factor-1-alpha [Rattus norvegicus]
Length = 322
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|199821|gb|AAA63390.1| Y box transcription factor [Mus musculus]
Length = 322
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|55451|emb|CAA40847.1| Y box-binbing protein [Mus musculus]
Length = 321
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAAD 138
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 111 VEGEKGAEAANVT 123
>gi|988281|gb|AAA75475.1| mYB-1a [Mus musculus]
Length = 322
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|92373398|ref|NP_113751.3| nuclease-sensitive element-binding protein 1 [Rattus norvegicus]
gi|113205059|ref|NP_035862.2| nuclease-sensitive element-binding protein 1 [Mus musculus]
gi|51704186|sp|P62961.3|YBOX1_RAT RecName: Full=Nuclease-sensitive element-binding protein 1;
AltName: Full=CCAAT-binding transcription factor I
subunit A; Short=CBF-A; AltName: Full=DNA-binding
protein B; Short=DBPB; AltName: Full=Enhancer factor I
subunit A; Short=EFI-A; AltName: Full=Y-box
transcription factor; AltName: Full=Y-box-binding
protein 1; Short=YB-1
gi|51704189|sp|P62960.3|YBOX1_MOUSE RecName: Full=Nuclease-sensitive element-binding protein 1;
AltName: Full=CCAAT-binding transcription factor I
subunit A; Short=CBF-A; AltName: Full=DNA-binding
protein B; Short=DBPB; AltName: Full=Enhancer factor I
subunit A; Short=EFI-A; AltName: Full=Y-box
transcription factor; AltName: Full=Y-box-binding
protein 1; Short=YB-1
gi|202435|gb|AAA40577.1| Y-box binding protein 1/DNA binding protein B [Mus musculus]
gi|220895|dbj|BAA02569.1| DNA binding protein B [Rattus sp.]
gi|15488612|gb|AAH13450.1| Y box protein 1 [Mus musculus]
gi|15488999|gb|AAH13620.1| Y box protein 1 [Mus musculus]
gi|20987294|gb|AAH29747.1| Y box protein 1 [Mus musculus]
gi|21594391|gb|AAH31472.1| Y box protein 1 [Mus musculus]
gi|38197295|gb|AAH61634.1| Y box protein 1 [Mus musculus]
gi|47938951|gb|AAH72486.1| Y box binding protein 1 [Rattus norvegicus]
gi|68533639|gb|AAH98672.1| Y box binding protein 1 [Rattus norvegicus]
gi|74178193|dbj|BAE29883.1| unnamed protein product [Mus musculus]
gi|76779878|gb|AAI06144.1| Y box protein 1 [Mus musculus]
gi|120577450|gb|AAI30161.1| LOC100037035 protein [Xenopus laevis]
gi|149035444|gb|EDL90125.1| rCG50488, isoform CRA_b [Rattus norvegicus]
Length = 322
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|27807361|ref|NP_777240.1| nuclease-sensitive element-binding protein 1 [Bos taurus]
gi|34098946|ref|NP_004550.2| nuclease-sensitive element-binding protein 1 [Homo sapiens]
gi|332248504|ref|XP_003273402.1| PREDICTED: nuclease-sensitive element-binding protein 1 [Nomascus
leucogenys]
gi|332808655|ref|XP_525693.3| PREDICTED: nuclease-sensitive element-binding protein 1 [Pan
troglodytes]
gi|345780758|ref|XP_848660.2| PREDICTED: nuclease-sensitive element-binding protein 1-like [Canis
lupus familiaris]
gi|397483463|ref|XP_003812922.1| PREDICTED: nuclease-sensitive element-binding protein 1 [Pan
paniscus]
gi|402854140|ref|XP_003891736.1| PREDICTED: nuclease-sensitive element-binding protein 1 [Papio
anubis]
gi|54040030|sp|P67808.3|YBOX1_BOVIN RecName: Full=Nuclease-sensitive element-binding protein 1;
AltName: Full=CCAAT-binding transcription factor I
subunit A; Short=CBF-A; AltName: Full=DNA-binding
protein B; Short=DBPB; AltName: Full=Enhancer factor I
subunit A; Short=EFI-A; AltName: Full=Y-box
transcription factor; AltName: Full=Y-box-binding
protein 1; Short=YB-1
gi|54040031|sp|P67809.3|YBOX1_HUMAN RecName: Full=Nuclease-sensitive element-binding protein 1;
AltName: Full=CCAAT-binding transcription factor I
subunit A; Short=CBF-A; AltName: Full=DNA-binding
protein B; Short=DBPB; AltName: Full=Enhancer factor I
subunit A; Short=EFI-A; AltName: Full=Y-box
transcription factor; AltName: Full=Y-box-binding
protein 1; Short=YB-1
gi|162983|gb|AAA30497.1| transcription factor EF1(A) [Bos taurus]
gi|454152|gb|AAA20871.1| similar to dbpB protein [Homo sapiens]
gi|12803207|gb|AAH02411.1| Y box binding protein 1 [Homo sapiens]
gi|14714588|gb|AAH10430.1| Y box binding protein 1 [Homo sapiens]
gi|15929560|gb|AAH15208.1| Y box binding protein 1 [Homo sapiens]
gi|23468206|gb|AAH38384.1| Y box binding protein 1 [Homo sapiens]
gi|41350935|gb|AAH65571.1| Y box binding protein 1 [Homo sapiens]
gi|47125298|gb|AAH70084.1| Y box binding protein 1 [Homo sapiens]
gi|47940506|gb|AAH71708.1| Y box binding protein 1 [Homo sapiens]
gi|58477789|gb|AAH90038.1| Y box binding protein 1 [Homo sapiens]
gi|61359169|gb|AAX41678.1| nuclease sensitive element binding protein 1 [synthetic construct]
gi|68534659|gb|AAH98435.1| Y box binding protein 1 [Homo sapiens]
gi|76779237|gb|AAI06046.1| Y box binding protein 1 [Homo sapiens]
gi|86821283|gb|AAI05364.1| Y box binding protein 1 [Bos taurus]
gi|119627554|gb|EAX07149.1| Y box binding protein 1, isoform CRA_b [Homo sapiens]
gi|123981412|gb|ABM82535.1| Y box binding protein 1 [synthetic construct]
gi|123996253|gb|ABM85728.1| Y box binding protein 1 [synthetic construct]
gi|168277900|dbj|BAG10928.1| nuclease sensitive element-binding protein 1 [synthetic construct]
gi|296488844|tpg|DAA30957.1| TPA: nuclease-sensitive element-binding protein 1 [Bos taurus]
Length = 324
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD 141
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 114 VEGEKGAEAANVT 126
>gi|148225376|ref|NP_001087255.1| nuclease-sensitive element-binding protein 1 [Ovis aries]
gi|140326474|gb|ABO86713.1| nuclease sensitive element binding protein 1 [Ovis aries]
Length = 288
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 18 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 77
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 78 VEGEKGAEAANVTGPGGVPVQGSKYAAD 105
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 18 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 77
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 78 VEGEKGAEAANVT 90
>gi|29437175|gb|AAH49977.1| Y box protein 1 [Mus musculus]
Length = 322
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|130488167|ref|NP_001076254.1| nuclease-sensitive element-binding protein 1 [Oryctolagus
cuniculus]
gi|75069491|sp|Q28618.3|YBOX1_RABIT RecName: Full=Nuclease-sensitive element-binding protein 1;
AltName: Full=CCAAT-binding transcription factor I
subunit A; Short=CBF-A; AltName: Full=Enhancer factor I
subunit A; Short=EFI-A; AltName: Full=Y-box
transcription factor; AltName: Full=Y-box-binding
protein 1; Short=YB-1; AltName: Full=p50
gi|608518|gb|AAA66069.1| p50 [Oryctolagus cuniculus]
Length = 324
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD 141
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 114 VEGEKGAEAANVT 126
>gi|61367907|gb|AAX43065.1| nuclease sensitive element binding protein 1 [synthetic construct]
gi|61369330|gb|AAX43318.1| nuclease sensitive element binding protein 1 [synthetic construct]
Length = 325
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD 141
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 114 VEGEKGAEAANVT 126
>gi|344287276|ref|XP_003415379.1| PREDICTED: nuclease-sensitive element-binding protein 1-like
[Loxodonta africana]
Length = 419
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 150 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 209
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 210 VEGEKGAEAANVTGPGGVPVQGSKYAAD 237
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 150 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 209
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 210 VEGEKGAEAANV 221
>gi|426329192|ref|XP_004025626.1| PREDICTED: nuclease-sensitive element-binding protein 1 [Gorilla
gorilla gorilla]
Length = 355
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD 141
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 114 VEGEKGAEAANV 125
>gi|390463006|ref|XP_002748032.2| PREDICTED: Y-box-binding protein 2 [Callithrix jacchus]
Length = 364
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 78/109 (71%), Gaps = 3/109 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 78 TAASGTPTPPARSQADKP---VLAIRVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 134
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 135 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 183
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 78 TAASGTPTPPARSQADKP---VLAIRVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 134
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 135 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 167
>gi|290543326|ref|NP_001166512.1| Y box binding protein 1 [Cavia porcellus]
gi|194241598|gb|ACF35054.1| YB1 [Cavia porcellus]
Length = 324
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD 141
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 114 VEGEKGAEAANVT 126
>gi|203398|gb|AAA40906.1| putative [Rattus norvegicus]
Length = 322
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|45383329|ref|NP_989745.1| nuclease-sensitive element-binding protein 1 [Gallus gallus]
gi|516701|dbj|BAA05380.1| unnamed protein product [Gallus gallus]
Length = 326
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|392344611|ref|XP_003749029.1| PREDICTED: nuclease-sensitive element-binding protein 1-like
[Rattus norvegicus]
Length = 322
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|387017366|gb|AFJ50801.1| Nuclease-sensitive element-binding protein 1 [Crotalus adamanteus]
Length = 353
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 77 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 136
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 137 VEGEKGAEAANVTGPGGVPVQGSKYAAD 164
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 77 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 136
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 137 VEGEKGAEAANV 148
>gi|73909033|gb|AAI03638.1| Ybx1 protein [Rattus norvegicus]
Length = 326
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|9653686|gb|AAB46889.2| TSH receptor suppressor element-binding protein-1 [Rattus sp.]
Length = 322
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|194131842|gb|ACF33226.1| Y-box protein Lyb1 [Lethenteron camtschaticum]
Length = 331
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%), Gaps = 3/113 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
++A A P P KK ++ATKV G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 2 SEAAAQPEKPRPAVPEKK---IIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 58
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKY 120
NNPRK +++ +GE VEFD+++G+KG EA NVTGP G VQGS++AA++ ++
Sbjct: 59 KNNPRKYLRSVGDGEVVEFDVVEGEKGAEAANVTGPGGTAVQGSRYAADRRRF 111
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
++A A P P + KK ++ATKV G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 2 SEAAAQPEKPRPAVPEKK---IIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 58
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNPRK +++ +GE VEFD+++G+KG + V
Sbjct: 59 KNNPRKYLRSVGDGEVVEFDVVEGEKGAEAANV 91
>gi|29477111|gb|AAH50156.1| Y box binding protein 1 [Danio rerio]
Length = 309
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVPVQGSKYAAD 121
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|449487182|ref|XP_002194901.2| PREDICTED: nuclease-sensitive element-binding protein 1 isoform 1
[Taeniopygia guttata]
Length = 320
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAAD 138
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 111 VEGEKGAEAANVT 123
>gi|465508|sp|Q06066.1|YBOX1_CHICK RecName: Full=Nuclease-sensitive element-binding protein 1;
AltName: Full=Y-box transcription factor; AltName:
Full=Y-box-binding protein 1; Short=YB-1
gi|289797|gb|AAA02573.1| YB-1 protein [Gallus gallus]
Length = 321
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAAD 138
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 111 VEGEKGAEAANVT 123
>gi|197245601|gb|AAI68507.1| Ybx1 protein [Danio rerio]
Length = 310
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVPVQGSKYAAD 121
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|157278086|ref|NP_001098143.1| Y-box binding protein [Oryzias latipes]
gi|27348122|dbj|BAC45236.1| Y-box binding protein [Oryzias latipes]
Length = 306
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 70/89 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 36 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 95
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G+KG EA NVTGP G VQGS++AA++
Sbjct: 96 VEGEKGAEAANVTGPGGVAVQGSKYAADR 124
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 36 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 95
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 96 VEGEKGAEAANVT 108
>gi|2745892|gb|AAB94768.1| Y box transcription factor [Mus musculus]
Length = 299
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 29 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 88
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 89 VEGEKGAEAANVTGPGGVPVQGSKYAAD 116
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 29 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 88
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 89 VEGEKGAEAANVT 101
>gi|457262|gb|AAA36569.1| nuclease sensitive element binding protein-1 [Homo sapiens]
Length = 322
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 113 VEGEKGAEAANVTGPGGVPVQGSKYAAD 140
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 113 VEGEKGAEAANV 124
>gi|116283293|gb|AAH18393.1| YBX1 protein [Homo sapiens]
Length = 267
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD 141
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 114 VEGEKGAEAANV 125
>gi|33875177|gb|AAH00064.1| YBX1 protein, partial [Homo sapiens]
gi|47939143|gb|AAH72014.1| YBX1 protein, partial [Homo sapiens]
Length = 266
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD 141
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 114 VEGEKGAEAANV 125
>gi|1353778|gb|AAB01787.1| Y-Box binding protein [Columba livia]
Length = 287
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 17 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 76
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 77 VEGEKGAEAANVTGPGGVPVQGSKYAAD 104
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 17 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 76
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 77 VEGEKGAEAANVT 89
>gi|189299|gb|AAA59949.1| DNA-binding protein [Homo sapiens]
Length = 320
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 72/93 (77%)
Query: 24 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 83
+++ V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GET
Sbjct: 46 RRDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET 105
Query: 84 VEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
VEFD+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 106 VEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 138
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 57/77 (74%)
Query: 191 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 250
+++ V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GET
Sbjct: 46 RRDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET 105
Query: 251 VEFDIMQGDKGNQFCFV 267
VEFD+++G+KG + V
Sbjct: 106 VEFDVVEGEKGAEAANV 122
>gi|18859137|ref|NP_571695.1| nuclease-sensitive element-binding protein 1 isoform 2 [Danio
rerio]
gi|3695368|gb|AAC62774.1| zfY1 [Danio rerio]
gi|169642049|gb|AAI60650.1| Y box binding protein 1 [Danio rerio]
Length = 310
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVPVQGSKYAAD 121
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|187607756|ref|NP_001119929.1| nuclease-sensitive element-binding protein 1 isoform 1 [Danio
rerio]
gi|118763928|gb|AAI28886.1| Y box binding protein 1 [Danio rerio]
Length = 309
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVPVQGSKYAAD 121
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|397477911|ref|XP_003810307.1| PREDICTED: Y-box-binding protein 2, partial [Pan paniscus]
Length = 302
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 78/118 (66%), Gaps = 8/118 (6%)
Query: 13 TPSNPSANESPKKEPV--------VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 64
TP NP+ S P+ VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 3 TPGNPATAASGTPAPLARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 62
Query: 65 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N+ K R
Sbjct: 63 AIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRKSRR 120
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 8/96 (8%)
Query: 180 TPSNPSASESPKKEPV--------VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 231
TP NP+ + S P+ VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 3 TPGNPATAASGTPAPLARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 62
Query: 232 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 63 AIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNV 98
>gi|374533674|gb|AEZ53750.1| cold shock domain protein A, partial [Scaphiopus holbrookii]
Length = 236
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 77/110 (70%), Gaps = 5/110 (4%)
Query: 7 GTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI 66
GT A P P + E+ +K VLATKV G VKWF+V++GYGFI + EDVFVH I
Sbjct: 9 GTDQNAAP--PVSGETERK---VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI 63
Query: 67 KYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
K NNPRK +++ +GE VEFD++ G+KG EA NVTGP G VQGS++AA+
Sbjct: 64 KKNNPRKYLRSVGDGEVVEFDVVAGEKGAEAANVTGPKGAPVQGSRYAAD 113
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 62/94 (65%), Gaps = 5/94 (5%)
Query: 174 GTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI 233
GT A P P + E+ +K VLATKV G VKWF+V++GYGFI + EDVFVH I
Sbjct: 9 GTDQNAAP--PVSGETERK---VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI 63
Query: 234 KYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
K NNPRK +++ +GE VEFD++ G+KG + V
Sbjct: 64 KKNNPRKYLRSVGDGEVVEFDVVAGEKGAEAANV 97
>gi|988283|gb|AAA75476.1| mYB-1b [Mus musculus]
Length = 322
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|395853103|ref|XP_003804011.1| PREDICTED: LOW QUALITY PROTEIN: nuclease-sensitive element-binding
protein 1 [Otolemur garnettii]
Length = 342
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 146 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 205
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 206 VEGEKGAEAANVTGPGGIPVQGSKYAAD 233
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 146 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 205
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 206 VEGEKGAEAANV 217
>gi|332025391|gb|EGI65558.1| Y-box factor-like protein [Acromyrmex echinatior]
Length = 362
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 21 ESPK--KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 78
E PK ++ +V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++
Sbjct: 9 EQPKAVQQKMVIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSV 68
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR-------RKAKANKRK 131
+GE VEFD++ G+KGHEA NVTGP G V+GS +AA+K + R R+ +
Sbjct: 69 GDGEVVEFDVVIGEKGHEAANVTGPAGEAVKGSPYAADKRRGYRGIHWVYPRRGNGRPQN 128
Query: 132 RKSRRNNRLF 141
R+SR +
Sbjct: 129 RRSREGQEGY 138
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 188 ESPK--KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 245
E PK ++ +V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++
Sbjct: 9 EQPKAVQQKMVIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSV 68
Query: 246 AEGETVEFDIMQGDKGNQFCFVL 268
+GE VEFD++ G+KG++ V
Sbjct: 69 GDGEVVEFDVVIGEKGHEAANVT 91
>gi|312377865|gb|EFR24595.1| hypothetical protein AND_10704 [Anopheles darlingi]
Length = 428
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P+KE ++ATKV GVVKWF+VKSGYGFI ++EDVFVH I NNP+K +++ +GE
Sbjct: 82 PQKE--IIATKVTGVVKWFNVKSGYGFINRGDTHEDVFVHQSAIARNNPKKAVRSVGDGE 139
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
VEFD++ G+KG+EA NVTGP G V+GSQ+AA K
Sbjct: 140 EVEFDVVIGEKGNEAANVTGPSGEAVKGSQYAAEK 174
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P+KE ++ATKV GVVKWF+VKSGYGFI ++EDVFVH I NNP+K +++ +GE
Sbjct: 82 PQKE--IIATKVTGVVKWFNVKSGYGFINRGDTHEDVFVHQSAIARNNPKKAVRSVGDGE 139
Query: 250 TVEFDIMQGDKGNQFCFVL 268
VEFD++ G+KGN+ V
Sbjct: 140 EVEFDVVIGEKGNEAANVT 158
>gi|2073109|dbj|BAA19849.1| Y box protein 1 [Carassius auratus]
Length = 311
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 35 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 94
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 95 VEGEKGAEAANVTGPGGVPVQGSKYAAD 122
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 35 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 94
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 95 VEGEKGAEAANV 106
>gi|380799971|gb|AFE71861.1| nuclease-sensitive element-binding protein 1, partial [Macaca
mulatta]
Length = 288
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 18 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 77
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 78 VEGEKGAEAANVTGPGGVPVQGSKYAAD 105
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 18 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 77
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 78 VEGEKGAEAANVT 90
>gi|301791962|ref|XP_002930949.1| PREDICTED: nuclease-sensitive element-binding protein 1-like,
partial [Ailuropoda melanoleuca]
Length = 416
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 75/100 (75%), Gaps = 3/100 (3%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
PKK V+A +V G VKWF+VK+GYGFI+ + EDVFVH + I NNP K +++ +GE
Sbjct: 61 PKK---VIAKRVRGSVKWFNVKNGYGFISRHDTQEDVFVHQRAITRNNPHKYQRSVGDGE 117
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
TVEFD++QG++G EA NVTGP G VQGS++AA+ P++ R
Sbjct: 118 TVEFDVVQGERGTEAANVTGPAGAPVQGSRYAASWPRFYR 157
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
PKK V+A +V G VKWF+VK+GYGFI+ + EDVFVH + I NNP K +++ +GE
Sbjct: 61 PKK---VIAKRVRGSVKWFNVKNGYGFISRHDTQEDVFVHQRAITRNNPHKYQRSVGDGE 117
Query: 250 TVEFDIMQGDKGNQFCFV 267
TVEFD++QG++G + V
Sbjct: 118 TVEFDVVQGERGTEAANV 135
>gi|213510928|ref|NP_001133543.1| Y-box-binding protein 2-A [Salmo salar]
gi|209154422|gb|ACI33443.1| Y-box-binding protein 2-A [Salmo salar]
Length = 328
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Query: 8 TKAEATPSNPSA--NESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKR 65
T AEA + PSA E P+ E ++AT V G VKWF+V++GYGFI + EDVFVH
Sbjct: 2 TDAEAQSAPPSAPVEEQPQPERKIIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTA 61
Query: 66 IKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
IK NNPRK +++ +GE VEFD+++ KG EA NVTGP G V+GS++A NK
Sbjct: 62 IKKNNPRKFLRSVGDGEVVEFDVVEAAKGSEAANVTGPGGVPVKGSRYAPNK 113
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 175 TKAEATPSNPSA--SESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKR 232
T AEA + PSA E P+ E ++AT V G VKWF+V++GYGFI + EDVFVH
Sbjct: 2 TDAEAQSAPPSAPVEEQPQPERKIIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTA 61
Query: 233 IKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
IK NNPRK +++ +GE VEFD+++ KG++ V
Sbjct: 62 IKKNNPRKFLRSVGDGEVVEFDVVEAAKGSEAANVT 97
>gi|392883116|gb|AFM90390.1| nuclease-sensitive element-binding protein 1-like protein
[Callorhinchus milii]
Length = 334
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 106
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 107 VEGEKGAEAANVTGPGGVPVQGSRYAAD 134
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 106
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 107 VEGEKGAEAANVT 119
>gi|387914394|gb|AFK10806.1| nuclease-sensitive element-binding protein 1-like protein
[Callorhinchus milii]
Length = 334
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 106
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 107 VEGEKGAEAANVTGPGGVPVQGSRYAAD 134
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 106
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 107 VEGEKGAEAANVT 119
>gi|111182511|gb|ABH07676.1| cold-shock domain protein [Scophthalmus maximus]
Length = 297
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVAVQGSKYAAD 121
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|379067732|gb|AFC90219.1| cold shock domain protein [Azumapecten farreri]
Length = 308
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE VEFD+
Sbjct: 28 VIATKVTGTVKWFNVKSGYGFINRDDTKEDVFVHQTAITKNNPRKYLRSVGDGEKVEFDV 87
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG+EA NVTGP+G VQGS++AA+
Sbjct: 88 VEGEKGNEASNVTGPEGNPVQGSKYAAD 115
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE VEFD+
Sbjct: 28 VIATKVTGTVKWFNVKSGYGFINRDDTKEDVFVHQTAITKNNPRKYLRSVGDGEKVEFDV 87
Query: 256 MQGDKGNQFCFV 267
++G+KGN+ V
Sbjct: 88 VEGEKGNEASNV 99
>gi|47220428|emb|CAG03208.1| unnamed protein product [Tetraodon nigroviridis]
Length = 298
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVAVQGSKYAAD 121
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|410899412|ref|XP_003963191.1| PREDICTED: nuclease-sensitive element-binding protein 1 isoform 2
[Takifugu rubripes]
Length = 319
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVAVQGSKYAAD 121
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|410899414|ref|XP_003963192.1| PREDICTED: nuclease-sensitive element-binding protein 1 isoform 3
[Takifugu rubripes]
Length = 292
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVAVQGSKYAAD 121
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|392876672|gb|AFM87168.1| nuclease-sensitive element-binding protein 1-like protein
[Callorhinchus milii]
Length = 334
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 106
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 107 VEGEKGAEAANVTGPGGVPVQGSRYAAD 134
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 106
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 107 VEGEKGAEAANVT 119
>gi|410899410|ref|XP_003963190.1| PREDICTED: nuclease-sensitive element-binding protein 1 isoform 1
[Takifugu rubripes]
Length = 298
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVAVQGSKYAAD 121
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|385724704|gb|AFI74356.1| cold shock Y-box protein [Cherax quadricarinatus]
Length = 324
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P KE VLATKV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +G
Sbjct: 16 APVKEKEVLATKVTGTVKWFNVKSGYGFINRHDTKEDVFVHQSAIIKNNPRKYVRSVGDG 75
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
E VEFD++ G+KG+EA NVTGP G V+GS +AA+
Sbjct: 76 EEVEFDVVVGEKGNEAANVTGPGGEAVKGSPYAAD 110
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 56/79 (70%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P KE VLATKV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +G
Sbjct: 16 APVKEKEVLATKVTGTVKWFNVKSGYGFINRHDTKEDVFVHQSAIIKNNPRKYVRSVGDG 75
Query: 249 ETVEFDIMQGDKGNQFCFV 267
E VEFD++ G+KGN+ V
Sbjct: 76 EEVEFDVVVGEKGNEAANV 94
>gi|392883992|gb|AFM90828.1| nuclease-sensitive element-binding protein 1-like protein
[Callorhinchus milii]
Length = 334
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 106
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 107 VEGEKGAEAANVTGPGGVPVQGSRYAAD 134
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 106
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 107 VEGEKGAEAANVT 119
>gi|51105064|gb|AAT97092.1| Y-box factor-like protein [Lymnaea stagnalis]
Length = 219
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 77/114 (67%)
Query: 3 MCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 62
M D+ + E + +KE ++A V G VKWF+VKSGYGFI + EDVFVH
Sbjct: 1 MADTENQNEVENKPAPEQKVEQKEKKLIAGHVTGTVKWFNVKSGYGFINRDDTKEDVFVH 60
Query: 63 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
I NNPRK +++ +GE VEFD+++G+KG+EA NVTGPDG +VQGS++AA+
Sbjct: 61 QTAIIKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPDGSNVQGSKYAAD 114
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%)
Query: 170 MCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 229
M D+ + E + +KE ++A V G VKWF+VKSGYGFI + EDVFVH
Sbjct: 1 MADTENQNEVENKPAPEQKVEQKEKKLIAGHVTGTVKWFNVKSGYGFINRDDTKEDVFVH 60
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
I NNPRK +++ +GE VEFD+++G+KGN+ V
Sbjct: 61 QTAIIKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANV 98
>gi|157118310|ref|XP_001653164.1| Y-box binding protein [Aedes aegypti]
gi|108883287|gb|EAT47512.1| AAEL001375-PA [Aedes aegypti]
Length = 304
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 6/118 (5%)
Query: 19 ANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 78
A++ +KE V+ATKV GVVKWF+VKSGYGFI + EDVFVH I NNP+K +++
Sbjct: 2 ADQQAQKE--VIATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSV 59
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRR 136
+GE VEFD++ G+KG+EA NVTGP G V+GS +AA K RR + +KR RR
Sbjct: 60 GDGEVVEFDVVIGEKGNEAANVTGPQGEPVKGSPYAAEK----RRGYRQWWQKRGQRR 113
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 186 ASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 245
A + +KE V+ATKV GVVKWF+VKSGYGFI + EDVFVH I NNP+K +++
Sbjct: 2 ADQQAQKE--VIATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSV 59
Query: 246 AEGETVEFDIMQGDKGNQFCFV 267
+GE VEFD++ G+KGN+ V
Sbjct: 60 GDGEVVEFDVVIGEKGNEAANV 81
>gi|288558834|sp|P45441.2|YBX2B_XENLA RecName: Full=Y-box-binding protein 2-B; AltName: Full=Cytoplasmic
RNA-binding protein p54; AltName: Full=Frog Y-box
protein 2-B; Short=FRGY2b; AltName: Full=Messenger
ribonucleoprotein particle 3; Short=mRNP3
gi|161611735|gb|AAI55914.1| Csda-A protein [Xenopus laevis]
Length = 324
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+LAT+V G VKWF+V++GYGFI S EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 LLATQVQGTVKWFNVRNGYGFINRNDSKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 96
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G V+GS+FA N
Sbjct: 97 VEGEKGAEAANVTGPGGVPVKGSRFAPN 124
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+LAT+V G VKWF+V++GYGFI S EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 LLATQVQGTVKWFNVRNGYGFINRNDSKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 96
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 97 VEGEKGAEAANVT 109
>gi|332812662|ref|XP_001136258.2| PREDICTED: nuclease-sensitive element-binding protein 1-like [Pan
troglodytes]
Length = 325
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+A KV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 55 VIARKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 114
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKY 120
++G+KG EA NVTGP G VQGS++AA++ Y
Sbjct: 115 VEGEKGAEAANVTGPGGVPVQGSKYAADRNHY 146
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+A KV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 55 VIARKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 114
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 115 VEGEKGAEAANVT 127
>gi|2739396|gb|AAB94634.1| Y-box protein [Drosophila melanogaster]
Length = 359
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 3/109 (2%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 54 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAI-ANNPKKAVRSVGDGE 110
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRK 131
VEFD++ G+KG+EA NVTGP G V+GSQFAA+K + R K N+RK
Sbjct: 111 VVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRK 159
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P KE V+ATKV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE
Sbjct: 54 PTKE--VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAI-ANNPKKAVRSVGDGE 110
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++ G+KGN+ V
Sbjct: 111 VVEFDVVIGEKGNEAANV 128
>gi|72008824|ref|XP_785816.1| PREDICTED: uncharacterized protein LOC580680 [Strongylocentrotus
purpuratus]
Length = 326
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Query: 10 AEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYN 69
+E P E+P+K +VLATKV G VKWF+VK+GYGFI + EDVFVH I N
Sbjct: 2 SEGQEEQPQTIEAPEK--IVLATKVSGTVKWFNVKNGYGFINRDDTKEDVFVHQSAIVRN 59
Query: 70 NPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
NPRK +++ +GE VEFD+++G KG+EA VTGP+G V GS++AA+K
Sbjct: 60 NPRKYQRSVGDGEVVEFDVVEGTKGNEAARVTGPEGAPVVGSKYAADK 107
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 177 AEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYN 236
+E P E+P+K +VLATKV G VKWF+VK+GYGFI + EDVFVH I N
Sbjct: 2 SEGQEEQPQTIEAPEK--IVLATKVSGTVKWFNVKNGYGFINRDDTKEDVFVHQSAIVRN 59
Query: 237 NPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NPRK +++ +GE VEFD+++G KGN+ V
Sbjct: 60 NPRKYQRSVGDGEVVEFDVVEGTKGNEAARVT 91
>gi|345798009|ref|XP_003434389.1| PREDICTED: LOW QUALITY PROTEIN: nuclease-sensitive element-binding
protein 1 [Canis lupus familiaris]
Length = 444
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGF+ + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 174 VIATKVLGTVKWFNVRNGYGFLNRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 233
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 234 VEGEKGAEAANVTGPGGVPVQGSKYAAD 261
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGF+ + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 174 VIATKVLGTVKWFNVRNGYGFLNRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 233
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 234 VEGEKGAEAANV 245
>gi|354549569|gb|AER27829.1| Y box binding protein 1 [Sus scrofa]
Length = 220
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 6 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 65
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 66 VEGEKGAEAANVTGPGGVPVQGSKYAAD 93
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 6 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 65
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 66 VEGEKGAEAANV 77
>gi|281344168|gb|EFB19752.1| hypothetical protein PANDA_021601 [Ailuropoda melanoleuca]
Length = 310
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 75/100 (75%), Gaps = 3/100 (3%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
PKK V+A +V G VKWF+VK+GYGFI+ + EDVFVH + I NNP K +++ +GE
Sbjct: 28 PKK---VIAKRVRGSVKWFNVKNGYGFISRHDTQEDVFVHQRAITRNNPHKYQRSVGDGE 84
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
TVEFD++QG++G EA NVTGP G VQGS++AA+ P++ R
Sbjct: 85 TVEFDVVQGERGTEAANVTGPAGAPVQGSRYAASWPRFYR 124
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
PKK V+A +V G VKWF+VK+GYGFI+ + EDVFVH + I NNP K +++ +GE
Sbjct: 28 PKK---VIAKRVRGSVKWFNVKNGYGFISRHDTQEDVFVHQRAITRNNPHKYQRSVGDGE 84
Query: 250 TVEFDIMQGDKGNQFCFV 267
TVEFD++QG++G + V
Sbjct: 85 TVEFDVVQGERGTEAANV 102
>gi|410048463|ref|XP_001134851.3| PREDICTED: nuclease-sensitive element-binding protein 1-like [Pan
troglodytes]
Length = 384
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 70/89 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 115 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 174
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G+KG +A NVTGP G VQGS++AA++
Sbjct: 175 VEGEKGAKAANVTGPGGVAVQGSKYAADR 203
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 115 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 174
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 175 VEGEKGAKAANVT 187
>gi|110763831|ref|XP_393344.3| PREDICTED: hypothetical protein LOC409854 [Apis mellifera]
Length = 279
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
Query: 11 EATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 70
E P P A + + +++A KV G VKWF+VKSGYGFI + EDVFVH I NN
Sbjct: 5 EKQPEQPKAGQ----QKLIIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNN 60
Query: 71 PRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
PRK +++ +GE VEFD++ G+KGHEA NVTGP G V+GS +AA+K
Sbjct: 61 PRKAVRSVGDGEVVEFDVVIGEKGHEAANVTGPSGEAVKGSPYAADK 107
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 178 EATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 237
E P P A + + +++A KV G VKWF+VKSGYGFI + EDVFVH I NN
Sbjct: 5 EKQPEQPKAGQ----QKLIIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNN 60
Query: 238 PRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
PRK +++ +GE VEFD++ G+KG++ V
Sbjct: 61 PRKAVRSVGDGEVVEFDVVIGEKGHEAANVT 91
>gi|82802831|gb|ABB92461.1| rcNSEP1 [Pan troglodytes]
Length = 319
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 70/89 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 109
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G+KG +A NVTGP G VQGS++AA++
Sbjct: 110 VEGEKGAKAANVTGPGGVAVQGSKYAADR 138
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 109
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 110 VEGEKGAKAANVT 122
>gi|402898539|ref|XP_003919508.1| PREDICTED: LOW QUALITY PROTEIN: Y-box-binding protein 2 [Papio
anubis]
Length = 359
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 77/107 (71%), Gaps = 3/107 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIRVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 175
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIRVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 162
>gi|380014528|ref|XP_003691281.1| PREDICTED: nuclease-sensitive element-binding protein 1-like [Apis
florea]
Length = 277
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
Query: 11 EATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 70
E P P A + + +++A KV G VKWF+VKSGYGFI + EDVFVH I NN
Sbjct: 5 EKQPEQPKAGQ----QKLIIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNN 60
Query: 71 PRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
PRK +++ +GE VEFD++ G+KGHEA NVTGP G V+GS +AA+K
Sbjct: 61 PRKAVRSVGDGEVVEFDVVIGEKGHEAANVTGPSGEAVKGSPYAADK 107
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 178 EATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 237
E P P A + + +++A KV G VKWF+VKSGYGFI + EDVFVH I NN
Sbjct: 5 EKQPEQPKAGQ----QKLIIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNN 60
Query: 238 PRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
PRK +++ +GE VEFD++ G+KG++ V
Sbjct: 61 PRKAVRSVGDGEVVEFDVVIGEKGHEAANVT 91
>gi|109113073|ref|XP_001107460.1| PREDICTED: y-box-binding protein 2-like [Macaca mulatta]
Length = 359
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 77/107 (71%), Gaps = 3/107 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIRVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 175
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 72 TAASGTPAPPARSQADKP---VLAIRVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 128
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 129 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 161
>gi|383849814|ref|XP_003700531.1| PREDICTED: uncharacterized protein LOC100878915 [Megachile
rotundata]
Length = 278
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 21 ESPK--KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 78
E PK ++ +++A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++
Sbjct: 9 EQPKAVQQKLLIAKKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSV 68
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
+GE VEFD++ GDKGHEA NVTGP G V+GS +AA+K
Sbjct: 69 GDGEVVEFDVVVGDKGHEAANVTGPSGEPVKGSPYAADK 107
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 188 ESPK--KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 245
E PK ++ +++A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++
Sbjct: 9 EQPKAVQQKLLIAKKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSV 68
Query: 246 AEGETVEFDIMQGDKGNQFCFVL 268
+GE VEFD++ GDKG++ V
Sbjct: 69 GDGEVVEFDVVVGDKGHEAANVT 91
>gi|22901740|gb|AAN10049.1| Y-box protein Ct-p40 [Chironomus tentans]
Length = 264
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 7/132 (5%)
Query: 3 MCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 62
M D T+A A + P +P + ++ATKV G VKWF+VKSGYGFI + +D+FVH
Sbjct: 1 MTD--TEAPAVEAQPQKTAAPPVQKEIIATKVTGTVKWFNVKSGYGFINRNDNKQDIFVH 58
Query: 63 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPK--- 119
I NNP+K +++ +GE VEFD++ G+KG EA NVTGP+G V+GS +AA+K +
Sbjct: 59 QSAIIKNNPKKAVRSVGDGEVVEFDVVAGEKGSEAANVTGPEGEPVKGSPYAADKRRGRY 118
Query: 120 --YNRRKAKANK 129
NRR+ + K
Sbjct: 119 WSRNRRRTSSTK 130
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 170 MCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 229
M D T+A A + P + +P + ++ATKV G VKWF+VKSGYGFI + +D+FVH
Sbjct: 1 MTD--TEAPAVEAQPQKTAAPPVQKEIIATKVTGTVKWFNVKSGYGFINRNDNKQDIFVH 58
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
I NNP+K +++ +GE VEFD++ G+KG++ V
Sbjct: 59 QSAIIKNNPKKAVRSVGDGEVVEFDVVAGEKGSEAANVT 97
>gi|405950240|gb|EKC18239.1| Y-box factor-like protein, partial [Crassostrea gigas]
Length = 251
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 68/87 (78%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
LA K+ G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE VEFD++
Sbjct: 2 LANKITGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIIKNNPKKYLRSVGDGEAVEFDVV 61
Query: 90 QGDKGHEAINVTGPDGRHVQGSQFAAN 116
+G+KG+EA NVTGP+G HVQGS++AA+
Sbjct: 62 EGEKGNEAANVTGPEGAHVQGSKYAAD 88
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
LA K+ G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE VEFD++
Sbjct: 2 LANKITGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIIKNNPKKYLRSVGDGEAVEFDVV 61
Query: 257 QGDKGNQFCFV 267
+G+KGN+ V
Sbjct: 62 EGEKGNEAANV 72
>gi|197632617|gb|ACH71032.1| Y-box binding protein-1 [Salmo salar]
gi|209732334|gb|ACI67036.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
gi|221222302|gb|ACM09812.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
gi|223646798|gb|ACN10157.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
gi|223649012|gb|ACN11264.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
gi|223672655|gb|ACN12509.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
gi|303663491|gb|ADM16105.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
Length = 300
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Query: 1 MQMCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVF 60
Q + +E+ PS P+ + K+ V+ATKV G VKWF+V++GYGFI + EDVF
Sbjct: 8 QQPPEPAVDSESPPSPPATASAGDKK--VIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 65
Query: 61 VHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
VH IK NNP+K +++ +GETVEFD+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 66 VHQTAIKKNNPKKYLRSVGDGETVEFDVVEGEKGAEAANVTGPAGVPVQGSKYAAD 121
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Query: 177 AEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYN 236
+E+ PS P+ + + K+ V+ATKV G VKWF+V++GYGFI + EDVFVH IK N
Sbjct: 17 SESPPSPPATASAGDKK--VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKN 74
Query: 237 NPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NP+K +++ +GETVEFD+++G+KG + V
Sbjct: 75 NPKKYLRSVGDGETVEFDVVEGEKGAEAANVT 106
>gi|432103373|gb|ELK30487.1| DNA-binding protein A, partial [Myotis davidii]
Length = 285
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+ ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 ISATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 60
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 61 VEGEKGAEAANVTGPDGVPVEGSRYAAD 88
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+ ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 ISATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 60
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 61 VEGEKGAEAANV 72
>gi|374533672|gb|AEZ53749.1| cold shock domain protein A, partial [Scaphiopus couchii]
Length = 241
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+
Sbjct: 32 VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDV 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+ G+KG EA NVTGP G VQGS++AA+
Sbjct: 92 VAGEKGAEAANVTGPKGAPVQGSRYAAD 119
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+
Sbjct: 32 VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDV 91
Query: 256 MQGDKGNQFCFV 267
+ G+KG + V
Sbjct: 92 VAGEKGAEAANV 103
>gi|374533670|gb|AEZ53748.1| cold shock domain protein A, partial [Spea multiplicata]
Length = 240
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+
Sbjct: 32 VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDV 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+ G+KG EA NVTGP G VQGS++AA+
Sbjct: 92 VAGEKGAEAANVTGPKGAPVQGSRYAAD 119
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 174 GTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI 233
GT P P +E VLATKV G VKWF+V++GYGFI + EDVFVH I
Sbjct: 15 GTDQNTAPPVPGETER-----KVLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI 69
Query: 234 KYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
K NNPRK +++ +GE VEFD++ G+KG + V
Sbjct: 70 KKNNPRKYLRSVGDGEVVEFDVVAGEKGAEAANV 103
>gi|374533668|gb|AEZ53747.1| cold shock domain protein A, partial [Spea bombifrons]
Length = 245
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+
Sbjct: 32 VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDV 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+ G+KG EA NVTGP G VQGS++AA+
Sbjct: 92 VAGEKGAEAANVTGPKGAPVQGSRYAAD 119
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 174 GTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI 233
GT P P +E VLATKV G VKWF+V++GYGFI + EDVFVH I
Sbjct: 15 GTDQNTAPPVPGETER-----KVLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI 69
Query: 234 KYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
K NNPRK +++ +GE VEFD++ G+KG + V
Sbjct: 70 KKNNPRKYLRSVGDGEVVEFDVVAGEKGAEAANV 103
>gi|30089118|emb|CAD27800.1| Y1 protein [Dugesia etrusca]
Length = 280
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 70/94 (74%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
LATK+ G VKWF+VKSGYGFI + ED+FVH I NNPRK +++ +GE VEFD++
Sbjct: 26 LATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVV 85
Query: 90 QGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
+G+KG EA NVTGPDG VQGS++AA+K Y R
Sbjct: 86 EGEKGLEAANVTGPDGIPVQGSKYAADKRHYRSR 119
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
LATK+ G VKWF+VKSGYGFI + ED+FVH I NNPRK +++ +GE VEFD++
Sbjct: 26 LATKINGKVKWFNVKSGYGFINRNDNQEDIFVHQTAILKNNPRKWQRSVGDGEEVEFDVV 85
Query: 257 QGDKG 261
+G+KG
Sbjct: 86 EGEKG 90
>gi|22901742|gb|AAN10050.1| Y-box protein Ct-p50 [Chironomus tentans]
Length = 317
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 7/132 (5%)
Query: 3 MCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 62
M D T+A A + P +P + ++ATKV G VKWF+VKSGYGFI + +D+FVH
Sbjct: 1 MTD--TEAPAVEAQPQKTAAPPVQKEIIATKVTGTVKWFNVKSGYGFINRNDNKQDIFVH 58
Query: 63 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPK--- 119
I NNP+K +++ +GE VEFD++ G+KG EA NVTGP+G V+GS +AA+K +
Sbjct: 59 QSAIIKNNPKKAVRSVGDGEVVEFDVVAGEKGSEAANVTGPEGEPVKGSPYAADKRRGRY 118
Query: 120 --YNRRKAKANK 129
NRR+ + K
Sbjct: 119 WSRNRRRTSSTK 130
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 170 MCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 229
M D T+A A + P + +P + ++ATKV G VKWF+VKSGYGFI + +D+FVH
Sbjct: 1 MTD--TEAPAVEAQPQKTAAPPVQKEIIATKVTGTVKWFNVKSGYGFINRNDNKQDIFVH 58
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
I NNP+K +++ +GE VEFD++ G+KG++ V
Sbjct: 59 QSAIIKNNPKKAVRSVGDGEVVEFDVVAGEKGSEAANVT 97
>gi|62751871|ref|NP_001015855.1| cold shock domain protein A [Xenopus (Silurana) tropicalis]
gi|59861901|gb|AAH90361.1| cold shock domain protein A [Xenopus (Silurana) tropicalis]
Length = 248
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+
Sbjct: 31 VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDV 90
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+ G+KG EA NVTGP G VQGS++AA+
Sbjct: 91 VAGEKGAEAANVTGPKGAPVQGSRYAAD 118
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+
Sbjct: 31 VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDV 90
Query: 256 MQGDKGNQFCFV 267
+ G+KG + V
Sbjct: 91 VAGEKGAEAANV 102
>gi|61217666|sp|Q9Z2C8.1|YBOX2_MOUSE RecName: Full=Y-box-binding protein 2; AltName: Full=FRGY2 homolog;
AltName: Full=Germ cell-specific Y-box-binding protein
gi|4071321|gb|AAC98673.1| Y-box protein MSY2 [Mus musculus]
Length = 360
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 77/109 (70%), Gaps = 3/109 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 73 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 129
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
NNPRK +++ +GETVEFD+++G+KG A NVTGP G V+GS++A N
Sbjct: 130 RNNPRKFLRSVGDGETVEFDVVEGEKGARAANVTGPGGVPVKGSRYAPN 178
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 73 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 129
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 130 RNNPRKFLRSVGDGETVEFDVVEGEKGARAANV 162
>gi|443724770|gb|ELU12623.1| hypothetical protein CAPTEDRAFT_166603 [Capitella teleta]
Length = 371
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 72/92 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+A+KV G VKWF+VK+GYGFI + EDVFVH I NNPRK +++ +GE VEFD+
Sbjct: 19 VIASKVTGTVKWFNVKNGYGFINRDDTQEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDV 78
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKY 120
++G+KG+EA NVTGP+G VQGS++AA++ ++
Sbjct: 79 VEGEKGNEAANVTGPEGEPVQGSKYAADRRRF 110
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+A+KV G VKWF+VK+GYGFI + EDVFVH I NNPRK +++ +GE VEFD+
Sbjct: 19 VIASKVTGTVKWFNVKNGYGFINRDDTQEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDV 78
Query: 256 MQGDKGNQFCFVL 268
++G+KGN+ V
Sbjct: 79 VEGEKGNEAANVT 91
>gi|26344984|dbj|BAC36141.1| unnamed protein product [Mus musculus]
Length = 361
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
Query: 15 SNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 74
S P+ E +K+ VLATKV G VKWF+V++GYGFI + ED FVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDAFVHQTVIKKNNPRKY 123
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++ +GETVEFD+ +G+KG EA NVTGPDG V+GS +AA+
Sbjct: 124 LRSVGDGETVEFDVGEGEKGAEAANVTGPDGVPVEGSCYAAD 165
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 182 SNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
S P+ E +K+ VLATKV G VKWF+V++GYGFI + ED FVH IK NNPRK
Sbjct: 66 SAPAGGEDAEKK--VLATKVLGTVKWFNVRNGYGFINRNDTKEDAFVHQTVIKKNNPRKY 123
Query: 242 YKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+ +G+KG + V
Sbjct: 124 LRSVGDGETVEFDVGEGEKGAEAANV 149
>gi|14270385|emb|CAC39432.1| cold-shock domain protein [Takifugu rubripes]
Length = 263
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 17 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 76
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 77 VEGEKGAEAANVTGPGGVAVQGSKYAAD 104
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 17 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 76
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 77 VEGEKGAEAANVT 89
>gi|340723184|ref|XP_003399975.1| PREDICTED: hypothetical protein LOC100647589 [Bombus terrestris]
Length = 279
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
Query: 11 EATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 70
E P P A + + +++A KV G VKWF+VKSGYGFI + EDVFVH I NN
Sbjct: 5 EKQPEQPKAGQ----QKLIIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNN 60
Query: 71 PRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
PRK +++ +GE VEFD++ G+KGHEA NVTGP G V+GS +AA++
Sbjct: 61 PRKAVRSVGDGEVVEFDVVIGEKGHEAANVTGPSGEAVKGSPYAADR 107
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 178 EATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 237
E P P A + + +++A KV G VKWF+VKSGYGFI + EDVFVH I NN
Sbjct: 5 EKQPEQPKAGQ----QKLIIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNN 60
Query: 238 PRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
PRK +++ +GE VEFD++ G+KG++ V
Sbjct: 61 PRKAVRSVGDGEVVEFDVVIGEKGHEAANVT 91
>gi|149035443|gb|EDL90124.1| rCG50488, isoform CRA_a [Rattus norvegicus]
Length = 305
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
L TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 35 ALTTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 94
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 95 VEGEKGAEAANVTGPGGVPVQGSKYAAD 122
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
L TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 35 ALTTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 94
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 95 VEGEKGAEAANV 106
>gi|147904000|ref|NP_001091595.1| Y-box-binding protein 2 [Bos taurus]
gi|146186879|gb|AAI40615.1| YBX2 protein [Bos taurus]
gi|296476769|tpg|DAA18884.1| TPA: Y box binding protein 2 [Bos taurus]
Length = 360
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 75/112 (66%), Gaps = 8/112 (7%)
Query: 13 TPSNPSANESPKKEPV--------VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 64
TP NP+ S P+ VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 67 TPGNPATAASGTPAPLARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 126
Query: 65 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 127 AIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 178
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 8/96 (8%)
Query: 180 TPSNPSASESPKKEPV--------VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 231
TP NP+ + S P+ VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 67 TPGNPATAASGTPAPLARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 126
Query: 232 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 127 AIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 162
>gi|126340161|ref|XP_001372013.1| PREDICTED: DNA-binding protein A-like [Monodelphis domestica]
Length = 320
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 68/87 (78%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
LATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD++
Sbjct: 40 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEIVEFDVV 99
Query: 90 QGDKGHEAINVTGPDGRHVQGSQFAAN 116
+G+KG EA NVTGPDG V+GS++AA+
Sbjct: 100 EGEKGAEAANVTGPDGVPVEGSRYAAD 126
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
LATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD++
Sbjct: 40 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEIVEFDVV 99
Query: 257 QGDKGNQFCFV 267
+G+KG + V
Sbjct: 100 EGEKGAEAANV 110
>gi|350418677|ref|XP_003491933.1| PREDICTED: hypothetical protein LOC100746188 [Bombus impatiens]
Length = 262
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
Query: 11 EATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 70
E P P A + + +++A KV G VKWF+VKSGYGFI + EDVFVH I NN
Sbjct: 5 EKQPEQPKAGQ----QKLIIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNN 60
Query: 71 PRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
PRK +++ +GE VEFD++ G+KGHEA NVTGP G V+GS +AA++
Sbjct: 61 PRKAVRSVGDGEVVEFDVVIGEKGHEAANVTGPSGEAVKGSPYAADR 107
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 178 EATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 237
E P P A + + +++A KV G VKWF+VKSGYGFI + EDVFVH I NN
Sbjct: 5 EKQPEQPKAGQ----QKLIIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNN 60
Query: 238 PRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
PRK +++ +GE VEFD++ G+KG++ V
Sbjct: 61 PRKAVRSVGDGEVVEFDVVIGEKGHEAANVT 91
>gi|441676845|ref|XP_003282197.2| PREDICTED: Y-box-binding protein 2 [Nomascus leucogenys]
Length = 318
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 77/107 (71%), Gaps = 3/107 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 32 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 88
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A
Sbjct: 89 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 135
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 32 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 88
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 89 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 122
>gi|391342360|ref|XP_003745488.1| PREDICTED: uncharacterized protein LOC100904956 [Metaseiulus
occidentalis]
Length = 309
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Query: 3 MCDSGTKAEATPSNPSANESPKKEPV-VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFV 61
M DS +AE + +P+++P ++A +V G VKWF+VK+GYGFI + ED+FV
Sbjct: 1 MTDSAVQAEQQGDIENKEAAPEQQPKKIIAERVRGTVKWFNVKNGYGFINRNDTKEDIFV 60
Query: 62 HSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
H I NNP+K +++ EGE VEFD++ G+KG+EA NVTGP+G VQGS +AAN
Sbjct: 61 HQTAIMKNNPQKAVRSVGEGEEVEFDVVVGEKGNEASNVTGPEGAPVQGSPYAAN 115
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 170 MCDSGTKAEATPSNPSASESPKKEPV-VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFV 228
M DS +AE + +P+++P ++A +V G VKWF+VK+GYGFI + ED+FV
Sbjct: 1 MTDSAVQAEQQGDIENKEAAPEQQPKKIIAERVRGTVKWFNVKNGYGFINRNDTKEDIFV 60
Query: 229 HSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
H I NNP+K +++ EGE VEFD++ G+KGN+ V
Sbjct: 61 HQTAIMKNNPQKAVRSVGEGEEVEFDVVVGEKGNEASNV 99
>gi|74007889|ref|XP_531701.2| PREDICTED: nuclease-sensitive element-binding protein 1-like [Canis
lupus familiaris]
Length = 399
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK N+PRK +++ +GETVEFD+
Sbjct: 129 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNHPRKYLRSVGDGETVEFDV 188
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 189 VEGEKGAEAANVTGPGGVPVQGSKYAAD 216
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK N+PRK +++ +GETVEFD+
Sbjct: 129 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNHPRKYLRSVGDGETVEFDV 188
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 189 VEGEKGAEAANV 200
>gi|307209281|gb|EFN86372.1| Y-box factor-like protein [Harpegnathos saltator]
Length = 278
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 21 ESPK--KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 78
E PK ++ +V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++
Sbjct: 9 EQPKAVQQKMVIANKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIIKNNPRKAVRSV 68
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
+GE VEFD++ G+KGHEA NVTGP G V+GS +AA+K
Sbjct: 69 GDGEVVEFDVVIGEKGHEAANVTGPAGEAVKGSPYAADK 107
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 188 ESPK--KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 245
E PK ++ +V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++
Sbjct: 9 EQPKAVQQKMVIANKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIIKNNPRKAVRSV 68
Query: 246 AEGETVEFDIMQGDKGNQFCFVL 268
+GE VEFD++ G+KG++ V
Sbjct: 69 GDGEVVEFDVVIGEKGHEAANVT 91
>gi|410963934|ref|XP_003988513.1| PREDICTED: DNA-binding protein A [Felis catus]
Length = 315
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 68/86 (79%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 33 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 92
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGPDG V+GS++AA+
Sbjct: 93 GEKGAEAANVTGPDGVPVEGSRYAAD 118
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 33 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 92
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 93 GEKGAEAANV 102
>gi|397507531|ref|XP_003824248.1| PREDICTED: nuclease-sensitive element-binding protein 1-like [Pan
paniscus]
Length = 352
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 68/88 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 83 VIATKVLGTVKWFDVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 142
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG +A NVTGP G VQGS++AA+
Sbjct: 143 VEGEKGAKAANVTGPGGVPVQGSKYAAD 170
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 83 VIATKVLGTVKWFDVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 142
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 143 VEGEKGAKAANVT 155
>gi|213512942|ref|NP_001133216.1| Y-box binding protein-2 [Salmo salar]
gi|197632619|gb|ACH71033.1| Y-box binding protein-2 [Salmo salar]
Length = 301
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 75/104 (72%)
Query: 13 TPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPR 72
+PS+P+ + V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPR
Sbjct: 19 SPSSPAEAAVSAGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPR 78
Query: 73 KLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
K +++ +GE VEFD+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 79 KYLRSVGDGEIVEFDVVEGEKGAEAANVTGPAGVPVQGSKYAAD 122
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 61/89 (68%)
Query: 180 TPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPR 239
+PS+P+ + + V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPR
Sbjct: 19 SPSSPAEAAVSAGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPR 78
Query: 240 KLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
K +++ +GE VEFD+++G+KG + V
Sbjct: 79 KYLRSVGDGEIVEFDVVEGEKGAEAANVT 107
>gi|335285938|ref|XP_003131986.2| PREDICTED: Y-box-binding protein 2-like [Sus scrofa]
Length = 360
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 74/112 (66%), Gaps = 8/112 (7%)
Query: 13 TPSNPSANESPKKEPV--------VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 64
TP NP+ S P VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 67 TPGNPATAASGTSAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 126
Query: 65 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 127 AIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 178
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 8/96 (8%)
Query: 180 TPSNPSASESPKKEPV--------VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 231
TP NP+ + S P VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 67 TPGNPATAASGTSAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 126
Query: 232 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 127 AIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 162
>gi|350590843|ref|XP_003483149.1| PREDICTED: Y-box-binding protein 2-like [Sus scrofa]
Length = 394
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 74/112 (66%), Gaps = 8/112 (7%)
Query: 13 TPSNPSANESPKKEPV--------VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 64
TP NP+ S P VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 67 TPGNPATAASGTSAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 126
Query: 65 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 127 AIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 178
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 8/96 (8%)
Query: 180 TPSNPSASESPKKEPV--------VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 231
TP NP+ + S P VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 67 TPGNPATAASGTSAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 126
Query: 232 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 127 AIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 162
>gi|291390788|ref|XP_002711897.1| PREDICTED: cold shock domain protein A short-like [Oryctolagus
cuniculus]
Length = 784
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 67/101 (66%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P + ++A KV G VKWF+VK GYGFI S EDVFVH I NNPRK ++ +G
Sbjct: 558 APAGDKKIIARKVLGTVKWFNVKKGYGFIHRHDSKEDVFVHHTAITKNNPRKYLHSVGDG 617
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
ETVE D+++G KG EA NVTGP G VQGSQ+A + Y R
Sbjct: 618 ETVELDVVEGVKGAEAANVTGPGGAPVQGSQYAPERGHYGR 658
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P + ++A KV G VKWF+VK GYGFI S EDVFVH I NNPRK ++ +G
Sbjct: 558 APAGDKKIIARKVLGTVKWFNVKKGYGFIHRHDSKEDVFVHHTAITKNNPRKYLHSVGDG 617
Query: 249 ETVEFDIMQGDKGNQFCFV 267
ETVE D+++G KG + V
Sbjct: 618 ETVELDVVEGVKGAEAANV 636
>gi|351696375|gb|EHA99293.1| Nuclease-sensitive element-binding protein 1, partial
[Heterocephalus glaber]
Length = 269
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 67/86 (77%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 60
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGP G VQGS++AA+
Sbjct: 61 GEKGAEAANVTGPGGVPVQGSKYAAD 86
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 60
Query: 258 GDKGNQFCFVL 268
G+KG + V
Sbjct: 61 GEKGAEAANVT 71
>gi|242008099|ref|XP_002424850.1| Nuclease sensitive element-binding protein, putative [Pediculus
humanus corporis]
gi|212508400|gb|EEB12112.1| Nuclease sensitive element-binding protein, putative [Pediculus
humanus corporis]
Length = 288
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T E P P A + K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I
Sbjct: 2 TDPEKQPEQPKAVQQQKQ---VIANKVTGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIV 58
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPK 119
NNP+K +++ +GE VEFD++ G+KG+EA NVTGP+G V+GS +AA+K K
Sbjct: 59 KNNPKKFVRSVGDGEVVEFDVVVGEKGNEAANVTGPNGEAVKGSPYAADKRK 110
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T E P P A + K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I
Sbjct: 2 TDPEKQPEQPKAVQQQKQ---VIANKVTGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIV 58
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
NNP+K +++ +GE VEFD++ G+KGN+ V
Sbjct: 59 KNNPKKFVRSVGDGEVVEFDVVVGEKGNEAANVT 92
>gi|449487186|ref|XP_004176589.1| PREDICTED: nuclease-sensitive element-binding protein 1 isoform 2
[Taeniopygia guttata]
Length = 302
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 67/86 (77%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 31 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 90
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGP G VQGS++AA+
Sbjct: 91 GEKGAEAANVTGPGGVPVQGSKYAAD 116
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 31 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 90
Query: 258 GDKGNQFCFVL 268
G+KG + V
Sbjct: 91 GEKGAEAANVT 101
>gi|38142418|dbj|BAC99313.2| brain Y-box binding protein 1 [Rattus norvegicus]
Length = 322
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 68/88 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++ +KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEEEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 111
Query: 256 MQGDKGNQFCFVL 268
++ +KG + V
Sbjct: 112 VEEEKGAEAANVT 124
>gi|149052644|gb|EDM04461.1| rCG63497 [Rattus norvegicus]
Length = 322
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 69/88 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + + EDVFVH IK N PRK +++ +GETVEF++
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINSNDTREDVFVHQTAIKKNKPRKYLRSVGDGETVEFEV 111
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 112 VEGEKGAEAANVTGPGGVPVQGSKYAAD 139
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + + EDVFVH IK N PRK +++ +GETVEF++
Sbjct: 52 VIATKVLGTVKWFNVRNGYGFINSNDTREDVFVHQTAIKKNKPRKYLRSVGDGETVEFEV 111
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 112 VEGEKGAEAANVT 124
>gi|291394002|ref|XP_002713355.1| PREDICTED: DNA-binding protein B-like [Oryctolagus cuniculus]
Length = 320
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK ++ +GETVEFD+
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLGSVGDGETVEFDV 109
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG E NVTGP G VQGS++AA+
Sbjct: 110 VEGEKGAEVANVTGPGGVPVQGSKYAAD 137
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK ++ +GETVEFD+
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLGSVGDGETVEFDV 109
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 110 VEGEKGAEVANVT 122
>gi|345312268|ref|XP_001515006.2| PREDICTED: nuclease-sensitive element-binding protein 1-like
[Ornithorhynchus anatinus]
Length = 308
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 68/90 (75%)
Query: 27 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 86
P + TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEF
Sbjct: 36 PHLETTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 95
Query: 87 DIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
D+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 96 DVVEGEKGAEAANVTGPGGVPVQGSKYAAD 125
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 53/74 (71%)
Query: 194 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 253
P + TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEF
Sbjct: 36 PHLETTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 95
Query: 254 DIMQGDKGNQFCFV 267
D+++G+KG + V
Sbjct: 96 DVVEGEKGAEAANV 109
>gi|392876712|gb|AFM87188.1| nuclease-sensitive element-binding protein 1-like protein
[Callorhinchus milii]
Length = 334
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 68/88 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GET EFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETGEFDV 106
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 107 VEGEKGAEAANVTGPGGVPVQGSRYAAD 134
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GET EFD+
Sbjct: 47 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETGEFDV 106
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 107 VEGEKGAEAANVT 119
>gi|47123238|gb|AAH70000.1| Y box binding protein 1 [Danio rerio]
Length = 310
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 68/88 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEF +
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFAV 93
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 94 VEGEKGAEAANVTGPGGVPVQGSKYAAD 121
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEF +
Sbjct: 34 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFAV 93
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 94 VEGEKGAEAANVT 106
>gi|2073111|dbj|BAA19850.1| Y box protein 2 [Carassius auratus]
Length = 297
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%)
Query: 19 ANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 78
A+E P+ E V+AT V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++
Sbjct: 6 ASEQPQPERKVIATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSV 65
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
+GE VEFD+++ KG EA NVTGP G V+GS++A NK
Sbjct: 66 GDGEVVEFDVVEAAKGSEAANVTGPGGIPVKGSRYAPNK 104
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%)
Query: 186 ASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 245
ASE P+ E V+AT V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++
Sbjct: 6 ASEQPQPERKVIATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSV 65
Query: 246 AEGETVEFDIMQGDKGNQFCFVL 268
+GE VEFD+++ KG++ V
Sbjct: 66 GDGEVVEFDVVEAAKGSEAANVT 88
>gi|194207608|ref|XP_001916443.1| PREDICTED: nuclease-sensitive element-binding protein 1-like [Equus
caballus]
Length = 364
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 67/86 (77%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 96 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 155
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGP G VQGS++AA+
Sbjct: 156 GEKGAEAANVTGPGGVPVQGSKYAAD 181
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 96 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 155
Query: 258 GDKGNQFCFVL 268
G+KG + V
Sbjct: 156 GEKGAEAANVT 166
>gi|432120184|gb|ELK38717.1| Nuclease-sensitive element-binding protein 1 [Myotis davidii]
Length = 343
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%), Gaps = 4/113 (3%)
Query: 11 EATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 70
EAT + + ++PK+ V+A +V G VKWF+VK GYGFI + EDVF+H I NN
Sbjct: 59 EATVAAGTKEKAPKQ---VIAKRVSGSVKWFNVKHGYGFIRRHDTQEDVFIHHSAITRNN 115
Query: 71 PRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN-KPKYNR 122
P K +++ +GETVEFD++QG +G EA NVTGP G V+GS+FAAN +P++ R
Sbjct: 116 PHKYQRSVGDGETVEFDVVQGKQGIEAANVTGPGGAPVEGSRFAANRRPRFRR 168
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 178 EATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 237
EAT + + ++PK+ V+A +V G VKWF+VK GYGFI + EDVF+H I NN
Sbjct: 59 EATVAAGTKEKAPKQ---VIAKRVSGSVKWFNVKHGYGFIRRHDTQEDVFIHHSAITRNN 115
Query: 238 PRKLYKTLAEGETVEFDIMQGDKG 261
P K +++ +GETVEFD++QG +G
Sbjct: 116 PHKYQRSVGDGETVEFDVVQGKQG 139
>gi|148231227|ref|NP_001080330.1| B box-binding protein [Xenopus laevis]
gi|140247|sp|Q00436.1|YB3_XENLA RecName: Full=B box-binding protein; AltName: Full=Protein YB3
gi|65271|emb|CAA42778.1| YB3 [Xenopus laevis]
Length = 305
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 68/88 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 32 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP VQGS++AA+
Sbjct: 92 VEGEKGAEAANVTGPGPVPVQGSKYAAD 119
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 184 PSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 243
P+A+ KK V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +
Sbjct: 23 PAATVGEKK---VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR 79
Query: 244 TLAEGETVEFDIMQGDKGNQFCFVL 268
++ +GETVEFD+++G+KG + V
Sbjct: 80 SVGDGETVEFDVVEGEKGAEAANVT 104
>gi|410906961|ref|XP_003966960.1| PREDICTED: B box-binding protein-like [Takifugu rubripes]
Length = 342
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
Query: 8 TKAEATPSNPSA--NESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKR 65
T AEA + PSA + P+ E V+AT V G VKWF+V++GYGFI + EDVFVH
Sbjct: 2 TDAEAQSAPPSAPVEDKPQVERKVIATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTA 61
Query: 66 IKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
IK NNPRK +++ +GE VEFD+++ KG EA NVTGP G V+GS++A N
Sbjct: 62 IKRNNPRKFLRSVGDGEVVEFDVIEATKGSEAANVTGPGGVPVKGSRYAPN 112
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Query: 175 TKAEATPSNPSA--SESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKR 232
T AEA + PSA + P+ E V+AT V G VKWF+V++GYGFI + EDVFVH
Sbjct: 2 TDAEAQSAPPSAPVEDKPQVERKVIATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTA 61
Query: 233 IKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
IK NNPRK +++ +GE VEFD+++ KG++ V
Sbjct: 62 IKRNNPRKFLRSVGDGEVVEFDVIEATKGSEAANV 96
>gi|326932610|ref|XP_003212408.1| PREDICTED: nuclease-sensitive element-binding protein 1-like,
partial [Meleagris gallopavo]
Length = 134
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 67/86 (77%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 60
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGP G VQGS++AA+
Sbjct: 61 GEKGAEAANVTGPGGVPVQGSKYAAD 86
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 60
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 61 GEKGAEAANV 70
>gi|449679510|ref|XP_004209349.1| PREDICTED: uncharacterized protein LOC100211522 [Hydra
magnipapillata]
Length = 308
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 67/89 (75%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++A KV G VKWF+V++GYGFI + DVFVH I NNP K +++ +GETVEFD+
Sbjct: 31 IIANKVSGTVKWFNVRNGYGFIHRNDTQNDVFVHQTAIVKNNPNKYLRSVGDGETVEFDV 90
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G KGHEAINVTGP+G VQGS++A +K
Sbjct: 91 VEGVKGHEAINVTGPNGEPVQGSKYAPDK 119
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++A KV G VKWF+V++GYGFI + DVFVH I NNP K +++ +GETVEFD+
Sbjct: 31 IIANKVSGTVKWFNVRNGYGFIHRNDTQNDVFVHQTAIVKNNPNKYLRSVGDGETVEFDV 90
Query: 256 MQGDKGNQFCFVL 268
++G KG++ V
Sbjct: 91 VEGVKGHEAINVT 103
>gi|45382293|ref|NP_990737.1| cold shock domain protein A [Gallus gallus]
gi|727428|gb|AAA64706.1| Rous sarcoma virus transcription enhancer factor II [Gallus gallus]
Length = 298
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 64/83 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK ++ +GETVEFD+
Sbjct: 83 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDV 142
Query: 89 MQGDKGHEAINVTGPDGRHVQGS 111
++G+KG EA NVTGPDG V+GS
Sbjct: 143 VEGEKGAEAANVTGPDGVPVEGS 165
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK ++ +GETVEFD+
Sbjct: 83 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDV 142
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 143 VEGEKGAEAANV 154
>gi|194217599|ref|XP_001918171.1| PREDICTED: y-box-binding protein 2-like [Equus caballus]
Length = 291
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 67/88 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLA +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 36 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 95
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G V+GS++A N
Sbjct: 96 VEGEKGAEAANVTGPGGVPVKGSRYAPN 123
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 181 PSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRK 240
P+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK NNPRK
Sbjct: 24 PAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRK 80
Query: 241 LYKTLAEGETVEFDIMQGDKGNQFCFV 267
+++ +GETVEFD+++G+KG + V
Sbjct: 81 FLRSVGDGETVEFDVVEGEKGAEAANV 107
>gi|354502621|ref|XP_003513382.1| PREDICTED: nuclease-sensitive element-binding protein 1-like
[Cricetulus griseus]
Length = 337
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 66/85 (77%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++G
Sbjct: 70 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 129
Query: 92 DKGHEAINVTGPDGRHVQGSQFAAN 116
+KG EA NVTGP G VQGS++AA+
Sbjct: 130 EKGAEAANVTGPGGVPVQGSKYAAD 154
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++G
Sbjct: 70 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 129
Query: 259 DKGNQFCFV 267
+KG + V
Sbjct: 130 EKGAEAANV 138
>gi|505133|dbj|BAA05907.1| RYB-a [Rattus norvegicus]
Length = 291
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
+E VLATKV G VKWF+V++GYGFI + EDVFVH IK NN K +++ +GETV
Sbjct: 73 REKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNHVKYLRSVGDGETV 132
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
EFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 133 EFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 164
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
+E VLATKV G VKWF+V++GYGFI + EDVFVH IK NN K +++ +GETV
Sbjct: 73 REKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNHVKYLRSVGDGETV 132
Query: 252 EFDIMQGDKGNQFCFV 267
EFD+++G+KG + V
Sbjct: 133 EFDVVEGEKGAEAANV 148
>gi|1083796|pir||S48055 RYB-a protein - rat
Length = 291
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
+E VLATKV G VKWF+V++GYGFI + EDVFVH IK NN K +++ +GETV
Sbjct: 73 REKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNHVKYLRSVGDGETV 132
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
EFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 133 EFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 164
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
+E VLATKV G VKWF+V++GYGFI + EDVFVH IK NN K +++ +GETV
Sbjct: 73 REKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNHVKYLRSVGDGETV 132
Query: 252 EFDIMQGDKGNQFCFV 267
EFD+++G+KG + V
Sbjct: 133 EFDVVEGEKGAEAANV 148
>gi|403292124|ref|XP_003937105.1| PREDICTED: nuclease-sensitive element-binding protein 1 [Saimiri
boliviensis boliviensis]
Length = 422
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 67/86 (77%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 154 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 213
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGP G VQGS++AA+
Sbjct: 214 GEKGAEAANVTGPGGVPVQGSKYAAD 239
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 154 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 213
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 214 GEKGAEAANV 223
>gi|363894830|gb|AEW42978.1| putative Y-Box binding protein 1 [Haliotis diversicolor]
Length = 280
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 69/91 (75%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 85
E VLAT+V G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE VE
Sbjct: 16 EKKVLATRVTGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPKKYLRSVGDGEKVE 75
Query: 86 FDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
FD+++G+KG+EA +VTGP G VQGS++AA+
Sbjct: 76 FDVVEGEKGNEAASVTGPGGTFVQGSKYAAD 106
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 252
E VLAT+V G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE VE
Sbjct: 16 EKKVLATRVTGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPKKYLRSVGDGEKVE 75
Query: 253 FDIMQGDKGNQFCFVL 268
FD+++G+KGN+ V
Sbjct: 76 FDVVEGEKGNEAASVT 91
>gi|395538741|ref|XP_003771333.1| PREDICTED: DNA-binding protein A [Sarcophilus harrisii]
Length = 322
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 67/86 (77%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+++
Sbjct: 42 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEIVEFDVVE 101
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGPDG V+GS++AA+
Sbjct: 102 GEKGAEAANVTGPDGVPVEGSRYAAD 127
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+++
Sbjct: 42 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEIVEFDVVE 101
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 102 GEKGAEAANV 111
>gi|148698506|gb|EDL30453.1| mCG4206 [Mus musculus]
Length = 268
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 66/85 (77%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++G
Sbjct: 1 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 60
Query: 92 DKGHEAINVTGPDGRHVQGSQFAAN 116
+KG EA NVTGP G VQGS++AA+
Sbjct: 61 EKGAEAANVTGPGGVPVQGSKYAAD 85
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++G
Sbjct: 1 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 60
Query: 259 DKGNQFCFVL 268
+KG + V
Sbjct: 61 EKGAEAANVT 70
>gi|332849851|ref|XP_001142318.2| PREDICTED: Y-box-binding protein 2-like [Pan troglodytes]
Length = 333
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 68/92 (73%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +T+ +GETVEFD+++
Sbjct: 60 AIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQAAIKRNNPRKFLRTVGDGETVEFDVVE 119
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
G+KG EA NVTGP G V+GS++A N+ K R
Sbjct: 120 GEKGAEATNVTGPGGVPVKGSRYAPNRRKSRR 151
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +T+ +GETVEFD+++
Sbjct: 60 AIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQAAIKRNNPRKFLRTVGDGETVEFDVVE 119
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 120 GEKGAEATNV 129
>gi|259089373|ref|NP_001158512.1| Y-box binding protein [Oncorhynchus mykiss]
gi|219665297|gb|ACL31579.1| Y-box binding protein [Oncorhynchus mykiss]
Length = 301
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + +DVFVH IK NNPRK +++ +GE VEFD+
Sbjct: 35 VIATKVLGTVKWFNVRNGYGFINRNDTKDDVFVHQTAIKKNNPRKYLRSVGDGEIVEFDV 94
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G VQGS++AA+
Sbjct: 95 VEGEKGAEAANVTGPAGVPVQGSKYAAD 122
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 53/73 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + +DVFVH IK NNPRK +++ +GE VEFD+
Sbjct: 35 VIATKVLGTVKWFNVRNGYGFINRNDTKDDVFVHQTAIKKNNPRKYLRSVGDGEIVEFDV 94
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 95 VEGEKGAEAANVT 107
>gi|432920116|ref|XP_004079845.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100049372 [Oryzias latipes]
Length = 393
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 77/115 (66%), Gaps = 2/115 (1%)
Query: 3 MCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 62
M D T+A++ P A E + E V+AT V G VKWF+V++GYGFI + EDVFVH
Sbjct: 1 MTD--TEAQSPPPLLPAAEEKQSERKVIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVH 58
Query: 63 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
IK NNPRK +++ +GE VEFD+++ KG EA NVTGP G V+GS++A NK
Sbjct: 59 QTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYAPNK 113
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 170 MCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 229
M D T+A++ P A+E + E V+AT V G VKWF+V++GYGFI + EDVFVH
Sbjct: 1 MTD--TEAQSPPPLLPAAEEKQSERKVIATAVQGTVKWFNVRNGYGFINRNDTKEDVFVH 58
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
IK NNPRK +++ +GE VEFD+++ KG++ V
Sbjct: 59 QTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANV 96
>gi|355762957|gb|EHH62093.1| hypothetical protein EGM_20285 [Macaca fascicularis]
Length = 270
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 66/87 (75%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ GETVEFD++
Sbjct: 1 MTTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGGGETVEFDVV 60
Query: 90 QGDKGHEAINVTGPDGRHVQGSQFAAN 116
+G+KG EA NVTGP G VQGS++AA+
Sbjct: 61 EGEKGAEAANVTGPGGVPVQGSKYAAD 87
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ GETVEFD++
Sbjct: 1 MTTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGGGETVEFDVV 60
Query: 257 QGDKGNQFCFVL 268
+G+KG + V
Sbjct: 61 EGEKGAEAANVT 72
>gi|348542583|ref|XP_003458764.1| PREDICTED: hypothetical protein LOC100702319 [Oreochromis
niloticus]
Length = 339
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
Query: 8 TKAEATPSNPSA--NESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKR 65
T AEA + PSA + P+ E V+AT V G VKWF+V++GYGFI + EDVFVH
Sbjct: 2 TDAEAQSAPPSAPVEDKPQPERKVIATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTA 61
Query: 66 IKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
I NNPRK +++ +GE VEFD+++ KG EA NVTGP G V+GS++A NK
Sbjct: 62 ITKNNPRKFLRSVGDGEIVEFDVIEAAKGSEAANVTGPGGVPVKGSRYAPNK 113
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 175 TKAEATPSNPSA--SESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKR 232
T AEA + PSA + P+ E V+AT V G VKWF+V++GYGFI + EDVFVH
Sbjct: 2 TDAEAQSAPPSAPVEDKPQPERKVIATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTA 61
Query: 233 IKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
I NNPRK +++ +GE VEFD+++ KG++ V
Sbjct: 62 ITKNNPRKFLRSVGDGEIVEFDVIEAAKGSEAANVT 97
>gi|242008101|ref|XP_002424851.1| Y box binding protein, putative [Pediculus humanus corporis]
gi|212508401|gb|EEB12113.1| Y box binding protein, putative [Pediculus humanus corporis]
Length = 264
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 21 ESPK--KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 78
E PK ++ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNP+KL +++
Sbjct: 9 EQPKDVQQKQVIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPKKLVRSV 68
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
+GE VEFD++ G KG+EA NVTGP+G V+GS +AA+K
Sbjct: 69 GDGEVVEFDVVVGGKGNEAANVTGPNGEAVKGSPYAADK 107
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 188 ESPK--KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 245
E PK ++ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNP+KL +++
Sbjct: 9 EQPKDVQQKQVIANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPKKLVRSV 68
Query: 246 AEGETVEFDIMQGDKGNQFCFV 267
+GE VEFD++ G KGN+ V
Sbjct: 69 GDGEVVEFDVVVGGKGNEAANV 90
>gi|392331789|ref|XP_003752387.1| PREDICTED: Y-box-binding protein 2 isoform 2 [Rattus norvegicus]
Length = 282
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 66/88 (75%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
LA +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 13 ALAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 72
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G V+GS++A N
Sbjct: 73 VEGEKGAEAANVTGPGGVPVKGSRYAPN 100
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
LA +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 13 ALAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 72
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 73 VEGEKGAEAANV 84
>gi|2502064|gb|AAB80761.1| Y-box binding protein A [Columba livia]
Length = 278
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 64/83 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 63 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQAAIKKNNPRKYLRSVGDGETVEFDV 122
Query: 89 MQGDKGHEAINVTGPDGRHVQGS 111
++G+KG EA NV GPDG V+GS
Sbjct: 123 VEGEKGAEAANVHGPDGVPVEGS 145
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 63 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQAAIKKNNPRKYLRSVGDGETVEFDV 122
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 123 VEGEKGAEAANV 134
>gi|158934472|emb|CAL64870.1| putative RlYB2 protein [Pelophylax lessonae]
Length = 327
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 64/83 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 31 VLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 90
Query: 89 MQGDKGHEAINVTGPDGRHVQGS 111
++G+KG EA NVTGP G V+GS
Sbjct: 91 VEGEKGAEAANVTGPGGVPVKGS 113
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 31 VLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 90
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 91 VEGEKGAEAANVT 103
>gi|410979869|ref|XP_003996303.1| PREDICTED: Y-box-binding protein 2 [Felis catus]
Length = 350
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 69/91 (75%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 85
+P+ ++ +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVE
Sbjct: 78 QPLSISIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVE 137
Query: 86 FDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
FD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 138 FDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 168
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 55/75 (73%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 252
+P+ ++ +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVE
Sbjct: 78 QPLSISIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVE 137
Query: 253 FDIMQGDKGNQFCFV 267
FD+++G+KG + V
Sbjct: 138 FDVVEGEKGAEAANV 152
>gi|395748474|ref|XP_003780450.1| PREDICTED: LOW QUALITY PROTEIN: Y-box-binding protein 2 [Pongo
abelii]
Length = 358
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 66/86 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLA +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFA 114
++G+KG EA NVTGP G V+GS++A
Sbjct: 149 VEGEKGAEAANVTGPGGVPVKGSRYA 174
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLA +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 149 VEGEKGAEAANV 160
>gi|449482154|ref|XP_002188961.2| PREDICTED: uncharacterized protein LOC100227889 [Taeniopygia
guttata]
Length = 486
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 63/81 (77%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 273 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 332
Query: 91 GDKGHEAINVTGPDGRHVQGS 111
G+KG EA NVTGPDG V+GS
Sbjct: 333 GEKGAEAANVTGPDGVPVEGS 353
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 273 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 332
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 333 GEKGAEAANV 342
>gi|82802829|gb|ABB92460.1| rcNSEP1 [Homo sapiens]
Length = 319
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 68/89 (76%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH K NNPRK +++ +GE VEFD+
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G+KG +A NVTGP G VQGS++AA++
Sbjct: 110 VEGEKGAKAANVTGPGGVPVQGSKYAADR 138
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH K NNPRK +++ +GE VEFD+
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 110 VEGEKGAKAANVT 122
>gi|349804361|gb|AEQ17653.1| putative y box binding protein 1 [Hymenochirus curtipes]
Length = 289
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
+E V+ATKV G VKWF+V++GYGFI + E VFVH IK NNPRK +++ +GETV
Sbjct: 16 EEEKVIATKVLGTVKWFNVRNGYGFINRDDTKE-VFVHQTAIKKNNPRKYLRSVGDGETV 74
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
EFD+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 75 EFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 106
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
+E V+ATKV G VKWF+V++GYGFI + E VFVH IK NNPRK +++ +GETV
Sbjct: 16 EEEKVIATKVLGTVKWFNVRNGYGFINRDDTKE-VFVHQTAIKKNNPRKYLRSVGDGETV 74
Query: 252 EFDIMQGDKGNQFCFVL 268
EFD+++G+KG + V
Sbjct: 75 EFDVVEGEKGAEAANVT 91
>gi|194332739|ref|NP_001123667.1| Y box binding protein 2 [Xenopus (Silurana) tropicalis]
gi|187469386|gb|AAI66950.1| LOC100170415 protein [Xenopus (Silurana) tropicalis]
Length = 337
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 64/83 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 VLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 96
Query: 89 MQGDKGHEAINVTGPDGRHVQGS 111
++G+KG EA NVTGP G V+GS
Sbjct: 97 VEGEKGAEAANVTGPGGVPVKGS 119
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 VLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 96
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 97 VEGEKGAEAANVT 109
>gi|301778155|ref|XP_002924500.1| PREDICTED: hypothetical protein LOC100473556 [Ailuropoda
melanoleuca]
Length = 199
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 24 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 80
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G GS++A N
Sbjct: 81 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGG-APXGSRYAPN 128
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 24 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 80
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 81 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 113
>gi|281352187|gb|EFB27771.1| hypothetical protein PANDA_013847 [Ailuropoda melanoleuca]
Length = 163
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 24 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 80
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
NNPRK +++ +GETVEFD+++G+KG EA NVTGP G GS++A N
Sbjct: 81 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGG-APXGSRYAPN 128
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 175 TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 234
T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH IK
Sbjct: 24 TAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK 80
Query: 235 YNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 81 RNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 113
>gi|324511297|gb|ADY44709.1| Y-box factor [Ascaris suum]
Length = 294
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 66/89 (74%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++A + G VKWF+VK+GYGFI + ED+FVH + NNP K ++L +GE VEFD+
Sbjct: 33 IIARHIQGTVKWFNVKNGYGFINRADTGEDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 92
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G KG EA NVTGPDG +V+GS++AA+K
Sbjct: 93 VEGQKGPEAANVTGPDGTNVEGSKYAADK 121
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++A + G VKWF+VK+GYGFI + ED+FVH + NNP K ++L +GE VEFD+
Sbjct: 33 IIARHIQGTVKWFNVKNGYGFINRADTGEDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 92
Query: 256 MQGDKGNQFCFVL 268
++G KG + V
Sbjct: 93 VEGQKGPEAANVT 105
>gi|147902111|ref|NP_001081274.1| Y-box-binding protein 2-A [Xenopus laevis]
gi|288558836|sp|P21574.3|YBX2A_XENLA RecName: Full=Y-box-binding protein 2-A; AltName: Full=Cytoplasmic
RNA-binding protein p56; AltName: Full=Frog Y-box
protein 2; Short=FRG Y2; AltName: Full=Frog Y-box
protein 2-A; Short=FRGY2a; AltName: Full=Messenger
ribonucleoprotein particle 4; Short=mRNP4
gi|214157|gb|AAA49716.1| DNA-binding protein [Xenopus laevis]
gi|213623410|gb|AAI69706.1| Sequence -specific binding protein [Xenopus laevis]
gi|213625048|gb|AAI69704.1| Sequence -specific binding protein [Xenopus laevis]
Length = 336
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 64/83 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 VLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 96
Query: 89 MQGDKGHEAINVTGPDGRHVQGS 111
++G+KG EA NVTGP G V+GS
Sbjct: 97 VEGEKGAEAANVTGPGGVPVKGS 119
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 VLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 96
Query: 256 MQGDKGNQFCFVL 268
++G+KG + V
Sbjct: 97 VEGEKGAEAANVT 109
>gi|341889079|gb|EGT45014.1| CBN-CEY-1 protein [Caenorhabditis brenneri]
Length = 205
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAE 80
E P ++PV ATKV G VKWF+VK+GYGFI +NED+FVH I NNP K ++L +
Sbjct: 9 EQPTEKPV-KATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGD 67
Query: 81 GETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYN 121
E V FDI++G KG EA NVTGPDG VQGS++AA++ N
Sbjct: 68 NEEVLFDIVEGSKGLEASNVTGPDGGPVQGSKYAADRDGEN 108
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 187 SESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLA 246
+E P ++PV ATKV G VKWF+VK+GYGFI +NED+FVH I NNP K ++L
Sbjct: 8 AEQPTEKPV-KATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLG 66
Query: 247 EGETVEFDIMQGDKG 261
+ E V FDI++G KG
Sbjct: 67 DNEEVLFDIVEGSKG 81
>gi|308510156|ref|XP_003117261.1| CRE-CEY-1 protein [Caenorhabditis remanei]
gi|308242175|gb|EFO86127.1| CRE-CEY-1 protein [Caenorhabditis remanei]
Length = 202
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAE 80
E P ++PV ATKV G VKWF+VK+GYGFI +NED+FVH I NNP K ++L +
Sbjct: 9 EQPIEKPV-KATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGD 67
Query: 81 GETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYN 121
E V FDI++G KG EA NVTGPDG VQGS++AA++ N
Sbjct: 68 NEEVLFDIVEGSKGLEASNVTGPDGGPVQGSKYAADRDSEN 108
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 187 SESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLA 246
+E P ++PV ATKV G VKWF+VK+GYGFI +NED+FVH I NNP K ++L
Sbjct: 8 AEQPIEKPV-KATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLG 66
Query: 247 EGETVEFDIMQGDKG 261
+ E V FDI++G KG
Sbjct: 67 DNEEVLFDIVEGSKG 81
>gi|161612267|gb|AAI55915.1| FRGY2 protein [Xenopus laevis]
Length = 342
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 64/83 (77%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 VLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 96
Query: 89 MQGDKGHEAINVTGPDGRHVQGS 111
++G+KG EA NVTGP G V+GS
Sbjct: 97 VEGEKGAEAANVTGPGGVPVKGS 119
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 37 VLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDV 96
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 97 VEGEKGAEAANV 108
>gi|17533635|ref|NP_496366.1| Protein CEY-1 [Caenorhabditis elegans]
gi|3876637|emb|CAB04257.1| Protein CEY-1 [Caenorhabditis elegans]
Length = 208
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAE 80
E P +PV ATKV G VKWF+VK+GYGFI +NED+FVH I NNP K ++L +
Sbjct: 9 EQPADKPV-KATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGD 67
Query: 81 GETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYN 121
E V FDI++G KG EA +VTGPDG VQGS++AA++ N
Sbjct: 68 NEEVMFDIVEGSKGLEAASVTGPDGGPVQGSKYAADRDAEN 108
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 187 SESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLA 246
+E P +PV ATKV G VKWF+VK+GYGFI +NED+FVH I NNP K ++L
Sbjct: 8 AEQPADKPV-KATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLG 66
Query: 247 EGETVEFDIMQGDKGNQFCFV 267
+ E V FDI++G KG + V
Sbjct: 67 DNEEVMFDIVEGSKGLEAASV 87
>gi|300119946|gb|ADJ67998.1| Y-box protein [Samia ricini]
Length = 264
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
P K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE
Sbjct: 26 PAKQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGE 85
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPK-YNRR 123
VEF ++ G+KG+EA VTGP G V+GS +AA+K + Y+R+
Sbjct: 86 AVEFAVVAGEKGYEAARVTGPGGESVKGSPYAADKRRSYHRQ 127
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
P K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE
Sbjct: 26 PAKQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGE 85
Query: 250 TVEFDIMQGDKGNQFCFVL 268
VEF ++ G+KG + V
Sbjct: 86 AVEFAVVAGEKGYEAARVT 104
>gi|334349550|ref|XP_003342217.1| PREDICTED: y-box-binding protein 2-like [Monodelphis domestica]
Length = 345
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 66/88 (75%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 76 VLATQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 135
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+K EA NVTGP V+GS++A N
Sbjct: 136 VEGEKSAEAANVTGPGEIPVKGSRYAPN 163
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLAT+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 76 VLATQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 135
Query: 256 MQGDKGNQFCFV 267
++G+K + V
Sbjct: 136 VEGEKSAEAANV 147
>gi|291405168|ref|XP_002719041.1| PREDICTED: Y box binding protein 2 [Oryctolagus cuniculus]
Length = 275
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 66/89 (74%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD
Sbjct: 5 VKPAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFD 64
Query: 88 IMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++G+KG EA NVTGP G V+GS++A N
Sbjct: 65 VVEGEKGAEAANVTGPGGVPVKGSRYAPN 93
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD
Sbjct: 5 VKPAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFD 64
Query: 255 IMQGDKGNQFCFV 267
+++G+KG + V
Sbjct: 65 VVEGEKGAEAANV 77
>gi|395730664|ref|XP_003780455.1| PREDICTED: LOW QUALITY PROTEIN: nuclease-sensitive element-binding
protein 1 [Pongo abelii]
Length = 409
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFV-HSKRIKYNNPRKLYKTLAEGETVEFD 87
V+ATKV G VKWF+V++GYGFI + EDVFV H IK N PR+ +++ +GETVEFD
Sbjct: 138 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVVHQTAIKKNXPRRYLRSVGDGETVEFD 197
Query: 88 IMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 198 VVEGEKGAEAANVTGPGGVPVQGSKYAAD 226
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVF-VHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+ATKV G VKWF+V++GYGFI + EDVF VH IK N PR+ +++ +GETVEFD
Sbjct: 138 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVVHQTAIKKNXPRRYLRSVGDGETVEFD 197
Query: 255 IMQGDKGNQFCFV 267
+++G+KG + V
Sbjct: 198 VVEGEKGAEAANV 210
>gi|4071323|gb|AAC98674.1| Y-box protein MSY2 isoform a [Mus musculus]
Length = 282
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 65/88 (73%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
LA +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 13 ALAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 72
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG A NVTGP G V+GS++A N
Sbjct: 73 VEGEKGARAANVTGPGGVPVKGSRYAPN 100
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
LA +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 13 ALAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 72
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 73 VEGEKGARAANV 84
>gi|395836766|ref|XP_003791321.1| PREDICTED: Y-box-binding protein 2 [Otolemur garnettii]
Length = 270
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+ A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 MAAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 60
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G V+GS++A N
Sbjct: 61 VEGEKGAEAANVTGPGGVPVKGSRYAPN 88
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+ A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 1 MAAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 60
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 61 VEGEKGAEAANV 72
>gi|449266809|gb|EMC77811.1| DNA-binding protein A, partial [Columba livia]
Length = 214
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 63/81 (77%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 60
Query: 91 GDKGHEAINVTGPDGRHVQGS 111
G+KG EA NVTGPDG V+GS
Sbjct: 61 GEKGAEAANVTGPDGVPVEGS 81
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVE 60
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 61 GEKGAEAANV 70
>gi|426238806|ref|XP_004013335.1| PREDICTED: Y-box-binding protein 2 [Ovis aries]
Length = 299
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+ A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 30 LAAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 89
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA NVTGP G V+GS++A N
Sbjct: 90 VEGEKGAEAANVTGPGGVPVKGSRYAPN 117
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+ A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 30 LAAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 89
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 90 VEGEKGAEAANV 101
>gi|440910817|gb|ELR60573.1| Y-box-binding protein 2, partial [Bos grunniens mutus]
Length = 268
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 65/86 (75%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 AIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVE 60
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGP G V+GS++A N
Sbjct: 61 GEKGAEAANVTGPGGVPVKGSRYAPN 86
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 AIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVE 60
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 61 GEKGAEAANV 70
>gi|403275363|ref|XP_003929419.1| PREDICTED: Y-box-binding protein 2 [Saimiri boliviensis
boliviensis]
Length = 517
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 65/86 (75%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 250 AIRVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVE 309
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGP G V+GS++A N
Sbjct: 310 GEKGAEAANVTGPGGVPVKGSRYAPN 335
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 250 AIRVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVE 309
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 310 GEKGAEAANV 319
>gi|156385226|ref|XP_001633532.1| predicted protein [Nematostella vectensis]
gi|156220603|gb|EDO41469.1| predicted protein [Nematostella vectensis]
Length = 98
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 68/95 (71%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+ ATKV G VKWF+VK+GYGFI + ED+FVH I NNP+K +++ +GE VEF++
Sbjct: 3 IAATKVTGTVKWFNVKNGYGFINRDDNKEDIFVHQTAIAKNNPKKYLRSVGDGEVVEFNV 62
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
+ G KG EA NVTGPDG VQGS++A ++ + N R
Sbjct: 63 VSGTKGLEASNVTGPDGEPVQGSKYAPDRRRRNNR 97
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+ ATKV G VKWF+VK+GYGFI + ED+FVH I NNP+K +++ +GE VEF++
Sbjct: 3 IAATKVTGTVKWFNVKNGYGFINRDDNKEDIFVHQTAIAKNNPKKYLRSVGDGEVVEFNV 62
Query: 256 MQGDKG 261
+ G KG
Sbjct: 63 VSGTKG 68
>gi|148680545|gb|EDL12492.1| Y box protein 2 [Mus musculus]
Length = 268
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 65/86 (75%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 AIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVE 60
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAAN 116
G+KG EA NVTGP G V+GS++A N
Sbjct: 61 GEKGAEAANVTGPGGVPVKGSRYAPN 86
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
A +V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++
Sbjct: 1 AIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVE 60
Query: 258 GDKGNQFCFV 267
G+KG + V
Sbjct: 61 GEKGAEAANV 70
>gi|268532128|ref|XP_002631192.1| C. briggsae CBR-CEY-1 protein [Caenorhabditis briggsae]
Length = 202
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAE 80
E P ++PV ATKV G VKWF+VK+GYGFI +NED+FVH I NNP K ++L +
Sbjct: 9 EQPAEKPV-KATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGD 67
Query: 81 GETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYN 121
E V FDI++G KG EA +VTGPDG VQGS++AA++ N
Sbjct: 68 NEEVLFDIVEGSKGLEASSVTGPDGGPVQGSKYAADRDSEN 108
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 187 SESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLA 246
+E P ++PV ATKV G VKWF+VK+GYGFI +NED+FVH I NNP K ++L
Sbjct: 8 AEQPAEKPV-KATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLG 66
Query: 247 EGETVEFDIMQGDKG 261
+ E V FDI++G KG
Sbjct: 67 DNEEVLFDIVEGSKG 81
>gi|427782109|gb|JAA56506.1| Putative rna-binding protein [Rhipicephalus pulchellus]
Length = 373
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 70/93 (75%)
Query: 24 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 83
+K+ VLA +V G VKWF+VK+GYGFI + ED+FVH I NNP K+ +++ EGET
Sbjct: 14 RKKKEVLAERVLGTVKWFNVKNGYGFINRNDTKEDIFVHQTAITKNNPLKVVRSVGEGET 73
Query: 84 VEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
VEFD++ G+KG+EA NVTGP+G V+GS +AA+
Sbjct: 74 VEFDVVVGEKGNEAANVTGPEGVPVKGSPYAAD 106
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 186 ASESP--KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 243
SE P +K+ VLA +V G VKWF+VK+GYGFI + ED+FVH I NNP K+ +
Sbjct: 7 GSEEPVSRKKKEVLAERVLGTVKWFNVKNGYGFINRNDTKEDIFVHQTAITKNNPLKVVR 66
Query: 244 TLAEGETVEFDIMQGDKGNQFCFVL 268
++ EGETVEFD++ G+KGN+ V
Sbjct: 67 SVGEGETVEFDVVVGEKGNEAANVT 91
>gi|326912755|ref|XP_003202712.1| PREDICTED: nuclease-sensitive element-binding protein 1-like
[Meleagris gallopavo]
Length = 253
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 64/86 (74%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 85
E V TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVE
Sbjct: 35 ESVDDPTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 94
Query: 86 FDIMQGDKGHEAINVTGPDGRHVQGS 111
FD+++G+KG EA NVTGPDG V+GS
Sbjct: 95 FDVVEGEKGAEAANVTGPDGVPVEGS 120
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 252
E V TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVE
Sbjct: 35 ESVDDPTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 94
Query: 253 FDIMQGDKGNQFCFV 267
FD+++G+KG + V
Sbjct: 95 FDVVEGEKGAEAANV 109
>gi|149898790|gb|ABR27857.1| predicted RNA-binding protein [Triatoma infestans]
Length = 300
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 66/88 (75%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
LA KV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GETVEFD++
Sbjct: 51 LALKVTGTVKWFNVKSGYGFINRKDTGEDVFVHQSAIIKNNPKKAVRSVGDGETVEFDVV 110
Query: 90 QGDKGHEAINVTGPDGRHVQGSQFAANK 117
G+KG+EA NVTG +G V+GS +AA+K
Sbjct: 111 AGEKGNEAANVTGENGAAVKGSPYAADK 138
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
LA KV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GETVEFD++
Sbjct: 51 LALKVTGTVKWFNVKSGYGFINRKDTGEDVFVHQSAIIKNNPKKAVRSVGDGETVEFDVV 110
Query: 257 QGDKGNQFCFV 267
G+KGN+ V
Sbjct: 111 AGEKGNEAANV 121
>gi|47214045|emb|CAG00703.1| unnamed protein product [Tetraodon nigroviridis]
Length = 134
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%)
Query: 27 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 86
PV++AT V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEF
Sbjct: 1 PVLVATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEF 60
Query: 87 DIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
D+++ KG EA NVTGP G V+GS++A N
Sbjct: 61 DVIEAAKGSEAANVTGPGGVPVKGSRYAPN 90
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 53/74 (71%)
Query: 194 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 253
PV++AT V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEF
Sbjct: 1 PVLVATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEF 60
Query: 254 DIMQGDKGNQFCFV 267
D+++ KG++ V
Sbjct: 61 DVIEAAKGSEAANV 74
>gi|443732375|gb|ELU17129.1| hypothetical protein CAPTEDRAFT_50882, partial [Capitella teleta]
Length = 109
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 69/95 (72%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+++KV G VKWF+V+ GYGFI + EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 6 VISSKVTGAVKWFNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKVEFDV 65
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++ +KG++A NVTGP+G VQGS++AAN+ + R
Sbjct: 66 VEAEKGNQAANVTGPEGESVQGSKYAANRRHFRPR 100
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+++KV G VKWF+V+ GYGFI + EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 6 VISSKVTGAVKWFNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKVEFDV 65
Query: 256 MQGDKGNQFCFV 267
++ +KGNQ V
Sbjct: 66 VEAEKGNQAANV 77
>gi|345320052|ref|XP_001517390.2| PREDICTED: DNA-binding protein A-like, partial [Ornithorhynchus
anatinus]
Length = 141
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 63/83 (75%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+ TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 36 IQTTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 95
Query: 89 MQGDKGHEAINVTGPDGRHVQGS 111
++G+KG EA NVTGPDG V+GS
Sbjct: 96 VEGEKGAEAANVTGPDGVPVEGS 118
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+ TKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 36 IQTTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 95
Query: 256 MQGDKG 261
++G+KG
Sbjct: 96 VEGEKG 101
>gi|91081961|ref|XP_966594.1| PREDICTED: similar to Y-box binding protein isoform 1 [Tribolium
castaneum]
gi|270007364|gb|EFA03812.1| hypothetical protein TcasGA2_TC013925 [Tribolium castaneum]
Length = 297
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 69/93 (74%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
K+ V+A+KV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE V
Sbjct: 20 KQKEVIASKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIIKNNPKKAVRSVGDGEIV 79
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
EF ++ G+KG+EA NVTGP+G V+GS +AA++
Sbjct: 80 EFSVVVGEKGNEAANVTGPNGEPVRGSPYAADR 112
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
K+ V+A+KV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE V
Sbjct: 20 KQKEVIASKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIIKNNPKKAVRSVGDGEIV 79
Query: 252 EFDIMQGDKGNQFCFVL 268
EF ++ G+KGN+ V
Sbjct: 80 EFSVVVGEKGNEAANVT 96
>gi|301170784|dbj|BAJ12006.1| y box protein [Samia cynthia walkeri]
Length = 139
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE V
Sbjct: 4 KQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAV 63
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPK-YNRR 123
EF ++ G+KG+EA VTGP G V+GS +AA+K + Y+R+
Sbjct: 64 EFAVVAGEKGYEAARVTGPGGESVKGSPYAADKRRSYHRQ 103
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE V
Sbjct: 4 KQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAV 63
Query: 252 EFDIMQGDKGNQFCFV 267
EF ++ G+KG + V
Sbjct: 64 EFAVVAGEKGYEAARV 79
>gi|431919670|gb|ELK18054.1| Y-box-binding protein 2-B [Pteropus alecto]
Length = 320
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 62/84 (73%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
V G VKWF+VK GYGFI + EDVFVH I NNP K +++ +GETVEFD++QG++
Sbjct: 69 VRGSVKWFNVKKGYGFIRRHDTEEDVFVHHTAITRNNPHKYQRSVGDGETVEFDVVQGER 128
Query: 94 GHEAINVTGPDGRHVQGSQFAANK 117
G EA NVTGP G V+GS+FAAN+
Sbjct: 129 GTEAANVTGPAGAPVEGSRFAANR 152
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
V G VKWF+VK GYGFI + EDVFVH I NNP K +++ +GETVEFD++QG++
Sbjct: 69 VRGSVKWFNVKKGYGFIRRHDTEEDVFVHHTAITRNNPHKYQRSVGDGETVEFDVVQGER 128
Query: 261 GNQFCFV 267
G + V
Sbjct: 129 GTEAANV 135
>gi|321173535|gb|ADW77530.1| cold-shock-like protein [Heterodera glycines]
Length = 238
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 68/97 (70%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 85
E +L+ V GVVKWF+V +GYGFI +N+D+FVH+ I NNP K+ ++L +GE V
Sbjct: 30 EKKILSKGVSGVVKWFNVMNGYGFICRDDTNDDIFVHNSAITANNPSKIQRSLGDGEKVM 89
Query: 86 FDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
FDI+ G KG EA NVTGPDG VQGS++AA+ + R
Sbjct: 90 FDIVDGAKGPEAANVTGPDGVPVQGSKYAADLSQRRR 126
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 170 MCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 229
+ +S +AE T N KK +L+ V GVVKWF+V +GYGFI +N+D+FVH
Sbjct: 10 INNSEGEAENTTKNGGEEGVEKK---ILSKGVSGVVKWFNVMNGYGFICRDDTNDDIFVH 66
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
+ I NNP K+ ++L +GE V FDI+ G KG + V
Sbjct: 67 NSAITANNPSKIQRSLGDGEKVMFDIVDGAKGPEAANVT 105
>gi|148681705|gb|EDL13652.1| mCG50433 [Mus musculus]
Length = 305
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 65/88 (73%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ TKV G V+W +V++GY FI + EDVFVH I+ NNPRK +++ +GETVEFD+
Sbjct: 53 VITTKVLGTVRWINVRNGYSFINRNDTKEDVFVHQTAIRKNNPRKYLRSVGDGETVEFDV 112
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
++G+KG EA VTGP G VQGS++AA+
Sbjct: 113 VEGEKGAEAAKVTGPGGVPVQGSKYAAD 140
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ TKV G V+W +V++GY FI + EDVFVH I+ NNPRK +++ +GETVEFD+
Sbjct: 53 VITTKVLGTVRWINVRNGYSFINRNDTKEDVFVHQTAIRKNNPRKYLRSVGDGETVEFDV 112
Query: 256 MQGDKGNQFCFV 267
++G+KG + V
Sbjct: 113 VEGEKGAEAAKV 124
>gi|91081963|ref|XP_975913.1| PREDICTED: similar to Y-box binding protein isoform 2 [Tribolium
castaneum]
Length = 286
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 69/93 (74%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
K+ V+A+KV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE V
Sbjct: 20 KQKEVIASKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIIKNNPKKAVRSVGDGEIV 79
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
EF ++ G+KG+EA NVTGP+G V+GS +AA++
Sbjct: 80 EFSVVVGEKGNEAANVTGPNGEPVRGSPYAADR 112
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
K+ V+A+KV G VKWF+VKSGYGFI + EDVFVH I NNP+K +++ +GE V
Sbjct: 20 KQKEVIASKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIIKNNPKKAVRSVGDGEIV 79
Query: 252 EFDIMQGDKGNQFCFVL 268
EF ++ G+KGN+ V
Sbjct: 80 EFSVVVGEKGNEAANVT 96
>gi|112982792|ref|NP_001036897.1| Y-box protein [Bombyx mori]
gi|49532669|dbj|BAD26606.1| Y-box protein [Bombyx mori]
Length = 259
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE V
Sbjct: 29 KQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAV 88
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPK-YNRR 123
EF ++ G+KG EA VTGP G V+GS +AA+K + Y+R+
Sbjct: 89 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQ 128
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE V
Sbjct: 29 KQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAV 88
Query: 252 EFDIMQGDKG 261
EF ++ G+KG
Sbjct: 89 EFAVVAGEKG 98
>gi|432089943|gb|ELK23588.1| Nuclease-sensitive element-binding protein 1 [Myotis davidii]
Length = 229
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+A KV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETV FD+
Sbjct: 46 VIARKVWGTVKWFNVRNGYGFINRNDTEEDVFVHQTAIK-NNPRKYLRSIGDGETVAFDV 104
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRRN 137
++G+KG A NVTGP G VQGS++AA+ Y + R+R RN
Sbjct: 105 VEGEKGAGAANVTGPGGVPVQGSKYAADHNHY-----RGYPRRRGPPRN 148
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+A KV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETV FD+
Sbjct: 46 VIARKVWGTVKWFNVRNGYGFINRNDTEEDVFVHQTAIK-NNPRKYLRSIGDGETVAFDV 104
Query: 256 MQGDKG 261
++G+KG
Sbjct: 105 VEGEKG 110
>gi|443683711|gb|ELT87868.1| hypothetical protein CAPTEDRAFT_58124, partial [Capitella teleta]
Length = 109
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 69/95 (72%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+++KV G VKWF+V+ GYGFI + EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 6 VISSKVTGAVKWFNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSIGDGEKVEFDV 65
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++ +KG++A NVTGP+G VQGS++AA++ + R
Sbjct: 66 VKAEKGNQAANVTGPEGESVQGSKYAADRRHFRPR 100
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+++KV G VKWF+V+ GYGFI + EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 6 VISSKVTGAVKWFNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSIGDGEKVEFDV 65
Query: 256 MQGDKGNQFCFV 267
++ +KGNQ V
Sbjct: 66 VKAEKGNQAANV 77
>gi|123301101|dbj|BAF45318.1| Y-box protein [Bombyx mori]
Length = 272
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE V
Sbjct: 29 KQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAV 88
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPK-YNRR 123
EF ++ G+KG EA VTGP G V+GS +AA+K + Y+R+
Sbjct: 89 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQ 128
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE V
Sbjct: 29 KQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAV 88
Query: 252 EFDIMQGDKG 261
EF ++ G+KG
Sbjct: 89 EFAVVAGEKG 98
>gi|393907738|gb|EJD74760.1| pseudouridine synthase, variant 1 [Loa loa]
Length = 313
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 66/89 (74%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 75 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 134
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G KG EA NVTGP+G +V+GS++AA+K
Sbjct: 135 VEGQKGPEAANVTGPNGGNVEGSRYAADK 163
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 75 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 134
Query: 256 MQGDKGNQFCFV 267
++G KG + V
Sbjct: 135 VEGQKGPEAANV 146
>gi|393907737|gb|EJD74759.1| pseudouridine synthase [Loa loa]
Length = 315
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 66/89 (74%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 75 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 134
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G KG EA NVTGP+G +V+GS++AA+K
Sbjct: 135 VEGQKGPEAANVTGPNGGNVEGSRYAADK 163
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 75 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 134
Query: 256 MQGDKGNQFCFV 267
++G KG + V
Sbjct: 135 VEGQKGPEAANV 146
>gi|393907739|gb|EJD74761.1| pseudouridine synthase, variant 2 [Loa loa]
Length = 270
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 66/89 (74%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 32 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G KG EA NVTGP+G +V+GS++AA+K
Sbjct: 92 VEGQKGPEAANVTGPNGGNVEGSRYAADK 120
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 32 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 91
Query: 256 MQGDKGNQFCFV 267
++G KG + V
Sbjct: 92 VEGQKGPEAANV 103
>gi|443704660|gb|ELU01604.1| hypothetical protein CAPTEDRAFT_48958, partial [Capitella teleta]
Length = 109
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 69/95 (72%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+++KV GVVKWF+V GYGFI + EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 6 VISSKVTGVVKWFNVWRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKVEFDV 65
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++ +KG++A NVTGP+G VQGS++AA++ + R
Sbjct: 66 VKAEKGNQAANVTGPEGESVQGSKYAADRRHFRPR 100
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+++KV GVVKWF+V GYGFI + EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 6 VISSKVTGVVKWFNVWRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKVEFDV 65
Query: 256 MQGDKGNQFCFV 267
++ +KGNQ V
Sbjct: 66 VKAEKGNQAANV 77
>gi|118344436|ref|NP_001072039.1| Y-box protein 1/2/3 [Ciona intestinalis]
gi|70571495|dbj|BAE06760.1| Y-box protein 1/2/3 [Ciona intestinalis]
Length = 273
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLA+ GVVKWF+V++GYGF+ + EDVF+H I NNP+K +++ +GE VEFD+
Sbjct: 21 VLASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDV 80
Query: 89 MQGDKG-HEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++G+KG EA NVTGP+G V+GS++AA++ +Y R
Sbjct: 81 VEGEKGLPEAANVTGPNGEPVKGSKYAADRRRYKPR 116
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 49/66 (74%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLA+ GVVKWF+V++GYGF+ + EDVF+H I NNP+K +++ +GE VEFD+
Sbjct: 21 VLASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDV 80
Query: 256 MQGDKG 261
++G+KG
Sbjct: 81 VEGEKG 86
>gi|354469771|ref|XP_003497297.1| PREDICTED: Y-box-binding protein 2-like [Cricetulus griseus]
Length = 403
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 62/81 (76%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++G+
Sbjct: 138 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 197
Query: 93 KGHEAINVTGPDGRHVQGSQF 113
KG EA NVTGP G V+GS++
Sbjct: 198 KGAEAANVTGPGGVPVKGSRY 218
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
+V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+++G+
Sbjct: 138 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 197
Query: 260 KGNQFCFV 267
KG + V
Sbjct: 198 KGAEAANV 205
>gi|118344374|ref|NP_001072010.1| Y-box protein 1/2/3 [Ciona intestinalis]
gi|70571490|dbj|BAE06759.1| Y-box protein 1/2/3 [Ciona intestinalis]
Length = 320
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLA+ GVVKWF+V++GYGF+ + EDVF+H I NNP+K +++ +GE VEFD+
Sbjct: 21 VLASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDV 80
Query: 89 MQGDKG-HEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++G+KG EA NVTGP+G V+GS++AA++ +Y R
Sbjct: 81 VEGEKGLPEAANVTGPNGEPVKGSKYAADRRRYKPR 116
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 49/66 (74%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLA+ GVVKWF+V++GYGF+ + EDVF+H I NNP+K +++ +GE VEFD+
Sbjct: 21 VLASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDV 80
Query: 256 MQGDKG 261
++G+KG
Sbjct: 81 VEGEKG 86
>gi|357619314|gb|EHJ71938.1| Y-box protein [Danaus plexippus]
Length = 272
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE VEF +
Sbjct: 35 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 94
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
+ G+KG+EA VTGP G +GS +AA+K
Sbjct: 95 VAGEKGYEAAGVTGPGGEPGKGSPYAADK 123
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE VEF +
Sbjct: 35 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 94
Query: 256 MQGDKGNQFCFV 267
+ G+KG + V
Sbjct: 95 VAGEKGYEAAGV 106
>gi|443684315|gb|ELT88267.1| hypothetical protein CAPTEDRAFT_119722 [Capitella teleta]
Length = 123
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 69/95 (72%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+++KV G VKWF+++ GYGFI + EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 8 VISSKVTGAVKWFNMRRGYGFINRDDTQEDVFVHHTAIVKNNPHKCLRSVGDGEKVEFDV 67
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++ +KG++A NVTGP+G VQGS++AA++ + R
Sbjct: 68 VEAEKGNQAANVTGPEGESVQGSKYAADRRHFRPR 102
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+++KV G VKWF+++ GYGFI + EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 8 VISSKVTGAVKWFNMRRGYGFINRDDTQEDVFVHHTAIVKNNPHKCLRSVGDGEKVEFDV 67
Query: 256 MQGDKGNQ 263
++ +KGNQ
Sbjct: 68 VEAEKGNQ 75
>gi|443719190|gb|ELU09464.1| hypothetical protein CAPTEDRAFT_115648 [Capitella teleta]
Length = 124
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 68/95 (71%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+++KV GVVKWF+V+ GYGFI EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 4 VISSKVTGVVKWFNVRRGYGFINRDDMQEDVFVHHTAIVKNNPHKYLRSVGDGEKVEFDV 63
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++ +KG++A NVTGP+G VQGS+ AA++ + R
Sbjct: 64 VKAEKGNQAANVTGPEGESVQGSKHAADRRHFRPR 98
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+++KV GVVKWF+V+ GYGFI EDVFVH I NNP K +++ +GE VEFD+
Sbjct: 4 VISSKVTGVVKWFNVRRGYGFINRDDMQEDVFVHHTAIVKNNPHKYLRSVGDGEKVEFDV 63
Query: 256 MQGDKGNQFCFV 267
++ +KGNQ V
Sbjct: 64 VKAEKGNQAANV 75
>gi|114615287|ref|XP_510011.2| PREDICTED: nuclease-sensitive element-binding protein 1-like [Pan
troglodytes]
Length = 379
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+A KV G VKWF+V++GYGFI + EDVFV IK NNPRK +++ +GETVEFD+
Sbjct: 110 VIAVKVLGTVKWFNVRNGYGFINRNDTKEDVFVPQTAIK-NNPRKYLRSVGDGETVEFDV 168
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
++G+K EA NVT P G VQGS++AA++ Y R
Sbjct: 169 VEGEKDAEAANVTDPGGVPVQGSKYAADRNHYRR 202
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+A KV G VKWF+V++GYGFI + EDVFV IK NNPRK +++ +GETVEFD+
Sbjct: 110 VIAVKVLGTVKWFNVRNGYGFINRNDTKEDVFVPQTAIK-NNPRKYLRSVGDGETVEFDV 168
Query: 256 MQGDK 260
++G+K
Sbjct: 169 VEGEK 173
>gi|170596965|ref|XP_001902961.1| 'Cold-shock' DNA-binding domain containing protein [Brugia malayi]
gi|158589027|gb|EDP28189.1| 'Cold-shock' DNA-binding domain containing protein [Brugia malayi]
Length = 290
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 65/89 (73%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 53 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 112
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G KG EA NVTGP+G +V+GS++A +K
Sbjct: 113 VEGQKGPEAANVTGPNGSNVEGSRYAVDK 141
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 53 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 112
Query: 256 MQGDKGNQFCFV 267
++G KG + V
Sbjct: 113 VEGQKGPEAANV 124
>gi|12862280|dbj|BAB32397.1| unnamed protein product [Mus musculus]
gi|148685263|gb|EDL17210.1| mCG147570 [Mus musculus]
Length = 199
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 20/151 (13%)
Query: 14 PSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRK 73
PS+ ++ S + V+A KV G VK F V++GYGFI + ED+FVH IK NNPRK
Sbjct: 33 PSSLTSAASAGGDKKVIAAKVLGTVKGFKVRNGYGFINRNDTKEDIFVHQTAIKKNNPRK 92
Query: 74 LYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRK 133
+++ +GET EFD+++G+ G EA NVT P G VQGS++AA+ +N + + K K
Sbjct: 93 YLRSVGDGETEEFDVVEGESGAEAANVTDPGGVPVQGSKYAAD---HNVSLSSCSLVKSK 149
Query: 134 SRRNNRLFGVKYQLEIPMEFSSKTMPFFMIL 164
+L +P+EF P F+++
Sbjct: 150 ------------ELLLPLEF-----PTFLLI 163
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 56/83 (67%)
Query: 181 PSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRK 240
PS+ +++ S + V+A KV G VK F V++GYGFI + ED+FVH IK NNPRK
Sbjct: 33 PSSLTSAASAGGDKKVIAAKVLGTVKGFKVRNGYGFINRNDTKEDIFVHQTAIKKNNPRK 92
Query: 241 LYKTLAEGETVEFDIMQGDKGNQ 263
+++ +GET EFD+++G+ G +
Sbjct: 93 YLRSVGDGETEEFDVVEGESGAE 115
>gi|313214830|emb|CBY41075.1| unnamed protein product [Oikopleura dioica]
gi|313231198|emb|CBY08313.1| unnamed protein product [Oikopleura dioica]
Length = 292
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 74/109 (67%)
Query: 8 TKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIK 67
T E P+ E+ ++ +++ + V G VKWF+V++GYGFI ++EDVFVH I
Sbjct: 15 TTQEVKPTIAHDEEAEIEDRIIICSGVTGSVKWFNVRNGYGFIHRDDTDEDVFVHQTAIV 74
Query: 68 YNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
NNP+K +++ +GE V FD+++G KG+EA NVTGPDG V+GS++A +
Sbjct: 75 KNNPKKFLRSVGDGEKVVFDVVEGQKGNEAANVTGPDGNPVEGSKYAPD 123
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 168 LQMCDSG----TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSN 223
+Q ++G T E P+ E+ ++ +++ + V G VKWF+V++GYGFI ++
Sbjct: 4 IQKTEAGDAPLTTQEVKPTIAHDEEAEIEDRIIICSGVTGSVKWFNVRNGYGFIHRDDTD 63
Query: 224 EDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
EDVFVH I NNP+K +++ +GE V FD+++G KGN+ V
Sbjct: 64 EDVFVHQTAIVKNNPKKFLRSVGDGEKVVFDVVEGQKGNEAANVT 108
>gi|56462192|gb|AAV91379.1| hypothetical protein 18 [Lonomia obliqua]
Length = 254
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 65/93 (69%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE V
Sbjct: 20 KQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEVV 79
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
EF ++ G+KG EA VTGP G V+GS +AA+K
Sbjct: 80 EFAVVAGEKGCEAAGVTGPGGEPVKGSPYAADK 112
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
K+ V+A KV G VKWF+VKSGYGFI + EDVFVH I NNPRK +++ +GE V
Sbjct: 20 KQKQVIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEVV 79
Query: 252 EFDIMQGDKG 261
EF ++ G+KG
Sbjct: 80 EFAVVAGEKG 89
>gi|402591201|gb|EJW85131.1| cold-shock DNA-binding domain-containing protein [Wuchereria
bancrofti]
Length = 270
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 65/89 (73%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 32 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
++G KG EA NVTGP+G +V+GS++A +K
Sbjct: 92 VEGQKGPEAANVTGPNGSNVEGSRYAVDK 120
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++A + G VKWF+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+
Sbjct: 32 IVARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDV 91
Query: 256 MQGDKGNQFCFV 267
++G KG + V
Sbjct: 92 VEGQKGPEAANV 103
>gi|14270383|emb|CAC39436.1| cold-shock domain protein [Oryzias latipes]
Length = 366
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 62/86 (72%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
T V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+++
Sbjct: 1 TAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEA 60
Query: 92 DKGHEAINVTGPDGRHVQGSQFAANK 117
KG EA NVTGP G V+GS++A NK
Sbjct: 61 AKGSEAANVTGPGGIPVKGSRYAPNK 86
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
T V G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE VEFD+++
Sbjct: 1 TAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEA 60
Query: 259 DKGNQFCFV 267
KG++ V
Sbjct: 61 AKGSEAANV 69
>gi|443702116|gb|ELU00277.1| hypothetical protein CAPTEDRAFT_48743, partial [Capitella teleta]
Length = 109
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 68/95 (71%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+++KV G VKWF+V+ GYGFI + EDVFVH I NNP K +++ +GE EFD+
Sbjct: 6 VISSKVTGAVKWFNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKEEFDV 65
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++ +KG++A NVTGP+G VQGS++AA++ + R
Sbjct: 66 VKAEKGNQAANVTGPEGESVQGSKYAADRRHFRPR 100
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+++KV G VKWF+V+ GYGFI + EDVFVH I NNP K +++ +GE EFD+
Sbjct: 6 VISSKVTGAVKWFNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKEEFDV 65
Query: 256 MQGDKGNQFCFV 267
++ +KGNQ V
Sbjct: 66 VKAEKGNQAANV 77
>gi|159162382|pdb|1H95|A Chain A, Solution Structure Of The Single-Stranded Dna-Binding Cold
Shock Domain (Csd) Of Human Y-Box Protein 1 (Yb1)
Determined By Nmr (10 Lowest Energy Structures)
Length = 79
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 4 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 63
Query: 89 MQGDKGHEAINVTGP 103
++G+KG EA NVTGP
Sbjct: 64 VEGEKGAEAANVTGP 78
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GETVEFD+
Sbjct: 4 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 63
Query: 256 MQGDKG 261
++G+KG
Sbjct: 64 VEGEKG 69
>gi|256089134|ref|XP_002580671.1| Y box binding protein [Schistosoma mansoni]
gi|350645802|emb|CCD59564.1| Y box binding protein, putative [Schistosoma mansoni]
Length = 167
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 APRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 APRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|226474410|emb|CAX71691.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 203
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|256089122|ref|XP_002580665.1| cold shock domain protein A [Schistosoma mansoni]
gi|350645796|emb|CCD59558.1| cold shock domain protein A, putative [Schistosoma mansoni]
Length = 175
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 65/90 (72%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP K+ ++L E E VEF +
Sbjct: 13 MTEDRVRGVVKWFNVKAGYGFITRSDTSSDIFVHQTAISRNNPGKMQRSLQENEEVEFFV 72
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
++GDKG EA +VTGPD R V+GS +AA++P
Sbjct: 73 VEGDKGVEASDVTGPDRRPVKGSAYAADRP 102
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP K+ ++L E E VEF +
Sbjct: 13 MTEDRVRGVVKWFNVKAGYGFITRSDTSSDIFVHQTAISRNNPGKMQRSLQENEEVEFFV 72
Query: 256 MQGDKG 261
++GDKG
Sbjct: 73 VEGDKG 78
>gi|256089136|ref|XP_002580672.1| Y box binding protein [Schistosoma mansoni]
gi|1477478|gb|AAC47760.1| Y-box binding protein [Schistosoma mansoni]
gi|1477484|gb|AAC47761.1| Y-box binding protein homolog [Schistosoma mansoni]
gi|350645803|emb|CCD59565.1| Y box binding protein, putative [Schistosoma mansoni]
Length = 217
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 APRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 APRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQFCFV 267
E VEF +++GDKG++ V
Sbjct: 74 EEVEFYVVEGDKGDEASEV 92
>gi|226475488|emb|CAX77797.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 214
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|226475490|emb|CAX77798.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 217
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|226475506|emb|CAX77806.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 217
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|226474412|emb|CAX71692.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226474414|emb|CAX71693.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226474416|emb|CAX71694.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226474420|emb|CAX71696.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226474426|emb|CAX71699.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226475492|emb|CAX77799.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226475494|emb|CAX77800.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226475496|emb|CAX77801.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226475500|emb|CAX77803.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226475508|emb|CAX77807.1| putative cold shock domain protein A [Schistosoma japonicum]
gi|226475510|emb|CAX77808.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 217
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|14150689|gb|AAK54601.1|AF373220_1 Y-box DNA-binding protein [Schistosoma japonicum]
gi|14039811|gb|AAK53394.1| Y-box binding protein [Schistosoma japonicum]
Length = 202
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|226475502|emb|CAX77804.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 217
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|226475498|emb|CAX77802.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 217
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQFCFV 267
E VEF +++GDKG++ V
Sbjct: 74 EEVEFYVVEGDKGDEASEV 92
>gi|226474418|emb|CAX71695.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 217
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|226474424|emb|CAX71698.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 203
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|226474422|emb|CAX71697.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 203
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|226475504|emb|CAX77805.1| putative cold shock domain protein A [Schistosoma japonicum]
Length = 203
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|56754985|gb|AAW25675.1| SJCHGC00971 protein [Schistosoma japonicum]
Length = 250
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%)
Query: 10 AEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYN 69
A+A ++ + V+ +V GVVKWF+VK+GYGFI ++ D+FVH I N
Sbjct: 2 ADARAADKDEQQKQNTPRKVMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRN 61
Query: 70 NPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPK 119
NP KL ++L EGE VEF +++GDKG EA VTGP G V+GS +AA + +
Sbjct: 62 NPEKLQRSLQEGEEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAALRGR 111
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 56/87 (64%)
Query: 177 AEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYN 236
A+A ++ + V+ +V GVVKWF+VK+GYGFI ++ D+FVH I N
Sbjct: 2 ADARAADKDEQQKQNTPRKVMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRN 61
Query: 237 NPRKLYKTLAEGETVEFDIMQGDKGNQ 263
NP KL ++L EGE VEF +++GDKG++
Sbjct: 62 NPEKLQRSLQEGEEVEFYVVEGDKGDE 88
>gi|256089138|ref|XP_002580673.1| Y box binding protein [Schistosoma mansoni]
gi|350645804|emb|CCD59566.1| Y box binding protein, putative [Schistosoma mansoni]
Length = 231
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 APRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
E VEF +++GDKG EA VTGP G V+GS +AA
Sbjct: 74 EEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAA 107
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 APRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|196007122|ref|XP_002113427.1| hypothetical protein TRIADDRAFT_64023 [Trichoplax adhaerens]
gi|190583831|gb|EDV23901.1| hypothetical protein TRIADDRAFT_64023 [Trichoplax adhaerens]
Length = 279
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++A KV G VKWF+VK GYGFI + EDVFVH I+ NNP+K +++ + E VEFD+
Sbjct: 24 LVANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDV 83
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFA 114
+ G KG EA NVTGP+G V+GS++A
Sbjct: 84 LSGPKGLEAANVTGPNGTAVKGSKYA 109
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 170 MCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 229
M ++ T+ N + S K+ ++A KV G VKWF+VK GYGFI + EDVFVH
Sbjct: 1 MANTATEQNIDAGNGNDSNEGKE---LVANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVH 57
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
I+ NNP+K +++ + E VEFD++ G KG
Sbjct: 58 QTAIQANNPKKYLRSVGDEEVVEFDVLSGPKG 89
>gi|340376350|ref|XP_003386696.1| PREDICTED: B box-binding protein-like [Amphimedon queenslandica]
Length = 277
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V + G VKWF+V+SGYGFI + +D+FVH I NNP+K +++ +GE VEF
Sbjct: 15 TVTTNIISGTVKWFNVRSGYGFIKRDDTGDDIFVHQTAIIKNNPKKYLRSVGDGEVVEFI 74
Query: 88 IMQGDKGHEAINVTGPDGRHVQGSQFAANKPKY 120
+++G KG EA VTGP+G HVQGS++A +K Y
Sbjct: 75 VIKGAKGPEAAQVTGPNGAHVQGSKYAPDKGDY 107
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V + G VKWF+V+SGYGFI + +D+FVH I NNP+K +++ +GE VEF
Sbjct: 15 TVTTNIISGTVKWFNVRSGYGFIKRDDTGDDIFVHQTAIIKNNPKKYLRSVGDGEVVEFI 74
Query: 255 IMQGDKGNQFCFVL 268
+++G KG + V
Sbjct: 75 VIKGAKGPEAAQVT 88
>gi|332233044|ref|XP_003265713.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein A, partial
[Nomascus leucogenys]
Length = 362
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD- 87
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE + F+
Sbjct: 74 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGENLNFEA 133
Query: 88 -IMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+ +G EA NVTGPDG V+GS++AA+
Sbjct: 134 VFLFSSQGAEAANVTGPDGVPVEGSRYAAD 163
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GE + F+
Sbjct: 74 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGENLNFEA 133
Query: 256 M 256
+
Sbjct: 134 V 134
>gi|56755411|gb|AAW25885.1| SJCHGC05173 protein [Schistosoma japonicum]
gi|226470954|emb|CAX76910.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226470956|emb|CAX76911.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226470958|emb|CAX76912.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226470960|emb|CAX76913.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226470962|emb|CAX76914.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226470964|emb|CAX76915.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226470966|emb|CAX76916.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226470968|emb|CAX76917.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226473230|emb|CAX71301.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226473232|emb|CAX71302.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226473234|emb|CAX71303.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226473236|emb|CAX71304.1| putative DNA-binding protein [Schistosoma japonicum]
gi|226473238|emb|CAX71305.1| putative DNA-binding protein [Schistosoma japonicum]
Length = 175
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 64/86 (74%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
+V GVVKWF+VK+GYGFI ++ D+FVH I NNP K+ ++L E E VEF +++GD
Sbjct: 17 RVRGVVKWFNVKAGYGFITRSDTSSDIFVHQTAISRNNPGKMQRSLQENEEVEFFVVEGD 76
Query: 93 KGHEAINVTGPDGRHVQGSQFAANKP 118
KG EA +VTGP+ R V+GS +AA++P
Sbjct: 77 KGVEASDVTGPERRPVKGSVYAADRP 102
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
+V GVVKWF+VK+GYGFI ++ D+FVH I NNP K+ ++L E E VEF +++GD
Sbjct: 17 RVRGVVKWFNVKAGYGFITRSDTSSDIFVHQTAISRNNPGKMQRSLQENEEVEFFVVEGD 76
Query: 260 KG 261
KG
Sbjct: 77 KG 78
>gi|444722480|gb|ELW63172.1| Nuclease-sensitive element-binding protein 1 [Tupaia chinensis]
Length = 273
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
VLA KV G VK F+V+ GYGFI + EDV VH IK NNPRK +++ +GET+EF
Sbjct: 125 VLARKVLGTVKCFNVRHGYGFINRNDTKEDVLVHQTAIKKNNPRKYLRSVGDGETMEFH- 183
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKY 120
+G+KG EA +VTGP G VQGS++AA+ Y
Sbjct: 184 AEGEKGAEAADVTGPGGAPVQGSKYAADHNHY 215
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
VLA KV G VK F+V+ GYGFI + EDV VH IK NNPRK +++ +GET+EF
Sbjct: 125 VLARKVLGTVKCFNVRHGYGFINRNDTKEDVLVHQTAIKKNNPRKYLRSVGDGETMEFH- 183
Query: 256 MQGDKGNQFCFV 267
+G+KG + V
Sbjct: 184 AEGEKGAEAADV 195
>gi|443685286|gb|ELT88944.1| hypothetical protein CAPTEDRAFT_48741, partial [Capitella teleta]
Length = 109
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 67/95 (70%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++++KV G VKWF+++ GYGFI T + EDVFVH K I NNP + +T+ +GE V+FD+
Sbjct: 6 IISSKVTGKVKWFNLRRGYGFINTNVTQEDVFVHHKAIVKNNPHQYLRTVGDGEKVDFDV 65
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++ + G+E NVT P+ VQGS++AA++ + R
Sbjct: 66 VKAEWGNEVANVTRPEEESVQGSKYAADRRHFRPR 100
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++++KV G VKWF+++ GYGFI T + EDVFVH K I NNP + +T+ +GE V+FD+
Sbjct: 6 IISSKVTGKVKWFNLRRGYGFINTNVTQEDVFVHHKAIVKNNPHQYLRTVGDGEKVDFDV 65
Query: 256 MQGDKGNQFCFVLK 269
++ + GN+ V +
Sbjct: 66 VKAEWGNEVANVTR 79
>gi|443733887|gb|ELU18084.1| hypothetical protein CAPTEDRAFT_40103, partial [Capitella teleta]
Length = 90
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 64/90 (71%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
++KV G KWF+V+ GYG I ++ EDVFVH I NNP K +++ +GE VEFD+++
Sbjct: 1 SSKVTGAAKWFNVRRGYGLINRDNTQEDVFVHHIAIVKNNPHKYLRSVGDGEKVEFDVVK 60
Query: 91 GDKGHEAINVTGPDGRHVQGSQFAANKPKY 120
+K ++A NVTGP+G VQGS++A+++ +
Sbjct: 61 TEKSNQAANVTGPEGESVQGSKYASDRRHF 90
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
++KV G KWF+V+ GYG I ++ EDVFVH I NNP K +++ +GE VEFD+++
Sbjct: 1 SSKVTGAAKWFNVRRGYGLINRDNTQEDVFVHHIAIVKNNPHKYLRSVGDGEKVEFDVVK 60
Query: 258 GDKGNQFCFV 267
+K NQ V
Sbjct: 61 TEKSNQAANV 70
>gi|443692620|gb|ELT94195.1| hypothetical protein CAPTEDRAFT_55545, partial [Capitella teleta]
Length = 149
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSS-NEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+++KV VKWF+V+ GYGFI ++ +DVFVH I NNP K +++ +GE +EFD
Sbjct: 24 VISSKVTRAVKWFNVRRGYGFINRDNTQGDDVFVHHTAIVKNNPHKYLRSVGDGEKMEFD 83
Query: 88 IMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
+M+ +KG++A NVTGP+ VQGS++AA++ + R
Sbjct: 84 VMKAEKGNQAANVTGPEKASVQGSKYAADRRHFRPR 119
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSS-NEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+++KV VKWF+V+ GYGFI ++ +DVFVH I NNP K +++ +GE +EFD
Sbjct: 24 VISSKVTRAVKWFNVRRGYGFINRDNTQGDDVFVHHTAIVKNNPHKYLRSVGDGEKMEFD 83
Query: 255 IMQGDKGNQFCFV 267
+M+ +KGNQ V
Sbjct: 84 VMKAEKGNQAANV 96
>gi|443706563|gb|ELU02551.1| hypothetical protein CAPTEDRAFT_58131, partial [Capitella teleta]
Length = 89
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 60/84 (71%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+++KV G KWF+++ GYGFI + EDVFVH I N+P K +++ +GE VEFD+
Sbjct: 6 VISSKVTGAAKWFNMRRGYGFINRDDTQEDVFVHHTAIVKNDPHKYLRSIGDGEKVEFDV 65
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQ 112
M+ +K ++A NVTGP+G VQGS+
Sbjct: 66 MKTEKSNQAANVTGPEGEPVQGSK 89
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+++KV G KWF+++ GYGFI + EDVFVH I N+P K +++ +GE VEFD+
Sbjct: 6 VISSKVTGAAKWFNMRRGYGFINRDDTQEDVFVHHTAIVKNDPHKYLRSIGDGEKVEFDV 65
Query: 256 MQGDKGNQFCFV 267
M+ +K NQ V
Sbjct: 66 MKTEKSNQAANV 77
>gi|5441543|emb|CAB46826.1| DNA binding protein [Canis lupus familiaris]
Length = 96
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 59/75 (78%)
Query: 42 SVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVT 101
+V++GYGFI + EDVFVH IK NNPRK +++ +GETV+FD+++G+KG EA NVT
Sbjct: 1 NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVQFDVVEGEKGAEAANVT 60
Query: 102 GPDGRHVQGSQFAAN 116
GPDG V+GS++AA+
Sbjct: 61 GPDGVPVEGSRYAAD 75
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 209 SVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
+V++GYGFI + EDVFVH IK NNPRK +++ +GETV+FD+++G+KG + V
Sbjct: 1 NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVQFDVVEGEKGAEAANV 59
>gi|443701121|gb|ELT99730.1| hypothetical protein CAPTEDRAFT_50229, partial [Capitella teleta]
Length = 103
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 63/92 (68%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+KV G VKWF+++ GYGFI T + ED FVH K I NNP + +++ +GE VEFD+++
Sbjct: 3 SKVTGEVKWFNLRRGYGFINTNDTQEDAFVHHKAIVKNNPHQFLRSVGDGEKVEFDVVKA 62
Query: 92 DKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
+ G+E NVT P+ VQGS++AA++ + R
Sbjct: 63 EWGNEVANVTRPEEESVQGSKYAADRRHFRPR 94
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+KV G VKWF+++ GYGFI T + ED FVH K I NNP + +++ +GE VEFD+++
Sbjct: 3 SKVTGEVKWFNLRRGYGFINTNDTQEDAFVHHKAIVKNNPHQFLRSVGDGEKVEFDVVKA 62
Query: 259 DKGNQFCFVLK 269
+ GN+ V +
Sbjct: 63 EWGNEVANVTR 73
>gi|294884847|gb|ADF47434.1| cold shock domain-containing protein A, partial [Dugesia japonica]
Length = 190
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 85
E VL KV G VKW++VK GYGFI +EDVFVH I P K K+L E E V
Sbjct: 7 EKEVLVHKVTGKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQ-KSLGEDEDVL 65
Query: 86 FDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
FD+++G KG+EA+NVTGP+G V GS+FA N
Sbjct: 66 FDVVKGSKGNEAMNVTGPNGDAVLGSKFAPN 96
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 252
E VL KV G VKW++VK GYGFI +EDVFVH I P K K+L E E V
Sbjct: 7 EKEVLVHKVTGKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQ-KSLGEDEDVL 65
Query: 253 FDIMQGDKGNQFCFVL---KNIVLYFSFVPQS 281
FD+++G KGN+ V + VL F P +
Sbjct: 66 FDVVKGSKGNEAMNVTGPNGDAVLGSKFAPNN 97
>gi|312092494|ref|XP_003147356.1| cold-shock DNA-binding domain-containing protein [Loa loa]
Length = 227
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 58/77 (75%)
Query: 41 FSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINV 100
F+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+++G KG EA NV
Sbjct: 1 FNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQKGPEAANV 60
Query: 101 TGPDGRHVQGSQFAANK 117
TGP+G +V+GS++AA+K
Sbjct: 61 TGPNGGNVEGSRYAADK 77
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 208 FSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
F+VK+GYGFI + +D+FVH + NNP K ++L +GE VEFD+++G KG + V
Sbjct: 1 FNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQKGPEAANV 60
>gi|71679965|gb|AAI00455.1| Ybx2 protein [Mus musculus]
Length = 171
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 172 DSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 231
+ T A TP+ P+ S++ K VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 69 NQATAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 125
Query: 232 RIKYNNPRKLYKTLAEGETVEFDIMQG 258
IK NNPRK +++ +GETVEFD+++G
Sbjct: 126 AIKRNNPRKFLRSVGDGETVEFDVVEG 152
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 5 DSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSK 64
+ T A TP+ P+ +++ K VLA +V G VKWF+V++GYGFI + EDVFVH
Sbjct: 69 NQATAASGTPAPPARSQADKP---VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT 125
Query: 65 RIKYNNPRKLYKTLAEGETVEFDIMQG 91
IK NNPRK +++ +GETVEFD+++G
Sbjct: 126 AIKRNNPRKFLRSVGDGETVEFDVVEG 152
>gi|358254912|dbj|GAA56562.1| DNA-binding protein A [Clonorchis sinensis]
Length = 270
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 5/100 (5%)
Query: 12 ATPSNPSAN--ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYN 69
A+P + A+ SP+K ++ +V G VKWF+VKSGYGFI ++ D+FVH I
Sbjct: 5 ASPESDKAHGKASPRK---LVEQRVRGEVKWFNVKSGYGFIHRQDTDTDIFVHQSAIARK 61
Query: 70 NPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQ 109
NP +L ++L EGE VEF +++G+KG EA VTGPDG VQ
Sbjct: 62 NPDQLQRSLKEGEEVEFYVVEGEKGDEAYEVTGPDGAPVQ 101
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
SP+K ++ +V G VKWF+VKSGYGFI ++ D+FVH I NP +L ++L EG
Sbjct: 17 SPRK---LVEQRVRGEVKWFNVKSGYGFIHRQDTDTDIFVHQSAIARKNPDQLQRSLKEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++G+KG++
Sbjct: 74 EEVEFYVVEGEKGDE 88
>gi|56754487|gb|AAW25431.1| unknown [Schistosoma japonicum]
Length = 104
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 82 ETVEFDIMQGDKGHEAIN-VTGPDGRHVQ 109
E VEF +++GDKG EA +TGP G V+
Sbjct: 74 EEVEFYVVEGDKGDEASGEMTGPGGEPVK 102
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+P+K V+ +V GVVKWF+VK+GYGFI ++ D+FVH I NNP KL ++L EG
Sbjct: 17 TPRK---VMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEG 73
Query: 249 ETVEFDIMQGDKGNQ 263
E VEF +++GDKG++
Sbjct: 74 EEVEFYVVEGDKGDE 88
>gi|1483311|emb|CAA68079.1| Y-box protein [Dugesia japonica]
Length = 266
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 3 MCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 62
M ++ K + N +A+ S +K+ +L T + G VKWF+VK GYGF+ + ED+F+H
Sbjct: 1 MANNQEKTDEYEGN-AADSSKQKQ--LLHTGITGKVKWFNVKRGYGFVCRNDNQEDIFIH 57
Query: 63 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
I +NP K++ EGE + FDI++G KG+EA NV+ DG+ V+GS++A
Sbjct: 58 QSAIVKSNPDHPRKSVGEGEEILFDIVKGAKGNEAANVSAIDGKCVKGSEYA 109
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 170 MCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 229
M ++ K + N + S K+ +L T + G VKWF+VK GYGF+ + ED+F+H
Sbjct: 1 MANNQEKTDEYEGNAADSSKQKQ---LLHTGITGKVKWFNVKRGYGFVCRNDNQEDIFIH 57
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQ 263
I +NP K++ EGE + FDI++G KGN+
Sbjct: 58 QSAIVKSNPDHPRKSVGEGEEILFDIVKGAKGNE 91
>gi|345482606|ref|XP_001607820.2| PREDICTED: hypothetical protein LOC100124010 [Nasonia vitripennis]
Length = 318
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 24/118 (20%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++A KV G VKWF+VKSGYGFI N K +++ +GE VEFD+
Sbjct: 64 IIANKVTGTVKWFNVKSGYGFI-------------------NRSKAVRSVGDGEVVEFDV 104
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPK-----YNRRKAKANKRKRKSRRNNRLF 141
+ G+KG+EA NVTGPDG V+GS +AA+K + YNRR + R+ R +
Sbjct: 105 VIGEKGNEAANVTGPDGEAVKGSPYAADKRRGYRQYYNRRGGSGARPMRRPREGQEGY 162
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 19/73 (26%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++A KV G VKWF+VKSGYGFI N K +++ +GE VEFD+
Sbjct: 64 IIANKVTGTVKWFNVKSGYGFI-------------------NRSKAVRSVGDGEVVEFDV 104
Query: 256 MQGDKGNQFCFVL 268
+ G+KGN+ V
Sbjct: 105 VIGEKGNEAANVT 117
>gi|443706483|gb|ELU02509.1| hypothetical protein CAPTEDRAFT_105284, partial [Capitella teleta]
Length = 100
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 59/83 (71%)
Query: 41 FSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINV 100
F+V+ GYGFI + EDVFVH I NNP K +++ +GE VEFD+++ +KG++A NV
Sbjct: 1 FNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKVEFDVVKAEKGNQAANV 60
Query: 101 TGPDGRHVQGSQFAANKPKYNRR 123
TGP+G VQGS++AA++ + R
Sbjct: 61 TGPEGESVQGSKYAADRRHFRPR 83
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 208 FSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQ 263
F+V+ GYGFI + EDVFVH I NNP K +++ +GE VEFD+++ +KGNQ
Sbjct: 1 FNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKVEFDVVKAEKGNQ 56
>gi|431919185|gb|ELK17890.1| DNA-binding protein A [Pteropus alecto]
Length = 191
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 56/87 (64%)
Query: 11 EATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 70
+A P A S EP V++ ++ G VKWF+VK GYGFI ++ DVFVH I NN
Sbjct: 48 DAAPKAAEATGSDGAEPKVISRRMTGTVKWFNVKEGYGFIKRSDTHGDVFVHQSAISRNN 107
Query: 71 PRKLYKTLAEGETVEFDIMQGDKGHEA 97
P K +++ EGETVEFD++Q ++G EA
Sbjct: 108 PLKYQRSVGEGETVEFDLVQSERGAEA 134
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 56/86 (65%)
Query: 178 EATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 237
+A P A+ S EP V++ ++ G VKWF+VK GYGFI ++ DVFVH I NN
Sbjct: 48 DAAPKAAEATGSDGAEPKVISRRMTGTVKWFNVKEGYGFIKRSDTHGDVFVHQSAISRNN 107
Query: 238 PRKLYKTLAEGETVEFDIMQGDKGNQ 263
P K +++ EGETVEFD++Q ++G +
Sbjct: 108 PLKYQRSVGEGETVEFDLVQSERGAE 133
>gi|296470652|tpg|DAA12767.1| TPA: cold shock domain protein A short-like [Bos taurus]
Length = 323
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 82
PKK V++ +V G V WF K GYGFI+ + EDVFVH I NP ++ +GE
Sbjct: 60 PKK---VISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGE 116
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANK 117
VEFD++QG+ G EA NVTGP G ++GS++ A++
Sbjct: 117 MVEFDVVQGEWGTEAANVTGPAGAPLKGSRYTAHR 151
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGE 249
PKK V++ +V G V WF K GYGFI+ + EDVFVH I NP ++ +GE
Sbjct: 60 PKK---VISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGE 116
Query: 250 TVEFDIMQGDKGNQFCFV 267
VEFD++QG+ G + V
Sbjct: 117 MVEFDVVQGEWGTEAANV 134
>gi|386783739|gb|AFJ24764.1| Y box protein-1, partial [Schmidtea mediterranea]
Length = 191
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSN--EDVFVHSKRIKYNNPRKLYKTLAEGETVE 85
++ A++V G VKWFS K+GYGFI+ N +D+FVH I NN +LA+GE V
Sbjct: 17 IMTASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNA----TSLADGEEVL 72
Query: 86 FDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKS 134
FDI+QG KG EA NVTGP+G V G + + N R + N R + S
Sbjct: 73 FDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNRGDRDNYRNQSS 121
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSN--EDVFVHSKRIKYNNPRKLYKTLAEGETVE 252
++ A++V G VKWFS K+GYGFI+ N +D+FVH I NN +LA+GE V
Sbjct: 17 IMTASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNA----TSLADGEEVL 72
Query: 253 FDIMQGDKG 261
FDI+QG KG
Sbjct: 73 FDIVQGAKG 81
>gi|296470657|tpg|DAA12772.1| TPA: cold shock domain protein A short-like [Bos taurus]
Length = 370
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 20 NESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLA 79
++PKK V+A +V G V WF K GYGFI + EDVFVH I P K ++
Sbjct: 57 GKAPKK---VIAKRVLGTVVWFKDKKGYGFIRRHDTQEDVFVHHTAITGETPCKYRGSVD 113
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+GETVEFD++QG++G EA VTGP G ++GS + A+
Sbjct: 114 DGETVEFDVVQGERGTEAAKVTGPAGVPLKGSCYTAH 150
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAE 247
++PKK V+A +V G V WF K GYGFI + EDVFVH I P K ++ +
Sbjct: 58 KAPKK---VIAKRVLGTVVWFKDKKGYGFIRRHDTQEDVFVHHTAITGETPCKYRGSVDD 114
Query: 248 GETVEFDIMQGDKGNQFCFV 267
GETVEFD++QG++G + V
Sbjct: 115 GETVEFDVVQGERGTEAAKV 134
>gi|440909978|gb|ELR59822.1| Nuclease-sensitive element-binding protein 1, partial [Bos
grunniens mutus]
Length = 283
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 56/88 (63%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+A +V G V WF K GYGFI + EDVFVH I P K ++ +GETVEFD+
Sbjct: 3 VIAKRVLGTVVWFKDKKGYGFIRRHDTQEDVFVHHTAITGETPCKYRGSVDDGETVEFDV 62
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAAN 116
+QG++G EA VTGP G ++GS + A+
Sbjct: 63 VQGERGTEAAKVTGPAGVPLKGSCYTAH 90
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+A +V G V WF K GYGFI + EDVFVH I P K ++ +GETVEFD+
Sbjct: 3 VIAKRVLGTVVWFKDKKGYGFIRRHDTQEDVFVHHTAITGETPCKYRGSVDDGETVEFDV 62
Query: 256 MQGDKGNQFCFV 267
+QG++G + V
Sbjct: 63 VQGERGTEAAKV 74
>gi|268562898|ref|XP_002638697.1| Hypothetical protein CBG11894 [Caenorhabditis briggsae]
Length = 258
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K VL+T + G VKW+SV YGFI+ +DVFVH I +N K Y +TLA
Sbjct: 48 EEEQKAKRVLSTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSNTEKFYLRTLA 107
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQF 113
+ E + FD+++G G EA NVTGPDG +V GS++
Sbjct: 108 DEEDIVFDLVEGKNGPEAANVTGPDGGNVAGSRY 141
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K VL+T + G VKW+SV YGFI+ +DVFVH I +N K Y +TLA
Sbjct: 48 EEEQKAKRVLSTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSNTEKFYLRTLA 107
Query: 247 EGETVEFDIMQGDKGNQFCFV 267
+ E + FD+++G G + V
Sbjct: 108 DEEDIVFDLVEGKNGPEAANV 128
>gi|308497192|ref|XP_003110783.1| CRE-CEY-4 protein [Caenorhabditis remanei]
gi|308242663|gb|EFO86615.1| CRE-CEY-4 protein [Caenorhabditis remanei]
Length = 289
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSN-EDVFVHSKRIKYNNPRKLY-KTLAEGETVEF 86
VL V G+VKWFSV+ YGF+A S ED FVH I ++ K Y +TL + E V F
Sbjct: 89 VLEKGVNGIVKWFSVRGRYGFVARASDEKEDFFVHQTAIAKSSTIKYYLRTLDDEEPVVF 148
Query: 87 DIMQGDKGHEAINVTGPDGRHVQGSQFA 114
DI++G KG EA NVTGPDG +V+GS++A
Sbjct: 149 DIVEGRKGPEAANVTGPDGENVRGSRYA 176
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSN-EDVFVHSKRIKYNNPRKLY-KTLAEGETVEF 253
VL V G+VKWFSV+ YGF+A S ED FVH I ++ K Y +TL + E V F
Sbjct: 89 VLEKGVNGIVKWFSVRGRYGFVARASDEKEDFFVHQTAIAKSSTIKYYLRTLDDEEPVVF 148
Query: 254 DIMQGDKGNQFCFV 267
DI++G KG + V
Sbjct: 149 DIVEGRKGPEAANV 162
>gi|350586335|ref|XP_003356548.2| PREDICTED: nuclease-sensitive element-binding protein 1-like [Sus
scrofa]
Length = 377
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
C ++ F+V Y + EDVFVH IK NNPRK +++ +GETVEFD+++G+KG
Sbjct: 117 CSILTVFTVVVSYRN----DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKG 172
Query: 95 HEAINVTGPDGRHVQGSQFAAN 116
EA NVTGP G VQGS++AA+
Sbjct: 173 AEAANVTGPGGVPVQGSKYAAD 194
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
C ++ F+V Y + EDVFVH IK NNPRK +++ +GETVEFD+++G+KG
Sbjct: 117 CSILTVFTVVVSYRN----DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKG 172
Query: 262 NQFCFV 267
+ V
Sbjct: 173 AEAANV 178
>gi|281347702|gb|EFB23286.1| hypothetical protein PANDA_020808 [Ailuropoda melanoleuca]
Length = 341
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 7/90 (7%)
Query: 27 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 86
PVV T V + +SG G + EDVFVH IK NNPRK +++ +GETVEF
Sbjct: 62 PVVANTSVQ---RGKERRSGRGN----DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 114
Query: 87 DIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
D+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 115 DVVEGEKGAEAANVTGPDGVPVEGSRYAAD 144
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 194 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 253
PVV T V + +SG G + EDVFVH IK NNPRK +++ +GETVEF
Sbjct: 62 PVVANTSVQ---RGKERRSGRGN----DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 114
Query: 254 DIMQGDKGNQFCFV 267
D+++G+KG + V
Sbjct: 115 DVVEGEKGAEAANV 128
>gi|17555742|ref|NP_499393.1| Protein CEY-4 [Caenorhabditis elegans]
gi|3880813|emb|CAA19509.1| Protein CEY-4 [Caenorhabditis elegans]
Length = 294
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATP---SSNEDVFVHSKRIKYNNPRKLY-KTLAEGETV 84
V+ T V G VKWFSV+ YGF+A NED FVH I ++ K Y +TL + E V
Sbjct: 84 VIETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPV 143
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
FDI++G KG EA NVTGPDG +V+GS+FA
Sbjct: 144 VFDIVEGLKGPEAANVTGPDGENVRGSRFA 173
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATP---SSNEDVFVHSKRIKYNNPRKLY-KTLAEGETV 251
V+ T V G VKWFSV+ YGF+A NED FVH I ++ K Y +TL + E V
Sbjct: 84 VIETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPV 143
Query: 252 EFDIMQGDKGNQFCFV 267
FDI++G KG + V
Sbjct: 144 VFDIVEGLKGPEAANV 159
>gi|268574654|ref|XP_002642306.1| C. briggsae CBR-CEY-4 protein [Caenorhabditis briggsae]
Length = 286
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIA---TPSSNEDVFVHSKRIKYNNPRKLY-KTLAEGETV 84
VL V G VKWFSV+ YGF+A ED FVH I ++ K Y +TL E E V
Sbjct: 84 VLEKGVKGYVKWFSVRGRYGFVAREKAADETEDFFVHQTAISKSSTIKYYLRTLEEDEPV 143
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
FDI++G KG EA NVTGPDG +V+GS+FA
Sbjct: 144 VFDIVEGRKGPEAANVTGPDGENVRGSRFA 173
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIA---TPSSNEDVFVHSKRIKYNNPRKLY-KTLAEGETV 251
VL V G VKWFSV+ YGF+A ED FVH I ++ K Y +TL E E V
Sbjct: 84 VLEKGVKGYVKWFSVRGRYGFVAREKAADETEDFFVHQTAISKSSTIKYYLRTLEEDEPV 143
Query: 252 EFDIMQGDKGNQFCFV 267
FDI++G KG + V
Sbjct: 144 VFDIVEGRKGPEAANV 159
>gi|351704597|gb|EHB07516.1| DNA-binding protein A [Heterocephalus glaber]
Length = 444
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 55 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGPDG V+GS++A
Sbjct: 18 TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYA 77
Query: 115 AN 116
A+
Sbjct: 78 AD 79
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 222 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 18 TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANV 63
>gi|146197784|dbj|BAF57611.1| Y-Box factor protein [Dugesia japonica]
Length = 178
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKW++VK GYGFI +EDVFVH I P K K+L E E V FD+++G KG+
Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQ-KSLGEDEDVLFDVVKGSKGN 63
Query: 96 EAINVTGPDGRHVQGSQFAAN 116
EA+NVTGP+G V GS+FA N
Sbjct: 64 EAMNVTGPNGDAVLGSKFAPN 84
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKW++VK GYGFI +EDVFVH I P K K+L E E V FD+++G KGN
Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQ-KSLGEDEDVLFDVVKGSKGN 63
Query: 263 QFCFVL---KNIVLYFSFVPQS 281
+ V + VL F P +
Sbjct: 64 EAMNVTGPNGDAVLGSKFAPNN 85
>gi|431917564|gb|ELK16881.1| Tyrosine-protein kinase STYK1 [Pteropus alecto]
Length = 807
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 55 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGPDG V+GS++A
Sbjct: 82 TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYA 141
Query: 115 AN 116
A+
Sbjct: 142 AD 143
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 222 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQ 263
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG +
Sbjct: 82 TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAE 123
>gi|268564326|ref|XP_002639074.1| C. briggsae CBR-CEY-2 protein [Caenorhabditis briggsae]
Length = 256
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K VL+T + G VKW+SV YGFI+ +D+FVH I ++ K Y +TLA
Sbjct: 48 EEEQKAKRVLSTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSDTEKFYLRTLA 107
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQF 113
+ E + FD+++G G EA NVTGPDG +V GS++
Sbjct: 108 DEEDIVFDLVEGKNGPEAANVTGPDGGNVTGSRY 141
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K VL+T + G VKW+SV YGFI+ +D+FVH I ++ K Y +TLA
Sbjct: 48 EEEQKAKRVLSTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSDTEKFYLRTLA 107
Query: 247 EGETVEFDIMQGDKGNQFCFV 267
+ E + FD+++G G + V
Sbjct: 108 DEEDIVFDLVEGKNGPEAANV 128
>gi|312083329|ref|XP_003143816.1| hypothetical protein LOAG_08235 [Loa loa]
gi|307761020|gb|EFO20254.1| hypothetical protein LOAG_08235 [Loa loa]
Length = 310
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 10/122 (8%)
Query: 24 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLAEGE 82
KK+P+ L V G VKW+SV+ YGFIA DVFVH I + K Y +TL +GE
Sbjct: 67 KKKPI-LEKGVKGRVKWYSVRFHYGFIARDDKGNDVFVHQTAITKSRIIKYYLRTLGDGE 125
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGS-----QFAA--NKPKYNRRKAKANKRKRKSR 135
V FDI++G +G EA NVTGP+G V+GS QF++ ++ YNR ++ A++ K R
Sbjct: 126 EVLFDIVEGKQGPEAANVTGPNGAEVRGSKYHNFQFSSFRHRMAYNRERS-AHQENEKYR 184
Query: 136 RN 137
R+
Sbjct: 185 RD 186
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 191 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLAEGE 249
KK+P+ L V G VKW+SV+ YGFIA DVFVH I + K Y +TL +GE
Sbjct: 67 KKKPI-LEKGVKGRVKWYSVRFHYGFIARDDKGNDVFVHQTAITKSRIIKYYLRTLGDGE 125
Query: 250 TVEFDIMQGDKG 261
V FDI++G +G
Sbjct: 126 EVLFDIVEGKQG 137
>gi|291394305|ref|XP_002713505.1| PREDICTED: DNA-binding protein B-like [Oryctolagus cuniculus]
Length = 301
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 49 FIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHV 108
FI + EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V
Sbjct: 51 FINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPV 110
Query: 109 QGSQFAAN 116
QGS++AA+
Sbjct: 111 QGSKYAAD 118
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 216 FIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
FI + EDVFVH IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 51 FINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANV 102
>gi|380807783|gb|AFE75767.1| DNA-binding protein A isoform b, partial [Macaca mulatta]
Length = 79
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 57 EDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA+
Sbjct: 1 EDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 60
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 224 EDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
EDVFVH IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 1 EDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANV 44
>gi|341878779|gb|EGT34714.1| CBN-CEY-4 protein [Caenorhabditis brenneri]
Length = 288
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSN---EDVFVHSKRIKYNNPRKLY-KTLAEGETV 84
VL V G VKWFSV+ YGF+A ++ ED FVH I ++ K Y +TL + E V
Sbjct: 88 VLEKGVKGYVKWFSVRGRYGFVAREKASDEKEDFFVHQTAIAKSSTIKYYLRTLDDDEPV 147
Query: 85 EFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
FDI++G KG EA NVTGPDG +V+GS+FA
Sbjct: 148 VFDIVEGRKGPEAANVTGPDGENVRGSRFA 177
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSN---EDVFVHSKRIKYNNPRKLY-KTLAEGETV 251
VL V G VKWFSV+ YGF+A ++ ED FVH I ++ K Y +TL + E V
Sbjct: 88 VLEKGVKGYVKWFSVRGRYGFVAREKASDEKEDFFVHQTAIAKSSTIKYYLRTLDDDEPV 147
Query: 252 EFDIMQGDKGNQFCFV 267
FDI++G KG + V
Sbjct: 148 VFDIVEGRKGPEAANV 163
>gi|395526735|ref|XP_003765512.1| PREDICTED: nuclease-sensitive element-binding protein 1
[Sarcophilus harrisii]
Length = 273
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 48/60 (80%)
Query: 57 EDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 31 EDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 90
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 224 EDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
EDVFVH IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 31 EDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 75
>gi|444721373|gb|ELW62110.1| Nuclease-sensitive element-binding protein 1 [Tupaia chinensis]
Length = 678
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 54 SSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQF 113
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G VQGS++
Sbjct: 433 DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKY 492
Query: 114 AAN 116
AA+
Sbjct: 493 AAD 495
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 221 SSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 433 DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANV 479
>gi|432104501|gb|ELK31119.1| Nuclease-sensitive element-binding protein 1, partial [Myotis
davidii]
Length = 248
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 48/60 (80%)
Query: 57 EDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 6 EDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 65
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 224 EDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
EDVFVH IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 6 EDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 50
>gi|355729516|gb|AES09893.1| Y box binding protein 2 [Mustela putorius furo]
Length = 242
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 48/62 (77%)
Query: 55 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A
Sbjct: 1 TKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 60
Query: 115 AN 116
N
Sbjct: 61 PN 62
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 222 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 1 TKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 47
>gi|443724408|gb|ELU12428.1| hypothetical protein CAPTEDRAFT_201202 [Capitella teleta]
Length = 461
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 178 EATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 237
E+ PS P + K V+++KV GVVKWF+V+ GYGFI EDVFVH I NN
Sbjct: 335 ESAPSRPMGEVTKK----VISSKVTGVVKWFNVRRGYGFINRDDMQEDVFVHHTAIVKNN 390
Query: 238 PRKLYKTLAEGETVEFDIMQGDKGNQ 263
P K +++ +GE VEFD+++ +K +
Sbjct: 391 PHKYLRSVGDGEKVEFDVVKAEKATK 416
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 11 EATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 70
E+ PS P + K V+++KV GVVKWF+V+ GYGFI EDVFVH I NN
Sbjct: 335 ESAPSRPMGEVTKK----VISSKVTGVVKWFNVRRGYGFINRDDMQEDVFVHHTAIVKNN 390
Query: 71 PRKLYKTLAEGETVEFDIMQGDKG 94
P K +++ +GE VEFD+++ +K
Sbjct: 391 PHKYLRSVGDGEKVEFDVVKAEKA 414
>gi|351701552|gb|EHB04471.1| Y-box-binding protein 2 [Heterocephalus glaber]
Length = 266
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 48/62 (77%)
Query: 55 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A
Sbjct: 24 TKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYA 83
Query: 115 AN 116
N
Sbjct: 84 PN 85
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 222 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 24 TKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 70
>gi|17508335|ref|NP_491631.1| Protein CEY-3 [Caenorhabditis elegans]
gi|373254431|emb|CCD71344.1| Protein CEY-3 [Caenorhabditis elegans]
Length = 265
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K +VL + G VKW+SV YGFI+ +DVFVH I ++ K Y +TLA
Sbjct: 51 EEEQKAKIVLTAGLQGKVKWYSVLRRYGFISRSDGEKDVFVHQTAISKSDTEKFYLRTLA 110
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQF 113
+ E V FD++ G G EA NVTGP G +V GS++
Sbjct: 111 DEEEVLFDLVDGKNGPEAANVTGPAGVNVSGSKY 144
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K +VL + G VKW+SV YGFI+ +DVFVH I ++ K Y +TLA
Sbjct: 51 EEEQKAKIVLTAGLQGKVKWYSVLRRYGFISRSDGEKDVFVHQTAISKSDTEKFYLRTLA 110
Query: 247 EGETVEFDIMQGDKG 261
+ E V FD++ G G
Sbjct: 111 DEEEVLFDLVDGKNG 125
>gi|308498439|ref|XP_003111406.1| hypothetical protein CRE_03641 [Caenorhabditis remanei]
gi|308240954|gb|EFO84906.1| hypothetical protein CRE_03641 [Caenorhabditis remanei]
Length = 264
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K VL T + G VKW+SV YGFI+ +DVFVH I ++ K Y +TLA
Sbjct: 49 EEEQKAKRVLTTGLQGKVKWYSVLRRYGFISRDDGEKDVFVHQTAIAKSDTEKFYLRTLA 108
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQF 113
+ E V FD+++G G EA NV+GP G +V GS++
Sbjct: 109 DEEEVLFDLVEGKNGPEAANVSGPAGENVVGSRY 142
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K VL T + G VKW+SV YGFI+ +DVFVH I ++ K Y +TLA
Sbjct: 49 EEEQKAKRVLTTGLQGKVKWYSVLRRYGFISRDDGEKDVFVHQTAIAKSDTEKFYLRTLA 108
Query: 247 EGETVEFDIMQGDKGNQFCFV 267
+ E V FD+++G G + V
Sbjct: 109 DEEEVLFDLVEGKNGPEAANV 129
>gi|431922579|gb|ELK19522.1| Prefoldin subunit 6-like protein [Pteropus alecto]
Length = 896
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/62 (59%), Positives = 49/62 (79%)
Query: 55 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G VQGS++A
Sbjct: 652 TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYA 711
Query: 115 AN 116
A+
Sbjct: 712 AD 713
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 222 SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQ 263
+ EDVFVH IK NNPRK +++ +GETVEFD+++G+KG +
Sbjct: 652 TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAE 693
>gi|297735007|emb|CBI17369.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
GVV+WFS + G+GFI ED+FVH IK + +++L EGETVEF I+ G+ G
Sbjct: 7 TGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDG----FRSLGEGETVEFQIVLGEDG 62
Query: 95 H-EAINVTGPDGRHVQGSQ 112
+A++VTGPDG VQGS+
Sbjct: 63 RTKAVDVTGPDGSSVQGSK 81
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
GVV+WFS + G+GFI ED+FVH IK + +++L EGETVEF I+ G+ G
Sbjct: 7 TGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDG----FRSLGEGETVEFQIVLGEDG 62
>gi|268566689|ref|XP_002639788.1| Hypothetical protein CBG02238 [Caenorhabditis briggsae]
Length = 263
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K VL+T + G VKW+SV YGFI+ +DVFVH I + K Y +TL
Sbjct: 48 EEEQKTKRVLSTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSLTEKFYLRTLG 107
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQF 113
+ E V FD++ G G EA NVTGPDG +V GS++
Sbjct: 108 DEEEVLFDLVDGKNGPEAANVTGPDGGNVVGSRY 141
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K VL+T + G VKW+SV YGFI+ +DVFVH I + K Y +TL
Sbjct: 48 EEEQKTKRVLSTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSLTEKFYLRTLG 107
Query: 247 EGETVEFDIMQGDKGNQFCFV 267
+ E V FD++ G G + V
Sbjct: 108 DEEEVLFDLVDGKNGPEAANV 128
>gi|324518130|gb|ADY47012.1| Y-box-binding protein 2-B [Ascaris suum]
Length = 323
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSN-EDVFVHSKRIKYNNPRKLY-KTLAEGETVEF 86
++ V G VKW+SV+ YGFIA DVFVH I + K Y +TL +GE V F
Sbjct: 42 LIEKGVTGKVKWYSVRYHYGFIARDDDRANDVFVHQTAIAKSRIVKYYLRTLGDGEEVVF 101
Query: 87 DIMQGDKGHEAINVTGPDGRHVQGSQFA 114
DI++G +G EA NVTGPDG V+GS+FA
Sbjct: 102 DIVEGKQGPEAANVTGPDGAPVRGSRFA 129
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSN-EDVFVHSKRIKYNNPRKLY-KTLAEGETVEF 253
++ V G VKW+SV+ YGFIA DVFVH I + K Y +TL +GE V F
Sbjct: 42 LIEKGVTGKVKWYSVRYHYGFIARDDDRANDVFVHQTAIAKSRIVKYYLRTLGDGEEVVF 101
Query: 254 DIMQGDKGNQFCFV 267
DI++G +G + V
Sbjct: 102 DIVEGKQGPEAANV 115
>gi|170572609|ref|XP_001892171.1| 'Cold-shock' DNA-binding domain containing protein [Brugia malayi]
gi|158602705|gb|EDP39010.1| 'Cold-shock' DNA-binding domain containing protein [Brugia malayi]
Length = 244
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 10/115 (8%)
Query: 34 VCGVVKWFSVKSGYGFIATPSS-NEDVFVHSKRIKYNNPRKLY-KTLAEGETVEFDIMQG 91
V G VKW+SV+ YGFIA + DVFVH I + K Y +TL +GE V FDI+QG
Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65
Query: 92 DKGHEAINVTGPDGRHVQGSQFA-------ANKPKYNRRKAKANKRKRKSRRNNR 139
+G EA NVTGP+ V+GS++ + YNR + A+K K RRNN+
Sbjct: 66 KQGPEAANVTGPNSTEVRGSKYHNFQFYTFRRRMAYNRERV-AHKESEKYRRNNQ 119
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 201 VCGVVKWFSVKSGYGFIATPSS-NEDVFVHSKRIKYNNPRKLY-KTLAEGETVEFDIMQG 258
V G VKW+SV+ YGFIA + DVFVH I + K Y +TL +GE V FDI+QG
Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65
Query: 259 DKG 261
+G
Sbjct: 66 KQG 68
>gi|322802596|gb|EFZ22889.1| hypothetical protein SINV_03993 [Solenopsis invicta]
Length = 331
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 57 EDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
EDVFVH I NNPRK +++ +GE VEFD++ G+KGHEA NVTGP G V+GS +AA+
Sbjct: 5 EDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIGEKGHEAANVTGPAGEAVKGSPYAAD 64
Query: 117 KPKYNR-------RKAKANKRKRKSR 135
K + R R+ + R+SR
Sbjct: 65 KRRGYRNVHWVYPRRGNGRPQNRRSR 90
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 224 EDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
EDVFVH I NNPRK +++ +GE VEFD++ G+KG++ V
Sbjct: 5 EDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIGEKGHEAANV 48
>gi|147791391|emb|CAN59784.1| hypothetical protein VITISV_042163 [Vitis vinifera]
Length = 247
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVV+WFS + G+GFI ED+FVH IK + +++L EGETVEF I+ G+ G
Sbjct: 8 GVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDG----FRSLGEGETVEFQIVLGEDGR 63
Query: 96 -EAINVTGPDGRHVQGSQ 112
+A++VTGPDG VQGS+
Sbjct: 64 TKAVDVTGPDGSSVQGSK 81
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
GVV+WFS + G+GFI ED+FVH IK + +++L EGETVEF I+ G+ G
Sbjct: 8 GVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDG----FRSLGEGETVEFQIVLGEDG 62
>gi|225431120|ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
Length = 241
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVV+WFS + G+GFI ED+FVH IK + +++L EGETVEF I+ G+ G
Sbjct: 8 GVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDG----FRSLGEGETVEFQIVLGEDGR 63
Query: 96 -EAINVTGPDGRHVQGSQ 112
+A++VTGPDG VQGS+
Sbjct: 64 TKAVDVTGPDGSSVQGSK 81
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
GVV+WFS + G+GFI ED+FVH IK + +++L EGETVEF I+ G+ G
Sbjct: 8 GVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDG----FRSLGEGETVEFQIVLGEDG 62
>gi|304378|gb|AAA18017.1| CCAAT-binding protein, partial [Gallus gallus]
Length = 348
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G + +V++GYG + + EDVFVH IK NNPRK +++ +GETVEFD+++G+KG
Sbjct: 55 GNSEMVNVRNGYGLMNRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 114
Query: 96 EAINVTGPDGRHVQGSQFAANKPKYNR 122
EA NVTGP G VQG ++AA++ Y R
Sbjct: 115 EAANVTGPGGVPVQGGKYAADRNHYRR 141
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G + +V++GYG + + EDVFVH IK NNPRK +++ +GETVEFD+++G+KG
Sbjct: 55 GNSEMVNVRNGYGLMNRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 114
Query: 263 QFCFV 267
+ V
Sbjct: 115 EAANV 119
>gi|308497891|ref|XP_003111132.1| hypothetical protein CRE_03839 [Caenorhabditis remanei]
gi|308240680|gb|EFO84632.1| hypothetical protein CRE_03839 [Caenorhabditis remanei]
Length = 263
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K VL T + G VKW+SV YGFI+ +DVFVH I + K Y +TL
Sbjct: 49 EEEQKAKRVLTTGLQGKVKWYSVLRRYGFISREDGEKDVFVHQTAIAKSATEKFYLRTLG 108
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQF 113
+ E V FD+++G G EA NVTGP G +V GS++
Sbjct: 109 DEEEVIFDLVEGKNGPEAANVTGPAGENVVGSKY 142
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K VL T + G VKW+SV YGFI+ +DVFVH I + K Y +TL
Sbjct: 49 EEEQKAKRVLTTGLQGKVKWYSVLRRYGFISREDGEKDVFVHQTAIAKSATEKFYLRTLG 108
Query: 247 EGETVEFDIMQGDKGNQFCFV 267
+ E V FD+++G G + V
Sbjct: 109 DEEEVIFDLVEGKNGPEAANV 129
>gi|341877791|gb|EGT33726.1| hypothetical protein CAEBREN_10862 [Caenorhabditis brenneri]
Length = 265
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K VL T + G VKW+SV YGFI+ +DVFVH I + K Y +TL
Sbjct: 49 EEEQKAKKVLTTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSETEKFYLRTLG 108
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQF 113
+ E V FD++ G G EA NVTGP G +V GS++
Sbjct: 109 DDEEVLFDLVDGKNGPEAANVTGPAGANVVGSRY 142
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K VL T + G VKW+SV YGFI+ +DVFVH I + K Y +TL
Sbjct: 49 EEEQKAKKVLTTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSETEKFYLRTLG 108
Query: 247 EGETVEFDIMQGDKGNQFCFV 267
+ E V FD++ G G + V
Sbjct: 109 DDEEVLFDLVDGKNGPEAANV 129
>gi|341899012|gb|EGT54947.1| hypothetical protein CAEBREN_22260 [Caenorhabditis brenneri]
Length = 267
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K V+ T + G VKW+SV YGFI+ +DVFVH I ++ K Y +TL
Sbjct: 49 EEEQKAKNVITTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSDTEKFYLRTLG 108
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQF 113
+ E V FD+++G G EA NVTGP G +V GS++
Sbjct: 109 DEEEVLFDLVEGKNGPEAANVTGPAGANVVGSRY 142
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K V+ T + G VKW+SV YGFI+ +DVFVH I ++ K Y +TL
Sbjct: 49 EEEQKAKNVITTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSDTEKFYLRTLG 108
Query: 247 EGETVEFDIMQGDKGNQFCFV 267
+ E V FD+++G G + V
Sbjct: 109 DEEEVLFDLVEGKNGPEAANV 129
>gi|402892066|ref|XP_003909243.1| PREDICTED: LOW QUALITY PROTEIN: B box-binding protein-like [Papio
anubis]
Length = 359
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V+A KV G +K FSV++ Y F + ED FV +K NNPRK + + +G TVEF++
Sbjct: 162 VIARKVLGTIKCFSVRNRYSFTKRNDTKEDAFVQQTAVKKNNPRKHLRRVGDGMTVEFNV 221
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANK 117
+ G++G A +VTGP G QG + A +
Sbjct: 222 VXGEEGPXAASVTGPGGIPSQGGKHGAGR 250
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V+A KV G +K FSV++ Y F + ED FV +K NNPRK + + +G TVEF++
Sbjct: 162 VIARKVLGTIKCFSVRNRYSFTKRNDTKEDAFVQQTAVKKNNPRKHLRRVGDGMTVEFNV 221
Query: 256 MQGDKG 261
+ G++G
Sbjct: 222 VXGEEG 227
>gi|321173537|gb|ADW77531.1| cold-shock-like protein [Heterodera glycines]
Length = 221
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 27 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI--KYNNPRKLYKTLAEGETV 84
P+VL V G VKWF GYGFI +DVF+H+ I K N +Y L EG+ V
Sbjct: 8 PIVLERGVSGRVKWFDFSKGYGFITRDDGGQDVFLHASSIVRKVN----MYFVLIEGQRV 63
Query: 85 EFDIMQGDKGHEAINVTGPDGRHV 108
EFD++ G+KG EA V+GP G V
Sbjct: 64 EFDVIDGEKGREAAAVSGPGGIRV 87
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 194 PVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI--KYNNPRKLYKTLAEGETV 251
P+VL V G VKWF GYGFI +DVF+H+ I K N +Y L EG+ V
Sbjct: 8 PIVLERGVSGRVKWFDFSKGYGFITRDDGGQDVFLHASSIVRKVN----MYFVLIEGQRV 63
Query: 252 EFDIMQGDKGNQFCFV 267
EFD++ G+KG + V
Sbjct: 64 EFDVIDGEKGREAAAV 79
>gi|119616611|gb|EAW96205.1| cold shock domain protein A, isoform CRA_c [Homo sapiens]
Length = 142
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 63 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
S IK NNPRK +++ +GETVEFD+++G+KG EA NVTGPDG V+GS++AA++ R
Sbjct: 13 STAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRTLGRR 72
Query: 123 RKAKA 127
R+ A
Sbjct: 73 RRKGA 77
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
S IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 13 STAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANV 50
>gi|296470653|tpg|DAA12768.1| TPA: cold shock domain protein A short-like [Bos taurus]
Length = 261
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 22 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 81
+PKK V+A V G V F K GYGFI+ ++ EDVFVH I NP ++ G
Sbjct: 59 APKK---VIARSVLGSVVRFKEKKGYGFISMHNTQEDVFVHHTAITRKNPCMYRGSVENG 115
Query: 82 ETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
ETVEFD++QG++G +A VTGP ++GS + A+
Sbjct: 116 ETVEFDVVQGEQGTKAAKVTGPVDAPLKGSHYTAH 150
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 189 SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEG 248
+PKK V+A V G V F K GYGFI+ ++ EDVFVH I NP ++ G
Sbjct: 59 APKK---VIARSVLGSVVRFKEKKGYGFISMHNTQEDVFVHHTAITRKNPCMYRGSVENG 115
Query: 249 ETVEFDIMQGDKGNQ 263
ETVEFD++QG++G +
Sbjct: 116 ETVEFDVVQGEQGTK 130
>gi|341884870|gb|EGT40805.1| hypothetical protein CAEBREN_20898 [Caenorhabditis brenneri]
Length = 202
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K V+ T + G VKW+SV YGFI+ +DVFVH I ++ K Y +TL
Sbjct: 49 EEEQKAKNVITTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSDTEKFYLRTLG 108
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAA 115
+ E V FD+++G G EA NVTGP G +V GS A
Sbjct: 109 DEEEVLFDLVEGKNGPEAANVTGPAGANVVGSSGDA 144
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K V+ T + G VKW+SV YGFI+ +DVFVH I ++ K Y +TL
Sbjct: 49 EEEQKAKNVITTGLQGKVKWYSVLRRYGFISRNDGEKDVFVHQTAIAKSDTEKFYLRTLG 108
Query: 247 EGETVEFDIMQGDKG 261
+ E V FD+++G G
Sbjct: 109 DEEEVLFDLVEGKNG 123
>gi|339253316|ref|XP_003371881.1| DNA-binding protein A [Trichinella spiralis]
gi|316967791|gb|EFV52174.1| DNA-binding protein A [Trichinella spiralis]
Length = 377
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 63/135 (46%), Gaps = 46/135 (34%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVH------------------------------- 62
+ G VKWF+VK+GYGFI + ED+FVH
Sbjct: 121 IKGKVKWFNVKNGYGFINRLDTGEDIFVHQVSCSSESLFVCRRRNALVRLGLPAGDGTRC 180
Query: 63 ---------------SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRH 107
S I NNP K ++L + E VEFD++ G KG EA NVTGP+G+
Sbjct: 181 TGSAVWMVNKLGWANSTAIIKNNPNKFLRSLGDEEMVEFDVVDGSKGPEAANVTGPEGQP 240
Query: 108 VQGSQFAANKPKYNR 122
V GS++AA++ + R
Sbjct: 241 VVGSKYAADRALHYR 255
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 46/107 (42%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVH------------------------------- 229
+ G VKWF+VK+GYGFI + ED+FVH
Sbjct: 121 IKGKVKWFNVKNGYGFINRLDTGEDIFVHQVSCSSESLFVCRRRNALVRLGLPAGDGTRC 180
Query: 230 ---------------SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
S I NNP K ++L + E VEFD++ G KG
Sbjct: 181 TGSAVWMVNKLGWANSTAIIKNNPNKFLRSLGDEEMVEFDVVDGSKG 227
>gi|321468514|gb|EFX79498.1| hypothetical protein DAPPUDRAFT_52316 [Daphnia pulex]
Length = 147
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G KWF+V G+GFI + DVFVH I+ N ++ LAEGE VE + DKG
Sbjct: 1 GRCKWFNVTKGWGFITPDDGSPDVFVHQSVIRMNG----FRNLAEGEEVEMETKDADKGA 56
Query: 96 EAINVTGPDGRHVQGSQFAANKPKYNRR 123
EA VTGP G +GS A KP +R
Sbjct: 57 EATVVTGPGGTECRGSHRQARKPTKTKR 84
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G KWF+V G+GFI + DVFVH I+ N ++ LAEGE VE + DKG
Sbjct: 1 GRCKWFNVTKGWGFITPDDGSPDVFVHQSVIRMNG----FRNLAEGEEVEMETKDADKGA 56
Query: 263 QFCFV 267
+ V
Sbjct: 57 EATVV 61
>gi|209736846|gb|ACI69292.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
gi|303658085|gb|ADM15905.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
Length = 194
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 167 CLQMCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDV 226
Q + +E+ PS P+ + + K+ V+ATKV G VKWF+V++GYGFI + EDV
Sbjct: 7 TQQPPEPAVDSESPPSPPATASAGDKK--VIATKVLGTVKWFNVRNGYGFINRNDTKEDV 64
Query: 227 FVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG--DKGNQ 263
FVH IK NNP+K +++ +GE D QG D+GN+
Sbjct: 65 FVHQTAIKKNNPKKYLRSVGDGEG---DENQGGPDQGNK 100
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 1 MQMCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVF 60
Q + +E+ PS P+ + K+ V+ATKV G VKWF+V++GYGFI + EDVF
Sbjct: 8 QQPPEPAVDSESPPSPPATASAGDKK--VIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 65
Query: 61 VHSKRIKYNNPRKLYKTLAEGETVE 85
VH IK NNP+K +++ +GE E
Sbjct: 66 VHQTAIKKNNPKKYLRSVGDGEGDE 90
>gi|357145183|ref|XP_003573554.1| PREDICTED: glycine-rich protein 2b-like isoform 1 [Brachypodium
distachyon]
gi|357145187|ref|XP_003573555.1| PREDICTED: glycine-rich protein 2b-like isoform 2 [Brachypodium
distachyon]
gi|357145190|ref|XP_003573556.1| PREDICTED: glycine-rich protein 2b-like isoform 3 [Brachypodium
distachyon]
Length = 257
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
+ + ++ G VKWF+ G+GFI+ ED+FVH IK + +++LAEGE VEF
Sbjct: 1 MAMEARLKGTVKWFNDTKGFGFISPDDGGEDLFVHQSSIKADG----FRSLAEGEVVEFA 56
Query: 88 IMQGDKGH-EAINVTGPDGRHVQ 109
I +GD G +A++VTGPDG VQ
Sbjct: 57 ISEGDDGRTKAVDVTGPDGSFVQ 79
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
+ + ++ G VKWF+ G+GFI+ ED+FVH IK + +++LAEGE VEF
Sbjct: 1 MAMEARLKGTVKWFNDTKGFGFISPDDGGEDLFVHQSSIKADG----FRSLAEGEVVEFA 56
Query: 255 IMQGDKG 261
I +GD G
Sbjct: 57 ISEGDDG 63
>gi|326491571|dbj|BAJ94263.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 191
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
+ + ++ G VKWF+ G+GFI+ +ED+FVH IK + +++LAEGE VEF
Sbjct: 1 MAMEARMKGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADG----FRSLAEGEVVEFS 56
Query: 88 IMQGDKGH-EAINVTGPDGRHVQ 109
+ +GD G +A++VTGPDG VQ
Sbjct: 57 VSEGDDGRTKAVDVTGPDGSFVQ 79
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
+ + ++ G VKWF+ G+GFI+ +ED+FVH IK + +++LAEGE VEF
Sbjct: 1 MAMEARMKGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADG----FRSLAEGEVVEFS 56
Query: 255 IMQGDKG 261
+ +GD G
Sbjct: 57 VSEGDDG 63
>gi|223973253|gb|ACN30814.1| unknown [Zea mays]
Length = 444
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
A + G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +
Sbjct: 4 AARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSE 59
Query: 91 GDKGH-EAINVTGPDGRHVQGSQF 113
GD G +A++VTGPDG GS+
Sbjct: 60 GDDGRTKAVDVTGPDGSSASGSRL 83
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
A + G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +
Sbjct: 4 AARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSE 59
Query: 258 GDKG 261
GD G
Sbjct: 60 GDDG 63
>gi|326502466|dbj|BAJ95296.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326507234|dbj|BAJ95694.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 264
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
+ + ++ G VKWF+ G+GFI+ +ED+FVH IK + +++LAEGE VEF
Sbjct: 1 MAMEARMKGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADG----FRSLAEGEVVEFS 56
Query: 88 IMQGDKGH-EAINVTGPDGRHVQ 109
+ +GD G +A++VTGPDG VQ
Sbjct: 57 VSEGDDGRTKAVDVTGPDGSFVQ 79
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
+ + ++ G VKWF+ G+GFI+ +ED+FVH IK + +++LAEGE VEF
Sbjct: 1 MAMEARMKGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADG----FRSLAEGEVVEFS 56
Query: 255 IMQGDKG 261
+ +GD G
Sbjct: 57 VSEGDDG 63
>gi|224000015|ref|XP_002289680.1| cold-shock DNA-binding domain-containing protein [Thalassiosira
pseudonana CCMP1335]
gi|220974888|gb|EED93217.1| cold-shock DNA-binding domain-containing protein [Thalassiosira
pseudonana CCMP1335]
Length = 136
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF K G+GF+ + +VFVH I N +++L +GE VEF++MQ
Sbjct: 41 KIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANG----FRSLGDGEVVEFEVMQEP 96
Query: 93 KGH-EAINVTGPDGRHVQGS 111
G +A+NVTGPDG VQG+
Sbjct: 97 NGKWKALNVTGPDGSFVQGA 116
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
K+ G VKWF K G+GF+ + +VFVH I N +++L +GE VEF++MQ
Sbjct: 41 KIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANG----FRSLGDGEVVEFEVMQ 94
>gi|17507385|ref|NP_491645.1| Protein CEY-2 [Caenorhabditis elegans]
gi|373254598|emb|CCD71325.1| Protein CEY-2 [Caenorhabditis elegans]
Length = 267
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 21 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 79
E +K + T + G VKW+SV YGFI+ +D+FVH I + K Y +TL
Sbjct: 53 EEEQKSKTAITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLG 112
Query: 80 EGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA---ANKPKYNRR------------- 123
+ E V FD+++G G EA NVTGP+G +V GS++ ++ + NR+
Sbjct: 113 DDEEVLFDLVEGKNGPEAANVTGPNGDNVIGSRYRHKLLSRFRKNRKPRASVDGEESQST 172
Query: 124 -------KAKANKRKRKSRRNNRLFGVKYQ 146
A A K+K + +R NR K Q
Sbjct: 173 DAKPQEMSADAEKKKPRKQRKNRNRKSKAQ 202
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLY-KTLA 246
E +K + T + G VKW+SV YGFI+ +D+FVH I + K Y +TL
Sbjct: 53 EEEQKSKTAITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLG 112
Query: 247 EGETVEFDIMQGDKGNQFCFV 267
+ E V FD+++G G + V
Sbjct: 113 DDEEVLFDLVEGKNGPEAANV 133
>gi|410662829|ref|YP_006915200.1| cold-shock DNA-binding domain-containing protein [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025186|gb|AFU97470.1| cold-shock DNA-binding domain-containing protein [Simiduia
agarivorans SA1 = DSM 21679]
Length = 70
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A + GVVKWF+ GYGFI+ EDVFVH + I+ Y++LAEG++VEFD++
Sbjct: 1 MADRAVGVVKWFNNARGYGFISFGEQQEDVFVHYRNIRGEG----YRSLAEGQSVEFDLL 56
Query: 90 QGDKGHEAINV 100
+GDKG +A +V
Sbjct: 57 KGDKGLQAEDV 67
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A + GVVKWF+ GYGFI+ EDVFVH + I+ Y++LAEG++VEFD++
Sbjct: 1 MADRAVGVVKWFNNARGYGFISFGEQQEDVFVHYRNIRGEG----YRSLAEGQSVEFDLL 56
Query: 257 QGDKGNQ 263
+GDKG Q
Sbjct: 57 KGDKGLQ 63
>gi|242063850|ref|XP_002453214.1| hypothetical protein SORBIDRAFT_04g001720 [Sorghum bicolor]
gi|241933045|gb|EES06190.1| hypothetical protein SORBIDRAFT_04g001720 [Sorghum bicolor]
Length = 251
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDGR 64
Query: 96 -EAINVTGPDGRHVQ 109
+A++VTGPDG +V+
Sbjct: 65 TKAVDVTGPDGSYVK 79
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDG 63
>gi|162985|gb|AAA21677.1| transcription factor EF1(A) [Bos taurus]
Length = 110
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 83
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GET
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET 108
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 250
V+ATKV G VKWF+V++GYGFI + EDVFVH IK NNPRK +++ +GET
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET 108
>gi|209735380|gb|ACI68559.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
gi|209738580|gb|ACI70159.1| Nuclease-sensitive element-binding protein 1 [Salmo salar]
Length = 111
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 169 QMCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFV 228
Q + +E+ PS P+ + + K+ V+ATKV G VKWF+V++GYGFI + EDVFV
Sbjct: 9 QPPEPAVDSESPPSPPATASAGDKK--VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFV 66
Query: 229 HSKRIKYNNPRKLYKTLAEGETVEFD 254
H IK NNP+K +++ +G+ + D
Sbjct: 67 HQTAIKKNNPKKYLRSVGDGKEAKTD 92
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 1 MQMCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVF 60
Q + +E+ PS P+ + K+ V+ATKV G VKWF+V++GYGFI + EDVF
Sbjct: 8 QQPPEPAVDSESPPSPPATASAGDKK--VIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 65
Query: 61 VHSKRIKYNNPRKLYKTLAEGETVEFD 87
VH IK NNP+K +++ +G+ + D
Sbjct: 66 VHQTAIKKNNPKKYLRSVGDGKEAKTD 92
>gi|121631|sp|P27484.1|GRP2_NICSY RecName: Full=Glycine-rich protein 2
gi|19743|emb|CAA42622.1| nsGRP-2 [Nicotiana sylvestris]
Length = 214
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWFS + G+GFI ED+FVH I+ +++LAEGETVEF++ G G
Sbjct: 11 GTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEG----FRSLAEGETVEFEVESGGDGR 66
Query: 96 -EAINVTGPDGRHVQ 109
+A++VTGPDG VQ
Sbjct: 67 TKAVDVTGPDGAAVQ 81
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWFS + G+GFI ED+FVH I+ +++LAEGETVEF++ G G
Sbjct: 11 GTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEG----FRSLAEGETVEFEVESGGDG 65
>gi|62087216|dbj|BAD92055.1| germ cell specific Y-box binding protein variant [Homo sapiens]
Length = 268
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
+F + IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N+
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 119 KYNR 122
K R
Sbjct: 83 KSRR 86
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
+F + IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNV 64
>gi|226495947|ref|NP_001141714.1| uncharacterized protein LOC100273843 [Zea mays]
gi|194705650|gb|ACF86909.1| unknown [Zea mays]
Length = 303
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
Query: 21 ESPKKEPVV---LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKT 77
++P +PV A + G VKWF+ G+GFI+ +ED+FVH IK +++
Sbjct: 45 QAPFHKPVADLPAAARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRS 100
Query: 78 LAEGETVEFDIMQGDKGH-EAINVTGPDGRHV 108
LAEGE VEF + +GD G +A++VTGPDG V
Sbjct: 101 LAEGEEVEFSVSEGDDGRTKAVDVTGPDGSFV 132
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 188 ESPKKEPVV---LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKT 244
++P +PV A + G VKWF+ G+GFI+ +ED+FVH IK +++
Sbjct: 45 QAPFHKPVADLPAAARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRS 100
Query: 245 LAEGETVEFDIMQGDKG 261
LAEGE VEF + +GD G
Sbjct: 101 LAEGEEVEFSVSEGDDG 117
>gi|403222865|dbj|BAM40996.1| cold shock protein [Theileria orientalis strain Shintoku]
Length = 110
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 8/102 (7%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
++ G KWF+ K GYGFI T S EDVFVH I + +++L E E VE +++
Sbjct: 2 ARLSGTCKWFNSKKGYGFI-TLDSGEDVFVHQSEIYADG----FRSLRENEKVELEVVLE 56
Query: 92 DKGHEAINVTGPDGRHVQGSQ---FAANKPKYNRRKAKANKR 130
+ +AI+VTGPDG +V GSQ F +N+ +Y ++ A R
Sbjct: 57 NDRKKAIHVTGPDGDYVMGSQNELFRSNRNRYQDSESSAMYR 98
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ G KWF+ K GYGFI T S EDVFVH I + +++L E E VE +++
Sbjct: 2 ARLSGTCKWFNSKKGYGFI-TLDSGEDVFVHQSEIYADG----FRSLRENEKVELEVV 54
>gi|241813115|ref|XP_002414626.1| Y1 protein, putative [Ixodes scapularis]
gi|215508837|gb|EEC18291.1| Y1 protein, putative [Ixodes scapularis]
Length = 209
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
V G V+WF+VK+GYGFI + ED+FVH I N+P+KL +T++EGETV+FD++
Sbjct: 25 VLGTVQWFNVKNGYGFINRNDTREDIFVHQTAITRNHPQKLTRTVSEGETVQFDVV 80
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
V G V+WF+VK+GYGFI + ED+FVH I N+P+KL +T++EGETV+FD++
Sbjct: 25 VLGTVQWFNVKNGYGFINRNDTREDIFVHQTAITRNHPQKLTRTVSEGETVQFDVV 80
>gi|413926631|gb|AFW66563.1| hypothetical protein ZEAMMB73_047398 [Zea mays]
Length = 188
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDGR 64
Query: 96 -EAINVTGPDGRHVQ 109
+A++VTGPDG V+
Sbjct: 65 TKAVDVTGPDGSFVR 79
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDG 63
>gi|324511273|gb|ADY44699.1| Y-box factor [Ascaris suum]
Length = 269
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSS-NEDVFVHSKRIKYNNPRKLY-KTLAEGE 82
K+PV+ V G VKW+SV+ YGFIA DVFVH I + K Y ++L EGE
Sbjct: 70 KKPVI-EKGVTGKVKWYSVRYHYGFIARDDDVANDVFVHQTAIAKSRMVKYYLRSLEEGE 128
Query: 83 TVEFDIMQGDKGHEAINVTGPDGRHVQGS 111
V FDI++G +G EA NVTGP G V+G+
Sbjct: 129 EVLFDIVEGKQGPEAANVTGPHGVEVRGN 157
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSS-NEDVFVHSKRIKYNNPRKLY-KTLAEGE 249
K+PV+ V G VKW+SV+ YGFIA DVFVH I + K Y ++L EGE
Sbjct: 70 KKPVI-EKGVTGKVKWYSVRYHYGFIARDDDVANDVFVHQTAIAKSRMVKYYLRSLEEGE 128
Query: 250 TVEFDIMQGDKG 261
V FDI++G +G
Sbjct: 129 EVLFDIVEGKQG 140
>gi|223946111|gb|ACN27139.1| unknown [Zea mays]
Length = 187
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDGR 64
Query: 96 -EAINVTGPDGRHVQ 109
+A++VTGPDG V+
Sbjct: 65 TKAVDVTGPDGSFVR 79
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDG 63
>gi|238015158|gb|ACR38614.1| unknown [Zea mays]
Length = 240
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDGR 64
Query: 96 -EAINVTGPDGRHV 108
+A++VTGPDG V
Sbjct: 65 TKAVDVTGPDGSFV 78
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDG 63
>gi|363543235|ref|NP_001241832.1| uncharacterized protein LOC100857032 [Zea mays]
gi|224033945|gb|ACN36048.1| unknown [Zea mays]
gi|413926630|gb|AFW66562.1| hypothetical protein ZEAMMB73_047398 [Zea mays]
Length = 249
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDGR 64
Query: 96 -EAINVTGPDGRHV 108
+A++VTGPDG V
Sbjct: 65 TKAVDVTGPDGSFV 78
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +GD G
Sbjct: 9 GTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSEGDDG 63
>gi|326936337|ref|XP_003214212.1| PREDICTED: protein lin-28 homolog A-like, partial [Meleagris
gallopavo]
Length = 191
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 12 ATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFI-------ATPSSNEDVFVHSK 64
A P A +SPK E G+ KWF+V+ G+GF+ AT S DVFVH
Sbjct: 1 AKPGEEPAGDSPKAENESQPLHGSGICKWFNVRMGFGFLSMTAKGGATLDSPVDVFVHQS 60
Query: 65 RIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRK 124
++ +++L EGE VEF + KG E+I VTGP G GS+ +R+
Sbjct: 61 KLHMEG----FRSLKEGEAVEFTFKKSSKGLESIRVTGPGGVFCIGSERRPKGKSLQKRR 116
Query: 125 AKANK 129
+K ++
Sbjct: 117 SKGDR 121
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 179 ATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFI-------ATPSSNEDVFVHSK 231
A P A +SPK E G+ KWF+V+ G+GF+ AT S DVFVH
Sbjct: 1 AKPGEEPAGDSPKAENESQPLHGSGICKWFNVRMGFGFLSMTAKGGATLDSPVDVFVHQS 60
Query: 232 RIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
++ +++L EGE VEF + KG
Sbjct: 61 KLHMEG----FRSLKEGEAVEFTFKKSSKG 86
>gi|242247545|ref|NP_001156314.1| RNA-binding protein lin-28-like [Acyrthosiphon pisum]
gi|239792625|dbj|BAH72634.1| ACYPI009849 [Acyrthosiphon pisum]
Length = 250
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 11 EATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNN 70
++ SN + N P+ E + + G+ KWF+ K G+GF+ +DVFVH + IK +
Sbjct: 49 DSLSSNDAENLRPENEELPEGVRQ-GICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDG 107
Query: 71 PRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFA 114
+++L E E VEF + DKG EA VTGP G++ +GS+ A
Sbjct: 108 ----FRSLRENEHVEFTCHESDKGLEATLVTGPRGQYCKGSKKA 147
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G+ KWF+ K G+GF+ +DVFVH + IK + +++L E E VEF + DKG
Sbjct: 73 GICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDG----FRSLRENEHVEFTCHESDKGL 128
Query: 263 QFCFV 267
+ V
Sbjct: 129 EATLV 133
>gi|297744636|emb|CBI37898.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
++V G VKWF+ + G+GFI +D+FVH I+ +++L EGE VEF +
Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEG----FRSLGEGEAVEFVVESS 57
Query: 92 DKGH-EAINVTGPDGRHVQGSQ 112
D G +A++VTGPDG VQGS+
Sbjct: 58 DDGRTKAVDVTGPDGNPVQGSR 79
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
++V G VKWF+ + G+GFI +D+FVH I+ +++L EGE VEF +
Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEG----FRSLGEGEAVEFVVESS 57
Query: 259 DKG 261
D G
Sbjct: 58 DDG 60
>gi|226507970|ref|NP_001140374.1| uncharacterized protein LOC100272427 [Zea mays]
gi|194699220|gb|ACF83694.1| unknown [Zea mays]
Length = 395
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
A + G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +
Sbjct: 4 AARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSE 59
Query: 91 GDKGH-EAINVTGPDGRHV 108
GD G +A++VTGPDG V
Sbjct: 60 GDDGRTKAVDVTGPDGSFV 78
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
A + G VKWF+ G+GFI+ +ED+FVH IK +++LAEGE VEF + +
Sbjct: 4 AARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEG----FRSLAEGEEVEFSVSE 59
Query: 258 GDKG 261
GD G
Sbjct: 60 GDDG 63
>gi|313236956|emb|CBY12203.1| unnamed protein product [Oikopleura dioica]
Length = 270
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 4 CDSGTKAEATPSNPSANES---PKKEPV-----VLATKVCGVVKWFSVKSGYGFIATPSS 55
D+ E + +P A +S PKKE V VL V G VKWF++ G+GFI
Sbjct: 47 ADAPKAEEGSSVDPEAADSEAKPKKERVYKKKHVLTRNVAGTVKWFNISRGFGFIERNDG 106
Query: 56 NEDVFVHSKRIKYNNPRKLYKT-LAEGETVEFDIMQGDKGHEAINVTGPDG 105
DVF+H + + R + L GE VEFD+ QG KG EA+ VT P G
Sbjct: 107 GADVFLHQSGVVGSGRRHRFSLFLKGGEEVEFDVAQGAKGPEAVAVTSPGG 157
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 171 CDSGTKAEATPSNPSASES---PKKEPV-----VLATKVCGVVKWFSVKSGYGFIATPSS 222
D+ E + +P A++S PKKE V VL V G VKWF++ G+GFI
Sbjct: 47 ADAPKAEEGSSVDPEAADSEAKPKKERVYKKKHVLTRNVAGTVKWFNISRGFGFIERNDG 106
Query: 223 NEDVFVHSKRIKYNNPRKLYKT-LAEGETVEFDIMQGDKGNQFCFV 267
DVF+H + + R + L GE VEFD+ QG KG + V
Sbjct: 107 GADVFLHQSGVVGSGRRHRFSLFLKGGEEVEFDVAQGAKGPEAVAV 152
>gi|145347619|ref|XP_001418260.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578489|gb|ABO96553.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 106
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+AT+ G VKWF+ G+GFI +E++FVH I R ++ EGE VE+D+
Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVW----EGEEVEYDVD 56
Query: 90 QGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKAN 128
D +A+NVTGPDG V+G+ ++ + ++KAK +
Sbjct: 57 DTDFAPKAVNVTGPDGVAVKGAPRRRHRNRLTKQKAKTD 95
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+AT+ G VKWF+ G+GFI +E++FVH I R ++ EGE VE+D+
Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVW----EGEEVEYDVD 56
Query: 257 QGD 259
D
Sbjct: 57 DTD 59
>gi|402577849|gb|EJW71805.1| hypothetical protein WUBG_17286 [Wuchereria bancrofti]
Length = 124
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSS-NEDVFVHSKRIKYNNPRKLY-KTLAEGETVEF 86
+L V G VKW+SV+ YGFIA + DVFVH I + K Y +TL +GE V F
Sbjct: 43 ILEKGVKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLF 102
Query: 87 DIMQGDKGHEAINVTGPDGRHV 108
DI++G +G EA NVTGP+G V
Sbjct: 103 DIVKGKQGPEAANVTGPNGTEV 124
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSS-NEDVFVHSKRIKYNNPRKLY-KTLAEGETVEF 253
+L V G VKW+SV+ YGFIA + DVFVH I + K Y +TL +GE V F
Sbjct: 43 ILEKGVKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLF 102
Query: 254 DIMQGDKG 261
DI++G +G
Sbjct: 103 DIVKGKQG 110
>gi|356544794|ref|XP_003540832.1| PREDICTED: glycine-rich protein 2b-like [Glycine max]
Length = 200
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI- 88
++ +V G VKWF+ + G+GFI+ ++D+FVH +IK + +++LAEGE+VEF I
Sbjct: 1 MSGRVSGKVKWFNDQKGFGFISPDDGSDDLFVHQSQIKSDG----FRSLAEGESVEFAIE 56
Query: 89 MQGDKGHEAINVTGPDGRHVQ 109
+ D +A++VTGPDG VQ
Sbjct: 57 SESDGRAKAVDVTGPDGASVQ 77
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++ +V G VKWF+ + G+GFI+ ++D+FVH +IK + +++LAEGE+VEF I
Sbjct: 1 MSGRVSGKVKWFNDQKGFGFISPDDGSDDLFVHQSQIKSDG----FRSLAEGESVEFAI 55
>gi|22125131|ref|NP_668554.1| cold shock protein [Yersinia pestis KIM10+]
gi|45442244|ref|NP_993783.1| cold shock protein [Yersinia pestis biovar Microtus str. 91001]
gi|21957990|gb|AAM84805.1|AE013726_8 homolog of Salmonella cold shock protein [Yersinia pestis KIM10+]
gi|45437108|gb|AAS62660.1| cold shock protein [Yersinia pestis biovar Microtus str. 91001]
Length = 80
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
+ ++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF
Sbjct: 9 IFMSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFS 64
Query: 88 IMQGDKGHEAINVT 101
I QG KG A+NV
Sbjct: 65 IEQGQKGPSAVNVV 78
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
+ ++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF
Sbjct: 9 IFMSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFS 64
Query: 255 IMQGDKG 261
I QG KG
Sbjct: 65 IEQGQKG 71
>gi|71027909|ref|XP_763598.1| cold shock protein [Theileria parva strain Muguga]
gi|68350551|gb|EAN31315.1| cold shock protein, putative [Theileria parva]
Length = 94
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
T++ GV KWF+ K GYGFI T + EDVFVH I + +++L E E VE +++
Sbjct: 2 TRLNGVCKWFNNKKGYGFI-TLENGEDVFVHQSEIYADG----FRSLRENEKVELEVIMD 56
Query: 92 DKGHEAINVTGPDGRHVQG--SQFAANKPKYN 121
+ +AI+VTGP+G HV G S + N K+N
Sbjct: 57 NNRKKAIHVTGPNGSHVTGTNSHYGNNNDKFN 88
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
T++ GV KWF+ K GYGFI T + EDVFVH I + +++L E E VE +++
Sbjct: 2 TRLNGVCKWFNNKKGYGFI-TLENGEDVFVHQSEIYADG----FRSLRENEKVELEVI 54
>gi|224542054|ref|ZP_03682593.1| hypothetical protein CATMIT_01228 [Catenibacterium mitsuokai DSM
15897]
gi|224524987|gb|EEF94092.1| cold shock protein CspA [Catenibacterium mitsuokai DSM 15897]
Length = 67
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G VKWF + GYGFI ++D+FVH I + YKTL EG+TVEFD+++GD+
Sbjct: 1 MTGKVKWFKAEKGYGFITVEGQSKDIFVHFSAINADG----YKTLEEGQTVEFDVVEGDR 56
Query: 94 GHEAINVT 101
G +A NVT
Sbjct: 57 GPQAANVT 64
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G VKWF + GYGFI ++D+FVH I + YKTL EG+TVEFD+++GD+
Sbjct: 1 MTGKVKWFKAEKGYGFITVEGQSKDIFVHFSAINADG----YKTLEEGQTVEFDVVEGDR 56
Query: 261 GNQ 263
G Q
Sbjct: 57 GPQ 59
>gi|313221374|emb|CBY32128.1| unnamed protein product [Oikopleura dioica]
gi|313241319|emb|CBY33595.1| unnamed protein product [Oikopleura dioica]
Length = 270
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 4 CDSGTKAEATPSNPSANES---PKKEPV-----VLATKVCGVVKWFSVKSGYGFIATPSS 55
D+ E + +P A +S PKKE V VL V G VKWF++ G+GFI
Sbjct: 47 ADAPKAEEGSSVDPEAVDSGAKPKKERVFKKKHVLTRNVTGTVKWFNISRGFGFIERNDG 106
Query: 56 NEDVFVHSKRIKYNNPRKLYKT-LAEGETVEFDIMQGDKGHEAINVTGPDG 105
DVF+H + + R + L GE VEFD+ QG KG EA+ VT P G
Sbjct: 107 GADVFLHQSGVVGSGRRHRFSLFLKGGEEVEFDVAQGAKGPEAVAVTSPGG 157
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 171 CDSGTKAEATPSNPSASES---PKKEPV-----VLATKVCGVVKWFSVKSGYGFIATPSS 222
D+ E + +P A +S PKKE V VL V G VKWF++ G+GFI
Sbjct: 47 ADAPKAEEGSSVDPEAVDSGAKPKKERVFKKKHVLTRNVTGTVKWFNISRGFGFIERNDG 106
Query: 223 NEDVFVHSKRIKYNNPRKLYKT-LAEGETVEFDIMQGDKGNQFCFV 267
DVF+H + + R + L GE VEFD+ QG KG + V
Sbjct: 107 GADVFLHQSGVVGSGRRHRFSLFLKGGEEVEFDVAQGAKGPEAVAV 152
>gi|357122544|ref|XP_003562975.1| PREDICTED: protein lin-28 homolog [Brachypodium distachyon]
Length = 203
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A +V G VKWF+V+ G+GFI+ ED+FVH IK + +++L EG TVEF +
Sbjct: 1 MAERVKGTVKWFNVEKGFGFISPEDGGEDLFVHQSSIKSDG----FRSLDEGATVEFVVG 56
Query: 90 QGDKGH-EAINVTGPDG 105
GD G +AI+VTGP G
Sbjct: 57 SGDDGRTKAIDVTGPGG 73
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A +V G VKWF+V+ G+GFI+ ED+FVH IK + +++L EG TVEF +
Sbjct: 1 MAERVKGTVKWFNVEKGFGFISPEDGGEDLFVHQSSIKSDG----FRSLDEGATVEFVVG 56
Query: 257 QGDKG 261
GD G
Sbjct: 57 SGDDG 61
>gi|281342196|gb|EFB17780.1| hypothetical protein PANDA_017230 [Ailuropoda melanoleuca]
Length = 236
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 42/51 (82%)
Query: 66 IKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G VQGS++AA+
Sbjct: 3 IKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 53
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 233 IKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 3 IKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 38
>gi|238762682|ref|ZP_04623651.1| Cold shock-like protein cspI [Yersinia kristensenii ATCC 33638]
gi|238698987|gb|EEP91735.1| Cold shock-like protein cspI [Yersinia kristensenii ATCC 33638]
Length = 80
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
+ ++TK+ G+VKWF G+GFI+ ++DVFVH I+ + YKTL EG+ VEF
Sbjct: 9 ISMSTKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGTD----YKTLDEGQNVEFS 64
Query: 88 IMQGDKGHEAINV 100
I QG KG A+NV
Sbjct: 65 IEQGQKGPSAVNV 77
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
+ ++TK+ G+VKWF G+GFI+ ++DVFVH I+ + YKTL EG+ VEF
Sbjct: 9 ISMSTKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGTD----YKTLDEGQNVEFS 64
Query: 255 IMQGDKG 261
I QG KG
Sbjct: 65 IEQGQKG 71
>gi|302800247|ref|XP_002981881.1| hypothetical protein SELMODRAFT_154869 [Selaginella moellendorffii]
gi|300150323|gb|EFJ16974.1| hypothetical protein SELMODRAFT_154869 [Selaginella moellendorffii]
Length = 182
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG-DKG 94
G VKWF+V G+GFI +E++FVH I +++L EGE VEF + QG D+
Sbjct: 11 GKVKWFNVTKGFGFITPDDGSEELFVHQSAIFAEG----FRSLREGEIVEFSVEQGEDQR 66
Query: 95 HEAINVTGPDGRHVQGS 111
A +VTGPDG HVQG+
Sbjct: 67 MRAADVTGPDGSHVQGA 83
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
G VKWF+V G+GFI +E++FVH I +++L EGE VEF + QG+
Sbjct: 11 GKVKWFNVTKGFGFITPDDGSEELFVHQSAIFAEG----FRSLREGEIVEFSVEQGE 63
>gi|82654186|ref|NP_001026944.2| protein lin-28 homolog A [Gallus gallus]
gi|116248185|sp|Q45KJ5.2|LN28A_CHICK RecName: Full=Protein lin-28 homolog A; Short=Lin-28A
gi|82622705|gb|AAZ38895.2| LIN28A [Gallus gallus]
Length = 202
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 10 AEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFI-------ATPSSNEDVFVH 62
A A P + +SPK E G+ KWF+V+ G+GF+ A S DVFVH
Sbjct: 10 AGAKPGEEPSGDSPKAENESQPLHGSGICKWFNVRMGFGFLSMTAKGGAMLDSPVDVFVH 69
Query: 63 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
++ +++L EGE VEF + KG E+I VTGP G GS+ +
Sbjct: 70 QSKLHMEG----FRSLKEGEAVEFTFKKSSKGLESIRVTGPGGVFCIGSERRPKSKSLQK 125
Query: 123 RKAKANK 129
R++K ++
Sbjct: 126 RRSKGDR 132
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 177 AEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFI-------ATPSSNEDVFVH 229
A A P + +SPK E G+ KWF+V+ G+GF+ A S DVFVH
Sbjct: 10 AGAKPGEEPSGDSPKAENESQPLHGSGICKWFNVRMGFGFLSMTAKGGAMLDSPVDVFVH 69
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
++ +++L EGE VEF + KG
Sbjct: 70 QSKLHMEG----FRSLKEGEAVEFTFKKSSKG 97
>gi|170031766|ref|XP_001843755.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870926|gb|EDS34309.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 247
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
++ G VKWF+VK G+GFI + ED+FVH I N R +++ EGE VEF ++
Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGVI--- 107
Query: 93 KGHEAINVTGPDGRHVQGSQFAANKPK 119
A VTGP + V+GS F +PK
Sbjct: 108 ----ATKVTGPGFQRVKGSAFV--RPK 128
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ G VKWF+VK G+GFI + ED+FVH I N R +++ EGE VEF ++
Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGVI 107
>gi|357122574|ref|XP_003562990.1| PREDICTED: glycine-rich protein 2b-like [Brachypodium distachyon]
Length = 193
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A +V G VKWF+V+ G+GFI ED+FVH IK + +++L EG TVEF +
Sbjct: 1 MAERVKGTVKWFNVEKGFGFITPEDGGEDLFVHQSSIKSDG----FRSLDEGATVEFVVG 56
Query: 90 QGDKGH-EAINVTGPDG 105
GD G +AI+VTGP G
Sbjct: 57 SGDDGRTKAIDVTGPGG 73
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A +V G VKWF+V+ G+GFI ED+FVH IK + +++L EG TVEF +
Sbjct: 1 MAERVKGTVKWFNVEKGFGFITPEDGGEDLFVHQSSIKSDG----FRSLDEGATVEFVVG 56
Query: 257 QGDKG 261
GD G
Sbjct: 57 SGDDG 61
>gi|51597265|ref|YP_071456.1| cold shock protein [Yersinia pseudotuberculosis IP 32953]
gi|108808380|ref|YP_652296.1| cold shock protein [Yersinia pestis Antiqua]
gi|108811305|ref|YP_647072.1| cold shock protein [Yersinia pestis Nepal516]
gi|123441290|ref|YP_001005277.1| cold shock-like protein cspG [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145598899|ref|YP_001162975.1| cold shock protein [Yersinia pestis Pestoides F]
gi|149365449|ref|ZP_01887484.1| cold shock protein [Yersinia pestis CA88-4125]
gi|153949592|ref|YP_001400051.1| cold shock protein [Yersinia pseudotuberculosis IP 31758]
gi|162420073|ref|YP_001607873.1| cold shock protein [Yersinia pestis Angola]
gi|165925316|ref|ZP_02221148.1| cold shock protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939935|ref|ZP_02228473.1| cold shock protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166008469|ref|ZP_02229367.1| cold shock protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212413|ref|ZP_02238448.1| cold shock protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167398538|ref|ZP_02304062.1| cold shock protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421189|ref|ZP_02312942.1| cold shock protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423656|ref|ZP_02315409.1| cold shock protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170023370|ref|YP_001719875.1| cold-shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis YPIII]
gi|186896369|ref|YP_001873481.1| cold-shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis PB1/+]
gi|218929733|ref|YP_002347608.1| cold shock protein [Yersinia pestis CO92]
gi|229838213|ref|ZP_04458372.1| cold shock protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229895592|ref|ZP_04510763.1| cold shock protein [Yersinia pestis Pestoides A]
gi|229898778|ref|ZP_04513923.1| cold shock protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229901551|ref|ZP_04516673.1| cold shock protein [Yersinia pestis Nepal516]
gi|270489738|ref|ZP_06206812.1| transcriptional repressor activity CueR [Yersinia pestis KIM D27]
gi|332162760|ref|YP_004299337.1| cold shock-like protein cspG [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|384139509|ref|YP_005522211.1| cold shock protein [Yersinia pestis A1122]
gi|384415630|ref|YP_005624992.1| cold shock protein [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|386311612|ref|YP_006007668.1| cold shock protein CspG [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418242739|ref|ZP_12869243.1| cold shock protein [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|420259642|ref|ZP_14762343.1| cold shock protein [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|420547644|ref|ZP_15045516.1| cold shock-like protein CspG [Yersinia pestis PY-01]
gi|420552974|ref|ZP_15050283.1| cold shock-like protein CspG [Yersinia pestis PY-02]
gi|420558531|ref|ZP_15055146.1| cold shock-like protein CspG [Yersinia pestis PY-03]
gi|420563990|ref|ZP_15060005.1| cold shock-like protein CspG [Yersinia pestis PY-04]
gi|420569029|ref|ZP_15064581.1| cold shock-like protein CspG [Yersinia pestis PY-05]
gi|420574687|ref|ZP_15069704.1| cold shock-like protein CspG [Yersinia pestis PY-06]
gi|420580002|ref|ZP_15074530.1| cold shock-like protein CspG [Yersinia pestis PY-07]
gi|420585337|ref|ZP_15079367.1| cold shock-like protein CspG [Yersinia pestis PY-08]
gi|420590472|ref|ZP_15083986.1| cold shock-like protein CspG [Yersinia pestis PY-09]
gi|420595862|ref|ZP_15088834.1| cold shock-like protein CspG [Yersinia pestis PY-10]
gi|420601514|ref|ZP_15093869.1| cold shock-like protein CspG [Yersinia pestis PY-11]
gi|420606931|ref|ZP_15098753.1| cold shock-like protein CspG [Yersinia pestis PY-12]
gi|420612341|ref|ZP_15103616.1| cold shock-like protein CspG [Yersinia pestis PY-13]
gi|420617708|ref|ZP_15108319.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|420623014|ref|ZP_15113068.1| cold shock-like protein CspG [Yersinia pestis PY-15]
gi|420628111|ref|ZP_15117695.1| cold shock-like protein CspG [Yersinia pestis PY-16]
gi|420633220|ref|ZP_15122283.1| cold shock-like protein CspG [Yersinia pestis PY-19]
gi|420638416|ref|ZP_15126951.1| cold shock-like protein CspG [Yersinia pestis PY-25]
gi|420643980|ref|ZP_15132017.1| cold shock-like protein CspG [Yersinia pestis PY-29]
gi|420649171|ref|ZP_15136719.1| cold shock-like protein CspG [Yersinia pestis PY-32]
gi|420654828|ref|ZP_15141803.1| cold shock-like protein CspG [Yersinia pestis PY-34]
gi|420660300|ref|ZP_15146716.1| cold shock-like protein CspG [Yersinia pestis PY-36]
gi|420665631|ref|ZP_15151496.1| cold shock-like protein CspG [Yersinia pestis PY-42]
gi|420670500|ref|ZP_15155927.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|420675836|ref|ZP_15160781.1| cold shock-like protein CspG [Yersinia pestis PY-46]
gi|420681446|ref|ZP_15165857.1| cold shock-like protein CspG [Yersinia pestis PY-47]
gi|420686753|ref|ZP_15170587.1| cold shock-like protein CspG [Yersinia pestis PY-48]
gi|420691963|ref|ZP_15175167.1| cold shock-like protein CspG [Yersinia pestis PY-52]
gi|420697739|ref|ZP_15180243.1| cold shock-like protein CspG [Yersinia pestis PY-53]
gi|420703458|ref|ZP_15184872.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|420708977|ref|ZP_15189655.1| cold shock-like protein CspG [Yersinia pestis PY-55]
gi|420714400|ref|ZP_15194494.1| cold shock-like protein CspG [Yersinia pestis PY-56]
gi|420719893|ref|ZP_15199232.1| cold shock-like protein CspG [Yersinia pestis PY-58]
gi|420725390|ref|ZP_15204037.1| cold shock-like protein CspG [Yersinia pestis PY-59]
gi|420730998|ref|ZP_15209066.1| cold shock-like protein CspG [Yersinia pestis PY-60]
gi|420736017|ref|ZP_15213602.1| cold shock-like protein CspG [Yersinia pestis PY-61]
gi|420741491|ref|ZP_15218522.1| cold shock-like protein CspG [Yersinia pestis PY-63]
gi|420747133|ref|ZP_15223330.1| cold shock-like protein CspG [Yersinia pestis PY-64]
gi|420752646|ref|ZP_15228207.1| cold shock-like protein CspG [Yersinia pestis PY-65]
gi|420758289|ref|ZP_15232824.1| cold shock-like protein CspG [Yersinia pestis PY-66]
gi|420763697|ref|ZP_15237488.1| cold shock-like protein CspG [Yersinia pestis PY-71]
gi|420768901|ref|ZP_15242163.1| cold shock-like protein CspG [Yersinia pestis PY-72]
gi|420773897|ref|ZP_15246676.1| cold shock-like protein CspG [Yersinia pestis PY-76]
gi|420779493|ref|ZP_15251619.1| cold shock-like protein CspG [Yersinia pestis PY-88]
gi|420785073|ref|ZP_15256503.1| cold shock-like protein CspG [Yersinia pestis PY-89]
gi|420790264|ref|ZP_15261145.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|420795775|ref|ZP_15266102.1| cold shock-like protein CspG [Yersinia pestis PY-91]
gi|420800831|ref|ZP_15270641.1| cold shock-like protein CspG [Yersinia pestis PY-92]
gi|420806207|ref|ZP_15275506.1| cold shock-like protein CspG [Yersinia pestis PY-93]
gi|420811535|ref|ZP_15280304.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|420817069|ref|ZP_15285289.1| cold shock-like protein CspG [Yersinia pestis PY-95]
gi|420822385|ref|ZP_15290067.1| cold shock-like protein CspG [Yersinia pestis PY-96]
gi|420827467|ref|ZP_15294627.1| cold shock-like protein CspG [Yersinia pestis PY-98]
gi|420833172|ref|ZP_15299783.1| cold shock-like protein CspG [Yersinia pestis PY-99]
gi|420838029|ref|ZP_15304175.1| cold shock-like protein CspG [Yersinia pestis PY-100]
gi|420843210|ref|ZP_15308874.1| cold shock-like protein CspG [Yersinia pestis PY-101]
gi|420848866|ref|ZP_15313960.1| cold shock-like protein CspG [Yersinia pestis PY-102]
gi|420854442|ref|ZP_15318728.1| cold shock-like protein CspG [Yersinia pestis PY-103]
gi|420859728|ref|ZP_15323340.1| cold shock-like protein CspG [Yersinia pestis PY-113]
gi|421764149|ref|ZP_16200941.1| cold shock protein [Yersinia pestis INS]
gi|433547887|ref|ZP_20503937.1| homolog of Salmonella cold shock protein [Yersinia enterocolitica
IP 10393]
gi|61221540|sp|P0A362.1|CSPB_YERPE RecName: Full=Cold shock-like protein CspB
gi|61221541|sp|P0A363.1|CSPB_YEREN RecName: Full=Cold shock-like protein CspB
gi|3249024|gb|AAC24037.1| cold shock protein CspB [Yersinia enterocolitica]
gi|51590547|emb|CAH22188.1| cold shock protein [Yersinia pseudotuberculosis IP 32953]
gi|108774953|gb|ABG17472.1| cold-shock DNA-binding protein family [Yersinia pestis Nepal516]
gi|108780293|gb|ABG14351.1| cold-shock DNA-binding protein family [Yersinia pestis Antiqua]
gi|115348344|emb|CAL21278.1| cold shock protein [Yersinia pestis CO92]
gi|122088251|emb|CAL11041.1| cold shock-like protein cspG [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145210595|gb|ABP40002.1| cold-shock DNA-binding protein family [Yersinia pestis Pestoides F]
gi|149291862|gb|EDM41936.1| cold shock protein [Yersinia pestis CA88-4125]
gi|152961087|gb|ABS48548.1| cold shock protein [Yersinia pseudotuberculosis IP 31758]
gi|162352888|gb|ABX86836.1| cold shock protein [Yersinia pestis Angola]
gi|165912154|gb|EDR30793.1| cold shock protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165922923|gb|EDR40074.1| cold shock protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992851|gb|EDR45152.1| cold shock protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206344|gb|EDR50824.1| cold shock protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960678|gb|EDR56699.1| cold shock protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051042|gb|EDR62450.1| cold shock protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057826|gb|EDR67572.1| cold shock protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169749904|gb|ACA67422.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
YPIII]
gi|186699395|gb|ACC90024.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
PB1/+]
gi|229681480|gb|EEO77574.1| cold shock protein [Yersinia pestis Nepal516]
gi|229688326|gb|EEO80397.1| cold shock protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229694579|gb|EEO84626.1| cold shock protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701398|gb|EEO89426.1| cold shock protein [Yersinia pestis Pestoides A]
gi|270338242|gb|EFA49019.1| transcriptional repressor activity CueR [Yersinia pestis KIM D27]
gi|318606863|emb|CBY28361.1| cold shock protein CspG [Yersinia enterocolitica subsp. palearctica
Y11]
gi|320016134|gb|ADV99705.1| cold shock protein [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|325666990|gb|ADZ43634.1| cold shock-like protein cspG [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859919|emb|CBX70249.1| cold shock-like protein cspB [Yersinia enterocolitica W22703]
gi|342854638|gb|AEL73191.1| cold shock protein [Yersinia pestis A1122]
gi|351777816|gb|EHB20007.1| cold shock protein [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|391424635|gb|EIQ86990.1| cold shock-like protein CspG [Yersinia pestis PY-01]
gi|391425897|gb|EIQ88129.1| cold shock-like protein CspG [Yersinia pestis PY-02]
gi|391426627|gb|EIQ88794.1| cold shock-like protein CspG [Yersinia pestis PY-03]
gi|391439838|gb|EIR00456.1| cold shock-like protein CspG [Yersinia pestis PY-04]
gi|391441332|gb|EIR01830.1| cold shock-like protein CspG [Yersinia pestis PY-05]
gi|391444794|gb|EIR04984.1| cold shock-like protein CspG [Yersinia pestis PY-06]
gi|391456689|gb|EIR15694.1| cold shock-like protein CspG [Yersinia pestis PY-07]
gi|391457647|gb|EIR16571.1| cold shock-like protein CspG [Yersinia pestis PY-08]
gi|391460009|gb|EIR18744.1| cold shock-like protein CspG [Yersinia pestis PY-09]
gi|391472802|gb|EIR30229.1| cold shock-like protein CspG [Yersinia pestis PY-10]
gi|391474589|gb|EIR31867.1| cold shock-like protein CspG [Yersinia pestis PY-11]
gi|391475238|gb|EIR32455.1| cold shock-like protein CspG [Yersinia pestis PY-12]
gi|391489019|gb|EIR44805.1| cold shock-like protein CspG [Yersinia pestis PY-13]
gi|391490169|gb|EIR45842.1| cold shock-like protein CspG [Yersinia pestis PY-15]
gi|391491674|gb|EIR47207.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|391504469|gb|EIR58558.1| cold shock-like protein CspG [Yersinia pestis PY-16]
gi|391505126|gb|EIR59160.1| cold shock-like protein CspG [Yersinia pestis PY-19]
gi|391509993|gb|EIR63568.1| cold shock-like protein CspG [Yersinia pestis PY-25]
gi|391520446|gb|EIR72999.1| cold shock-like protein CspG [Yersinia pestis PY-29]
gi|391522639|gb|EIR75017.1| cold shock-like protein CspG [Yersinia pestis PY-34]
gi|391523720|gb|EIR76007.1| cold shock-like protein CspG [Yersinia pestis PY-32]
gi|391535691|gb|EIR86746.1| cold shock-like protein CspG [Yersinia pestis PY-36]
gi|391538327|gb|EIR89143.1| cold shock-like protein CspG [Yersinia pestis PY-42]
gi|391540516|gb|EIR91136.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|391553590|gb|EIS02906.1| cold shock-like protein CspG [Yersinia pestis PY-46]
gi|391554051|gb|EIS03328.1| cold shock-like protein CspG [Yersinia pestis PY-47]
gi|391555000|gb|EIS04199.1| cold shock-like protein CspG [Yersinia pestis PY-48]
gi|391568675|gb|EIS16370.1| cold shock-like protein CspG [Yersinia pestis PY-52]
gi|391569728|gb|EIS17280.1| cold shock-like protein CspG [Yersinia pestis PY-53]
gi|391575573|gb|EIS22254.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|391582518|gb|EIS28271.1| cold shock-like protein CspG [Yersinia pestis PY-55]
gi|391585252|gb|EIS30680.1| cold shock-like protein CspG [Yersinia pestis PY-56]
gi|391596060|gb|EIS40037.1| cold shock-like protein CspG [Yersinia pestis PY-58]
gi|391598525|gb|EIS42235.1| cold shock-like protein CspG [Yersinia pestis PY-60]
gi|391600040|gb|EIS43604.1| cold shock-like protein CspG [Yersinia pestis PY-59]
gi|391612928|gb|EIS54947.1| cold shock-like protein CspG [Yersinia pestis PY-61]
gi|391613518|gb|EIS55477.1| cold shock-like protein CspG [Yersinia pestis PY-63]
gi|391617486|gb|EIS59026.1| cold shock-like protein CspG [Yersinia pestis PY-64]
gi|391625742|gb|EIS66197.1| cold shock-like protein CspG [Yersinia pestis PY-65]
gi|391632281|gb|EIS71824.1| cold shock-like protein CspG [Yersinia pestis PY-66]
gi|391636619|gb|EIS75632.1| cold shock-like protein CspG [Yersinia pestis PY-71]
gi|391638981|gb|EIS77725.1| cold shock-like protein CspG [Yersinia pestis PY-72]
gi|391648692|gb|EIS86174.1| cold shock-like protein CspG [Yersinia pestis PY-76]
gi|391652671|gb|EIS89710.1| cold shock-like protein CspG [Yersinia pestis PY-88]
gi|391657230|gb|EIS93761.1| cold shock-like protein CspG [Yersinia pestis PY-89]
gi|391661623|gb|EIS97647.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|391669598|gb|EIT04718.1| cold shock-like protein CspG [Yersinia pestis PY-91]
gi|391678883|gb|EIT13063.1| cold shock-like protein CspG [Yersinia pestis PY-93]
gi|391679866|gb|EIT13962.1| cold shock-like protein CspG [Yersinia pestis PY-92]
gi|391680739|gb|EIT14761.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|391692768|gb|EIT25573.1| cold shock-like protein CspG [Yersinia pestis PY-95]
gi|391695690|gb|EIT28238.1| cold shock-like protein CspG [Yersinia pestis PY-96]
gi|391697493|gb|EIT29883.1| cold shock-like protein CspG [Yersinia pestis PY-98]
gi|391708642|gb|EIT39886.1| cold shock-like protein CspG [Yersinia pestis PY-99]
gi|391713144|gb|EIT43951.1| cold shock-like protein CspG [Yersinia pestis PY-100]
gi|391713840|gb|EIT44576.1| cold shock-like protein CspG [Yersinia pestis PY-101]
gi|391725218|gb|EIT54705.1| cold shock-like protein CspG [Yersinia pestis PY-102]
gi|391727059|gb|EIT56328.1| cold shock-like protein CspG [Yersinia pestis PY-103]
gi|391733633|gb|EIT61982.1| cold shock-like protein CspG [Yersinia pestis PY-113]
gi|404512892|gb|EKA26726.1| cold shock protein [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|411175463|gb|EKS45489.1| cold shock protein [Yersinia pestis INS]
gi|431790447|emb|CCO66977.1| homolog of Salmonella cold shock protein [Yersinia enterocolitica
IP 10393]
Length = 70
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFSIE 56
Query: 90 QGDKGHEAINVT 101
QG KG A+NV
Sbjct: 57 QGQKGPSAVNVV 68
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGQKG 61
>gi|356538622|ref|XP_003537800.1| PREDICTED: glycine-rich protein 2b-like [Glycine max]
Length = 201
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI- 88
++ +V G VKWF+ + G+GFI +E++FVH +IK + +++LAEGE+VEF I
Sbjct: 1 MSGRVSGKVKWFNDQKGFGFITPDDGSEELFVHQSQIKSDG----FRSLAEGESVEFAIE 56
Query: 89 MQGDKGHEAINVTGPDGRHVQ 109
+ D +A++VTGPDG VQ
Sbjct: 57 SESDGRAKAVDVTGPDGASVQ 77
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++ +V G VKWF+ + G+GFI +E++FVH +IK + +++LAEGE+VEF I
Sbjct: 1 MSGRVSGKVKWFNDQKGFGFITPDDGSEELFVHQSQIKSDG----FRSLAEGESVEFAI 55
>gi|372266587|ref|ZP_09502635.1| cold shock protein [Alteromonas sp. S89]
Length = 71
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ +V G VKWF+ GYGFI +ED+FVH + I+ + YKTL EG+ VEF++
Sbjct: 1 MSDRVTGTVKWFNNARGYGFITCSEGSEDIFVHYRSIRGDG----YKTLNEGQAVEFEMQ 56
Query: 90 QGDKGHEAINV 100
QGDKG A +V
Sbjct: 57 QGDKGLLAEDV 67
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ +V G VKWF+ GYGFI +ED+FVH + I+ + YKTL EG+ VEF++
Sbjct: 1 MSDRVTGTVKWFNNARGYGFITCSEGSEDIFVHYRSIRGDG----YKTLNEGQAVEFEMQ 56
Query: 257 QGDKG 261
QGDKG
Sbjct: 57 QGDKG 61
>gi|431893989|gb|ELK03795.1| Y-box-binding protein 2 [Pteropus alecto]
Length = 649
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 66 IKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 39 IKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 89
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 233 IKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFVL 268
IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 39 IKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVT 74
>gi|319938152|ref|ZP_08012550.1| cold shock DNA-binding protein [Coprobacillus sp. 29_1]
gi|319806673|gb|EFW03322.1| cold shock DNA-binding protein [Coprobacillus sp. 29_1]
Length = 68
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF G+GFI N+DVFVH I + +KTL EG+TVEFDI++GD+G
Sbjct: 4 GKVKWFKSDKGFGFITLEGENKDVFVHFSAINTDG----FKTLEEGQTVEFDIVEGDRGP 59
Query: 96 EAINVT 101
+A NVT
Sbjct: 60 QAANVT 65
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF G+GFI N+DVFVH I + +KTL EG+TVEFDI++GD+G
Sbjct: 4 GKVKWFKSDKGFGFITLEGENKDVFVHFSAINTDG----FKTLEEGQTVEFDIVEGDRGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|218189944|gb|EEC72371.1| hypothetical protein OsI_05633 [Oryza sativa Indica Group]
Length = 131
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
+ A + G VKWF+ G+GFI+ +ED+FVH IK + +++LAEGE VEF
Sbjct: 1 MAAAARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADG----FRSLAEGEQVEFA 56
Query: 88 IMQGDKGH-EAINVTGPDGRHVQ 109
I + + G +A++VTGPDG V+
Sbjct: 57 ISESEDGRTKAVDVTGPDGSFVK 79
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
+ A + G VKWF+ G+GFI+ +ED+FVH IK + +++LAEGE VEF
Sbjct: 1 MAAAARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADG----FRSLAEGEQVEFA 56
Query: 255 IMQGDKG 261
I + + G
Sbjct: 57 ISESEDG 63
>gi|372266435|ref|ZP_09502483.1| cold-shock protein CspD [Alteromonas sp. S89]
Length = 95
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ GYGFI ED+F H I+ Y+TL G+ V+FDI+QGDKG
Sbjct: 3 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAIQMEG----YRTLKAGQQVQFDIIQGDKG 58
Query: 95 HEAINVTGPD 104
+ A N++ D
Sbjct: 59 YHAANISAAD 68
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ GYGFI ED+F H I+ Y+TL G+ V+FDI+QGDKG
Sbjct: 3 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAIQMEG----YRTLKAGQQVQFDIIQGDKG 58
>gi|432105588|gb|ELK31782.1| Y-box-binding protein 2 [Myotis davidii]
Length = 275
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 66 IKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
IK NNPRK +++ +GETVEFD+++G+KG EA NVTGP G V+GS++A N
Sbjct: 43 IKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN 93
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 233 IKYNNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
IK NNPRK +++ +GETVEFD+++G+KG + V
Sbjct: 43 IKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANV 77
>gi|303285238|ref|XP_003061909.1| cold-shock DNA binding protein [Micromonas pusilla CCMP1545]
gi|226456320|gb|EEH53621.1| cold-shock DNA binding protein [Micromonas pusilla CCMP1545]
Length = 121
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
TK G VKWF+ + G+GFI +E++FVH I +++L E E VE+ + +
Sbjct: 2 TKTTGKVKWFNTQKGFGFITPDDGSEEIFVHQSAIHAEG----FRSLREEEPVEYTVEKS 57
Query: 92 DKGH-EAINVTGPDGRHVQGS 111
D G +A+ VTGPDG HVQG+
Sbjct: 58 DDGRAKAVEVTGPDGAHVQGA 78
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
TK G VKWF+ + G+GFI +E++FVH I +++L E E VE+ + +
Sbjct: 2 TKTTGKVKWFNTQKGFGFITPDDGSEEIFVHQSAIHAEG----FRSLREEEPVEYTVEKS 57
Query: 259 DKG 261
D G
Sbjct: 58 DDG 60
>gi|226322941|ref|ZP_03798459.1| hypothetical protein COPCOM_00713 [Coprococcus comes ATCC 27758]
gi|225208727|gb|EEG91081.1| cold-shock DNA-binding domain protein [Coprococcus comes ATCC
27758]
Length = 67
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI S+ EDVFVH I YK+L EG+ V FDI +G++G
Sbjct: 4 GTVKWFNAQKGYGFITNESTGEDVFVHFSGIAGEG----YKSLEEGQNVTFDITEGNRGL 59
Query: 96 EAINVT 101
+A+NVT
Sbjct: 60 QAVNVT 65
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI S+ EDVFVH I YK+L EG+ V FDI +G++G
Sbjct: 4 GTVKWFNAQKGYGFITNESTGEDVFVHFSGIAGEG----YKSLEEGQNVTFDITEGNRGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|90581455|ref|ZP_01237249.1| putative Cold shock-like protein [Photobacterium angustum S14]
gi|90437316|gb|EAS62513.1| putative Cold shock-like protein [Photobacterium angustum S14]
Length = 70
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GF+ + DVFVH + I +KTLAEG+ V FD+
Sbjct: 1 MSNKTLGLVKWFNEEKGFGFLTQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFDVE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A+NV G
Sbjct: 57 QGQKGLQAVNVIG 69
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GF+ + DVFVH + I +KTLAEG+ V FD+
Sbjct: 1 MSNKTLGLVKWFNEEKGFGFLTQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFDVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|335429927|ref|ZP_08556823.1| cold-shock DNA-binding protein family protein [Haloplasma
contractile SSD-17B]
gi|334889009|gb|EGM27303.1| cold-shock DNA-binding protein family protein [Haloplasma
contractile SSD-17B]
Length = 71
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
V G+VKWF+ + G+GFI ++ D+FVH I + YKTLAEG+ VEF++++G+
Sbjct: 6 VKGIVKWFNNQKGFGFIVREETDGDIFVHYSAIDVDG----YKTLAEGDQVEFELIEGEN 61
Query: 94 GHEAINV 100
G++A+NV
Sbjct: 62 GYQALNV 68
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
V G+VKWF+ + G+GFI ++ D+FVH I + YKTLAEG+ VEF++++G+
Sbjct: 6 VKGIVKWFNNQKGFGFIVREETDGDIFVHYSAIDVDG----YKTLAEGDQVEFELIEGEN 61
Query: 261 GNQFCFVLK 269
G Q V+K
Sbjct: 62 GYQALNVVK 70
>gi|295394500|ref|ZP_06804723.1| cold shock protein CspA [Brevibacterium mcbrellneri ATCC 49030]
gi|294972679|gb|EFG48531.1| cold shock protein CspA [Brevibacterium mcbrellneri ATCC 49030]
Length = 67
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI S++D+FVH I+ + Y++L EG+ VEF++ QGDKG
Sbjct: 4 GTVKWFNAEKGYGFITVDGSDQDIFVHYSEIQMDG----YRSLQEGQQVEFNVGQGDKGP 59
Query: 96 EAINVT 101
+A VT
Sbjct: 60 QAEGVT 65
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI S++D+FVH I+ + Y++L EG+ VEF++ QGDKG
Sbjct: 4 GTVKWFNAEKGYGFITVDGSDQDIFVHYSEIQMDG----YRSLQEGQQVEFNVGQGDKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|157364579|ref|YP_001471346.1| cold-shock DNA-binding domain-containing protein [Thermotoga
lettingae TMO]
gi|157315183|gb|ABV34282.1| putative cold-shock DNA-binding domain protein [Thermotoga
lettingae TMO]
Length = 67
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI T EDVFVH IK + +KTL EG+ VEF++ QG+KG
Sbjct: 4 GTVKWFDSKKGYGFI-TKEGGEDVFVHFSAIKTDG----FKTLREGQEVEFEVQQGNKGP 58
Query: 96 EAINVT 101
+A+NVT
Sbjct: 59 QAVNVT 64
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI T EDVFVH IK + +KTL EG+ VEF++ QG+KG
Sbjct: 4 GTVKWFDSKKGYGFI-TKEGGEDVFVHFSAIKTDG----FKTLREGQEVEFEVQQGNKGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|15896242|ref|NP_349591.1| cold shock protein [Clostridium acetobutylicum ATCC 824]
gi|337738197|ref|YP_004637644.1| cold shock protein [Clostridium acetobutylicum DSM 1731]
gi|384459708|ref|YP_005672128.1| Cold shock protein [Clostridium acetobutylicum EA 2018]
gi|15026046|gb|AAK80931.1|AE007796_1 Cold shock protein [Clostridium acetobutylicum ATCC 824]
gi|325510397|gb|ADZ22033.1| Cold shock protein [Clostridium acetobutylicum EA 2018]
gi|336292695|gb|AEI33829.1| cold shock protein [Clostridium acetobutylicum DSM 1731]
Length = 65
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T N DVFVH IK N +KTL EG+ VEFD+ +G KG
Sbjct: 3 GTVKWFNSQKGYGFITTQEGN-DVFVHYSGIKDNG----FKTLEEGQEVEFDLTEGQKGE 57
Query: 96 EAINV 100
+A+NV
Sbjct: 58 QAVNV 62
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T N DVFVH IK N +KTL EG+ VEFD+ +G KG
Sbjct: 3 GTVKWFNSQKGYGFITTQEGN-DVFVHYSGIKDNG----FKTLEEGQEVEFDLTEGQKGE 57
Query: 263 QFCFVLKN 270
Q V+K+
Sbjct: 58 QAVNVVKH 65
>gi|156394304|ref|XP_001636766.1| predicted protein [Nematostella vectensis]
gi|156223872|gb|EDO44703.1| predicted protein [Nematostella vectensis]
Length = 671
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF++ G+GFI EDVFVH IK + Y++L EGE V+ I DKG
Sbjct: 485 GSVKWFNLIKGFGFITRDDGGEDVFVHQSAIKASG----YRSLEEGEHVQLTISNSDKGK 540
Query: 96 EAINVTGPDGRHVQGSQFAANKPKYNRRK 124
AI VT P G +V+G+ N+ K RK
Sbjct: 541 VAICVTSPGGGNVKGAS-RKNRVKKGARK 568
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF++ G+GFI EDVFVH IK + Y++L EGE V+ I DKG
Sbjct: 485 GSVKWFNLIKGFGFITRDDGGEDVFVHQSAIKASG----YRSLEEGEHVQLTISNSDKG 539
>gi|401400662|ref|XP_003880829.1| lin-28 homolog B, related [Neospora caninum Liverpool]
gi|325115241|emb|CBZ50796.1| lin-28 homolog B, related [Neospora caninum Liverpool]
Length = 133
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G KWF K GYGFI T D+FVH I+ ++ LAEGE VEF I G+ G
Sbjct: 6 GTCKWFDSKKGYGFI-TAEDGTDLFVHQSEIRAEG----FRNLAEGEQVEFVIQTGNDGR 60
Query: 96 E-AINVTGPDGRHVQGS 111
+ A+NVTGP+G +VQG
Sbjct: 61 KKAVNVTGPNGSYVQGD 77
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G KWF K GYGFI T D+FVH I+ ++ LAEGE VEF I G+ G
Sbjct: 6 GTCKWFDSKKGYGFI-TAEDGTDLFVHQSEIRAEG----FRNLAEGEQVEFVIQTGNDG 59
>gi|283784399|ref|YP_003364264.1| cold shock-like protein [Citrobacter rodentium ICC168]
gi|62126861|gb|AAX64564.1| RNA chaperone, negative regulator of cspA transcription [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|282947853|emb|CBG87413.1| cold shock-like protein [Citrobacter rodentium ICC168]
Length = 79
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 63
Query: 88 IMQGDKGHEAINVT 101
I G KG A NVT
Sbjct: 64 ITNGAKGPSAANVT 77
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 63
Query: 255 IMQGDKG 261
I G KG
Sbjct: 64 ITNGAKG 70
>gi|284009245|emb|CBA76349.1| cold shock protein [Arsenophonus nasoniae]
Length = 70
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ +KV G VKWF+ G+GFI ++DVFVH IK +KTLAEG+ VEFDI
Sbjct: 1 MMSKVKGNVKWFNEAKGFGFITPEDGSKDVFVHFTAIKSEG----FKTLAEGQKVEFDIT 56
Query: 90 QGDKGHEAINVT 101
+G+KG AINV
Sbjct: 57 EGEKGPSAINVV 68
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ +KV G VKWF+ G+GFI ++DVFVH IK +KTLAEG+ VEFDI
Sbjct: 1 MMSKVKGNVKWFNEAKGFGFITPEDGSKDVFVHFTAIKSEG----FKTLAEGQKVEFDIT 56
Query: 257 QGDKG 261
+G+KG
Sbjct: 57 EGEKG 61
>gi|388500632|gb|AFK38382.1| unknown [Medicago truncatula]
Length = 134
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
+K+ G VKWF+ + G+GFI +E++FVH +I+ + +++LAEGE+VE+ I
Sbjct: 3 GSKLTGKVKWFNDQKGFGFITPDDGSEELFVHQSQIQTDG----FRSLAEGESVEYQIES 58
Query: 91 GDKGH-EAINVTGPDGRHVQ 109
+ G +A++VTGPDG VQ
Sbjct: 59 DNDGRSKAVSVTGPDGASVQ 78
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
+K+ G VKWF+ + G+GFI +E++FVH +I+ + +++LAEGE+VE+ I
Sbjct: 3 GSKLTGKVKWFNDQKGFGFITPDDGSEELFVHQSQIQTDG----FRSLAEGESVEYQIES 58
Query: 258 GDKG 261
+ G
Sbjct: 59 DNDG 62
>gi|94971209|ref|YP_593257.1| cold-shock DNA-binding protein family protein [Candidatus
Koribacter versatilis Ellin345]
gi|94553259|gb|ABF43183.1| cold-shock DNA-binding protein family [Candidatus Koribacter
versatilis Ellin345]
Length = 67
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI S+ EDVFVH I+ N Y+TL EGETVEFD+++G KG
Sbjct: 5 GTVKWFNGAKGYGFI-QRSTGEDVFVHFSAIQENG----YRTLNEGETVEFDLLKGPKGF 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAANV 64
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI S+ EDVFVH I+ N Y+TL EGETVEFD+++G KG
Sbjct: 5 GTVKWFNGAKGYGFI-QRSTGEDVFVHFSAIQENG----YRTLNEGETVEFDLLKGPKGF 59
Query: 263 QFCFVLK 269
Q V++
Sbjct: 60 QAANVVR 66
>gi|384254311|gb|EIE27785.1| CSD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 167
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
A+K G VKWF+ G+GFI ED+FVH I + +++LAEGE VEF +
Sbjct: 4 ASKATGTVKWFNSTKGFGFITPDDGGEDLFVHQTSIITDG----FRSLAEGEQVEFYVES 59
Query: 91 GDKGH-EAINVTGPDGRHVQG 110
GD G +A+ VTGP G QG
Sbjct: 60 GDDGRTKAVQVTGPGGAPPQG 80
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
A+K G VKWF+ G+GFI ED+FVH I + +++LAEGE VEF +
Sbjct: 4 ASKATGTVKWFNSTKGFGFITPDDGGEDLFVHQTSIITDG----FRSLAEGEQVEFYVES 59
Query: 258 GDKG 261
GD G
Sbjct: 60 GDDG 63
>gi|410911350|ref|XP_003969153.1| PREDICTED: protein lin-28 homolog A-like [Takifugu rubripes]
Length = 210
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 15/114 (13%)
Query: 24 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSS-------NEDVFVHSKRIKYNNPRKLYK 76
++E ++ GV KWF+++ G+GFI+ S N DVFVH ++ ++
Sbjct: 10 EEEEAAALSRGSGVCKWFNMRMGFGFISMSSRDGTPLDPNLDVFVHQSKLHMEG----FR 65
Query: 77 TLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYN-RRKAKANK 129
+L EGE ++F + KG EAI VTGPDG GS+ +PK +R++KA K
Sbjct: 66 SLREGEALDFTFKKSTKGLEAIRVTGPDGAPCLGSK---RRPKNALKRRSKAEK 116
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 186 ASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSS-------NEDVFVHSKRIKYNNP 238
S ++E ++ GV KWF+++ G+GFI+ S N DVFVH ++
Sbjct: 5 GSPQSEEEEAAALSRGSGVCKWFNMRMGFGFISMSSRDGTPLDPNLDVFVHQSKLHMEG- 63
Query: 239 RKLYKTLAEGETVEFDIMQGDKG 261
+++L EGE ++F + KG
Sbjct: 64 ---FRSLREGEALDFTFKKSTKG 83
>gi|41052630|dbj|BAD08139.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|41052743|dbj|BAD07599.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|125580606|gb|EAZ21537.1| hypothetical protein OsJ_05164 [Oryza sativa Japonica Group]
gi|187609561|gb|ACD13288.1| cold shock domain protein 1 [Oryza sativa Japonica Group]
gi|215767546|dbj|BAG99774.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 241
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI+ +ED+FVH IK + +++LAEGE VEF I + + G
Sbjct: 9 GTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADG----FRSLAEGEQVEFAISESEDGR 64
Query: 96 -EAINVTGPDGRHVQ 109
+A++VTGPDG V+
Sbjct: 65 TKAVDVTGPDGSFVK 79
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ G+GFI+ +ED+FVH IK + +++LAEGE VEF I + + G
Sbjct: 9 GTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADG----FRSLAEGEQVEFAISESEDG 63
>gi|125602074|gb|EAZ41399.1| hypothetical protein OsJ_25920 [Oryza sativa Japonica Group]
Length = 238
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
+V G VKWF G+GFI ED+FVH +K + Y++L +G+ VEF + G+
Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDG----YRSLNDGDVVEFSVGSGN 60
Query: 93 KGH-EAINVTGPDGRHV 108
G +A+NVT P GR V
Sbjct: 61 DGRTKAVNVTAPGGRAV 77
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
+V G VKWF G+GFI ED+FVH +K + Y++L +G+ VEF + G+
Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDG----YRSLNDGDVVEFSVGSGN 60
Query: 260 KG 261
G
Sbjct: 61 DG 62
>gi|410866549|ref|YP_006981160.1| Cold shock-like protein CspA [Propionibacterium acidipropionici
ATCC 4875]
gi|410823190|gb|AFV89805.1| Cold shock-like protein CspA [Propionibacterium acidipropionici
ATCC 4875]
Length = 68
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATP-SSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWFS + GYGFIA +++EDVFVH K I+ +KTL EG+ VEFDI +G KG
Sbjct: 4 GTVKWFSPEKGYGFIAVDGNASEDVFVHWKSIEVEG----FKTLDEGQRVEFDITEGRKG 59
Query: 95 HEAINV 100
+A NV
Sbjct: 60 QQAENV 65
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 203 GVVKWFSVKSGYGFIATP-SSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWFS + GYGFIA +++EDVFVH K I+ +KTL EG+ VEFDI +G KG
Sbjct: 4 GTVKWFSPEKGYGFIAVDGNASEDVFVHWKSIEVEG----FKTLDEGQRVEFDITEGRKG 59
Query: 262 NQ 263
Q
Sbjct: 60 QQ 61
>gi|398796672|ref|ZP_10556159.1| cold shock protein [Pantoea sp. YR343]
gi|398202674|gb|EJM89513.1| cold shock protein [Pantoea sp. YR343]
Length = 69
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQSVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQSVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|167467804|ref|ZP_02332508.1| major cold shock protein Cspa1 [Yersinia pestis FV-1]
Length = 70
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ + G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNTMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFSIE 56
Query: 90 QGDKGHEAINVT 101
QG KG A+NV
Sbjct: 57 QGQKGPSAVNVV 68
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ + G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNTMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGQKG 61
>gi|304396175|ref|ZP_07378057.1| cold-shock DNA-binding domain protein [Pantoea sp. aB]
gi|308187103|ref|YP_003931234.1| cold shock-like protein cspC [Pantoea vagans C9-1]
gi|372277328|ref|ZP_09513364.1| cold shock-like protein cspC [Pantoea sp. SL1_M5]
gi|381404303|ref|ZP_09928987.1| cold shock-like protein cspC [Pantoea sp. Sc1]
gi|390434813|ref|ZP_10223351.1| cold shock-like protein cspC [Pantoea agglomerans IG1]
gi|440759587|ref|ZP_20938720.1| Cold shock protein CspC [Pantoea agglomerans 299R]
gi|304356544|gb|EFM20909.1| cold-shock DNA-binding domain protein [Pantoea sp. aB]
gi|308057613|gb|ADO09785.1| Cold shock-like protein cspC [Pantoea vagans C9-1]
gi|380737502|gb|EIB98565.1| cold shock-like protein cspC [Pantoea sp. Sc1]
gi|436426656|gb|ELP24360.1| Cold shock protein CspC [Pantoea agglomerans 299R]
Length = 69
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQSVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQSVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|410636136|ref|ZP_11346739.1| cold shock protein [Glaciecola lipolytica E3]
gi|410144313|dbj|GAC13944.1| cold shock protein [Glaciecola lipolytica E3]
Length = 68
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I + YKTL EG+ V FDI QG
Sbjct: 2 SKSTGIVKWFNAEKGFGFITPDNGGSDVFVHFRAIASDG----YKTLNEGQQVTFDIEQG 57
Query: 92 DKGHEAINVT 101
KG +A NVT
Sbjct: 58 QKGPQAANVT 67
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I + YKTL EG+ V FDI QG
Sbjct: 2 SKSTGIVKWFNAEKGFGFITPDNGGSDVFVHFRAIASDG----YKTLNEGQQVTFDIEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|309812766|ref|ZP_07706505.1| cold shock-like protein CspE [Dermacoccus sp. Ellin185]
gi|308433283|gb|EFP57176.1| cold shock-like protein CspE [Dermacoccus sp. Ellin185]
Length = 67
Score = 67.4 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI DVFVH I+ N Y++L EG+ VEF+I QGDKG
Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFVHFSAIQTNG----YRSLDEGQRVEFEITQGDKGP 59
Query: 96 EAINVTG 102
+A NVT
Sbjct: 60 QASNVTA 66
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI DVFVH I+ N Y++L EG+ VEF+I QGDKG
Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFVHFSAIQTNG----YRSLDEGQRVEFEITQGDKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|149046920|gb|EDL99668.1| rCG58531, isoform CRA_b [Rattus norvegicus]
Length = 316
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 36 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
G KWF+V+ G+GFI+ S DVFVH ++ +++L EGE VEF
Sbjct: 75 GHCKWFNVRMGFGFISMISREGNPLDIPVDVFVHQSKLFMEG----FRSLKEGEPVEFTF 130
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRRNNRLFGVKYQ 146
+ KG E+I VTGP G GS+ +RK KA++ +R+ ++++ V+ +
Sbjct: 131 KKSPKGLESIRVTGPGGNPCLGSERRPKGKTLQKRKPKADRWRRQDLLMDQMWTVREE 188
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
G KWF+V+ G+GFI+ S DVFVH ++ +++L EGE VEF
Sbjct: 75 GHCKWFNVRMGFGFISMISREGNPLDIPVDVFVHQSKLFMEG----FRSLKEGEPVEFTF 130
Query: 256 MQGDKG 261
+ KG
Sbjct: 131 KKSPKG 136
>gi|326523669|dbj|BAJ93005.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 231
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ +V G VKWF+V G+GFI+ +ED+FVH IK + Y++L E + VEFD++
Sbjct: 1 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEFDVI 56
Query: 90 QGDKGH-EAINVTGPDGRHVQG 110
GD G +A +VT P G + G
Sbjct: 57 TGDDGRTKASDVTAPGGGALSG 78
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ +V G VKWF+V G+GFI+ +ED+FVH IK + Y++L E + VEFD++
Sbjct: 1 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEFDVI 56
Query: 257 QGDKG 261
GD G
Sbjct: 57 TGDDG 61
>gi|225427973|ref|XP_002277628.1| PREDICTED: glycine-rich protein 2-like [Vitis vinifera]
Length = 214
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
++V G VKWF+ + G+GFI +D+FVH I+ +++L EGE VEF +
Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEG----FRSLGEGEAVEFVVESS 57
Query: 92 DKGH-EAINVTGPDGRHVQ 109
D G +A++VTGPDG VQ
Sbjct: 58 DDGRTKAVDVTGPDGNPVQ 76
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
++V G VKWF+ + G+GFI +D+FVH I+ +++L EGE VEF +
Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEG----FRSLGEGEAVEFVVESS 57
Query: 259 DKG 261
D G
Sbjct: 58 DDG 60
>gi|157126269|ref|XP_001654567.1| hypothetical protein AaeL_AAEL002060 [Aedes aegypti]
gi|108882539|gb|EAT46764.1| AAEL002060-PA [Aedes aegypti]
Length = 192
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 20 NESPKK--EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKT 77
+ESP K + + + ++ G VKWF+ K G+GFI + ED+FVH I N K+
Sbjct: 18 SESPSKPQDSIKRSKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKS 77
Query: 78 LAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
+ +GE VEF ++ A VTGP + V+GS F A + + R
Sbjct: 78 IGDGEIVEFGLI-------ASKVTGPGFKPVKGSPFVAKRGGHRSR 116
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 187 SESPKK--EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKT 244
SESP K + + + ++ G VKWF+ K G+GFI + ED+FVH I N K+
Sbjct: 18 SESPSKPQDSIKRSKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKS 77
Query: 245 LAEGETVEFDIM 256
+ +GE VEF ++
Sbjct: 78 IGDGEIVEFGLI 89
>gi|147856673|emb|CAN81359.1| hypothetical protein VITISV_040408 [Vitis vinifera]
Length = 219
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
++V G VKWF+ + G+GFI +D+FVH I+ +++L EGE VEF +
Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEG----FRSLGEGEAVEFVVESS 57
Query: 92 DKGH-EAINVTGPDGRHVQ 109
D G +A++VTGPDG VQ
Sbjct: 58 DDGRTKAVDVTGPDGNPVQ 76
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
++V G VKWF+ + G+GFI +D+FVH I+ +++L EGE VEF +
Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEG----FRSLGEGEAVEFVVESS 57
Query: 259 DKG 261
D G
Sbjct: 58 DDG 60
>gi|125838843|ref|XP_001340141.1| PREDICTED: protein lin-28 homolog A-like [Danio rerio]
Length = 198
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 36 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
GV KWF+V+ G+GF++ + + DVFVH ++ +++L EGE+VEF
Sbjct: 33 GVCKWFNVRMGFGFLSMNTRDGVPLETPVDVFVHQSKLHMEG----FRSLKEGESVEFTF 88
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
+ KG E++ VTGP G H GS +R+AK ++
Sbjct: 89 KKSSKGLESVRVTGPGGAHCVGSDRRPKGKSVQKRRAKGDR 129
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
GV KWF+V+ G+GF++ + + DVFVH ++ +++L EGE+VEF
Sbjct: 33 GVCKWFNVRMGFGFLSMNTRDGVPLETPVDVFVHQSKLHMEG----FRSLKEGESVEFTF 88
Query: 256 MQGDKG 261
+ KG
Sbjct: 89 KKSSKG 94
>gi|76577745|gb|ABA54143.1| putative glycine-rich protein [Picea glauca]
Length = 156
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF GYGFI +ED+FVH I N +++LAEGE VE+ + + G
Sbjct: 8 GKVKWFDSTKGYGFITPDDGSEDLFVHQTSIHSNG----FRSLAEGEAVEYTVEHENGGR 63
Query: 96 -EAINVTGPDGRHVQG 110
+A++VTGPDG VQG
Sbjct: 64 TKALDVTGPDGAFVQG 79
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF GYGFI +ED+FVH I N +++LAEGE VE+ + + G
Sbjct: 8 GKVKWFDSTKGYGFITPDDGSEDLFVHQTSIHSNG----FRSLAEGEAVEYTVEHENGG 62
>gi|116781927|gb|ABK22299.1| unknown [Picea sitchensis]
gi|148909032|gb|ABR17619.1| unknown [Picea sitchensis]
gi|224285091|gb|ACN40273.1| unknown [Picea sitchensis]
Length = 205
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF GYGFI +ED+FVH I N +++LAEGE VE+ + + G
Sbjct: 8 GKVKWFDSTKGYGFITPDDGSEDLFVHQTSIHSNG----FRSLAEGEAVEYTVEHENGGR 63
Query: 96 -EAINVTGPDGRHVQG 110
+A++VTGPDG VQG
Sbjct: 64 TKALDVTGPDGAFVQG 79
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF GYGFI +ED+FVH I N +++LAEGE VE+ + + G
Sbjct: 8 GKVKWFDSTKGYGFITPDDGSEDLFVHQTSIHSNG----FRSLAEGEAVEYTVEHENGG 62
>gi|348526091|ref|XP_003450554.1| PREDICTED: protein lin-28 homolog A-like [Oreochromis niloticus]
Length = 202
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 20 NESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPR 72
+E P E + GV KWF+V+ G+GF++ S DVFVH ++
Sbjct: 18 DEGPSPEENSESFHGVGVCKWFNVRMGFGFLSMTSREGVPLEEPVDVFVHQSKLHMEG-- 75
Query: 73 KLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
+++L EGE VEF + KG E+ VTGP G H GS+ K +R++K ++
Sbjct: 76 --FRSLKEGEAVEFTFKKSSKGLESQRVTGPGGIHCVGSERRPKGKKVQKRRSKGDR 130
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
GV KWF+V+ G+GF++ S DVFVH ++ +++L EGE VEF
Sbjct: 34 GVCKWFNVRMGFGFLSMTSREGVPLEEPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 89
Query: 256 MQGDKG 261
+ KG
Sbjct: 90 KKSSKG 95
>gi|238784838|ref|ZP_04628839.1| Cold shock-like protein cspI [Yersinia bercovieri ATCC 43970]
gi|238714254|gb|EEQ06265.1| Cold shock-like protein cspI [Yersinia bercovieri ATCC 43970]
Length = 70
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI+ ++DVFVH I+ + YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGTD----YKTLDEGQNVEFSIE 56
Query: 90 QGDKGHEAINVT 101
QG KG A+NV
Sbjct: 57 QGQKGPSAVNVV 68
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI+ ++DVFVH I+ + YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGTD----YKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGQKG 61
>gi|226227592|ref|YP_002761698.1| cold shock protein [Gemmatimonas aurantiaca T-27]
gi|226090783|dbj|BAH39228.1| cold shock protein [Gemmatimonas aurantiaca T-27]
Length = 69
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
+ G VKWF+ G+GFI +D FVH I+ N +K+L EGETVEFDI+QG
Sbjct: 2 RTTGTVKWFNDAKGFGFITPSDGQKDCFVHHSAIQGNG----FKSLTEGETVEFDIVQGQ 57
Query: 93 KGHEAINVT 101
KG A NVT
Sbjct: 58 KGPAAENVT 66
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
+ G VKWF+ G+GFI +D FVH I+ N +K+L EGETVEFDI+QG
Sbjct: 2 RTTGTVKWFNDAKGFGFITPSDGQKDCFVHHSAIQGNG----FKSLTEGETVEFDIVQGQ 57
Query: 260 KG 261
KG
Sbjct: 58 KG 59
>gi|393761650|ref|ZP_10350287.1| cold shock domain-containing protein [Alishewanella agri BL06]
gi|392607660|gb|EIW90534.1| cold shock domain-containing protein [Alishewanella agri BL06]
Length = 70
Score = 67.0 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
KV GVVKWF+ G+GFI + D FVH + I+ + YKTL EG+ V F+I QG
Sbjct: 3 KVTGVVKWFNADKGFGFITQDNGGADAFVHFRAIQTDG----YKTLNEGQKVAFEIEQGQ 58
Query: 93 KGHEAINVT 101
KG +A NVT
Sbjct: 59 KGPQAANVT 67
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
KV GVVKWF+ G+GFI + D FVH + I+ + YKTL EG+ V F+I QG
Sbjct: 3 KVTGVVKWFNADKGFGFITQDNGGADAFVHFRAIQTDG----YKTLNEGQKVAFEIEQGQ 58
Query: 260 KGNQ 263
KG Q
Sbjct: 59 KGPQ 62
>gi|339477759|ref|YP_004706579.1| putative major cold shock protein [Candidatus Moranella endobia
PCIT]
gi|338172310|gb|AEI74711.1| putative major cold shock protein [Candidatus Moranella endobia
PCIT]
Length = 72
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
KV G+VKWF G+GFI + DVFVH I+ NN +KTL EG+ VEF I QG
Sbjct: 6 KVTGLVKWFDAGKGFGFITPTDGSRDVFVHFSAIQSNN----FKTLDEGQRVEFTIEQGQ 61
Query: 93 KGHEAINV 100
KG A NV
Sbjct: 62 KGPSAANV 69
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
KV G+VKWF G+GFI + DVFVH I+ NN +KTL EG+ VEF I QG
Sbjct: 6 KVTGLVKWFDAGKGFGFITPTDGSRDVFVHFSAIQSNN----FKTLDEGQRVEFTIEQGQ 61
Query: 260 KG 261
KG
Sbjct: 62 KG 63
>gi|50121319|ref|YP_050486.1| cold shock-like protein CspC [Pectobacterium atrosepticum SCRI1043]
gi|85059298|ref|YP_455000.1| cold shock-like protein CspC [Sodalis glossinidius str.
'morsitans']
gi|227111514|ref|ZP_03825170.1| cold shock-like protein CspC [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227327800|ref|ZP_03831824.1| cold shock-like protein CspC [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|253688307|ref|YP_003017497.1| cold-shock DNA-binding domain-containing protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|261821484|ref|YP_003259590.1| cold shock-like protein CspC [Pectobacterium wasabiae WPP163]
gi|403058417|ref|YP_006646634.1| cold shock-like protein CspC [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|421079660|ref|ZP_15540598.1| Cold shock-like protein CspC [Pectobacterium wasabiae CFBP 3304]
gi|49611845|emb|CAG75294.1| cold shock protein [Pectobacterium atrosepticum SCRI1043]
gi|84779818|dbj|BAE74595.1| cold shock protein [Sodalis glossinidius str. 'morsitans']
gi|251754885|gb|ACT12961.1| cold-shock DNA-binding domain protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|261605497|gb|ACX87983.1| cold-shock DNA-binding domain protein [Pectobacterium wasabiae
WPP163]
gi|385871724|gb|AFI90244.1| Cold shock-like protein cspE [Pectobacterium sp. SCC3193]
gi|401705746|gb|EJS95931.1| Cold shock-like protein CspC [Pectobacterium wasabiae CFBP 3304]
gi|402805743|gb|AFR03381.1| cold shock-like protein CspC [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 69
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPSAVNVT 67
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|85058123|ref|YP_453825.1| major cold shock protein [Sodalis glossinidius str. 'morsitans']
gi|400405035|ref|YP_006587894.1| cold shock protein [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|84778643|dbj|BAE73420.1| major cold shock protein [Sodalis glossinidius str. 'morsitans']
gi|400363398|gb|AFP84466.1| cold shock protein [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 70
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ KV G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKVTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQRVEFTIE 56
Query: 90 QGDKGHEAINV 100
QG KG A NV
Sbjct: 57 QGQKGPSAANV 67
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ KV G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKVTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQRVEFTIE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGQKG 61
>gi|387872076|ref|YP_005803453.1| cold shock-like protein cspE (CSP-E) [Erwinia pyrifoliae DSM 12163]
gi|283479166|emb|CAY75082.1| Cold shock-like protein cspE (CSP-E) [Erwinia pyrifoliae DSM 12163]
Length = 79
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 63
Query: 88 IMQGDKGHEAINVT 101
I G KG A NV
Sbjct: 64 ITNGAKGPSAANVA 77
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 63
Query: 255 IMQGDKG 261
I G KG
Sbjct: 64 ITNGAKG 70
>gi|156933606|ref|YP_001437522.1| hypothetical protein ESA_01428 [Cronobacter sakazakii ATCC BAA-894]
gi|156531860|gb|ABU76686.1| hypothetical protein ESA_01428 [Cronobacter sakazakii ATCC BAA-894]
Length = 90
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 17 PSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYK 76
P AN++ E + K+ G VKWF+ G+GFI ++DVFVH I+ N +K
Sbjct: 10 PRANKTI--EGICEMAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FK 63
Query: 77 TLAEGETVEFDIMQGDKGHEAINVT 101
TLAEG+ VEF+I G KG A+NV
Sbjct: 64 TLAEGQNVEFEIQDGQKGPAAVNVV 88
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 252
E + K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VE
Sbjct: 17 EGICEMAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVE 72
Query: 253 FDIMQGDKG 261
F+I G KG
Sbjct: 73 FEIQDGQKG 81
>gi|283785560|ref|YP_003365425.1| cold shock-like protein CspC [Citrobacter rodentium ICC168]
gi|365971040|ref|YP_004952601.1| cold shock-like protein CspC [Enterobacter cloacae EcWSU1]
gi|282949014|emb|CBG88617.1| cold shock-like protein CspC [Citrobacter rodentium ICC168]
gi|365749953|gb|AEW74180.1| Cold shock-like protein CspC [Enterobacter cloacae EcWSU1]
Length = 71
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 4 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 59
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 60 QKGPAAVNVT 69
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 4 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 59
Query: 259 DKG 261
KG
Sbjct: 60 QKG 62
>gi|308270407|emb|CBX27019.1| Major cold shock protein [uncultured Desulfobacterium sp.]
Length = 66
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWFS K GYGFI + EDVFVH I +KTL+EGE V FDI QG+KG
Sbjct: 4 GIVKWFSNKKGYGFIEQENG-EDVFVHHSAINGAG----FKTLSEGEKVTFDIEQGEKGP 58
Query: 96 EAINVT 101
A+NVT
Sbjct: 59 AAVNVT 64
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G+VKWFS K GYGFI + EDVFVH I +KTL+EGE V FDI QG+KG
Sbjct: 4 GIVKWFSNKKGYGFIEQENG-EDVFVHHSAINGAG----FKTLSEGEKVTFDIEQGEKG 57
>gi|392971501|ref|ZP_10336895.1| cold shock protein CspA [Staphylococcus equorum subsp. equorum Mu2]
gi|403047185|ref|ZP_10902653.1| cold shock protein CspA [Staphylococcus sp. OJ82]
gi|392510388|emb|CCI60177.1| cold shock protein CspA [Staphylococcus equorum subsp. equorum Mu2]
gi|402762719|gb|EJX16813.1| cold shock protein CspA [Staphylococcus sp. OJ82]
Length = 66
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI + N+DVFVH I + YK+L EGETVEFDI+ GD+G
Sbjct: 4 GTVKWFNADKGFGFIEVEN-NDDVFVHFSAIN----SEGYKSLEEGETVEFDIVDGDRGK 58
Query: 96 EAINVT 101
+A NV
Sbjct: 59 QAANVN 64
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFI + N+DVFVH I + YK+L EGETVEFDI+ GD+G
Sbjct: 4 GTVKWFNADKGFGFIEVEN-NDDVFVHFSAIN----SEGYKSLEEGETVEFDIVDGDRGK 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|188584960|ref|YP_001916505.1| cold-shock DNA-binding protein family [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349647|gb|ACB83917.1| cold-shock DNA-binding protein family [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 68
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI EDVFVH I+ ++ +KTL EG+ VEF++ QGDKG
Sbjct: 3 GTVKWFDPKKGYGFIEKEDDGEDVFVHFSAIQ----QEGFKTLEEGQKVEFEVTQGDKGP 58
Query: 96 EAINVTGPDG 105
+A NV +G
Sbjct: 59 QAENVVVMEG 68
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI EDVFVH I+ ++ +KTL EG+ VEF++ QGDKG
Sbjct: 3 GTVKWFDPKKGYGFIEKEDDGEDVFVHFSAIQ----QEGFKTLEEGQKVEFEVTQGDKGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|400406444|ref|YP_006589192.1| cold shock protein [secondary endosymbiont of Heteropsylla cubana]
gi|400364697|gb|AFP85764.1| cold shock protein [secondary endosymbiont of Heteropsylla cubana]
Length = 69
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58
Query: 93 KGHEAINVT 101
KG A+NVT
Sbjct: 59 KGPSAVNVT 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQ 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|398799385|ref|ZP_10558676.1| cold shock protein [Pantoea sp. GM01]
gi|398098801|gb|EJL89081.1| cold shock protein [Pantoea sp. GM01]
Length = 69
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|225850576|ref|YP_002730810.1| hypothetical protein PERMA_1024 [Persephonella marina EX-H1]
gi|225644787|gb|ACO02973.1| conserved domain protein [Persephonella marina EX-H1]
Length = 68
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
++ G VKWF+ K GYGFI DVFVH I N +KTL EG+ VEFD++Q D
Sbjct: 2 RLTGTVKWFNSKKGYGFITRDDGQGDVFVHFSAIAENG----FKTLEEGQKVEFDVVQED 57
Query: 93 KGHEAINV 100
KG +A NV
Sbjct: 58 KGQKAQNV 65
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
++ G VKWF+ K GYGFI DVFVH I N +KTL EG+ VEFD++Q D
Sbjct: 2 RLTGTVKWFNSKKGYGFITRDDGQGDVFVHFSAIAENG----FKTLEEGQKVEFDVVQED 57
Query: 260 KGNQFCFVLK 269
KG + V+K
Sbjct: 58 KGQKAQNVVK 67
>gi|45441309|ref|NP_992848.1| cold shock-like protein CspC [Yersinia pestis biovar Microtus str.
91001]
gi|51595960|ref|YP_070151.1| cold shock-like protein CspC [Yersinia pseudotuberculosis IP 32953]
gi|108807116|ref|YP_651032.1| cold shock-like protein CspC [Yersinia pestis Antiqua]
gi|108812537|ref|YP_648304.1| cold shock-like protein CspC [Yersinia pestis Nepal516]
gi|123442059|ref|YP_001006042.1| cold shock-like protein CspC [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145598663|ref|YP_001162739.1| cold shock-like protein CspC [Yersinia pestis Pestoides F]
gi|149366301|ref|ZP_01888336.1| cold shock protein [Yersinia pestis CA88-4125]
gi|157371062|ref|YP_001479051.1| cold shock-like protein CspC [Serratia proteamaculans 568]
gi|165927969|ref|ZP_02223801.1| conserved domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166010855|ref|ZP_02231753.1| conserved domain protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211069|ref|ZP_02237104.1| conserved domain protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167420033|ref|ZP_02311786.1| conserved domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167427111|ref|ZP_02318864.1| conserved domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170024699|ref|YP_001721204.1| cold shock-like protein CspC [Yersinia pseudotuberculosis YPIII]
gi|186895059|ref|YP_001872171.1| cold shock-like protein CspC [Yersinia pseudotuberculosis PB1/+]
gi|218928871|ref|YP_002346746.1| cold shock-like protein CspC [Yersinia pestis CO92]
gi|229894196|ref|ZP_04509379.1| stress protein, member of the CspA-family [Yersinia pestis
Pestoides A]
gi|229897121|ref|ZP_04512277.1| stress protein, member of the CspA-family [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229897848|ref|ZP_04512999.1| stress protein, member of the CspA-family [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902921|ref|ZP_04518038.1| stress protein, member of the CspA-family [Yersinia pestis
Nepal516]
gi|257168081|ref|YP_003169746.1| cold shock-like protein CspC [Yersinia pestis KIM10+]
gi|270262270|ref|ZP_06190542.1| Cold shock-like protein CspC [Serratia odorifera 4Rx13]
gi|270486706|ref|ZP_06203780.1| transcriptional repressor activity CueR [Yersinia pestis KIM D27]
gi|284988616|ref|YP_003422337.1| cold shock protein [Yersinia pseudotuberculosis IP 31758]
gi|293395700|ref|ZP_06639982.1| MerR family copper efflux regulator [Serratia odorifera DSM 4582]
gi|322833600|ref|YP_004213627.1| cold-shock protein [Rahnella sp. Y9602]
gi|332162025|ref|YP_004298602.1| cold shock-like protein CspC [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|333927766|ref|YP_004501345.1| cold-shock DNA-binding domain-containing protein [Serratia sp.
AS12]
gi|333932720|ref|YP_004506298.1| cold-shock DNA-binding domain-containing protein [Serratia
plymuthica AS9]
gi|354597690|ref|ZP_09015707.1| cold-shock DNA-binding domain protein [Brenneria sp. EniD312]
gi|383190767|ref|YP_005200895.1| cold shock protein [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|383813892|ref|ZP_09969315.1| cold shock-like protein CspC [Serratia sp. M24T3]
gi|384140364|ref|YP_005523066.1| cold shock-like protein CspC [Yersinia pestis A1122]
gi|384258777|ref|YP_005402711.1| cold shock-like protein CspC [Rahnella aquatilis HX2]
gi|384415017|ref|YP_005624379.1| stress protein, member of the CspA-family [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|386329589|ref|YP_006025759.1| cold-shock protein [Serratia sp. AS13]
gi|386825573|ref|ZP_10112695.1| cold shock-like protein CspC [Serratia plymuthica PRI-2C]
gi|418242437|ref|ZP_12868948.1| cold shock-like protein CspC [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420258835|ref|ZP_14761560.1| cold shock-like protein CspC [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|420546516|ref|ZP_15044496.1| cold shock-like protein CspC [Yersinia pestis PY-01]
gi|420551848|ref|ZP_15049268.1| cold shock-like protein CspC [Yersinia pestis PY-02]
gi|420557404|ref|ZP_15054158.1| cold shock-like protein CspC [Yersinia pestis PY-03]
gi|420562900|ref|ZP_15059001.1| cold shock-like protein CspC [Yersinia pestis PY-04]
gi|420567947|ref|ZP_15063579.1| cold shock-like protein CspC [Yersinia pestis PY-05]
gi|420573628|ref|ZP_15068729.1| cold shock-like protein CspC [Yersinia pestis PY-06]
gi|420578925|ref|ZP_15073534.1| cold shock-like protein CspC [Yersinia pestis PY-07]
gi|420584249|ref|ZP_15078366.1| cold shock-like protein CspC [Yersinia pestis PY-08]
gi|420589453|ref|ZP_15083052.1| cold shock-like protein CspC [Yersinia pestis PY-09]
gi|420594756|ref|ZP_15087824.1| cold shock-like protein CspC [Yersinia pestis PY-10]
gi|420600467|ref|ZP_15092925.1| cold shock-like protein CspC [Yersinia pestis PY-11]
gi|420605872|ref|ZP_15097771.1| cold shock-like protein CspC [Yersinia pestis PY-12]
gi|420611238|ref|ZP_15102615.1| cold shock-like protein CspC [Yersinia pestis PY-13]
gi|420616609|ref|ZP_15107345.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|420621927|ref|ZP_15112067.1| cold shock-like protein CspC [Yersinia pestis PY-15]
gi|420627018|ref|ZP_15116686.1| cold shock-like protein CspC [Yersinia pestis PY-16]
gi|420632220|ref|ZP_15121375.1| cold shock-like protein CspC [Yersinia pestis PY-19]
gi|420637334|ref|ZP_15125959.1| cold shock-like protein CspC [Yersinia pestis PY-25]
gi|420642876|ref|ZP_15130983.1| cold shock-like protein CspC [Yersinia pestis PY-29]
gi|420648070|ref|ZP_15135717.1| cold shock-like protein CspC [Yersinia pestis PY-32]
gi|420653724|ref|ZP_15140792.1| cold shock-like protein CspC [Yersinia pestis PY-34]
gi|420659203|ref|ZP_15145719.1| cold shock-like protein CspC [Yersinia pestis PY-36]
gi|420664522|ref|ZP_15150480.1| cold shock-like protein CspC [Yersinia pestis PY-42]
gi|420669427|ref|ZP_15154930.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|420674765|ref|ZP_15159789.1| cold shock-like protein CspC [Yersinia pestis PY-46]
gi|420680361|ref|ZP_15164856.1| cold shock-like protein CspC [Yersinia pestis PY-47]
gi|420685643|ref|ZP_15169579.1| cold shock-like protein CspC [Yersinia pestis PY-48]
gi|420690812|ref|ZP_15174148.1| cold shock-like protein CspC [Yersinia pestis PY-52]
gi|420696622|ref|ZP_15179236.1| cold shock-like protein CspC [Yersinia pestis PY-53]
gi|420702139|ref|ZP_15183847.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|420707906|ref|ZP_15188658.1| cold shock-like protein CspC [Yersinia pestis PY-55]
gi|420713315|ref|ZP_15193504.1| cold shock-like protein CspC [Yersinia pestis PY-56]
gi|420718739|ref|ZP_15198235.1| cold shock-like protein CspC [Yersinia pestis PY-58]
gi|420724302|ref|ZP_15203048.1| cold shock-like protein CspC [Yersinia pestis PY-59]
gi|420729887|ref|ZP_15208045.1| cold shock-like protein CspC [Yersinia pestis PY-60]
gi|420734947|ref|ZP_15212622.1| cold shock-like protein CspC [Yersinia pestis PY-61]
gi|420740414|ref|ZP_15217544.1| cold shock-like protein CspC [Yersinia pestis PY-63]
gi|420745900|ref|ZP_15222298.1| cold shock-like protein CspC [Yersinia pestis PY-64]
gi|420751559|ref|ZP_15227209.1| cold shock-like protein CspC [Yersinia pestis PY-65]
gi|420756999|ref|ZP_15231808.1| cold shock-like protein CspC [Yersinia pestis PY-66]
gi|420762701|ref|ZP_15236573.1| cold shock-like protein CspC [Yersinia pestis PY-71]
gi|420767956|ref|ZP_15241312.1| cold shock-like protein CspC [Yersinia pestis PY-72]
gi|420772928|ref|ZP_15245783.1| cold shock-like protein CspC [Yersinia pestis PY-76]
gi|420778375|ref|ZP_15250621.1| cold shock-like protein CspC [Yersinia pestis PY-88]
gi|420783930|ref|ZP_15255483.1| cold shock-like protein CspC [Yersinia pestis PY-89]
gi|420789193|ref|ZP_15260159.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|420794678|ref|ZP_15265101.1| cold shock-like protein CspC [Yersinia pestis PY-91]
gi|420799727|ref|ZP_15269639.1| cold shock-like protein CspC [Yersinia pestis PY-92]
gi|420805131|ref|ZP_15274515.1| cold shock-like protein CspC [Yersinia pestis PY-93]
gi|420810423|ref|ZP_15279291.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|420816090|ref|ZP_15284386.1| cold shock-like protein CspC [Yersinia pestis PY-95]
gi|420821282|ref|ZP_15289071.1| cold shock-like protein CspC [Yersinia pestis PY-96]
gi|420826373|ref|ZP_15293630.1| cold shock-like protein CspC [Yersinia pestis PY-98]
gi|420832148|ref|ZP_15298851.1| cold shock-like protein CspC [Yersinia pestis PY-99]
gi|420836965|ref|ZP_15303197.1| cold shock-like protein CspC [Yersinia pestis PY-100]
gi|420842123|ref|ZP_15307872.1| cold shock-like protein CspC [Yersinia pestis PY-101]
gi|420847766|ref|ZP_15312955.1| cold shock-like protein CspC [Yersinia pestis PY-102]
gi|420853232|ref|ZP_15317708.1| cold shock-like protein CspC [Yersinia pestis PY-103]
gi|420858694|ref|ZP_15322406.1| cold shock-like protein CspC [Yersinia pestis PY-113]
gi|421763221|ref|ZP_16200016.1| cold shock-like protein CspC [Yersinia pestis INS]
gi|421784008|ref|ZP_16220451.1| cold shock-like protein cspC [Serratia plymuthica A30]
gi|440231282|ref|YP_007345075.1| cold shock protein [Serratia marcescens FGI94]
gi|448242600|ref|YP_007406653.1| stress protein, member of the CspA-family [Serratia marcescens WW4]
gi|45436169|gb|AAS61725.1| cold shock protein [Yersinia pestis biovar Microtus str. 91001]
gi|51589242|emb|CAH20863.1| cold shock protein [Yersinia pseudotuberculosis IP 32953]
gi|108776185|gb|ABG18704.1| cold-shock DNA-binding protein family [Yersinia pestis Nepal516]
gi|108779029|gb|ABG13087.1| cold-shock DNA-binding protein family [Yersinia pestis Antiqua]
gi|115347482|emb|CAL20388.1| cold shock protein [Yersinia pestis CO92]
gi|122089020|emb|CAL11834.1| cold shock-like protein cspC1 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145210359|gb|ABP39766.1| cold-shock DNA-binding protein family [Yersinia pestis Pestoides F]
gi|149292714|gb|EDM42788.1| cold shock protein [Yersinia pestis CA88-4125]
gi|157322826|gb|ABV41923.1| cold-shock DNA-binding domain protein [Serratia proteamaculans 568]
gi|165920026|gb|EDR37327.1| conserved domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990199|gb|EDR42500.1| conserved domain protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208249|gb|EDR52729.1| conserved domain protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961728|gb|EDR57749.1| conserved domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167053904|gb|EDR63736.1| conserved domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169751233|gb|ACA68751.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
YPIII]
gi|186698085|gb|ACC88714.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
PB1/+]
gi|229680368|gb|EEO76467.1| stress protein, member of the CspA-family [Yersinia pestis
Nepal516]
gi|229688889|gb|EEO80954.1| stress protein, member of the CspA-family [Yersinia pestis biovar
Orientalis str. India 195]
gi|229693458|gb|EEO83507.1| stress protein, member of the CspA-family [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703594|gb|EEO90610.1| stress protein, member of the CspA-family [Yersinia pestis
Pestoides A]
gi|270044146|gb|EFA17238.1| Cold shock-like protein CspC [Serratia odorifera 4Rx13]
gi|270335210|gb|EFA45987.1| transcriptional repressor activity CueR [Yersinia pestis KIM D27]
gi|291421637|gb|EFE94884.1| MerR family copper efflux regulator [Serratia odorifera DSM 4582]
gi|320015521|gb|ADV99092.1| stress protein, member of the CspA-family [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|321168801|gb|ADW74500.1| cold-shock DNA-binding domain protein [Rahnella sp. Y9602]
gi|325666255|gb|ADZ42899.1| cold shock-like protein CspC [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860843|emb|CBX71127.1| cold shock-like protein cspC [Yersinia enterocolitica W22703]
gi|333474327|gb|AEF46037.1| cold-shock DNA-binding domain protein [Serratia plymuthica AS9]
gi|333491826|gb|AEF50988.1| cold-shock DNA-binding domain protein [Serratia sp. AS12]
gi|333961922|gb|AEG28695.1| cold-shock DNA-binding domain protein [Serratia sp. AS13]
gi|342855493|gb|AEL74046.1| cold shock-like protein CspC [Yersinia pestis A1122]
gi|351778165|gb|EHB20335.1| cold shock-like protein CspC [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|353675625|gb|EHD21658.1| cold-shock DNA-binding domain protein [Brenneria sp. EniD312]
gi|371589025|gb|AEX52755.1| cold shock protein [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|380754753|gb|AFE59144.1| cold shock-like protein CspC [Rahnella aquatilis HX2]
gi|383297090|gb|EIC85401.1| cold shock-like protein CspC [Serratia sp. M24T3]
gi|386377576|gb|EIJ18391.1| cold shock-like protein CspC [Serratia plymuthica PRI-2C]
gi|391427611|gb|EIQ89681.1| cold shock-like protein CspC [Yersinia pestis PY-01]
gi|391429060|gb|EIQ90952.1| cold shock-like protein CspC [Yersinia pestis PY-02]
gi|391430363|gb|EIQ92090.1| cold shock-like protein CspC [Yersinia pestis PY-03]
gi|391443127|gb|EIR03474.1| cold shock-like protein CspC [Yersinia pestis PY-04]
gi|391444442|gb|EIR04664.1| cold shock-like protein CspC [Yersinia pestis PY-05]
gi|391447443|gb|EIR07355.1| cold shock-like protein CspC [Yersinia pestis PY-06]
gi|391459907|gb|EIR18650.1| cold shock-like protein CspC [Yersinia pestis PY-07]
gi|391461077|gb|EIR19717.1| cold shock-like protein CspC [Yersinia pestis PY-08]
gi|391462902|gb|EIR21357.1| cold shock-like protein CspC [Yersinia pestis PY-09]
gi|391476044|gb|EIR33196.1| cold shock-like protein CspC [Yersinia pestis PY-10]
gi|391477637|gb|EIR34636.1| cold shock-like protein CspC [Yersinia pestis PY-11]
gi|391478042|gb|EIR35006.1| cold shock-like protein CspC [Yersinia pestis PY-12]
gi|391492073|gb|EIR47575.1| cold shock-like protein CspC [Yersinia pestis PY-13]
gi|391492969|gb|EIR48362.1| cold shock-like protein CspC [Yersinia pestis PY-15]
gi|391494986|gb|EIR50145.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|391507751|gb|EIR61551.1| cold shock-like protein CspC [Yersinia pestis PY-16]
gi|391508082|gb|EIR61860.1| cold shock-like protein CspC [Yersinia pestis PY-19]
gi|391512740|gb|EIR66033.1| cold shock-like protein CspC [Yersinia pestis PY-25]
gi|391523232|gb|EIR75559.1| cold shock-like protein CspC [Yersinia pestis PY-29]
gi|391525903|gb|EIR78001.1| cold shock-like protein CspC [Yersinia pestis PY-34]
gi|391526878|gb|EIR78863.1| cold shock-like protein CspC [Yersinia pestis PY-32]
gi|391538987|gb|EIR89742.1| cold shock-like protein CspC [Yersinia pestis PY-36]
gi|391541512|gb|EIR92045.1| cold shock-like protein CspC [Yersinia pestis PY-42]
gi|391543010|gb|EIR93387.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|391556809|gb|EIS05865.1| cold shock-like protein CspC [Yersinia pestis PY-46]
gi|391557169|gb|EIS06190.1| cold shock-like protein CspC [Yersinia pestis PY-47]
gi|391558332|gb|EIS07223.1| cold shock-like protein CspC [Yersinia pestis PY-48]
gi|391572004|gb|EIS19289.1| cold shock-like protein CspC [Yersinia pestis PY-52]
gi|391572552|gb|EIS19768.1| cold shock-like protein CspC [Yersinia pestis PY-53]
gi|391581504|gb|EIS27380.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|391584630|gb|EIS30135.1| cold shock-like protein CspC [Yersinia pestis PY-55]
gi|391587812|gb|EIS32936.1| cold shock-like protein CspC [Yersinia pestis PY-56]
gi|391600598|gb|EIS44114.1| cold shock-like protein CspC [Yersinia pestis PY-58]
gi|391601252|gb|EIS44691.1| cold shock-like protein CspC [Yersinia pestis PY-60]
gi|391602849|gb|EIS46097.1| cold shock-like protein CspC [Yersinia pestis PY-59]
gi|391615709|gb|EIS57445.1| cold shock-like protein CspC [Yersinia pestis PY-61]
gi|391616522|gb|EIS58172.1| cold shock-like protein CspC [Yersinia pestis PY-63]
gi|391622075|gb|EIS63043.1| cold shock-like protein CspC [Yersinia pestis PY-64]
gi|391627714|gb|EIS67891.1| cold shock-like protein CspC [Yersinia pestis PY-65]
gi|391638508|gb|EIS77305.1| cold shock-like protein CspC [Yersinia pestis PY-66]
gi|391638851|gb|EIS77607.1| cold shock-like protein CspC [Yersinia pestis PY-71]
gi|391641200|gb|EIS79650.1| cold shock-like protein CspC [Yersinia pestis PY-72]
gi|391650963|gb|EIS88195.1| cold shock-like protein CspC [Yersinia pestis PY-76]
gi|391656011|gb|EIS92688.1| cold shock-like protein CspC [Yersinia pestis PY-88]
gi|391660459|gb|EIS96615.1| cold shock-like protein CspC [Yersinia pestis PY-89]
gi|391664238|gb|EIS99990.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|391671184|gb|EIT06155.1| cold shock-like protein CspC [Yersinia pestis PY-91]
gi|391681842|gb|EIT15768.1| cold shock-like protein CspC [Yersinia pestis PY-93]
gi|391683358|gb|EIT17142.1| cold shock-like protein CspC [Yersinia pestis PY-92]
gi|391684067|gb|EIT17788.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|391695637|gb|EIT28191.1| cold shock-like protein CspC [Yersinia pestis PY-95]
gi|391699063|gb|EIT31291.1| cold shock-like protein CspC [Yersinia pestis PY-96]
gi|391700423|gb|EIT32520.1| cold shock-like protein CspC [Yersinia pestis PY-98]
gi|391709691|gb|EIT40843.1| cold shock-like protein CspC [Yersinia pestis PY-99]
gi|391716424|gb|EIT46876.1| cold shock-like protein CspC [Yersinia pestis PY-100]
gi|391717249|gb|EIT47634.1| cold shock-like protein CspC [Yersinia pestis PY-101]
gi|391728135|gb|EIT57277.1| cold shock-like protein CspC [Yersinia pestis PY-102]
gi|391730686|gb|EIT59484.1| cold shock-like protein CspC [Yersinia pestis PY-103]
gi|391735439|gb|EIT63580.1| cold shock-like protein CspC [Yersinia pestis PY-113]
gi|404513701|gb|EKA27511.1| cold shock-like protein CspC [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|407753871|gb|EKF64011.1| cold shock-like protein cspC [Serratia plymuthica A30]
gi|411176122|gb|EKS46142.1| cold shock-like protein CspC [Yersinia pestis INS]
gi|440052987|gb|AGB82890.1| cold shock protein [Serratia marcescens FGI94]
gi|445212964|gb|AGE18634.1| stress protein, member of the CspA-family [Serratia marcescens WW4]
gi|453066938|gb|EMF07856.1| cold shock-like protein CspC [Serratia marcescens VGH107]
Length = 69
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPSAVNVT 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|388257621|ref|ZP_10134800.1| hypothetical protein O59_002018 [Cellvibrio sp. BR]
gi|387938788|gb|EIK45340.1| hypothetical protein O59_002018 [Cellvibrio sp. BR]
Length = 67
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI ED+FVH + I+ Y++LAEG++VEF + QGDKG
Sbjct: 2 GTVKWFNNVRGYGFITRGEGGEDIFVHYRNIRAEG----YRSLAEGQSVEFQLQQGDKGL 57
Query: 96 EAINV 100
+A +V
Sbjct: 58 QAEDV 62
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI ED+FVH + I+ Y++LAEG++VEF + QGDKG
Sbjct: 2 GTVKWFNNVRGYGFITRGEGGEDIFVHYRNIRAEG----YRSLAEGQSVEFQLQQGDKGL 57
Query: 263 QFCFVLKNIVLYFS 276
Q +++VL S
Sbjct: 58 Q----AEDVVLLLS 67
>gi|15802236|ref|NP_288259.1| cold shock-like protein CspC [Escherichia coli O157:H7 str. EDL933]
gi|15831787|ref|NP_310560.1| cold shock-like protein CspC [Escherichia coli O157:H7 str. Sakai]
gi|16129777|ref|NP_416337.1| stress protein, member of the CspA-family [Escherichia coli str.
K-12 substr. MG1655]
gi|16760726|ref|NP_456343.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16765178|ref|NP_460793.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|26248085|ref|NP_754125.1| cold shock-like protein CspC [Escherichia coli CFT073]
gi|29141516|ref|NP_804858.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|30062921|ref|NP_837092.1| cold shock-like protein CspC [Shigella flexneri 2a str. 2457T]
gi|56413244|ref|YP_150319.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62180401|ref|YP_216818.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|74311864|ref|YP_310283.1| cold shock-like protein CspC [Shigella sonnei Ss046]
gi|82777211|ref|YP_403560.1| cold shock-like protein CspC [Shigella dysenteriae Sd197]
gi|91211042|ref|YP_541028.1| cold shock-like protein CspC [Escherichia coli UTI89]
gi|110641940|ref|YP_669670.1| cold shock-like protein CspC [Escherichia coli 536]
gi|110805383|ref|YP_688903.1| cold shock-like protein CspC [Shigella flexneri 5 str. 8401]
gi|146312039|ref|YP_001177113.1| cold shock-like protein CspC [Enterobacter sp. 638]
gi|152970887|ref|YP_001335996.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|157145410|ref|YP_001452730.1| cold shock-like protein CspC [Citrobacter koseri ATCC BAA-895]
gi|157157347|ref|YP_001463124.1| cold shock-like protein CspC [Escherichia coli E24377A]
gi|157161289|ref|YP_001458607.1| cold shock-like protein CspC [Escherichia coli HS]
gi|161503039|ref|YP_001570151.1| cold shock-like protein CspC [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|161613652|ref|YP_001587617.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167553480|ref|ZP_02347229.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167993785|ref|ZP_02574878.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168234267|ref|ZP_02659325.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168241432|ref|ZP_02666364.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259923|ref|ZP_02681896.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168462668|ref|ZP_02696599.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168820589|ref|ZP_02832589.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|170081478|ref|YP_001730798.1| cold shock-like protein CspC [Escherichia coli str. K-12 substr.
DH10B]
gi|170682897|ref|YP_001743423.1| cold shock-like protein CspC [Escherichia coli SMS-3-5]
gi|170769370|ref|ZP_02903823.1| cold shock protein CspC [Escherichia albertii TW07627]
gi|170770188|ref|ZP_02904641.1| cold shock protein CspC [Escherichia albertii TW07627]
gi|187733001|ref|YP_001880620.1| cold shock-like protein CspC [Shigella boydii CDC 3083-94]
gi|188492990|ref|ZP_03000260.1| cold shock DNA-binding protein [Escherichia coli 53638]
gi|188533664|ref|YP_001907461.1| cold shock-like protein CspC [Erwinia tasmaniensis Et1/99]
gi|189403500|ref|ZP_02795809.2| cold shock protein CspC [Escherichia coli O157:H7 str. EC4486]
gi|189404552|ref|ZP_02790213.2| cold shock protein CspC [Escherichia coli O157:H7 str. EC4501]
gi|189405077|ref|ZP_02813248.2| cold shock protein CspC [Escherichia coli O157:H7 str. EC869]
gi|191171767|ref|ZP_03033314.1| cold shock protein CspC [Escherichia coli F11]
gi|194430509|ref|ZP_03062983.1| cold shock protein CspC [Escherichia coli B171]
gi|194434939|ref|ZP_03067183.1| cold shock protein CspC [Shigella dysenteriae 1012]
gi|194446619|ref|YP_002041093.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194447468|ref|YP_002045883.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194471139|ref|ZP_03077123.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735301|ref|YP_002114871.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195940304|ref|ZP_03085686.1| cold shock-like protein CspC [Escherichia coli O157:H7 str. EC4024]
gi|197247963|ref|YP_002146187.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197265795|ref|ZP_03165869.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197362170|ref|YP_002141807.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198245948|ref|YP_002215303.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200391118|ref|ZP_03217729.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205352499|ref|YP_002226300.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206580814|ref|YP_002237792.1| cold-shock protein [Klebsiella pneumoniae 342]
gi|207856657|ref|YP_002243308.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|208810722|ref|ZP_03252598.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC4206]
gi|208816517|ref|ZP_03257637.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC4045]
gi|208819312|ref|ZP_03259632.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC4042]
gi|209397128|ref|YP_002270903.1| cold shock-like protein CspC [Escherichia coli O157:H7 str. EC4115]
gi|209919188|ref|YP_002293272.1| cold shock-like protein CspC [Escherichia coli SE11]
gi|213028972|ref|ZP_03343419.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213162944|ref|ZP_03348654.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213420305|ref|ZP_03353371.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213424204|ref|ZP_03357069.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213581262|ref|ZP_03363088.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213620853|ref|ZP_03373636.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213649656|ref|ZP_03379709.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213855888|ref|ZP_03384128.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|215487035|ref|YP_002329466.1| cold shock-like protein CspC [Escherichia coli O127:H6 str.
E2348/69]
gi|217328839|ref|ZP_03444920.1| cold shock protein CspC [Escherichia coli O157:H7 str. TW14588]
gi|218548618|ref|YP_002382409.1| cold shock-like protein CspC [Escherichia fergusonii ATCC 35469]
gi|218554396|ref|YP_002387309.1| cold shock-like protein CspC [Escherichia coli IAI1]
gi|218558685|ref|YP_002391598.1| cold shock-like protein CspC [Escherichia coli S88]
gi|218689759|ref|YP_002397971.1| cold shock-like protein CspC [Escherichia coli ED1a]
gi|218695386|ref|YP_002403053.1| cold shock-like protein CspC [Escherichia coli 55989]
gi|218699608|ref|YP_002407237.1| cold shock-like protein CspC [Escherichia coli IAI39]
gi|218705322|ref|YP_002412841.1| cold shock-like protein CspC [Escherichia coli UMN026]
gi|222156565|ref|YP_002556704.1| Cold shock-like protein cspC [Escherichia coli LF82]
gi|224583673|ref|YP_002637471.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|227885751|ref|ZP_04003556.1| cold shock family protein CspC [Escherichia coli 83972]
gi|237705773|ref|ZP_04536254.1| cold shock protein [Escherichia sp. 3_2_53FAA]
gi|237731860|ref|ZP_04562341.1| cold shock-like protein cspC [Citrobacter sp. 30_2]
gi|238895399|ref|YP_002920134.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238901037|ref|YP_002926833.1| cold shock-like protein CspC [Escherichia coli BW2952]
gi|238912099|ref|ZP_04655936.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|251785270|ref|YP_002999574.1| stress protein, member of the CspA family; predicted DNA-binding
transcriptional regulator [Escherichia coli BL21(DE3)]
gi|253773223|ref|YP_003036054.1| cold shock-like protein CspC [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161882|ref|YP_003044990.1| cold shock-like protein CspC [Escherichia coli B str. REL606]
gi|254288670|ref|YP_003054418.1| stress protein, member of the CspA-family [Escherichia coli
BL21(DE3)]
gi|254793446|ref|YP_003078283.1| cold shock-like protein CspC [Escherichia coli O157:H7 str.
TW14359]
gi|259908254|ref|YP_002648610.1| cold shock-like protein CspC [Erwinia pyrifoliae Ep1/96]
gi|260844168|ref|YP_003221946.1| stress protein CspC [Escherichia coli O103:H2 str. 12009]
gi|260855683|ref|YP_003229574.1| cold shock CspC [Escherichia coli O26:H11 str. 11368]
gi|260868343|ref|YP_003234745.1| stress protein CspC [Escherichia coli O111:H- str. 11128]
gi|261227680|ref|ZP_05941961.1| stress protein, member of the CspA-family [Escherichia coli O157:H7
str. FRIK2000]
gi|261258154|ref|ZP_05950687.1| Cold shock-like protein cspC [Escherichia coli O157:H7 str.
FRIK966]
gi|261340207|ref|ZP_05968065.1| conserved domain protein [Enterobacter cancerogenus ATCC 35316]
gi|262041935|ref|ZP_06015118.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|283832781|ref|ZP_06352522.1| conserved domain protein [Citrobacter youngae ATCC 29220]
gi|288934716|ref|YP_003438775.1| cold-shock DNA-binding domain-containing protein [Klebsiella
variicola At-22]
gi|289804519|ref|ZP_06535148.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|289825969|ref|ZP_06545128.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|290508848|ref|ZP_06548219.1| cold shock protein CspG [Klebsiella sp. 1_1_55]
gi|291283004|ref|YP_003499822.1| hypothetical protein G2583_2272 [Escherichia coli O55:H7 str.
CB9615]
gi|292488490|ref|YP_003531374.1| cold shock-like protein CspC [Erwinia amylovora CFBP1430]
gi|292899677|ref|YP_003539046.1| cold shock-like protein [Erwinia amylovora ATCC 49946]
gi|293405319|ref|ZP_06649311.1| cold shock protein CspG [Escherichia coli FVEC1412]
gi|293410131|ref|ZP_06653707.1| cold shock protein cspC [Escherichia coli B354]
gi|293415138|ref|ZP_06657781.1| cold shock protein CspG [Escherichia coli B185]
gi|293446195|ref|ZP_06662617.1| cold shock protein CspG [Escherichia coli B088]
gi|296101843|ref|YP_003611989.1| cold-shock protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|298380961|ref|ZP_06990560.1| cold shock-like protein cspC [Escherichia coli FVEC1302]
gi|300717038|ref|YP_003741841.1| cold shock protein [Erwinia billingiae Eb661]
gi|300816289|ref|ZP_07096511.1| cold shock protein CspE [Escherichia coli MS 107-1]
gi|300825532|ref|ZP_07105593.1| cold shock protein CspE [Escherichia coli MS 119-7]
gi|300899064|ref|ZP_07117350.1| cold shock protein CspE [Escherichia coli MS 198-1]
gi|300904686|ref|ZP_07122520.1| cold shock protein CspE [Escherichia coli MS 84-1]
gi|300917606|ref|ZP_07134258.1| cold shock protein CspE [Escherichia coli MS 115-1]
gi|300924891|ref|ZP_07140823.1| cold shock protein CspE [Escherichia coli MS 182-1]
gi|300928850|ref|ZP_07144356.1| cold shock protein CspE [Escherichia coli MS 187-1]
gi|300938827|ref|ZP_07153537.1| cold shock protein CspE [Escherichia coli MS 21-1]
gi|300951435|ref|ZP_07165274.1| cold shock protein CspE [Escherichia coli MS 116-1]
gi|300956672|ref|ZP_07168948.1| cold shock protein CspE [Escherichia coli MS 175-1]
gi|300981990|ref|ZP_07175834.1| cold shock protein CspE [Escherichia coli MS 200-1]
gi|300994227|ref|ZP_07180784.1| cold shock protein CspE [Escherichia coli MS 45-1]
gi|301020113|ref|ZP_07184242.1| cold shock protein CspE [Escherichia coli MS 196-1]
gi|301026567|ref|ZP_07189993.1| cold shock protein CspE [Escherichia coli MS 69-1]
gi|301050830|ref|ZP_07197684.1| cold shock protein CspE [Escherichia coli MS 185-1]
gi|301305922|ref|ZP_07212005.1| cold shock protein CspE [Escherichia coli MS 124-1]
gi|301327584|ref|ZP_07220801.1| cold shock protein CspE [Escherichia coli MS 78-1]
gi|301645665|ref|ZP_07245593.1| cold shock protein CspE [Escherichia coli MS 146-1]
gi|306814930|ref|ZP_07449086.1| Cold shock-like protein cspC [Escherichia coli NC101]
gi|307314098|ref|ZP_07593710.1| cold-shock DNA-binding domain protein [Escherichia coli W]
gi|309788269|ref|ZP_07682873.1| cold shock-like protein cspI [Shigella dysenteriae 1617]
gi|309794201|ref|ZP_07688625.1| cold shock protein CspE [Escherichia coli MS 145-7]
gi|311279278|ref|YP_003941509.1| cold-shock DNA-binding domain-containing protein [Enterobacter
cloacae SCF1]
gi|312967022|ref|ZP_07781240.1| cold shock-like protein cspI [Escherichia coli 2362-75]
gi|312969860|ref|ZP_07784043.1| cold shock-like protein cspI [Escherichia coli 1827-70]
gi|317048459|ref|YP_004116107.1| cold-shock DNA-binding domain-containing protein [Pantoea sp.
At-9b]
gi|330002884|ref|ZP_08304436.1| cold shock-like protein CspE [Klebsiella sp. MS 92-3]
gi|331642433|ref|ZP_08343568.1| conserved domain protein [Escherichia coli H736]
gi|331647319|ref|ZP_08348413.1| conserved domain protein [Escherichia coli M605]
gi|331653228|ref|ZP_08354233.1| conserved domain protein [Escherichia coli M718]
gi|331657867|ref|ZP_08358829.1| conserved domain protein [Escherichia coli TA206]
gi|331663313|ref|ZP_08364223.1| conserved domain protein [Escherichia coli TA143]
gi|331668514|ref|ZP_08369362.1| conserved domain protein [Escherichia coli TA271]
gi|331673355|ref|ZP_08374123.1| conserved domain protein [Escherichia coli TA280]
gi|331677700|ref|ZP_08378375.1| conserved domain protein [Escherichia coli H591]
gi|331683325|ref|ZP_08383926.1| conserved domain protein [Escherichia coli H299]
gi|332279025|ref|ZP_08391438.1| cold shock protein [Shigella sp. D9]
gi|334124501|ref|ZP_08498506.1| CspA family transcriptional regulator [Enterobacter hormaechei ATCC
49162]
gi|336250996|ref|YP_004594706.1| cold-shock protein [Enterobacter aerogenes KCTC 2190]
gi|339999664|ref|YP_004730547.1| cold shock-like protein CspC [Salmonella bongori NCTC 12419]
gi|345299688|ref|YP_004829046.1| cold-shock DNA-binding domain-containing protein [Enterobacter
asburiae LF7a]
gi|354724154|ref|ZP_09038369.1| Cold shock-like protein cspC [Enterobacter mori LMG 25706]
gi|365107538|ref|ZP_09335865.1| cold shock-like protein CspC [Citrobacter freundii 4_7_47CFAA]
gi|365137643|ref|ZP_09344357.1| cold shock-like protein CspC [Klebsiella sp. 4_1_44FAA]
gi|365849190|ref|ZP_09389661.1| cold shock-like protein CspE [Yokenella regensburgei ATCC 43003]
gi|366157832|ref|ZP_09457694.1| Cold shock-like protein cspC [Escherichia sp. TW09308]
gi|374980850|ref|ZP_09722180.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375001022|ref|ZP_09725362.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375114730|ref|ZP_09759900.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|375123307|ref|ZP_09768471.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|375261523|ref|YP_005020693.1| cold-shock protein [Klebsiella oxytoca KCTC 1686]
gi|377576158|ref|ZP_09805142.1| cold shock-like protein CspC [Escherichia hermannii NBRC 105704]
gi|378445243|ref|YP_005232875.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378450420|ref|YP_005237779.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378579887|ref|ZP_09828548.1| stress protein, member of the CspA-family [Pantoea stewartii subsp.
stewartii DC283]
gi|378699713|ref|YP_005181670.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378712737|ref|YP_005277630.1| cold-shock protein [Escherichia coli KO11FL]
gi|378766986|ref|YP_005195451.1| cold shock-like protein CspC [Pantoea ananatis LMG 5342]
gi|378955343|ref|YP_005212830.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378959198|ref|YP_005216684.1| cold-shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|378979513|ref|YP_005227654.1| cold-shock protein [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|378984398|ref|YP_005247553.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378989177|ref|YP_005252341.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379701013|ref|YP_005242741.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383178001|ref|YP_005456006.1| cold-shock protein [Shigella sonnei 53G]
gi|383496525|ref|YP_005397214.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|384543037|ref|YP_005727099.1| cold-shock protein [Shigella flexneri 2002017]
gi|385788557|ref|YP_005819666.1| cold-shock protein [Erwinia sp. Ejp617]
gi|386035476|ref|YP_005955389.1| cold-shock protein [Klebsiella pneumoniae KCTC 2242]
gi|386079155|ref|YP_005992680.1| cold-shock protein [Pantoea ananatis PA13]
gi|386280884|ref|ZP_10058548.1| cold shock-like protein CspC [Escherichia sp. 4_1_40B]
gi|386591666|ref|YP_006088066.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|386595367|ref|YP_006091767.1| cold-shock protein [Escherichia coli DH1]
gi|386599619|ref|YP_006101125.1| cold shock protein CspC [Escherichia coli IHE3034]
gi|386604214|ref|YP_006110514.1| cold-shock protein [Escherichia coli UM146]
gi|386609209|ref|YP_006124695.1| stress protein, member of the CspA-family [Escherichia coli W]
gi|386614379|ref|YP_006134045.1| cold shock-like protein CspI [Escherichia coli UMNK88]
gi|386619390|ref|YP_006138970.1| Cold shock protein [Escherichia coli NA114]
gi|386624449|ref|YP_006144177.1| stress protein, member of the CspA-family [Escherichia coli O7:K1
str. CE10]
gi|386629521|ref|YP_006149241.1| cold shock-like protein CspC [Escherichia coli str. 'clone D i2']
gi|386634441|ref|YP_006154160.1| cold shock-like protein CspC [Escherichia coli str. 'clone D i14']
gi|386639349|ref|YP_006106147.1| cold shock-like protein CspC [Escherichia coli ABU 83972]
gi|386701208|ref|YP_006165045.1| cold shock-like protein cspc [Escherichia coli KO11FL]
gi|386709682|ref|YP_006173403.1| cold shock-like protein cspc [Escherichia coli W]
gi|387507069|ref|YP_006159325.1| cold-shock protein [Escherichia coli O55:H7 str. RM12579]
gi|387607442|ref|YP_006096298.1| cold shock-like protein CspC [Escherichia coli 042]
gi|387617158|ref|YP_006120180.1| cold shock-like protein CspC [Escherichia coli O83:H1 str. NRG
857C]
gi|387621542|ref|YP_006129169.1| cold shock-like protein cspC [Escherichia coli DH1]
gi|387829732|ref|YP_003349669.1| cold shock protein [Escherichia coli SE15]
gi|387871099|ref|YP_005802472.1| cold shock-like protein cspC (CSP-C) [Erwinia pyrifoliae DSM 12163]
gi|387882930|ref|YP_006313232.1| cold shock-like protein CspC [Escherichia coli Xuzhou21]
gi|387889058|ref|YP_006319356.1| cold shock protein [Escherichia blattae DSM 4481]
gi|388477896|ref|YP_490084.1| stress protein, member of the CspA-family [Escherichia coli str.
K-12 substr. W3110]
gi|392979590|ref|YP_006478178.1| cold-shock protein [Enterobacter cloacae subsp. dissolvens SDM]
gi|395229782|ref|ZP_10408093.1| cold shock-like protein CspC [Citrobacter sp. A1]
gi|395232355|ref|ZP_10410606.1| Cold shock-like protein cspC [Enterobacter sp. Ag1]
gi|397165214|ref|ZP_10488667.1| cold shock-like protein CspC [Enterobacter radicincitans DSM 16656]
gi|397658628|ref|YP_006499330.1| Cold shock protein CspC [Klebsiella oxytoca E718]
gi|401675935|ref|ZP_10807922.1| CspC Protein [Enterobacter sp. SST3]
gi|401764165|ref|YP_006579172.1| cold-shock protein [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|402780150|ref|YP_006635696.1| cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402840524|ref|ZP_10888988.1| cold shock-like protein CspI [Klebsiella sp. OBRC7]
gi|404375184|ref|ZP_10980372.1| cold shock-like protein CspC [Escherichia sp. 1_1_43]
gi|407469623|ref|YP_006783934.1| cold-shock protein [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407481713|ref|YP_006778862.1| cold-shock protein [Escherichia coli O104:H4 str. 2011C-3493]
gi|409249828|ref|YP_006885643.1| Cold shock-like protein cspE CSP-E [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|410482262|ref|YP_006769808.1| cold-shock protein [Escherichia coli O104:H4 str. 2009EL-2050]
gi|414575624|ref|ZP_11432824.1| cold shock-like protein CspC [Shigella sonnei 3233-85]
gi|414595721|ref|ZP_11445335.1| cold shock-like protein CspC [Escherichia blattae NBRC 105725]
gi|415791606|ref|ZP_11495378.1| cold shock-like protein cspI [Escherichia coli EPECa14]
gi|415809130|ref|ZP_11501931.1| cold shock-like protein cspI [Escherichia coli LT-68]
gi|415817979|ref|ZP_11507895.1| cold shock-like protein cspI [Escherichia coli OK1180]
gi|415825924|ref|ZP_11513280.1| cold shock-like protein cspI [Escherichia coli OK1357]
gi|415842414|ref|ZP_11523088.1| cold shock-like protein cspI [Escherichia coli RN587/1]
gi|415856310|ref|ZP_11531296.1| cold shock-like protein cspI [Shigella flexneri 2a str. 2457T]
gi|415861263|ref|ZP_11534929.1| cold shock protein CspE [Escherichia coli MS 85-1]
gi|415873613|ref|ZP_11540833.1| hypothetical protein HMPREF9439_00538 [Escherichia coli MS 79-10]
gi|416275489|ref|ZP_11643963.1| Cold shock protein CspC [Shigella dysenteriae CDC 74-1112]
gi|416281607|ref|ZP_11645915.1| Cold shock protein CspC [Shigella boydii ATCC 9905]
gi|416299278|ref|ZP_11652296.1| Cold shock protein CspC [Shigella flexneri CDC 796-83]
gi|416312334|ref|ZP_11657535.1| Cold shock protein CspC [Escherichia coli O157:H7 str. 1044]
gi|416323049|ref|ZP_11664658.1| Cold shock protein CspC [Escherichia coli O157:H7 str. EC1212]
gi|416327304|ref|ZP_11667311.1| Cold shock protein CspC [Escherichia coli O157:H7 str. 1125]
gi|416337572|ref|ZP_11673935.1| Cold shock protein CspC [Escherichia coli WV_060327]
gi|416346845|ref|ZP_11679936.1| Cold shock protein CspC [Escherichia coli EC4100B]
gi|416421594|ref|ZP_11689592.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416433669|ref|ZP_11697092.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416436490|ref|ZP_11698292.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416448950|ref|ZP_11706601.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416451118|ref|ZP_11708011.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416456440|ref|ZP_11711444.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416468948|ref|ZP_11718242.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416481659|ref|ZP_11723393.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416491763|ref|ZP_11727274.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416498103|ref|ZP_11730029.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416504743|ref|ZP_11733325.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416512089|ref|ZP_11737633.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416528071|ref|ZP_11743670.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416535213|ref|ZP_11747577.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416541692|ref|ZP_11751124.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416550321|ref|ZP_11755904.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416562541|ref|ZP_11762241.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416570790|ref|ZP_11766285.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416579239|ref|ZP_11771097.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416585109|ref|ZP_11774662.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416590003|ref|ZP_11777519.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416601168|ref|ZP_11784832.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416604421|ref|ZP_11786181.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416612096|ref|ZP_11791275.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416619436|ref|ZP_11795098.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416629413|ref|ZP_11800077.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416640128|ref|ZP_11804890.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416651652|ref|ZP_11811169.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416654838|ref|ZP_11812342.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416666361|ref|ZP_11817435.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416673467|ref|ZP_11820896.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416698512|ref|ZP_11828443.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416704950|ref|ZP_11830562.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416710936|ref|ZP_11834894.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416716803|ref|ZP_11839095.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416721939|ref|ZP_11842998.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416733520|ref|ZP_11850518.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416737327|ref|ZP_11852559.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416745150|ref|ZP_11857098.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416759962|ref|ZP_11864715.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416762238|ref|ZP_11866234.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416771606|ref|ZP_11872841.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|416773908|ref|ZP_11873902.1| cold shock-like protein cspc [Escherichia coli O157:H7 str. G5101]
gi|416785910|ref|ZP_11878806.1| cold shock-like protein cspc [Escherichia coli O157:H- str. 493-89]
gi|416796889|ref|ZP_11883723.1| cold shock-like protein cspc [Escherichia coli O157:H- str. H 2687]
gi|416808334|ref|ZP_11888379.1| cold shock-like protein cspc [Escherichia coli O55:H7 str. 3256-97]
gi|416827588|ref|ZP_11897604.1| cold shock-like protein cspc [Escherichia coli O55:H7 str. USDA
5905]
gi|416828968|ref|ZP_11898262.1| cold shock-like protein cspc [Escherichia coli O157:H7 str. LSU-61]
gi|416897742|ref|ZP_11927390.1| cold shock-like protein cspI [Escherichia coli STEC_7v]
gi|417084761|ref|ZP_11952400.1| cold shock-like protein cspc [Escherichia coli cloneA_i1]
gi|417115692|ref|ZP_11966828.1| cold shock-like protein CspE [Escherichia coli 1.2741]
gi|417121302|ref|ZP_11970730.1| cold shock-like protein CspE [Escherichia coli 97.0246]
gi|417134311|ref|ZP_11979096.1| cold shock-like protein CspE [Escherichia coli 5.0588]
gi|417138187|ref|ZP_11981920.1| cold shock-like protein CspE [Escherichia coli 97.0259]
gi|417149967|ref|ZP_11989885.1| cold shock-like protein CspE [Escherichia coli 1.2264]
gi|417154561|ref|ZP_11992690.1| cold shock-like protein CspE [Escherichia coli 96.0497]
gi|417168009|ref|ZP_12000631.1| cold shock-like protein CspE [Escherichia coli 99.0741]
gi|417172719|ref|ZP_12002752.1| cold shock-like protein CspE [Escherichia coli 3.2608]
gi|417187738|ref|ZP_12012404.1| cold shock-like protein CspE [Escherichia coli 93.0624]
gi|417195497|ref|ZP_12015911.1| cold shock-like protein CspE [Escherichia coli 4.0522]
gi|417213114|ref|ZP_12022476.1| cold shock-like protein CspE [Escherichia coli JB1-95]
gi|417220964|ref|ZP_12024404.1| cold shock-like protein CspE [Escherichia coli 96.154]
gi|417231287|ref|ZP_12032685.1| cold shock-like protein CspE [Escherichia coli 5.0959]
gi|417247687|ref|ZP_12040443.1| cold shock-like protein CspE [Escherichia coli 9.0111]
gi|417252097|ref|ZP_12043860.1| cold shock-like protein CspE [Escherichia coli 4.0967]
gi|417261653|ref|ZP_12049141.1| cold shock-like protein CspE [Escherichia coli 2.3916]
gi|417266147|ref|ZP_12053516.1| cold shock-like protein CspE [Escherichia coli 3.3884]
gi|417272713|ref|ZP_12060062.1| cold shock-like protein CspE [Escherichia coli 2.4168]
gi|417276761|ref|ZP_12064087.1| cold shock-like protein CspE [Escherichia coli 3.2303]
gi|417283886|ref|ZP_12071183.1| cold shock-like protein CspE [Escherichia coli 3003]
gi|417291458|ref|ZP_12078739.1| cold shock-like protein CspE [Escherichia coli B41]
gi|417298656|ref|ZP_12085894.1| cold shock-like protein CspE [Escherichia coli 900105 (10e)]
gi|417308287|ref|ZP_12095140.1| Cold shock-like protein CspC [Escherichia coli PCN033]
gi|417325889|ref|ZP_12111733.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417333264|ref|ZP_12116879.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|417341318|ref|ZP_12122413.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417348628|ref|ZP_12127532.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417357601|ref|ZP_12132702.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417365291|ref|ZP_12137981.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417372872|ref|ZP_12143058.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417378959|ref|ZP_12147460.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417390475|ref|ZP_12153958.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417415119|ref|ZP_12158867.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|417458027|ref|ZP_12163934.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417474656|ref|ZP_12169690.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417510266|ref|ZP_12175224.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|417517908|ref|ZP_12180387.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417530129|ref|ZP_12185541.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|417538808|ref|ZP_12191287.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|417581299|ref|ZP_12232104.1| cold shock-like protein cspI [Escherichia coli STEC_B2F1]
gi|417586699|ref|ZP_12237471.1| cold shock-like protein cspI [Escherichia coli STEC_C165-02]
gi|417596951|ref|ZP_12247599.1| cold shock-like protein cspI [Escherichia coli 3030-1]
gi|417602414|ref|ZP_12252984.1| cold shock-like protein cspI [Escherichia coli STEC_94C]
gi|417608390|ref|ZP_12258896.1| cold shock-like protein cspI [Escherichia coli STEC_DG131-3]
gi|417613243|ref|ZP_12263704.1| cold shock-like protein cspI [Escherichia coli STEC_EH250]
gi|417618381|ref|ZP_12268801.1| cold shock-like protein cspI [Escherichia coli G58-1]
gi|417623555|ref|ZP_12273860.1| cold shock-like protein cspI [Escherichia coli STEC_H.1.8]
gi|417628995|ref|ZP_12279235.1| cold shock-like protein cspI [Escherichia coli STEC_MHI813]
gi|417634738|ref|ZP_12284952.1| cold shock-like protein cspI [Escherichia coli STEC_S1191]
gi|417639358|ref|ZP_12289508.1| cold shock-like protein cspI [Escherichia coli TX1999]
gi|417662412|ref|ZP_12311993.1| cold shock protein CspC [Escherichia coli AA86]
gi|417667210|ref|ZP_12316758.1| cold shock-like protein cspI [Escherichia coli STEC_O31]
gi|417672308|ref|ZP_12321779.1| cold shock-like protein cspI [Shigella dysenteriae 155-74]
gi|417681619|ref|ZP_12330993.1| cold shock-like protein cspI [Shigella boydii 3594-74]
gi|417689806|ref|ZP_12339034.1| cold shock-like protein cspI [Shigella boydii 5216-82]
gi|417702046|ref|ZP_12351167.1| cold shock-like protein cspI [Shigella flexneri K-218]
gi|417707482|ref|ZP_12356527.1| cold shock-like protein cspI [Shigella flexneri VA-6]
gi|417712323|ref|ZP_12361312.1| cold shock-like protein cspI [Shigella flexneri K-272]
gi|417717007|ref|ZP_12365925.1| cold shock-like protein cspI [Shigella flexneri K-227]
gi|417722927|ref|ZP_12371745.1| cold shock-like protein cspI [Shigella flexneri K-304]
gi|417727336|ref|ZP_12376075.1| cold shock-like protein cspI [Shigella flexneri K-671]
gi|417732480|ref|ZP_12381149.1| cold shock-like protein cspI [Shigella flexneri 2747-71]
gi|417736703|ref|ZP_12385317.1| cold shock-like protein cspI [Shigella flexneri 4343-70]
gi|417743050|ref|ZP_12391591.1| cold shock protein [Shigella flexneri 2930-71]
gi|417755866|ref|ZP_12403950.1| cold shock-like protein CspC [Escherichia coli DEC2B]
gi|417805336|ref|ZP_12452292.1| Cold shock-like protein cspC [Escherichia coli O104:H4 str.
LB226692]
gi|417827718|ref|ZP_12474281.1| cold shock protein [Shigella flexneri J1713]
gi|417833060|ref|ZP_12479508.1| Cold shock-like protein cspC [Escherichia coli O104:H4 str.
01-09591]
gi|417865300|ref|ZP_12510344.1| cspC [Escherichia coli O104:H4 str. C227-11]
gi|417943496|ref|ZP_12586744.1| Cold shock-like protein cspC [Escherichia coli XH140A]
gi|417974918|ref|ZP_12615719.1| Cold shock-like protein cspC [Escherichia coli XH001]
gi|418255628|ref|ZP_12879909.1| cold shock protein CspC [Shigella flexneri 6603-63]
gi|418264606|ref|ZP_12884921.1| cold shock protein CspC [Shigella sonnei str. Moseley]
gi|418303091|ref|ZP_12914885.1| cold shock-like protein cspI (CPS-I) [Escherichia coli UMNF18]
gi|418484143|ref|ZP_13053147.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418486657|ref|ZP_13055607.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493675|ref|ZP_13060137.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418497662|ref|ZP_13064079.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418502394|ref|ZP_13068766.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418509447|ref|ZP_13075741.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418513389|ref|ZP_13079620.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|418527665|ref|ZP_13093621.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418762937|ref|ZP_13319062.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765805|ref|ZP_13321886.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418772514|ref|ZP_13328518.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418777442|ref|ZP_13333371.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418778965|ref|ZP_13334872.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418785912|ref|ZP_13341738.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418789140|ref|ZP_13344928.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418794641|ref|ZP_13350359.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418797026|ref|ZP_13352717.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418802227|ref|ZP_13357855.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418809372|ref|ZP_13364924.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418813527|ref|ZP_13369048.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418817839|ref|ZP_13373323.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418820749|ref|ZP_13376181.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418828576|ref|ZP_13383604.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418833534|ref|ZP_13388457.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418836750|ref|ZP_13391634.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418840475|ref|ZP_13395304.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418845075|ref|ZP_13399861.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418850511|ref|ZP_13405227.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418852369|ref|ZP_13407071.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418859968|ref|ZP_13414555.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418863404|ref|ZP_13417942.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418867020|ref|ZP_13421481.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|418941086|ref|ZP_13494425.1| Cold shock-like protein cspC [Escherichia coli O157:H43 str. T22]
gi|418957812|ref|ZP_13509735.1| Cold shock-like protein cspC [Escherichia coli J53]
gi|418996736|ref|ZP_13544336.1| cold shock protein CspC [Escherichia coli DEC1A]
gi|419002217|ref|ZP_13549754.1| cold shock protein CspC [Escherichia coli DEC1B]
gi|419007873|ref|ZP_13555313.1| cold shock protein CspC [Escherichia coli DEC1C]
gi|419013655|ref|ZP_13561010.1| cold shock-like protein CspC [Escherichia coli DEC1D]
gi|419018482|ref|ZP_13565793.1| cold shock protein CspC [Escherichia coli DEC1E]
gi|419024126|ref|ZP_13571357.1| cold shock-like protein CspC [Escherichia coli DEC2A]
gi|419029174|ref|ZP_13576346.1| cold shock protein CspC [Escherichia coli DEC2C]
gi|419034665|ref|ZP_13581756.1| cold shock protein CspC [Escherichia coli DEC2D]
gi|419039770|ref|ZP_13586811.1| cold shock protein CspC [Escherichia coli DEC2E]
gi|419045386|ref|ZP_13592332.1| cold shock protein CspC [Escherichia coli DEC3A]
gi|419051359|ref|ZP_13598240.1| cold shock protein CspC [Escherichia coli DEC3B]
gi|419057359|ref|ZP_13604174.1| cold shock protein CspC [Escherichia coli DEC3C]
gi|419062738|ref|ZP_13609477.1| cold shock protein CspC [Escherichia coli DEC3D]
gi|419069641|ref|ZP_13615277.1| cold shock protein CspC [Escherichia coli DEC3E]
gi|419075511|ref|ZP_13621043.1| cold shock protein CspC [Escherichia coli DEC3F]
gi|419080875|ref|ZP_13626332.1| cold shock protein CspC [Escherichia coli DEC4A]
gi|419086509|ref|ZP_13631879.1| cold shock protein CspC [Escherichia coli DEC4B]
gi|419092674|ref|ZP_13637967.1| cold shock protein CspC [Escherichia coli DEC4C]
gi|419098194|ref|ZP_13643407.1| cold shock protein CspC [Escherichia coli DEC4D]
gi|419104133|ref|ZP_13649274.1| cold shock protein CspC [Escherichia coli DEC4E]
gi|419109685|ref|ZP_13654752.1| cold shock protein CspC [Escherichia coli DEC4F]
gi|419114964|ref|ZP_13659986.1| cold shock protein CspC [Escherichia coli DEC5A]
gi|419120640|ref|ZP_13665606.1| cold shock protein CspC [Escherichia coli DEC5B]
gi|419131758|ref|ZP_13676599.1| cold shock protein CspC [Escherichia coli DEC5D]
gi|419136584|ref|ZP_13681385.1| cold shock-like protein CspC [Escherichia coli DEC5E]
gi|419142523|ref|ZP_13687270.1| cold shock-like protein CspC [Escherichia coli DEC6A]
gi|419148447|ref|ZP_13693120.1| cold shock protein CspC [Escherichia coli DEC6B]
gi|419154014|ref|ZP_13698582.1| cold shock-like protein CspC [Escherichia coli DEC6C]
gi|419159322|ref|ZP_13703831.1| cold shock-like protein CspC [Escherichia coli DEC6D]
gi|419164543|ref|ZP_13709000.1| cold shock protein CspC [Escherichia coli DEC6E]
gi|419170381|ref|ZP_13714271.1| cold shock-like protein CspC [Escherichia coli DEC7A]
gi|419175332|ref|ZP_13719177.1| cold shock protein CspC [Escherichia coli DEC7B]
gi|419181030|ref|ZP_13724647.1| cold shock protein CspC [Escherichia coli DEC7C]
gi|419186466|ref|ZP_13729983.1| cold shock protein CspC [Escherichia coli DEC7D]
gi|419191751|ref|ZP_13735211.1| cold shock-like protein CspC [Escherichia coli DEC7E]
gi|419197207|ref|ZP_13740600.1| cold shock-like protein CspC [Escherichia coli DEC8A]
gi|419203343|ref|ZP_13746542.1| cold shock protein CspC [Escherichia coli DEC8B]
gi|419209686|ref|ZP_13752776.1| cold shock protein CspC [Escherichia coli DEC8C]
gi|419215719|ref|ZP_13758726.1| cold shock protein CspC [Escherichia coli DEC8D]
gi|419221568|ref|ZP_13764499.1| cold shock protein CspC [Escherichia coli DEC8E]
gi|419226898|ref|ZP_13769763.1| cold shock protein CspC [Escherichia coli DEC9A]
gi|419232509|ref|ZP_13775290.1| cold shock protein CspC [Escherichia coli DEC9B]
gi|419238021|ref|ZP_13780746.1| cold shock protein CspC [Escherichia coli DEC9C]
gi|419243459|ref|ZP_13786100.1| cold shock protein CspC [Escherichia coli DEC9D]
gi|419249282|ref|ZP_13791871.1| cold shock protein CspC [Escherichia coli DEC9E]
gi|419255036|ref|ZP_13797559.1| cold shock protein CspC [Escherichia coli DEC10A]
gi|419261242|ref|ZP_13803670.1| cold shock protein CspC [Escherichia coli DEC10B]
gi|419267101|ref|ZP_13809462.1| cold shock protein CspC [Escherichia coli DEC10C]
gi|419272751|ref|ZP_13815053.1| cold shock protein CspC [Escherichia coli DEC10D]
gi|419278199|ref|ZP_13820453.1| cold shock protein CspC [Escherichia coli DEC10E]
gi|419284173|ref|ZP_13826357.1| cold shock protein CspC [Escherichia coli DEC10F]
gi|419289716|ref|ZP_13831811.1| cold shock protein CspC [Escherichia coli DEC11A]
gi|419295050|ref|ZP_13837096.1| cold shock protein CspC [Escherichia coli DEC11B]
gi|419300369|ref|ZP_13842370.1| cold shock-like protein CspC [Escherichia coli DEC11C]
gi|419306465|ref|ZP_13848369.1| cold shock-like protein CspC [Escherichia coli DEC11D]
gi|419311490|ref|ZP_13853357.1| cold shock-like protein CspC [Escherichia coli DEC11E]
gi|419316847|ref|ZP_13858659.1| cold shock-like protein CspC [Escherichia coli DEC12A]
gi|419322976|ref|ZP_13864682.1| cold shock protein CspC [Escherichia coli DEC12B]
gi|419328967|ref|ZP_13870582.1| cold shock-like protein CspC [Escherichia coli DEC12C]
gi|419334516|ref|ZP_13876060.1| cold shock protein CspC [Escherichia coli DEC12D]
gi|419340082|ref|ZP_13881557.1| cold shock protein CspC [Escherichia coli DEC12E]
gi|419345439|ref|ZP_13886817.1| cold shock protein CspC [Escherichia coli DEC13A]
gi|419349858|ref|ZP_13891202.1| cold shock protein CspC [Escherichia coli DEC13B]
gi|419355255|ref|ZP_13896517.1| cold shock protein CspC [Escherichia coli DEC13C]
gi|419360280|ref|ZP_13901501.1| cold shock protein CspC [Escherichia coli DEC13D]
gi|419365389|ref|ZP_13906555.1| cold shock protein CspC [Escherichia coli DEC13E]
gi|419370226|ref|ZP_13911347.1| cold shock-like protein CspC [Escherichia coli DEC14A]
gi|419375696|ref|ZP_13916725.1| cold shock protein CspC [Escherichia coli DEC14B]
gi|419381012|ref|ZP_13921968.1| cold shock protein CspC [Escherichia coli DEC14C]
gi|419386285|ref|ZP_13927166.1| cold shock protein CspC [Escherichia coli DEC14D]
gi|419391739|ref|ZP_13932554.1| cold shock protein CspC [Escherichia coli DEC15A]
gi|419396808|ref|ZP_13937578.1| cold shock protein CspC [Escherichia coli DEC15B]
gi|419402143|ref|ZP_13942868.1| cold shock protein CspC [Escherichia coli DEC15C]
gi|419407286|ref|ZP_13947977.1| cold shock protein CspC [Escherichia coli DEC15D]
gi|419412822|ref|ZP_13953478.1| cold shock protein CspC [Escherichia coli DEC15E]
gi|419700614|ref|ZP_14228220.1| Cold shock-like protein cspC [Escherichia coli SCI-07]
gi|419730507|ref|ZP_14257453.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419732193|ref|ZP_14259099.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739086|ref|ZP_14265840.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419743826|ref|ZP_14270489.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419750201|ref|ZP_14276667.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419788314|ref|ZP_14314005.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419793700|ref|ZP_14319318.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|419806911|ref|ZP_14331997.1| Cold shock-like protein cspC [Escherichia coli AI27]
gi|419808915|ref|ZP_14333801.1| Cold shock-like protein cspC [Escherichia coli O32:H37 str. P4]
gi|419865530|ref|ZP_14387912.1| Cold shock-like protein cspC [Escherichia coli O103:H25 str.
CVM9340]
gi|419869458|ref|ZP_14391662.1| Cold shock-like protein cspC [Escherichia coli O103:H2 str.
CVM9450]
gi|419878055|ref|ZP_14399534.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CVM9534]
gi|419884294|ref|ZP_14405270.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CVM9545]
gi|419887821|ref|ZP_14408373.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CVM9570]
gi|419897155|ref|ZP_14416748.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CVM9574]
gi|419903136|ref|ZP_14422251.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM9942]
gi|419909243|ref|ZP_14427855.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM10026]
gi|419914034|ref|ZP_14432441.1| Cold shock-like protein cspC [Escherichia coli KD1]
gi|419916453|ref|ZP_14434760.1| Cold shock-like protein cspC [Escherichia coli KD2]
gi|419923606|ref|ZP_14441543.1| Cold shock-like protein cspC [Escherichia coli 541-15]
gi|419930524|ref|ZP_14448123.1| Cold shock-like protein cspC [Escherichia coli 541-1]
gi|419932377|ref|ZP_14449693.1| Cold shock-like protein cspC [Escherichia coli 576-1]
gi|419941916|ref|ZP_14458568.1| Cold shock-like protein cspC [Escherichia coli 75]
gi|419946647|ref|ZP_14463039.1| Cold shock-like protein cspC [Escherichia coli HM605]
gi|419950106|ref|ZP_14466327.1| Cold shock-like protein cspC [Escherichia coli CUMT8]
gi|419958514|ref|ZP_14474578.1| Cold shock-like protein cspC [Enterobacter cloacae subsp. cloacae
GS1]
gi|419973879|ref|ZP_14489301.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419979271|ref|ZP_14494563.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419985175|ref|ZP_14500317.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419990501|ref|ZP_14505472.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419998868|ref|ZP_14513650.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420002737|ref|ZP_14517387.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420009299|ref|ZP_14523783.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420014835|ref|ZP_14529139.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420020028|ref|ZP_14534218.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420025687|ref|ZP_14539694.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420030408|ref|ZP_14544234.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420036430|ref|ZP_14550090.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420043034|ref|ZP_14556524.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420048969|ref|ZP_14562280.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420053828|ref|ZP_14567004.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420059362|ref|ZP_14572370.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420065925|ref|ZP_14578728.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420072836|ref|ZP_14585470.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420076492|ref|ZP_14588963.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420082058|ref|ZP_14594360.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|420091419|ref|ZP_14603166.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CVM9602]
gi|420093798|ref|ZP_14605433.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CVM9634]
gi|420104224|ref|ZP_14614960.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CVM9455]
gi|420109082|ref|ZP_14619270.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CVM9553]
gi|420117127|ref|ZP_14626494.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM10021]
gi|420121905|ref|ZP_14630948.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM10030]
gi|420129132|ref|ZP_14637672.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM10224]
gi|420134095|ref|ZP_14642242.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM9952]
gi|420269577|ref|ZP_14771950.1| cold shock-like protein cspC [Escherichia coli PA22]
gi|420275585|ref|ZP_14777886.1| cold shock-like protein cspC [Escherichia coli PA40]
gi|420280808|ref|ZP_14783055.1| cold shock-like protein cspC [Escherichia coli TW06591]
gi|420286779|ref|ZP_14788976.1| cold shock-like protein cspC [Escherichia coli TW10246]
gi|420292567|ref|ZP_14794699.1| cold shock-like protein cspC [Escherichia coli TW11039]
gi|420298353|ref|ZP_14800416.1| cold shock-like protein cspC [Escherichia coli TW09109]
gi|420304399|ref|ZP_14806406.1| cold shock-like protein cspC [Escherichia coli TW10119]
gi|420309960|ref|ZP_14811904.1| cold shock-like protein cspC [Escherichia coli EC1738]
gi|420315056|ref|ZP_14816939.1| cold shock-like protein cspC [Escherichia coli EC1734]
gi|420320082|ref|ZP_14821920.1| cold shock-like protein CspC [Shigella flexneri 2850-71]
gi|420325215|ref|ZP_14826983.1| cold shock-like protein CspC [Shigella flexneri CCH060]
gi|420330966|ref|ZP_14832642.1| cold shock-like protein CspC [Shigella flexneri K-1770]
gi|420335832|ref|ZP_14837432.1| cold shock-like protein CspC [Shigella flexneri K-315]
gi|420341484|ref|ZP_14842985.1| cold shock-like protein CspC [Shigella flexneri K-404]
gi|420347065|ref|ZP_14848471.1| cold shock-like protein CspC [Shigella boydii 965-58]
gi|420352858|ref|ZP_14853987.1| cold shock-like protein CspC [Shigella boydii 4444-74]
gi|420358148|ref|ZP_14859141.1| cold shock-like protein CspC [Shigella sonnei 3226-85]
gi|420363188|ref|ZP_14864090.1| cold shock protein CspC [Shigella sonnei 4822-66]
gi|420366530|ref|ZP_14867370.1| cold shock-like protein CspC [Shigella flexneri 1235-66]
gi|420372031|ref|ZP_14872370.1| cold shock-like protein CspC [Shigella flexneri 1235-66]
gi|420380435|ref|ZP_14879901.1| cold shock-like protein CspC [Shigella dysenteriae 225-75]
gi|420385816|ref|ZP_14885175.1| cold shock-like protein CspC [Escherichia coli EPECa12]
gi|420391503|ref|ZP_14890760.1| cold shock protein CspC [Escherichia coli EPEC C342-62]
gi|421358718|ref|ZP_15809015.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421362688|ref|ZP_15812940.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367888|ref|ZP_15818081.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370445|ref|ZP_15820610.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377933|ref|ZP_15828022.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421382541|ref|ZP_15832587.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421387731|ref|ZP_15837730.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421391834|ref|ZP_15841800.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421394962|ref|ZP_15844901.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421401226|ref|ZP_15851102.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421403172|ref|ZP_15853026.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421410539|ref|ZP_15860320.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421412804|ref|ZP_15862558.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421416797|ref|ZP_15866516.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421421792|ref|ZP_15871460.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425934|ref|ZP_15875568.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421431388|ref|ZP_15880973.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421436683|ref|ZP_15886210.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421441255|ref|ZP_15890725.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446807|ref|ZP_15896219.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421447917|ref|ZP_15897313.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421570564|ref|ZP_16016252.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421574777|ref|ZP_16020398.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421579615|ref|ZP_16025177.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421583015|ref|ZP_16028544.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421682221|ref|ZP_16122035.1| cold shock protein CspC [Shigella flexneri 1485-80]
gi|421725832|ref|ZP_16165015.1| Cold shock-like protein cspC [Klebsiella oxytoca M5al]
gi|421774182|ref|ZP_16210795.1| Cold shock-like protein cspC [Escherichia coli AD30]
gi|421812503|ref|ZP_16248250.1| cold shock-like protein cspC [Escherichia coli 8.0416]
gi|421818537|ref|ZP_16254049.1| cold shock-like protein CspC [Escherichia coli 10.0821]
gi|421824158|ref|ZP_16259552.1| cold shock-like protein cspC [Escherichia coli FRIK920]
gi|421831045|ref|ZP_16266343.1| cold shock-like protein cspC [Escherichia coli PA7]
gi|421847645|ref|ZP_16280780.1| Cold shock-like protein cspC [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|421885188|ref|ZP_16316389.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|421913486|ref|ZP_16343167.1| Cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421919013|ref|ZP_16348523.1| Cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|422031053|ref|ZP_16377234.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|422335256|ref|ZP_16416257.1| cold shock-like protein CspC [Escherichia coli 4_1_47FAA]
gi|422353968|ref|ZP_16434715.1| cold shock protein CspE [Escherichia coli MS 117-3]
gi|422359661|ref|ZP_16440298.1| cold shock protein CspE [Escherichia coli MS 110-3]
gi|422366932|ref|ZP_16447389.1| cold shock protein CspE [Escherichia coli MS 153-1]
gi|422368332|ref|ZP_16448744.1| cold shock protein CspE [Escherichia coli MS 16-3]
gi|422377113|ref|ZP_16457356.1| cold shock protein CspE [Escherichia coli MS 60-1]
gi|422381601|ref|ZP_16461765.1| cold shock protein CspE [Escherichia coli MS 57-2]
gi|422749048|ref|ZP_16802960.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H252]
gi|422755158|ref|ZP_16808983.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H263]
gi|422761069|ref|ZP_16814828.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1167]
gi|422766389|ref|ZP_16820116.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1520]
gi|422772302|ref|ZP_16825990.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E482]
gi|422774277|ref|ZP_16827933.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H120]
gi|422781276|ref|ZP_16834061.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
TW10509]
gi|422786412|ref|ZP_16839151.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H489]
gi|422790931|ref|ZP_16843635.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
TA007]
gi|422799108|ref|ZP_16847607.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
M863]
gi|422805834|ref|ZP_16854266.1| cold-shock DNA-binding domain-containing protein [Escherichia
fergusonii B253]
gi|422816896|ref|ZP_16865110.1| cold shock-like protein CspC [Escherichia coli M919]
gi|422828870|ref|ZP_16877039.1| cold shock-like protein cspC [Escherichia coli B093]
gi|422835783|ref|ZP_16883835.1| cold shock-like protein cspC [Escherichia coli E101]
gi|422838260|ref|ZP_16886233.1| cold shock-like protein cspC [Escherichia coli H397]
gi|422956815|ref|ZP_16969289.1| cold shock-like protein CspC [Escherichia coli H494]
gi|422973394|ref|ZP_16975778.1| cold shock-like protein CspC [Escherichia coli TA124]
gi|422987875|ref|ZP_16978651.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
C227-11]
gi|422994756|ref|ZP_16985520.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
C236-11]
gi|422999896|ref|ZP_16990650.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
09-7901]
gi|423003507|ref|ZP_16994253.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
04-8351]
gi|423010072|ref|ZP_17000810.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-3677]
gi|423019299|ref|ZP_17010008.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-4404]
gi|423024465|ref|ZP_17015162.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-4522]
gi|423030282|ref|ZP_17020970.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-4623]
gi|423038114|ref|ZP_17028788.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423043234|ref|ZP_17033901.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423044976|ref|ZP_17035637.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423053509|ref|ZP_17042317.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423060473|ref|ZP_17049269.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423103629|ref|ZP_17091331.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5242]
gi|423109021|ref|ZP_17096716.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5243]
gi|423114981|ref|ZP_17102672.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5245]
gi|423120907|ref|ZP_17108591.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5246]
gi|423124483|ref|ZP_17112162.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5250]
gi|423140337|ref|ZP_17127975.1| cold shock protein CspE [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|423704711|ref|ZP_17679134.1| cold shock-like protein CspC [Escherichia coli H730]
gi|423705808|ref|ZP_17680191.1| cold shock-like protein CspC [Escherichia coli B799]
gi|423711506|ref|ZP_17685815.1| cold shock-like protein cspC [Escherichia coli PA31]
gi|424077661|ref|ZP_17814715.1| cold shock-like protein cspC [Escherichia coli FDA505]
gi|424084037|ref|ZP_17820598.1| cold shock-like protein cspC [Escherichia coli FDA517]
gi|424090458|ref|ZP_17826486.1| cold shock-like protein cspC [Escherichia coli FRIK1996]
gi|424096983|ref|ZP_17832403.1| cold shock-like protein cspC [Escherichia coli FRIK1985]
gi|424103321|ref|ZP_17838197.1| cold shock-like protein cspC [Escherichia coli FRIK1990]
gi|424110044|ref|ZP_17844363.1| cold shock-like protein cspC [Escherichia coli 93-001]
gi|424115750|ref|ZP_17849681.1| cold shock-like protein cspC [Escherichia coli PA3]
gi|424122119|ref|ZP_17855532.1| cold shock-like protein cspC [Escherichia coli PA5]
gi|424128245|ref|ZP_17861221.1| cold shock-like protein cspC [Escherichia coli PA9]
gi|424134436|ref|ZP_17866982.1| cold shock-like protein cspC [Escherichia coli PA10]
gi|424141075|ref|ZP_17873053.1| cold shock-like protein cspC [Escherichia coli PA14]
gi|424147502|ref|ZP_17878963.1| cold shock-like protein cspC [Escherichia coli PA15]
gi|424153435|ref|ZP_17884450.1| cold shock-like protein cspC [Escherichia coli PA24]
gi|424235928|ref|ZP_17889901.1| cold shock-like protein cspC [Escherichia coli PA25]
gi|424313515|ref|ZP_17895808.1| cold shock-like protein cspC [Escherichia coli PA28]
gi|424449858|ref|ZP_17901632.1| cold shock-like protein cspC [Escherichia coli PA32]
gi|424456027|ref|ZP_17907255.1| cold shock-like protein cspC [Escherichia coli PA33]
gi|424462332|ref|ZP_17912904.1| cold shock-like protein cspC [Escherichia coli PA39]
gi|424468731|ref|ZP_17918645.1| cold shock-like protein cspC [Escherichia coli PA41]
gi|424475316|ref|ZP_17924725.1| cold shock-like protein cspC [Escherichia coli PA42]
gi|424481058|ref|ZP_17930100.1| cold shock-like protein cspC [Escherichia coli TW07945]
gi|424487237|ref|ZP_17935864.1| cold shock-like protein cspC [Escherichia coli TW09098]
gi|424493642|ref|ZP_17941550.1| cold shock-like protein cspC [Escherichia coli TW09195]
gi|424500501|ref|ZP_17947501.1| cold shock-like protein cspC [Escherichia coli EC4203]
gi|424506656|ref|ZP_17953169.1| cold shock-like protein cspC [Escherichia coli EC4196]
gi|424514142|ref|ZP_17958921.1| cold shock-like protein cspC [Escherichia coli TW14313]
gi|424520433|ref|ZP_17964627.1| cold shock-like protein cspC [Escherichia coli TW14301]
gi|424526342|ref|ZP_17970126.1| cold shock-like protein cspC [Escherichia coli EC4421]
gi|424532506|ref|ZP_17975911.1| cold shock-like protein cspC [Escherichia coli EC4422]
gi|424538509|ref|ZP_17981526.1| cold shock-like protein cspC [Escherichia coli EC4013]
gi|424544475|ref|ZP_17986999.1| cold shock-like protein cspC [Escherichia coli EC4402]
gi|424550741|ref|ZP_17992688.1| cold shock-like protein cspC [Escherichia coli EC4439]
gi|424556987|ref|ZP_17998464.1| cold shock-like protein cspC [Escherichia coli EC4436]
gi|424563335|ref|ZP_18004393.1| cold shock-like protein cspC [Escherichia coli EC4437]
gi|424569407|ref|ZP_18010058.1| cold shock-like protein cspC [Escherichia coli EC4448]
gi|424575533|ref|ZP_18015706.1| cold shock-like protein cspC [Escherichia coli EC1845]
gi|424581392|ref|ZP_18021114.1| cold shock-like protein cspC [Escherichia coli EC1863]
gi|424729888|ref|ZP_18158488.1| hypothetical protein B397_1469 [Citrobacter sp. L17]
gi|424752041|ref|ZP_18180047.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756027|ref|ZP_18183864.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424770334|ref|ZP_18197539.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424816011|ref|ZP_18241162.1| cold shock-like protein CspC [Escherichia fergusonii ECD227]
gi|424831268|ref|ZP_18255996.1| cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|424837817|ref|ZP_18262454.1| cold shock-like protein CspC [Shigella flexneri 5a str. M90T]
gi|424932796|ref|ZP_18351168.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425076088|ref|ZP_18479191.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425082171|ref|ZP_18485268.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425086721|ref|ZP_18489814.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425092214|ref|ZP_18495299.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|425098240|ref|ZP_18501034.1| cold shock-like protein CspC [Escherichia coli 3.4870]
gi|425104420|ref|ZP_18506785.1| cold shock-like protein CspC [Escherichia coli 5.2239]
gi|425110249|ref|ZP_18512246.1| cold shock-like protein cspC [Escherichia coli 6.0172]
gi|425115205|ref|ZP_18517013.1| cold shock-like protein cspC [Escherichia coli 8.0566]
gi|425119924|ref|ZP_18521630.1| cold shock-like protein CspC [Escherichia coli 8.0569]
gi|425126039|ref|ZP_18527303.1| cold shock-like protein CspC [Escherichia coli 8.0586]
gi|425131895|ref|ZP_18532798.1| cold shock-like protein CspC [Escherichia coli 8.2524]
gi|425138263|ref|ZP_18538732.1| cold shock-like protein cspC [Escherichia coli 10.0833]
gi|425144221|ref|ZP_18544282.1| cold shock-like protein CspC [Escherichia coli 10.0869]
gi|425150289|ref|ZP_18549970.1| cold shock-like protein CspC [Escherichia coli 88.0221]
gi|425156134|ref|ZP_18555461.1| cold shock-like protein cspC [Escherichia coli PA34]
gi|425162645|ref|ZP_18561584.1| cold shock-like protein cspC [Escherichia coli FDA506]
gi|425168319|ref|ZP_18566865.1| cold shock-like protein cspC [Escherichia coli FDA507]
gi|425174409|ref|ZP_18572580.1| cold shock-like protein cspC [Escherichia coli FDA504]
gi|425180350|ref|ZP_18578130.1| cold shock-like protein cspC [Escherichia coli FRIK1999]
gi|425186586|ref|ZP_18583945.1| cold shock-like protein cspC [Escherichia coli FRIK1997]
gi|425193455|ref|ZP_18590304.1| cold shock-like protein cspC [Escherichia coli NE1487]
gi|425199845|ref|ZP_18596163.1| cold shock-like protein cspC [Escherichia coli NE037]
gi|425206293|ref|ZP_18602173.1| cold shock-like protein cspC [Escherichia coli FRIK2001]
gi|425212030|ref|ZP_18607516.1| cold shock-like protein cspC [Escherichia coli PA4]
gi|425218159|ref|ZP_18613205.1| cold shock-like protein cspC [Escherichia coli PA23]
gi|425224675|ref|ZP_18619238.1| cold shock-like protein cspC [Escherichia coli PA49]
gi|425230909|ref|ZP_18625037.1| cold shock-like protein cspC [Escherichia coli PA45]
gi|425237059|ref|ZP_18630818.1| cold shock-like protein cspC [Escherichia coli TT12B]
gi|425243121|ref|ZP_18636501.1| cold shock-like protein cspC [Escherichia coli MA6]
gi|425249280|ref|ZP_18642276.1| cold shock-like protein cspC [Escherichia coli 5905]
gi|425255051|ref|ZP_18647644.1| cold shock-like protein cspC [Escherichia coli CB7326]
gi|425261345|ref|ZP_18653432.1| cold shock-like protein cspC [Escherichia coli EC96038]
gi|425267384|ref|ZP_18659068.1| cold shock-like protein cspC [Escherichia coli 5412]
gi|425272933|ref|ZP_18664366.1| cold shock-like protein cspC [Escherichia coli TW15901]
gi|425278065|ref|ZP_18669329.1| cold shock-like protein cspC [Escherichia coli ARS4.2123]
gi|425283415|ref|ZP_18674475.1| cold shock-like protein cspC [Escherichia coli TW00353]
gi|425288698|ref|ZP_18679566.1| cold shock-like protein cspC [Escherichia coli 3006]
gi|425294838|ref|ZP_18685122.1| cold shock-like protein cspC [Escherichia coli PA38]
gi|425300589|ref|ZP_18690533.1| cold shock-like protein cspC [Escherichia coli 07798]
gi|425305371|ref|ZP_18695113.1| cold shock-like protein cspC [Escherichia coli N1]
gi|425311524|ref|ZP_18700769.1| cold shock-like protein cspC [Escherichia coli EC1735]
gi|425317451|ref|ZP_18706304.1| cold shock-like protein cspC [Escherichia coli EC1736]
gi|425323556|ref|ZP_18711989.1| cold shock-like protein cspC [Escherichia coli EC1737]
gi|425329719|ref|ZP_18717686.1| cold shock-like protein cspC [Escherichia coli EC1846]
gi|425335886|ref|ZP_18723376.1| cold shock-like protein cspC [Escherichia coli EC1847]
gi|425342312|ref|ZP_18729292.1| cold shock-like protein cspC [Escherichia coli EC1848]
gi|425348123|ref|ZP_18734695.1| cold shock-like protein cspC [Escherichia coli EC1849]
gi|425354424|ref|ZP_18740569.1| cold shock-like protein cspC [Escherichia coli EC1850]
gi|425360396|ref|ZP_18746129.1| cold shock-like protein cspC [Escherichia coli EC1856]
gi|425366521|ref|ZP_18751808.1| cold shock-like protein cspC [Escherichia coli EC1862]
gi|425372943|ref|ZP_18757678.1| cold shock-like protein cspC [Escherichia coli EC1864]
gi|425379580|ref|ZP_18763692.1| cold shock-like protein cspC [Escherichia coli EC1865]
gi|425385768|ref|ZP_18769416.1| cold shock-like protein cspC [Escherichia coli EC1866]
gi|425392457|ref|ZP_18775656.1| cold shock-like protein cspC [Escherichia coli EC1868]
gi|425398612|ref|ZP_18781401.1| cold shock-like protein cspC [Escherichia coli EC1869]
gi|425404644|ref|ZP_18786975.1| cold shock-like protein cspC [Escherichia coli EC1870]
gi|425411221|ref|ZP_18793064.1| cold shock-like protein cspC [Escherichia coli NE098]
gi|425417528|ref|ZP_18798873.1| cold shock-like protein cspC [Escherichia coli FRIK523]
gi|425422520|ref|ZP_18803700.1| cold shock-like protein cspC [Escherichia coli 0.1288]
gi|425428783|ref|ZP_18809477.1| cold shock-like protein cspC [Escherichia coli 0.1304]
gi|427550186|ref|ZP_18927741.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427633601|ref|ZP_18947006.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427656067|ref|ZP_18951771.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427668434|ref|ZP_18961482.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427766572|ref|ZP_18966649.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|427804953|ref|ZP_18972020.1| cold shock protein [Escherichia coli chi7122]
gi|428148301|ref|ZP_18996187.1| Cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428785434|ref|ZP_19002925.1| Cold shock-like protein cspC (CSP-C) [Erwinia amylovora ACW56400]
gi|428931380|ref|ZP_19004977.1| Cold shock-like protein cspC [Klebsiella pneumoniae JHCK1]
gi|428937911|ref|ZP_19011045.1| Cold shock-like protein cspC [Klebsiella pneumoniae VA360]
gi|428947142|ref|ZP_19019529.1| cold shock-like protein CspC [Escherichia coli 88.1467]
gi|428953379|ref|ZP_19025228.1| cold shock-like protein CspC [Escherichia coli 88.1042]
gi|428959300|ref|ZP_19030680.1| cold shock-like protein CspC [Escherichia coli 89.0511]
gi|428965753|ref|ZP_19036610.1| cold shock-like protein CspC [Escherichia coli 90.0091]
gi|428971670|ref|ZP_19042089.1| cold shock-like protein CspC [Escherichia coli 90.0039]
gi|428978216|ref|ZP_19048105.1| cold shock-like protein CspC [Escherichia coli 90.2281]
gi|428983955|ref|ZP_19053410.1| cold shock-like protein CspC [Escherichia coli 93.0055]
gi|428990125|ref|ZP_19059172.1| cold shock-like protein CspC [Escherichia coli 93.0056]
gi|428995898|ref|ZP_19064579.1| cold shock-like protein CspC [Escherichia coli 94.0618]
gi|429002020|ref|ZP_19070260.1| cold shock-like protein CspC [Escherichia coli 95.0183]
gi|429008269|ref|ZP_19075872.1| cold shock-like protein CspC [Escherichia coli 95.1288]
gi|429014755|ref|ZP_19081724.1| cold shock-like protein CspC [Escherichia coli 95.0943]
gi|429020628|ref|ZP_19087203.1| cold shock-like protein CspC [Escherichia coli 96.0428]
gi|429026669|ref|ZP_19092764.1| cold shock-like protein CspC [Escherichia coli 96.0427]
gi|429032746|ref|ZP_19098352.1| cold shock-like protein CspC [Escherichia coli 96.0939]
gi|429038890|ref|ZP_19104080.1| cold shock-like protein CspC [Escherichia coli 96.0932]
gi|429044833|ref|ZP_19109600.1| cold shock-like protein CspC [Escherichia coli 96.0107]
gi|429050339|ref|ZP_19114942.1| cold shock-like protein CspC [Escherichia coli 97.0003]
gi|429061255|ref|ZP_19125322.1| cold shock-like protein CspC [Escherichia coli 97.0007]
gi|429067347|ref|ZP_19130893.1| cold shock-like protein CspC [Escherichia coli 99.0672]
gi|429073352|ref|ZP_19136643.1| cold shock-like protein cspC [Escherichia coli 99.0678]
gi|429078677|ref|ZP_19141841.1| cold shock-like protein CspC [Escherichia coli 99.0713]
gi|429719331|ref|ZP_19254270.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429724674|ref|ZP_19259541.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429776379|ref|ZP_19308361.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02030]
gi|429781154|ref|ZP_19313086.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783413|ref|ZP_19315329.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02092]
gi|429790785|ref|ZP_19322643.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02093]
gi|429796517|ref|ZP_19328336.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02281]
gi|429798210|ref|ZP_19330012.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02318]
gi|429806723|ref|ZP_19338451.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02913]
gi|429811071|ref|ZP_19342772.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-03439]
gi|429817143|ref|ZP_19348785.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-04080]
gi|429822354|ref|ZP_19353953.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-03943]
gi|429826596|ref|ZP_19357732.1| cold shock-like protein CspC [Escherichia coli 96.0109]
gi|429832869|ref|ZP_19363349.1| cold shock-like protein CspC [Escherichia coli 97.0010]
gi|429912871|ref|ZP_19378827.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429913743|ref|ZP_19379691.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429918785|ref|ZP_19384718.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429924592|ref|ZP_19390506.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429928530|ref|ZP_19394432.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429935082|ref|ZP_19400969.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429940753|ref|ZP_19406627.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429948386|ref|ZP_19414241.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429951031|ref|ZP_19416879.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429954327|ref|ZP_19420163.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432353734|ref|ZP_19597008.1| cold shock-like protein CspC [Escherichia coli KTE2]
gi|432358154|ref|ZP_19601383.1| cold shock-like protein CspC [Escherichia coli KTE4]
gi|432362780|ref|ZP_19605951.1| cold shock-like protein CspC [Escherichia coli KTE5]
gi|432369947|ref|ZP_19613036.1| cold shock-like protein CspC [Escherichia coli KTE10]
gi|432371984|ref|ZP_19615034.1| cold shock-like protein CspC [Escherichia coli KTE11]
gi|432376972|ref|ZP_19619969.1| cold shock-like protein CspC [Escherichia coli KTE12]
gi|432381488|ref|ZP_19624433.1| cold shock-like protein CspC [Escherichia coli KTE15]
gi|432387241|ref|ZP_19630132.1| cold shock-like protein CspC [Escherichia coli KTE16]
gi|432392230|ref|ZP_19635070.1| cold shock-like protein CspC [Escherichia coli KTE21]
gi|432397616|ref|ZP_19640397.1| cold shock-like protein CspC [Escherichia coli KTE25]
gi|432402085|ref|ZP_19644838.1| cold shock-like protein CspC [Escherichia coli KTE26]
gi|432406832|ref|ZP_19649541.1| cold shock-like protein CspC [Escherichia coli KTE28]
gi|432412037|ref|ZP_19654703.1| cold shock-like protein CspC [Escherichia coli KTE39]
gi|432417047|ref|ZP_19659658.1| cold shock-like protein CspC [Escherichia coli KTE44]
gi|432422082|ref|ZP_19664630.1| cold shock-like protein CspC [Escherichia coli KTE178]
gi|432426258|ref|ZP_19668763.1| cold shock-like protein CspC [Escherichia coli KTE181]
gi|432431972|ref|ZP_19674404.1| cold shock-like protein CspC [Escherichia coli KTE187]
gi|432436011|ref|ZP_19678404.1| cold shock-like protein CspC [Escherichia coli KTE188]
gi|432441233|ref|ZP_19683574.1| cold shock-like protein CspC [Escherichia coli KTE189]
gi|432449837|ref|ZP_19692109.1| cold shock-like protein CspC [Escherichia coli KTE193]
gi|432456848|ref|ZP_19699035.1| cold shock-like protein CspC [Escherichia coli KTE201]
gi|432460877|ref|ZP_19703028.1| cold shock-like protein CspC [Escherichia coli KTE204]
gi|432465809|ref|ZP_19707900.1| cold shock-like protein CspC [Escherichia coli KTE205]
gi|432471120|ref|ZP_19713167.1| cold shock-like protein CspC [Escherichia coli KTE206]
gi|432476000|ref|ZP_19718000.1| cold shock-like protein CspC [Escherichia coli KTE208]
gi|432481163|ref|ZP_19723121.1| cold shock-like protein CspC [Escherichia coli KTE210]
gi|432485578|ref|ZP_19727494.1| cold shock-like protein CspC [Escherichia coli KTE212]
gi|432489431|ref|ZP_19731312.1| cold shock-like protein CspC [Escherichia coli KTE213]
gi|432495882|ref|ZP_19737681.1| cold shock-like protein CspC [Escherichia coli KTE214]
gi|432500175|ref|ZP_19741935.1| cold shock-like protein CspC [Escherichia coli KTE216]
gi|432504548|ref|ZP_19746278.1| cold shock-like protein CspC [Escherichia coli KTE220]
gi|432514055|ref|ZP_19751281.1| cold shock-like protein CspC [Escherichia coli KTE224]
gi|432517887|ref|ZP_19755079.1| cold shock-like protein CspC [Escherichia coli KTE228]
gi|432523923|ref|ZP_19761055.1| cold shock-like protein CspC [Escherichia coli KTE230]
gi|432531199|ref|ZP_19768228.1| cold shock-like protein CspC [Escherichia coli KTE233]
gi|432534068|ref|ZP_19771046.1| cold shock-like protein CspC [Escherichia coli KTE234]
gi|432537986|ref|ZP_19774889.1| cold shock-like protein CspC [Escherichia coli KTE235]
gi|432543335|ref|ZP_19780184.1| cold shock-like protein CspC [Escherichia coli KTE236]
gi|432548825|ref|ZP_19785599.1| cold shock-like protein CspC [Escherichia coli KTE237]
gi|432553781|ref|ZP_19790508.1| cold shock-like protein CspC [Escherichia coli KTE47]
gi|432558902|ref|ZP_19795580.1| cold shock-like protein CspC [Escherichia coli KTE49]
gi|432564021|ref|ZP_19800611.1| cold shock-like protein CspC [Escherichia coli KTE51]
gi|432568815|ref|ZP_19805333.1| cold shock-like protein CspC [Escherichia coli KTE53]
gi|432573851|ref|ZP_19810333.1| cold shock-like protein CspC [Escherichia coli KTE55]
gi|432580569|ref|ZP_19816995.1| cold shock-like protein CspC [Escherichia coli KTE56]
gi|432583963|ref|ZP_19820362.1| cold shock-like protein CspC [Escherichia coli KTE57]
gi|432588079|ref|ZP_19824435.1| cold shock-like protein CspC [Escherichia coli KTE58]
gi|432593038|ref|ZP_19829356.1| cold shock-like protein CspC [Escherichia coli KTE60]
gi|432597801|ref|ZP_19834077.1| cold shock-like protein CspC [Escherichia coli KTE62]
gi|432602343|ref|ZP_19838587.1| cold shock-like protein CspC [Escherichia coli KTE66]
gi|432607645|ref|ZP_19843834.1| cold shock-like protein CspC [Escherichia coli KTE67]
gi|432611557|ref|ZP_19847720.1| cold shock-like protein CspC [Escherichia coli KTE72]
gi|432616788|ref|ZP_19852909.1| cold shock-like protein CspC [Escherichia coli KTE75]
gi|432622022|ref|ZP_19858056.1| cold shock-like protein CspC [Escherichia coli KTE76]
gi|432627408|ref|ZP_19863388.1| cold shock-like protein CspC [Escherichia coli KTE77]
gi|432631558|ref|ZP_19867487.1| cold shock-like protein CspC [Escherichia coli KTE80]
gi|432637050|ref|ZP_19872926.1| cold shock-like protein CspC [Escherichia coli KTE81]
gi|432641203|ref|ZP_19877040.1| cold shock-like protein CspC [Escherichia coli KTE83]
gi|432646321|ref|ZP_19882111.1| cold shock-like protein CspC [Escherichia coli KTE86]
gi|432651256|ref|ZP_19887013.1| cold shock-like protein CspC [Escherichia coli KTE87]
gi|432655899|ref|ZP_19891605.1| cold shock-like protein CspC [Escherichia coli KTE93]
gi|432661056|ref|ZP_19896702.1| cold shock-like protein CspC [Escherichia coli KTE111]
gi|432666190|ref|ZP_19901772.1| cold shock-like protein CspC [Escherichia coli KTE116]
gi|432670903|ref|ZP_19906434.1| cold shock-like protein CspC [Escherichia coli KTE119]
gi|432674861|ref|ZP_19910334.1| cold shock-like protein CspC [Escherichia coli KTE142]
gi|432680403|ref|ZP_19915780.1| cold shock-like protein CspC [Escherichia coli KTE143]
gi|432685610|ref|ZP_19920912.1| cold shock-like protein CspC [Escherichia coli KTE156]
gi|432691762|ref|ZP_19926993.1| cold shock-like protein CspC [Escherichia coli KTE161]
gi|432694566|ref|ZP_19929773.1| cold shock-like protein CspC [Escherichia coli KTE162]
gi|432699175|ref|ZP_19934333.1| cold shock-like protein CspC [Escherichia coli KTE169]
gi|432704579|ref|ZP_19939683.1| cold shock-like protein CspC [Escherichia coli KTE171]
gi|432710728|ref|ZP_19945790.1| cold shock-like protein CspC [Escherichia coli KTE6]
gi|432713531|ref|ZP_19948572.1| cold shock-like protein CspC [Escherichia coli KTE8]
gi|432718940|ref|ZP_19953909.1| cold shock-like protein CspC [Escherichia coli KTE9]
gi|432723240|ref|ZP_19958160.1| cold shock-like protein CspC [Escherichia coli KTE17]
gi|432727827|ref|ZP_19962706.1| cold shock-like protein CspC [Escherichia coli KTE18]
gi|432732510|ref|ZP_19967343.1| cold shock-like protein CspC [Escherichia coli KTE45]
gi|432737312|ref|ZP_19972078.1| cold shock-like protein CspC [Escherichia coli KTE42]
gi|432741518|ref|ZP_19976237.1| cold shock-like protein CspC [Escherichia coli KTE23]
gi|432745799|ref|ZP_19980468.1| cold shock-like protein CspC [Escherichia coli KTE43]
gi|432750275|ref|ZP_19984882.1| cold shock-like protein CspC [Escherichia coli KTE29]
gi|432754562|ref|ZP_19989113.1| cold shock-like protein CspC [Escherichia coli KTE22]
gi|432759594|ref|ZP_19994089.1| cold shock-like protein CspC [Escherichia coli KTE46]
gi|432765178|ref|ZP_19999617.1| cold shock-like protein CspC [Escherichia coli KTE48]
gi|432770788|ref|ZP_20005132.1| cold shock-like protein CspC [Escherichia coli KTE50]
gi|432774910|ref|ZP_20009192.1| cold shock-like protein CspC [Escherichia coli KTE54]
gi|432778692|ref|ZP_20012935.1| cold shock-like protein CspC [Escherichia coli KTE59]
gi|432783700|ref|ZP_20017881.1| cold shock-like protein CspC [Escherichia coli KTE63]
gi|432787638|ref|ZP_20021770.1| cold shock-like protein CspC [Escherichia coli KTE65]
gi|432793027|ref|ZP_20027112.1| cold shock-like protein CspC [Escherichia coli KTE78]
gi|432798984|ref|ZP_20033007.1| cold shock-like protein CspC [Escherichia coli KTE79]
gi|432801973|ref|ZP_20035954.1| cold shock-like protein CspC [Escherichia coli KTE84]
gi|432805872|ref|ZP_20039810.1| cold shock-like protein CspC [Escherichia coli KTE91]
gi|432809465|ref|ZP_20043358.1| cold shock-like protein CspC [Escherichia coli KTE101]
gi|432815518|ref|ZP_20049303.1| cold shock-like protein CspC [Escherichia coli KTE115]
gi|432821074|ref|ZP_20054766.1| cold shock-like protein CspC [Escherichia coli KTE118]
gi|432827218|ref|ZP_20060870.1| cold shock-like protein CspC [Escherichia coli KTE123]
gi|432831803|ref|ZP_20065377.1| cold shock-like protein CspC [Escherichia coli KTE135]
gi|432834814|ref|ZP_20068353.1| cold shock-like protein CspC [Escherichia coli KTE136]
gi|432839446|ref|ZP_20072933.1| cold shock-like protein CspC [Escherichia coli KTE140]
gi|432844637|ref|ZP_20077536.1| cold shock-like protein CspC [Escherichia coli KTE141]
gi|432850807|ref|ZP_20081502.1| cold shock-like protein CspC [Escherichia coli KTE144]
gi|432861952|ref|ZP_20086712.1| cold shock-like protein CspC [Escherichia coli KTE146]
gi|432869022|ref|ZP_20089817.1| cold shock-like protein CspC [Escherichia coli KTE147]
gi|432882061|ref|ZP_20098141.1| cold shock-like protein CspC [Escherichia coli KTE154]
gi|432886763|ref|ZP_20100852.1| cold shock-like protein CspC [Escherichia coli KTE158]
gi|432894639|ref|ZP_20106460.1| cold shock-like protein CspC [Escherichia coli KTE165]
gi|432898795|ref|ZP_20109487.1| cold shock-like protein CspC [Escherichia coli KTE192]
gi|432904987|ref|ZP_20113893.1| cold shock-like protein CspC [Escherichia coli KTE194]
gi|432912861|ref|ZP_20118671.1| cold shock-like protein CspC [Escherichia coli KTE190]
gi|432919242|ref|ZP_20123373.1| cold shock-like protein CspC [Escherichia coli KTE173]
gi|432927049|ref|ZP_20128589.1| cold shock-like protein CspC [Escherichia coli KTE175]
gi|432934466|ref|ZP_20133975.1| cold shock-like protein CspC [Escherichia coli KTE184]
gi|432938003|ref|ZP_20136380.1| cold shock-like protein CspC [Escherichia coli KTE183]
gi|432947691|ref|ZP_20142847.1| cold shock-like protein CspC [Escherichia coli KTE196]
gi|432955256|ref|ZP_20147196.1| cold shock-like protein CspC [Escherichia coli KTE197]
gi|432961842|ref|ZP_20151632.1| cold shock-like protein CspC [Escherichia coli KTE202]
gi|432967945|ref|ZP_20156860.1| cold shock-like protein CspC [Escherichia coli KTE203]
gi|432971978|ref|ZP_20160846.1| cold shock-like protein CspC [Escherichia coli KTE207]
gi|432978423|ref|ZP_20167245.1| cold shock-like protein CspC [Escherichia coli KTE209]
gi|432981226|ref|ZP_20170002.1| cold shock-like protein CspC [Escherichia coli KTE211]
gi|432985507|ref|ZP_20174231.1| cold shock-like protein CspC [Escherichia coli KTE215]
gi|432990828|ref|ZP_20179492.1| cold shock-like protein CspC [Escherichia coli KTE217]
gi|432995482|ref|ZP_20184093.1| cold shock-like protein CspC [Escherichia coli KTE218]
gi|433000058|ref|ZP_20188588.1| cold shock-like protein CspC [Escherichia coli KTE223]
gi|433005271|ref|ZP_20193701.1| cold shock-like protein CspC [Escherichia coli KTE227]
gi|433007769|ref|ZP_20196187.1| cold shock-like protein CspC [Escherichia coli KTE229]
gi|433013958|ref|ZP_20202320.1| cold shock-like protein CspC [Escherichia coli KTE104]
gi|433018780|ref|ZP_20207026.1| cold shock-like protein CspC [Escherichia coli KTE105]
gi|433023587|ref|ZP_20211588.1| cold shock-like protein CspC [Escherichia coli KTE106]
gi|433028749|ref|ZP_20216611.1| cold shock-like protein CspC [Escherichia coli KTE109]
gi|433033562|ref|ZP_20221294.1| cold shock-like protein CspC [Escherichia coli KTE112]
gi|433038743|ref|ZP_20226347.1| cold shock-like protein CspC [Escherichia coli KTE113]
gi|433043414|ref|ZP_20230915.1| cold shock-like protein CspC [Escherichia coli KTE117]
gi|433048102|ref|ZP_20235471.1| cold shock-like protein CspC [Escherichia coli KTE120]
gi|433053326|ref|ZP_20240521.1| cold shock-like protein CspC [Escherichia coli KTE122]
gi|433058206|ref|ZP_20245265.1| cold shock-like protein CspC [Escherichia coli KTE124]
gi|433063216|ref|ZP_20250149.1| cold shock-like protein CspC [Escherichia coli KTE125]
gi|433068105|ref|ZP_20254906.1| cold shock-like protein CspC [Escherichia coli KTE128]
gi|433072931|ref|ZP_20259596.1| cold shock-like protein CspC [Escherichia coli KTE129]
gi|433077901|ref|ZP_20264452.1| cold shock-like protein CspC [Escherichia coli KTE131]
gi|433082687|ref|ZP_20269152.1| cold shock-like protein CspC [Escherichia coli KTE133]
gi|433087353|ref|ZP_20273737.1| cold shock-like protein CspC [Escherichia coli KTE137]
gi|433092232|ref|ZP_20278506.1| cold shock-like protein CspC [Escherichia coli KTE138]
gi|433096641|ref|ZP_20282838.1| cold shock-like protein CspC [Escherichia coli KTE139]
gi|433101278|ref|ZP_20287375.1| cold shock-like protein CspC [Escherichia coli KTE145]
gi|433106005|ref|ZP_20291996.1| cold shock-like protein CspC [Escherichia coli KTE148]
gi|433111039|ref|ZP_20296904.1| cold shock-like protein CspC [Escherichia coli KTE150]
gi|433115671|ref|ZP_20301475.1| cold shock-like protein CspC [Escherichia coli KTE153]
gi|433120361|ref|ZP_20306039.1| cold shock-like protein CspC [Escherichia coli KTE157]
gi|433125308|ref|ZP_20310883.1| cold shock-like protein CspC [Escherichia coli KTE160]
gi|433130350|ref|ZP_20315795.1| cold shock-like protein CspC [Escherichia coli KTE163]
gi|433135052|ref|ZP_20320406.1| cold shock-like protein CspC [Escherichia coli KTE166]
gi|433139371|ref|ZP_20324642.1| cold shock-like protein CspC [Escherichia coli KTE167]
gi|433144352|ref|ZP_20329504.1| cold shock-like protein CspC [Escherichia coli KTE168]
gi|433149319|ref|ZP_20334355.1| cold shock-like protein CspC [Escherichia coli KTE174]
gi|433153889|ref|ZP_20338844.1| cold shock-like protein CspC [Escherichia coli KTE176]
gi|433158852|ref|ZP_20343700.1| cold shock-like protein CspC [Escherichia coli KTE177]
gi|433163599|ref|ZP_20348344.1| cold shock-like protein CspC [Escherichia coli KTE179]
gi|433168720|ref|ZP_20353353.1| cold shock-like protein CspC [Escherichia coli KTE180]
gi|433173686|ref|ZP_20358220.1| cold shock-like protein CspC [Escherichia coli KTE232]
gi|433178465|ref|ZP_20362877.1| cold shock-like protein CspC [Escherichia coli KTE82]
gi|433183380|ref|ZP_20367645.1| cold shock-like protein CspC [Escherichia coli KTE85]
gi|433188553|ref|ZP_20372656.1| cold shock-like protein CspC [Escherichia coli KTE88]
gi|433193792|ref|ZP_20377791.1| cold shock-like protein CspC [Escherichia coli KTE90]
gi|433198384|ref|ZP_20382296.1| cold shock-like protein CspC [Escherichia coli KTE94]
gi|433203399|ref|ZP_20387180.1| cold shock-like protein CspC [Escherichia coli KTE95]
gi|433207919|ref|ZP_20391601.1| cold shock-like protein CspC [Escherichia coli KTE97]
gi|433212623|ref|ZP_20396226.1| cold shock-like protein CspC [Escherichia coli KTE99]
gi|433323056|ref|ZP_20400426.1| Cold shock-like protein cspC [Escherichia coli J96]
gi|436637299|ref|ZP_20515996.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436799077|ref|ZP_20523631.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811327|ref|ZP_20530207.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436815699|ref|ZP_20533250.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436847029|ref|ZP_20539661.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436851291|ref|ZP_20541890.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436858056|ref|ZP_20546576.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436865231|ref|ZP_20551198.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436875596|ref|ZP_20557503.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436883281|ref|ZP_20561710.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436887858|ref|ZP_20564187.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436896352|ref|ZP_20569108.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436906331|ref|ZP_20575177.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436911721|ref|ZP_20577550.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436920114|ref|ZP_20582853.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436930421|ref|ZP_20588646.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436935673|ref|ZP_20591113.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942862|ref|ZP_20595808.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436951644|ref|ZP_20600699.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436964647|ref|ZP_20606283.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436971378|ref|ZP_20609771.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436985447|ref|ZP_20614967.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436991585|ref|ZP_20617596.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437012200|ref|ZP_20624713.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437020829|ref|ZP_20627640.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437029880|ref|ZP_20631062.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437042482|ref|ZP_20636073.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437052354|ref|ZP_20641777.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437058193|ref|ZP_20645040.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437069173|ref|ZP_20651128.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437075884|ref|ZP_20654247.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437086554|ref|ZP_20660563.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437095471|ref|ZP_20664575.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437116290|ref|ZP_20669638.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437125904|ref|ZP_20674173.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437134606|ref|ZP_20679030.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437139849|ref|ZP_20682113.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437147011|ref|ZP_20686563.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437155303|ref|ZP_20691522.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437163110|ref|ZP_20696464.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437167293|ref|ZP_20698611.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437177246|ref|ZP_20703726.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437186361|ref|ZP_20709590.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437214329|ref|ZP_20712832.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437261249|ref|ZP_20718319.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437265848|ref|ZP_20720663.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437282077|ref|ZP_20729078.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437286487|ref|ZP_20730141.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437308335|ref|ZP_20735376.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437321151|ref|ZP_20738500.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437335933|ref|ZP_20742850.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437360680|ref|ZP_20748299.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437430188|ref|ZP_20755690.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437447442|ref|ZP_20758951.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437462500|ref|ZP_20762651.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437478430|ref|ZP_20767443.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437497838|ref|ZP_20773572.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437500902|ref|ZP_20774204.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437529771|ref|ZP_20780430.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437553236|ref|ZP_20783878.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437575121|ref|ZP_20789917.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437591942|ref|ZP_20794920.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437601387|ref|ZP_20797631.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437614212|ref|ZP_20801839.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437654352|ref|ZP_20810380.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437657869|ref|ZP_20811304.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437674715|ref|ZP_20816637.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437695459|ref|ZP_20822100.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437711993|ref|ZP_20826985.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437723716|ref|ZP_20829397.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437767192|ref|ZP_20835197.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437813429|ref|ZP_20841831.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437838820|ref|ZP_20846077.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|437849308|ref|ZP_20847250.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|437979936|ref|ZP_20853232.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|438090169|ref|ZP_20860471.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438101100|ref|ZP_20864051.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438112361|ref|ZP_20868958.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|438139834|ref|ZP_20874859.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|440287234|ref|YP_007339999.1| cold shock protein [Enterobacteriaceae bacterium strain FGI 57]
gi|440764772|ref|ZP_20943796.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440768191|ref|ZP_20947164.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440774640|ref|ZP_20953527.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|442590273|ref|ZP_21009055.1| Cold shock protein CspC [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442598234|ref|ZP_21016007.1| Cold shock protein CspC [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|442604488|ref|ZP_21019333.1| Cold shock protein CspC [Escherichia coli Nissle 1917]
gi|443617900|ref|YP_007381756.1| Cold shock-like protein cspC [Escherichia coli APEC O78]
gi|444350871|ref|YP_007387015.1| Cold shock protein CspC [Enterobacter aerogenes EA1509E]
gi|444925036|ref|ZP_21244442.1| cold shock-like protein CspC [Escherichia coli 09BKT078844]
gi|444930887|ref|ZP_21249973.1| cold shock-like protein CspC [Escherichia coli 99.0814]
gi|444936179|ref|ZP_21255017.1| cold shock-like protein CspC [Escherichia coli 99.0815]
gi|444941813|ref|ZP_21260387.1| cold shock-like protein CspC [Escherichia coli 99.0816]
gi|444947444|ref|ZP_21265799.1| cold shock-like protein CspC [Escherichia coli 99.0839]
gi|444953006|ref|ZP_21271147.1| cold shock-like protein CspC [Escherichia coli 99.0848]
gi|444958511|ref|ZP_21276412.1| cold shock-like protein CspC [Escherichia coli 99.1753]
gi|444963771|ref|ZP_21281430.1| cold shock-like protein CspC [Escherichia coli 99.1775]
gi|444969560|ref|ZP_21286967.1| cold shock-like protein CspC [Escherichia coli 99.1793]
gi|444974901|ref|ZP_21292083.1| cold shock-like protein CspC [Escherichia coli 99.1805]
gi|444980396|ref|ZP_21297339.1| cold shock-like protein CspC [Escherichia coli ATCC 700728]
gi|444985718|ref|ZP_21302533.1| cold shock-like protein CspC [Escherichia coli PA11]
gi|444991003|ref|ZP_21307685.1| cold shock-like protein CspC [Escherichia coli PA19]
gi|444996204|ref|ZP_21312743.1| cold shock-like protein CspC [Escherichia coli PA13]
gi|445001838|ref|ZP_21318256.1| cold shock-like protein CspC [Escherichia coli PA2]
gi|445007301|ref|ZP_21323584.1| cold shock-like protein CspC [Escherichia coli PA47]
gi|445012416|ref|ZP_21328557.1| cold shock-like protein CspC [Escherichia coli PA48]
gi|445018155|ref|ZP_21334150.1| cold shock-like protein CspC [Escherichia coli PA8]
gi|445023806|ref|ZP_21339664.1| cold shock-like protein CspC [Escherichia coli 7.1982]
gi|445029047|ref|ZP_21344759.1| cold shock-like protein CspC [Escherichia coli 99.1781]
gi|445034490|ref|ZP_21350052.1| cold shock-like protein CspC [Escherichia coli 99.1762]
gi|445040207|ref|ZP_21355613.1| cold shock-like protein CspC [Escherichia coli PA35]
gi|445045327|ref|ZP_21360619.1| cold shock-like protein CspC [Escherichia coli 3.4880]
gi|445050925|ref|ZP_21366019.1| cold shock-like protein CspC [Escherichia coli 95.0083]
gi|445056735|ref|ZP_21371624.1| cold shock-like protein CspC [Escherichia coli 99.0670]
gi|445129024|ref|ZP_21380572.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|445141350|ref|ZP_21385372.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445157639|ref|ZP_21392947.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445209016|ref|ZP_21401452.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445221403|ref|ZP_21403094.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445267716|ref|ZP_21410169.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445330948|ref|ZP_21413997.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445349281|ref|ZP_21420060.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445364795|ref|ZP_21425035.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|449061438|ref|ZP_21738861.1| Cold shock-like protein cspC [Klebsiella pneumoniae hvKP1]
gi|450189375|ref|ZP_21890531.1| Cold shock-like protein cspC [Escherichia coli SEPT362]
gi|450215314|ref|ZP_21895534.1| Cold shock-like protein cspC [Escherichia coli O08]
gi|450244479|ref|ZP_21900330.1| Cold shock-like protein cspC [Escherichia coli S17]
gi|452119973|ref|YP_007470221.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|452968426|ref|ZP_21966653.1| RNA chaperone/anti-terminator [Escherichia coli O157:H7 str.
EC4009]
gi|76364245|sp|P0A9Y6.2|CSPC_ECOLI RecName: Full=Cold shock-like protein CspC; Short=CSP-C
gi|76364246|sp|P0A9Y9.2|CSPC_SALTY RecName: Full=Cold shock-like protein CspC; Short=CSP-C
gi|85687551|sp|P0A9Y8.2|CSPC_ECO57 RecName: Full=Cold shock-like protein CspC; Short=CSP-C
gi|85687552|sp|P0A9Y7.2|CSPC_ECOL6 RecName: Full=Cold shock-like protein CspC; Short=CSP-C
gi|85687553|sp|P0A9Z0.2|CSPC_SALTI RecName: Full=Cold shock-like protein CspC; Short=CSP-C
gi|334305781|sp|E0J500.1|CSPC_ECOLW RecName: Full=Cold shock-like protein CspC; Short=CSP-C
gi|25296121|pir||AE0727 cold shock-like protein CspC [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|12515869|gb|AAG56812.1|AE005405_3 cold shock protein [Escherichia coli O157:H7 str. EDL933]
gi|26108488|gb|AAN80690.1|AE016761_265 Cold shock-like protein cspC [Escherichia coli CFT073]
gi|460698|dbj|BAA05854.1| CspC (MsmB) [Escherichia coli]
gi|479005|gb|AAA23619.1| cold-shock protein [Escherichia coli]
gi|1736467|dbj|BAA15634.1| stress protein, member of the CspA-family [Escherichia coli str.
K12 substr. W3110]
gi|1788126|gb|AAC74893.1| stress protein, member of the CspA-family [Escherichia coli str.
K-12 substr. MG1655]
gi|13362000|dbj|BAB35956.1| cold shock protein [Escherichia coli O157:H7 str. Sakai]
gi|16420370|gb|AAL20752.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16503023|emb|CAD05519.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137143|gb|AAO68707.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|30041170|gb|AAP16899.1| cold shock protein [Shigella flexneri 2a str. 2457T]
gi|56127501|gb|AAV77007.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62128034|gb|AAX65737.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|73855341|gb|AAZ88048.1| cold shock protein [Shigella sonnei Ss046]
gi|81241359|gb|ABB62069.1| cold shock protein [Shigella dysenteriae Sd197]
gi|91072616|gb|ABE07497.1| cold shock protein CspC [Escherichia coli UTI89]
gi|110343532|gb|ABG69769.1| cold shock-like protein CspC [Escherichia coli 536]
gi|110614931|gb|ABF03598.1| cold shock protein [Shigella flexneri 5 str. 8401]
gi|145318915|gb|ABP61062.1| cold-shock DNA-binding protein family [Enterobacter sp. 638]
gi|150955736|gb|ABR77766.1| cold shock protein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|157066969|gb|ABV06224.1| cold shock protein CspC [Escherichia coli HS]
gi|157079377|gb|ABV19085.1| cold shock protein CspC [Escherichia coli E24377A]
gi|157082615|gb|ABV12293.1| hypothetical protein CKO_01152 [Citrobacter koseri ATCC BAA-895]
gi|160864386|gb|ABX21009.1| hypothetical protein SARI_01103 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|161363016|gb|ABX66784.1| hypothetical protein SPAB_01376 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|169889313|gb|ACB03020.1| stress protein, member of the CspA-family [Escherichia coli str.
K-12 substr. DH10B]
gi|170120949|gb|EDS89880.1| cold shock protein CspC [Escherichia albertii TW07627]
gi|170121694|gb|EDS90625.1| cold shock protein CspC [Escherichia albertii TW07627]
gi|170520615|gb|ACB18793.1| cold shock protein CspC [Escherichia coli SMS-3-5]
gi|187429993|gb|ACD09267.1| cold shock protein CspC [Shigella boydii CDC 3083-94]
gi|188028706|emb|CAO96568.1| Cold shock protein [Erwinia tasmaniensis Et1/99]
gi|188488189|gb|EDU63292.1| cold shock DNA-binding protein [Escherichia coli 53638]
gi|189360403|gb|EDU78822.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC4486]
gi|189364970|gb|EDU83386.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC4501]
gi|189371934|gb|EDU90350.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC869]
gi|190908097|gb|EDV67689.1| cold shock protein CspC [Escherichia coli F11]
gi|194405282|gb|ACF65504.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194405772|gb|ACF65991.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194411450|gb|EDX27798.1| cold shock protein CspC [Escherichia coli B171]
gi|194416827|gb|EDX32952.1| cold shock protein CspC [Shigella dysenteriae 1012]
gi|194457503|gb|EDX46342.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194710803|gb|ACF90024.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195634080|gb|EDX52432.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197093647|emb|CAR59117.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197211666|gb|ACH49063.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197244050|gb|EDY26670.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197940464|gb|ACH77797.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199603563|gb|EDZ02109.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205272280|emb|CAR37158.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205322083|gb|EDZ09922.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205328182|gb|EDZ14946.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205331766|gb|EDZ18530.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205339519|gb|EDZ26283.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342665|gb|EDZ29429.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350669|gb|EDZ37300.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206569872|gb|ACI11648.1| cold shock protein CspC [Klebsiella pneumoniae 342]
gi|206708460|emb|CAR32781.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|208725238|gb|EDZ74945.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC4206]
gi|208730860|gb|EDZ79549.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC4045]
gi|208739435|gb|EDZ87117.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC4042]
gi|209158528|gb|ACI35961.1| cold shock protein CspC [Escherichia coli O157:H7 str. EC4115]
gi|209767848|gb|ACI82236.1| cold shock protein [Escherichia coli]
gi|209767850|gb|ACI82237.1| cold shock protein [Escherichia coli]
gi|209767852|gb|ACI82238.1| cold shock protein [Escherichia coli]
gi|209767854|gb|ACI82239.1| cold shock protein [Escherichia coli]
gi|209767856|gb|ACI82240.1| cold shock protein [Escherichia coli]
gi|209912447|dbj|BAG77521.1| cold shock protein [Escherichia coli SE11]
gi|215265107|emb|CAS09495.1| stress protein, member of the CspA-family [Escherichia coli O127:H6
str. E2348/69]
gi|217318186|gb|EEC26613.1| cold shock protein CspC [Escherichia coli O157:H7 str. TW14588]
gi|218352118|emb|CAU97855.1| stress protein, member of the CspA-family [Escherichia coli 55989]
gi|218356159|emb|CAQ88776.1| stress protein, member of the CspA-family [Escherichia fergusonii
ATCC 35469]
gi|218361164|emb|CAQ98747.1| stress protein, member of the CspA-family [Escherichia coli IAI1]
gi|218365454|emb|CAR03181.1| stress protein, member of the CspA-family [Escherichia coli S88]
gi|218369594|emb|CAR17363.1| stress protein, member of the CspA-family [Escherichia coli IAI39]
gi|218427323|emb|CAR08218.2| stress protein, member of the CspA-family [Escherichia coli ED1a]
gi|218432419|emb|CAR13310.1| stress protein, member of the CspA-family [Escherichia coli UMN026]
gi|222033570|emb|CAP76311.1| Cold shock-like protein cspC [Escherichia coli LF82]
gi|224468200|gb|ACN46030.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224963876|emb|CAX55379.1| Cold shock-like protein CspC [Erwinia pyrifoliae Ep1/96]
gi|226900530|gb|EEH86789.1| cold shock protein [Escherichia sp. 3_2_53FAA]
gi|226907399|gb|EEH93317.1| cold shock-like protein cspC [Citrobacter sp. 30_2]
gi|227837324|gb|EEJ47790.1| cold shock family protein CspC [Escherichia coli 83972]
gi|238547716|dbj|BAH64067.1| cold shock-like protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238863580|gb|ACR65578.1| stress protein, member of the CspA-family [Escherichia coli BW2952]
gi|242377543|emb|CAQ32298.1| stress protein, member of the CspA family; predicted DNA-binding
transcriptional regulator [Escherichia coli BL21(DE3)]
gi|253324267|gb|ACT28869.1| cold-shock DNA-binding domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973783|gb|ACT39454.1| stress protein, member of the CspA-family [Escherichia coli B str.
REL606]
gi|253977977|gb|ACT43647.1| stress protein, member of the CspA-family [Escherichia coli
BL21(DE3)]
gi|254592846|gb|ACT72207.1| stress protein, member of the CspA-family [Escherichia coli O157:H7
str. TW14359]
gi|257754332|dbj|BAI25834.1| stress protein CspC [Escherichia coli O26:H11 str. 11368]
gi|257759315|dbj|BAI30812.1| stress protein CspC [Escherichia coli O103:H2 str. 12009]
gi|257764699|dbj|BAI36194.1| stress protein CspC [Escherichia coli O111:H- str. 11128]
gi|259040741|gb|EEW41829.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|260449056|gb|ACX39478.1| cold-shock DNA-binding domain protein [Escherichia coli DH1]
gi|261247022|emb|CBG24839.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993798|gb|ACY88683.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|281178889|dbj|BAI55219.1| cold shock protein [Escherichia coli SE15]
gi|281600822|gb|ADA73806.1| Cold shock-like protein cspC [Shigella flexneri 2002017]
gi|283478185|emb|CAY74101.1| Cold shock-like protein cspC (CSP-C) [Erwinia pyrifoliae DSM 12163]
gi|284921742|emb|CBG34814.1| cold shock-like protein CspC [Escherichia coli 042]
gi|288317723|gb|EFC56661.1| conserved domain protein [Enterobacter cancerogenus ATCC 35316]
gi|288889425|gb|ADC57743.1| cold-shock DNA-binding domain protein [Klebsiella variicola At-22]
gi|289152142|gb|ADC84001.1| cold shock-like protein [Escherichia coli]
gi|289152144|gb|ADC84002.1| cold shock-like protein [Escherichia coli]
gi|289152146|gb|ADC84003.1| cold shock-like protein [Escherichia coli]
gi|289152148|gb|ADC84004.1| cold shock-like protein [Escherichia coli]
gi|289152150|gb|ADC84005.1| cold shock-like protein [Escherichia coli]
gi|289152152|gb|ADC84006.1| cold shock-like protein [Escherichia coli]
gi|289152154|gb|ADC84007.1| cold shock-like protein [Escherichia coli]
gi|289152156|gb|ADC84008.1| cold shock-like protein [Escherichia coli]
gi|289152160|gb|ADC84010.1| cold shock-like protein [Escherichia coli]
gi|289152162|gb|ADC84011.1| cold shock-like protein [Escherichia coli]
gi|289152164|gb|ADC84012.1| cold shock-like protein [Escherichia coli]
gi|289152166|gb|ADC84013.1| cold shock-like protein [Escherichia coli]
gi|289152168|gb|ADC84014.1| cold shock-like protein [Escherichia coli]
gi|289152170|gb|ADC84015.1| cold shock-like protein [Escherichia coli]
gi|289152172|gb|ADC84016.1| cold shock-like protein [Escherichia coli]
gi|289152174|gb|ADC84017.1| cold shock-like protein [Escherichia coli]
gi|289152176|gb|ADC84018.1| cold shock-like protein [Escherichia coli]
gi|289152178|gb|ADC84019.1| cold shock-like protein [Escherichia coli]
gi|289152180|gb|ADC84020.1| cold shock-like protein [Escherichia coli]
gi|289152182|gb|ADC84021.1| cold shock-like protein [Escherichia coli]
gi|289152184|gb|ADC84022.1| cold shock-like protein [Escherichia coli]
gi|289152186|gb|ADC84023.1| cold shock-like protein [Escherichia coli]
gi|289152188|gb|ADC84024.1| cold shock-like protein [Escherichia coli]
gi|289152190|gb|ADC84025.1| cold shock-like protein [Escherichia coli]
gi|289152192|gb|ADC84026.1| cold shock-like protein [Escherichia coli]
gi|289152194|gb|ADC84027.1| cold shock-like protein [Escherichia coli]
gi|289152196|gb|ADC84028.1| cold shock-like protein [Escherichia coli]
gi|289152198|gb|ADC84029.1| cold shock-like protein [Escherichia coli]
gi|289152200|gb|ADC84030.1| cold shock-like protein [Escherichia coli]
gi|289152202|gb|ADC84031.1| cold shock-like protein [Escherichia coli]
gi|289778242|gb|EFD86239.1| cold shock protein CspG [Klebsiella sp. 1_1_55]
gi|290762877|gb|ADD56838.1| hypothetical protein G2583_2272 [Escherichia coli O55:H7 str.
CB9615]
gi|291072468|gb|EFE10577.1| conserved domain protein [Citrobacter youngae ATCC 29220]
gi|291199525|emb|CBJ46642.1| cold shock-like protein [Erwinia amylovora ATCC 49946]
gi|291323025|gb|EFE62453.1| cold shock protein CspG [Escherichia coli B088]
gi|291427527|gb|EFF00554.1| cold shock protein CspG [Escherichia coli FVEC1412]
gi|291432786|gb|EFF05765.1| cold shock protein CspG [Escherichia coli B185]
gi|291470599|gb|EFF13083.1| cold shock protein cspC [Escherichia coli B354]
gi|291553921|emb|CBA20966.1| Cold shock-like protein cspC (CSP-C) [Erwinia amylovora CFBP1430]
gi|294492772|gb|ADE91528.1| cold shock protein CspC [Escherichia coli IHE3034]
gi|295056302|gb|ADF61040.1| Cold shock-like protein cspC [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295095573|emb|CBK84663.1| Cold shock proteins [Enterobacter cloacae subsp. cloacae NCTC 9394]
gi|298278403|gb|EFI19917.1| cold shock-like protein cspC [Escherichia coli FVEC1302]
gi|299062874|emb|CAX59994.1| cold shock protein [Erwinia billingiae Eb661]
gi|299881920|gb|EFI90131.1| cold shock protein CspE [Escherichia coli MS 196-1]
gi|300297519|gb|EFJ53904.1| cold shock protein CspE [Escherichia coli MS 185-1]
gi|300307364|gb|EFJ61884.1| cold shock protein CspE [Escherichia coli MS 200-1]
gi|300316550|gb|EFJ66334.1| cold shock protein CspE [Escherichia coli MS 175-1]
gi|300357308|gb|EFJ73178.1| cold shock protein CspE [Escherichia coli MS 198-1]
gi|300395440|gb|EFJ78978.1| cold shock protein CspE [Escherichia coli MS 69-1]
gi|300403385|gb|EFJ86923.1| cold shock protein CspE [Escherichia coli MS 84-1]
gi|300406355|gb|EFJ89893.1| cold shock protein CspE [Escherichia coli MS 45-1]
gi|300415174|gb|EFJ98484.1| cold shock protein CspE [Escherichia coli MS 115-1]
gi|300418941|gb|EFK02252.1| cold shock protein CspE [Escherichia coli MS 182-1]
gi|300449309|gb|EFK12929.1| cold shock protein CspE [Escherichia coli MS 116-1]
gi|300456260|gb|EFK19753.1| cold shock protein CspE [Escherichia coli MS 21-1]
gi|300463140|gb|EFK26633.1| cold shock protein CspE [Escherichia coli MS 187-1]
gi|300522015|gb|EFK43084.1| cold shock protein CspE [Escherichia coli MS 119-7]
gi|300530979|gb|EFK52041.1| cold shock protein CspE [Escherichia coli MS 107-1]
gi|300838848|gb|EFK66608.1| cold shock protein CspE [Escherichia coli MS 124-1]
gi|300845833|gb|EFK73593.1| cold shock protein CspE [Escherichia coli MS 78-1]
gi|301076094|gb|EFK90900.1| cold shock protein CspE [Escherichia coli MS 146-1]
gi|301158361|emb|CBW17860.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|305851578|gb|EFM52031.1| Cold shock-like protein cspC [Escherichia coli NC101]
gi|306906236|gb|EFN36753.1| cold-shock DNA-binding domain protein [Escherichia coli W]
gi|307553841|gb|ADN46616.1| cold shock-like protein CspC [Escherichia coli ABU 83972]
gi|307626698|gb|ADN71002.1| Cold shock-like protein cspC [Escherichia coli UM146]
gi|308122106|gb|EFO59368.1| cold shock protein CspE [Escherichia coli MS 145-7]
gi|308748473|gb|ADO48225.1| cold-shock DNA-binding domain protein [Enterobacter cloacae SCF1]
gi|308923651|gb|EFP69154.1| cold shock-like protein cspI [Shigella dysenteriae 1617]
gi|310338145|gb|EFQ03234.1| cold shock-like protein cspI [Escherichia coli 1827-70]
gi|310767829|gb|ADP12779.1| Cold shock-like protein cspC [Erwinia sp. Ejp617]
gi|312172634|emb|CBX80890.1| Cold shock-like protein cspC (CSP-C) [Erwinia amylovora ATCC
BAA-2158]
gi|312288486|gb|EFR16388.1| cold shock-like protein cspI [Escherichia coli 2362-75]
gi|312912826|dbj|BAJ36800.1| cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|312946419|gb|ADR27246.1| cold shock-like protein CspC [Escherichia coli O83:H1 str. NRG
857C]
gi|313649142|gb|EFS13576.1| cold shock-like protein cspI [Shigella flexneri 2a str. 2457T]
gi|315061126|gb|ADT75453.1| stress protein, member of the CspA-family [Escherichia coli W]
gi|315136465|dbj|BAJ43624.1| cold shock-like protein cspC [Escherichia coli DH1]
gi|315257366|gb|EFU37334.1| cold shock protein CspE [Escherichia coli MS 85-1]
gi|315286527|gb|EFU45962.1| cold shock protein CspE [Escherichia coli MS 110-3]
gi|315290383|gb|EFU49759.1| cold shock protein CspE [Escherichia coli MS 153-1]
gi|315299954|gb|EFU59192.1| cold shock protein CspE [Escherichia coli MS 16-3]
gi|316950076|gb|ADU69551.1| cold-shock DNA-binding domain protein [Pantoea sp. At-9b]
gi|320085656|emb|CBY95434.1| Cold shock-like protein cspE CSP-E [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|320173186|gb|EFW48398.1| Cold shock protein CspC [Shigella dysenteriae CDC 74-1112]
gi|320181137|gb|EFW56056.1| Cold shock protein CspC [Shigella boydii ATCC 9905]
gi|320185016|gb|EFW59797.1| Cold shock protein CspC [Shigella flexneri CDC 796-83]
gi|320188522|gb|EFW63184.1| Cold shock protein CspC [Escherichia coli O157:H7 str. EC1212]
gi|320194464|gb|EFW69095.1| Cold shock protein CspC [Escherichia coli WV_060327]
gi|320198003|gb|EFW72611.1| Cold shock protein CspC [Escherichia coli EC4100B]
gi|320641674|gb|EFX11062.1| cold shock-like protein cspc [Escherichia coli O157:H7 str. G5101]
gi|320647033|gb|EFX15866.1| cold shock-like protein cspc [Escherichia coli O157:H- str. 493-89]
gi|320652316|gb|EFX20614.1| cold shock-like protein cspc [Escherichia coli O157:H- str. H 2687]
gi|320657918|gb|EFX25680.1| cold shock-like protein cspc [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320658491|gb|EFX26185.1| cold shock-like protein cspc [Escherichia coli O55:H7 str. USDA
5905]
gi|320668389|gb|EFX35216.1| cold shock-like protein cspc [Escherichia coli O157:H7 str. LSU-61]
gi|321224470|gb|EFX49533.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322616832|gb|EFY13740.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618071|gb|EFY14963.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625742|gb|EFY22561.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626192|gb|EFY23002.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633798|gb|EFY30538.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638952|gb|EFY35645.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640770|gb|EFY37420.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644157|gb|EFY40702.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649229|gb|EFY45667.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322655388|gb|EFY51696.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660856|gb|EFY57087.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662847|gb|EFY59054.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668031|gb|EFY64190.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674207|gb|EFY70301.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675438|gb|EFY71512.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683147|gb|EFY79163.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686841|gb|EFY82819.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322714876|gb|EFZ06447.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323130112|gb|ADX17542.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|323152935|gb|EFZ39204.1| cold shock-like protein cspI [Escherichia coli EPECa14]
gi|323175099|gb|EFZ60713.1| cold shock-like protein cspI [Escherichia coli LT-68]
gi|323180603|gb|EFZ66148.1| cold shock-like protein cspI [Escherichia coli OK1180]
gi|323186429|gb|EFZ71777.1| cold shock-like protein cspI [Escherichia coli OK1357]
gi|323186827|gb|EFZ72146.1| cold shock-like protein cspI [Escherichia coli RN587/1]
gi|323195267|gb|EFZ80447.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199160|gb|EFZ84255.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203311|gb|EFZ88338.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323213768|gb|EFZ98550.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217399|gb|EGA02118.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323223230|gb|EGA07571.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323224674|gb|EGA08947.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231422|gb|EGA15535.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235862|gb|EGA19941.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240431|gb|EGA24474.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245324|gb|EGA29324.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246691|gb|EGA30663.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253546|gb|EGA37374.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258076|gb|EGA41754.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259373|gb|EGA43012.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323266797|gb|EGA50283.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269003|gb|EGA52459.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|323378298|gb|ADX50566.1| cold-shock DNA-binding domain protein [Escherichia coli KO11FL]
gi|323937081|gb|EGB33361.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1520]
gi|323940511|gb|EGB36702.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E482]
gi|323948292|gb|EGB44280.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H120]
gi|323952324|gb|EGB48197.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H252]
gi|323956452|gb|EGB52194.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H263]
gi|323961877|gb|EGB57476.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H489]
gi|323968590|gb|EGB63996.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
M863]
gi|323972670|gb|EGB67873.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
TA007]
gi|323977994|gb|EGB73080.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
TW10509]
gi|324007189|gb|EGB76408.1| cold shock protein CspE [Escherichia coli MS 57-2]
gi|324011600|gb|EGB80819.1| cold shock protein CspE [Escherichia coli MS 60-1]
gi|324018044|gb|EGB87263.1| cold shock protein CspE [Escherichia coli MS 117-3]
gi|324113559|gb|EGC07534.1| cold-shock DNA-binding domain-containing protein [Escherichia
fergusonii B253]
gi|324118883|gb|EGC12772.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1167]
gi|325497031|gb|EGC94890.1| cold shock-like protein CspC [Escherichia fergusonii ECD227]
gi|326342201|gb|EGD65982.1| Cold shock protein CspC [Escherichia coli O157:H7 str. 1044]
gi|326343751|gb|EGD67513.1| Cold shock protein CspC [Escherichia coli O157:H7 str. 1125]
gi|326627557|gb|EGE33900.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|327252944|gb|EGE64598.1| cold shock-like protein cspI [Escherichia coli STEC_7v]
gi|328537175|gb|EGF63445.1| cold shock-like protein CspE [Klebsiella sp. MS 92-3]
gi|330911630|gb|EGH40140.1| cold shock protein CspC [Escherichia coli AA86]
gi|331039231|gb|EGI11451.1| conserved domain protein [Escherichia coli H736]
gi|331044102|gb|EGI16238.1| conserved domain protein [Escherichia coli M605]
gi|331049326|gb|EGI21398.1| conserved domain protein [Escherichia coli M718]
gi|331056115|gb|EGI28124.1| conserved domain protein [Escherichia coli TA206]
gi|331059112|gb|EGI31089.1| conserved domain protein [Escherichia coli TA143]
gi|331063708|gb|EGI35619.1| conserved domain protein [Escherichia coli TA271]
gi|331069553|gb|EGI40940.1| conserved domain protein [Escherichia coli TA280]
gi|331074160|gb|EGI45480.1| conserved domain protein [Escherichia coli H591]
gi|331079540|gb|EGI50737.1| conserved domain protein [Escherichia coli H299]
gi|332089944|gb|EGI95044.1| cold shock-like protein cspI [Shigella boydii 5216-82]
gi|332093283|gb|EGI98342.1| cold shock-like protein cspI [Shigella dysenteriae 155-74]
gi|332096604|gb|EGJ01598.1| cold shock-like protein cspI [Shigella boydii 3594-74]
gi|332101377|gb|EGJ04723.1| cold shock protein [Shigella sp. D9]
gi|332343548|gb|AEE56882.1| cold shock-like protein CspI [Escherichia coli UMNK88]
gi|332760591|gb|EGJ90880.1| cold shock-like protein cspI [Shigella flexneri 2747-71]
gi|332762433|gb|EGJ92698.1| cold shock-like protein cspI [Shigella flexneri 4343-70]
gi|332762911|gb|EGJ93165.1| cold shock-like protein cspI [Shigella flexneri K-671]
gi|332767108|gb|EGJ97303.1| cold shock protein [Shigella flexneri 2930-71]
gi|332988724|gb|AEF07707.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|333003646|gb|EGK23182.1| cold shock-like protein cspI [Shigella flexneri VA-6]
gi|333004280|gb|EGK23811.1| cold shock-like protein cspI [Shigella flexneri K-218]
gi|333006745|gb|EGK26242.1| cold shock-like protein cspI [Shigella flexneri K-272]
gi|333018379|gb|EGK37678.1| cold shock-like protein cspI [Shigella flexneri K-304]
gi|333018661|gb|EGK37954.1| cold shock-like protein cspI [Shigella flexneri K-227]
gi|333388734|gb|EGK59907.1| CspA family transcriptional regulator [Enterobacter hormaechei ATCC
49162]
gi|333969891|gb|AEG36696.1| Cold shock protein [Escherichia coli NA114]
gi|334737052|gb|AEG99427.1| Cold shock-like protein cspC [Enterobacter aerogenes KCTC 2190]
gi|335575551|gb|EGM61828.1| cold shock protein [Shigella flexneri J1713]
gi|338770137|gb|EGP24904.1| Cold shock-like protein CspC [Escherichia coli PCN033]
gi|339415189|gb|AEJ56861.1| cold shock-like protein cspI (CPS-I) [Escherichia coli UMNF18]
gi|339513025|emb|CCC30769.1| cold shock-like protein CspC [Salmonella bongori NCTC 12419]
gi|339762604|gb|AEJ98824.1| Cold shock-like protein cspC [Klebsiella pneumoniae KCTC 2242]
gi|340733942|gb|EGR63072.1| Cold shock-like protein cspC [Escherichia coli O104:H4 str.
01-09591]
gi|340740239|gb|EGR74464.1| Cold shock-like protein cspC [Escherichia coli O104:H4 str.
LB226692]
gi|341918589|gb|EGT68202.1| cspC [Escherichia coli O104:H4 str. C227-11]
gi|342364822|gb|EGU28921.1| Cold shock-like protein cspC [Escherichia coli XH140A]
gi|342930820|gb|EGU99542.1| hypothetical protein HMPREF9439_00538 [Escherichia coli MS 79-10]
gi|344195527|gb|EGV49596.1| Cold shock-like protein cspC [Escherichia coli XH001]
gi|345093625|gb|AEN65261.1| cold-shock DNA-binding domain protein [Enterobacter asburiae LF7a]
gi|345338202|gb|EGW70633.1| cold shock-like protein cspI [Escherichia coli STEC_C165-02]
gi|345339922|gb|EGW72347.1| cold shock-like protein cspI [Escherichia coli STEC_B2F1]
gi|345350080|gb|EGW82355.1| cold shock-like protein cspI [Escherichia coli STEC_94C]
gi|345355263|gb|EGW87474.1| cold shock-like protein cspI [Escherichia coli 3030-1]
gi|345358980|gb|EGW91159.1| cold shock-like protein cspI [Escherichia coli STEC_DG131-3]
gi|345362754|gb|EGW94899.1| cold shock-like protein cspI [Escherichia coli STEC_EH250]
gi|345374209|gb|EGX06162.1| cold shock-like protein cspI [Escherichia coli STEC_MHI813]
gi|345376754|gb|EGX08687.1| cold shock-like protein cspI [Escherichia coli G58-1]
gi|345379467|gb|EGX11379.1| cold shock-like protein cspI [Escherichia coli STEC_H.1.8]
gi|345388229|gb|EGX18040.1| cold shock-like protein cspI [Escherichia coli STEC_S1191]
gi|345393756|gb|EGX23525.1| cold shock-like protein cspI [Escherichia coli TX1999]
gi|349738187|gb|AEQ12893.1| stress protein, member of the CspA-family [Escherichia coli O7:K1
str. CE10]
gi|353075710|gb|EHB41470.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353574782|gb|EHC37713.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353575130|gb|EHC37955.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353579135|gb|EHC40768.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353593632|gb|EHC51343.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353594884|gb|EHC52265.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353604139|gb|EHC59014.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353618702|gb|EHC69309.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353618886|gb|EHC69447.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353623629|gb|EHC72863.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353633490|gb|EHC80282.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353646735|gb|EHC90065.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353646865|gb|EHC90153.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353650502|gb|EHC92847.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353665742|gb|EHD03769.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353666624|gb|EHD04375.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|354861591|gb|EHF22029.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
C236-11]
gi|354868944|gb|EHF29356.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
C227-11]
gi|354871040|gb|EHF31440.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
04-8351]
gi|354872867|gb|EHF33244.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
09-7901]
gi|354881440|gb|EHF41770.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-3677]
gi|354891158|gb|EHF51393.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-4404]
gi|354893991|gb|EHF54188.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-4522]
gi|354896138|gb|EHF56314.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354899113|gb|EHF59263.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-4623]
gi|354900848|gb|EHF60980.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354913877|gb|EHF73865.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C5]
gi|354917606|gb|EHF77569.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354919547|gb|EHF79490.1| cold shock-like protein CspC [Escherichia coli O104:H4 str. 11-4632
C4]
gi|354988336|gb|AER32460.1| Cold shock-like protein cspC [Pantoea ananatis PA13]
gi|355351936|gb|EHG01123.1| cold shock-like protein cspc [Escherichia coli cloneA_i1]
gi|355420420|gb|AER84617.1| cold shock-like protein CspC [Escherichia coli str. 'clone D i2']
gi|355425340|gb|AER89536.1| cold shock-like protein CspC [Escherichia coli str. 'clone D i14']
gi|357205954|gb|AET54000.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357958052|gb|EHJ82830.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|359332300|dbj|BAL38747.1| stress protein, member of the CspA-family [Escherichia coli str.
K-12 substr. MDS42]
gi|363554176|gb|EHL38413.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363557191|gb|EHL41398.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363566355|gb|EHL50372.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363568754|gb|EHL52730.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363570023|gb|EHL53962.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363572872|gb|EHL56760.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363575243|gb|EHL59101.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|363641237|gb|EHL80637.1| cold shock-like protein CspC [Citrobacter freundii 4_7_47CFAA]
gi|363655954|gb|EHL94741.1| cold shock-like protein CspC [Klebsiella sp. 4_1_44FAA]
gi|364518924|gb|AEW62052.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|364569834|gb|EHM47456.1| cold shock-like protein CspE [Yokenella regensburgei ATCC 43003]
gi|365186464|emb|CCF09414.1| cold shock-like protein CspC [Pantoea ananatis LMG 5342]
gi|365911001|gb|AEX06454.1| Cold shock-like protein cspC [Klebsiella oxytoca KCTC 1686]
gi|366059928|gb|EHN24195.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366063820|gb|EHN28031.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366073103|gb|EHN37180.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366075419|gb|EHN39476.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366075750|gb|EHN39802.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366078154|gb|EHN42159.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366082286|gb|EHN46223.1| cold shock-like protein cspc [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366827399|gb|EHN54305.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|371597147|gb|EHN85972.1| cold shock-like protein CspC [Escherichia coli TA124]
gi|371599116|gb|EHN87906.1| cold shock-like protein CspC [Escherichia coli H494]
gi|371611556|gb|EHO00078.1| cold shock-like protein cspC [Escherichia coli E101]
gi|371611971|gb|EHO00489.1| cold shock-like protein cspC [Escherichia coli B093]
gi|371614184|gb|EHO02669.1| cold shock-like protein cspC [Escherichia coli H397]
gi|372204293|gb|EHP17821.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|373243741|gb|EHP63240.1| cold shock-like protein CspC [Escherichia coli 4_1_47FAA]
gi|374353070|gb|AEZ44831.1| Cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|374359063|gb|AEZ40770.1| Cold shock-like protein cspC [Escherichia coli O55:H7 str. RM12579]
gi|375323576|gb|EHS69282.1| Cold shock-like protein cspC [Escherichia coli O157:H43 str. T22]
gi|376383215|gb|EHS95943.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5243]
gi|376383856|gb|EHS96583.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5245]
gi|376385271|gb|EHS97992.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5242]
gi|376395537|gb|EHT08183.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5246]
gi|376399928|gb|EHT12541.1| cold shock-like protein CspC [Klebsiella oxytoca 10-5250]
gi|377542190|dbj|GAB50307.1| cold shock-like protein CspC [Escherichia hermannii NBRC 105704]
gi|377817532|gb|EHU00627.1| stress protein, member of the CspA-family [Pantoea stewartii subsp.
stewartii DC283]
gi|377845353|gb|EHU10375.1| cold shock protein CspC [Escherichia coli DEC1A]
gi|377846382|gb|EHU11394.1| cold shock protein CspC [Escherichia coli DEC1C]
gi|377850148|gb|EHU15116.1| cold shock protein CspC [Escherichia coli DEC1B]
gi|377858639|gb|EHU23478.1| cold shock-like protein CspC [Escherichia coli DEC1D]
gi|377862212|gb|EHU27025.1| cold shock protein CspC [Escherichia coli DEC1E]
gi|377865607|gb|EHU30398.1| cold shock-like protein CspC [Escherichia coli DEC2A]
gi|377876117|gb|EHU40725.1| cold shock-like protein CspC [Escherichia coli DEC2B]
gi|377880212|gb|EHU44783.1| cold shock protein CspC [Escherichia coli DEC2C]
gi|377881735|gb|EHU46292.1| cold shock protein CspC [Escherichia coli DEC2D]
gi|377894021|gb|EHU58446.1| cold shock protein CspC [Escherichia coli DEC2E]
gi|377894983|gb|EHU59396.1| cold shock protein CspC [Escherichia coli DEC3A]
gi|377895683|gb|EHU60094.1| cold shock protein CspC [Escherichia coli DEC3B]
gi|377906640|gb|EHU70882.1| cold shock protein CspC [Escherichia coli DEC3C]
gi|377911975|gb|EHU76140.1| cold shock protein CspC [Escherichia coli DEC3D]
gi|377914699|gb|EHU78821.1| cold shock protein CspC [Escherichia coli DEC3E]
gi|377923782|gb|EHU87743.1| cold shock protein CspC [Escherichia coli DEC3F]
gi|377928357|gb|EHU92268.1| cold shock protein CspC [Escherichia coli DEC4A]
gi|377932929|gb|EHU96775.1| cold shock protein CspC [Escherichia coli DEC4B]
gi|377943963|gb|EHV07672.1| cold shock protein CspC [Escherichia coli DEC4C]
gi|377944510|gb|EHV08212.1| cold shock protein CspC [Escherichia coli DEC4D]
gi|377949946|gb|EHV13577.1| cold shock protein CspC [Escherichia coli DEC4E]
gi|377958892|gb|EHV22404.1| cold shock protein CspC [Escherichia coli DEC4F]
gi|377962169|gb|EHV25632.1| cold shock protein CspC [Escherichia coli DEC5A]
gi|377968847|gb|EHV32238.1| cold shock protein CspC [Escherichia coli DEC5B]
gi|377977161|gb|EHV40462.1| cold shock protein CspC [Escherichia coli DEC5D]
gi|377985772|gb|EHV48984.1| cold shock-like protein CspC [Escherichia coli DEC5E]
gi|377994973|gb|EHV58094.1| cold shock protein CspC [Escherichia coli DEC6B]
gi|377996832|gb|EHV59940.1| cold shock-like protein CspC [Escherichia coli DEC6A]
gi|377998381|gb|EHV61473.1| cold shock-like protein CspC [Escherichia coli DEC6C]
gi|378009366|gb|EHV72322.1| cold shock-like protein CspC [Escherichia coli DEC6D]
gi|378010625|gb|EHV73570.1| cold shock protein CspC [Escherichia coli DEC6E]
gi|378016612|gb|EHV79492.1| cold shock-like protein CspC [Escherichia coli DEC7A]
gi|378024398|gb|EHV87052.1| cold shock protein CspC [Escherichia coli DEC7C]
gi|378030170|gb|EHV92774.1| cold shock protein CspC [Escherichia coli DEC7D]
gi|378034863|gb|EHV97427.1| cold shock protein CspC [Escherichia coli DEC7B]
gi|378039694|gb|EHW02182.1| cold shock-like protein CspC [Escherichia coli DEC7E]
gi|378048519|gb|EHW10873.1| cold shock-like protein CspC [Escherichia coli DEC8A]
gi|378051325|gb|EHW13642.1| cold shock protein CspC [Escherichia coli DEC8B]
gi|378055551|gb|EHW17813.1| cold shock protein CspC [Escherichia coli DEC8C]
gi|378063578|gb|EHW25746.1| cold shock protein CspC [Escherichia coli DEC8D]
gi|378067463|gb|EHW29585.1| cold shock protein CspC [Escherichia coli DEC8E]
gi|378075989|gb|EHW38002.1| cold shock protein CspC [Escherichia coli DEC9A]
gi|378079002|gb|EHW40981.1| cold shock protein CspC [Escherichia coli DEC9B]
gi|378084571|gb|EHW46473.1| cold shock protein CspC [Escherichia coli DEC9C]
gi|378092067|gb|EHW53894.1| cold shock protein CspC [Escherichia coli DEC9D]
gi|378096655|gb|EHW58425.1| cold shock protein CspC [Escherichia coli DEC9E]
gi|378102078|gb|EHW63762.1| cold shock protein CspC [Escherichia coli DEC10A]
gi|378108573|gb|EHW70186.1| cold shock protein CspC [Escherichia coli DEC10B]
gi|378112973|gb|EHW74546.1| cold shock protein CspC [Escherichia coli DEC10C]
gi|378118127|gb|EHW79636.1| cold shock protein CspC [Escherichia coli DEC10D]
gi|378129198|gb|EHW90570.1| cold shock protein CspC [Escherichia coli DEC10E]
gi|378131647|gb|EHW93004.1| cold shock protein CspC [Escherichia coli DEC11A]
gi|378134042|gb|EHW95372.1| cold shock protein CspC [Escherichia coli DEC10F]
gi|378142137|gb|EHX03339.1| cold shock protein CspC [Escherichia coli DEC11B]
gi|378149900|gb|EHX11020.1| cold shock-like protein CspC [Escherichia coli DEC11D]
gi|378151748|gb|EHX12855.1| cold shock-like protein CspC [Escherichia coli DEC11C]
gi|378158591|gb|EHX19609.1| cold shock-like protein CspC [Escherichia coli DEC11E]
gi|378167339|gb|EHX28252.1| cold shock protein CspC [Escherichia coli DEC12B]
gi|378170832|gb|EHX31707.1| cold shock-like protein CspC [Escherichia coli DEC12A]
gi|378172240|gb|EHX33097.1| cold shock-like protein CspC [Escherichia coli DEC12C]
gi|378186729|gb|EHX47352.1| cold shock protein CspC [Escherichia coli DEC12D]
gi|378187357|gb|EHX47969.1| cold shock protein CspC [Escherichia coli DEC13A]
gi|378190004|gb|EHX50590.1| cold shock protein CspC [Escherichia coli DEC12E]
gi|378201980|gb|EHX62420.1| cold shock protein CspC [Escherichia coli DEC13C]
gi|378202219|gb|EHX62658.1| cold shock protein CspC [Escherichia coli DEC13B]
gi|378205210|gb|EHX65625.1| cold shock protein CspC [Escherichia coli DEC13D]
gi|378214053|gb|EHX74362.1| cold shock protein CspC [Escherichia coli DEC13E]
gi|378218613|gb|EHX78884.1| cold shock-like protein CspC [Escherichia coli DEC14A]
gi|378220620|gb|EHX80872.1| cold shock protein CspC [Escherichia coli DEC14B]
gi|378229001|gb|EHX89151.1| cold shock protein CspC [Escherichia coli DEC14C]
gi|378232108|gb|EHX92210.1| cold shock protein CspC [Escherichia coli DEC14D]
gi|378238463|gb|EHX98464.1| cold shock protein CspC [Escherichia coli DEC15A]
gi|378245159|gb|EHY05097.1| cold shock protein CspC [Escherichia coli DEC15B]
gi|378248002|gb|EHY07917.1| cold shock protein CspC [Escherichia coli DEC15C]
gi|378255536|gb|EHY15394.1| cold shock protein CspC [Escherichia coli DEC15D]
gi|378259687|gb|EHY19499.1| cold shock protein CspC [Escherichia coli DEC15E]
gi|379052891|gb|EHY70782.1| cold shock protein CspE [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379985250|emb|CCF88662.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380348390|gb|EIA36672.1| Cold shock-like protein cspC [Escherichia coli SCI-07]
gi|380463346|gb|AFD58749.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381294515|gb|EIC35654.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381300420|gb|EIC41482.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381303042|gb|EIC44071.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381307499|gb|EIC48353.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|381311391|gb|EIC52210.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|383392735|gb|AFH17693.1| cold shock-like protein cspc [Escherichia coli KO11FL]
gi|383405374|gb|AFH11617.1| cold shock-like protein cspc [Escherichia coli W]
gi|383466869|gb|EID61890.1| cold shock-like protein CspC [Shigella flexneri 5a str. M90T]
gi|383798710|gb|AFH45792.1| Cold shock protein CspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|384379421|gb|EIE37289.1| Cold shock-like protein cspC [Escherichia coli J53]
gi|384470083|gb|EIE54208.1| Cold shock-like protein cspC [Escherichia coli AI27]
gi|385157845|gb|EIF19835.1| Cold shock-like protein cspC [Escherichia coli O32:H37 str. P4]
gi|385539567|gb|EIF86399.1| cold shock-like protein CspC [Escherichia coli M919]
gi|385705354|gb|EIG42419.1| cold shock-like protein CspC [Escherichia coli H730]
gi|385713200|gb|EIG50136.1| cold shock-like protein CspC [Escherichia coli B799]
gi|386122067|gb|EIG70680.1| cold shock-like protein CspC [Escherichia sp. 4_1_40B]
gi|386141111|gb|EIG82263.1| cold shock-like protein CspE [Escherichia coli 1.2741]
gi|386148154|gb|EIG94591.1| cold shock-like protein CspE [Escherichia coli 97.0246]
gi|386152165|gb|EIH03454.1| cold shock-like protein CspE [Escherichia coli 5.0588]
gi|386158172|gb|EIH14509.1| cold shock-like protein CspE [Escherichia coli 97.0259]
gi|386160979|gb|EIH22784.1| cold shock-like protein CspE [Escherichia coli 1.2264]
gi|386167650|gb|EIH34166.1| cold shock-like protein CspE [Escherichia coli 96.0497]
gi|386171035|gb|EIH43083.1| cold shock-like protein CspE [Escherichia coli 99.0741]
gi|386180417|gb|EIH57891.1| cold shock-like protein CspE [Escherichia coli 3.2608]
gi|386181395|gb|EIH64158.1| cold shock-like protein CspE [Escherichia coli 93.0624]
gi|386189539|gb|EIH78305.1| cold shock-like protein CspE [Escherichia coli 4.0522]
gi|386194502|gb|EIH88753.1| cold shock-like protein CspE [Escherichia coli JB1-95]
gi|386200766|gb|EIH99756.1| cold shock-like protein CspE [Escherichia coli 96.154]
gi|386204286|gb|EII08797.1| cold shock-like protein CspE [Escherichia coli 5.0959]
gi|386209054|gb|EII19545.1| cold shock-like protein CspE [Escherichia coli 9.0111]
gi|386217672|gb|EII34157.1| cold shock-like protein CspE [Escherichia coli 4.0967]
gi|386224780|gb|EII47115.1| cold shock-like protein CspE [Escherichia coli 2.3916]
gi|386232140|gb|EII59487.1| cold shock-like protein CspE [Escherichia coli 3.3884]
gi|386236413|gb|EII68389.1| cold shock-like protein CspE [Escherichia coli 2.4168]
gi|386240250|gb|EII77174.1| cold shock-like protein CspE [Escherichia coli 3.2303]
gi|386243829|gb|EII85562.1| cold shock-like protein CspE [Escherichia coli 3003]
gi|386253780|gb|EIJ03470.1| cold shock-like protein CspE [Escherichia coli B41]
gi|386257695|gb|EIJ13178.1| cold shock-like protein CspE [Escherichia coli 900105 (10e)]
gi|386796388|gb|AFJ29422.1| cold shock-like protein CspC [Escherichia coli Xuzhou21]
gi|386923891|gb|AFJ46845.1| cold shock protein [Escherichia blattae DSM 4481]
gi|388336386|gb|EIL02930.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CVM9534]
gi|388337296|gb|EIL03798.1| Cold shock-like protein cspC [Escherichia coli O103:H25 str.
CVM9340]
gi|388342663|gb|EIL08697.1| Cold shock-like protein cspC [Escherichia coli O103:H2 str.
CVM9450]
gi|388355473|gb|EIL20304.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CVM9545]
gi|388355733|gb|EIL20555.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CVM9574]
gi|388361738|gb|EIL25815.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CVM9570]
gi|388372534|gb|EIL35955.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM9942]
gi|388373532|gb|EIL36801.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM10026]
gi|388387749|gb|EIL49358.1| Cold shock-like protein cspC [Escherichia coli KD1]
gi|388393399|gb|EIL54781.1| Cold shock-like protein cspC [Escherichia coli 541-15]
gi|388395904|gb|EIL57039.1| Cold shock-like protein cspC [Escherichia coli KD2]
gi|388399331|gb|EIL60132.1| Cold shock-like protein cspC [Escherichia coli 75]
gi|388400018|gb|EIL60788.1| Cold shock-like protein cspC [Escherichia coli 541-1]
gi|388412393|gb|EIL72473.1| Cold shock-like protein cspC [Escherichia coli HM605]
gi|388417573|gb|EIL77414.1| Cold shock-like protein cspC [Escherichia coli 576-1]
gi|388417587|gb|EIL77427.1| Cold shock-like protein cspC [Escherichia coli CUMT8]
gi|388606772|gb|EIM35978.1| Cold shock-like protein cspC [Enterobacter cloacae subsp. cloacae
GS1]
gi|390645064|gb|EIN24248.1| cold shock-like protein cspC [Escherichia coli FDA517]
gi|390645205|gb|EIN24388.1| cold shock-like protein cspC [Escherichia coli FRIK1996]
gi|390645938|gb|EIN25076.1| cold shock-like protein cspC [Escherichia coli FDA505]
gi|390663528|gb|EIN41024.1| cold shock-like protein cspC [Escherichia coli 93-001]
gi|390664901|gb|EIN42229.1| cold shock-like protein cspC [Escherichia coli FRIK1985]
gi|390665959|gb|EIN43165.1| cold shock-like protein cspC [Escherichia coli FRIK1990]
gi|390681519|gb|EIN57312.1| cold shock-like protein cspC [Escherichia coli PA3]
gi|390684562|gb|EIN60173.1| cold shock-like protein cspC [Escherichia coli PA5]
gi|390685542|gb|EIN61012.1| cold shock-like protein cspC [Escherichia coli PA9]
gi|390701391|gb|EIN75615.1| cold shock-like protein cspC [Escherichia coli PA10]
gi|390702957|gb|EIN77008.1| cold shock-like protein cspC [Escherichia coli PA15]
gi|390703740|gb|EIN77735.1| cold shock-like protein cspC [Escherichia coli PA14]
gi|390715779|gb|EIN88615.1| cold shock-like protein cspC [Escherichia coli PA22]
gi|390726926|gb|EIN99354.1| cold shock-like protein cspC [Escherichia coli PA25]
gi|390727356|gb|EIN99773.1| cold shock-like protein cspC [Escherichia coli PA24]
gi|390729628|gb|EIO01788.1| cold shock-like protein cspC [Escherichia coli PA28]
gi|390745169|gb|EIO15989.1| cold shock-like protein cspC [Escherichia coli PA32]
gi|390745941|gb|EIO16716.1| cold shock-like protein cspC [Escherichia coli PA31]
gi|390747486|gb|EIO18039.1| cold shock-like protein cspC [Escherichia coli PA33]
gi|390759366|gb|EIO28764.1| cold shock-like protein cspC [Escherichia coli PA40]
gi|390769849|gb|EIO38745.1| cold shock-like protein cspC [Escherichia coli PA41]
gi|390771464|gb|EIO40142.1| cold shock-like protein cspC [Escherichia coli PA39]
gi|390771804|gb|EIO40459.1| cold shock-like protein cspC [Escherichia coli PA42]
gi|390782749|gb|EIO50383.1| cold shock-like protein cspC [Escherichia coli TW06591]
gi|390790959|gb|EIO58354.1| cold shock-like protein cspC [Escherichia coli TW10246]
gi|390796711|gb|EIO63977.1| cold shock-like protein cspC [Escherichia coli TW07945]
gi|390798366|gb|EIO65562.1| cold shock-like protein cspC [Escherichia coli TW11039]
gi|390808543|gb|EIO75382.1| cold shock-like protein cspC [Escherichia coli TW09109]
gi|390809703|gb|EIO76485.1| cold shock-like protein cspC [Escherichia coli TW09098]
gi|390817085|gb|EIO83545.1| cold shock-like protein cspC [Escherichia coli TW10119]
gi|390829153|gb|EIO94761.1| cold shock-like protein cspC [Escherichia coli EC4203]
gi|390832396|gb|EIO97650.1| cold shock-like protein cspC [Escherichia coli TW09195]
gi|390833973|gb|EIO98949.1| cold shock-like protein cspC [Escherichia coli EC4196]
gi|390849015|gb|EIP12463.1| cold shock-like protein cspC [Escherichia coli TW14301]
gi|390850676|gb|EIP14033.1| cold shock-like protein cspC [Escherichia coli TW14313]
gi|390852153|gb|EIP15322.1| cold shock-like protein cspC [Escherichia coli EC4421]
gi|390863595|gb|EIP25727.1| cold shock-like protein cspC [Escherichia coli EC4422]
gi|390867956|gb|EIP29722.1| cold shock-like protein cspC [Escherichia coli EC4013]
gi|390873676|gb|EIP34857.1| cold shock-like protein cspC [Escherichia coli EC4402]
gi|390880617|gb|EIP41293.1| cold shock-like protein cspC [Escherichia coli EC4439]
gi|390885149|gb|EIP45398.1| cold shock-like protein cspC [Escherichia coli EC4436]
gi|390896499|gb|EIP55885.1| cold shock-like protein cspC [Escherichia coli EC4437]
gi|390900510|gb|EIP59729.1| cold shock-like protein cspC [Escherichia coli EC4448]
gi|390901407|gb|EIP60591.1| cold shock-like protein cspC [Escherichia coli EC1738]
gi|390908757|gb|EIP67558.1| cold shock-like protein cspC [Escherichia coli EC1734]
gi|390921203|gb|EIP79426.1| cold shock-like protein cspC [Escherichia coli EC1863]
gi|390922093|gb|EIP80201.1| cold shock-like protein cspC [Escherichia coli EC1845]
gi|391251122|gb|EIQ10338.1| cold shock-like protein CspC [Shigella flexneri 2850-71]
gi|391253650|gb|EIQ12821.1| cold shock-like protein CspC [Shigella flexneri CCH060]
gi|391254841|gb|EIQ13999.1| cold shock-like protein CspC [Shigella flexneri K-1770]
gi|391264438|gb|EIQ23430.1| cold shock-like protein CspC [Shigella flexneri K-315]
gi|391269836|gb|EIQ28734.1| cold shock-like protein CspC [Shigella flexneri K-404]
gi|391272157|gb|EIQ31014.1| cold shock-like protein CspC [Shigella boydii 965-58]
gi|391280738|gb|EIQ39402.1| cold shock-like protein CspC [Shigella boydii 4444-74]
gi|391285282|gb|EIQ43862.1| cold shock-like protein CspC [Shigella sonnei 3226-85]
gi|391286855|gb|EIQ45389.1| cold shock-like protein CspC [Shigella sonnei 3233-85]
gi|391295305|gb|EIQ53474.1| cold shock protein CspC [Shigella sonnei 4822-66]
gi|391302396|gb|EIQ60258.1| cold shock-like protein CspC [Shigella dysenteriae 225-75]
gi|391306062|gb|EIQ63827.1| cold shock-like protein CspC [Escherichia coli EPECa12]
gi|391313268|gb|EIQ70861.1| cold shock protein CspC [Escherichia coli EPEC C342-62]
gi|391318661|gb|EIQ75770.1| cold shock-like protein CspC [Shigella flexneri 1235-66]
gi|391324185|gb|EIQ80793.1| cold shock-like protein CspC [Shigella flexneri 1235-66]
gi|392325523|gb|AFM60476.1| Cold shock-like protein cspC [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392616626|gb|EIW99058.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392617828|gb|EIX00243.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392732628|gb|EIZ89839.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392735271|gb|EIZ92448.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392739558|gb|EIZ96691.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392743901|gb|EJA00963.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392750784|gb|EJA07744.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392754415|gb|EJA11332.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392760855|gb|EJA17686.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392761100|gb|EJA17930.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392770399|gb|EJA27127.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392773457|gb|EJA30153.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392774753|gb|EJA31448.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392778069|gb|EJA34750.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392787378|gb|EJA43920.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392789621|gb|EJA46125.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392792309|gb|EJA48773.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392795368|gb|EJA51740.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392801111|gb|EJA57341.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392810965|gb|EJA66977.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392813884|gb|EJA69848.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392818361|gb|EJA74245.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392828334|gb|EJA84029.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392829585|gb|EJA85255.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392833272|gb|EJA88887.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392840132|gb|EJA95670.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|394346901|gb|AFN33022.1| Cold shock protein CspC [Klebsiella oxytoca E718]
gi|394383004|gb|EJE60612.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CVM9602]
gi|394383631|gb|EJE61224.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM10224]
gi|394398311|gb|EJE74498.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CVM9634]
gi|394402481|gb|EJE78200.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM10021]
gi|394404960|gb|EJE80266.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CVM9455]
gi|394407997|gb|EJE82730.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CVM9553]
gi|394422989|gb|EJE96288.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM9952]
gi|394424472|gb|EJE97602.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CVM10030]
gi|394716997|gb|EJF22727.1| cold shock-like protein CspC [Citrobacter sp. A1]
gi|394733341|gb|EJF32969.1| Cold shock-like protein cspC [Enterobacter sp. Ag1]
gi|395986408|gb|EJH95572.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395987158|gb|EJH96321.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395990512|gb|EJH99643.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395997238|gb|EJI06279.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|395997649|gb|EJI06689.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396006528|gb|EJI15491.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396008556|gb|EJI17490.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396010797|gb|EJI19709.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396013699|gb|EJI22586.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396021291|gb|EJI30117.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396022672|gb|EJI31485.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396030203|gb|EJI38938.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396039892|gb|EJI48516.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396041107|gb|EJI49730.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396044974|gb|EJI53569.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396053025|gb|EJI61530.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396053335|gb|EJI61832.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396055787|gb|EJI64264.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396062389|gb|EJI70802.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396064858|gb|EJI73241.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|396074214|gb|EJI82505.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396093321|gb|EJI90878.1| cold shock-like protein CspC [Enterobacter radicincitans DSM 16656]
gi|397347126|gb|EJJ40235.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397349219|gb|EJJ42314.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397352223|gb|EJJ45303.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397359201|gb|EJJ51901.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397366514|gb|EJJ59130.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397370761|gb|EJJ63325.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397377355|gb|EJJ69589.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397381752|gb|EJJ73920.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397388418|gb|EJJ80396.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397396624|gb|EJJ88311.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397401664|gb|EJJ93283.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397406752|gb|EJJ98163.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397414381|gb|EJK05581.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397414848|gb|EJK06040.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397423565|gb|EJK14489.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397430732|gb|EJK21420.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397435779|gb|EJK26387.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397438694|gb|EJK29180.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397447198|gb|EJK37398.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397452586|gb|EJK42654.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|397785457|gb|EJK96307.1| cold shock-like protein cspI [Escherichia coli STEC_O31]
gi|397898470|gb|EJL14853.1| cold shock protein CspC [Shigella flexneri 6603-63]
gi|397901758|gb|EJL18098.1| cold shock protein CspC [Shigella sonnei str. Moseley]
gi|400175699|gb|AFP70548.1| Cold shock-like protein cspC [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400216979|gb|EJO47878.1| CspC Protein [Enterobacter sp. SST3]
gi|402285741|gb|EJU34222.1| cold shock-like protein CspI [Klebsiella sp. OBRC7]
gi|402521090|gb|EJW28428.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402523866|gb|EJW31174.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402524977|gb|EJW32274.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402532481|gb|EJW39673.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|402541059|gb|AFQ65208.1| Cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|403193346|dbj|GAB82987.1| cold shock-like protein CspC [Escherichia blattae NBRC 105725]
gi|404291245|gb|EJZ48135.1| cold shock-like protein CspC [Escherichia sp. 1_1_43]
gi|404340693|gb|EJZ67111.1| cold shock protein CspC [Shigella flexneri 1485-80]
gi|405593592|gb|EKB67033.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405600423|gb|EKB73588.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405603445|gb|EKB76566.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405612189|gb|EKB84947.1| cold shock-like protein CspC [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|406777424|gb|AFS56848.1| Cold shock-like protein cspC [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407054010|gb|AFS74061.1| Cold shock-like protein cspC [Escherichia coli O104:H4 str.
2011C-3493]
gi|407065658|gb|AFS86705.1| Cold shock-like protein cspC [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407806983|gb|EKF78234.1| Cold shock-like protein cspC [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|408067087|gb|EKH01530.1| cold shock-like protein cspC [Escherichia coli PA7]
gi|408070868|gb|EKH05224.1| cold shock-like protein cspC [Escherichia coli FRIK920]
gi|408076197|gb|EKH10425.1| cold shock-like protein cspC [Escherichia coli PA34]
gi|408081970|gb|EKH15962.1| cold shock-like protein cspC [Escherichia coli FDA506]
gi|408084441|gb|EKH18213.1| cold shock-like protein cspC [Escherichia coli FDA507]
gi|408093207|gb|EKH26306.1| cold shock-like protein cspC [Escherichia coli FDA504]
gi|408099077|gb|EKH31731.1| cold shock-like protein cspC [Escherichia coli FRIK1999]
gi|408106891|gb|EKH38982.1| cold shock-like protein cspC [Escherichia coli FRIK1997]
gi|408110631|gb|EKH42418.1| cold shock-like protein cspC [Escherichia coli NE1487]
gi|408118063|gb|EKH49237.1| cold shock-like protein cspC [Escherichia coli NE037]
gi|408123561|gb|EKH54300.1| cold shock-like protein cspC [Escherichia coli FRIK2001]
gi|408129682|gb|EKH59901.1| cold shock-like protein cspC [Escherichia coli PA4]
gi|408141004|gb|EKH70484.1| cold shock-like protein cspC [Escherichia coli PA23]
gi|408142679|gb|EKH72028.1| cold shock-like protein cspC [Escherichia coli PA49]
gi|408147812|gb|EKH76721.1| cold shock-like protein cspC [Escherichia coli PA45]
gi|408156157|gb|EKH84364.1| cold shock-like protein cspC [Escherichia coli TT12B]
gi|408163280|gb|EKH91147.1| cold shock-like protein cspC [Escherichia coli MA6]
gi|408165701|gb|EKH93378.1| cold shock-like protein cspC [Escherichia coli 5905]
gi|408176829|gb|EKI03662.1| cold shock-like protein cspC [Escherichia coli CB7326]
gi|408183575|gb|EKI10000.1| cold shock-like protein cspC [Escherichia coli EC96038]
gi|408184405|gb|EKI10728.1| cold shock-like protein cspC [Escherichia coli 5412]
gi|408194192|gb|EKI19680.1| cold shock-like protein cspC [Escherichia coli TW15901]
gi|408202703|gb|EKI27765.1| cold shock-like protein cspC [Escherichia coli TW00353]
gi|408203013|gb|EKI28071.1| cold shock-like protein cspC [Escherichia coli ARS4.2123]
gi|408214866|gb|EKI39274.1| cold shock-like protein cspC [Escherichia coli 3006]
gi|408216736|gb|EKI41050.1| cold shock-like protein cspC [Escherichia coli 07798]
gi|408220357|gb|EKI44413.1| cold shock-like protein cspC [Escherichia coli PA38]
gi|408229353|gb|EKI52785.1| cold shock-like protein cspC [Escherichia coli N1]
gi|408229620|gb|EKI53047.1| cold shock-like protein cspC [Escherichia coli EC1735]
gi|408241107|gb|EKI63757.1| cold shock-like protein cspC [Escherichia coli EC1736]
gi|408245132|gb|EKI67525.1| cold shock-like protein cspC [Escherichia coli EC1737]
gi|408249511|gb|EKI71441.1| cold shock-like protein cspC [Escherichia coli EC1846]
gi|408259997|gb|EKI81132.1| cold shock-like protein cspC [Escherichia coli EC1847]
gi|408261980|gb|EKI82933.1| cold shock-like protein cspC [Escherichia coli EC1848]
gi|408267630|gb|EKI88077.1| cold shock-like protein cspC [Escherichia coli EC1849]
gi|408277552|gb|EKI97339.1| cold shock-like protein cspC [Escherichia coli EC1850]
gi|408279870|gb|EKI99453.1| cold shock-like protein cspC [Escherichia coli EC1856]
gi|408291642|gb|EKJ10235.1| cold shock-like protein cspC [Escherichia coli EC1862]
gi|408293859|gb|EKJ12280.1| cold shock-like protein cspC [Escherichia coli EC1864]
gi|408298372|gb|EKJ16315.1| cold shock-like protein cspC [Escherichia coli EC1865]
gi|408310732|gb|EKJ27773.1| cold shock-like protein cspC [Escherichia coli EC1868]
gi|408311333|gb|EKJ28343.1| cold shock-like protein cspC [Escherichia coli EC1866]
gi|408323572|gb|EKJ39534.1| cold shock-like protein cspC [Escherichia coli EC1869]
gi|408328188|gb|EKJ43805.1| cold shock-like protein cspC [Escherichia coli NE098]
gi|408328951|gb|EKJ44490.1| cold shock-like protein cspC [Escherichia coli EC1870]
gi|408338910|gb|EKJ53530.1| cold shock-like protein cspC [Escherichia coli FRIK523]
gi|408344758|gb|EKJ59107.1| cold shock-like protein cspC [Escherichia coli 0.1288]
gi|408348726|gb|EKJ62807.1| cold shock-like protein cspC [Escherichia coli 0.1304]
gi|408460812|gb|EKJ84590.1| Cold shock-like protein cspC [Escherichia coli AD30]
gi|408551714|gb|EKK28952.1| cold shock-like protein CspC [Escherichia coli 5.2239]
gi|408552543|gb|EKK29715.1| cold shock-like protein CspC [Escherichia coli 3.4870]
gi|408553112|gb|EKK30243.1| cold shock-like protein cspC [Escherichia coli 6.0172]
gi|408569623|gb|EKK45610.1| cold shock-like protein cspC [Escherichia coli 8.0566]
gi|408570865|gb|EKK46821.1| cold shock-like protein CspC [Escherichia coli 8.0569]
gi|408574318|gb|EKK50095.1| cold shock-like protein CspC [Escherichia coli 8.0586]
gi|408582435|gb|EKK57650.1| cold shock-like protein cspC [Escherichia coli 10.0833]
gi|408583101|gb|EKK58279.1| cold shock-like protein CspC [Escherichia coli 8.2524]
gi|408594682|gb|EKK68963.1| cold shock-like protein CspC [Escherichia coli 10.0869]
gi|408598247|gb|EKK72206.1| cold shock-like protein CspC [Escherichia coli 88.0221]
gi|408602283|gb|EKK76004.1| cold shock-like protein cspC [Escherichia coli 8.0416]
gi|408613637|gb|EKK86924.1| cold shock-like protein CspC [Escherichia coli 10.0821]
gi|410112571|emb|CCM85792.1| Cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410118652|emb|CCM91148.1| Cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|410373415|gb|EKP28113.1| Cold shock-like protein cspC [Klebsiella oxytoca M5al]
gi|411771052|gb|EKS54775.1| Cold shock-like protein cspC [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|412963135|emb|CCK47053.1| cold shock protein [Escherichia coli chi7122]
gi|414019234|gb|EKT02853.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414021224|gb|EKT04780.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414047731|gb|EKT29999.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414049223|gb|EKT31442.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414059815|gb|EKT41361.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414065311|gb|EKT46077.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|414708702|emb|CCN30406.1| cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|421938330|gb|EKT95904.1| Cold shock-like protein cspC [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421942532|gb|EKT99859.1| Cold shock-like protein cspC [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421949837|gb|EKU06747.1| Cold shock-like protein cspC [Escherichia coli O111:H11 str.
CFSAN001630]
gi|422895843|gb|EKU35630.1| hypothetical protein B397_1469 [Citrobacter sp. L17]
gi|426276996|gb|EKV54723.1| Cold shock-like protein cspC (CSP-C) [Erwinia amylovora ACW56400]
gi|426306605|gb|EKV68705.1| Cold shock-like protein cspC [Klebsiella pneumoniae VA360]
gi|426308138|gb|EKV70207.1| Cold shock-like protein cspC [Klebsiella pneumoniae JHCK1]
gi|427207675|gb|EKV77843.1| cold shock-like protein CspC [Escherichia coli 88.1042]
gi|427209336|gb|EKV79375.1| cold shock-like protein CspC [Escherichia coli 89.0511]
gi|427210609|gb|EKV80464.1| cold shock-like protein CspC [Escherichia coli 88.1467]
gi|427226398|gb|EKV94988.1| cold shock-like protein CspC [Escherichia coli 90.2281]
gi|427226642|gb|EKV95231.1| cold shock-like protein CspC [Escherichia coli 90.0091]
gi|427229637|gb|EKV97951.1| cold shock-like protein CspC [Escherichia coli 90.0039]
gi|427244806|gb|EKW12115.1| cold shock-like protein CspC [Escherichia coli 93.0056]
gi|427245419|gb|EKW12703.1| cold shock-like protein CspC [Escherichia coli 93.0055]
gi|427247663|gb|EKW14715.1| cold shock-like protein CspC [Escherichia coli 94.0618]
gi|427263483|gb|EKW29241.1| cold shock-like protein CspC [Escherichia coli 95.0943]
gi|427264366|gb|EKW30053.1| cold shock-like protein CspC [Escherichia coli 95.0183]
gi|427266391|gb|EKW31837.1| cold shock-like protein CspC [Escherichia coli 95.1288]
gi|427278612|gb|EKW43068.1| cold shock-like protein CspC [Escherichia coli 96.0428]
gi|427282528|gb|EKW46773.1| cold shock-like protein CspC [Escherichia coli 96.0427]
gi|427285108|gb|EKW49111.1| cold shock-like protein CspC [Escherichia coli 96.0939]
gi|427294344|gb|EKW57529.1| cold shock-like protein CspC [Escherichia coli 96.0932]
gi|427301412|gb|EKW64274.1| cold shock-like protein CspC [Escherichia coli 96.0107]
gi|427302244|gb|EKW65080.1| cold shock-like protein CspC [Escherichia coli 97.0003]
gi|427317798|gb|EKW79689.1| cold shock-like protein CspC [Escherichia coli 97.0007]
gi|427322405|gb|EKW84038.1| cold shock-like protein CspC [Escherichia coli 99.0672]
gi|427330138|gb|EKW91416.1| cold shock-like protein cspC [Escherichia coli 99.0678]
gi|427330534|gb|EKW91804.1| cold shock-like protein CspC [Escherichia coli 99.0713]
gi|427541824|emb|CCM92325.1| Cold shock protein CspC [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|429255213|gb|EKY39548.1| cold shock-like protein CspC [Escherichia coli 96.0109]
gi|429256985|gb|EKY41088.1| cold shock-like protein CspC [Escherichia coli 97.0010]
gi|429346258|gb|EKY83038.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02030]
gi|429348099|gb|EKY84870.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354800|gb|EKY91496.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02092]
gi|429363000|gb|EKY99644.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02093]
gi|429364899|gb|EKZ01517.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02281]
gi|429366623|gb|EKZ03225.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02318]
gi|429377087|gb|EKZ13612.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-02913]
gi|429381598|gb|EKZ18083.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-03943]
gi|429384624|gb|EKZ21081.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-03439]
gi|429393297|gb|EKZ29693.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
11-04080]
gi|429393988|gb|EKZ30374.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429407507|gb|EKZ43760.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429408364|gb|EKZ44602.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429409810|gb|EKZ46036.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429426498|gb|EKZ62587.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429426904|gb|EKZ62991.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429431468|gb|EKZ67517.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429433869|gb|EKZ69899.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429440830|gb|EKZ76807.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429444408|gb|EKZ80354.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429450037|gb|EKZ85935.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429453898|gb|EKZ89766.1| cold shock-like protein CspC [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430875975|gb|ELB99496.1| cold shock-like protein CspC [Escherichia coli KTE2]
gi|430878138|gb|ELC01570.1| cold shock-like protein CspC [Escherichia coli KTE4]
gi|430885574|gb|ELC08445.1| cold shock-like protein CspC [Escherichia coli KTE10]
gi|430887319|gb|ELC10146.1| cold shock-like protein CspC [Escherichia coli KTE5]
gi|430898313|gb|ELC20448.1| cold shock-like protein CspC [Escherichia coli KTE11]
gi|430899264|gb|ELC21369.1| cold shock-like protein CspC [Escherichia coli KTE12]
gi|430907223|gb|ELC28722.1| cold shock-like protein CspC [Escherichia coli KTE16]
gi|430908491|gb|ELC29884.1| cold shock-like protein CspC [Escherichia coli KTE15]
gi|430915720|gb|ELC36798.1| cold shock-like protein CspC [Escherichia coli KTE25]
gi|430920047|gb|ELC40967.1| cold shock-like protein CspC [Escherichia coli KTE21]
gi|430926915|gb|ELC47502.1| cold shock-like protein CspC [Escherichia coli KTE26]
gi|430929591|gb|ELC50100.1| cold shock-like protein CspC [Escherichia coli KTE28]
gi|430935263|gb|ELC55585.1| cold shock-like protein CspC [Escherichia coli KTE39]
gi|430940409|gb|ELC60592.1| cold shock-like protein CspC [Escherichia coli KTE44]
gi|430944841|gb|ELC64930.1| cold shock-like protein CspC [Escherichia coli KTE178]
gi|430953521|gb|ELC72419.1| cold shock-like protein CspC [Escherichia coli KTE187]
gi|430956598|gb|ELC75272.1| cold shock-like protein CspC [Escherichia coli KTE181]
gi|430964433|gb|ELC81880.1| cold shock-like protein CspC [Escherichia coli KTE188]
gi|430967074|gb|ELC84436.1| cold shock-like protein CspC [Escherichia coli KTE189]
gi|430981413|gb|ELC98141.1| cold shock-like protein CspC [Escherichia coli KTE193]
gi|430982730|gb|ELC99419.1| cold shock-like protein CspC [Escherichia coli KTE201]
gi|430989590|gb|ELD06044.1| cold shock-like protein CspC [Escherichia coli KTE204]
gi|430994290|gb|ELD10621.1| cold shock-like protein CspC [Escherichia coli KTE205]
gi|430998338|gb|ELD14579.1| cold shock-like protein CspC [Escherichia coli KTE206]
gi|431005941|gb|ELD20948.1| cold shock-like protein CspC [Escherichia coli KTE208]
gi|431007820|gb|ELD22631.1| cold shock-like protein CspC [Escherichia coli KTE210]
gi|431015975|gb|ELD29522.1| cold shock-like protein CspC [Escherichia coli KTE212]
gi|431021467|gb|ELD34790.1| cold shock-like protein CspC [Escherichia coli KTE213]
gi|431024425|gb|ELD37590.1| cold shock-like protein CspC [Escherichia coli KTE214]
gi|431029045|gb|ELD42077.1| cold shock-like protein CspC [Escherichia coli KTE216]
gi|431039531|gb|ELD50351.1| cold shock-like protein CspC [Escherichia coli KTE220]
gi|431042653|gb|ELD53141.1| cold shock-like protein CspC [Escherichia coli KTE224]
gi|431051935|gb|ELD61597.1| cold shock-like protein CspC [Escherichia coli KTE228]
gi|431053025|gb|ELD62661.1| cold shock-like protein CspC [Escherichia coli KTE230]
gi|431054427|gb|ELD63997.1| cold shock-like protein CspC [Escherichia coli KTE233]
gi|431061218|gb|ELD70537.1| cold shock-like protein CspC [Escherichia coli KTE234]
gi|431069900|gb|ELD78220.1| cold shock-like protein CspC [Escherichia coli KTE235]
gi|431074934|gb|ELD82471.1| cold shock-like protein CspC [Escherichia coli KTE236]
gi|431080645|gb|ELD87440.1| cold shock-like protein CspC [Escherichia coli KTE237]
gi|431085081|gb|ELD91204.1| cold shock-like protein CspC [Escherichia coli KTE47]
gi|431091953|gb|ELD97661.1| cold shock-like protein CspC [Escherichia coli KTE49]
gi|431094613|gb|ELE00244.1| cold shock-like protein CspC [Escherichia coli KTE51]
gi|431100666|gb|ELE05636.1| cold shock-like protein CspC [Escherichia coli KTE53]
gi|431105400|gb|ELE09735.1| cold shock-like protein CspC [Escherichia coli KTE56]
gi|431108562|gb|ELE12534.1| cold shock-like protein CspC [Escherichia coli KTE55]
gi|431116282|gb|ELE19730.1| cold shock-like protein CspC [Escherichia coli KTE57]
gi|431120412|gb|ELE23410.1| cold shock-like protein CspC [Escherichia coli KTE58]
gi|431128016|gb|ELE30308.1| cold shock-like protein CspC [Escherichia coli KTE60]
gi|431130668|gb|ELE32751.1| cold shock-like protein CspC [Escherichia coli KTE62]
gi|431138743|gb|ELE40555.1| cold shock-like protein CspC [Escherichia coli KTE67]
gi|431140917|gb|ELE42682.1| cold shock-like protein CspC [Escherichia coli KTE66]
gi|431148981|gb|ELE50254.1| cold shock-like protein CspC [Escherichia coli KTE72]
gi|431155028|gb|ELE55789.1| cold shock-like protein CspC [Escherichia coli KTE75]
gi|431159721|gb|ELE60265.1| cold shock-like protein CspC [Escherichia coli KTE76]
gi|431164101|gb|ELE64502.1| cold shock-like protein CspC [Escherichia coli KTE77]
gi|431171026|gb|ELE71207.1| cold shock-like protein CspC [Escherichia coli KTE80]
gi|431172039|gb|ELE72190.1| cold shock-like protein CspC [Escherichia coli KTE81]
gi|431180358|gb|ELE80245.1| cold shock-like protein CspC [Escherichia coli KTE86]
gi|431183468|gb|ELE83284.1| cold shock-like protein CspC [Escherichia coli KTE83]
gi|431191125|gb|ELE90510.1| cold shock-like protein CspC [Escherichia coli KTE87]
gi|431191957|gb|ELE91331.1| cold shock-like protein CspC [Escherichia coli KTE93]
gi|431200172|gb|ELE98898.1| cold shock-like protein CspC [Escherichia coli KTE111]
gi|431201565|gb|ELF00262.1| cold shock-like protein CspC [Escherichia coli KTE116]
gi|431210977|gb|ELF08960.1| cold shock-like protein CspC [Escherichia coli KTE119]
gi|431215362|gb|ELF13058.1| cold shock-like protein CspC [Escherichia coli KTE142]
gi|431221333|gb|ELF18654.1| cold shock-like protein CspC [Escherichia coli KTE143]
gi|431222645|gb|ELF19921.1| cold shock-like protein CspC [Escherichia coli KTE156]
gi|431227237|gb|ELF24374.1| cold shock-like protein CspC [Escherichia coli KTE161]
gi|431234765|gb|ELF30159.1| cold shock-like protein CspC [Escherichia coli KTE162]
gi|431243885|gb|ELF38213.1| cold shock-like protein CspC [Escherichia coli KTE171]
gi|431244424|gb|ELF38732.1| cold shock-like protein CspC [Escherichia coli KTE169]
gi|431249520|gb|ELF43675.1| cold shock-like protein CspC [Escherichia coli KTE6]
gi|431257334|gb|ELF50258.1| cold shock-like protein CspC [Escherichia coli KTE8]
gi|431262752|gb|ELF54741.1| cold shock-like protein CspC [Escherichia coli KTE9]
gi|431265794|gb|ELF57356.1| cold shock-like protein CspC [Escherichia coli KTE17]
gi|431273516|gb|ELF64590.1| cold shock-like protein CspC [Escherichia coli KTE18]
gi|431275697|gb|ELF66724.1| cold shock-like protein CspC [Escherichia coli KTE45]
gi|431283209|gb|ELF74068.1| cold shock-like protein CspC [Escherichia coli KTE23]
gi|431284412|gb|ELF75270.1| cold shock-like protein CspC [Escherichia coli KTE42]
gi|431291936|gb|ELF82432.1| cold shock-like protein CspC [Escherichia coli KTE43]
gi|431297192|gb|ELF86850.1| cold shock-like protein CspC [Escherichia coli KTE29]
gi|431302763|gb|ELF91942.1| cold shock-like protein CspC [Escherichia coli KTE22]
gi|431308767|gb|ELF97046.1| cold shock-like protein CspC [Escherichia coli KTE46]
gi|431310939|gb|ELF99119.1| cold shock-like protein CspC [Escherichia coli KTE48]
gi|431315988|gb|ELG03887.1| cold shock-like protein CspC [Escherichia coli KTE50]
gi|431318625|gb|ELG06320.1| cold shock-like protein CspC [Escherichia coli KTE54]
gi|431326845|gb|ELG14190.1| cold shock-like protein CspC [Escherichia coli KTE59]
gi|431329568|gb|ELG16854.1| cold shock-like protein CspC [Escherichia coli KTE63]
gi|431337355|gb|ELG24443.1| cold shock-like protein CspC [Escherichia coli KTE65]
gi|431339771|gb|ELG26825.1| cold shock-like protein CspC [Escherichia coli KTE78]
gi|431343851|gb|ELG30807.1| cold shock-like protein CspC [Escherichia coli KTE79]
gi|431348950|gb|ELG35792.1| cold shock-like protein CspC [Escherichia coli KTE84]
gi|431354993|gb|ELG41707.1| cold shock-like protein CspC [Escherichia coli KTE91]
gi|431362233|gb|ELG48811.1| cold shock-like protein CspC [Escherichia coli KTE101]
gi|431364574|gb|ELG51105.1| cold shock-like protein CspC [Escherichia coli KTE115]
gi|431367921|gb|ELG54389.1| cold shock-like protein CspC [Escherichia coli KTE118]
gi|431372467|gb|ELG58129.1| cold shock-like protein CspC [Escherichia coli KTE123]
gi|431375773|gb|ELG61096.1| cold shock-like protein CspC [Escherichia coli KTE135]
gi|431385174|gb|ELG69161.1| cold shock-like protein CspC [Escherichia coli KTE136]
gi|431389598|gb|ELG73309.1| cold shock-like protein CspC [Escherichia coli KTE140]
gi|431394964|gb|ELG78477.1| cold shock-like protein CspC [Escherichia coli KTE141]
gi|431400129|gb|ELG83511.1| cold shock-like protein CspC [Escherichia coli KTE144]
gi|431405699|gb|ELG88932.1| cold shock-like protein CspC [Escherichia coli KTE146]
gi|431410938|gb|ELG94081.1| cold shock-like protein CspC [Escherichia coli KTE147]
gi|431411567|gb|ELG94678.1| cold shock-like protein CspC [Escherichia coli KTE154]
gi|431416808|gb|ELG99279.1| cold shock-like protein CspC [Escherichia coli KTE158]
gi|431422552|gb|ELH04744.1| cold shock-like protein CspC [Escherichia coli KTE165]
gi|431426447|gb|ELH08491.1| cold shock-like protein CspC [Escherichia coli KTE192]
gi|431433287|gb|ELH14959.1| cold shock-like protein CspC [Escherichia coli KTE194]
gi|431440290|gb|ELH21619.1| cold shock-like protein CspC [Escherichia coli KTE190]
gi|431444556|gb|ELH25578.1| cold shock-like protein CspC [Escherichia coli KTE173]
gi|431445276|gb|ELH26203.1| cold shock-like protein CspC [Escherichia coli KTE175]
gi|431453447|gb|ELH33854.1| cold shock-like protein CspC [Escherichia coli KTE184]
gi|431457669|gb|ELH38006.1| cold shock-like protein CspC [Escherichia coli KTE196]
gi|431464087|gb|ELH44209.1| cold shock-like protein CspC [Escherichia coli KTE183]
gi|431467927|gb|ELH47933.1| cold shock-like protein CspC [Escherichia coli KTE197]
gi|431471062|gb|ELH50955.1| cold shock-like protein CspC [Escherichia coli KTE203]
gi|431474798|gb|ELH54604.1| cold shock-like protein CspC [Escherichia coli KTE202]
gi|431480595|gb|ELH60314.1| cold shock-like protein CspC [Escherichia coli KTE209]
gi|431482679|gb|ELH62381.1| cold shock-like protein CspC [Escherichia coli KTE207]
gi|431491981|gb|ELH71584.1| cold shock-like protein CspC [Escherichia coli KTE211]
gi|431494910|gb|ELH74496.1| cold shock-like protein CspC [Escherichia coli KTE217]
gi|431500944|gb|ELH79930.1| cold shock-like protein CspC [Escherichia coli KTE215]
gi|431507195|gb|ELH85481.1| cold shock-like protein CspC [Escherichia coli KTE218]
gi|431510075|gb|ELH88322.1| cold shock-like protein CspC [Escherichia coli KTE223]
gi|431515176|gb|ELH93003.1| cold shock-like protein CspC [Escherichia coli KTE227]
gi|431524302|gb|ELI01249.1| cold shock-like protein CspC [Escherichia coli KTE229]
gi|431531944|gb|ELI08599.1| cold shock-like protein CspC [Escherichia coli KTE104]
gi|431533718|gb|ELI10217.1| cold shock-like protein CspC [Escherichia coli KTE105]
gi|431537238|gb|ELI13386.1| cold shock-like protein CspC [Escherichia coli KTE106]
gi|431543858|gb|ELI18824.1| cold shock-like protein CspC [Escherichia coli KTE109]
gi|431552203|gb|ELI26165.1| cold shock-like protein CspC [Escherichia coli KTE113]
gi|431553552|gb|ELI27478.1| cold shock-like protein CspC [Escherichia coli KTE112]
gi|431556745|gb|ELI30520.1| cold shock-like protein CspC [Escherichia coli KTE117]
gi|431566208|gb|ELI39247.1| cold shock-like protein CspC [Escherichia coli KTE120]
gi|431570849|gb|ELI43757.1| cold shock-like protein CspC [Escherichia coli KTE124]
gi|431571722|gb|ELI44592.1| cold shock-like protein CspC [Escherichia coli KTE122]
gi|431583050|gb|ELI55060.1| cold shock-like protein CspC [Escherichia coli KTE125]
gi|431585797|gb|ELI57744.1| cold shock-like protein CspC [Escherichia coli KTE128]
gi|431589052|gb|ELI60271.1| cold shock-like protein CspC [Escherichia coli KTE129]
gi|431597572|gb|ELI67478.1| cold shock-like protein CspC [Escherichia coli KTE131]
gi|431603014|gb|ELI72441.1| cold shock-like protein CspC [Escherichia coli KTE133]
gi|431607073|gb|ELI76444.1| cold shock-like protein CspC [Escherichia coli KTE137]
gi|431610778|gb|ELI80062.1| cold shock-like protein CspC [Escherichia coli KTE138]
gi|431616902|gb|ELI85925.1| cold shock-like protein CspC [Escherichia coli KTE139]
gi|431620408|gb|ELI89285.1| cold shock-like protein CspC [Escherichia coli KTE145]
gi|431628343|gb|ELI96719.1| cold shock-like protein CspC [Escherichia coli KTE150]
gi|431629229|gb|ELI97595.1| cold shock-like protein CspC [Escherichia coli KTE148]
gi|431635197|gb|ELJ03412.1| cold shock-like protein CspC [Escherichia coli KTE153]
gi|431643456|gb|ELJ11148.1| cold shock-like protein CspC [Escherichia coli KTE157]
gi|431646693|gb|ELJ14185.1| cold shock-like protein CspC [Escherichia coli KTE160]
gi|431647398|gb|ELJ14882.1| cold shock-like protein CspC [Escherichia coli KTE163]
gi|431657915|gb|ELJ24877.1| cold shock-like protein CspC [Escherichia coli KTE166]
gi|431661749|gb|ELJ28561.1| cold shock-like protein CspC [Escherichia coli KTE167]
gi|431662898|gb|ELJ29666.1| cold shock-like protein CspC [Escherichia coli KTE168]
gi|431671983|gb|ELJ38256.1| cold shock-like protein CspC [Escherichia coli KTE174]
gi|431675346|gb|ELJ41491.1| cold shock-like protein CspC [Escherichia coli KTE176]
gi|431679540|gb|ELJ45452.1| cold shock-like protein CspC [Escherichia coli KTE177]
gi|431688686|gb|ELJ54204.1| cold shock-like protein CspC [Escherichia coli KTE179]
gi|431689044|gb|ELJ54561.1| cold shock-like protein CspC [Escherichia coli KTE180]
gi|431693576|gb|ELJ58988.1| cold shock-like protein CspC [Escherichia coli KTE232]
gi|431704829|gb|ELJ69454.1| cold shock-like protein CspC [Escherichia coli KTE82]
gi|431706596|gb|ELJ71166.1| cold shock-like protein CspC [Escherichia coli KTE88]
gi|431707852|gb|ELJ72381.1| cold shock-like protein CspC [Escherichia coli KTE85]
gi|431717094|gb|ELJ81196.1| cold shock-like protein CspC [Escherichia coli KTE90]
gi|431722467|gb|ELJ86433.1| cold shock-like protein CspC [Escherichia coli KTE95]
gi|431723050|gb|ELJ87012.1| cold shock-like protein CspC [Escherichia coli KTE94]
gi|431730686|gb|ELJ94248.1| cold shock-like protein CspC [Escherichia coli KTE97]
gi|431734905|gb|ELJ98281.1| cold shock-like protein CspC [Escherichia coli KTE99]
gi|432348224|gb|ELL42675.1| Cold shock-like protein cspC [Escherichia coli J96]
gi|434940033|gb|ELL46743.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434957654|gb|ELL51282.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434960137|gb|ELL53544.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434963958|gb|ELL56980.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434973815|gb|ELL66203.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434977193|gb|ELL69342.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434986593|gb|ELL78244.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434990208|gb|ELL81758.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434995187|gb|ELL86504.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|434996266|gb|ELL87582.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435001726|gb|ELL92815.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435009568|gb|ELM00354.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435014908|gb|ELM05465.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435016241|gb|ELM06767.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435025966|gb|ELM16097.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435028179|gb|ELM18259.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435032076|gb|ELM22020.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435038511|gb|ELM28292.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435043061|gb|ELM32778.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435048504|gb|ELM38069.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435052111|gb|ELM41613.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435057667|gb|ELM47036.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435062287|gb|ELM51469.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435063520|gb|ELM52668.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435068162|gb|ELM57191.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435079457|gb|ELM68168.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435082914|gb|ELM71525.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435084407|gb|ELM72993.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435090954|gb|ELM79355.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435092591|gb|ELM80946.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435094006|gb|ELM82345.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435102700|gb|ELM90803.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435105181|gb|ELM93218.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435109848|gb|ELM97794.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435114121|gb|ELN01939.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435116985|gb|ELN04697.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435120085|gb|ELN07687.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435131254|gb|ELN18481.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435134641|gb|ELN21767.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435138171|gb|ELN25198.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435142360|gb|ELN29271.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435151915|gb|ELN38554.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435154926|gb|ELN41484.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435158736|gb|ELN45115.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435163705|gb|ELN49841.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435168695|gb|ELN54527.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435177212|gb|ELN62544.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435184384|gb|ELN69313.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435185930|gb|ELN70786.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435196749|gb|ELN81073.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435197898|gb|ELN82147.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435199328|gb|ELN83436.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435202898|gb|ELN86696.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435209473|gb|ELN92793.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435210516|gb|ELN93770.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435219166|gb|ELO01529.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435221249|gb|ELO03522.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435224923|gb|ELO06862.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435239181|gb|ELO19788.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435244883|gb|ELO24990.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435245086|gb|ELO25173.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435245499|gb|ELO25584.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435253552|gb|ELO33022.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435261157|gb|ELO40318.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435263868|gb|ELO42901.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435264464|gb|ELO43380.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435271065|gb|ELO49545.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435277735|gb|ELO55667.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435277958|gb|ELO55836.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435287888|gb|ELO64993.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435293483|gb|ELO70176.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435296659|gb|ELO73022.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435298190|gb|ELO74432.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435307487|gb|ELO82625.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435316740|gb|ELO89853.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435324672|gb|ELO96600.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435330439|gb|ELP01705.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|435338315|gb|ELP07637.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435338494|gb|ELP07746.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|436412863|gb|ELP10801.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436415455|gb|ELP13374.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436418071|gb|ELP15957.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440046756|gb|AGB77814.1| cold shock protein [Enterobacteriaceae bacterium strain FGI 57]
gi|441609554|emb|CCP94968.1| Cold shock protein CspC [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441653247|emb|CCQ01710.1| Cold shock protein CspC [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441714745|emb|CCQ05310.1| Cold shock protein CspC [Escherichia coli Nissle 1917]
gi|443422408|gb|AGC87312.1| Cold shock-like protein cspC [Escherichia coli APEC O78]
gi|443901701|emb|CCG29475.1| Cold shock protein CspC [Enterobacter aerogenes EA1509E]
gi|444539981|gb|ELV19688.1| cold shock-like protein CspC [Escherichia coli 99.0814]
gi|444542784|gb|ELV22120.1| cold shock-like protein CspC [Escherichia coli 09BKT078844]
gi|444548770|gb|ELV27126.1| cold shock-like protein CspC [Escherichia coli 99.0815]
gi|444559836|gb|ELV37037.1| cold shock-like protein CspC [Escherichia coli 99.0839]
gi|444561774|gb|ELV38877.1| cold shock-like protein CspC [Escherichia coli 99.0816]
gi|444565873|gb|ELV42716.1| cold shock-like protein CspC [Escherichia coli 99.0848]
gi|444575573|gb|ELV51809.1| cold shock-like protein CspC [Escherichia coli 99.1753]
gi|444579602|gb|ELV55588.1| cold shock-like protein CspC [Escherichia coli 99.1775]
gi|444581700|gb|ELV57538.1| cold shock-like protein CspC [Escherichia coli 99.1793]
gi|444595298|gb|ELV70402.1| cold shock-like protein CspC [Escherichia coli PA11]
gi|444595478|gb|ELV70580.1| cold shock-like protein CspC [Escherichia coli ATCC 700728]
gi|444598205|gb|ELV73141.1| cold shock-like protein CspC [Escherichia coli 99.1805]
gi|444609124|gb|ELV83583.1| cold shock-like protein CspC [Escherichia coli PA19]
gi|444609495|gb|ELV83953.1| cold shock-like protein CspC [Escherichia coli PA13]
gi|444617397|gb|ELV91513.1| cold shock-like protein CspC [Escherichia coli PA2]
gi|444626306|gb|ELW00102.1| cold shock-like protein CspC [Escherichia coli PA47]
gi|444626687|gb|ELW00479.1| cold shock-like protein CspC [Escherichia coli PA48]
gi|444631867|gb|ELW05450.1| cold shock-like protein CspC [Escherichia coli PA8]
gi|444641158|gb|ELW14397.1| cold shock-like protein CspC [Escherichia coli 7.1982]
gi|444644093|gb|ELW17217.1| cold shock-like protein CspC [Escherichia coli 99.1781]
gi|444647366|gb|ELW20340.1| cold shock-like protein CspC [Escherichia coli 99.1762]
gi|444655978|gb|ELW28514.1| cold shock-like protein CspC [Escherichia coli PA35]
gi|444662793|gb|ELW35045.1| cold shock-like protein CspC [Escherichia coli 3.4880]
gi|444667602|gb|ELW39636.1| cold shock-like protein CspC [Escherichia coli 95.0083]
gi|444670988|gb|ELW42827.1| cold shock-like protein CspC [Escherichia coli 99.0670]
gi|444846434|gb|ELX71610.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444851052|gb|ELX76147.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444854334|gb|ELX79398.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444860663|gb|ELX85572.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444870199|gb|ELX94725.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444875779|gb|ELX99976.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444877672|gb|ELY01811.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444883140|gb|ELY07045.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444888176|gb|ELY11789.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|448873037|gb|EMB08156.1| Cold shock-like protein cspC [Klebsiella pneumoniae hvKP1]
gi|449318963|gb|EMD09020.1| Cold shock-like protein cspC [Escherichia coli O08]
gi|449321164|gb|EMD11179.1| Cold shock-like protein cspC [Escherichia coli S17]
gi|449321891|gb|EMD11898.1| Cold shock-like protein cspC [Escherichia coli SEPT362]
gi|449327970|gb|AGE94271.1| cold shock protein CspC [Citrobacter amalonaticus Y19]
gi|451908977|gb|AGF80783.1| Cold shock-like protein cspC [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|455645843|gb|EMF24886.1| Cold shock-like protein cspC [Citrobacter freundii GTC 09479]
Length = 69
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|345298312|ref|YP_004827670.1| cold-shock DNA-binding domain-containing protein [Enterobacter
asburiae LF7a]
gi|345092249|gb|AEN63885.1| cold-shock DNA-binding domain protein [Enterobacter asburiae LF7a]
Length = 79
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 63
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 64 ITNGAKGPSAANV 76
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 63
Query: 255 IMQGDKG 261
I G KG
Sbjct: 64 ITNGAKG 70
>gi|337286358|ref|YP_004625831.1| cold-shock DNA-binding domain-containing protein
[Thermodesulfatator indicus DSM 15286]
gi|335359186|gb|AEH44867.1| cold-shock DNA-binding domain protein [Thermodesulfatator indicus
DSM 15286]
Length = 68
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
V G VKWF K GYGFI+ DVFVH I+ N +KTL EG+TVEF+I QG K
Sbjct: 2 VKGKVKWFDEKKGYGFISRDDGG-DVFVHFSAIQMNG----FKTLQEGQTVEFEITQGPK 56
Query: 94 GHEAINVT 101
G +A NVT
Sbjct: 57 GEQAANVT 64
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
V G VKWF K GYGFI+ DVFVH I+ N +KTL EG+TVEF+I QG K
Sbjct: 2 VKGKVKWFDEKKGYGFISRDDGG-DVFVHFSAIQMNG----FKTLQEGQTVEFEITQGPK 56
Query: 261 GNQ 263
G Q
Sbjct: 57 GEQ 59
>gi|365969506|ref|YP_004951067.1| cold shock-like protein CspE [Enterobacter cloacae EcWSU1]
gi|365748419|gb|AEW72646.1| Cold shock-like protein CspE [Enterobacter cloacae EcWSU1]
Length = 79
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 63
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 64 ITNGAKGPSAANV 76
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 63
Query: 255 IMQGDKG 261
I G KG
Sbjct: 64 ITNGAKG 70
>gi|242074456|ref|XP_002447164.1| hypothetical protein SORBIDRAFT_06g029650 [Sorghum bicolor]
gi|241938347|gb|EES11492.1| hypothetical protein SORBIDRAFT_06g029650 [Sorghum bicolor]
Length = 215
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
+V G VKWF+V G+GFI ++ED+FVH IK + Y++L EGE VE+ + G
Sbjct: 5 RVTGTVKWFNVDKGFGFITPDDASEDLFVHQSSIKCDG----YRSLKEGEAVEYTVGSGQ 60
Query: 93 KGH-EAINVTGPDGRHVQGSQ 112
G +A++VT P G ++ G +
Sbjct: 61 DGRTKAMDVTAPGGGNLAGGE 81
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
+V G VKWF+V G+GFI ++ED+FVH IK + Y++L EGE VE+ + G
Sbjct: 5 RVTGTVKWFNVDKGFGFITPDDASEDLFVHQSSIKCDG----YRSLKEGEAVEYTVGSGQ 60
Query: 260 KG 261
G
Sbjct: 61 DG 62
>gi|410927446|ref|XP_003977157.1| PREDICTED: protein lin-28 homolog A-like [Takifugu rubripes]
Length = 340
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 36 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
GV KWF+V+ G+GF++ + DVFVH ++ +++L EGE VEF
Sbjct: 172 GVCKWFNVRMGFGFLSMTNREGLPLDEPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 227
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
+ KG E+ VTGP G H GS+ K +R++K ++
Sbjct: 228 KKSSKGLESQRVTGPGGIHCMGSERRPKGKKVQKRRSKGDR 268
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
GV KWF+V+ G+GF++ + DVFVH ++ +++L EGE VEF
Sbjct: 172 GVCKWFNVRMGFGFLSMTNREGLPLDEPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 227
Query: 256 MQGDKG 261
+ KG
Sbjct: 228 KKSSKG 233
>gi|256822338|ref|YP_003146301.1| cold-shock DNA-binding domain-containing protein [Kangiella
koreensis DSM 16069]
gi|256795877|gb|ACV26533.1| cold-shock DNA-binding domain protein [Kangiella koreensis DSM
16069]
Length = 68
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI EDVFVH + I+ + +KTLAEG+ VEFDI QG
Sbjct: 2 SKITGTVKWFNESKGFGFIEQ-EQGEDVFVHFRAIQGDG----FKTLAEGQRVEFDIEQG 56
Query: 92 DKGHEAINVT 101
KG +A NVT
Sbjct: 57 PKGAQAANVT 66
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI EDVFVH + I+ + +KTLAEG+ VEFDI QG
Sbjct: 2 SKITGTVKWFNESKGFGFIEQ-EQGEDVFVHFRAIQGDG----FKTLAEGQRVEFDIEQG 56
Query: 259 DKGNQFCFVLK 269
KG Q V K
Sbjct: 57 PKGAQAANVTK 67
>gi|293345049|ref|XP_002725925.1| PREDICTED: protein lin-28 homolog B isoform 1 [Rattus norvegicus]
gi|293356922|ref|XP_001069344.2| PREDICTED: protein lin-28 homolog B isoform 1 [Rattus norvegicus]
Length = 271
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 36 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
G KWF+V+ G+GFI+ S DVFVH ++ +++L EGE VEF
Sbjct: 30 GHCKWFNVRMGFGFISMISREGNPLDIPVDVFVHQSKLFMEG----FRSLKEGEPVEFTF 85
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRRNNRLFGVKYQ 146
+ KG E+I VTGP G GS+ +RK KA++ +R+ ++++ V+ +
Sbjct: 86 KKSPKGLESIRVTGPGGNPCLGSERRPKGKTLQKRKPKADRWRRQDLLMDQMWTVREE 143
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
G KWF+V+ G+GFI+ S DVFVH ++ +++L EGE VEF
Sbjct: 30 GHCKWFNVRMGFGFISMISREGNPLDIPVDVFVHQSKLFMEG----FRSLKEGEPVEFTF 85
Query: 256 MQGDKG 261
+ KG
Sbjct: 86 KKSPKG 91
>gi|238759184|ref|ZP_04620352.1| Cold shock-like protein cspI [Yersinia aldovae ATCC 35236]
gi|238702600|gb|EEP95149.1| Cold shock-like protein cspI [Yersinia aldovae ATCC 35236]
Length = 66
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I QG K
Sbjct: 1 MTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFSIEQGQK 56
Query: 94 GHEAINVT 101
G A+NV
Sbjct: 57 GPSAVNVV 64
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I QG K
Sbjct: 1 MTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFSIEQGQK 56
Query: 261 G 261
G
Sbjct: 57 G 57
>gi|269103742|ref|ZP_06156439.1| cold shock protein [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163640|gb|EEZ42136.1| cold shock protein [Photobacterium damselae subsp. damselae CIP
102761]
Length = 69
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI+ + DVFVH + I + +KTLAEG+ V FD+ QG
Sbjct: 2 SKATGIVKWFNEEKGFGFISQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFDVEQG 57
Query: 92 DKGHEAINVT 101
KG +A NV
Sbjct: 58 QKGPQAANVV 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI+ + DVFVH + I + +KTLAEG+ V FD+ QG
Sbjct: 2 SKATGIVKWFNEEKGFGFISQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFDVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|269954913|ref|YP_003324702.1| cold-shock DNA-binding domain-containing protein [Xylanimonas
cellulosilytica DSM 15894]
gi|269303594|gb|ACZ29144.1| cold-shock DNA-binding domain protein [Xylanimonas cellulosilytica
DSM 15894]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFIA ++DVF H I+ N Y+TL EG+ VEFD QG KG
Sbjct: 4 GTVKWFNAEKGYGFIAPEDGSQDVFAHYSAIQTNG----YRTLEEGQRVEFDTAQGPKGL 59
Query: 96 EAINV 100
+A N+
Sbjct: 60 QAENI 64
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFIA ++DVF H I+ N Y+TL EG+ VEFD QG KG
Sbjct: 4 GTVKWFNAEKGYGFIAPEDGSQDVFAHYSAIQTNG----YRTLEEGQRVEFDTAQGPKGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|386284915|ref|ZP_10062134.1| cold-shock DNA-binding domain-containing protein [Sulfurovum sp.
AR]
gi|385344318|gb|EIF51035.1| cold-shock DNA-binding domain-containing protein [Sulfurovum sp.
AR]
Length = 72
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+AT+V G VKWF+ + G+GFI + DVFVH ++I N ++ +L EG+ V F+I
Sbjct: 1 MATQVNGTVKWFNSEKGFGFIEQENGGNDVFVHYRQINSNGYDRV--SLNEGQKVTFEIG 58
Query: 90 QGDKGHEAINVTG 102
+G KG +A NVTG
Sbjct: 59 EGQKGPQAENVTG 71
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+AT+V G VKWF+ + G+GFI + DVFVH ++I N ++ +L EG+ V F+I
Sbjct: 1 MATQVNGTVKWFNSEKGFGFIEQENGGNDVFVHYRQINSNGYDRV--SLNEGQKVTFEIG 58
Query: 257 QGDKGNQ 263
+G KG Q
Sbjct: 59 EGQKGPQ 65
>gi|325261145|ref|ZP_08127883.1| conserved domain protein [Clostridium sp. D5]
gi|324032599|gb|EGB93876.1| conserved domain protein [Clostridium sp. D5]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI ++ EDVFVH I + YK+L EG+ V FDI +G++G
Sbjct: 4 GTVKWFNAQKGFGFITNDANGEDVFVHFSGIASDG----YKSLEEGQKVSFDITEGNRGP 59
Query: 96 EAINVTGP 103
+A+NV G
Sbjct: 60 QAVNVVGA 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI ++ EDVFVH I + YK+L EG+ V FDI +G++G
Sbjct: 4 GTVKWFNAQKGFGFITNDANGEDVFVHFSGIASDG----YKSLEEGQKVSFDITEGNRGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|148673097|gb|EDL05044.1| lin-28 homolog B (C. elegans), isoform CRA_b [Mus musculus]
Length = 281
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 18 SANESPKK-------EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHS 63
S E P+K EP VL G KWF+V+ G+GFI+ S DVFVH
Sbjct: 17 SKGEEPEKLPGLAEDEPQVLHGT--GHCKWFNVRMGFGFISMISREGNPLDIPVDVFVHQ 74
Query: 64 KRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++ +++L EGE VEF + KG E+I VTGP G GS+ +R
Sbjct: 75 SKLFMEG----FRSLKEGEPVEFTFKKSPKGLESIRVTGPGGSPCLGSERRPKGKTLQKR 130
Query: 124 KAKANKRKRKSRRNNRLFGVKYQ 146
K K ++ +R+ ++++ V+ +
Sbjct: 131 KPKGDRWRRQDLLMDQMWTVREE 153
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 169 QMCDSG-TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE--- 224
++C G +K E P +E EP VL G KWF+V+ G+GFI+ S
Sbjct: 10 KVCGCGASKGEEPEKLPGLAED---EPQVLHGT--GHCKWFNVRMGFGFISMISREGNPL 64
Query: 225 ----DVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
DVFVH ++ +++L EGE VEF + KG
Sbjct: 65 DIPVDVFVHQSKLFMEG----FRSLKEGEPVEFTFKKSPKG 101
>gi|74095589|emb|CAJ27355.1| strongly similar to cold shock-like protein cspE [Cronobacter
sakazakii]
Length = 79
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 63
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 64 ITNGAKGPSAANV 76
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 63
Query: 255 IMQGDKG 261
I G KG
Sbjct: 64 ITNGAKG 70
>gi|85001185|ref|XP_955311.1| cold shock protein [Theileria annulata strain Ankara]
gi|65303457|emb|CAI75835.1| cold shock protein, putative [Theileria annulata]
Length = 95
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
T++ GV KWF+ K GYGFI T + EDVFVH I + +++L E E VE +++
Sbjct: 2 TRLNGVCKWFNNKKGYGFI-TLENGEDVFVHQSEIYADG----FRSLHENEKVELEVIMD 56
Query: 92 DKGHEAINVTGPDGRHVQGSQ 112
+ +AI+VTGP+G HV G+
Sbjct: 57 NNRKKAIHVTGPNGTHVTGTN 77
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
T++ GV KWF+ K GYGFI T + EDVFVH I + +++L E E VE +++
Sbjct: 2 TRLNGVCKWFNNKKGYGFI-TLENGEDVFVHQSEIYADG----FRSLHENEKVELEVI 54
>gi|238919617|ref|YP_002933132.1| cold-shock DNA-binding domain protein [Edwardsiella ictaluri
93-146]
gi|269138905|ref|YP_003295606.1| cold shock protein [Edwardsiella tarda EIB202]
gi|294636002|ref|ZP_06714441.1| conserved domain protein [Edwardsiella tarda ATCC 23685]
gi|317492183|ref|ZP_07950613.1| cold-shock' DNA-binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|365837352|ref|ZP_09378721.1| cold shock-like protein CspE [Hafnia alvei ATCC 51873]
gi|387867578|ref|YP_005699047.1| Cold shock protein CspC [Edwardsiella tarda FL6-60]
gi|451964682|ref|ZP_21917945.1| cold shock-like protein CspC [Edwardsiella tarda NBRC 105688]
gi|238869186|gb|ACR68897.1| cold-shock DNA-binding domain protein [Edwardsiella ictaluri
93-146]
gi|267984566|gb|ACY84395.1| cold shock protein [Edwardsiella tarda EIB202]
gi|291090679|gb|EFE23240.1| conserved domain protein [Edwardsiella tarda ATCC 23685]
gi|304558891|gb|ADM41555.1| Cold shock protein CspC [Edwardsiella tarda FL6-60]
gi|316919888|gb|EFV41217.1| cold-shock' DNA-binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|364562084|gb|EHM39954.1| cold shock-like protein CspE [Hafnia alvei ATCC 51873]
gi|451316574|dbj|GAC63307.1| cold shock-like protein CspC [Edwardsiella tarda NBRC 105688]
Length = 69
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNEAKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQHVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPSAVNVT 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNEAKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQHVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|331641125|ref|ZP_08342260.1| cold shock protein [Escherichia coli H736]
gi|331645781|ref|ZP_08346884.1| cold shock protein [Escherichia coli M605]
gi|331651632|ref|ZP_08352651.1| cold shock protein [Escherichia coli M718]
gi|331672164|ref|ZP_08372956.1| cold shock protein [Escherichia coli TA280]
gi|331676282|ref|ZP_08376994.1| cold shock protein [Escherichia coli H591]
gi|417680763|ref|ZP_12330146.1| cold shock-like protein cspI [Shigella boydii 3594-74]
gi|425148476|ref|ZP_18548382.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 88.0221]
gi|425209873|ref|ZP_18605618.1| cold shock protein CspE [Escherichia coli PA4]
gi|428969691|ref|ZP_19040325.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 90.0039]
gi|428988070|ref|ZP_19057364.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 93.0056]
gi|428993887|ref|ZP_19062796.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 94.0618]
gi|429030781|ref|ZP_19096659.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0939]
gi|429042920|ref|ZP_19107925.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0107]
gi|429059718|ref|ZP_19123863.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 97.0007]
gi|444922944|ref|ZP_21242655.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 09BKT078844]
gi|444973331|ref|ZP_21290609.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1805]
gi|445016666|ref|ZP_21332712.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA8]
gi|1778540|gb|AAB40823.1| cold shock-like protein [Escherichia coli]
gi|331037923|gb|EGI10143.1| cold shock protein [Escherichia coli H736]
gi|331044533|gb|EGI16660.1| cold shock protein [Escherichia coli M605]
gi|331049910|gb|EGI21968.1| cold shock protein [Escherichia coli M718]
gi|331070631|gb|EGI41994.1| cold shock protein [Escherichia coli TA280]
gi|331076340|gb|EGI47622.1| cold shock protein [Escherichia coli H591]
gi|332097718|gb|EGJ02692.1| cold shock-like protein cspI [Shigella boydii 3594-74]
gi|408141222|gb|EKH70696.1| cold shock protein CspE [Escherichia coli PA4]
gi|408610075|gb|EKK83450.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 88.0221]
gi|427233838|gb|EKW01563.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 90.0039]
gi|427251282|gb|EKW17868.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 93.0056]
gi|427253936|gb|EKW20318.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 94.0618]
gi|427293561|gb|EKW56811.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0939]
gi|427310428|gb|EKW72678.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0107]
gi|427322051|gb|EKW83701.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 97.0007]
gi|444550421|gb|ELV28520.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 09BKT078844]
gi|444607891|gb|ELV82447.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1805]
gi|444636863|gb|ELW10247.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA8]
Length = 79
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 63
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 64 ITNGAKGPSAANV 76
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 63
Query: 255 IMQGDKG 261
I G KG
Sbjct: 64 ITNGAKG 70
>gi|383936266|ref|ZP_09989694.1| cold shock protein [Rheinheimera nanhaiensis E407-8]
gi|383702646|dbj|GAB59785.1| cold shock protein [Rheinheimera nanhaiensis E407-8]
Length = 69
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
KV GVVKWF+ G+GFI + D FVH + I+ YKTL EG+ V F+I QG
Sbjct: 3 KVTGVVKWFNADKGFGFITQDNGGADAFVHFRAIQTEG----YKTLNEGQRVSFEIEQGQ 58
Query: 93 KGHEAINVT 101
KG +A NVT
Sbjct: 59 KGPQAANVT 67
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
KV GVVKWF+ G+GFI + D FVH + I+ YKTL EG+ V F+I QG
Sbjct: 3 KVTGVVKWFNADKGFGFITQDNGGADAFVHFRAIQTEG----YKTLNEGQRVSFEIEQGQ 58
Query: 260 KGNQ 263
KG Q
Sbjct: 59 KGPQ 62
>gi|307721642|ref|YP_003892782.1| cold-shock DNA-binding protein family [Sulfurimonas autotrophica
DSM 16294]
gi|306979735|gb|ADN09770.1| cold-shock DNA-binding protein family [Sulfurimonas autotrophica
DSM 16294]
Length = 72
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+AT G VKWF+ G+GFI +DVFVH ++I N ++ +L EG+ V F+I
Sbjct: 1 MATLQNGTVKWFNSDKGFGFIEVEDGGKDVFVHYRQINDNGHSRV--SLDEGQKVTFEIG 58
Query: 90 QGDKGHEAINVTG 102
QGDKG +A NVTG
Sbjct: 59 QGDKGPQAENVTG 71
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+AT G VKWF+ G+GFI +DVFVH ++I N ++ +L EG+ V F+I
Sbjct: 1 MATLQNGTVKWFNSDKGFGFIEVEDGGKDVFVHYRQINDNGHSRV--SLDEGQKVTFEIG 58
Query: 257 QGDKGNQ 263
QGDKG Q
Sbjct: 59 QGDKGPQ 65
>gi|253990644|ref|YP_003042000.1| cold shock-like protein cspe [Photorhabdus asymbiotica]
gi|253782094|emb|CAQ85258.1| cold shock-like protein cspe [Photorhabdus asymbiotica]
Length = 79
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VCLMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQKVEFE 63
Query: 88 IMQGDKGHEAINVT 101
I G KG A+NV
Sbjct: 64 ITDGAKGPSAVNVV 77
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 8 VCLMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQKVEFE 63
Query: 255 IMQGDKG 261
I G KG
Sbjct: 64 ITDGAKG 70
>gi|240948086|ref|ZP_04752496.1| cold shock-like protein CspC [Actinobacillus minor NM305]
gi|257465091|ref|ZP_05629462.1| cold shock-like protein CspC [Actinobacillus minor 202]
gi|240297566|gb|EER48058.1| cold shock-like protein CspC [Actinobacillus minor NM305]
gi|257450751|gb|EEV24794.1| cold shock-like protein CspC [Actinobacillus minor 202]
Length = 70
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+KV G VKWF+ G+GFIA ED+FVH I+ N Y+TL EG VEF++
Sbjct: 2 SKVTGTVKWFNATKGFGFIAPDQGGEDIFVHFSAIESNGG---YRTLEEGAKVEFEVQAS 58
Query: 92 DKGHEAINV 100
D+G A NV
Sbjct: 59 DRGASAANV 67
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+KV G VKWF+ G+GFIA ED+FVH I+ N Y+TL EG VEF++
Sbjct: 2 SKVTGTVKWFNATKGFGFIAPDQGGEDIFVHFSAIESNGG---YRTLEEGAKVEFEVQAS 58
Query: 259 DKG 261
D+G
Sbjct: 59 DRG 61
>gi|325263633|ref|ZP_08130367.1| conserved domain protein [Clostridium sp. D5]
gi|324031342|gb|EGB92623.1| conserved domain protein [Clostridium sp. D5]
Length = 67
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI + EDVFVH + + +KTL +G+ V FDI QG++G
Sbjct: 4 GTVKWFNAQKGFGFITNAADGEDVFVHFSGLAMDG----FKTLEDGQNVTFDITQGNRGL 59
Query: 96 EAINV 100
+A+NV
Sbjct: 60 QAVNV 64
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI + EDVFVH + + +KTL +G+ V FDI QG++G
Sbjct: 4 GTVKWFNAQKGFGFITNAADGEDVFVHFSGLAMDG----FKTLEDGQNVTFDITQGNRGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|452990256|emb|CCQ98573.1| cold-shock protein, molecular chaperone,RNA-helicase co-factor
[Clostridium ultunense Esp]
Length = 66
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
V G VKWF+ GYGFI+T EDVFVH I+ + +KTL EG+ VEF+I+QG+K
Sbjct: 2 VKGTVKWFNATKGYGFISTEEG-EDVFVHYSAIESDG----FKTLEEGQNVEFEIVQGEK 56
Query: 94 GHEAINV 100
G +A NV
Sbjct: 57 GPQATNV 63
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
V G VKWF+ GYGFI+T EDVFVH I+ + +KTL EG+ VEF+I+QG+K
Sbjct: 2 VKGTVKWFNATKGYGFISTEEG-EDVFVHYSAIESDG----FKTLEEGQNVEFEIVQGEK 56
Query: 261 GNQFCFVLK 269
G Q V+K
Sbjct: 57 GPQATNVIK 65
>gi|375108626|ref|ZP_09754880.1| cold-shock DNA-binding domain-containing protein [Alishewanella
jeotgali KCTC 22429]
gi|374570812|gb|EHR41941.1| cold-shock DNA-binding domain-containing protein [Alishewanella
jeotgali KCTC 22429]
Length = 70
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
KV GVVKWF+ G+GFI + D FVH + I+ YKTL EG+ V F+I QG
Sbjct: 3 KVTGVVKWFNADKGFGFITQDNGGADAFVHFRAIQTEG----YKTLNEGQKVAFEIEQGQ 58
Query: 93 KGHEAINVT 101
KG +A NVT
Sbjct: 59 KGPQAANVT 67
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
KV GVVKWF+ G+GFI + D FVH + I+ YKTL EG+ V F+I QG
Sbjct: 3 KVTGVVKWFNADKGFGFITQDNGGADAFVHFRAIQTEG----YKTLNEGQKVAFEIEQGQ 58
Query: 260 KGNQ 263
KG Q
Sbjct: 59 KGPQ 62
>gi|284007335|emb|CBA72699.1| cold shock protein CspE [Arsenophonus nasoniae]
Length = 88
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
TK+ G VKWF+ G+GFI +DVFVH I N +KTL G+ VEFDI +G
Sbjct: 21 TKITGTVKWFNETKGFGFITPEGGGKDVFVHYTAIDVNG----FKTLTVGQKVEFDIQEG 76
Query: 92 DKGHEAINVT 101
KG A NVT
Sbjct: 77 SKGSAANNVT 86
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
TK+ G VKWF+ G+GFI +DVFVH I N +KTL G+ VEFDI +G
Sbjct: 21 TKITGTVKWFNETKGFGFITPEGGGKDVFVHYTAIDVNG----FKTLTVGQKVEFDIQEG 76
Query: 259 DKGN 262
KG+
Sbjct: 77 SKGS 80
>gi|78042603|ref|NP_001026942.1| protein lin-28 homolog B [Mus musculus]
gi|71724928|gb|AAZ38894.1| LIN28B [Mus musculus]
gi|111598825|gb|AAH89037.1| Lin-28 homolog B (C. elegans) [Mus musculus]
Length = 271
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 18 SANESPKK-------EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHS 63
S E P+K EP VL G KWF+V+ G+GFI+ S DVFVH
Sbjct: 7 SKGEEPEKLPGLAEDEPQVLHGT--GHCKWFNVRMGFGFISMISREGNPLDIPVDVFVHQ 64
Query: 64 KRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
++ +++L EGE VEF + KG E+I VTGP G GS+ +R
Sbjct: 65 SKLFMEG----FRSLKEGEPVEFTFKKSPKGLESIRVTGPGGSPCLGSERRPKGKTLQKR 120
Query: 124 KAKANKRKRKSRRNNRLFGVKYQ 146
K K ++ +R+ ++++ V+ +
Sbjct: 121 KPKGDRWRRQDLLMDQMWTVREE 143
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 170 MCDSG-TKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE---- 224
M + G +K E P +E EP VL G KWF+V+ G+GFI+ S
Sbjct: 1 MAEGGASKGEEPEKLPGLAED---EPQVLHGT--GHCKWFNVRMGFGFISMISREGNPLD 55
Query: 225 ---DVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
DVFVH ++ +++L EGE VEF + KG
Sbjct: 56 IPVDVFVHQSKLFMEG----FRSLKEGEPVEFTFKKSPKG 91
>gi|253989236|ref|YP_003040592.1| cold shock protein [Photorhabdus asymbiotica]
gi|253780686|emb|CAQ83848.1| cold shock protein [Photorhabdus asymbiotica]
Length = 69
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I+ + +KTLAEG+ VEF+I G
Sbjct: 3 KITGTVKWFNESKGFGFITPADGSKDVFVHFSAIQSDG----FKTLAEGQKVEFEIQDGQ 58
Query: 93 KGHEAINVT 101
KG A NVT
Sbjct: 59 KGPSAANVT 67
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I+ + +KTLAEG+ VEF+I G
Sbjct: 3 KITGTVKWFNESKGFGFITPADGSKDVFVHFSAIQSDG----FKTLAEGQKVEFEIQDGQ 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|400405353|ref|YP_006588212.1| cold shock protein [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400363716|gb|AFP84784.1| cold shock protein [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 69
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG++VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLTEGQSVEFEIQDGQ 58
Query: 93 KGHEAINVT 101
KG A+NVT
Sbjct: 59 KGPSAVNVT 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG++VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLTEGQSVEFEIQDGQ 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|383762907|ref|YP_005441889.1| putative cold shock protein [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381383175|dbj|BAL99991.1| putative cold shock protein [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 70
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+AT+ G VKWF+ + GYGFI S +DVFVH I N ++TLAEG+ VEF I
Sbjct: 1 MATREKGTVKWFNDQKGYGFITPDSGRKDVFVHQTAIMSNG----FRTLAEGDKVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A NV
Sbjct: 57 NGPKGPSAANV 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+AT+ G VKWF+ + GYGFI S +DVFVH I N ++TLAEG+ VEF I
Sbjct: 1 MATREKGTVKWFNDQKGYGFITPDSGRKDVFVHQTAIMSNG----FRTLAEGDKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGPKG 61
>gi|452995448|emb|CCQ92894.1| cold-shock protein, molecular chaperone,RNA-helicase co-factor
[Clostridium ultunense Esp]
Length = 66
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G VKWF+ + GYGFI T DVFVH I+ + YKTL EG++VEFDI+QG++
Sbjct: 1 MVGKVKWFNAEKGYGFIQTEEGG-DVFVHFSAIQGDG----YKTLTEGQSVEFDIVQGNR 55
Query: 94 GHEAINVT 101
G +A NV
Sbjct: 56 GPQAANVV 63
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G VKWF+ + GYGFI T DVFVH I+ + YKTL EG++VEFDI+QG++
Sbjct: 1 MVGKVKWFNAEKGYGFIQTEEGG-DVFVHFSAIQGDG----YKTLTEGQSVEFDIVQGNR 55
Query: 261 GNQFCFVLK 269
G Q V+K
Sbjct: 56 GPQAANVVK 64
>gi|333895268|ref|YP_004469143.1| putative cold shock-like protein cspG [Alteromonas sp. SN2]
gi|332995286|gb|AEF05341.1| putative cold shock-like protein cspG [Alteromonas sp. SN2]
Length = 69
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+KV G VKWF+ GYGF+ + +DVFVH + I + YKTL EG+ VEF++ +G
Sbjct: 2 SKVTGTVKWFNADKGYGFLTQDNGGKDVFVHFRAIVSDG----YKTLPEGQRVEFEVEEG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGLQAANV 66
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+KV G VKWF+ GYGF+ + +DVFVH + I + YKTL EG+ VEF++ +G
Sbjct: 2 SKVTGTVKWFNADKGYGFLTQDNGGKDVFVHFRAIVSDG----YKTLPEGQRVEFEVEEG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGLQ 62
>gi|297626180|ref|YP_003687943.1| Cold shock-like protein CspA [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921945|emb|CBL56505.1| Cold shock-like protein CspA [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 68
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFIA S++DVFVH I +++L EG+ VEFDI QG KG
Sbjct: 4 GTVKWFNAEKGYGFIAVDGSSDDVFVHYSAIDSTG----FRSLDEGQKVEFDIAQGPKGQ 59
Query: 96 EAINV 100
+A +V
Sbjct: 60 QAEHV 64
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFIA S++DVFVH I +++L EG+ VEFDI QG KG
Sbjct: 4 GTVKWFNAEKGYGFIAVDGSSDDVFVHYSAIDSTG----FRSLDEGQKVEFDIAQGPKGQ 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|193875878|gb|ACF24575.1| glycine-rich nucleic acid binding protein [Gymnochlora stellata]
Length = 290
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
L + G KWF+ GYGFI +D+FVH IK +++LAEGE VEFD+
Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVG----FRSLAEGEQVEFDVE 75
Query: 90 QGDKGH-EAINVTGPDGRHVQGSQF 113
G +A NVTGP+G +V+G+ F
Sbjct: 76 VDATGRKKARNVTGPNGAYVRGAPF 100
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
L + G KWF+ GYGFI +D+FVH IK +++LAEGE VEFD+
Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVG----FRSLAEGEQVEFDV 74
>gi|157146760|ref|YP_001454079.1| cold shock protein CspE [Citrobacter koseri ATCC BAA-895]
gi|157083965|gb|ABV13643.1| hypothetical protein CKO_02534 [Citrobacter koseri ATCC BAA-895]
Length = 100
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 29 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 84
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 85 ITNGAKGPSAANV 97
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 29 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 84
Query: 255 IMQGDKG 261
I G KG
Sbjct: 85 ITNGAKG 91
>gi|21322752|dbj|BAB78536.2| cold shock protein-1 [Triticum aestivum]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ +V G VKWF+V G+GFI+ +ED+FVH IK + Y++L E +TVEF+++
Sbjct: 1 MGERVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDTVEFEVI 56
Query: 90 QGDKGH-EAINVTGPDG 105
GD G +A +VT P G
Sbjct: 57 TGDDGRTKASDVTAPGG 73
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ +V G VKWF+V G+GFI+ +ED+FVH IK + Y++L E +TVEF+++
Sbjct: 1 MGERVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDTVEFEVI 56
Query: 257 QGDKG 261
GD G
Sbjct: 57 TGDDG 61
>gi|308049339|ref|YP_003912905.1| cold-shock DNA-binding protein family [Ferrimonas balearica DSM
9799]
gi|307631529|gb|ADN75831.1| cold-shock DNA-binding protein family [Ferrimonas balearica DSM
9799]
Length = 69
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G VKWF+ G+GFI + DVFVH + I+ + +KTLAEG+ V FDI QG
Sbjct: 2 SKATGTVKWFNEDKGFGFITQDNGGADVFVHFRAIQGDG----FKTLAEGQQVSFDIEQG 57
Query: 92 DKGHEAINVT 101
KG +A NVT
Sbjct: 58 PKGPQAANVT 67
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G VKWF+ G+GFI + DVFVH + I+ + +KTLAEG+ V FDI QG
Sbjct: 2 SKATGTVKWFNEDKGFGFITQDNGGADVFVHFRAIQGDG----FKTLAEGQQVSFDIEQG 57
Query: 259 DKGNQFCFVLK 269
KG Q V K
Sbjct: 58 PKGPQAANVTK 68
>gi|260598298|ref|YP_003210869.1| Cold shock-like protein cspC [Cronobacter turicensis z3032]
gi|260217475|emb|CBA31616.1| Cold shock-like protein cspC [Cronobacter turicensis z3032]
Length = 106
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 85
E + K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VE
Sbjct: 33 EGICEMAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVE 88
Query: 86 FDIMQGDKGHEAINVT 101
F+I G KG A+NV
Sbjct: 89 FEIQDGQKGPAAVNVV 104
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVE 252
E + K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VE
Sbjct: 33 EGICEMAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVE 88
Query: 253 FDIMQGDKG 261
F+I G KG
Sbjct: 89 FEIQDGQKG 97
>gi|242239550|ref|YP_002987731.1| cold-shock DNA-binding domain-containing protein [Dickeya dadantii
Ech703]
gi|242131607|gb|ACS85909.1| cold-shock DNA-binding domain protein [Dickeya dadantii Ech703]
Length = 70
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI + ++DVFVH I+ ++ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPDNGSKDVFVHFSAIQSDD----YKTLYEGQKVEFVIQ 56
Query: 90 QGDKGHEAINVT 101
QG KG A NVT
Sbjct: 57 QGQKGPAAGNVT 68
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI + ++DVFVH I+ ++ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPDNGSKDVFVHFSAIQSDD----YKTLYEGQKVEFVIQ 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGQKG 61
>gi|374314184|ref|YP_005060613.1| RNA chaperone, transcription antiterminator [Serratia symbiotica
str. 'Cinara cedri']
gi|363988410|gb|AEW44601.1| RNA chaperone, transcription antiterminator [Serratia symbiotica
str. 'Cinara cedri']
Length = 95
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 24 ILKMAKIKGQVKWFNESKGFGFITPNDGSKDVFVHFSAIQGNG----FKTLAEGQNVEFE 79
Query: 88 IMQGDKGHEAINV 100
I G KG AINV
Sbjct: 80 IQDGQKGPSAINV 92
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 24 ILKMAKIKGQVKWFNESKGFGFITPNDGSKDVFVHFSAIQGNG----FKTLAEGQNVEFE 79
Query: 255 IMQGDKG 261
I G KG
Sbjct: 80 IQDGQKG 86
>gi|291085708|ref|ZP_06353810.2| putative cold shock protein [Citrobacter youngae ATCC 29220]
gi|291070213|gb|EFE08322.1| putative cold shock protein [Citrobacter youngae ATCC 29220]
Length = 100
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 29 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 84
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 85 ITNGAKGPSAANV 97
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 29 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 84
Query: 255 IMQGDKG 261
I G KG
Sbjct: 85 ITNGAKG 91
>gi|255073219|ref|XP_002500284.1| cold-shock DNA binding protein [Micromonas sp. RCC299]
gi|226515546|gb|ACO61542.1| cold-shock DNA binding protein [Micromonas sp. RCC299]
Length = 122
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ KV G VKWF+ + G+GFI ++++FVH I +++L E E VEF I
Sbjct: 1 MTGKVTGKVKWFNTQKGFGFITPDDGSDEIFVHQTAIHSEG----FRSLREDEPVEFVIE 56
Query: 90 QGDKGH-EAINVTGPDGRHVQGS 111
+ D G +AI VTGPDG VQG+
Sbjct: 57 KSDDGRTKAIEVTGPDGATVQGA 79
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ KV G VKWF+ + G+GFI ++++FVH I +++L E E VEF I
Sbjct: 1 MTGKVTGKVKWFNTQKGFGFITPDDGSDEIFVHQTAIHSEG----FRSLREDEPVEFVIE 56
Query: 257 QGDKG 261
+ D G
Sbjct: 57 KSDDG 61
>gi|153950481|ref|YP_001399368.1| cold shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis IP 31758]
gi|152961976|gb|ABS49437.1| cold shock DNA-binding domain protein [Yersinia pseudotuberculosis
IP 31758]
Length = 70
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPSAVNV 67
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|387890024|ref|YP_006320322.1| cold shock-like protein CspE [Escherichia blattae DSM 4481]
gi|386924857|gb|AFJ47811.1| cold shock-like protein CspE [Escherichia blattae DSM 4481]
Length = 111
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 40 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 95
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 96 ITNGAKGPSAANV 108
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 40 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 95
Query: 255 IMQGDKG 261
I G KG
Sbjct: 96 ITNGAKG 102
>gi|220933692|ref|YP_002512591.1| cold-shock DNA-binding domain-containing protein [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219995002|gb|ACL71604.1| cold-shock DNA-binding domain protein [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 67
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G+VKWF+ G+GFIA DVFVH I+ +KTLAEG+ V F + QG KG
Sbjct: 3 TGIVKWFNESKGFGFIAPEEGGADVFVHYSAIQAEG----FKTLAEGQRVSFQVQQGPKG 58
Query: 95 HEAINVT 101
+A+NVT
Sbjct: 59 LQAVNVT 65
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G+VKWF+ G+GFIA DVFVH I+ +KTLAEG+ V F + QG KG
Sbjct: 3 TGIVKWFNESKGFGFIAPEEGGADVFVHYSAIQAEG----FKTLAEGQRVSFQVQQGPKG 58
Query: 262 NQ 263
Q
Sbjct: 59 LQ 60
>gi|71892224|ref|YP_277957.1| cold shock-like protein CspC [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|440510020|ref|YP_007347456.1| cold shock-like protein CspC [Candidatus Blochmannia chromaiodes
str. 640]
gi|71796330|gb|AAZ41081.1| cold shock-like protein [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|440454233|gb|AGC03725.1| cold shock-like protein CspC [Candidatus Blochmannia chromaiodes
str. 640]
Length = 69
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL+EG++VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPSDGSKDVFVHFSAIQGNG----FKTLSEGQSVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 HKGPSAVNVT 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL+EG++VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPSDGSKDVFVHFSAIQGNG----FKTLSEGQSVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 HKG 60
>gi|237730609|ref|ZP_04561090.1| cold shock protein CspE [Citrobacter sp. 30_2]
gi|226906148|gb|EEH92066.1| cold shock protein CspE [Citrobacter sp. 30_2]
Length = 100
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 29 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 84
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 85 ITNGAKGPSAANV 97
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 29 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 84
Query: 255 IMQGDKG 261
I G KG
Sbjct: 85 ITNGAKG 91
>gi|110804727|ref|YP_688247.1| cold shock protein CspE [Shigella flexneri 5 str. 8401]
gi|384542254|ref|YP_005726316.1| Cold shock protein [Shigella flexneri 2002017]
gi|424837194|ref|ZP_18261831.1| cold shock protein CspE [Shigella flexneri 5a str. M90T]
gi|110614275|gb|ABF02942.1| cold shock protein [Shigella flexneri 5 str. 8401]
gi|281600039|gb|ADA73023.1| Cold shock protein [Shigella flexneri 2002017]
gi|383466246|gb|EID61267.1| cold shock protein CspE [Shigella flexneri 5a str. M90T]
Length = 97
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 81
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 82 ITNGAKGPSAANV 94
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 81
Query: 255 IMQGDKG 261
I G KG
Sbjct: 82 ITNGAKG 88
>gi|22124143|ref|NP_667566.1| cold shock-like protein [Yersinia pestis KIM10+]
gi|108809648|ref|YP_653564.1| major cold shock protein Cspa1 [Yersinia pestis Antiqua]
gi|108813686|ref|YP_649453.1| major cold shock protein Cspa1 [Yersinia pestis Nepal516]
gi|21956898|gb|AAM83817.1|AE013622_6 cold shock-like protein [Yersinia pestis KIM10+]
gi|108777334|gb|ABG19853.1| cold-shock DNA-binding protein family [Yersinia pestis Nepal516]
gi|108781561|gb|ABG15619.1| cold-shock DNA-binding protein family [Yersinia pestis Antiqua]
Length = 102
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
+ ++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF
Sbjct: 31 ISMSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFS 86
Query: 88 IMQGDKGHEAINV 100
I G KG A+NV
Sbjct: 87 IENGAKGPSAVNV 99
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
+ ++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF
Sbjct: 31 ISMSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFS 86
Query: 255 IMQGDKG 261
I G KG
Sbjct: 87 IENGAKG 93
>gi|22124144|ref|NP_667567.1| cold shock-like protein [Yersinia pestis KIM10+]
gi|45443633|ref|NP_995172.1| cold shock-like protein [Yersinia pestis biovar Microtus str.
91001]
gi|21956899|gb|AAM83818.1|AE013622_7 cold shock-like protein [Yersinia pestis KIM10+]
gi|45438503|gb|AAS64049.1| cold shock-like protein [Yersinia pestis biovar Microtus str.
91001]
Length = 95
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
+ ++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF
Sbjct: 24 ISMSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFS 79
Query: 88 IMQGDKGHEAINV 100
I G KG A+NV
Sbjct: 80 IENGAKGPAAVNV 92
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
+ ++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF
Sbjct: 24 ISMSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFS 79
Query: 255 IMQGDKG 261
I G KG
Sbjct: 80 IENGAKG 86
>gi|238893691|ref|YP_002918425.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|424934481|ref|ZP_18352853.1| Cold shock protein [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|238546007|dbj|BAH62358.1| cold shock protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|407808668|gb|EKF79919.1| Cold shock protein [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
Length = 97
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 81
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 82 ITNGAKGPSAANV 94
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 81
Query: 255 IMQGDKG 261
I G KG
Sbjct: 82 ITNGAKG 88
>gi|260597049|ref|YP_003209620.1| cold shock protein CspE [Cronobacter turicensis z3032]
gi|260216226|emb|CBA29122.1| Cold shock-like protein cspE [Cronobacter turicensis z3032]
Length = 97
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 81
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 82 ITNGAKGPSAANV 94
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 81
Query: 255 IMQGDKG 261
I G KG
Sbjct: 82 ITNGAKG 88
>gi|51597876|ref|YP_072067.1| cold-shock protein CspA [Yersinia pseudotuberculosis IP 32953]
gi|51597877|ref|YP_072068.1| cold-shock protein CspA [Yersinia pseudotuberculosis IP 32953]
gi|153949918|ref|YP_001399369.1| cold shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis IP 31758]
gi|170022694|ref|YP_001719199.1| cold-shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis YPIII]
gi|186897072|ref|YP_001874184.1| cold-shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis PB1/+]
gi|186897073|ref|YP_001874185.1| cold-shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis PB1/+]
gi|51591158|emb|CAH22823.1| major cold shock protein Cspa1 [Yersinia pseudotuberculosis IP
32953]
gi|51591159|emb|CAH22824.1| major cold shock protein Cspa1 [Yersinia pseudotuberculosis IP
32953]
gi|152961413|gb|ABS48874.1| cold shock DNA-binding domain protein [Yersinia pseudotuberculosis
IP 31758]
gi|169749228|gb|ACA66746.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
YPIII]
gi|186700098|gb|ACC90727.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
PB1/+]
gi|186700099|gb|ACC90728.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
PB1/+]
Length = 70
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPSAVNV 67
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|91209672|ref|YP_539658.1| cold shock protein CspE [Escherichia coli UTI89]
gi|237707404|ref|ZP_04537885.1| cold shock protein E [Escherichia sp. 3_2_53FAA]
gi|332281760|ref|ZP_08394173.1| cold shock protein E [Shigella sp. D9]
gi|26107003|gb|AAN79187.1|AE016757_91 Cold shock-like protein cspE [Escherichia coli CFT073]
gi|91071246|gb|ABE06127.1| cold shock-like protein CspE [Escherichia coli UTI89]
gi|226898614|gb|EEH84873.1| cold shock protein E [Escherichia sp. 3_2_53FAA]
gi|332104112|gb|EGJ07458.1| cold shock protein E [Shigella sp. D9]
Length = 97
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 81
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 82 ITNGAKGPSAANV 94
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFE 81
Query: 255 IMQGDKG 261
I G KG
Sbjct: 82 ITNGAKG 88
>gi|359766304|ref|ZP_09270122.1| putative cold shock protein [Gordonia polyisoprenivorans NBRC
16320]
gi|378716832|ref|YP_005281721.1| cold-shock protein [Gordonia polyisoprenivorans VH2]
gi|359316352|dbj|GAB22955.1| putative cold shock protein [Gordonia polyisoprenivorans NBRC
16320]
gi|375751535|gb|AFA72355.1| cold-shock protein [Gordonia polyisoprenivorans VH2]
Length = 67
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFIA EDVFVH I N Y+TL E + VEFD+ QG KG
Sbjct: 4 GTVKWFNGEKGFGFIAPDEQGEDVFVHFSAITGNG----YRTLEEAQRVEFDVEQGAKGL 59
Query: 96 EAINVTG 102
+A NV+
Sbjct: 60 QATNVSA 66
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFIA EDVFVH I N Y+TL E + VEFD+ QG KG
Sbjct: 4 GTVKWFNGEKGFGFIAPDEQGEDVFVHFSAITGNG----YRTLEEAQRVEFDVEQGAKGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|311107315|ref|YP_003980168.1| cold shock-like protein CspG [Achromobacter xylosoxidans A8]
gi|310762004|gb|ADP17453.1| cold shock-like protein CspG [Achromobacter xylosoxidans A8]
Length = 94
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V F+I+QG
Sbjct: 28 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVAFEIIQGP 83
Query: 93 KGHEAINVT 101
KG +A+N+T
Sbjct: 84 KGKQALNIT 92
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 158 MPFFMILFC-CLQMCDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGF 216
MPF I F ++M D+ T NP K G VKWF+ G+GF
Sbjct: 1 MPFVNIRFNEAVRMSDT-TATAVQGDNP---------------KSTGTVKWFNDAKGFGF 44
Query: 217 IATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQ 263
I ED+F H I+ N +KTL EG+ V F+I+QG KG Q
Sbjct: 45 ITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVAFEIIQGPKGKQ 87
>gi|332142943|ref|YP_004428681.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Deep ecotype']
gi|332143012|ref|YP_004428750.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Deep ecotype']
gi|406598318|ref|YP_006749448.1| cold shock-like protein cspG [Alteromonas macleodii ATCC 27126]
gi|407685311|ref|YP_006800485.1| cold shock-like protein cspG [Alteromonas macleodii str. 'English
Channel 673']
gi|407689247|ref|YP_006804420.1| cold shock-like protein cspG [Alteromonas macleodii str. 'Balearic
Sea AD45']
gi|407701549|ref|YP_006826336.1| cold shock-like protein cspG [Alteromonas macleodii str. 'Black Sea
11']
gi|410863222|ref|YP_006978456.1| cold shock-like protein cspG [Alteromonas macleodii AltDE1]
gi|327552965|gb|AEA99683.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Deep ecotype']
gi|327553034|gb|AEA99752.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Deep ecotype']
gi|406375639|gb|AFS38894.1| putative cold shock-like protein cspG [Alteromonas macleodii ATCC
27126]
gi|407246922|gb|AFT76108.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'English Channel 673']
gi|407250696|gb|AFT79881.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Black Sea 11']
gi|407292627|gb|AFT96939.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|410820484|gb|AFV87101.1| putative cold shock-like protein cspG [Alteromonas macleodii
AltDE1]
Length = 69
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+KV G VKWF+ GYGF+ + +DVFVH + I + YKTL EG+ VEF++ +G
Sbjct: 2 SKVTGTVKWFNADKGYGFLTQDNGGKDVFVHFRAIISDG----YKTLPEGQRVEFEVEEG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGLQAANV 66
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+KV G VKWF+ GYGF+ + +DVFVH + I + YKTL EG+ VEF++ +G
Sbjct: 2 SKVTGTVKWFNADKGYGFLTQDNGGKDVFVHFRAIISDG----YKTLPEGQRVEFEVEEG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGLQ 62
>gi|300722953|ref|YP_003712249.1| Qin prophage; cold shock protein [Xenorhabdus nematophila ATCC
19061]
gi|297629466|emb|CBJ90067.1| Qin prophage; cold shock protein [Xenorhabdus nematophila ATCC
19061]
Length = 71
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ N+ Y+TL+EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPSDGSKDVFVHFSAIQSND----YRTLSEGQKVEFTIE 56
Query: 90 QGDKGHEAINV 100
G KG A NV
Sbjct: 57 NGAKGPAAANV 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ N+ Y+TL+EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPSDGSKDVFVHFSAIQSND----YRTLSEGQKVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|262273606|ref|ZP_06051420.1| cold shock protein CspA [Grimontia hollisae CIP 101886]
gi|262273607|ref|ZP_06051421.1| cold shock protein CspD [Grimontia hollisae CIP 101886]
gi|262222584|gb|EEY73895.1| cold shock protein CspA [Grimontia hollisae CIP 101886]
gi|262222585|gb|EEY73896.1| cold shock protein CspD [Grimontia hollisae CIP 101886]
Length = 70
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V FD+
Sbjct: 1 MSNKTTGLVKWFNEEKGFGFITQDNGGADVFVHFRAIASDG----FKTLAEGQKVSFDVE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A NV
Sbjct: 57 QGQKGPQAANVVA 69
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V FD+
Sbjct: 1 MSNKTTGLVKWFNEEKGFGFITQDNGGADVFVHFRAIASDG----FKTLAEGQKVSFDVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|47214418|emb|CAG00259.1| unnamed protein product [Tetraodon nigroviridis]
Length = 179
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 15/102 (14%)
Query: 36 GVVKWFSVKSGYGFIATPS-------SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
GV KWF+++ G+GFI+ S N DVFVH ++ +++L EGE +EF
Sbjct: 6 GVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEG----FRSLREGEALEFSF 61
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYN-RRKAKANK 129
+ KG EA+ V+GP G GS+ +PK + +R++KA++
Sbjct: 62 KKSSKGLEAVRVSGPGGAPCLGSK---RRPKSSLKRRSKADR 100
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPS-------SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
GV KWF+++ G+GFI+ S N DVFVH ++ +++L EGE +EF
Sbjct: 6 GVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEG----FRSLREGEALEFSF 61
Query: 256 MQGDKG 261
+ KG
Sbjct: 62 KKSSKG 67
>gi|451344351|ref|ZP_21913411.1| cold shock-like protein CspD [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449337065|gb|EMD16233.1| cold shock-like protein CspD [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 68
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF GYGFI ++D+FVH I + ++TL EG+TV FDI++GD+G
Sbjct: 3 TGKVKWFKADKGYGFITVEDQSKDIFVHYSAINSDG----FRTLEEGQTVSFDIVEGDRG 58
Query: 95 HEAINVT 101
+A NVT
Sbjct: 59 PQASNVT 65
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF GYGFI ++D+FVH I + ++TL EG+TV FDI++GD+G
Sbjct: 3 TGKVKWFKADKGYGFITVEDQSKDIFVHYSAINSDG----FRTLEEGQTVSFDIVEGDRG 58
Query: 262 NQ 263
Q
Sbjct: 59 PQ 60
>gi|375257267|ref|YP_005016437.1| 'cold-shock' DNA-binding domain protein [Klebsiella oxytoca KCTC
1686]
gi|365906745|gb|AEX02198.1| 'cold-shock' DNA-binding domain protein [Klebsiella oxytoca KCTC
1686]
Length = 72
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ +++ G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I
Sbjct: 1 MTSRIMGLVKWFNEDKGFGFISPLDGSKDIFVHLSALDGDN----FKTLFEGQKVEFAIH 56
Query: 90 QGDKGHEAINVT 101
+GDKG A NVT
Sbjct: 57 RGDKGPAAANVT 68
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ +++ G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I
Sbjct: 1 MTSRIMGLVKWFNEDKGFGFISPLDGSKDIFVHLSALDGDN----FKTLFEGQKVEFAIH 56
Query: 257 QGDKG 261
+GDKG
Sbjct: 57 RGDKG 61
>gi|290510381|ref|ZP_06549751.1| cold shock protein (beta-ribbon, CspA family) [Klebsiella sp.
1_1_55]
gi|289777097|gb|EFD85095.1| cold shock protein (beta-ribbon, CspA family) [Klebsiella sp.
1_1_55]
Length = 97
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 81
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 82 ITNGAKGPSAANV 94
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V+L +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+
Sbjct: 26 VILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFE 81
Query: 255 IMQGDKG 261
I G KG
Sbjct: 82 ITNGAKG 88
>gi|300722306|ref|YP_003711591.1| RNA chaperone, transcription antiterminator, affects expression of
rpoS and uspA [Xenorhabdus nematophila ATCC 19061]
gi|297628808|emb|CBJ89386.1| RNA chaperone, transcription antiterminator, affects expression of
rpoS and uspA [Xenorhabdus nematophila ATCC 19061]
Length = 69
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH IK + +KTLAEG+ VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIKSSG----FKTLAEGQKVEFEITEG 57
Query: 92 DKGHEAINVT 101
DKG A NV
Sbjct: 58 DKGPSAANVV 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH IK + +KTLAEG+ VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIKSSG----FKTLAEGQKVEFEITEG 57
Query: 259 DKG 261
DKG
Sbjct: 58 DKG 60
>gi|222528760|ref|YP_002572642.1| cold-shock DNA-binding domain-containing protein
[Caldicellulosiruptor bescii DSM 6725]
gi|222455607|gb|ACM59869.1| cold-shock DNA-binding domain protein [Caldicellulosiruptor bescii
DSM 6725]
Length = 66
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI + + EDVFVH I YKTLAEG+TVEFDI++ ++G+
Sbjct: 3 GKVKWFNPEKGYGFI-SADNGEDVFVHFSAINMEG----YKTLAEGQTVEFDIVKTERGN 57
Query: 96 EAINV 100
+A+NV
Sbjct: 58 QALNV 62
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI + + EDVFVH I YKTLAEG+TVEFDI++ ++GN
Sbjct: 3 GKVKWFNPEKGYGFI-SADNGEDVFVHFSAINMEG----YKTLAEGQTVEFDIVKTERGN 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QALNVRK 64
>gi|170022693|ref|YP_001719198.1| cold-shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis YPIII]
gi|169749227|gb|ACA66745.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
YPIII]
Length = 70
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPAAVNV 67
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|86157661|ref|YP_464446.1| cold-shock DNA-binding protein family protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|197123033|ref|YP_002134984.1| cold-shock DNA-binding domain-containing protein [Anaeromyxobacter
sp. K]
gi|220917823|ref|YP_002493127.1| cold-shock DNA-binding domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|85774172|gb|ABC81009.1| cold-shock DNA-binding protein family [Anaeromyxobacter
dehalogenans 2CP-C]
gi|196172882|gb|ACG73855.1| cold-shock DNA-binding domain protein [Anaeromyxobacter sp. K]
gi|219955677|gb|ACL66061.1| cold-shock DNA-binding domain protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 66
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI+ EDVFVH I+ + ++TL EGE VEFD+ QG KG
Sbjct: 4 GTVKWFNDAKGYGFISQ-EGGEDVFVHHTAIQMDG----FRTLKEGERVEFDVTQGPKGL 58
Query: 96 EAINVTGP 103
+A NV P
Sbjct: 59 QAANVRRP 66
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI+ EDVFVH I+ + ++TL EGE VEFD+ QG KG
Sbjct: 4 GTVKWFNDAKGYGFISQ-EGGEDVFVHHTAIQMDG----FRTLKEGERVEFDVTQGPKGL 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|24112787|ref|NP_707297.1| cold shock-like protein CspC [Shigella flexneri 2a str. 301]
gi|82543745|ref|YP_407692.1| cold shock-like protein CspC [Shigella boydii Sb227]
gi|33301070|sp|Q83RI9.3|CSPC_SHIFL RecName: Full=Cold shock-like protein CspC; Short=CSP-C
gi|24051715|gb|AAN43004.1| cold shock protein [Shigella flexneri 2a str. 301]
gi|81245156|gb|ABB65864.1| cold shock protein [Shigella boydii Sb227]
Length = 69
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----LKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----LKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|393758709|ref|ZP_10347529.1| cold-shock protein [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|424776028|ref|ZP_18203014.1| cold-shock protein [Alcaligenes sp. HPC1271]
gi|393163145|gb|EJC63199.1| cold-shock protein [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|422888689|gb|EKU31074.1| cold-shock protein [Alcaligenes sp. HPC1271]
Length = 81
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI + ED+F H I+ N +KTL EG+ V +++ QG
Sbjct: 15 KLSGTVKWFNDAKGFGFITPDNGGEDLFAHFSSIQMNG----FKTLKEGQKVLYEVAQGP 70
Query: 93 KGHEAINVTGP 103
KG +A+N+T P
Sbjct: 71 KGKQALNITSP 81
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI + ED+F H I+ N +KTL EG+ V +++ QG
Sbjct: 15 KLSGTVKWFNDAKGFGFITPDNGGEDLFAHFSSIQMNG----FKTLKEGQKVLYEVAQGP 70
Query: 260 KGNQ 263
KG Q
Sbjct: 71 KGKQ 74
>gi|383815630|ref|ZP_09971040.1| cold shock-like protein cspG [Serratia sp. M24T3]
gi|383295508|gb|EIC83832.1| cold shock-like protein cspG [Serratia sp. M24T3]
Length = 70
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++TK+ G+VKWF G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSTKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGAKGPSAVNVV 68
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++TK+ G+VKWF G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSTKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|90578292|ref|ZP_01234103.1| putative Cold shock-like protein [Photobacterium angustum S14]
gi|90441378|gb|EAS66558.1| putative Cold shock-like protein [Photobacterium angustum S14]
Length = 69
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKSTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITGEG----FKTLAEGQKVSFDIEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGPQAANV 66
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKSTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITGEG----FKTLAEGQKVSFDIEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|403746699|ref|ZP_10955092.1| cold-shock DNA-binding domain protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120558|gb|EJY54930.1| cold-shock DNA-binding domain protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 74
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI EDVFVH I+ N +KTL EG+ VEFDI++G KG
Sbjct: 12 GTVKWFNAEKGYGFIQV-EGGEDVFVHFSAIQGNG----FKTLDEGQAVEFDIVEGPKGP 66
Query: 96 EAINV 100
+A NV
Sbjct: 67 QAANV 71
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI EDVFVH I+ N +KTL EG+ VEFDI++G KG
Sbjct: 12 GTVKWFNAEKGYGFIQV-EGGEDVFVHFSAIQGNG----FKTLDEGQAVEFDIVEGPKGP 66
Query: 263 QFCFVLK 269
Q V K
Sbjct: 67 QAANVYK 73
>gi|90581456|ref|ZP_01237250.1| putative Cold shock-like protein [Photobacterium angustum S14]
gi|90437317|gb|EAS62514.1| putative Cold shock-like protein [Photobacterium angustum S14]
Length = 70
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GF+ + DVFVH + I +KTL EG+ V FD+
Sbjct: 1 MSNKTLGLVKWFNEEKGFGFLTQDNGGADVFVHFRAIASEG----FKTLTEGQKVSFDVE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A NV G
Sbjct: 57 QGQKGLQAANVVG 69
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GF+ + DVFVH + I +KTL EG+ V FD+
Sbjct: 1 MSNKTLGLVKWFNEEKGFGFLTQDNGGADVFVHFRAIASEG----FKTLTEGQKVSFDVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|37526673|ref|NP_930017.1| cold shock protein [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36786105|emb|CAE15157.1| cold shock protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 69
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I+ +KTLAEG+ VEF+I G
Sbjct: 3 KITGTVKWFNESKGFGFITPADGSKDVFVHFSAIQSEG----FKTLAEGQKVEFEIQDGQ 58
Query: 93 KGHEAINVT 101
KG A NVT
Sbjct: 59 KGPSAANVT 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I+ +KTLAEG+ VEF+I G
Sbjct: 3 KITGTVKWFNESKGFGFITPADGSKDVFVHFSAIQSEG----FKTLAEGQKVEFEIQDGQ 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|146283032|ref|YP_001173185.1| cold shock protein CspA [Pseudomonas stutzeri A1501]
gi|145571237|gb|ABP80343.1| cold shock protein CspA [Pseudomonas stutzeri A1501]
Length = 136
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 20 NESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLA 79
N + VV+A + G VKWF+ GYGFI + DVFVH + I+ + +++LA
Sbjct: 58 NNKKRVGEVVMAERETGTVKWFNDAKGYGFI-QRGNGADVFVHYRAIRGDG----HRSLA 112
Query: 80 EGETVEFDIMQGDKGHEAINVTG 102
EG+ VEF ++QG KG +A +V G
Sbjct: 113 EGQQVEFSVIQGQKGLQAEDVAG 135
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
VV+A + G VKWF+ GYGFI + DVFVH + I+ + +++LAEG+ VEF
Sbjct: 66 VVMAERETGTVKWFNDAKGYGFI-QRGNGADVFVHYRAIRGDG----HRSLAEGQQVEFS 120
Query: 255 IMQGDKGNQ 263
++QG KG Q
Sbjct: 121 VIQGQKGLQ 129
>gi|123444003|ref|YP_001007973.1| major cold shock protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332163163|ref|YP_004299740.1| major cold shock protein CspA1 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310173|ref|YP_006006229.1| cold shock protein CspG [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418242200|ref|ZP_12868715.1| major cold shock protein CspA1 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550740|ref|ZP_20506783.1| Cold shock protein CspG [Yersinia enterocolitica IP 10393]
gi|1778828|gb|AAB40924.1| major cold shock protein CSPA2 [Yersinia enterocolitica]
gi|122090964|emb|CAL13846.1| major cold shock protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318603953|emb|CBY25451.1| cold shock protein CspG [Yersinia enterocolitica subsp. palearctica
Y11]
gi|325667393|gb|ADZ44037.1| major cold shock protein CspA1 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862836|emb|CBX72977.1| cold shock-like protein cspB [Yersinia enterocolitica W22703]
gi|351778337|gb|EHB20496.1| major cold shock protein CspA1 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431787839|emb|CCO69823.1| Cold shock protein CspG [Yersinia enterocolitica IP 10393]
Length = 70
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPSAVNV 67
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|343510992|ref|ZP_08748183.1| putative cold shock-like protein [Vibrio scophthalmi LMG 19158]
gi|343516623|ref|ZP_08753658.1| putative cold shock-like protein [Vibrio sp. N418]
gi|342796208|gb|EGU31903.1| putative cold shock-like protein [Vibrio sp. N418]
gi|342799938|gb|EGU35488.1| putative cold shock-like protein [Vibrio scophthalmi LMG 19158]
Length = 70
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GFI+ + DVFVH + I + +KTL+EG+ V F++
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFISQDNGGADVFVHFRAI----ASEGFKTLSEGQKVSFEVE 56
Query: 90 QGDKGHEAINVT 101
QG KG +A NVT
Sbjct: 57 QGQKGPQASNVT 68
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GFI+ + DVFVH + I + +KTL+EG+ V F++
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFISQDNGGADVFVHFRAI----ASEGFKTLSEGQKVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|302871348|ref|YP_003839984.1| cold-shock DNA-binding domain-containing protein
[Caldicellulosiruptor obsidiansis OB47]
gi|312128141|ref|YP_003993015.1| cold-shock DNA-binding domain-containing protein
[Caldicellulosiruptor hydrothermalis 108]
gi|312134639|ref|YP_004001977.1| cold-shock DNA-binding domain-containing protein
[Caldicellulosiruptor owensensis OL]
gi|312622949|ref|YP_004024562.1| cold-shock DNA-binding domain-containing protein
[Caldicellulosiruptor kronotskyensis 2002]
gi|312794129|ref|YP_004027052.1| cold-shock DNA-binding domain-containing protein
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|302574207|gb|ADL41998.1| cold-shock DNA-binding domain protein [Caldicellulosiruptor
obsidiansis OB47]
gi|311774690|gb|ADQ04177.1| cold-shock DNA-binding domain protein [Caldicellulosiruptor
owensensis OL]
gi|311778160|gb|ADQ07646.1| cold-shock DNA-binding domain protein [Caldicellulosiruptor
hydrothermalis 108]
gi|312181269|gb|ADQ41439.1| cold-shock DNA-binding domain protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312203416|gb|ADQ46743.1| cold-shock DNA-binding domain protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 66
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI + + EDVFVH I YKTLAEG+TVEFDI++ ++G+
Sbjct: 3 GRVKWFNPEKGYGFI-SADNGEDVFVHFSAINMEG----YKTLAEGQTVEFDIVKTERGN 57
Query: 96 EAINV 100
+A+NV
Sbjct: 58 QAMNV 62
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI + + EDVFVH I YKTLAEG+TVEFDI++ ++GN
Sbjct: 3 GRVKWFNPEKGYGFI-SADNGEDVFVHFSAINMEG----YKTLAEGQTVEFDIVKTERGN 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|90019067|gb|ABD84187.1| unknown [Yersinia sp. MH-1]
Length = 77
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
K + ++ K+ G+VKWF G+GFI +DVFVH I+ N+ +KTL EG+ V
Sbjct: 3 KGSIAMSNKMTGLVKWFDAGKGFGFITPADGGKDVFVHFSAIQSND----FKTLDEGQRV 58
Query: 85 EFDIMQGDKGHEAINV 100
EF I G KG A NV
Sbjct: 59 EFSIENGAKGPSAANV 74
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
K + ++ K+ G+VKWF G+GFI +DVFVH I+ N+ +KTL EG+ V
Sbjct: 3 KGSIAMSNKMTGLVKWFDAGKGFGFITPADGGKDVFVHFSAIQSND----FKTLDEGQRV 58
Query: 252 EFDIMQGDKG 261
EF I G KG
Sbjct: 59 EFSIENGAKG 68
>gi|206579907|ref|YP_002240730.1| cold-shock DNA-binding protein [Klebsiella pneumoniae 342]
gi|206568965|gb|ACI10741.1| 'cold-shock' DNA-binding domain protein [Klebsiella pneumoniae 342]
Length = 72
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ +++ G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I
Sbjct: 1 MTSRIMGLVKWFNEDKGFGFISPLDGSKDIFVHLSALNGDN----FKTLFEGQKVEFAIH 56
Query: 90 QGDKGHEAINVT 101
+GDKG A NVT
Sbjct: 57 RGDKGPAAANVT 68
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ +++ G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I
Sbjct: 1 MTSRIMGLVKWFNEDKGFGFISPLDGSKDIFVHLSALNGDN----FKTLFEGQKVEFAIH 56
Query: 257 QGDKG 261
+GDKG
Sbjct: 57 RGDKG 61
>gi|432528974|ref|ZP_19766039.1| cold shock-like protein CspB [Escherichia coli KTE233]
gi|431058936|gb|ELD68313.1| cold shock-like protein CspB [Escherichia coli KTE233]
Length = 70
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPADGSKDVFVHFSAIQSND----YKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINVTG 102
G KG A NV G
Sbjct: 57 NGAKGPAAGNVVG 69
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPADGSKDVFVHFSAIQSND----YKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|436598336|ref|ZP_20512766.1| cold shock protein, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434976534|gb|ELL68759.1| cold shock protein, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
Length = 80
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
++ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 10 IMTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSV 65
Query: 89 MQGDKGHEAINV 100
QG KG A+NV
Sbjct: 66 EQGPKGPSAVNV 77
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
++ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 10 IMTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSV 65
Query: 256 MQGDKG 261
QG KG
Sbjct: 66 EQGPKG 71
>gi|336250667|ref|YP_004594377.1| cold-shock' DNA-binding domain-containing protein [Enterobacter
aerogenes KCTC 2190]
gi|334736723|gb|AEG99098.1| 'cold-shock' DNA-binding domain protein [Enterobacter aerogenes
KCTC 2190]
Length = 72
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ +++ G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I
Sbjct: 1 MTSRIMGLVKWFNEDKGFGFISPLDGSKDIFVHLSALNGDN----FKTLFEGQKVEFAIH 56
Query: 90 QGDKGHEAINVT 101
+GDKG A NVT
Sbjct: 57 RGDKGPTAANVT 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ +++ G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I
Sbjct: 1 MTSRIMGLVKWFNEDKGFGFISPLDGSKDIFVHLSALNGDN----FKTLFEGQKVEFAIH 56
Query: 257 QGDKG 261
+GDKG
Sbjct: 57 RGDKG 61
>gi|119776095|ref|YP_928835.1| cold-shock DNA-binding domain-containing protein [Shewanella
amazonensis SB2B]
gi|119768595|gb|ABM01166.1| cold-shock DNA-binding protein family [Shewanella amazonensis SB2B]
Length = 70
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G VKWF+ G+GFI + DVFVH + I + +KTLAEG+ V+F++
Sbjct: 1 MSIKTTGSVKWFNETKGFGFITPDNGGADVFVHFRAIAVDG----FKTLAEGQQVQFNVE 56
Query: 90 QGDKGHEAINVT 101
QG+KG +A NVT
Sbjct: 57 QGNKGPQAANVT 68
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G VKWF+ G+GFI + DVFVH + I + +KTLAEG+ V+F++
Sbjct: 1 MSIKTTGSVKWFNETKGFGFITPDNGGADVFVHFRAIAVDG----FKTLAEGQQVQFNVE 56
Query: 257 QGDKGNQ 263
QG+KG Q
Sbjct: 57 QGNKGPQ 63
>gi|441503254|ref|ZP_20985261.1| Cold shock protein CspA [Photobacterium sp. AK15]
gi|441429470|gb|ELR66925.1| Cold shock protein CspA [Photobacterium sp. AK15]
Length = 70
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GFI + DVFVH + I + +KTL+EG+ V FD+
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLSEGQKVSFDVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGPQAANV 67
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GFI + DVFVH + I + +KTL+EG+ V FD+
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLSEGQKVSFDVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|407716611|ref|YP_006837891.1| cold shock-like protein [Cycloclasticus sp. P1]
gi|407256947|gb|AFT67388.1| Cold shock-like protein [Cycloclasticus sp. P1]
Length = 71
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ +V G+VKWF+ G+GFI + EDVFVH + I+ + ++TL E + VEF I
Sbjct: 1 MSERVRGIVKWFNNSKGFGFIQPDAGGEDVFVHFRAIQGDG----FRTLKENQAVEFTIT 56
Query: 90 QGDKGHEAINVTG 102
+GDKG +A VTG
Sbjct: 57 KGDKGLQAEEVTG 69
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ +V G+VKWF+ G+GFI + EDVFVH + I+ + ++TL E + VEF I
Sbjct: 1 MSERVRGIVKWFNNSKGFGFIQPDAGGEDVFVHFRAIQGDG----FRTLKENQAVEFTIT 56
Query: 257 QGDKGNQ 263
+GDKG Q
Sbjct: 57 KGDKGLQ 63
>gi|379736329|ref|YP_005329835.1| cold shock protein [Blastococcus saxobsidens DD2]
gi|378784136|emb|CCG03804.1| Cold shock protein [Blastococcus saxobsidens DD2]
Length = 110
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFIA DVF H I N YK+L EG+ VEFD+ QG KG
Sbjct: 47 GTVKWFNAEKGFGFIAQDGGGADVFCHYSAISGNG----YKSLDEGQQVEFDVTQGQKGP 102
Query: 96 EAINV 100
+A NV
Sbjct: 103 QAENV 107
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFIA DVF H I N YK+L EG+ VEFD+ QG KG
Sbjct: 47 GTVKWFNAEKGFGFIAQDGGGADVFCHYSAISGNG----YKSLDEGQQVEFDVTQGQKGP 102
Query: 263 Q 263
Q
Sbjct: 103 Q 103
>gi|344339759|ref|ZP_08770687.1| cold-shock DNA-binding domain protein [Thiocapsa marina 5811]
gi|343800495|gb|EGV18441.1| cold-shock DNA-binding domain protein [Thiocapsa marina 5811]
Length = 68
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ GVVKWF+ GYGF+ +EDVFVH I + YKTL EG+ V+F+I QG K
Sbjct: 2 ITGVVKWFNNAKGYGFVQPDGRDEDVFVHFSAIDMDG----YKTLREGQKVQFEISQGPK 57
Query: 94 GHEAINV 100
G A NV
Sbjct: 58 GLHAANV 64
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ GVVKWF+ GYGF+ +EDVFVH I + YKTL EG+ V+F+I QG K
Sbjct: 2 ITGVVKWFNNAKGYGFVQPDGRDEDVFVHFSAIDMDG----YKTLREGQKVQFEISQGPK 57
Query: 261 G 261
G
Sbjct: 58 G 58
>gi|207856095|ref|YP_002242746.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|378698582|ref|YP_005180539.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|206707898|emb|CAR32186.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|301157230|emb|CBW16717.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
Length = 70
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I
Sbjct: 1 MMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEIT 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPSAANVT 68
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ +K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I
Sbjct: 1 MMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEIT 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|251789584|ref|YP_003004305.1| cold shock-like protein CspC [Dickeya zeae Ech1591]
gi|271500505|ref|YP_003333530.1| cold-shock DNA-binding domain-containing protein [Dickeya dadantii
Ech586]
gi|307131152|ref|YP_003883168.1| stress protein, member of the CspA-family [Dickeya dadantii 3937]
gi|247538205|gb|ACT06826.1| cold-shock DNA-binding domain protein [Dickeya zeae Ech1591]
gi|270344060|gb|ACZ76825.1| cold-shock DNA-binding domain protein [Dickeya dadantii Ech586]
gi|306528681|gb|ADM98611.1| stress protein, member of the CspA-family [Dickeya dadantii 3937]
Length = 69
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NV
Sbjct: 58 QKGPSAVNVV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|192360401|ref|YP_001982239.1| cold-shock domain family protein [Cellvibrio japonicus Ueda107]
gi|190686566|gb|ACE84244.1| cold-shock domain family protein [Cellvibrio japonicus Ueda107]
Length = 71
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A + G VKWF+ GYGFI +ED+FVH + I+ Y++LAEG++VEF +
Sbjct: 1 MADREIGTVKWFNNVRGYGFITRGEGSEDIFVHYRNIRAEG----YRSLAEGQSVEFQLQ 56
Query: 90 QGDKGHEAINV 100
+G+KG +A +V
Sbjct: 57 KGEKGLQAEDV 67
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A + G VKWF+ GYGFI +ED+FVH + I+ Y++LAEG++VEF +
Sbjct: 1 MADREIGTVKWFNNVRGYGFITRGEGSEDIFVHYRNIRAEG----YRSLAEGQSVEFQLQ 56
Query: 257 QGDKGNQ 263
+G+KG Q
Sbjct: 57 KGEKGLQ 63
>gi|119503291|ref|ZP_01625375.1| putative Cold-shock protein [marine gamma proteobacterium HTCC2080]
gi|119460937|gb|EAW42028.1| putative Cold-shock protein [marine gamma proteobacterium HTCC2080]
Length = 70
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ + GVVKWF+ G+GFI ED+FVH + I+ + Y++L EG+ VEF +
Sbjct: 1 MSERQTGVVKWFNNAKGFGFITMTDREEDIFVHFRAIQGDG----YRSLNEGDAVEFTLA 56
Query: 90 QGDKGHEAINVTGP 103
+GDKG +A VT P
Sbjct: 57 EGDKGLQAEEVTKP 70
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ + GVVKWF+ G+GFI ED+FVH + I+ + Y++L EG+ VEF +
Sbjct: 1 MSERQTGVVKWFNNAKGFGFITMTDREEDIFVHFRAIQGDG----YRSLNEGDAVEFTLA 56
Query: 257 QGDKGNQ 263
+GDKG Q
Sbjct: 57 EGDKGLQ 63
>gi|45443632|ref|NP_995171.1| cold-shock protein CspA [Yersinia pestis biovar Microtus str.
91001]
gi|145597567|ref|YP_001161643.1| major cold shock protein Cspa1 [Yersinia pestis Pestoides F]
gi|153997418|ref|ZP_02022518.1| major cold shock protein Cspa1 [Yersinia pestis CA88-4125]
gi|162420218|ref|YP_001605761.1| cold shock DNA-binding domain-containing protein [Yersinia pestis
Angola]
gi|165927555|ref|ZP_02223387.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937557|ref|ZP_02226120.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166012240|ref|ZP_02233138.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166214174|ref|ZP_02240209.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167401977|ref|ZP_02307460.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167420574|ref|ZP_02312327.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425550|ref|ZP_02317303.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|170022695|ref|YP_001719200.1| cold-shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis YPIII]
gi|218930654|ref|YP_002348529.1| cold-shock protein CspA [Yersinia pestis CO92]
gi|229836787|ref|ZP_04456952.1| major cold shock protein Cspa1 [Yersinia pestis Pestoides A]
gi|229839313|ref|ZP_04459472.1| major cold shock protein Cspa1 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229899877|ref|ZP_04515018.1| major cold shock protein Cspa1 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904188|ref|ZP_04519299.1| major cold shock protein Cspa1 [Yersinia pestis Nepal516]
gi|270488627|ref|ZP_06205701.1| transcriptional repressor activity CueR [Yersinia pestis KIM D27]
gi|384138501|ref|YP_005521203.1| major cold shock protein Cspa1 [Yersinia pestis A1122]
gi|384416689|ref|YP_005626051.1| major cold shock protein Cspa1 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420548804|ref|ZP_15046575.1| cold shock-like protein CspG [Yersinia pestis PY-01]
gi|420554158|ref|ZP_15051351.1| cold shock-like protein CspG [Yersinia pestis PY-02]
gi|420559770|ref|ZP_15056226.1| cold shock-like protein CspG [Yersinia pestis PY-03]
gi|420565152|ref|ZP_15061064.1| cold shock-like protein CspG [Yersinia pestis PY-04]
gi|420570190|ref|ZP_15065641.1| cold shock-like protein CspG [Yersinia pestis PY-05]
gi|420575861|ref|ZP_15070771.1| cold shock-like protein CspG [Yersinia pestis PY-06]
gi|420581162|ref|ZP_15075593.1| cold shock-like protein CspG [Yersinia pestis PY-07]
gi|420586537|ref|ZP_15080455.1| cold shock-like protein CspG [Yersinia pestis PY-08]
gi|420591637|ref|ZP_15085045.1| cold shock-like protein CspG [Yersinia pestis PY-09]
gi|420597016|ref|ZP_15089880.1| cold shock-like protein CspG [Yersinia pestis PY-10]
gi|420602717|ref|ZP_15094942.1| cold shock-like protein CspG [Yersinia pestis PY-11]
gi|420608078|ref|ZP_15099810.1| cold shock-like protein CspG [Yersinia pestis PY-12]
gi|420613504|ref|ZP_15104668.1| cold shock-like protein CspG [Yersinia pestis PY-13]
gi|420618868|ref|ZP_15109345.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|420624177|ref|ZP_15114127.1| cold shock-like protein CspG [Yersinia pestis PY-15]
gi|420625898|ref|ZP_15115700.1| cold shock-like protein CspG [Yersinia pestis PY-16]
gi|420631079|ref|ZP_15120388.1| cold shock-like protein CspG [Yersinia pestis PY-19]
gi|420639594|ref|ZP_15128021.1| cold shock-like protein CspG [Yersinia pestis PY-25]
gi|420645044|ref|ZP_15133005.1| cold shock-like protein CspG [Yersinia pestis PY-29]
gi|420650354|ref|ZP_15137789.1| cold shock-like protein CspG [Yersinia pestis PY-32]
gi|420655992|ref|ZP_15142864.1| cold shock-like protein CspG [Yersinia pestis PY-34]
gi|420661425|ref|ZP_15147713.1| cold shock-like protein CspG [Yersinia pestis PY-36]
gi|420666780|ref|ZP_15152542.1| cold shock-like protein CspG [Yersinia pestis PY-42]
gi|420671638|ref|ZP_15156973.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|420676973|ref|ZP_15161825.1| cold shock-like protein CspG [Yersinia pestis PY-46]
gi|420682538|ref|ZP_15166844.1| cold shock-like protein CspG [Yersinia pestis PY-47]
gi|420687943|ref|ZP_15171652.1| cold shock-like protein CspG [Yersinia pestis PY-48]
gi|420689638|ref|ZP_15173155.1| cold shock-like protein CspG [Yersinia pestis PY-52]
gi|420698946|ref|ZP_15181317.1| cold shock-like protein CspG [Yersinia pestis PY-53]
gi|420704806|ref|ZP_15185952.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|420710098|ref|ZP_15190686.1| cold shock-like protein CspG [Yersinia pestis PY-55]
gi|420715601|ref|ZP_15195564.1| cold shock-like protein CspG [Yersinia pestis PY-56]
gi|420721122|ref|ZP_15200290.1| cold shock-like protein CspG [Yersinia pestis PY-58]
gi|420726576|ref|ZP_15205102.1| cold shock-like protein CspG [Yersinia pestis PY-59]
gi|420732101|ref|ZP_15210071.1| cold shock-like protein CspG [Yersinia pestis PY-60]
gi|420737068|ref|ZP_15214559.1| cold shock-like protein CspG [Yersinia pestis PY-61]
gi|420742547|ref|ZP_15219483.1| cold shock-like protein CspG [Yersinia pestis PY-63]
gi|420748422|ref|ZP_15224424.1| cold shock-like protein CspG [Yersinia pestis PY-64]
gi|420753695|ref|ZP_15229160.1| cold shock-like protein CspG [Yersinia pestis PY-65]
gi|420759645|ref|ZP_15233928.1| cold shock-like protein CspG [Yersinia pestis PY-66]
gi|420764853|ref|ZP_15238536.1| cold shock-like protein CspG [Yersinia pestis PY-71]
gi|420766802|ref|ZP_15240303.1| cold shock-like protein CspG [Yersinia pestis PY-72]
gi|420775063|ref|ZP_15247739.1| cold shock-like protein CspG [Yersinia pestis PY-76]
gi|420776892|ref|ZP_15249363.1| cold shock-like protein CspG [Yersinia pestis PY-88]
gi|420786292|ref|ZP_15257579.1| cold shock-like protein CspG [Yersinia pestis PY-89]
gi|420791343|ref|ZP_15262120.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|420796912|ref|ZP_15267133.1| cold shock-like protein CspG [Yersinia pestis PY-91]
gi|420802009|ref|ZP_15271708.1| cold shock-like protein CspG [Yersinia pestis PY-92]
gi|420807350|ref|ZP_15276554.1| cold shock-like protein CspG [Yersinia pestis PY-93]
gi|420812734|ref|ZP_15281376.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|420818227|ref|ZP_15286357.1| cold shock-like protein CspG [Yersinia pestis PY-95]
gi|420823559|ref|ZP_15291124.1| cold shock-like protein CspG [Yersinia pestis PY-96]
gi|420828624|ref|ZP_15295687.1| cold shock-like protein CspG [Yersinia pestis PY-98]
gi|420834221|ref|ZP_15300739.1| cold shock-like protein CspG [Yersinia pestis PY-99]
gi|420835859|ref|ZP_15302223.1| cold shock-like protein CspG [Yersinia pestis PY-100]
gi|420841006|ref|ZP_15306884.1| cold shock-like protein CspG [Yersinia pestis PY-101]
gi|420846624|ref|ZP_15311961.1| cold shock-like protein CspG [Yersinia pestis PY-102]
gi|420855720|ref|ZP_15319815.1| cold shock-like protein CspG [Yersinia pestis PY-103]
gi|420860818|ref|ZP_15324311.1| cold shock-like protein CspG [Yersinia pestis PY-113]
gi|421765158|ref|ZP_16201945.1| major cold shock protein Cspa1 [Yersinia pestis INS]
gi|45438502|gb|AAS64048.1| major cold shock protein Cspa1 [Yersinia pestis biovar Microtus
str. 91001]
gi|115349265|emb|CAL22232.1| major cold shock protein Cspa1 [Yersinia pestis CO92]
gi|145209263|gb|ABP38670.1| cold-shock DNA-binding protein family [Yersinia pestis Pestoides F]
gi|149289055|gb|EDM39135.1| major cold shock protein Cspa1 [Yersinia pestis CA88-4125]
gi|162353033|gb|ABX86981.1| cold shock DNA-binding domain protein [Yersinia pestis Angola]
gi|165914662|gb|EDR33276.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920449|gb|EDR37726.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165988859|gb|EDR41160.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166204661|gb|EDR49141.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166961380|gb|EDR57401.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167048563|gb|EDR59971.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055564|gb|EDR65357.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169749229|gb|ACA66747.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
YPIII]
gi|229678306|gb|EEO74411.1| major cold shock protein Cspa1 [Yersinia pestis Nepal516]
gi|229687369|gb|EEO79444.1| major cold shock protein Cspa1 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695679|gb|EEO85726.1| major cold shock protein Cspa1 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229705730|gb|EEO91739.1| major cold shock protein Cspa1 [Yersinia pestis Pestoides A]
gi|270337131|gb|EFA47908.1| transcriptional repressor activity CueR [Yersinia pestis KIM D27]
gi|320017193|gb|ADW00765.1| major cold shock protein Cspa1 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342853630|gb|AEL72183.1| major cold shock protein Cspa1 [Yersinia pestis A1122]
gi|391421757|gb|EIQ84417.1| cold shock-like protein CspG [Yersinia pestis PY-01]
gi|391421940|gb|EIQ84579.1| cold shock-like protein CspG [Yersinia pestis PY-02]
gi|391422076|gb|EIQ84695.1| cold shock-like protein CspG [Yersinia pestis PY-03]
gi|391436852|gb|EIQ97771.1| cold shock-like protein CspG [Yersinia pestis PY-04]
gi|391438005|gb|EIQ98806.1| cold shock-like protein CspG [Yersinia pestis PY-05]
gi|391441718|gb|EIR02185.1| cold shock-like protein CspG [Yersinia pestis PY-06]
gi|391453887|gb|EIR13150.1| cold shock-like protein CspG [Yersinia pestis PY-07]
gi|391454204|gb|EIR13437.1| cold shock-like protein CspG [Yersinia pestis PY-08]
gi|391456279|gb|EIR15321.1| cold shock-like protein CspG [Yersinia pestis PY-09]
gi|391469826|gb|EIR27561.1| cold shock-like protein CspG [Yersinia pestis PY-10]
gi|391470528|gb|EIR28187.1| cold shock-like protein CspG [Yersinia pestis PY-11]
gi|391472006|gb|EIR29511.1| cold shock-like protein CspG [Yersinia pestis PY-12]
gi|391485509|gb|EIR41642.1| cold shock-like protein CspG [Yersinia pestis PY-13]
gi|391487163|gb|EIR43126.1| cold shock-like protein CspG [Yersinia pestis PY-15]
gi|391487183|gb|EIR43144.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|391506693|gb|EIR60591.1| cold shock-like protein CspG [Yersinia pestis PY-25]
gi|391511356|gb|EIR64779.1| cold shock-like protein CspG [Yersinia pestis PY-16]
gi|391512605|gb|EIR65906.1| cold shock-like protein CspG [Yersinia pestis PY-19]
gi|391517639|gb|EIR70421.1| cold shock-like protein CspG [Yersinia pestis PY-29]
gi|391518836|gb|EIR71522.1| cold shock-like protein CspG [Yersinia pestis PY-34]
gi|391519688|gb|EIR72307.1| cold shock-like protein CspG [Yersinia pestis PY-32]
gi|391532142|gb|EIR83568.1| cold shock-like protein CspG [Yersinia pestis PY-36]
gi|391534982|gb|EIR86103.1| cold shock-like protein CspG [Yersinia pestis PY-42]
gi|391537451|gb|EIR88347.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|391550550|gb|EIS00155.1| cold shock-like protein CspG [Yersinia pestis PY-46]
gi|391550754|gb|EIS00335.1| cold shock-like protein CspG [Yersinia pestis PY-47]
gi|391551044|gb|EIS00594.1| cold shock-like protein CspG [Yersinia pestis PY-48]
gi|391566641|gb|EIS14609.1| cold shock-like protein CspG [Yersinia pestis PY-53]
gi|391570474|gb|EIS17933.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|391575195|gb|EIS21955.1| cold shock-like protein CspG [Yersinia pestis PY-52]
gi|391580120|gb|EIS26151.1| cold shock-like protein CspG [Yersinia pestis PY-55]
gi|391581835|gb|EIS27677.1| cold shock-like protein CspG [Yersinia pestis PY-56]
gi|391592301|gb|EIS36739.1| cold shock-like protein CspG [Yersinia pestis PY-58]
gi|391595715|gb|EIS39727.1| cold shock-like protein CspG [Yersinia pestis PY-60]
gi|391596525|gb|EIS40452.1| cold shock-like protein CspG [Yersinia pestis PY-59]
gi|391610263|gb|EIS52569.1| cold shock-like protein CspG [Yersinia pestis PY-61]
gi|391610577|gb|EIS52840.1| cold shock-like protein CspG [Yersinia pestis PY-63]
gi|391612304|gb|EIS54389.1| cold shock-like protein CspG [Yersinia pestis PY-64]
gi|391623545|gb|EIS64315.1| cold shock-like protein CspG [Yersinia pestis PY-65]
gi|391627008|gb|EIS67270.1| cold shock-like protein CspG [Yersinia pestis PY-66]
gi|391633843|gb|EIS73190.1| cold shock-like protein CspG [Yersinia pestis PY-71]
gi|391644360|gb|EIS82373.1| cold shock-like protein CspG [Yersinia pestis PY-72]
gi|391645951|gb|EIS83762.1| cold shock-like protein CspG [Yersinia pestis PY-76]
gi|391653583|gb|EIS90520.1| cold shock-like protein CspG [Yersinia pestis PY-89]
gi|391659022|gb|EIS95370.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|391661383|gb|EIS97432.1| cold shock-like protein CspG [Yersinia pestis PY-88]
gi|391666561|gb|EIT02008.1| cold shock-like protein CspG [Yersinia pestis PY-91]
gi|391675885|gb|EIT10358.1| cold shock-like protein CspG [Yersinia pestis PY-93]
gi|391676229|gb|EIT10658.1| cold shock-like protein CspG [Yersinia pestis PY-92]
gi|391676601|gb|EIT10990.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|391690095|gb|EIT23161.1| cold shock-like protein CspG [Yersinia pestis PY-95]
gi|391692355|gb|EIT25207.1| cold shock-like protein CspG [Yersinia pestis PY-96]
gi|391693899|gb|EIT26606.1| cold shock-like protein CspG [Yersinia pestis PY-98]
gi|391707369|gb|EIT38726.1| cold shock-like protein CspG [Yersinia pestis PY-99]
gi|391719348|gb|EIT49468.1| cold shock-like protein CspG [Yersinia pestis PY-100]
gi|391719658|gb|EIT49739.1| cold shock-like protein CspG [Yersinia pestis PY-101]
gi|391723494|gb|EIT53168.1| cold shock-like protein CspG [Yersinia pestis PY-103]
gi|391726613|gb|EIT55936.1| cold shock-like protein CspG [Yersinia pestis PY-113]
gi|391730483|gb|EIT59310.1| cold shock-like protein CspG [Yersinia pestis PY-102]
gi|411174064|gb|EKS44101.1| major cold shock protein Cspa1 [Yersinia pestis INS]
Length = 70
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPSAVNV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|222099783|ref|YP_002534351.1| Cold-shock DNA-binding protein family [Thermotoga neapolitana DSM
4359]
gi|221572173|gb|ACM22985.1| Cold-shock DNA-binding protein family [Thermotoga neapolitana DSM
4359]
Length = 78
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI T + ED+FVH I+ + +KTL E E VEFD+ QG KG
Sbjct: 15 GTVKWFDSKKGYGFI-TMENGEDIFVHWSAIQMDG----FKTLRENEPVEFDVQQGTKGP 69
Query: 96 EAINV 100
+A+NV
Sbjct: 70 QAVNV 74
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI T + ED+FVH I+ + +KTL E E VEFD+ QG KG
Sbjct: 15 GTVKWFDSKKGYGFI-TMENGEDIFVHWSAIQMDG----FKTLRENEPVEFDVQQGTKGP 69
Query: 263 Q 263
Q
Sbjct: 70 Q 70
>gi|237732149|ref|ZP_04562630.1| cspB [Citrobacter sp. 30_2]
gi|226907688|gb|EEH93606.1| cspB [Citrobacter sp. 30_2]
Length = 97
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++TK+ G+VKWF+ + G+GFI ++DVFVH I+ N +KTL E + VEF +
Sbjct: 28 MSTKMTGLVKWFNPEKGFGFITPADGSKDVFVHFSAIQSNE----FKTLNENQKVEFGVE 83
Query: 90 QGDKGHEAINVTG 102
QG KG AINV
Sbjct: 84 QGPKGPSAINVVA 96
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++TK+ G+VKWF+ + G+GFI ++DVFVH I+ N +KTL E + VEF +
Sbjct: 28 MSTKMTGLVKWFNPEKGFGFITPADGSKDVFVHFSAIQSNE----FKTLNENQKVEFGVE 83
Query: 257 QGDKG 261
QG KG
Sbjct: 84 QGPKG 88
>gi|298717348|ref|YP_003729990.1| cold shock-like protein cspI [Pantoea vagans C9-1]
gi|304395197|ref|ZP_07377081.1| cold-shock DNA-binding domain protein [Pantoea sp. aB]
gi|304395198|ref|ZP_07377082.1| cold-shock DNA-binding domain protein [Pantoea sp. aB]
gi|372274604|ref|ZP_09510640.1| cold shock-like protein cspI [Pantoea sp. SL1_M5]
gi|381406400|ref|ZP_09931083.1| cold shock-like protein cspI [Pantoea sp. Sc1]
gi|390434250|ref|ZP_10222788.1| cold shock-like protein cspI [Pantoea agglomerans IG1]
gi|440760989|ref|ZP_20940088.1| Cold shock protein CspG [Pantoea agglomerans 299R]
gi|298361537|gb|ADI78318.1| Cold shock-like protein cspI [Pantoea vagans C9-1]
gi|304357450|gb|EFM21813.1| cold-shock DNA-binding domain protein [Pantoea sp. aB]
gi|304357451|gb|EFM21814.1| cold-shock DNA-binding domain protein [Pantoea sp. aB]
gi|380735702|gb|EIB96766.1| cold shock-like protein cspI [Pantoea sp. Sc1]
gi|436425434|gb|ELP23172.1| Cold shock protein CspG [Pantoea agglomerans 299R]
Length = 70
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPQDGSKDVFVHFSAIQSND----YKTLDEGQQVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NV
Sbjct: 57 NGAKGPSAANVV 68
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPQDGSKDVFVHFSAIQSND----YKTLDEGQQVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|192360604|ref|YP_001983030.1| cold-shock protein CspD [Cellvibrio japonicus Ueda107]
gi|190686769|gb|ACE84447.1| cold-shock protein CspD [Cellvibrio japonicus Ueda107]
Length = 125
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 24 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 83
+K+P++ G VKWF+ GYGFI ED+F H I + YKTL G+
Sbjct: 37 QKDPIM----PTGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDG----YKTLKAGQQ 88
Query: 84 VEFDIMQGDKGHEAINVTGP 103
V F+I +GDKG AIN+ P
Sbjct: 89 VSFEITRGDKGLHAINIVAP 108
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 191 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 250
+K+P++ G VKWF+ GYGFI ED+F H I + YKTL G+
Sbjct: 37 QKDPIM----PTGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDG----YKTLKAGQQ 88
Query: 251 VEFDIMQGDKG 261
V F+I +GDKG
Sbjct: 89 VSFEITRGDKG 99
>gi|156934364|ref|YP_001438280.1| hypothetical protein ESA_02195 [Cronobacter sakazakii ATCC BAA-894]
gi|389841340|ref|YP_006343424.1| cold shock protein CspG [Cronobacter sakazakii ES15]
gi|417789981|ref|ZP_12437578.1| hypothetical protein CSE899_04962 [Cronobacter sakazakii E899]
gi|424799228|ref|ZP_18224770.1| Cold shock protein CspG [Cronobacter sakazakii 696]
gi|429108423|ref|ZP_19170292.1| Cold shock protein CspG [Cronobacter malonaticus 681]
gi|429109930|ref|ZP_19171700.1| Cold shock protein CspG [Cronobacter malonaticus 507]
gi|429115192|ref|ZP_19176110.1| Cold shock protein CspG [Cronobacter sakazakii 701]
gi|429120174|ref|ZP_19180858.1| Cold shock protein CspG [Cronobacter sakazakii 680]
gi|449308598|ref|YP_007440954.1| cold shock protein CspG [Cronobacter sakazakii SP291]
gi|156532618|gb|ABU77444.1| hypothetical protein ESA_02195 [Cronobacter sakazakii ATCC BAA-894]
gi|333955930|gb|EGL73636.1| hypothetical protein CSE899_04962 [Cronobacter sakazakii E899]
gi|387851816|gb|AFJ99913.1| putative cold shock protein CspG [Cronobacter sakazakii ES15]
gi|423234949|emb|CCK06640.1| Cold shock protein CspG [Cronobacter sakazakii 696]
gi|426295146|emb|CCJ96405.1| Cold shock protein CspG [Cronobacter malonaticus 681]
gi|426311087|emb|CCJ97813.1| Cold shock protein CspG [Cronobacter malonaticus 507]
gi|426318321|emb|CCK02223.1| Cold shock protein CspG [Cronobacter sakazakii 701]
gi|426325240|emb|CCK11595.1| Cold shock protein CspG [Cronobacter sakazakii 680]
gi|449098631|gb|AGE86665.1| cold shock protein CspG [Cronobacter sakazakii SP291]
Length = 70
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N ++TL EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNADKGFGFIAPADGSKDVFVHFSAIQSDN----FRTLTEGQQVEFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGAKGPSAVNVV 68
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N ++TL EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNADKGFGFIAPADGSKDVFVHFSAIQSDN----FRTLTEGQQVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|429083215|ref|ZP_19146261.1| Cold shock protein CspG [Cronobacter condimenti 1330]
gi|426548030|emb|CCJ72302.1| Cold shock protein CspG [Cronobacter condimenti 1330]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N Y++L+EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNSDKGFGFIAPADGSKDVFVHFSAIQSDN----YRSLSEGQQVEFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGAKGPSAVNVV 68
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N Y++L+EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNSDKGFGFIAPADGSKDVFVHFSAIQSDN----YRSLSEGQQVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|187250904|ref|YP_001875386.1| cold-shock DNA-binding domain-containing protein [Elusimicrobium
minutum Pei191]
gi|186971064|gb|ACC98049.1| Cold-shock DNA-binding domain protein [Elusimicrobium minutum
Pei191]
Length = 66
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGF+ ++D+FVH + IK +KTL+EG+ VEFDI++ DKG
Sbjct: 4 GKVKWFNDQKGYGFVTPEDGSKDLFVHYQEIKGEG----FKTLSEGQEVEFDIVESDKGP 59
Query: 96 EAINV 100
+A+NV
Sbjct: 60 KAVNV 64
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ + GYGF+ ++D+FVH + IK +KTL+EG+ VEFDI++ DKG
Sbjct: 4 GKVKWFNDQKGYGFVTPEDGSKDLFVHYQEIKGEG----FKTLSEGQEVEFDIVESDKG 58
>gi|317492863|ref|ZP_07951287.1| cold-shock' DNA-binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|365835510|ref|ZP_09376929.1| cold shock-like protein CspI [Hafnia alvei ATCC 51873]
gi|316918985|gb|EFV40320.1| cold-shock' DNA-binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|364566085|gb|EHM43789.1| cold shock-like protein CspI [Hafnia alvei ATCC 51873]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPEDGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGAKGPSAVNVV 68
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPEDGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|332670111|ref|YP_004453119.1| cold-shock DNA-binding domain-containing protein [Cellulomonas fimi
ATCC 484]
gi|332339149|gb|AEE45732.1| cold-shock DNA-binding domain protein [Cellulomonas fimi ATCC 484]
Length = 67
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFIA DVFVH I Y++L EG+ VEF+I QGDKG
Sbjct: 4 GAVKWFNAEKGYGFIAQDGGGADVFVHYSAIDTQG----YRSLDEGQRVEFEITQGDKGP 59
Query: 96 EAINV 100
+A +V
Sbjct: 60 QAEHV 64
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFIA DVFVH I Y++L EG+ VEF+I QGDKG
Sbjct: 4 GAVKWFNAEKGYGFIAQDGGGADVFVHYSAIDTQG----YRSLDEGQRVEFEITQGDKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|260904248|ref|ZP_05912570.1| cold-shock DNA-binding domain protein [Brevibacterium linens BL2]
Length = 67
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI +N+DVFVH I+ + Y+ L EG+ VEF++ +G KG
Sbjct: 4 GTVKWFNAEKGYGFITLEGNNQDVFVHWSAIQMDG----YRALEEGQQVEFEVGEGQKGP 59
Query: 96 EAINVT 101
+A +VT
Sbjct: 60 QAESVT 65
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI +N+DVFVH I+ + Y+ L EG+ VEF++ +G KG
Sbjct: 4 GTVKWFNAEKGYGFITLEGNNQDVFVHWSAIQMDG----YRALEEGQQVEFEVGEGQKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|162447160|ref|YP_001620292.1| DNA-binding cold shock protein [Acholeplasma laidlawii PG-8A]
gi|161985267|gb|ABX80916.1| cold shock protein, DNA-binding [Acholeplasma laidlawii PG-8A]
Length = 65
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF GYGFI T + +DVFVH I+ + YK+LAEG+ VEF+I GD+G
Sbjct: 3 GTVKWFDAGKGYGFI-TADNGKDVFVHYSAIQTDG----YKSLAEGDQVEFEIKSGDRGD 57
Query: 96 EAINVT 101
+A NV+
Sbjct: 58 QAANVS 63
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF GYGFI T + +DVFVH I+ + YK+LAEG+ VEF+I GD+G+
Sbjct: 3 GTVKWFDAGKGYGFI-TADNGKDVFVHYSAIQTDG----YKSLAEGDQVEFEIKSGDRGD 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QAANVSK 64
>gi|157370303|ref|YP_001478292.1| cold-shock DNA-binding domain-containing protein [Serratia
proteamaculans 568]
gi|157322067|gb|ABV41164.1| cold-shock DNA-binding domain protein [Serratia proteamaculans 568]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++TK+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSTKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQRVEFTIE 56
Query: 90 QGDKGHEAINV 100
G KG A NV
Sbjct: 57 NGQKGPSAGNV 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++TK+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSTKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQRVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGQKG 61
>gi|422769141|ref|ZP_16822863.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1520]
gi|323934238|gb|EGB30662.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1520]
Length = 71
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ NN ++TL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFISPADGSKDVFVHFSAIQSNN----FRTLEEGQQVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NV
Sbjct: 57 NGAKGPAAANVV 68
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ NN ++TL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFISPADGSKDVFVHFSAIQSNN----FRTLEEGQQVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|398918601|ref|ZP_10658535.1| cold shock domain protein CspD [Pseudomonas sp. GM49]
gi|398171035|gb|EJM58951.1| cold shock domain protein CspD [Pseudomonas sp. GM49]
Length = 84
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ GYGFI ED+F H IK + YKTL G++V FDI+QG KG
Sbjct: 3 VGKVKWFNNAKGYGFINEEGKTEDLFAHYSTIKMDG----YKTLKAGQSVVFDIIQGPKG 58
Query: 95 HEAINVTGP 103
A+N++ P
Sbjct: 59 LHAVNISNP 67
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ GYGFI ED+F H IK + YKTL G++V FDI+QG KG
Sbjct: 3 VGKVKWFNNAKGYGFINEEGKTEDLFAHYSTIKMDG----YKTLKAGQSVVFDIIQGPKG 58
>gi|108809647|ref|YP_653563.1| major cold shock protein Cspa2 [Yersinia pestis Antiqua]
gi|108813687|ref|YP_649454.1| major cold shock protein Cspa2 [Yersinia pestis Nepal516]
gi|145597566|ref|YP_001161642.1| major cold shock protein Cspa2 [Yersinia pestis Pestoides F]
gi|153948953|ref|YP_001399367.1| cold shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis IP 31758]
gi|153997419|ref|ZP_02022519.1| major cold shock protein Cspa2 [Yersinia pestis CA88-4125]
gi|162421711|ref|YP_001605762.1| cold shock DNA-binding domain-containing protein [Yersinia pestis
Angola]
gi|165927588|ref|ZP_02223420.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937409|ref|ZP_02225972.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166012234|ref|ZP_02233132.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166214132|ref|ZP_02240167.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167401979|ref|ZP_02307462.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167420637|ref|ZP_02312390.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425433|ref|ZP_02317186.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|218930653|ref|YP_002348528.1| cold-shock protein CspA [Yersinia pestis CO92]
gi|229836786|ref|ZP_04456951.1| major cold shock protein Cspa2 [Yersinia pestis Pestoides A]
gi|229839314|ref|ZP_04459473.1| major cold shock protein Cspa2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229899878|ref|ZP_04515019.1| major cold shock protein Cspa2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904189|ref|ZP_04519300.1| major cold shock protein Cspa2 [Yersinia pestis Nepal516]
gi|270488628|ref|ZP_06205702.1| transcriptional repressor activity CueR [Yersinia pestis KIM D27]
gi|384138500|ref|YP_005521202.1| cold shock-like protein [Yersinia pestis A1122]
gi|384416690|ref|YP_005626052.1| major cold shock protein Cspa2 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420548813|ref|ZP_15046584.1| cold shock-like protein CspG [Yersinia pestis PY-01]
gi|420554157|ref|ZP_15051350.1| cold shock-like protein CspG [Yersinia pestis PY-02]
gi|420559769|ref|ZP_15056225.1| cold shock-like protein CspG [Yersinia pestis PY-03]
gi|420565151|ref|ZP_15061063.1| cold shock-like protein CspG [Yersinia pestis PY-04]
gi|420575854|ref|ZP_15070764.1| cold shock-like protein CspG [Yersinia pestis PY-06]
gi|420581159|ref|ZP_15075590.1| cold shock-like protein CspG [Yersinia pestis PY-07]
gi|420586536|ref|ZP_15080454.1| cold shock-like protein CspG [Yersinia pestis PY-08]
gi|420591636|ref|ZP_15085044.1| cold shock-like protein CspG [Yersinia pestis PY-09]
gi|420597020|ref|ZP_15089884.1| cold shock-like protein CspG [Yersinia pestis PY-10]
gi|420602727|ref|ZP_15094952.1| cold shock-like protein CspG [Yersinia pestis PY-11]
gi|420608077|ref|ZP_15099809.1| cold shock-like protein CspG [Yersinia pestis PY-12]
gi|420613512|ref|ZP_15104676.1| cold shock-like protein CspG [Yersinia pestis PY-13]
gi|420618867|ref|ZP_15109344.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|420624191|ref|ZP_15114141.1| cold shock-like protein CspG [Yersinia pestis PY-15]
gi|420625894|ref|ZP_15115696.1| cold shock-like protein CspG [Yersinia pestis PY-16]
gi|420631080|ref|ZP_15120389.1| cold shock-like protein CspG [Yersinia pestis PY-19]
gi|420639593|ref|ZP_15128020.1| cold shock-like protein CspG [Yersinia pestis PY-25]
gi|420645046|ref|ZP_15133007.1| cold shock-like protein CspG [Yersinia pestis PY-29]
gi|420650353|ref|ZP_15137788.1| cold shock-like protein CspG [Yersinia pestis PY-32]
gi|420655988|ref|ZP_15142860.1| cold shock-like protein CspG [Yersinia pestis PY-34]
gi|420661424|ref|ZP_15147712.1| cold shock-like protein CspG [Yersinia pestis PY-36]
gi|420666781|ref|ZP_15152543.1| cold shock-like protein CspG [Yersinia pestis PY-42]
gi|420671631|ref|ZP_15156966.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|420676972|ref|ZP_15161824.1| cold shock-like protein CspG [Yersinia pestis PY-46]
gi|420682537|ref|ZP_15166843.1| cold shock-like protein CspG [Yersinia pestis PY-47]
gi|420687942|ref|ZP_15171651.1| cold shock-like protein CspG [Yersinia pestis PY-48]
gi|420689630|ref|ZP_15173147.1| cold shock-like protein CspG [Yersinia pestis PY-52]
gi|420698936|ref|ZP_15181307.1| cold shock-like protein CspG [Yersinia pestis PY-53]
gi|420704805|ref|ZP_15185951.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|420710116|ref|ZP_15190704.1| cold shock-like protein CspG [Yersinia pestis PY-55]
gi|420715600|ref|ZP_15195563.1| cold shock-like protein CspG [Yersinia pestis PY-56]
gi|420721121|ref|ZP_15200289.1| cold shock-like protein CspG [Yersinia pestis PY-58]
gi|420726575|ref|ZP_15205101.1| cold shock-like protein CspG [Yersinia pestis PY-59]
gi|420732096|ref|ZP_15210066.1| cold shock-like protein CspG [Yersinia pestis PY-60]
gi|420737067|ref|ZP_15214558.1| cold shock-like protein CspG [Yersinia pestis PY-61]
gi|420742546|ref|ZP_15219482.1| cold shock-like protein CspG [Yersinia pestis PY-63]
gi|420748421|ref|ZP_15224423.1| cold shock-like protein CspG [Yersinia pestis PY-64]
gi|420753694|ref|ZP_15229159.1| cold shock-like protein CspG [Yersinia pestis PY-65]
gi|420759644|ref|ZP_15233927.1| cold shock-like protein CspG [Yersinia pestis PY-66]
gi|420766803|ref|ZP_15240304.1| cold shock-like protein CspG [Yersinia pestis PY-72]
gi|420775062|ref|ZP_15247738.1| cold shock-like protein CspG [Yersinia pestis PY-76]
gi|420776886|ref|ZP_15249357.1| cold shock-like protein CspG [Yersinia pestis PY-88]
gi|420786291|ref|ZP_15257578.1| cold shock-like protein CspG [Yersinia pestis PY-89]
gi|420791342|ref|ZP_15262119.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|420796911|ref|ZP_15267132.1| cold shock-like protein CspG [Yersinia pestis PY-91]
gi|420802008|ref|ZP_15271707.1| cold shock-like protein CspG [Yersinia pestis PY-92]
gi|420807349|ref|ZP_15276553.1| cold shock-like protein CspG [Yersinia pestis PY-93]
gi|420812750|ref|ZP_15281392.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|420818229|ref|ZP_15286359.1| cold shock-like protein CspG [Yersinia pestis PY-95]
gi|420823558|ref|ZP_15291123.1| cold shock-like protein CspG [Yersinia pestis PY-96]
gi|420828623|ref|ZP_15295686.1| cold shock-like protein CspG [Yersinia pestis PY-98]
gi|420834225|ref|ZP_15300743.1| cold shock-like protein CspG [Yersinia pestis PY-99]
gi|420835860|ref|ZP_15302224.1| cold shock-like protein CspG [Yersinia pestis PY-100]
gi|420841007|ref|ZP_15306885.1| cold shock-like protein CspG [Yersinia pestis PY-101]
gi|420846625|ref|ZP_15311962.1| cold shock-like protein CspG [Yersinia pestis PY-102]
gi|420855719|ref|ZP_15319814.1| cold shock-like protein CspG [Yersinia pestis PY-103]
gi|420860817|ref|ZP_15324310.1| cold shock-like protein CspG [Yersinia pestis PY-113]
gi|421765157|ref|ZP_16201944.1| cold shock-like protein [Yersinia pestis INS]
gi|2275140|emb|CAB10779.1| hypothetical protein [Yersinia pestis]
gi|108777335|gb|ABG19854.1| cold-shock DNA-binding protein family [Yersinia pestis Nepal516]
gi|108781560|gb|ABG15618.1| cold-shock DNA-binding protein family [Yersinia pestis Antiqua]
gi|115349264|emb|CAL22231.1| major cold shock protein Cspa2 [Yersinia pestis CO92]
gi|145209262|gb|ABP38669.1| cold-shock DNA-binding protein family [Yersinia pestis Pestoides F]
gi|149289056|gb|EDM39136.1| major cold shock protein Cspa2 [Yersinia pestis CA88-4125]
gi|152960448|gb|ABS47909.1| 'Cold-shock' DNA-binding domain [Yersinia pseudotuberculosis IP
31758]
gi|162354526|gb|ABX88474.1| cold shock DNA-binding domain protein [Yersinia pestis Angola]
gi|165914514|gb|EDR33128.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920482|gb|EDR37759.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165988853|gb|EDR41154.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166204619|gb|EDR49099.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166961443|gb|EDR57464.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167048565|gb|EDR59973.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055447|gb|EDR65240.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229678307|gb|EEO74412.1| major cold shock protein Cspa2 [Yersinia pestis Nepal516]
gi|229687370|gb|EEO79445.1| major cold shock protein Cspa2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695680|gb|EEO85727.1| major cold shock protein Cspa2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229705729|gb|EEO91738.1| major cold shock protein Cspa2 [Yersinia pestis Pestoides A]
gi|270337132|gb|EFA47909.1| transcriptional repressor activity CueR [Yersinia pestis KIM D27]
gi|320017194|gb|ADW00766.1| major cold shock protein Cspa2 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342853629|gb|AEL72182.1| cold shock-like protein [Yersinia pestis A1122]
gi|391421766|gb|EIQ84426.1| cold shock-like protein CspG [Yersinia pestis PY-01]
gi|391421939|gb|EIQ84578.1| cold shock-like protein CspG [Yersinia pestis PY-02]
gi|391422075|gb|EIQ84694.1| cold shock-like protein CspG [Yersinia pestis PY-03]
gi|391436851|gb|EIQ97770.1| cold shock-like protein CspG [Yersinia pestis PY-04]
gi|391441711|gb|EIR02178.1| cold shock-like protein CspG [Yersinia pestis PY-06]
gi|391453884|gb|EIR13147.1| cold shock-like protein CspG [Yersinia pestis PY-07]
gi|391454203|gb|EIR13436.1| cold shock-like protein CspG [Yersinia pestis PY-08]
gi|391456278|gb|EIR15320.1| cold shock-like protein CspG [Yersinia pestis PY-09]
gi|391469830|gb|EIR27565.1| cold shock-like protein CspG [Yersinia pestis PY-10]
gi|391470538|gb|EIR28197.1| cold shock-like protein CspG [Yersinia pestis PY-11]
gi|391472005|gb|EIR29510.1| cold shock-like protein CspG [Yersinia pestis PY-12]
gi|391485517|gb|EIR41650.1| cold shock-like protein CspG [Yersinia pestis PY-13]
gi|391487177|gb|EIR43140.1| cold shock-like protein CspG [Yersinia pestis PY-15]
gi|391487182|gb|EIR43143.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|391506692|gb|EIR60590.1| cold shock-like protein CspG [Yersinia pestis PY-25]
gi|391511352|gb|EIR64775.1| cold shock-like protein CspG [Yersinia pestis PY-16]
gi|391512606|gb|EIR65907.1| cold shock-like protein CspG [Yersinia pestis PY-19]
gi|391517641|gb|EIR70423.1| cold shock-like protein CspG [Yersinia pestis PY-29]
gi|391518832|gb|EIR71518.1| cold shock-like protein CspG [Yersinia pestis PY-34]
gi|391519687|gb|EIR72306.1| cold shock-like protein CspG [Yersinia pestis PY-32]
gi|391532141|gb|EIR83567.1| cold shock-like protein CspG [Yersinia pestis PY-36]
gi|391534983|gb|EIR86104.1| cold shock-like protein CspG [Yersinia pestis PY-42]
gi|391537444|gb|EIR88340.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|391550549|gb|EIS00154.1| cold shock-like protein CspG [Yersinia pestis PY-46]
gi|391550753|gb|EIS00334.1| cold shock-like protein CspG [Yersinia pestis PY-47]
gi|391551043|gb|EIS00593.1| cold shock-like protein CspG [Yersinia pestis PY-48]
gi|391566631|gb|EIS14599.1| cold shock-like protein CspG [Yersinia pestis PY-53]
gi|391570473|gb|EIS17932.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|391575187|gb|EIS21947.1| cold shock-like protein CspG [Yersinia pestis PY-52]
gi|391580138|gb|EIS26169.1| cold shock-like protein CspG [Yersinia pestis PY-55]
gi|391581834|gb|EIS27676.1| cold shock-like protein CspG [Yersinia pestis PY-56]
gi|391592300|gb|EIS36738.1| cold shock-like protein CspG [Yersinia pestis PY-58]
gi|391595710|gb|EIS39722.1| cold shock-like protein CspG [Yersinia pestis PY-60]
gi|391596524|gb|EIS40451.1| cold shock-like protein CspG [Yersinia pestis PY-59]
gi|391610262|gb|EIS52568.1| cold shock-like protein CspG [Yersinia pestis PY-61]
gi|391610576|gb|EIS52839.1| cold shock-like protein CspG [Yersinia pestis PY-63]
gi|391612303|gb|EIS54388.1| cold shock-like protein CspG [Yersinia pestis PY-64]
gi|391623544|gb|EIS64314.1| cold shock-like protein CspG [Yersinia pestis PY-65]
gi|391627007|gb|EIS67269.1| cold shock-like protein CspG [Yersinia pestis PY-66]
gi|391644361|gb|EIS82374.1| cold shock-like protein CspG [Yersinia pestis PY-72]
gi|391645950|gb|EIS83761.1| cold shock-like protein CspG [Yersinia pestis PY-76]
gi|391653582|gb|EIS90519.1| cold shock-like protein CspG [Yersinia pestis PY-89]
gi|391659021|gb|EIS95369.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|391661377|gb|EIS97426.1| cold shock-like protein CspG [Yersinia pestis PY-88]
gi|391666560|gb|EIT02007.1| cold shock-like protein CspG [Yersinia pestis PY-91]
gi|391675884|gb|EIT10357.1| cold shock-like protein CspG [Yersinia pestis PY-93]
gi|391676228|gb|EIT10657.1| cold shock-like protein CspG [Yersinia pestis PY-92]
gi|391676617|gb|EIT11006.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|391690097|gb|EIT23163.1| cold shock-like protein CspG [Yersinia pestis PY-95]
gi|391692354|gb|EIT25206.1| cold shock-like protein CspG [Yersinia pestis PY-96]
gi|391693898|gb|EIT26605.1| cold shock-like protein CspG [Yersinia pestis PY-98]
gi|391707373|gb|EIT38730.1| cold shock-like protein CspG [Yersinia pestis PY-99]
gi|391719349|gb|EIT49469.1| cold shock-like protein CspG [Yersinia pestis PY-100]
gi|391719659|gb|EIT49740.1| cold shock-like protein CspG [Yersinia pestis PY-101]
gi|391723493|gb|EIT53167.1| cold shock-like protein CspG [Yersinia pestis PY-103]
gi|391726612|gb|EIT55935.1| cold shock-like protein CspG [Yersinia pestis PY-113]
gi|391730484|gb|EIT59311.1| cold shock-like protein CspG [Yersinia pestis PY-102]
gi|411174063|gb|EKS44100.1| cold shock-like protein [Yersinia pestis INS]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPAAVNV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|123444001|ref|YP_001007971.1| major cold shock protein CspA1 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|123444002|ref|YP_001007972.1| major cold shock protein CspA1 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090962|emb|CAL13844.1| major cold shock protein CspA1 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090963|emb|CAL13845.1| major cold shock protein CspA1 [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 SGAKGPSAVNVV 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 SGAKG 61
>gi|389840631|ref|YP_006342715.1| cold shock-like protein CspA 2 [Cronobacter sakazakii ES15]
gi|417790920|ref|ZP_12438432.1| Cold shock-like protein cspC [Cronobacter sakazakii E899]
gi|424799970|ref|ZP_18225512.1| Cold shock protein CspC [Cronobacter sakazakii 696]
gi|429082682|ref|ZP_19145743.1| Cold shock protein CspC [Cronobacter condimenti 1330]
gi|429086995|ref|ZP_19149727.1| Cold shock protein CspC [Cronobacter universalis NCTC 9529]
gi|429091390|ref|ZP_19154062.1| Cold shock protein CspC [Cronobacter dublinensis 1210]
gi|429095960|ref|ZP_19158066.1| Cold shock protein CspC [Cronobacter dublinensis 582]
gi|429100935|ref|ZP_19162909.1| Cold shock protein CspC [Cronobacter turicensis 564]
gi|429105023|ref|ZP_19166892.1| Cold shock protein CspC [Cronobacter malonaticus 681]
gi|429110686|ref|ZP_19172456.1| Cold shock protein CspC [Cronobacter malonaticus 507]
gi|429118615|ref|ZP_19179370.1| Cold shock protein CspC [Cronobacter sakazakii 680]
gi|449307925|ref|YP_007440281.1| Cold shock-like protein cspC [Cronobacter sakazakii SP291]
gi|333955012|gb|EGL72802.1| Cold shock-like protein cspC [Cronobacter sakazakii E899]
gi|387851107|gb|AFJ99204.1| cold shock-like protein CspA 2 [Cronobacter sakazakii ES15]
gi|423235691|emb|CCK07382.1| Cold shock protein CspC [Cronobacter sakazakii 696]
gi|426282300|emb|CCJ84179.1| Cold shock protein CspC [Cronobacter dublinensis 582]
gi|426287584|emb|CCJ89022.1| Cold shock protein CspC [Cronobacter turicensis 564]
gi|426291746|emb|CCJ93005.1| Cold shock protein CspC [Cronobacter malonaticus 681]
gi|426311843|emb|CCJ98569.1| Cold shock protein CspC [Cronobacter malonaticus 507]
gi|426326869|emb|CCK10107.1| Cold shock protein CspC [Cronobacter sakazakii 680]
gi|426506798|emb|CCK14839.1| Cold shock protein CspC [Cronobacter universalis NCTC 9529]
gi|426548563|emb|CCJ71784.1| Cold shock protein CspC [Cronobacter condimenti 1330]
gi|426744002|emb|CCJ80175.1| Cold shock protein CspC [Cronobacter dublinensis 1210]
gi|449097958|gb|AGE85992.1| Cold shock-like protein cspC [Cronobacter sakazakii SP291]
Length = 69
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NV
Sbjct: 58 QKGPAAVNVV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|320540284|ref|ZP_08039936.1| putative stress protein, member of the CspA-family [Serratia
symbiotica str. Tucson]
gi|320029604|gb|EFW11631.1| putative stress protein, member of the CspA-family [Serratia
symbiotica str. Tucson]
Length = 69
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINV 100
KG A+NV
Sbjct: 58 QKGPSAVNV 66
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|238782953|ref|ZP_04626981.1| Cold shock-like protein cspI [Yersinia bercovieri ATCC 43970]
gi|332163162|ref|YP_004299739.1| cold shock-like protein cspG [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310172|ref|YP_006006228.1| cold shock protein CspG [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418242201|ref|ZP_12868716.1| cold shock-like protein cspG [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550741|ref|ZP_20506784.1| major cold shock protein CspA1 [Yersinia enterocolitica IP 10393]
gi|6073870|gb|AAB40923.2| major cold shock protein CSPA1 [Yersinia enterocolitica]
gi|238716156|gb|EEQ08140.1| Cold shock-like protein cspI [Yersinia bercovieri ATCC 43970]
gi|318603954|emb|CBY25452.1| cold shock protein CspG [Yersinia enterocolitica subsp. palearctica
Y11]
gi|325667392|gb|ADZ44036.1| cold shock-like protein cspG [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862837|emb|CBX72978.1| cold shock-like protein cspB [Yersinia enterocolitica W22703]
gi|351778338|gb|EHB20497.1| cold shock-like protein cspG [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431787840|emb|CCO69824.1| major cold shock protein CspA1 [Yersinia enterocolitica IP 10393]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGAKGPSAVNVV 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|429086185|ref|ZP_19148917.1| Cold shock protein CspG [Cronobacter universalis NCTC 9529]
gi|426505988|emb|CCK14029.1| Cold shock protein CspG [Cronobacter universalis NCTC 9529]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N ++TL EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNADKGFGFIAPSDGSKDVFVHFSAIQSDN----FRTLTEGQQVEFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGAKGPSAVNVV 68
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N ++TL EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNADKGFGFIAPSDGSKDVFVHFSAIQSDN----FRTLTEGQQVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|149695055|ref|XP_001504139.1| PREDICTED: protein lin-28 homolog A [Equus caballus]
Length = 205
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 6 SGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 58
+G A+A + P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEESQEDAAGPAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
VFVH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGK 123
Query: 119 KYNRRKAKANK 129
+R++K ++
Sbjct: 124 NLQKRRSKGDR 134
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 173 SGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 225
+G A+A + + P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEESQEDAAGPAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
VFVH ++ +++L EGE VEF + KG
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 99
>gi|260597574|ref|YP_003210145.1| Cold shock-like protein cspB [Cronobacter turicensis z3032]
gi|429100112|ref|ZP_19162086.1| Cold shock protein CspG [Cronobacter turicensis 564]
gi|260216751|emb|CBA30171.1| Cold shock-like protein cspB [Cronobacter turicensis z3032]
gi|426286761|emb|CCJ88199.1| Cold shock protein CspG [Cronobacter turicensis 564]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N ++TL EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNADKGFGFIAPTDGSKDVFVHFSAIQSDN----FRTLTEGQQVEFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGAKGPSAVNVV 68
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N ++TL EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNADKGFGFIAPTDGSKDVFVHFSAIQSDN----FRTLTEGQQVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|261211013|ref|ZP_05925303.1| cold shock protein CspA [Vibrio sp. RC341]
gi|260839988|gb|EEX66588.1| cold shock protein CspA [Vibrio sp. RC341]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ G+GFI + D+FVH K I + +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNETKGFGFITPDNGGADLFVHFKSIVSDG----FKTLAEGQKVAFNVE 56
Query: 90 QGDKGHEAINVT 101
QG+KG +A NVT
Sbjct: 57 QGNKGPQAANVT 68
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ G+GFI + D+FVH K I + +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNETKGFGFITPDNGGADLFVHFKSIVSDG----FKTLAEGQKVAFNVE 56
Query: 257 QGDKGNQ 263
QG+KG Q
Sbjct: 57 QGNKGPQ 63
>gi|420260192|ref|ZP_14762879.1| major cold shock protein Cspa1 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404512406|gb|EKA26254.1| major cold shock protein Cspa1 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPSAVNV 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|331695978|ref|YP_004332217.1| cold-shock DNA-binding domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326950667|gb|AEA24364.1| cold-shock DNA-binding domain protein [Pseudonocardia dioxanivorans
CB1190]
Length = 68
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGF+A DVFVH I+ N YK+L EG+ V FDI QG KG
Sbjct: 4 GTVKWFNSEKGYGFLAPDGGGADVFVHYSAIQVNG----YKSLDEGQRVSFDIEQGQKGP 59
Query: 96 EAINVT 101
+A VT
Sbjct: 60 QATKVT 65
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGF+A DVFVH I+ N YK+L EG+ V FDI QG KG
Sbjct: 4 GTVKWFNSEKGYGFLAPDGGGADVFVHYSAIQVNG----YKSLDEGQRVSFDIEQGQKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|238782952|ref|ZP_04626980.1| Cold shock-like protein cspI [Yersinia bercovieri ATCC 43970]
gi|238716155|gb|EEQ08139.1| Cold shock-like protein cspI [Yersinia bercovieri ATCC 43970]
Length = 70
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPADGSKDVFVHFSAIQSND----FKTLEEGQNVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NV
Sbjct: 57 NGAKGPAAANVV 68
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPADGSKDVFVHFSAIQSND----FKTLEEGQNVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|238756793|ref|ZP_04618027.1| Cold shock-like protein cspI [Yersinia ruckeri ATCC 29473]
gi|238704988|gb|EEP97471.1| Cold shock-like protein cspI [Yersinia ruckeri ATCC 29473]
Length = 75
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V ++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG++VEF
Sbjct: 4 VSMSNKMTGLVKWFDAGKGFGFITPTDGSKDVFVHFSAIQSND----FKTLDEGQSVEFS 59
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 60 IENGAKGPSAANV 72
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V ++ K+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG++VEF
Sbjct: 4 VSMSNKMTGLVKWFDAGKGFGFITPTDGSKDVFVHFSAIQSND----FKTLDEGQSVEFS 59
Query: 255 IMQGDKG 261
I G KG
Sbjct: 60 IENGAKG 66
>gi|319760574|ref|YP_004124512.1| cold shock-like protein cspC [Candidatus Blochmannia vafer str.
BVAF]
gi|318039288|gb|ADV33838.1| cold shock-like protein cspC [Candidatus Blochmannia vafer str.
BVAF]
Length = 69
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL+EG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPSDGSKDVFVHFSAIQGNG----FKTLSEGQNVEFEIQDGH 58
Query: 93 KGHEAINVT 101
KG A+NVT
Sbjct: 59 KGPSAVNVT 67
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL+EG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPSDGSKDVFVHFSAIQGNG----FKTLSEGQNVEFEIQDGH 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|224078196|ref|XP_002305502.1| predicted protein [Populus trichocarpa]
gi|222848466|gb|EEE86013.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ + G VKWFS + G+GFI+ ++D+FVH IK Y++L +GE VEF I
Sbjct: 1 MGERQTGKVKWFSDQKGFGFISPDDGSDDLFVHQSSIKSEG----YRSLGDGEEVEFVIE 56
Query: 90 QGDKGH-EAINVTGPDGRHVQG 110
D G +A++VT P G VQG
Sbjct: 57 NSDDGRTKAVDVTAPGGNPVQG 78
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ + G VKWFS + G+GFI+ ++D+FVH IK Y++L +GE VEF I
Sbjct: 1 MGERQTGKVKWFSDQKGFGFISPDDGSDDLFVHQSSIKSEG----YRSLGDGEEVEFVIE 56
Query: 257 QGDKG 261
D G
Sbjct: 57 NSDDG 61
>gi|21957922|gb|AAM84743.1|AE013720_7 cold shock protein [Yersinia pestis KIM10+]
gi|45435809|gb|AAS61366.1| putative cold shock protein [Yersinia pestis biovar Microtus str.
91001]
Length = 84
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
V L +K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+
Sbjct: 13 VSLMSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFE 68
Query: 88 IMQGDKGHEAINV 100
I G KG A NV
Sbjct: 69 ITNGAKGPSAANV 81
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
V L +K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+
Sbjct: 13 VSLMSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFE 68
Query: 255 IMQGDKG 261
I G KG
Sbjct: 69 ITNGAKG 75
>gi|242239458|ref|YP_002987639.1| cold shock-like protein CspC [Dickeya dadantii Ech703]
gi|242131515|gb|ACS85817.1| cold-shock DNA-binding domain protein [Dickeya dadantii Ech703]
Length = 69
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I+ +KTLAEG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGTG----FKTLAEGQNVEFEIQDGQ 58
Query: 93 KGHEAINVT 101
KG A+NVT
Sbjct: 59 KGPSAVNVT 67
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I+ +KTLAEG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGTG----FKTLAEGQNVEFEIQDGQ 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|429115929|ref|ZP_19176847.1| Cold shock protein CspC [Cronobacter sakazakii 701]
gi|426319058|emb|CCK02960.1| Cold shock protein CspC [Cronobacter sakazakii 701]
Length = 69
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQKVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NV
Sbjct: 58 QKGPAAVNVV 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQKVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|429090871|ref|ZP_19153573.1| Cold shock protein CspG [Cronobacter dublinensis 1210]
gi|429095760|ref|ZP_19157866.1| Cold shock protein CspG [Cronobacter dublinensis 582]
gi|426282100|emb|CCJ83979.1| Cold shock protein CspG [Cronobacter dublinensis 582]
gi|426744526|emb|CCJ79686.1| Cold shock protein CspG [Cronobacter dublinensis 1210]
Length = 70
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N Y++L EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNADKGFGFIAPADGSKDVFVHFSAIQGDN----YRSLTEGQQVEFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGAKGPSAVNVV 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A ++ G VKWF+ G+GFIA ++DVFVH I+ +N Y++L EG+ VEF +
Sbjct: 1 MANRMNGSVKWFNADKGFGFIAPADGSKDVFVHFSAIQGDN----YRSLTEGQQVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|157369432|ref|YP_001477421.1| cold shock protein CspE [Serratia proteamaculans 568]
gi|157321196|gb|ABV40293.1| cold-shock DNA-binding domain protein [Serratia proteamaculans 568]
Length = 69
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I QG
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFEITQG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I QG
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFEITQG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|423140576|ref|ZP_17128214.1| transcriptional repressor activity CueR [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379053130|gb|EHY71021.1| transcriptional repressor activity CueR [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 70
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N+ ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FRTLNENQEVEFSVE 56
Query: 90 QGDKGHEAINV 100
QG KG A+NV
Sbjct: 57 QGPKGPSAVNV 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N+ ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FRTLNENQEVEFSVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGPKG 61
>gi|326332603|ref|ZP_08198871.1| conserved domain protein [Nocardioidaceae bacterium Broad-1]
gi|325949604|gb|EGD41676.1| conserved domain protein [Nocardioidaceae bacterium Broad-1]
Length = 67
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFIA EDVFVH I+ N YK+L E + VEFD+ QG KG
Sbjct: 4 GTVKWFNADKGFGFIAQDGGGEDVFVHFSAIQSNG----YKSLDENQKVEFDVTQGPKGP 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAENV 64
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFIA EDVFVH I+ N YK+L E + VEFD+ QG KG
Sbjct: 4 GTVKWFNADKGFGFIAQDGGGEDVFVHFSAIQSNG----YKSLDENQKVEFDVTQGPKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|302824155|ref|XP_002993723.1| hypothetical protein SELMODRAFT_187582 [Selaginella moellendorffii]
gi|300138447|gb|EFJ05215.1| hypothetical protein SELMODRAFT_187582 [Selaginella moellendorffii]
Length = 165
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
A K G VKWF+ G+GFI ED+FVH I + +++L +GE VEF I +
Sbjct: 5 AEKKSGKVKWFNSAKGFGFITPDDGGEDLFVHQSSIHADG----FRSLKDGEAVEFTIDR 60
Query: 91 GDKGH-EAINVTGPDGRHVQGS 111
+ G +A++VTGP+G VQG+
Sbjct: 61 SEDGRTKALDVTGPEGSFVQGA 82
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
A K G VKWF+ G+GFI ED+FVH I + +++L +GE VEF I +
Sbjct: 5 AEKKSGKVKWFNSAKGFGFITPDDGGEDLFVHQSSIHADG----FRSLKDGEAVEFTIDR 60
Query: 258 GDKG 261
+ G
Sbjct: 61 SEDG 64
>gi|146312144|ref|YP_001177218.1| cold-shock DNA-binding protein family protein [Enterobacter sp.
638]
gi|145319020|gb|ABP61167.1| cold-shock DNA-binding protein family [Enterobacter sp. 638]
Length = 70
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ + G+GFI ++DVFVH I+ ++ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSEKGFGFITPADGSKDVFVHFSAIQSSD----YKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAANVT 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ + G+GFI ++DVFVH I+ ++ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSEKGFGFITPADGSKDVFVHFSAIQSSD----YKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|42391858|dbj|BAD08701.1| cold shock domain protein 3 [Triticum aestivum]
Length = 231
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ +V G VKWF+V G+GFI+ ED+FVH IK + Y++L E + VEF+I+
Sbjct: 1 MGERVKGTVKWFNVTKGFGFISPDDGGEDLFVHQSAIKSDG----YRSLNENDAVEFEII 56
Query: 90 QGDKGH-EAINVTGPDG 105
GD G +A +VT P G
Sbjct: 57 TGDDGRTKASDVTAPGG 73
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ +V G VKWF+V G+GFI+ ED+FVH IK + Y++L E + VEF+I+
Sbjct: 1 MGERVKGTVKWFNVTKGFGFISPDDGGEDLFVHQSAIKSDG----YRSLNENDAVEFEII 56
Query: 257 QGDKG 261
GD G
Sbjct: 57 TGDDG 61
>gi|334122117|ref|ZP_08496159.1| CspA family transcriptional regulator [Enterobacter hormaechei ATCC
49162]
gi|333392425|gb|EGK63528.1| CspA family transcriptional regulator [Enterobacter hormaechei ATCC
49162]
Length = 72
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+++K+ G+VKW+ G+GFI+ ++DVFVH ++ N +KTL EG+ VEF I+
Sbjct: 1 MSSKILGLVKWYKEDKGFGFISPVDGSKDVFVHFSALQGEN----FKTLFEGQKVEFIIV 56
Query: 90 QGDKGHEAINVT 101
GDKG A NVT
Sbjct: 57 SGDKGPAAANVT 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+++K+ G+VKW+ G+GFI+ ++DVFVH ++ N +KTL EG+ VEF I+
Sbjct: 1 MSSKILGLVKWYKEDKGFGFISPVDGSKDVFVHFSALQGEN----FKTLFEGQKVEFIIV 56
Query: 257 QGDKG 261
GDKG
Sbjct: 57 SGDKG 61
>gi|386284401|ref|ZP_10061623.1| cold shock protein [Sulfurovum sp. AR]
gi|385344686|gb|EIF51400.1| cold shock protein [Sulfurovum sp. AR]
Length = 72
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+AT V G VKWF+ + GYGFI + +DVFVH +++ N ++ TL EG+ V F+I
Sbjct: 1 MATLVNGTVKWFNDEKGYGFIQQENGGDDVFVHFRQVNNENGGRV--TLNEGQAVTFEIG 58
Query: 90 QGDKGHEAINVTG 102
+G KG +A NVT
Sbjct: 59 EGQKGPQAENVTA 71
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+AT V G VKWF+ + GYGFI + +DVFVH +++ N ++ TL EG+ V F+I
Sbjct: 1 MATLVNGTVKWFNDEKGYGFIQQENGGDDVFVHFRQVNNENGGRV--TLNEGQAVTFEIG 58
Query: 257 QGDKGNQ 263
+G KG Q
Sbjct: 59 EGQKGPQ 65
>gi|114561918|ref|YP_749431.1| cold-shock DNA-binding domain-containing protein [Shewanella
frigidimarina NCIMB 400]
gi|114333211|gb|ABI70593.1| cold-shock DNA-binding protein family [Shewanella frigidimarina
NCIMB 400]
gi|149675718|dbj|BAF64739.1| cold shock protein [Shewanella livingstonensis]
Length = 70
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ G+GFI + DVFVH + I +KTLAEG+ V FD+
Sbjct: 1 MSNKTTGLVKWFNEDKGFGFITPDNGGADVFVHFRSITSEG----FKTLAEGQKVSFDVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGPQAANV 67
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ G+GFI + DVFVH + I +KTLAEG+ V FD+
Sbjct: 1 MSNKTTGLVKWFNEDKGFGFITPDNGGADVFVHFRSITSEG----FKTLAEGQKVSFDVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|262165515|ref|ZP_06033252.1| cold shock protein CspA [Vibrio mimicus VM223]
gi|262402390|ref|ZP_06078951.1| cold shock protein CspA [Vibrio sp. RC586]
gi|449145212|ref|ZP_21776021.1| cold-shock protein [Vibrio mimicus CAIM 602]
gi|262025231|gb|EEY43899.1| cold shock protein CspA [Vibrio mimicus VM223]
gi|262351172|gb|EEZ00305.1| cold shock protein CspA [Vibrio sp. RC586]
gi|449079248|gb|EMB50173.1| cold-shock protein [Vibrio mimicus CAIM 602]
Length = 70
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ G+GFI + D+FVH K I + +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNETKGFGFITPDNGGADLFVHFKSIVSDG----FKTLAEGQKVAFNVE 56
Query: 90 QGDKGHEAINVT 101
QG+KG +A NVT
Sbjct: 57 QGNKGPQAANVT 68
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ G+GFI + D+FVH K I + +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNETKGFGFITPDNGGADLFVHFKSIVSDG----FKTLAEGQKVAFNVE 56
Query: 257 QGDKGNQ 263
QG+KG Q
Sbjct: 57 QGNKGPQ 63
>gi|390952731|ref|YP_006416490.1| cold shock protein [Thiocystis violascens DSM 198]
gi|390429300|gb|AFL76365.1| cold shock protein [Thiocystis violascens DSM 198]
Length = 68
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ GVVKWF+ GYGF+ +EDVFVH I + YKTL EG+ VEF++ QG K
Sbjct: 2 ITGVVKWFNNAKGYGFVQPEGRDEDVFVHFSSIDMDG----YKTLREGQRVEFELSQGPK 57
Query: 94 GHEAINV 100
G A NV
Sbjct: 58 GLHAANV 64
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ GVVKWF+ GYGF+ +EDVFVH I + YKTL EG+ VEF++ QG K
Sbjct: 2 ITGVVKWFNNAKGYGFVQPEGRDEDVFVHFSSIDMDG----YKTLREGQRVEFELSQGPK 57
Query: 261 G 261
G
Sbjct: 58 G 58
>gi|329296326|ref|ZP_08253662.1| Cold shock-like protein cspC [Plautia stali symbiont]
Length = 69
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLVEGQRVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLVEGQRVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|329295571|ref|ZP_08252907.1| cold shock protein CspE [Plautia stali symbiont]
Length = 69
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITDG 57
Query: 92 DKGHEAINVT 101
KG A NVT
Sbjct: 58 AKGPSAANVT 67
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITDG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|51597878|ref|YP_072069.1| cold-shock protein CspA [Yersinia pseudotuberculosis IP 32953]
gi|186897074|ref|YP_001874186.1| cold-shock DNA-binding domain-containing protein [Yersinia
pseudotuberculosis PB1/+]
gi|51591160|emb|CAH22825.1| major cold shock protein Cspa2 [Yersinia pseudotuberculosis IP
32953]
gi|186700100|gb|ACC90729.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
PB1/+]
Length = 70
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI +DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGGKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPAAVNV 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI +DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPADGGKDVFVHFSAIQSND----FKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|417324921|ref|ZP_12111045.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353577635|gb|EHC39736.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
Length = 131
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINVT 101
KG A NVT
Sbjct: 58 AKGPSAANVT 67
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|33519902|ref|NP_878734.1| cold shock-like protein CspC [Candidatus Blochmannia floridanus]
gi|33504247|emb|CAD83510.1| cold shock-like protein CspC [Candidatus Blochmannia floridanus]
Length = 69
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL+EG+ VEF++ G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLSEGQNVEFEVQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 HKGPSAVNVT 67
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL+EG+ VEF++ G
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLSEGQNVEFEVQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 HKG 60
>gi|270264889|ref|ZP_06193153.1| Cold shock-like protein CspJ [Serratia odorifera 4Rx13]
gi|333928900|ref|YP_004502479.1| cold-shock DNA-binding domain-containing protein [Serratia sp.
AS12]
gi|333933853|ref|YP_004507431.1| cold-shock DNA-binding domain-containing protein [Serratia
plymuthica AS9]
gi|386330723|ref|YP_006026893.1| cold-shock protein [Serratia sp. AS13]
gi|386823895|ref|ZP_10111035.1| cold-shock DNA-binding domain-containing protein [Serratia
plymuthica PRI-2C]
gi|421785282|ref|ZP_16221713.1| cold shock-like protein CspJ [Serratia plymuthica A30]
gi|270041187|gb|EFA14287.1| Cold shock-like protein CspJ [Serratia odorifera 4Rx13]
gi|333475460|gb|AEF47170.1| cold-shock DNA-binding domain protein [Serratia plymuthica AS9]
gi|333492960|gb|AEF52122.1| cold-shock DNA-binding domain protein [Serratia sp. AS12]
gi|333963056|gb|AEG29829.1| cold-shock DNA-binding domain protein [Serratia sp. AS13]
gi|386379135|gb|EIJ19932.1| cold-shock DNA-binding domain-containing protein [Serratia
plymuthica PRI-2C]
gi|407752546|gb|EKF62698.1| cold shock-like protein CspJ [Serratia plymuthica A30]
Length = 70
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++TK+ G+VKWF+ G+GFI ++DVFVH I+ ++ +KTL EG+ VEF +
Sbjct: 1 MSTKMTGLVKWFNADKGFGFITPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSVE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 SGAKGPSAVNV 67
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++TK+ G+VKWF+ G+GFI ++DVFVH I+ ++ +KTL EG+ VEF +
Sbjct: 1 MSTKMTGLVKWFNADKGFGFITPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 SGAKG 61
>gi|16759589|ref|NP_455206.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16764006|ref|NP_459621.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29142638|ref|NP_805980.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414236|ref|YP_151311.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|146310817|ref|YP_001175891.1| cold shock protein CspE [Enterobacter sp. 638]
gi|161615160|ref|YP_001589125.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|162139604|ref|YP_215645.2| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167990632|ref|ZP_02571732.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|194444501|ref|YP_002039870.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448211|ref|YP_002044662.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472567|ref|ZP_03078551.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735055|ref|YP_002113746.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195873911|ref|ZP_02699682.2| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197251616|ref|YP_002145603.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197262485|ref|ZP_03162559.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197300846|ref|ZP_02661676.2| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197363159|ref|YP_002142796.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198244715|ref|YP_002214617.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200390458|ref|ZP_03217069.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204930521|ref|ZP_03221451.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205351917|ref|YP_002225718.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205357082|ref|ZP_02344593.2| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205358472|ref|ZP_02656696.2| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205358940|ref|ZP_02665405.2| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205359626|ref|ZP_02830749.2| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205360370|ref|ZP_02682831.2| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|213053415|ref|ZP_03346293.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425108|ref|ZP_03357858.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213580429|ref|ZP_03362255.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213648627|ref|ZP_03378680.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213857366|ref|ZP_03384337.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224582464|ref|YP_002636262.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911579|ref|ZP_04655416.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289809995|ref|ZP_06540624.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|311280471|ref|YP_003942702.1| cold-shock DNA-binding domain-containing protein [Enterobacter
cloacae SCF1]
gi|365848533|ref|ZP_09389009.1| cold shock-like protein CspE [Yokenella regensburgei ATCC 43003]
gi|374978656|ref|ZP_09719998.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375000392|ref|ZP_09724732.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375113547|ref|ZP_09758717.1| RNA chaperone, negative regulator of cspA transcription [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
gi|375118105|ref|ZP_09763272.1| RNA chaperone, negative regulator of cspA transcription [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|375122706|ref|ZP_09767870.1| cold shock-like protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|378444123|ref|YP_005231755.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378448981|ref|YP_005236340.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378955988|ref|YP_005213475.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378960405|ref|YP_005217891.1| cold-shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|378983232|ref|YP_005246387.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378988027|ref|YP_005251191.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379699847|ref|YP_005241575.1| cold shock-like protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383495429|ref|YP_005396118.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386590557|ref|YP_006086957.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409249070|ref|YP_006884907.1| Cold shock-like protein cspE CSP-E [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416426827|ref|ZP_11693229.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416428762|ref|ZP_11694051.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416439783|ref|ZP_11700423.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416444379|ref|ZP_11703612.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416453586|ref|ZP_11709660.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416458749|ref|ZP_11713268.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416466867|ref|ZP_11717144.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416475969|ref|ZP_11720881.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416486516|ref|ZP_11725113.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416501776|ref|ZP_11732346.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416509199|ref|ZP_11736439.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416522428|ref|ZP_11740524.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416529489|ref|ZP_11744382.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416538577|ref|ZP_11749481.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416544938|ref|ZP_11753099.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416554613|ref|ZP_11758344.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416563182|ref|ZP_11762708.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416571830|ref|ZP_11766991.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416576849|ref|ZP_11769431.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416584241|ref|ZP_11773962.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416594907|ref|ZP_11780721.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416601567|ref|ZP_11785112.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416605915|ref|ZP_11787347.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416614559|ref|ZP_11792811.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416621686|ref|ZP_11796507.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416632007|ref|ZP_11801337.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416643715|ref|ZP_11806201.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416648663|ref|ZP_11809308.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416661494|ref|ZP_11815546.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416670761|ref|ZP_11820250.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416678136|ref|ZP_11822532.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416695275|ref|ZP_11827619.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416705614|ref|ZP_11831023.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416713395|ref|ZP_11837037.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416719273|ref|ZP_11841129.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416725615|ref|ZP_11845896.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416730776|ref|ZP_11848789.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416740972|ref|ZP_11854803.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416743070|ref|ZP_11855995.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416756209|ref|ZP_11862489.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416764717|ref|ZP_11868248.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416766633|ref|ZP_11869249.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|417332070|ref|ZP_12116107.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|417340026|ref|ZP_12121449.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417356348|ref|ZP_12131936.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417364132|ref|ZP_12137156.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417371606|ref|ZP_12142145.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417380025|ref|ZP_12147799.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417388931|ref|ZP_12152904.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417409169|ref|ZP_12158053.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|417452623|ref|ZP_12163241.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417473203|ref|ZP_12168679.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417506685|ref|ZP_12174378.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|417516727|ref|ZP_12179564.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417526907|ref|ZP_12184755.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|417537545|ref|ZP_12190414.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|418484748|ref|ZP_13053739.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418492435|ref|ZP_13058929.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493380|ref|ZP_13059847.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418498262|ref|ZP_13064677.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418504555|ref|ZP_13070913.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418508173|ref|ZP_13074478.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418511833|ref|ZP_13078082.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|418525775|ref|ZP_13091755.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418763024|ref|ZP_13319148.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418766554|ref|ZP_13322626.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418771729|ref|ZP_13327735.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418775020|ref|ZP_13330981.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418781027|ref|ZP_13336912.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784489|ref|ZP_13340326.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418787994|ref|ZP_13343792.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418793157|ref|ZP_13348891.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418799379|ref|ZP_13355045.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418804910|ref|ZP_13360514.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418807777|ref|ZP_13363335.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418812317|ref|ZP_13367841.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815675|ref|ZP_13371176.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418821145|ref|ZP_13376570.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418827091|ref|ZP_13382252.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418831953|ref|ZP_13386903.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418835957|ref|ZP_13390848.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418838940|ref|ZP_13393782.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418844217|ref|ZP_13399009.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418849140|ref|ZP_13403875.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418853930|ref|ZP_13408614.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418860973|ref|ZP_13415546.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418864429|ref|ZP_13418958.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418866541|ref|ZP_13421004.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419727788|ref|ZP_14254756.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419734091|ref|ZP_14260986.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419738014|ref|ZP_14264782.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419746014|ref|ZP_14272624.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419747086|ref|ZP_14273639.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419790389|ref|ZP_14316061.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419793794|ref|ZP_14319410.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421357588|ref|ZP_15807896.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421365418|ref|ZP_15815640.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421368807|ref|ZP_15818991.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421372256|ref|ZP_15822405.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375866|ref|ZP_15825975.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421380440|ref|ZP_15830502.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421385887|ref|ZP_15835903.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421392303|ref|ZP_15842260.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421396183|ref|ZP_15846115.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421398838|ref|ZP_15848743.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421404977|ref|ZP_15854812.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421407580|ref|ZP_15857387.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421411922|ref|ZP_15861685.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419268|ref|ZP_15868960.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421424056|ref|ZP_15873707.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425811|ref|ZP_15875446.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421430157|ref|ZP_15879751.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421436986|ref|ZP_15886512.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421439358|ref|ZP_15888849.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446034|ref|ZP_15895455.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421451015|ref|ZP_15900381.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421570225|ref|ZP_16015918.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421577272|ref|ZP_16022860.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421581862|ref|ZP_16027403.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421585336|ref|ZP_16030835.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421887629|ref|ZP_16318779.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422024763|ref|ZP_16371240.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422029795|ref|ZP_16376047.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|423139096|ref|ZP_17126734.1| cold shock protein CspE [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|427546260|ref|ZP_18926559.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427562519|ref|ZP_18931321.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427581349|ref|ZP_18936145.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427603269|ref|ZP_18940919.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427627909|ref|ZP_18945829.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427651297|ref|ZP_18950584.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427660014|ref|ZP_18955545.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427665121|ref|ZP_18960288.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427711042|ref|ZP_18965253.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436636950|ref|ZP_20515933.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436745057|ref|ZP_20519867.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436797012|ref|ZP_20522958.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436810777|ref|ZP_20529815.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436813477|ref|ZP_20531665.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436831202|ref|ZP_20535870.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436849959|ref|ZP_20541096.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436856371|ref|ZP_20545476.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436863356|ref|ZP_20549899.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436871833|ref|ZP_20555007.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436878985|ref|ZP_20559404.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436887100|ref|ZP_20563506.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436894234|ref|ZP_20567712.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436904360|ref|ZP_20574377.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436910164|ref|ZP_20576749.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436918416|ref|ZP_20581587.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436925364|ref|ZP_20585796.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436934456|ref|ZP_20590460.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436941116|ref|ZP_20594676.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436949106|ref|ZP_20599120.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436959843|ref|ZP_20604040.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436974942|ref|ZP_20611218.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436987369|ref|ZP_20616013.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436999906|ref|ZP_20620479.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437007273|ref|ZP_20623221.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437017979|ref|ZP_20626471.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437035735|ref|ZP_20633661.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437046415|ref|ZP_20638231.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437049166|ref|ZP_20639786.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437057021|ref|ZP_20644389.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437065473|ref|ZP_20649158.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437078748|ref|ZP_20656242.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437081772|ref|ZP_20657847.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437089796|ref|ZP_20662368.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437117339|ref|ZP_20669959.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437122369|ref|ZP_20672211.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437132469|ref|ZP_20677919.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437137575|ref|ZP_20680370.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437148888|ref|ZP_20687761.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437152154|ref|ZP_20689825.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437161101|ref|ZP_20695174.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437172958|ref|ZP_20701481.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437175271|ref|ZP_20702734.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437188423|ref|ZP_20710427.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437235000|ref|ZP_20713759.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437259883|ref|ZP_20717403.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437272894|ref|ZP_20724644.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437279264|ref|ZP_20727601.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437293657|ref|ZP_20732191.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437306834|ref|ZP_20734476.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437323739|ref|ZP_20739473.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437338243|ref|ZP_20743549.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437359883|ref|ZP_20748141.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437421685|ref|ZP_20754974.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437454047|ref|ZP_20759891.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437469830|ref|ZP_20764845.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437485453|ref|ZP_20769565.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437498870|ref|ZP_20773679.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437501896|ref|ZP_20774432.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437528765|ref|ZP_20780218.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437557956|ref|ZP_20785245.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437578118|ref|ZP_20791365.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437588483|ref|ZP_20793948.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437602189|ref|ZP_20798196.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437625534|ref|ZP_20805619.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437626895|ref|ZP_20805811.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437663489|ref|ZP_20814005.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437670753|ref|ZP_20815763.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437694614|ref|ZP_20821689.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437702721|ref|ZP_20824242.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437735121|ref|ZP_20832395.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437766470|ref|ZP_20835157.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437801578|ref|ZP_20838176.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437838574|ref|ZP_20846009.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|437867168|ref|ZP_20848191.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|438050829|ref|ZP_20856207.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|438092193|ref|ZP_20861245.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438105607|ref|ZP_20866225.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438112840|ref|ZP_20869329.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|438144472|ref|ZP_20875470.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|440762147|ref|ZP_20941212.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440768894|ref|ZP_20947857.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440772314|ref|ZP_20951219.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|445136606|ref|ZP_21383470.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|445140098|ref|ZP_21384750.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445149353|ref|ZP_21389123.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445170074|ref|ZP_21395560.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445215293|ref|ZP_21401855.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445227203|ref|ZP_21404210.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445263530|ref|ZP_21409936.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445324687|ref|ZP_21412250.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445343350|ref|ZP_21416819.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445354428|ref|ZP_21421327.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|452121139|ref|YP_007471387.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|25296131|pir||AH0579 cold shock-like protein cspE [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16419141|gb|AAL19580.1| RNA chaperone, negative regulator of cspA transcription [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16501881|emb|CAD05106.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138269|gb|AAO69840.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128493|gb|AAV77999.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|145317693|gb|ABP59840.1| cold shock protein E (CspE) [Enterobacter sp. 638]
gi|161364524|gb|ABX68292.1| hypothetical protein SPAB_02928 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403164|gb|ACF63386.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194406515|gb|ACF66734.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194458931|gb|EDX47770.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194710557|gb|ACF89778.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631943|gb|EDX50463.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094636|emb|CAR60158.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197215319|gb|ACH52716.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197240740|gb|EDY23360.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197290243|gb|EDY29599.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197939231|gb|ACH76564.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602903|gb|EDZ01449.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320455|gb|EDZ05658.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205271698|emb|CAR36529.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324288|gb|EDZ12127.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205330839|gb|EDZ17603.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205334064|gb|EDZ20828.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205340419|gb|EDZ27183.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205344148|gb|EDZ30912.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349743|gb|EDZ36374.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|224466991|gb|ACN44821.1| cold shock protein E [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261245902|emb|CBG23703.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992359|gb|ACY87244.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|308749666|gb|ADO49418.1| cold-shock DNA-binding domain protein [Enterobacter cloacae SCF1]
gi|312911660|dbj|BAJ35634.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320084898|emb|CBY94688.1| Cold shock-like protein cspE CSP-E [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321226208|gb|EFX51259.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613239|gb|EFY10182.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621307|gb|EFY18164.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623727|gb|EFY20565.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628999|gb|EFY25778.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631721|gb|EFY28475.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637543|gb|EFY34245.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641883|gb|EFY38513.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646727|gb|EFY43233.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651428|gb|EFY47808.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653121|gb|EFY49455.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658841|gb|EFY55096.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664889|gb|EFY61082.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668891|gb|EFY65043.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670603|gb|EFY66736.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675344|gb|EFY71420.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682185|gb|EFY78210.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684985|gb|EFY80982.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322713693|gb|EFZ05264.1| RNA chaperone, negative regulator of cspA transcription [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
gi|323128946|gb|ADX16376.1| cold shock-like protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|323193956|gb|EFZ79158.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323197952|gb|EFZ83074.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202001|gb|EFZ87061.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323210399|gb|EFZ95290.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214339|gb|EFZ99090.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221490|gb|EGA05904.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225534|gb|EGA09764.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231092|gb|EGA15208.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323234076|gb|EGA18165.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238229|gb|EGA22287.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242537|gb|EGA26561.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323248486|gb|EGA32420.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251298|gb|EGA35170.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259226|gb|EGA42869.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261634|gb|EGA45209.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264816|gb|EGA48317.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272347|gb|EGA55754.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622372|gb|EGE28717.1| RNA chaperone, negative regulator of cspA transcription [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|326626956|gb|EGE33299.1| cold shock-like protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|332987574|gb|AEF06557.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353075080|gb|EHB40840.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353583231|gb|EHC43647.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353596539|gb|EHC53503.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353598270|gb|EHC54756.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353607637|gb|EHC61458.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353617548|gb|EHC68500.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353623797|gb|EHC72991.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353627200|gb|EHC75562.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353635934|gb|EHC82110.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353650541|gb|EHC92873.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353651767|gb|EHC93776.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353653574|gb|EHC95078.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353668285|gb|EHD05515.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353669066|gb|EHD06079.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357206599|gb|AET54645.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357959637|gb|EHJ83783.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|363551390|gb|EHL35708.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363551947|gb|EHL36255.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363552364|gb|EHL36655.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363561016|gb|EHL45146.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363561482|gb|EHL45599.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363572070|gb|EHL55965.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363573764|gb|EHL57640.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|364570837|gb|EHM48440.1| cold shock-like protein CspE [Yokenella regensburgei ATCC 43003]
gi|366057297|gb|EHN21600.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366057776|gb|EHN22076.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366064986|gb|EHN29182.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366071397|gb|EHN35497.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366074039|gb|EHN38103.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366080110|gb|EHN44088.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366084418|gb|EHN48328.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366829657|gb|EHN56533.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372206544|gb|EHP20048.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|374354277|gb|AEZ46038.1| Cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|379051650|gb|EHY69541.1| cold shock protein CspE [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379982781|emb|CCF91052.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380462250|gb|AFD57653.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381299278|gb|EIC40352.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381301370|gb|EIC42426.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381303745|gb|EIC44767.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381304662|gb|EIC45637.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381320289|gb|EIC60948.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383797601|gb|AFH44683.1| Cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392613467|gb|EIW95923.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392615884|gb|EIW98319.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392733304|gb|EIZ90506.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392734268|gb|EIZ91450.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392736565|gb|EIZ93727.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392747754|gb|EJA04745.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392750220|gb|EJA07196.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392754020|gb|EJA10939.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392763697|gb|EJA20503.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392764452|gb|EJA21251.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392765432|gb|EJA22219.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392769939|gb|EJA26668.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392777057|gb|EJA33743.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392779040|gb|EJA35711.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392790740|gb|EJA47233.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392792127|gb|EJA48595.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392798850|gb|EJA55121.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392801526|gb|EJA57750.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392803232|gb|EJA59433.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392814766|gb|EJA70717.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392815037|gb|EJA70981.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392822487|gb|EJA78299.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392825437|gb|EJA81177.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392825616|gb|EJA81355.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392830710|gb|EJA86357.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392840451|gb|EJA95987.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|395980929|gb|EJH90152.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395983102|gb|EJH92295.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989825|gb|EJH98957.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395999906|gb|EJI08921.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396003093|gb|EJI12081.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396003489|gb|EJI12476.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396007864|gb|EJI16799.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396011227|gb|EJI20138.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396015370|gb|EJI24252.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396024288|gb|EJI33074.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396029512|gb|EJI38248.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396030628|gb|EJI39362.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396035408|gb|EJI44080.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396036104|gb|EJI44775.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396044170|gb|EJI52767.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396052306|gb|EJI60814.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396057082|gb|EJI65555.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396057474|gb|EJI65946.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396063770|gb|EJI72158.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396064469|gb|EJI72856.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396071564|gb|EJI79889.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|402515299|gb|EJW22713.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402515860|gb|EJW23273.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402525382|gb|EJW32672.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402530233|gb|EJW37455.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414023132|gb|EKT06573.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414023487|gb|EKT06921.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414024996|gb|EKT08344.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414036948|gb|EKT19750.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414037997|gb|EKT20729.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414041856|gb|EKT24409.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414051453|gb|EKT33552.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414052869|gb|EKT34893.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414056924|gb|EKT38703.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414061557|gb|EKT42952.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414067057|gb|EKT47484.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|434939199|gb|ELL46060.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434958045|gb|ELL51628.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434961084|gb|ELL54402.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434965269|gb|ELL58232.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434972830|gb|ELL65222.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|434974985|gb|ELL67295.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434982159|gb|ELL73982.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434988536|gb|ELL80135.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434991804|gb|ELL83292.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434997883|gb|ELL89122.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435001048|gb|ELL92170.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435007661|gb|ELL98514.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435011632|gb|ELM02352.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435016882|gb|ELM07390.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435018048|gb|ELM08523.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435028537|gb|ELM18616.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435031148|gb|ELM21137.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435039757|gb|ELM29526.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435041596|gb|ELM31338.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435044947|gb|ELM34592.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435049893|gb|ELM39398.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435053804|gb|ELM43240.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435054508|gb|ELM43943.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435059950|gb|ELM49225.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435060447|gb|ELM49717.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435069185|gb|ELM58188.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435075102|gb|ELM63925.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435077885|gb|ELM66629.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435081571|gb|ELM70212.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435096539|gb|ELM84811.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435096704|gb|ELM84966.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435100121|gb|ELM88312.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435101104|gb|ELM89258.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435110940|gb|ELM98845.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435113711|gb|ELN01557.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435114814|gb|ELN02604.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435122016|gb|ELN09538.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435123195|gb|ELN10688.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435130697|gb|ELN17925.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435134209|gb|ELN21337.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435143627|gb|ELN30493.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435144035|gb|ELN30889.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435146614|gb|ELN33407.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435156343|gb|ELN42845.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435156929|gb|ELN43396.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435165271|gb|ELN51331.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435168226|gb|ELN54079.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435171420|gb|ELN57056.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435179942|gb|ELN65058.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435186822|gb|ELN71635.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435190714|gb|ELN75291.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435194790|gb|ELN79218.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435196240|gb|ELN80583.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435200501|gb|ELN84486.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435207836|gb|ELN91267.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435210953|gb|ELN94173.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435214715|gb|ELN97463.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435216628|gb|ELN99103.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435223793|gb|ELO05777.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435238391|gb|ELO19037.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435240108|gb|ELO20528.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435242053|gb|ELO22365.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435246320|gb|ELO26338.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435253353|gb|ELO32841.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435257999|gb|ELO37276.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435259877|gb|ELO39090.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435266352|gb|ELO45111.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435278194|gb|ELO56065.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435280959|gb|ELO58644.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435286201|gb|ELO63531.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435286391|gb|ELO63667.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435294152|gb|ELO70798.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435298247|gb|ELO74485.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435303979|gb|ELO79794.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435307692|gb|ELO82785.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435315495|gb|ELO88738.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435318032|gb|ELO91020.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435321296|gb|ELO93711.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435329955|gb|ELP01247.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|435335498|gb|ELP05719.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|436416058|gb|ELP13970.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436418798|gb|ELP16679.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436424096|gb|ELP21884.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|444844953|gb|ELX70175.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444852799|gb|ELX77874.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444858007|gb|ELX83000.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444859188|gb|ELX84141.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444862710|gb|ELX87552.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444867180|gb|ELX91880.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444881154|gb|ELY05198.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444881918|gb|ELY05918.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444887518|gb|ELY11211.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444888447|gb|ELY12021.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|451910143|gb|AGF81949.1| cold shock protein CspE [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 69
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINVT 101
KG A NVT
Sbjct: 58 AKGPSAANVT 67
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|358058755|dbj|GAA95718.1| hypothetical protein E5Q_02375 [Mixia osmundae IAM 14324]
Length = 405
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 33 KVCGVVKWFSVKSGYGFI--ATPS--SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
K GV K+F+ + G+GFI + P ++VFVH I + +K+LAEGE VE+++
Sbjct: 85 KRVGVCKFFNTQKGFGFINDSRPEELGGQEVFVHYTAIHG---KGGFKSLAEGEEVEYEV 141
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKY 120
G KG A NVTGP GR V G Q +P++
Sbjct: 142 NAGQKGFTAANVTGPGGRPVLGDQKPKLRPQH 173
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 200 KVCGVVKWFSVKSGYGFI--ATPS--SNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
K GV K+F+ + G+GFI + P ++VFVH I + +K+LAEGE VE+++
Sbjct: 85 KRVGVCKFFNTQKGFGFINDSRPEELGGQEVFVHYTAIHG---KGGFKSLAEGEEVEYEV 141
Query: 256 MQGDKGNQFCFVLKNIV 272
G KG F N+
Sbjct: 142 NAGQKG----FTAANVT 154
>gi|270261474|ref|ZP_06189747.1| hypothetical protein SOD_a07060 [Serratia odorifera 4Rx13]
gi|333926853|ref|YP_004500432.1| cold-shock DNA-binding domain-containing protein [Serratia sp.
AS12]
gi|333931807|ref|YP_004505385.1| cold-shock DNA-binding domain-containing protein [Serratia
plymuthica AS9]
gi|386328676|ref|YP_006024846.1| cold-shock protein [Serratia sp. AS13]
gi|386824895|ref|ZP_10112024.1| cold-shock DNA-binding domain-containing protein [Serratia
plymuthica PRI-2C]
gi|421783123|ref|ZP_16219575.1| cspA family cold shock transcriptional regulator [Serratia
plymuthica A30]
gi|270044958|gb|EFA18049.1| hypothetical protein SOD_a07060 [Serratia odorifera 4Rx13]
gi|333473414|gb|AEF45124.1| cold-shock DNA-binding domain protein [Serratia plymuthica AS9]
gi|333490913|gb|AEF50075.1| cold-shock DNA-binding domain protein [Serratia sp. AS12]
gi|333961009|gb|AEG27782.1| cold-shock DNA-binding domain protein [Serratia sp. AS13]
gi|386378340|gb|EIJ19148.1| cold-shock DNA-binding domain-containing protein [Serratia
plymuthica PRI-2C]
gi|407754829|gb|EKF64960.1| cspA family cold shock transcriptional regulator [Serratia
plymuthica A30]
Length = 70
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++TK+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSTKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQRVEFTIE 56
Query: 90 QGDKGHEAINV 100
G KG A NV
Sbjct: 57 SGAKGPSAGNV 67
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++TK+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSTKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQRVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 SGAKG 61
>gi|238750463|ref|ZP_04611964.1| Cold shock-like protein cspI [Yersinia rohdei ATCC 43380]
gi|238790115|ref|ZP_04633892.1| Cold shock-like protein cspI [Yersinia frederiksenii ATCC 33641]
gi|238794420|ref|ZP_04638030.1| Cold shock-like protein cspI [Yersinia intermedia ATCC 29909]
gi|238711394|gb|EEQ03611.1| Cold shock-like protein cspI [Yersinia rohdei ATCC 43380]
gi|238721784|gb|EEQ13447.1| Cold shock-like protein cspI [Yersinia frederiksenii ATCC 33641]
gi|238726215|gb|EEQ17759.1| Cold shock-like protein cspI [Yersinia intermedia ATCC 29909]
Length = 66
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF G+GFI+ ++DVFVH I+ + YKTL EG+ VEF I QG KG
Sbjct: 3 GLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGTD----YKTLDEGQNVEFSIEQGQKGP 58
Query: 96 EAINVTG 102
A+NV
Sbjct: 59 SAVNVVA 65
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G+VKWF G+GFI+ ++DVFVH I+ + YKTL EG+ VEF I QG KG
Sbjct: 3 GLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGTD----YKTLDEGQNVEFSIEQGQKG 57
>gi|357518027|ref|XP_003629302.1| Major cold-shock protein [Medicago truncatula]
gi|355523324|gb|AET03778.1| Major cold-shock protein [Medicago truncatula]
Length = 329
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
++ GVV+WF+ G+GFI +ED+FVH I+ + +++L+EG+ VEF I GD
Sbjct: 5 RISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIR----SEGFRSLSEGDRVEFTIADGD 60
Query: 93 KGH-EAINVTGPDGRHVQ 109
G +A++VTGP G +Q
Sbjct: 61 NGKTKAVDVTGPKGEPLQ 78
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
++ GVV+WF+ G+GFI +ED+FVH I+ + +++L+EG+ VEF I GD
Sbjct: 5 RISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIR----SEGFRSLSEGDRVEFTIADGD 60
Query: 260 KG 261
G
Sbjct: 61 NG 62
>gi|291045286|ref|NP_001166916.1| protein lin-28 homolog A [Felis catus]
gi|73950555|ref|XP_854985.1| PREDICTED: protein lin-28 homolog A [Canis lupus familiaris]
gi|264670123|gb|ACY72346.1| lin-28-like protein [Felis catus]
Length = 206
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 6 SGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 58
+G A+A P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
VFVH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE------ 117
Query: 119 KYNRRKAKANKRKRKSR 135
RR N +KR+S+
Sbjct: 118 ---RRPKGKNMQKRRSK 131
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 173 SGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 225
+G A+A P + +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
VFVH ++ +++L EGE VEF + KG
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 99
>gi|15617086|ref|NP_240299.1| cold shock protein CspE [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|21672738|ref|NP_660805.1| cold shock protein CspE [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|219681838|ref|YP_002468224.1| cold shock protein CspE [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|219682393|ref|YP_002468777.1| cold shock protein CspE [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471542|ref|ZP_05635541.1| cold shock protein CspE [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|384226284|ref|YP_005617447.1| cold shock protein CspE [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384226777|ref|YP_005618528.1| cold shock protein CspE [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|384227337|ref|YP_005619087.1| cold shock protein CspE [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|384227907|ref|YP_005619652.1| cold shock protein CspE [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
gi|414562842|ref|YP_005618033.1| cold shock protein CspE [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|54036912|sp|P63237.2|CSPE_BUCAI RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|54036913|sp|P63238.2|CSPE_BUCAP RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|25296105|pir||A84987 cold shock-like protein cspE [imported] - Buchnera sp. (strain
APS)
gi|10039151|dbj|BAB13185.1| cold shock-like protein cspE [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|21623383|gb|AAM68016.1| cold shock like protein CspE [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|219622126|gb|ACL30282.1| cold shock protein E [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|219624681|gb|ACL30836.1| cold shock protein E [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|311086213|gb|ADP66295.1| cold shock protein CspE [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086791|gb|ADP66872.1| cold shock protein CspE [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087378|gb|ADP67458.1| cold shock protein CspE [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087874|gb|ADP67953.1| cold shock protein CspE [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|345538847|gb|AEO08824.1| cold shock protein CspE [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
Length = 69
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQSVEFEITEG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQSVEFEITEG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|386284357|ref|ZP_10061579.1| cold-shock DNA-binding domain-containing protein [Sulfurovum sp.
AR]
gi|385344642|gb|EIF51356.1| cold-shock DNA-binding domain-containing protein [Sulfurovum sp.
AR]
Length = 72
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+AT+V G VKWF+ + G+GFI + DVFVH ++I N ++ +L EG+ V F+I
Sbjct: 1 MATQVNGTVKWFNSEKGFGFIEQENGGNDVFVHYRQINSNGYDRV--SLNEGQKVTFEIG 58
Query: 90 QGDKGHEAINVT 101
+G KG +A NVT
Sbjct: 59 EGQKGPQAENVT 70
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+AT+V G VKWF+ + G+GFI + DVFVH ++I N ++ +L EG+ V F+I
Sbjct: 1 MATQVNGTVKWFNSEKGFGFIEQENGGNDVFVHYRQINSNGYDRV--SLNEGQKVTFEIG 58
Query: 257 QGDKGNQ 263
+G KG Q
Sbjct: 59 EGQKGPQ 65
>gi|300719018|ref|YP_003743821.1| cold-shock protein [Erwinia billingiae Eb661]
gi|299064854|emb|CAX61974.1| Cold-shock DNA-binding domain protein [Erwinia billingiae Eb661]
Length = 70
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ + G+VKWF+ G+GFI+ ++DVFVH I+ N+ +KTL EG+TV+F +
Sbjct: 1 MSDSMTGLVKWFNADKGFGFISPQDGSKDVFVHFSAIQSND----FKTLDEGQTVQFSVE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPSAVNV 67
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ + G+VKWF+ G+GFI+ ++DVFVH I+ N+ +KTL EG+TV+F +
Sbjct: 1 MSDSMTGLVKWFNADKGFGFISPQDGSKDVFVHFSAIQSND----FKTLDEGQTVQFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|9957540|gb|AAG09405.1|AF179614_1 cold shock protein B [Yersinia enterocolitica]
Length = 62
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFSIE 56
Query: 90 QGDKG 94
QG KG
Sbjct: 57 QGQKG 61
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ YKTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND----YKTLDEGQNVEFSIE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGQKG 61
>gi|403253191|ref|ZP_10919494.1| cold shock protein [Thermotoga sp. EMP]
gi|402811455|gb|EJX25941.1| cold shock protein [Thermotoga sp. EMP]
Length = 66
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI T + ED+FVH I+ + +KTL E E+VEF++ QG KG
Sbjct: 3 GTVKWFDSKKGYGFI-TMENGEDIFVHWSAIQMDG----FKTLRENESVEFEVQQGTKGP 57
Query: 96 EAINV 100
+A+NV
Sbjct: 58 QAVNV 62
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI T + ED+FVH I+ + +KTL E E+VEF++ QG KG
Sbjct: 3 GTVKWFDSKKGYGFI-TMENGEDIFVHWSAIQMDG----FKTLRENESVEFEVQQGTKGP 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|356507945|ref|XP_003522723.1| PREDICTED: uncharacterized protein LOC100820359 [Glycine max]
Length = 194
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
+V G VKWF + G+GFI T S E+ FVH I+ + +++LA GE+VEF I
Sbjct: 8 RVTGKVKWFDDQKGFGFITTDDSGEEFFVHQSSIRSDG----FRSLALGESVEFLIDSDP 63
Query: 93 KGH-EAINVTGPDGRHVQGS 111
+G +A++VTGPD VQG+
Sbjct: 64 EGRTKAVDVTGPDESPVQGT 83
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
+V G VKWF + G+GFI T S E+ FVH I+ + +++LA GE+VEF I
Sbjct: 8 RVTGKVKWFDDQKGFGFITTDDSGEEFFVHQSSIRSDG----FRSLALGESVEFLI 59
>gi|440779973|ref|ZP_20958561.1| Cold shock protein [Clostridium pasteurianum DSM 525]
gi|440221649|gb|ELP60853.1| Cold shock protein [Clostridium pasteurianum DSM 525]
Length = 65
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G VKWF+ + GYGFI T +DVFVH I+ + +KTL EGE VEF++ QG K
Sbjct: 1 MTGNVKWFNAQKGYGFITTEDG-KDVFVHYSGIEESG----FKTLEEGEKVEFELTQGQK 55
Query: 94 GHEAINV 100
G +A+NV
Sbjct: 56 GDQAVNV 62
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G VKWF+ + GYGFI T +DVFVH I+ + +KTL EGE VEF++ QG K
Sbjct: 1 MTGNVKWFNAQKGYGFITTEDG-KDVFVHYSGIEESG----FKTLEEGEKVEFELTQGQK 55
Query: 261 GNQFCFVLK 269
G+Q V K
Sbjct: 56 GDQAVNVRK 64
>gi|281500776|pdb|3I2Z|B Chain B, Structure Of Cold Shock Protein E From Salmonella
Typhimurium
gi|281500777|pdb|3I2Z|A Chain A, Structure Of Cold Shock Protein E From Salmonella
Typhimurium
Length = 71
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 4 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 59
Query: 92 DKGHEAINVT 101
KG A NVT
Sbjct: 60 AKGPSAANVT 69
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 4 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 59
Query: 259 DKG 261
KG
Sbjct: 60 AKG 62
>gi|66359918|ref|XP_627137.1| cold shock RNA binding domain of the OB fold [Cryptosporidium
parvum Iowa II]
gi|46228824|gb|EAK89694.1| cold shock RNA binding domain of the OB fold [Cryptosporidium
parvum Iowa II]
Length = 135
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ GV KWF G+GFI +ED+FVH + IK +++LA+ E VE++I DK
Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEG----FRSLAQDERVEYEIETDDK 66
Query: 94 G-HEAINVTGPDGRHVQ 109
G +A+NV+GP+G V+
Sbjct: 67 GRRKAVNVSGPNGAPVK 83
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ GV KWF G+GFI +ED+FVH + IK +++LA+ E VE++I DK
Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEG----FRSLAQDERVEYEIETDDK 66
Query: 261 GNQ 263
G +
Sbjct: 67 GRR 69
>gi|357407832|ref|YP_004919755.1| cold-shock protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386353176|ref|YP_006051423.1| cold shock protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337762781|emb|CCB71489.1| cold-shock protein, molecular chaperone, RNA-helicase co-factor
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365811255|gb|AEW99470.1| cold shock protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 67
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFIA DVF H I N Y+ L EGETV FDI QG KG
Sbjct: 4 GTVKWFNSEKGYGFIAQDGGGPDVFAHYSNISGNG----YRELLEGETVTFDITQGAKGP 59
Query: 96 EAINV 100
+A N+
Sbjct: 60 QAENI 64
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFIA DVF H I N Y+ L EGETV FDI QG KG
Sbjct: 4 GTVKWFNSEKGYGFIAQDGGGPDVFAHYSNISGNG----YRELLEGETVTFDITQGAKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|444706313|gb|ELW47656.1| Protein lin-28 like protein A [Tupaia chinensis]
Length = 247
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 23 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLY 75
P EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +
Sbjct: 69 PSAEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----F 122
Query: 76 KTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
++L EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 123 RSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 176
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 190 PKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLY 242
P EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +
Sbjct: 69 PSAEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----F 122
Query: 243 KTLAEGETVEFDIMQGDKG 261
++L EGE VEF + KG
Sbjct: 123 RSLKEGEAVEFTFKKSAKG 141
>gi|418291999|ref|ZP_12903950.1| cold-shock protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379063433|gb|EHY76176.1| cold-shock protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 202
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ G+GFI+ S N DVFVH + I+ ++ L EG+ VEF IM DKG
Sbjct: 136 AGTVKWFNTSKGFGFISRDSGN-DVFVHFRAIRGEG----HRILVEGQRVEFTIMMRDKG 190
Query: 95 HEAINVTGPDGR 106
+A +V DGR
Sbjct: 191 LQAEDVVPTDGR 202
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ G+GFI+ S N DVFVH + I+ ++ L EG+ VEF IM DKG
Sbjct: 136 AGTVKWFNTSKGFGFISRDSGN-DVFVHFRAIRGEG----HRILVEGQRVEFTIMMRDKG 190
Query: 262 NQ 263
Q
Sbjct: 191 LQ 192
>gi|116515229|ref|YP_802858.1| cold shock protein CspE [Buchnera aphidicola BCc]
gi|116257083|gb|ABJ90765.1| RNA chaperone, transcription antiterminator [Buchnera aphidicola
BCc]
Length = 69
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQSVEFEITEG 57
Query: 92 DKGHEAINVT 101
KG A NV
Sbjct: 58 AKGPSAANVV 67
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQSVEFEITEG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|398936707|ref|ZP_10667093.1| cold shock domain protein CspD [Pseudomonas sp. GM41(2012)]
gi|398167609|gb|EJM55661.1| cold shock domain protein CspD [Pseudomonas sp. GM41(2012)]
Length = 88
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
KV G VKWF+ GYGFI +ED+F H IK + YKTL G+ V F+I+Q
Sbjct: 3 GVKVSGKVKWFNNAKGYGFINEEGKSEDLFAHYSAIKMDG----YKTLKAGQAVVFEIIQ 58
Query: 91 GDKGHEAINVTGP 103
G KG A+N+ P
Sbjct: 59 GPKGLHAVNIGTP 71
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
KV G VKWF+ GYGFI +ED+F H IK + YKTL G+ V F+I+Q
Sbjct: 3 GVKVSGKVKWFNNAKGYGFINEEGKSEDLFAHYSAIKMDG----YKTLKAGQAVVFEIIQ 58
Query: 258 GDKG 261
G KG
Sbjct: 59 GPKG 62
>gi|419880228|ref|ZP_14401631.1| cold shock protein CspE [Escherichia coli O111:H11 str. CVM9545]
gi|388369609|gb|EIL33196.1| cold shock protein CspE [Escherichia coli O111:H11 str. CVM9545]
Length = 69
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI S++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDSSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI S++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDSSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|237807342|ref|YP_002891782.1| cold-shock DNA-binding domain-containing protein [Tolumonas auensis
DSM 9187]
gi|237499603|gb|ACQ92196.1| cold-shock DNA-binding domain protein [Tolumonas auensis DSM 9187]
Length = 69
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+KV G VKWF+ G+GF++ + +DVFVH I +KTLAEG+ V FDI +G
Sbjct: 2 SKVNGSVKWFNETKGFGFLSQDNGGKDVFVHFSAIASTG----FKTLAEGQAVSFDIEEG 57
Query: 92 DKGHEAINVT 101
+G A+NVT
Sbjct: 58 QRGPSAVNVT 67
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+KV G VKWF+ G+GF++ + +DVFVH I +KTLAEG+ V FDI +G
Sbjct: 2 SKVNGSVKWFNETKGFGFLSQDNGGKDVFVHFSAIASTG----FKTLAEGQAVSFDIEEG 57
Query: 259 DKG 261
+G
Sbjct: 58 QRG 60
>gi|2970685|gb|AAC06037.1| cold shock protein C [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 69
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G KWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQGKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G KWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQGKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|336233401|ref|YP_004590147.1| cold shock protein CspE [Buchnera aphidicola (Cinara tujafilina)]
gi|384228461|ref|YP_005620196.1| cold shock protein CspE [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|335345342|gb|AEH39888.1| cold shock protein CspE [Buchnera aphidicola (Cinara tujafilina)]
gi|345539394|gb|AEO08261.1| cold shock protein CspE [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 69
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQSVEFEITEG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG++VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQSVEFEITEG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|224475930|ref|YP_002633536.1| putative cold-shock protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420537|emb|CAL27351.1| putative cold-shock protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 67
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI + +DVFVH I+ + YKTL EG++V+FDI++GD+G
Sbjct: 4 GTVKWFNAEKGFGFIER-ENGDDVFVHFSAIQGDG----YKTLEEGQSVDFDIVEGDRGE 58
Query: 96 EAINV 100
+A NV
Sbjct: 59 QAANV 63
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI + +DVFVH I+ + YKTL EG++V+FDI++GD+G
Sbjct: 4 GTVKWFNAEKGFGFIER-ENGDDVFVHFSAIQGDG----YKTLEEGQSVDFDIVEGDRGE 58
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 59 QAANVVK 65
>gi|300796242|ref|NP_001179986.1| protein lin-28 homolog A [Bos taurus]
gi|296490058|tpg|DAA32171.1| TPA: lin-28 homolog [Bos taurus]
Length = 205
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 6 SGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 58
+G A+A P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
VFVH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE------ 117
Query: 119 KYNRRKAKANKRKRKSR 135
RR N +KR+S+
Sbjct: 118 ---RRPKGKNMQKRRSK 131
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 173 SGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 225
+G A+A P + +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
VFVH ++ +++L EGE VEF + KG
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 99
>gi|16765332|ref|NP_460947.1| cold-shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56413093|ref|YP_150168.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161613431|ref|YP_001587396.1| hypothetical protein SPAB_01147 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197362019|ref|YP_002141656.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|205352312|ref|YP_002226113.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207856492|ref|YP_002243143.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224583507|ref|YP_002637305.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238912431|ref|ZP_04656268.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|374981021|ref|ZP_09722351.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375118572|ref|ZP_09763739.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|375123109|ref|ZP_09768273.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|378445382|ref|YP_005233014.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450609|ref|YP_005237968.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378699861|ref|YP_005181818.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378955560|ref|YP_005213047.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|378984558|ref|YP_005247713.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378989337|ref|YP_005252501.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379701176|ref|YP_005242904.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383496667|ref|YP_005397356.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386591821|ref|YP_006088221.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409249558|ref|YP_006885380.1| Cold shock-like protein cspG CPS-G [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416421750|ref|ZP_11689748.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416433826|ref|ZP_11697249.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416436646|ref|ZP_11698448.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416449108|ref|ZP_11706759.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416452428|ref|ZP_11708979.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416456595|ref|ZP_11711599.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416469673|ref|ZP_11718590.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416475012|ref|ZP_11720414.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416493894|ref|ZP_11728038.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416498259|ref|ZP_11730185.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416504902|ref|ZP_11733484.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416512537|ref|ZP_11737820.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416527886|ref|ZP_11743534.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416535057|ref|ZP_11747421.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416542692|ref|ZP_11751758.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416549008|ref|ZP_11755178.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416562384|ref|ZP_11762084.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416566751|ref|ZP_11764003.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416579395|ref|ZP_11771253.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416585266|ref|ZP_11774819.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416589849|ref|ZP_11777365.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416601325|ref|ZP_11784989.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416604268|ref|ZP_11786028.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416611943|ref|ZP_11791122.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416619911|ref|ZP_11795387.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416632564|ref|ZP_11801454.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416638190|ref|ZP_11803786.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416651809|ref|ZP_11811326.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416660044|ref|ZP_11814967.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416666517|ref|ZP_11817591.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416675619|ref|ZP_11821632.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416690036|ref|ZP_11825711.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416705105|ref|ZP_11830717.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416711094|ref|ZP_11835052.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416716962|ref|ZP_11839254.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416722097|ref|ZP_11843156.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416732144|ref|ZP_11849669.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416736006|ref|ZP_11851752.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416745490|ref|ZP_11857406.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416755487|ref|ZP_11862087.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416762975|ref|ZP_11866847.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416769477|ref|ZP_11871139.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|417325583|ref|ZP_12111509.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417332928|ref|ZP_12116650.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|417341011|ref|ZP_12122191.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417348298|ref|ZP_12127282.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417357307|ref|ZP_12132514.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417365062|ref|ZP_12137816.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417372605|ref|ZP_12142857.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417382703|ref|ZP_12148592.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417390013|ref|ZP_12153625.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417414699|ref|ZP_12158545.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|417456860|ref|ZP_12163737.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417474459|ref|ZP_12169567.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417509688|ref|ZP_12174784.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|417517644|ref|ZP_12180187.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417529622|ref|ZP_12185288.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|418483989|ref|ZP_13052993.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418492577|ref|ZP_13059059.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418493831|ref|ZP_13060293.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418497504|ref|ZP_13063921.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418502240|ref|ZP_13068612.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418509603|ref|ZP_13075897.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418513227|ref|ZP_13079458.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418527821|ref|ZP_13093777.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418789462|ref|ZP_13345249.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418794262|ref|ZP_13349984.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418796861|ref|ZP_13352552.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418809542|ref|ZP_13365094.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418813695|ref|ZP_13369216.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418814962|ref|ZP_13370470.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418822749|ref|ZP_13378160.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418826601|ref|ZP_13381805.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418830201|ref|ZP_13385164.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418836584|ref|ZP_13391468.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418840643|ref|ZP_13395472.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418844908|ref|ZP_13399694.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418850675|ref|ZP_13405391.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418853817|ref|ZP_13408502.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418858961|ref|ZP_13413570.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418863569|ref|ZP_13418107.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418868230|ref|ZP_13422673.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419730348|ref|ZP_14257294.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735364|ref|ZP_14262244.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419741131|ref|ZP_14267841.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419742402|ref|ZP_14269076.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419747311|ref|ZP_14273842.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421358534|ref|ZP_15808831.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421362503|ref|ZP_15812755.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421367704|ref|ZP_15817897.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421373913|ref|ZP_15824048.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421378116|ref|ZP_15828205.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421382726|ref|ZP_15832772.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421387546|ref|ZP_15837545.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421391650|ref|ZP_15841616.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421395146|ref|ZP_15845085.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421401412|ref|ZP_15851288.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421402987|ref|ZP_15852841.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421410353|ref|ZP_15860134.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421412619|ref|ZP_15862373.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421416612|ref|ZP_15866331.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421421607|ref|ZP_15871275.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421425218|ref|ZP_15874854.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421432086|ref|ZP_15881663.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436498|ref|ZP_15886025.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421441439|ref|ZP_15890909.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421446624|ref|ZP_15896036.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421447731|ref|ZP_15897127.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421568943|ref|ZP_16014651.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421574615|ref|ZP_16020236.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421579776|ref|ZP_16025338.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584897|ref|ZP_16030403.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421884216|ref|ZP_16315432.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422026200|ref|ZP_16372602.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422031226|ref|ZP_16377401.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427550518|ref|ZP_18927906.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427566691|ref|ZP_18932621.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427586962|ref|ZP_18937412.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427610270|ref|ZP_18942277.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427634048|ref|ZP_18947170.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427656235|ref|ZP_18951935.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427661384|ref|ZP_18956848.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427669357|ref|ZP_18961649.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427769086|ref|ZP_18966836.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|436789952|ref|ZP_20521421.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436793381|ref|ZP_20521660.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436811511|ref|ZP_20530391.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436815882|ref|ZP_20533433.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436839029|ref|ZP_20537349.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436851477|ref|ZP_20542076.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436858241|ref|ZP_20546761.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436865415|ref|ZP_20551382.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436875411|ref|ZP_20557318.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436883466|ref|ZP_20561895.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436887674|ref|ZP_20564003.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436896535|ref|ZP_20569291.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436906515|ref|ZP_20575361.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436911536|ref|ZP_20577365.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436921011|ref|ZP_20583482.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436930605|ref|ZP_20588830.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436935489|ref|ZP_20590929.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436942678|ref|ZP_20595624.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436951830|ref|ZP_20600885.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436964461|ref|ZP_20606097.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436971562|ref|ZP_20609955.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436985632|ref|ZP_20615152.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436991400|ref|ZP_20617411.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437012385|ref|ZP_20624898.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437020644|ref|ZP_20627455.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437030064|ref|ZP_20631246.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437044825|ref|ZP_20637372.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437052537|ref|ZP_20641960.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437058008|ref|ZP_20644855.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437071004|ref|ZP_20652104.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437075700|ref|ZP_20654063.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437086737|ref|ZP_20660746.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437095286|ref|ZP_20664390.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437100506|ref|ZP_20665993.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437126084|ref|ZP_20674353.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437134421|ref|ZP_20678845.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437139666|ref|ZP_20681930.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437147195|ref|ZP_20686747.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437155487|ref|ZP_20691706.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437160049|ref|ZP_20694438.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437171597|ref|ZP_20700701.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437177429|ref|ZP_20703909.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437185698|ref|ZP_20709132.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437230879|ref|ZP_20713413.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437261064|ref|ZP_20718134.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437269104|ref|ZP_20722389.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437281892|ref|ZP_20728893.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437302878|ref|ZP_20733672.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437313513|ref|ZP_20736818.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437322118|ref|ZP_20738843.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437344129|ref|ZP_20746143.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437378992|ref|ZP_20750110.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437413806|ref|ZP_20753581.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437453246|ref|ZP_20759784.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437461432|ref|ZP_20762352.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437478614|ref|ZP_20767627.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437496907|ref|ZP_20773315.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437506439|ref|ZP_20775722.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437538514|ref|ZP_20782084.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437549878|ref|ZP_20783491.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437575306|ref|ZP_20790102.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437592893|ref|ZP_20795283.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437607638|ref|ZP_20800416.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437618438|ref|ZP_20803150.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437651686|ref|ZP_20809913.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437657634|ref|ZP_20811169.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437698597|ref|ZP_20823293.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437703712|ref|ZP_20824597.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437737433|ref|ZP_20832958.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437792964|ref|ZP_20837325.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437803445|ref|ZP_20838554.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437841186|ref|ZP_20846610.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437910893|ref|ZP_20850230.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|437996688|ref|ZP_20853986.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438088395|ref|ZP_20859791.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438101283|ref|ZP_20864234.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438112544|ref|ZP_20869141.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438130668|ref|ZP_20873506.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445138018|ref|ZP_21383871.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445148080|ref|ZP_21388590.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445153961|ref|ZP_21391596.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445167741|ref|ZP_21394571.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445216861|ref|ZP_21402150.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445233658|ref|ZP_21406475.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445249108|ref|ZP_21408661.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445338644|ref|ZP_21416217.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445349097|ref|ZP_21419876.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445365236|ref|ZP_21425226.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|452119811|ref|YP_007470059.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|325530013|sp|E1WGN1.1|CSPJ_SALTS RecName: Full=Cold shock-like protein CspJ
gi|325530014|sp|P0CL01.1|CSPJ_SALTY RecName: Full=Cold shock-like protein CspJ
gi|2961317|emb|CAA72682.1| cspB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420530|gb|AAL20906.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56127350|gb|AAV76856.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161362795|gb|ABX66563.1| hypothetical protein SPAB_01147 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197093496|emb|CAR58956.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|205272093|emb|CAR36945.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206708295|emb|CAR32598.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468034|gb|ACN45864.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261247161|emb|CBG24984.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267993987|gb|ACY88872.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158509|emb|CBW18019.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912986|dbj|BAJ36960.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320085386|emb|CBY95167.1| Cold shock-like protein cspG CPS-G [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224641|gb|EFX49704.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322616988|gb|EFY13896.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618228|gb|EFY15120.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625898|gb|EFY22717.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626350|gb|EFY23160.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632765|gb|EFY29510.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322639107|gb|EFY35800.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640379|gb|EFY37036.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647216|gb|EFY43715.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322648415|gb|EFY44868.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322655544|gb|EFY51852.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660322|gb|EFY56560.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322663003|gb|EFY59210.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668188|gb|EFY64347.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322674053|gb|EFY70147.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675595|gb|EFY71669.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322682994|gb|EFY79010.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322686688|gb|EFY82666.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323130275|gb|ADX17705.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|323195075|gb|EFZ80259.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197875|gb|EFZ83000.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204480|gb|EFZ89486.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323210991|gb|EFZ95851.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323217555|gb|EGA02274.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323222458|gb|EGA06829.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227477|gb|EGA11639.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231577|gb|EGA15690.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236020|gb|EGA20099.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240590|gb|EGA24633.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323245482|gb|EGA29482.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247600|gb|EGA31551.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323254428|gb|EGA38244.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257760|gb|EGA41440.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323262133|gb|EGA45696.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323266256|gb|EGA49746.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270733|gb|EGA54172.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326622839|gb|EGE29184.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|326627359|gb|EGE33702.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|332988884|gb|AEF07867.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353575620|gb|EHC38312.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353576017|gb|EHC38599.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353580211|gb|EHC41539.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353594251|gb|EHC51815.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353595512|gb|EHC52757.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353604813|gb|EHC59491.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353614113|gb|EHC66041.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353620047|gb|EHC70271.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353624884|gb|EHC73818.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353634165|gb|EHC80808.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353647481|gb|EHC90595.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353648548|gb|EHC91425.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353651214|gb|EHC93368.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353667236|gb|EHD04811.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357206171|gb|AET54217.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|357958414|gb|EHJ83045.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|363554643|gb|EHL38877.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363557350|gb|EHL41557.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363566199|gb|EHL50216.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363569338|gb|EHL53298.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363570244|gb|EHL54181.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363572715|gb|EHL56603.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363579425|gb|EHL63211.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366056026|gb|EHN20357.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366059774|gb|EHN24041.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366063976|gb|EHN28187.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366075261|gb|EHN39318.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366075596|gb|EHN39648.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366078310|gb|EHN42315.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366082124|gb|EHN46061.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366827556|gb|EHN54462.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372204449|gb|EHP17977.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|379986297|emb|CCF87705.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380463488|gb|AFD58891.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381292704|gb|EIC33880.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381294356|gb|EIC35495.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381295128|gb|EIC36249.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381314273|gb|EIC55047.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381319583|gb|EIC60279.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383798865|gb|AFH45947.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392760703|gb|EJA17538.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392762257|gb|EJA19073.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392770234|gb|EJA26962.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392773627|gb|EJA30323.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392774921|gb|EJA31616.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392787006|gb|EJA43554.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392793341|gb|EJA49785.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392800945|gb|EJA57175.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392802434|gb|EJA58648.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392805207|gb|EJA61340.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392811133|gb|EJA67145.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392813717|gb|EJA69681.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392818525|gb|EJA74409.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392825957|gb|EJA81691.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392831200|gb|EJA86834.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392833437|gb|EJA89052.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392838136|gb|EJA93700.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|395986224|gb|EJH95388.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395986974|gb|EJH96137.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395990327|gb|EJH99458.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395994765|gb|EJI03831.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|395997421|gb|EJI06462.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395997834|gb|EJI06874.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396008371|gb|EJI17305.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396010613|gb|EJI19525.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396013883|gb|EJI22770.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396021477|gb|EJI30303.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396022486|gb|EJI31299.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396030018|gb|EJI38753.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396039707|gb|EJI48331.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396040922|gb|EJI49545.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396044789|gb|EJI53384.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396051337|gb|EJI59855.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396052840|gb|EJI61345.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396057688|gb|EJI66158.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396062206|gb|EJI70619.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396065042|gb|EJI73425.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396074028|gb|EJI82319.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|402521251|gb|EJW28589.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402524815|gb|EJW32112.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402528635|gb|EJW35886.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402530657|gb|EJW37872.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414018085|gb|EKT01758.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414018901|gb|EKT02532.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414020866|gb|EKT04438.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414032588|gb|EKT15585.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414034157|gb|EKT17093.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414037403|gb|EKT20178.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414047412|gb|EKT29697.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414048659|gb|EKT30898.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414053217|gb|EKT35228.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414059574|gb|EKT41143.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414065095|gb|EKT45896.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|434941645|gb|ELL48061.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434957376|gb|ELL51022.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434963499|gb|ELL56593.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434964142|gb|ELL57164.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434973998|gb|ELL66386.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434980337|gb|ELL72258.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434986779|gb|ELL78430.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434990393|gb|ELL81943.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434995002|gb|ELL86319.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|434996450|gb|ELL87766.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435001911|gb|ELL93000.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435009384|gb|ELM00170.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435015092|gb|ELM05649.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435016424|gb|ELM06950.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435025781|gb|ELM15912.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435027133|gb|ELM17262.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435032260|gb|ELM22204.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435038327|gb|ELM28108.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435042877|gb|ELM32594.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435048318|gb|ELM37883.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435052297|gb|ELM41799.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435057851|gb|ELM47220.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435062472|gb|ELM51654.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435063705|gb|ELM52853.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435067977|gb|ELM57006.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435079272|gb|ELM67983.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435080644|gb|ELM69312.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435083098|gb|ELM71709.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435089638|gb|ELM78059.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435091137|gb|ELM79538.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435093821|gb|ELM82160.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435102883|gb|ELM90986.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435104997|gb|ELM93034.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435109663|gb|ELM97609.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435117165|gb|ELN04877.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435119900|gb|ELN07502.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435125302|gb|ELN12750.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435131071|gb|ELN18298.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435134825|gb|ELN21951.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435138355|gb|ELN25382.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435146119|gb|ELN32913.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435148279|gb|ELN35007.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435155109|gb|ELN41667.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435159391|gb|ELN45731.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435163520|gb|ELN49656.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435168510|gb|ELN54342.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435172754|gb|ELN58281.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435177864|gb|ELN63132.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435182268|gb|ELN67296.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435191183|gb|ELN75750.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435195891|gb|ELN80248.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435197364|gb|ELN81652.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435202783|gb|ELN86597.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435203924|gb|ELN87660.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435208107|gb|ELN91530.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435219855|gb|ELO02173.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435221433|gb|ELO03706.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435225722|gb|ELO07365.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435234630|gb|ELO15484.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435238851|gb|ELO19471.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435245271|gb|ELO25358.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435246641|gb|ELO26639.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435252670|gb|ELO32181.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435253726|gb|ELO33150.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435259351|gb|ELO38577.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435266807|gb|ELO45538.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435271129|gb|ELO49601.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435275299|gb|ELO53383.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435284769|gb|ELO62196.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435293122|gb|ELO69842.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435293255|gb|ELO69960.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435296781|gb|ELO73134.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435303334|gb|ELO79233.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435317459|gb|ELO90507.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435317707|gb|ELO90731.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435324855|gb|ELO96783.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435330622|gb|ELP01888.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435336196|gb|ELP06196.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|444843676|gb|ELX68929.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444843933|gb|ELX69180.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444851580|gb|ELX76668.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444858081|gb|ELX83073.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444861156|gb|ELX86045.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444865038|gb|ELX89818.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444872781|gb|ELX97099.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444875595|gb|ELX99792.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444883049|gb|ELY06963.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444889909|gb|ELY13294.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|451908815|gb|AGF80621.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 70
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 90 QGDKGHEAINV 100
QG KG A+NV
Sbjct: 57 QGPKGPSAVNV 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGPKG 61
>gi|218961622|ref|YP_001741397.1| cold-shock domain family protein [Candidatus Cloacamonas
acidaminovorans]
gi|167730279|emb|CAO81191.1| cold-shock domain family protein [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 74
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI T N++ FVH K I N+PR+L K L + E V FD+M+ DKG
Sbjct: 7 GKVKWFNKNKGYGFIIT-DDNKEYFVHWKSIVTNSPREL-KVLEQDELVTFDLMETDKGI 64
Query: 96 EAINV 100
+AIN+
Sbjct: 65 QAINI 69
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI T N++ FVH K I N+PR+L K L + E V FD+M+ DKG
Sbjct: 7 GKVKWFNKNKGYGFIIT-DDNKEYFVHWKSIVTNSPREL-KVLEQDELVTFDLMETDKGI 64
Query: 263 Q 263
Q
Sbjct: 65 Q 65
>gi|384228318|ref|YP_005620053.1| cold shock-like protein CspC [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
gi|345539251|gb|AEO08118.1| cold shock-like protein CspC [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
Length = 69
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
TK+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF++ G
Sbjct: 2 TKIKGQVKWFNESKGFGFITPLDGSKDVFVHFSSIQGNG----FKTLTEGQNVEFEVQDG 57
Query: 92 DKGHEAINV 100
KG AINV
Sbjct: 58 QKGPAAINV 66
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
TK+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF++ G
Sbjct: 2 TKIKGQVKWFNESKGFGFITPLDGSKDVFVHFSSIQGNG----FKTLTEGQNVEFEVQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|431891222|gb|ELK02099.1| Lin-28 like protein A [Pteropus alecto]
Length = 204
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 6 SGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 58
+G A+A P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
VFVH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE------ 117
Query: 119 KYNRRKAKANKRKRKSR 135
RR N +KR+S+
Sbjct: 118 ---RRPKGKNMQKRRSK 131
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 173 SGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 225
+G A+A P + +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
VFVH ++ +++L EGE VEF + KG
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 99
>gi|302391175|ref|YP_003826995.1| cold-shock DNA-binding protein family [Acetohalobium arabaticum DSM
5501]
gi|302203252|gb|ADL11930.1| cold-shock DNA-binding protein family [Acetohalobium arabaticum DSM
5501]
Length = 67
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI + EDVFVH I + +KTL +G+ VEF+I++GDKG
Sbjct: 5 GTVKWFDTKKGYGFIES-EEGEDVFVHYSAIDEDG----FKTLEDGQEVEFEIVEGDKGP 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAENV 64
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI + EDVFVH I + +KTL +G+ VEF+I++GDKG
Sbjct: 5 GTVKWFDTKKGYGFIES-EEGEDVFVHYSAIDEDG----FKTLEDGQEVEFEIVEGDKGP 59
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 60 QAENVVK 66
>gi|301755044|ref|XP_002913351.1| PREDICTED: protein lin-28 homolog A-like [Ailuropoda melanoleuca]
gi|281351598|gb|EFB27182.1| hypothetical protein PANDA_001150 [Ailuropoda melanoleuca]
Length = 206
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 6 SGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 58
+G A+A P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
VFVH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE------ 117
Query: 119 KYNRRKAKANKRKRKSR 135
RR N +KR+S+
Sbjct: 118 ---RRPKGKNTQKRRSK 131
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 173 SGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 225
+G A+A P + +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
VFVH ++ +++L EGE VEF + KG
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 99
>gi|356559280|ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
Length = 250
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVV+WF+ G+GFI ED+FVH I+ + Y+TL EG+ VEF I GD
Sbjct: 8 GVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDG----YRTLLEGDRVEFAIATGDNDK 63
Query: 96 -EAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRRNNRLFGVKYQL 147
+A++VTG DG +Q AAN +A +RRN YQ
Sbjct: 64 TKAVDVTGVDGAPLQPRASAANN--------RAGGSGFGARRNGGSGAACYQC 108
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
GVV+WF+ G+GFI ED+FVH I+ + Y+TL EG+ VEF I GD
Sbjct: 8 GVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDG----YRTLLEGDRVEFAIATGD 60
>gi|387612310|ref|YP_006115426.1| cold shock-like protein CspC [Escherichia coli ETEC H10407]
gi|309702046|emb|CBJ01360.1| cold shock-like protein CspC [Escherichia coli ETEC H10407]
Length = 69
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDS 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I
Sbjct: 2 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDS 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|116669342|ref|YP_830275.1| cold-shock DNA-binding protein family protein [Arthrobacter sp.
FB24]
gi|116609451|gb|ABK02175.1| cold-shock DNA-binding protein family [Arthrobacter sp. FB24]
Length = 67
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI S +DVFVH I+ R+ Y+ L EG+ V+F++ +G+KG
Sbjct: 4 GTVKWFNAEKGYGFITVDGSGDDVFVHWSAIE----REGYRALDEGQRVQFEVGEGEKGP 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAENV 64
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI S +DVFVH I+ R+ Y+ L EG+ V+F++ +G+KG
Sbjct: 4 GTVKWFNAEKGYGFITVDGSGDDVFVHWSAIE----REGYRALDEGQRVQFEVGEGEKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|440905961|gb|ELR56277.1| Protein lin-28-like protein A [Bos grunniens mutus]
Length = 205
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 6 SGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 58
+G A+A P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 TGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
VFVH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGK 123
Query: 119 KYNRRKAKANK 129
+R++K ++
Sbjct: 124 NMQKRRSKGDR 134
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 173 SGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 225
+G A+A P + +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 TGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
VFVH ++ +++L EGE VEF + KG
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 99
>gi|152992263|ref|YP_001357984.1| cold shock protein [Sulfurovum sp. NBC37-1]
gi|151424124|dbj|BAF71627.1| cold shock protein [Sulfurovum sp. NBC37-1]
Length = 72
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A V G VKWF+ + GYGFI + DVFVH +++ +N ++ TLAEG+ V F+I
Sbjct: 1 MAELVNGTVKWFNDEKGYGFIQQENGGSDVFVHFRQVNNDNGGRV--TLAEGQAVTFEIG 58
Query: 90 QGDKGHEAINVT 101
+G KG +A NVT
Sbjct: 59 EGQKGPQAENVT 70
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A V G VKWF+ + GYGFI + DVFVH +++ +N ++ TLAEG+ V F+I
Sbjct: 1 MAELVNGTVKWFNDEKGYGFIQQENGGSDVFVHFRQVNNDNGGRV--TLAEGQAVTFEIG 58
Query: 257 QGDKGNQ 263
+G KG Q
Sbjct: 59 EGQKGPQ 65
>gi|375000868|ref|ZP_09725208.1| transcriptional repressor activity CueR [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353075556|gb|EHB41316.1| transcriptional repressor activity CueR [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 70
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 90 QGDKGHEAINV 100
QG KG A+NV
Sbjct: 57 QGPKGPSAVNV 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGPKG 61
>gi|398928016|ref|ZP_10663228.1| cold shock domain protein CspD [Pseudomonas sp. GM48]
gi|398169143|gb|EJM57136.1| cold shock domain protein CspD [Pseudomonas sp. GM48]
Length = 84
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ GYGFI ED+F H IK YKTL G++V FDI+QG KG
Sbjct: 3 VGKVKWFNNAKGYGFINEEGKTEDLFAHYSAIKMEG----YKTLKAGQSVVFDIIQGPKG 58
Query: 95 HEAINVTGP 103
A+N++ P
Sbjct: 59 LHAVNISNP 67
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ GYGFI ED+F H IK YKTL G++V FDI+QG KG
Sbjct: 3 VGKVKWFNNAKGYGFINEEGKTEDLFAHYSAIKMEG----YKTLKAGQSVVFDIIQGPKG 58
>gi|330448696|ref|ZP_08312344.1| cold-shock domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492887|dbj|GAA06841.1| cold-shock domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 69
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKATGIVKWFNEEKGFGFITQDNGGADVFVHFRAITGEG----FKTLAEGQKVSFDIEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGPQAANV 66
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKATGIVKWFNEEKGFGFITQDNGGADVFVHFRAITGEG----FKTLAEGQKVSFDIEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|297677568|ref|XP_002816670.1| PREDICTED: protein lin-28 homolog A-like [Pongo abelii]
Length = 277
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIA-------TPSSNEDVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ T S DVFVH ++ +++L
Sbjct: 102 EPQLLHG--AGICKWFNVRMGFGFLSMTARAGVTLDSPVDVFVHQSKLHMER----FRSL 155
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 156 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 206
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIA-------TPSSNEDVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ T S DVFVH ++ +++L
Sbjct: 102 EPQLLHG--AGICKWFNVRMGFGFLSMTARAGVTLDSPVDVFVHQSKLHMER----FRSL 155
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 156 KEGEAVEFTFKKSAKG 171
>gi|150389414|ref|YP_001319463.1| cold-shock DNA-binding domain-containing protein [Alkaliphilus
metalliredigens QYMF]
gi|149949276|gb|ABR47804.1| putative cold-shock DNA-binding domain protein [Alkaliphilus
metalliredigens QYMF]
Length = 66
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T + +DVFVH I + +KTL EG+ V+F+I+QGDKG
Sbjct: 4 GTVKWFNSEKGYGFI-TRENGDDVFVHFSAITMDG----FKTLEEGQAVQFEIIQGDKGP 58
Query: 96 EAINV 100
+A NV
Sbjct: 59 QATNV 63
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T + +DVFVH I + +KTL EG+ V+F+I+QGDKG
Sbjct: 4 GTVKWFNSEKGYGFI-TRENGDDVFVHFSAITMDG----FKTLEEGQAVQFEIIQGDKGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|178056460|ref|NP_001116605.1| protein lin-28 homolog A [Sus scrofa]
gi|169627101|gb|ACA58282.1| LIN28 [Sus scrofa]
Length = 205
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 6 SGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 58
+G A+A P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
VFVH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE------ 117
Query: 119 KYNRRKAKANKRKRKSR 135
RR N +KR+S+
Sbjct: 118 ---RRPKGKNMQKRRSK 131
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 173 SGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 225
+G A+A P + +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
VFVH ++ +++L EGE VEF + KG
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 99
>gi|440764932|ref|ZP_20943955.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440768346|ref|ZP_20947319.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440774795|ref|ZP_20953682.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436413018|gb|ELP10956.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436415069|gb|ELP12991.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436418226|gb|ELP16112.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
Length = 70
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFIMPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 90 QGDKGHEAINVT 101
QG KG A+NV
Sbjct: 57 QGPKGPSAVNVV 68
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFIMPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGPKG 61
>gi|406658811|ref|ZP_11066951.1| cold shock protein CspA [Streptococcus iniae 9117]
gi|405579026|gb|EKB53140.1| cold shock protein CspA [Streptococcus iniae 9117]
Length = 69
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI+T S +DVF H I+ N +K+L EG+ VEFD+ +G +G
Sbjct: 6 GTVKWFNAEKGFGFISTESG-QDVFAHFSAIQSNG----FKSLDEGQKVEFDVEEGQRGP 60
Query: 96 EAINVT 101
+A+N+T
Sbjct: 61 QAVNIT 66
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI+T S +DVF H I+ N +K+L EG+ VEFD+ +G +G
Sbjct: 6 GTVKWFNAEKGFGFISTESG-QDVFAHFSAIQSNG----FKSLDEGQKVEFDVEEGQRGP 60
Query: 263 QFCFVLK 269
Q + K
Sbjct: 61 QAVNITK 67
>gi|146295937|ref|YP_001179708.1| putative cold-shock DNA-binding domain-containing protein
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409513|gb|ABP66517.1| putative cold-shock DNA-binding domain protein
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 66
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI+T + +DVFVH I YKTLAEG+ VEFD+++ ++G+
Sbjct: 3 GRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEG----YKTLAEGQMVEFDVVKSERGN 57
Query: 96 EAINV 100
+A+NV
Sbjct: 58 QAVNV 62
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI+T + +DVFVH I YKTLAEG+ VEFD+++ ++GN
Sbjct: 3 GRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEG----YKTLAEGQMVEFDVVKSERGN 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QAVNVRK 64
>gi|251783434|ref|YP_002997739.1| cold shock protein [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|410495835|ref|YP_006905681.1| Major cold shock protein [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|242392066|dbj|BAH82525.1| cold shock protein [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|410440995|emb|CCI63623.1| Major cold shock protein [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 69
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI+T + +DVF H I+ N +KTL EG+ VEFD+ +G +G
Sbjct: 6 GTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNG----FKTLEEGQKVEFDVEEGQRGP 60
Query: 96 EAINVT 101
+A+N+T
Sbjct: 61 QAVNIT 66
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI+T + +DVF H I+ N +KTL EG+ VEFD+ +G +G
Sbjct: 6 GTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNG----FKTLEEGQKVEFDVEEGQRGP 60
Query: 263 Q 263
Q
Sbjct: 61 Q 61
>gi|212555421|gb|ACJ27875.1| Cold shock protein, DNA-binding [Shewanella piezotolerans WP3]
Length = 70
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ G+VKWF+ G+GFI + DVFVH + I + +KTLAEG+ V FD+
Sbjct: 1 MSNSTTGIVKWFNEDKGFGFITQDNGGADVFVHFRAIASDG----FKTLAEGQKVSFDLE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A NV
Sbjct: 57 QGQKGPQAANVVA 69
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ G+VKWF+ G+GFI + DVFVH + I + +KTLAEG+ V FD+
Sbjct: 1 MSNSTTGIVKWFNEDKGFGFITQDNGGADVFVHFRAIASDG----FKTLAEGQKVSFDLE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|300715528|ref|YP_003740331.1| Cold shock protein [Erwinia billingiae Eb661]
gi|299061364|emb|CAX58473.1| Cold shock protein [Erwinia billingiae Eb661]
Length = 70
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ + G+GFI+ ++DVFVH I+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNAEKGFGFISPTDGSKDVFVHFSAIQNGG----FKTLEEGQKVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGQKGPAAANVT 68
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ + G+GFI+ ++DVFVH I+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNAEKGFGFISPTDGSKDVFVHFSAIQNGG----FKTLEEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGQKG 61
>gi|359300316|ref|ZP_09186155.1| cold shock-like protein CspC [Haemophilus [parainfluenzae] CCUG
13788]
gi|402306617|ref|ZP_10825658.1| cold-shock DNA-binding domain protein [Haemophilus sputorum HK
2154]
gi|400374572|gb|EJP27489.1| cold-shock DNA-binding domain protein [Haemophilus sputorum HK
2154]
Length = 70
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G VKWF+ G+GFIA EDVFVH I+ N Y+TL EG VEF++
Sbjct: 2 SKQTGTVKWFNATKGFGFIAPDQGGEDVFVHFSAIENNGG---YRTLEEGAKVEFEVQAS 58
Query: 92 DKGHEAINV 100
D+G A NV
Sbjct: 59 DRGASAANV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G VKWF+ G+GFIA EDVFVH I+ N Y+TL EG VEF++
Sbjct: 2 SKQTGTVKWFNATKGFGFIAPDQGGEDVFVHFSAIENNGG---YRTLEEGAKVEFEVQAS 58
Query: 259 DKG 261
D+G
Sbjct: 59 DRG 61
>gi|33593717|ref|NP_881361.1| cold-shock protein [Bordetella pertussis Tohama I]
gi|33597156|ref|NP_884799.1| cold-shock protein [Bordetella parapertussis 12822]
gi|33601000|ref|NP_888560.1| cold-shock protein [Bordetella bronchiseptica RB50]
gi|384205006|ref|YP_005590745.1| putative cold-shock protein [Bordetella pertussis CS]
gi|408414683|ref|YP_006625390.1| cold-shock protein [Bordetella pertussis 18323]
gi|410420801|ref|YP_006901250.1| cold-shock protein [Bordetella bronchiseptica MO149]
gi|410472561|ref|YP_006895842.1| cold-shock protein [Bordetella parapertussis Bpp5]
gi|412338815|ref|YP_006967570.1| cold-shock protein [Bordetella bronchiseptica 253]
gi|427815295|ref|ZP_18982359.1| putative cold-shock protein [Bordetella bronchiseptica 1289]
gi|427819567|ref|ZP_18986630.1| putative cold-shock protein [Bordetella bronchiseptica D445]
gi|427824963|ref|ZP_18992025.1| putative cold-shock protein [Bordetella bronchiseptica Bbr77]
gi|33563790|emb|CAE43032.1| putative cold-shock protein [Bordetella pertussis Tohama I]
gi|33566607|emb|CAE37865.1| putative cold-shock protein [Bordetella parapertussis]
gi|33575435|emb|CAE32513.1| putative cold-shock protein [Bordetella bronchiseptica RB50]
gi|332383120|gb|AEE67967.1| putative cold-shock protein [Bordetella pertussis CS]
gi|401776853|emb|CCJ62095.1| putative cold-shock protein [Bordetella pertussis 18323]
gi|408442671|emb|CCJ49229.1| putative cold-shock protein [Bordetella parapertussis Bpp5]
gi|408448096|emb|CCJ59775.1| putative cold-shock protein [Bordetella bronchiseptica MO149]
gi|408768649|emb|CCJ53417.1| putative cold-shock protein [Bordetella bronchiseptica 253]
gi|410566295|emb|CCN23856.1| putative cold-shock protein [Bordetella bronchiseptica 1289]
gi|410570567|emb|CCN18753.1| putative cold-shock protein [Bordetella bronchiseptica D445]
gi|410590228|emb|CCN05310.1| putative cold-shock protein [Bordetella bronchiseptica Bbr77]
Length = 81
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V F+I+QG
Sbjct: 15 KATGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVSFEIIQGP 70
Query: 93 KGHEAINVT 101
KG +A+N+T
Sbjct: 71 KGKQALNIT 79
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V F+I+QG
Sbjct: 15 KATGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVSFEIIQGP 70
Query: 260 KGNQ 263
KG Q
Sbjct: 71 KGKQ 74
>gi|304413830|ref|ZP_07395247.1| Cold shock protein [Candidatus Regiella insecticola LSR1]
gi|304283550|gb|EFL91945.1| Cold shock protein [Candidatus Regiella insecticola LSR1]
Length = 88
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ + +KTL EG+ VEFDI +G
Sbjct: 21 SKIKGSVKWFNEAKGFGFITPDDKSKDVFVHFSAIQGDG----FKTLGEGQQVEFDIEEG 76
Query: 92 DKGHEAINVT 101
KG AINV
Sbjct: 77 KKGPAAINVV 86
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ + +KTL EG+ VEFDI +G
Sbjct: 21 SKIKGSVKWFNEAKGFGFITPDDKSKDVFVHFSAIQGDG----FKTLGEGQQVEFDIEEG 76
Query: 259 DKG 261
KG
Sbjct: 77 KKG 79
>gi|210617492|ref|ZP_03291595.1| hypothetical protein CLONEX_03817 [Clostridium nexile DSM 1787]
gi|210149279|gb|EEA80288.1| hypothetical protein CLONEX_03817 [Clostridium nexile DSM 1787]
Length = 68
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF + G+GFI S +D+FVH I N +KTL EG+ V FD QG +G
Sbjct: 3 TGTVKWFDSQKGFGFITNEQSGKDIFVHFSGIALNG----FKTLEEGQQVSFDTTQGPRG 58
Query: 95 HEAINV 100
+A+NV
Sbjct: 59 EQAVNV 64
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF + G+GFI S +D+FVH I N +KTL EG+ V FD QG +G
Sbjct: 3 TGTVKWFDSQKGFGFITNEQSGKDIFVHFSGIALNG----FKTLEEGQQVSFDTTQGPRG 58
Query: 262 NQ 263
Q
Sbjct: 59 EQ 60
>gi|149190926|ref|ZP_01869189.1| putative Cold shock-like protein [Vibrio shilonii AK1]
gi|148835281|gb|EDL52255.1| putative Cold shock-like protein [Vibrio shilonii AK1]
Length = 70
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ KV G VKWF+ + G+GF+A + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKVNGTVKWFNEEKGFGFLAQENGGADVFVHFRAIASEG----FKTLAEGQKVSFEVE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A NV
Sbjct: 57 QGQKGLQAANVVA 69
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ KV G VKWF+ + G+GF+A + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKVNGTVKWFNEEKGFGFLAQENGGADVFVHFRAIASEG----FKTLAEGQKVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|221133721|ref|ZP_03560026.1| putative cold shock-like protein cspG [Glaciecola sp. HTCC2999]
Length = 69
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
++V G VKWF+ GYGFI + +DVFVH + I+ + YKTL EG+ V F+I +G
Sbjct: 2 SQVTGSVKWFNADKGYGFITQDNGGKDVFVHFRAIQ----SEGYKTLPEGQKVSFEIEEG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGLQAANV 66
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
++V G VKWF+ GYGFI + +DVFVH + I+ + YKTL EG+ V F+I +G
Sbjct: 2 SQVTGSVKWFNADKGYGFITQDNGGKDVFVHFRAIQ----SEGYKTLPEGQKVSFEIEEG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGLQ 62
>gi|209809774|ref|YP_002265313.1| cold shock-like protein CspG [Aliivibrio salmonicida LFI1238]
gi|208011337|emb|CAQ81788.1| cold shock-like protein CspG [Aliivibrio salmonicida LFI1238]
Length = 69
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++ QG
Sbjct: 2 SKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFEVEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGPQAANV 66
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++ QG
Sbjct: 2 SKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFEVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|126328607|ref|XP_001363469.1| PREDICTED: protein lin-28 homolog A [Monodelphis domestica]
Length = 205
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 17/133 (12%)
Query: 4 CDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE------ 57
C + AT A E P +P+ A G+ KWF+V+ G+GF++ +
Sbjct: 13 CAKAAEEAATGDAARAGEEP--QPLHGA----GICKWFNVRMGFGFLSMTARAGVALDQP 66
Query: 58 -DVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAAN 116
DVFVH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 67 VDVFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCLGSERRPK 122
Query: 117 KPKYNRRKAKANK 129
+R++K ++
Sbjct: 123 GKTLQKRRSKGDR 135
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Query: 171 CDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE------ 224
C + AT A E P +P+ A G+ KWF+V+ G+GF++ +
Sbjct: 13 CAKAAEEAATGDAARAGEEP--QPLHGA----GICKWFNVRMGFGFLSMTARAGVALDQP 66
Query: 225 -DVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
DVFVH ++ +++L EGE VEF + KG
Sbjct: 67 VDVFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 100
>gi|260583587|ref|ZP_05851335.1| cold shock protein [Granulicatella elegans ATCC 700633]
gi|260158213|gb|EEW93281.1| cold shock protein [Granulicatella elegans ATCC 700633]
Length = 70
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWFS + GYGFI+ ++ED+FVH I +KTL EG+ VEF+I QG G
Sbjct: 4 GIVKWFSNEKGYGFISVTDTDEDIFVHFTGIISEG----FKTLKEGQRVEFEIAQGAHGL 59
Query: 96 EAINVT 101
+A +V+
Sbjct: 60 QATHVS 65
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G+VKWFS + GYGFI+ ++ED+FVH I +KTL EG+ VEF+I QG G
Sbjct: 4 GIVKWFSNEKGYGFISVTDTDEDIFVHFTGIISEG----FKTLKEGQRVEFEIAQGAHGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|395652661|ref|ZP_10440511.1| putative cold-shock protein [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 104
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
K+ G VKWF+ GYGFI +ED+F H IK + YKTL G+ VEF+I+Q
Sbjct: 5 GVKISGKVKWFNNAKGYGFIVENGKSEDLFAHYSAIKMDG----YKTLKAGQHVEFEIIQ 60
Query: 91 GDKGHEAINV 100
G KG A+++
Sbjct: 61 GPKGLHAVDI 70
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
K+ G VKWF+ GYGFI +ED+F H IK + YKTL G+ VEF+I+Q
Sbjct: 5 GVKISGKVKWFNNAKGYGFIVENGKSEDLFAHYSAIKMDG----YKTLKAGQHVEFEIIQ 60
Query: 258 GDKG 261
G KG
Sbjct: 61 GPKG 64
>gi|67602636|ref|XP_666494.1| glycogen debranching enzyme [Cryptosporidium hominis TU502]
gi|54657499|gb|EAL36263.1| glycogen debranching enzyme [Cryptosporidium hominis]
Length = 127
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ GV KWF G+GFI +ED+FVH + IK +++LA+ E VE++I DK
Sbjct: 3 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEG----FRSLAQDERVEYEIETDDK 58
Query: 94 G-HEAINVTGPDGRHVQ 109
G +A+NV+GP+G V+
Sbjct: 59 GRRKAVNVSGPNGAPVK 75
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ GV KWF G+GFI +ED+FVH + IK +++LA+ E VE++I DK
Sbjct: 3 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEG----FRSLAQDERVEYEIETDDK 58
Query: 261 GNQ 263
G +
Sbjct: 59 GRR 61
>gi|297560234|ref|YP_003679208.1| cold-shock DNA-binding domain-containing protein [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296844682|gb|ADH66702.1| cold-shock DNA-binding domain protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 67
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI DVF H I+ N Y+ LAEG+ VEFD+ QG KG
Sbjct: 4 GKVKWFNGEKGFGFIEQDGGGPDVFAHYSAIQANG----YRELAEGQNVEFDVTQGAKGL 59
Query: 96 EAINVT 101
+A N+T
Sbjct: 60 QADNIT 65
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI DVF H I+ N Y+ LAEG+ VEFD+ QG KG
Sbjct: 4 GKVKWFNGEKGFGFIEQDGGGPDVFAHYSAIQANG----YRELAEGQNVEFDVTQGAKGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|451823005|ref|YP_007459279.1| CspA family beta-ribbon cold shock protein [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775805|gb|AGF46846.1| CspA family beta-ribbon cold shock protein [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 81
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI + E++F H I+ + ++TL EG+ V F+++QG
Sbjct: 15 KLTGTVKWFNDAKGFGFITPDNGGEEIFAHFSSIQMDG----FRTLKEGQKVSFEVIQGP 70
Query: 93 KGHEAINVTGP 103
KG +A+N+T P
Sbjct: 71 KGKQALNITKP 81
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI + E++F H I+ + ++TL EG+ V F+++QG
Sbjct: 15 KLTGTVKWFNDAKGFGFITPDNGGEEIFAHFSSIQMDG----FRTLKEGQKVSFEVIQGP 70
Query: 260 KGNQFCFVLK 269
KG Q + K
Sbjct: 71 KGKQALNITK 80
>gi|290475740|ref|YP_003468629.1| cold shock protein, transcription antiterminator, affects
expression of rpoS and uspA [Xenorhabdus bovienii
SS-2004]
gi|289175062|emb|CBJ81865.1| cold shock protein, transcription antiterminator, affects
expression of rpoS and uspA [Xenorhabdus bovienii
SS-2004]
Length = 69
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G+VKWF+ G+GFI ++DVFVH I + +KTL+EG+ VEF+I G
Sbjct: 3 KITGIVKWFNESKGFGFITPADGSKDVFVHFSAIMNDG----FKTLSEGQQVEFEIQNGP 58
Query: 93 KGHEAINVT 101
KG A NVT
Sbjct: 59 KGPAAANVT 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G+VKWF+ G+GFI ++DVFVH I + +KTL+EG+ VEF+I G
Sbjct: 3 KITGIVKWFNESKGFGFITPADGSKDVFVHFSAIMNDG----FKTLSEGQQVEFEIQNGP 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|304407201|ref|ZP_07388854.1| cold-shock DNA-binding domain protein [Paenibacillus
curdlanolyticus YK9]
gi|304343642|gb|EFM09483.1| cold-shock DNA-binding domain protein [Paenibacillus
curdlanolyticus YK9]
Length = 66
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
V G VKWF+ + G+GFI+ EDVFVH I+ + YK+L EG++VEF+I+QG++
Sbjct: 2 VTGTVKWFNAEKGFGFISV-EGGEDVFVHFSAIQGDG----YKSLDEGQSVEFNIVQGNR 56
Query: 94 GHEAINV 100
G +A NV
Sbjct: 57 GAQAENV 63
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
V G VKWF+ + G+GFI+ EDVFVH I+ + YK+L EG++VEF+I+QG++
Sbjct: 2 VTGTVKWFNAEKGFGFISV-EGGEDVFVHFSAIQGDG----YKSLDEGQSVEFNIVQGNR 56
Query: 261 GNQFCFVLK 269
G Q V+K
Sbjct: 57 GAQAENVVK 65
>gi|219125932|ref|XP_002183223.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405498|gb|EEC45441.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 91
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVVKWF G+GFI + DVFVH I+ +++LA+GE VE+ + + G
Sbjct: 8 GVVKWFDTMKGFGFIMPDDGSTDVFVHQTAIQTEG----FRSLADGEAVEYVVEEDSNGR 63
Query: 96 -EAINVTGPDGRHVQGSQF 113
+A+ VTGP G VQG+ F
Sbjct: 64 KKAVQVTGPGGEEVQGAPF 82
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 253
GVVKWF G+GFI + DVFVH I+ +++LA+GE VE+
Sbjct: 8 GVVKWFDTMKGFGFIMPDDGSTDVFVHQTAIQTEG----FRSLADGEAVEY 54
>gi|59714277|ref|YP_207052.1| DNA-binding transcriptional regulator [Vibrio fischeri ES114]
gi|197337532|ref|YP_002158749.1| hypothetical protein VFMJ11_A1204 [Vibrio fischeri MJ11]
gi|423688341|ref|ZP_17663144.1| hypothetical protein VFSR5_A1035 [Vibrio fischeri SR5]
gi|59482525|gb|AAW88164.1| DNA-binding transcriptional regulator [Vibrio fischeri ES114]
gi|197314784|gb|ACH64233.1| conserved domain protein [Vibrio fischeri MJ11]
gi|371492844|gb|EHN68450.1| hypothetical protein VFSR5_A1035 [Vibrio fischeri SR5]
Length = 69
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++ QG
Sbjct: 2 SKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFEVEQG 57
Query: 92 DKGHEAINVT 101
KG +A NV
Sbjct: 58 QKGPQAANVV 67
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++ QG
Sbjct: 2 SKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFEVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|170053777|ref|XP_001862831.1| RNA-binding protein lin-28 [Culex quinquefasciatus]
gi|167874140|gb|EDS37523.1| RNA-binding protein lin-28 [Culex quinquefasciatus]
Length = 181
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G KWF+V G+GFI +DVFVH ++ + +++L + E VEF+ DKG+
Sbjct: 26 GHCKWFNVIKGWGFITPDDGGQDVFVHQSVLQMDG----FRSLGQNEPVEFECKLTDKGY 81
Query: 96 EAINVTGPDGRHVQGSQFAANKPKYNRRKAK 126
EA V GP +GS+F +P+ R+ K
Sbjct: 82 EATRVFGPSQTQCKGSEF---RPRAKRKYRK 109
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G KWF+V G+GFI +DVFVH ++ + +++L + E VEF+ DKG
Sbjct: 26 GHCKWFNVIKGWGFITPDDGGQDVFVHQSVLQMDG----FRSLGQNEPVEFECKLTDKG 80
>gi|15595653|ref|NP_249147.1| cold-shock protein [Pseudomonas aeruginosa PAO1]
gi|107099440|ref|ZP_01363358.1| hypothetical protein PaerPA_01000452 [Pseudomonas aeruginosa
PACS2]
gi|116054185|ref|YP_788629.1| cold-shock protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|152984051|ref|YP_001345954.1| putative cold-shock protein [Pseudomonas aeruginosa PA7]
gi|218889196|ref|YP_002438060.1| putative cold-shock protein [Pseudomonas aeruginosa LESB58]
gi|254237314|ref|ZP_04930637.1| hypothetical protein PACG_03384 [Pseudomonas aeruginosa C3719]
gi|254243552|ref|ZP_04936874.1| hypothetical protein PA2G_04371 [Pseudomonas aeruginosa 2192]
gi|296386954|ref|ZP_06876453.1| putative cold-shock protein [Pseudomonas aeruginosa PAb1]
gi|313111918|ref|ZP_07797708.1| putative major cold shock protein [Pseudomonas aeruginosa 39016]
gi|355646785|ref|ZP_09054620.1| major cold shock protein cspA [Pseudomonas sp. 2_1_26]
gi|386056523|ref|YP_005973045.1| putative cold-shock protein [Pseudomonas aeruginosa M18]
gi|386068634|ref|YP_005983938.1| putative cold-shock protein [Pseudomonas aeruginosa NCGM2.S1]
gi|392981866|ref|YP_006480453.1| cold-shock protein [Pseudomonas aeruginosa DK2]
gi|416856303|ref|ZP_11911947.1| putative cold-shock protein [Pseudomonas aeruginosa 138244]
gi|416874978|ref|ZP_11918471.1| putative cold-shock protein [Pseudomonas aeruginosa 152504]
gi|418584976|ref|ZP_13149033.1| putative cold-shock protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418591718|ref|ZP_13155609.1| putative cold-shock protein [Pseudomonas aeruginosa MPAO1/P2]
gi|419755936|ref|ZP_14282288.1| putative cold-shock protein [Pseudomonas aeruginosa PADK2_CF510]
gi|420137037|ref|ZP_14645039.1| cold-shock protein [Pseudomonas aeruginosa CIG1]
gi|421151523|ref|ZP_15611135.1| cold-shock protein [Pseudomonas aeruginosa ATCC 14886]
gi|421157478|ref|ZP_15616846.1| cold-shock protein [Pseudomonas aeruginosa ATCC 25324]
gi|421165323|ref|ZP_15623658.1| cold-shock protein [Pseudomonas aeruginosa ATCC 700888]
gi|421172219|ref|ZP_15629995.1| cold-shock protein [Pseudomonas aeruginosa CI27]
gi|421178366|ref|ZP_15635980.1| cold-shock protein [Pseudomonas aeruginosa E2]
gi|421515072|ref|ZP_15961758.1| putative cold-shock protein [Pseudomonas aeruginosa PAO579]
gi|424943125|ref|ZP_18358888.1| probable cold-shock protein [Pseudomonas aeruginosa NCMG1179]
gi|451987569|ref|ZP_21935724.1| Cold shock protein CspE [Pseudomonas aeruginosa 18A]
gi|452881579|ref|ZP_21958305.1| cold-shock protein [Pseudomonas aeruginosa VRFPA01]
gi|9946316|gb|AAG03845.1|AE004483_3 probable cold-shock protein [Pseudomonas aeruginosa PAO1]
gi|115589406|gb|ABJ15421.1| putative major cold shock protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169245|gb|EAZ54756.1| hypothetical protein PACG_03384 [Pseudomonas aeruginosa C3719]
gi|126196930|gb|EAZ60993.1| hypothetical protein PA2G_04371 [Pseudomonas aeruginosa 2192]
gi|150959209|gb|ABR81234.1| probable cold-shock protein [Pseudomonas aeruginosa PA7]
gi|218769419|emb|CAW25179.1| probable cold-shock protein [Pseudomonas aeruginosa LESB58]
gi|310884210|gb|EFQ42804.1| putative major cold shock protein [Pseudomonas aeruginosa 39016]
gi|334842178|gb|EGM20791.1| putative cold-shock protein [Pseudomonas aeruginosa 138244]
gi|334842531|gb|EGM21137.1| putative cold-shock protein [Pseudomonas aeruginosa 152504]
gi|346059571|dbj|GAA19454.1| probable cold-shock protein [Pseudomonas aeruginosa NCMG1179]
gi|347302829|gb|AEO72943.1| putative cold-shock protein [Pseudomonas aeruginosa M18]
gi|348037193|dbj|BAK92553.1| putative cold-shock protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828324|gb|EHF12447.1| major cold shock protein cspA [Pseudomonas sp. 2_1_26]
gi|375045308|gb|EHS37894.1| putative cold-shock protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375049444|gb|EHS41940.1| putative cold-shock protein [Pseudomonas aeruginosa MPAO1/P2]
gi|384397598|gb|EIE44009.1| putative cold-shock protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392317371|gb|AFM62751.1| putative cold-shock protein [Pseudomonas aeruginosa DK2]
gi|403250213|gb|EJY63667.1| cold-shock protein [Pseudomonas aeruginosa CIG1]
gi|404348800|gb|EJZ75137.1| putative cold-shock protein [Pseudomonas aeruginosa PAO579]
gi|404527206|gb|EKA37379.1| cold-shock protein [Pseudomonas aeruginosa ATCC 14886]
gi|404538080|gb|EKA47637.1| cold-shock protein [Pseudomonas aeruginosa CI27]
gi|404542182|gb|EKA51512.1| cold-shock protein [Pseudomonas aeruginosa ATCC 700888]
gi|404548420|gb|EKA57371.1| cold-shock protein [Pseudomonas aeruginosa E2]
gi|404550582|gb|EKA59320.1| cold-shock protein [Pseudomonas aeruginosa ATCC 25324]
gi|451754719|emb|CCQ88247.1| Cold shock protein CspE [Pseudomonas aeruginosa 18A]
gi|452182239|gb|EME09257.1| cold-shock protein [Pseudomonas aeruginosa VRFPA01]
gi|453045834|gb|EME93552.1| cold-shock protein [Pseudomonas aeruginosa PA21_ST175]
Length = 69
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI TP S DVFVH + I+ N +KTLAEG+ V F+++QG KG
Sbjct: 6 GTVKWFNETKGYGFI-TPESGPDVFVHFRAIEGNG----FKTLAEGQKVSFEVVQGQKGM 60
Query: 96 EA 97
+A
Sbjct: 61 QA 62
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI TP S DVFVH + I+ N +KTLAEG+ V F+++QG KG
Sbjct: 6 GTVKWFNETKGYGFI-TPESGPDVFVHFRAIEGNG----FKTLAEGQKVSFEVVQGQKGM 60
Query: 263 Q 263
Q
Sbjct: 61 Q 61
>gi|380301971|ref|ZP_09851664.1| cold-shock DNA-binding protein family [Brachybacterium squillarum
M-6-3]
Length = 67
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI DVFVH +I + Y++L EG+ VEF++ QGDKG
Sbjct: 4 GSVKWFNAEKGYGFIEIDGGGADVFVHHSKIDMDG----YRSLDEGQRVEFEVTQGDKGP 59
Query: 96 EAINV 100
+A V
Sbjct: 60 QAEQV 64
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI DVFVH +I + Y++L EG+ VEF++ QGDKG
Sbjct: 4 GSVKWFNAEKGYGFIEIDGGGADVFVHHSKIDMDG----YRSLDEGQRVEFEVTQGDKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|332283953|ref|YP_004415864.1| cold-shock protein [Pusillimonas sp. T7-7]
gi|330427906|gb|AEC19240.1| cold-shock protein [Pusillimonas sp. T7-7]
Length = 80
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI + ED+F H I+ N +KTL EG+ V F+I QG
Sbjct: 14 KLTGTVKWFNDAKGFGFITPDNGGEDLFAHFSSIQMNG----FKTLKEGQKVAFEIAQGP 69
Query: 93 KGHEAINVTG 102
KG +A+N+T
Sbjct: 70 KGKQALNITA 79
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI + ED+F H I+ N +KTL EG+ V F+I QG
Sbjct: 14 KLTGTVKWFNDAKGFGFITPDNGGEDLFAHFSSIQMNG----FKTLKEGQKVAFEIAQGP 69
Query: 260 KGNQ 263
KG Q
Sbjct: 70 KGKQ 73
>gi|294470714|gb|ADE80749.1| cold shock domain protein 2 [Eutrema salsugineum]
Length = 201
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF + G+GFI + +D+FVH I+ + +++LA E+VEF++ + G
Sbjct: 14 GTVKWFDTQKGFGFITPDDAGDDLFVHQSSIRSDG----FRSLAADESVEFEVEMDNNGR 69
Query: 96 -EAINVTGPDGRHVQGS 111
+AI V+GPDG VQG+
Sbjct: 70 PKAIEVSGPDGAPVQGT 86
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF + G+GFI + +D+FVH I+ + +++LA E+VEF++ + G
Sbjct: 14 GTVKWFDTQKGFGFITPDDAGDDLFVHQSSIRSDG----FRSLAADESVEFEVEMDNNG 68
>gi|114330329|ref|YP_746551.1| cold-shock DNA-binding domain-containing protein [Nitrosomonas
eutropha C91]
gi|114307343|gb|ABI58586.1| cold shock protein E (CspE) [Nitrosomonas eutropha C91]
Length = 67
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF+ G+GFI +ED+F H I N +KTL EG+ V FD+ QG KG
Sbjct: 4 GIVKWFNDAKGFGFITPDDGSEDLFAHFSAISMNG----FKTLREGQRVSFDVTQGQKGK 59
Query: 96 EAINVTGP 103
+A N+ P
Sbjct: 60 QASNIQAP 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G+VKWF+ G+GFI +ED+F H I N +KTL EG+ V FD+ QG KG
Sbjct: 4 GIVKWFNDAKGFGFITPDDGSEDLFAHFSAISMNG----FKTLREGQRVSFDVTQGQKGK 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|15644617|ref|NP_229670.1| cold shock protein [Thermotoga maritima MSB8]
gi|148270057|ref|YP_001244517.1| cold-shock DNA-binding domain-containing protein [Thermotoga
petrophila RKU-1]
gi|170288741|ref|YP_001738979.1| cold-shock DNA-binding domain-containing protein [Thermotoga sp.
RQ2]
gi|281412062|ref|YP_003346141.1| cold-shock DNA-binding domain protein [Thermotoga naphthophila
RKU-10]
gi|418045937|ref|ZP_12684032.1| cold-shock DNA-binding domain protein [Thermotoga maritima MSB8]
gi|4982460|gb|AAD36936.1|AE001824_5 cold shock protein [Thermotoga maritima MSB8]
gi|147735601|gb|ABQ46941.1| cold-shock DNA-binding protein family [Thermotoga petrophila RKU-1]
gi|170176244|gb|ACB09296.1| cold-shock DNA-binding domain protein [Thermotoga sp. RQ2]
gi|281373165|gb|ADA66727.1| cold-shock DNA-binding domain protein [Thermotoga naphthophila
RKU-10]
gi|351676822|gb|EHA59975.1| cold-shock DNA-binding domain protein [Thermotoga maritima MSB8]
Length = 66
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI T + ED+FVH I+ + +KTL E ETVEF++ +G KG
Sbjct: 3 GTVKWFDSKKGYGFI-TMENGEDIFVHWSAIQMDG----FKTLRENETVEFEVQKGTKGP 57
Query: 96 EAINV 100
+A+NV
Sbjct: 58 QAVNV 62
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI T + ED+FVH I+ + +KTL E ETVEF++ +G KG
Sbjct: 3 GTVKWFDSKKGYGFI-TMENGEDIFVHWSAIQMDG----FKTLRENETVEFEVQKGTKGP 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|255078512|ref|XP_002502836.1| cold-shock protein with RNA binding domain [Micromonas sp. RCC299]
gi|226518102|gb|ACO64094.1| cold-shock protein with RNA binding domain [Micromonas sp. RCC299]
Length = 305
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 3 MCDSGTKAEATP-----SNPSANESPKKE-------PVVLATKVCGVVKWFSVKSGYGFI 50
M D AE TP SNP A + KE K GVV WF+V G+GF+
Sbjct: 1 MADEVATAEETPGAEEVSNPDAPAAESKEESNEPNDDAKTGVKYKGVVNWFNVAKGFGFV 60
Query: 51 ATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM-QGDKGHEAINVTGPDGRHVQ 109
DVFVH I +++L + E VEF++ GD ++A+ VTGPDG V+
Sbjct: 61 TRDDGVGDVFVHQSDIYAEG----FRSLRDQEPVEFELEPMGDGRYKAVKVTGPDGAFVR 116
Query: 110 GS 111
G+
Sbjct: 117 GA 118
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 170 MCDSGTKAEATP-----SNPSASESPKKE-------PVVLATKVCGVVKWFSVKSGYGFI 217
M D AE TP SNP A + KE K GVV WF+V G+GF+
Sbjct: 1 MADEVATAEETPGAEEVSNPDAPAAESKEESNEPNDDAKTGVKYKGVVNWFNVAKGFGFV 60
Query: 218 ATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
DVFVH I +++L + E VEF++
Sbjct: 61 TRDDGVGDVFVHQSDIYAEG----FRSLRDQEPVEFEL 94
>gi|209877068|ref|XP_002139976.1| cold-shock DNA-binding domain-containing protein [Cryptosporidium
muris RN66]
gi|209555582|gb|EEA05627.1| cold-shock DNA-binding domain-containing protein [Cryptosporidium
muris RN66]
Length = 119
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG- 94
GV KWF G+GFI +ED+FVH + IK + +++L + E VE+++ DKG
Sbjct: 5 GVCKWFDSAKGFGFITPDDGSEDIFVHQQNIKV----EGFRSLGQAERVEYEVETDDKGR 60
Query: 95 HEAINVTGPDGRHVQGS 111
+A+NV GP+G V+G
Sbjct: 61 RKAVNVCGPNGAAVKGD 77
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
GV KWF G+GFI +ED+FVH + IK + +++L + E VE+++ DKG
Sbjct: 5 GVCKWFDSAKGFGFITPDDGSEDIFVHQQNIKV----EGFRSLGQAERVEYEVETDDKG 59
>gi|192360440|ref|YP_001982658.1| cold shock protein-like protein [Cellvibrio japonicus Ueda107]
gi|190686605|gb|ACE84283.1| cold shock protein-related protein [Cellvibrio japonicus Ueda107]
Length = 78
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
V ++ G VKWF+ G+GFIA S +DVFVH I + +KTLAEG+ VEFD+
Sbjct: 9 VFMSRSTGTVKWFNESKGFGFIA-AESGQDVFVHYSAISGSG----FKTLAEGQRVEFDV 63
Query: 89 MQGDKGHEAINVT 101
G KG +A NVT
Sbjct: 64 KPGQKGPQAENVT 76
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
V ++ G VKWF+ G+GFIA S +DVFVH I + +KTLAEG+ VEFD+
Sbjct: 9 VFMSRSTGTVKWFNESKGFGFIA-AESGQDVFVHYSAISGSG----FKTLAEGQRVEFDV 63
Query: 256 MQGDKGNQ 263
G KG Q
Sbjct: 64 KPGQKGPQ 71
>gi|27366937|ref|NP_762464.1| cold shock protein [Vibrio vulnificus CMCP6]
gi|37676712|ref|NP_937108.1| cold shock protein [Vibrio vulnificus YJ016]
gi|320158815|ref|YP_004191193.1| cold shock protein CspG [Vibrio vulnificus MO6-24/O]
gi|27358504|gb|AAO07454.1|AE016809_216 Cold shock protein [Vibrio vulnificus CMCP6]
gi|37201255|dbj|BAC97078.1| cold shock protein [Vibrio vulnificus YJ016]
gi|319934127|gb|ADV88990.1| cold shock protein CspG [Vibrio vulnificus MO6-24/O]
Length = 70
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ KV G VKWF+ G+GFI+ + DVFVH I +KTLAEG+ V F++
Sbjct: 1 MSNKVTGSVKWFNETKGFGFISQDNGGNDVFVHFNSIVSTG----FKTLAEGQRVTFEVE 56
Query: 90 QGDKGHEAINVT 101
QG KG +A NVT
Sbjct: 57 QGKKGPQAANVT 68
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ KV G VKWF+ G+GFI+ + DVFVH I +KTLAEG+ V F++
Sbjct: 1 MSNKVTGSVKWFNETKGFGFISQDNGGNDVFVHFNSIVSTG----FKTLAEGQRVTFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGKKGPQ 63
>gi|407686951|ref|YP_006802124.1| hypothetical protein AMBAS45_05825 [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407699392|ref|YP_006824179.1| hypothetical protein AMBLS11_05680 [Alteromonas macleodii str.
'Black Sea 11']
gi|407248539|gb|AFT77724.1| hypothetical protein AMBLS11_05680 [Alteromonas macleodii str.
'Black Sea 11']
gi|407290331|gb|AFT94643.1| hypothetical protein AMBAS45_05825 [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 70
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ V G VKWF+ + G+GFI + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSVNGTVKWFNEEKGFGFITPEAGGKDVFVHFRSITSDG----FKTLAEGQAVSFEVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGPQAANV 67
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ V G VKWF+ + G+GFI + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSVNGTVKWFNEEKGFGFITPEAGGKDVFVHFRSITSDG----FKTLAEGQAVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|383786799|ref|YP_005471368.1| cold shock protein [Fervidobacterium pennivorans DSM 9078]
gi|383109646|gb|AFG35249.1| cold shock protein [Fervidobacterium pennivorans DSM 9078]
Length = 66
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI T ED+FVH I+ + +KTL EG+ VEFD+ G KG
Sbjct: 3 GTVKWFDAKKGYGFI-TKEDGEDIFVHFSAIQVDG----FKTLKEGDKVEFDVQNGAKGP 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QAANV 62
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI T ED+FVH I+ + +KTL EG+ VEFD+ G KG
Sbjct: 3 GTVKWFDAKKGYGFI-TKEDGEDIFVHFSAIQVDG----FKTLKEGDKVEFDVQNGAKGP 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|187935705|ref|YP_001885709.1| hypothetical protein CLL_A1515 [Clostridium botulinum B str. Eklund
17B]
gi|187723858|gb|ACD25079.1| conserved domain protein [Clostridium botulinum B str. Eklund 17B]
Length = 69
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF+ + GYGFI+ +DVF H +IK N P K L EGE+V FDI G+KG
Sbjct: 6 GIVKWFNAEKGYGFISC-DEGDDVFAHHSQIKENGPE---KDLHEGESVTFDIQDGEKGP 61
Query: 96 EAINV 100
A N+
Sbjct: 62 MATNI 66
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G+VKWF+ + GYGFI+ +DVF H +IK N P K L EGE+V FDI G+KG
Sbjct: 6 GIVKWFNAEKGYGFISC-DEGDDVFAHHSQIKENGPE---KDLHEGESVTFDIQDGEKG 60
>gi|398871737|ref|ZP_10627049.1| cold shock domain protein CspD [Pseudomonas sp. GM74]
gi|398205546|gb|EJM92327.1| cold shock domain protein CspD [Pseudomonas sp. GM74]
Length = 84
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI ED+F H IK + YKTL G+ V FDI+QG KG
Sbjct: 4 GKVKWFNNAKGYGFINEEGKTEDLFAHYSAIKMDG----YKTLKAGQAVVFDIIQGPKGL 59
Query: 96 EAINVTGPDGRHVQGSQFAANKPK 119
A+N+ P V S+ A P+
Sbjct: 60 HAVNIGNP----VDASKTATQLPE 79
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ GYGFI ED+F H IK + YKTL G+ V FDI+QG KG
Sbjct: 4 GKVKWFNNAKGYGFINEEGKTEDLFAHYSAIKMDG----YKTLKAGQAVVFDIIQGPKG 58
>gi|237727875|ref|ZP_04558356.1| major cold shock protein CSPA2 [Citrobacter sp. 30_2]
gi|365102054|ref|ZP_09332592.1| cold shock-like protein CspB [Citrobacter freundii 4_7_47CFAA]
gi|395230635|ref|ZP_10408938.1| major cold shock protein CSPA2 [Citrobacter sp. A1]
gi|421847873|ref|ZP_16281003.1| cold-shock DNA-binding domain-containing protein [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|424733345|ref|ZP_18161906.1| phosphotransferase system [Citrobacter sp. L17]
gi|226910432|gb|EEH96350.1| major cold shock protein CSPA2 [Citrobacter sp. 30_2]
gi|363646553|gb|EHL85795.1| cold shock-like protein CspB [Citrobacter freundii 4_7_47CFAA]
gi|394715719|gb|EJF21511.1| major cold shock protein CSPA2 [Citrobacter sp. A1]
gi|411770754|gb|EKS54503.1| cold-shock DNA-binding domain-containing protein [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|422892340|gb|EKU32202.1| phosphotransferase system [Citrobacter sp. L17]
gi|455644059|gb|EMF23173.1| cold-shock DNA-binding domain-containing protein [Citrobacter
freundii GTC 09479]
Length = 70
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ +KTL EG+ VEF +
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPQDGSKDVFVHFSAIQSND----FKTLDEGQKVEFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGAKGPSAVNVV 68
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ +KTL EG+ VEF +
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPQDGSKDVFVHFSAIQSND----FKTLDEGQKVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|114554895|ref|XP_513232.2| PREDICTED: protein lin-28 homolog A isoform 2 [Pan troglodytes]
Length = 209
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSS-------NEDVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF+ + + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLCMTARAGVALDPHRDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 138
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSS-------NEDVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF+ + + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLCMTARAGVALDPHRDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|111226121|ref|YP_716915.1| major cold shock protein, ssDNA-binding property [Frankia alni
ACN14a]
gi|392945837|ref|ZP_10311479.1| cold shock protein [Frankia sp. QA3]
gi|111153653|emb|CAJ65413.1| major cold shock protein, ssDNA-binding property [Frankia alni
ACN14a]
gi|392289131|gb|EIV95155.1| cold shock protein [Frankia sp. QA3]
Length = 67
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI+ DVFVH I + YK+L EG++V+F+I+QG KG
Sbjct: 4 GTVKWFNAEKGFGFISVDGGGPDVFVHYSSIVADG----YKSLDEGQSVQFEIVQGQKGP 59
Query: 96 EAINVT 101
+A NVT
Sbjct: 60 QADNVT 65
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI+ DVFVH I + YK+L EG++V+F+I+QG KG
Sbjct: 4 GTVKWFNAEKGFGFISVDGGGPDVFVHYSSIVADG----YKSLDEGQSVQFEIVQGQKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|49082304|gb|AAT50552.1| PA0456, partial [synthetic construct]
Length = 70
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI TP S DVFVH + I+ N +KTLAEG+ V F+++QG KG
Sbjct: 6 GTVKWFNETKGYGFI-TPESGPDVFVHFRAIEGNG----FKTLAEGQKVSFEVVQGQKGM 60
Query: 96 EA 97
+A
Sbjct: 61 QA 62
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI TP S DVFVH + I+ N +KTLAEG+ V F+++QG KG
Sbjct: 6 GTVKWFNETKGYGFI-TPESGPDVFVHFRAIEGNG----FKTLAEGQKVSFEVVQGQKGM 60
Query: 263 Q 263
Q
Sbjct: 61 Q 61
>gi|294142287|ref|YP_003558265.1| cold shock-like protein cspG [Shewanella violacea DSS12]
gi|22256741|sp|Q9S170.1|CSPG_SHEVD RecName: Full=Cold shock-like protein CspG
gi|5869509|dbj|BAA84218.1| CspG [Shewanella violacea]
gi|293328756|dbj|BAJ03487.1| cold shock-like protein cspG [Shewanella violacea DSS12]
Length = 70
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ G+VKWF+ + G+GFI + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSTTGLVKWFNEEKGFGFITQDNGGDDVFVHFRSITSDG----FKTLAEGQKVSFEVE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A NV
Sbjct: 57 QGQKGLQAANVVA 69
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ G+VKWF+ + G+GFI + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSTTGLVKWFNEEKGFGFITQDNGGDDVFVHFRSITSDG----FKTLAEGQKVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|336321112|ref|YP_004601080.1| cold-shock DNA-binding domain protein [[Cellvibrio] gilvus ATCC
13127]
gi|336104693|gb|AEI12512.1| cold-shock DNA-binding domain protein [[Cellvibrio] gilvus ATCC
13127]
Length = 67
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFIA DVFVH I Y+TL EG+ VEFDI QG KG
Sbjct: 4 GAVKWFNAEKGFGFIAQDGGGADVFVHYSAIDVQG----YRTLEEGQRVEFDITQGAKGP 59
Query: 96 EAINV 100
+A +V
Sbjct: 60 QAEHV 64
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFIA DVFVH I Y+TL EG+ VEFDI QG KG
Sbjct: 4 GAVKWFNAEKGFGFIAQDGGGADVFVHYSAIDVQG----YRTLEEGQRVEFDITQGAKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|30249291|ref|NP_841361.1| cold shock DNA-binding domain-containing protein [Nitrosomonas
europaea ATCC 19718]
gi|30180610|emb|CAD85223.1| Cold-shock DNA-binding domain [Nitrosomonas europaea ATCC 19718]
Length = 67
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
G VKWF+ G+GFI +ED+F H I N +KTL EG+ V FD+ QG K
Sbjct: 2 TTGTVKWFNDAKGFGFITPDDGSEDLFAHFSAINMNG----FKTLREGQKVSFDVTQGQK 57
Query: 94 GHEAINVTGP 103
G +A N+ P
Sbjct: 58 GKQASNIQAP 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
G VKWF+ G+GFI +ED+F H I N +KTL EG+ V FD+ QG K
Sbjct: 2 TTGTVKWFNDAKGFGFITPDDGSEDLFAHFSAINMNG----FKTLREGQKVSFDVTQGQK 57
Query: 261 GNQ 263
G Q
Sbjct: 58 GKQ 60
>gi|419126216|ref|ZP_13671105.1| cold shock protein CspC [Escherichia coli DEC5C]
gi|289152158|gb|ADC84009.1| cold shock-like protein [Escherichia coli]
gi|377976271|gb|EHV39582.1| cold shock protein CspC [Escherichia coli DEC5C]
Length = 69
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 38 VKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEA 97
VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G KG A
Sbjct: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQKGPAA 63
Query: 98 INVT 101
+NVT
Sbjct: 64 VNVT 67
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 205 VKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G KG
Sbjct: 8 VKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDGQKG 60
>gi|420376209|ref|ZP_14875992.1| cold shock-like protein CspG [Shigella flexneri 1235-66]
gi|391306373|gb|EIQ64130.1| cold shock-like protein CspG [Shigella flexneri 1235-66]
Length = 70
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ +KTL EG+ VEF +
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPQDGSKDVFVHFSAIQSND----FKTLDEGQKVEFSVE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPSAVNV 67
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N+ +KTL EG+ VEF +
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPQDGSKDVFVHFSAIQSND----FKTLDEGQKVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|343514681|ref|ZP_08751750.1| putative cold shock-like protein [Vibrio sp. N418]
gi|342799758|gb|EGU35315.1| putative cold shock-like protein [Vibrio sp. N418]
Length = 70
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ KV G VKWF+ G+GF+ + DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNKVTGSVKWFNETKGFGFLTQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFEVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGLQAANV 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ KV G VKWF+ G+GF+ + DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNKVTGSVKWFNETKGFGFLTQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|295698317|ref|YP_003602972.1| hypothetical protein RIEPE_0091 [Candidatus Riesia pediculicola
USDA]
gi|291157076|gb|ADD79521.1| conserved domain protein [Candidatus Riesia pediculicola USDA]
Length = 69
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI+ ++DVFVH I+ +KTL EG+ VEFD+ G
Sbjct: 2 SKIKGSVKWFNEAKGFGFISPEDGSKDVFVHFTSIQSEG----FKTLTEGQKVEFDVANG 57
Query: 92 DKGHEAINVT 101
+KG AINV
Sbjct: 58 EKGPSAINVV 67
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI+ ++DVFVH I+ +KTL EG+ VEFD+ G
Sbjct: 2 SKIKGSVKWFNEAKGFGFISPEDGSKDVFVHFTSIQSEG----FKTLTEGQKVEFDVANG 57
Query: 259 DKG 261
+KG
Sbjct: 58 EKG 60
>gi|152999996|ref|YP_001365677.1| cold-shock DNA-binding domain-containing protein [Shewanella
baltica OS185]
gi|160874617|ref|YP_001553933.1| cold-shock DNA-binding domain-containing protein [Shewanella
baltica OS195]
gi|217974041|ref|YP_002358792.1| cold-shock DNA-binding domain-containing protein [Shewanella
baltica OS223]
gi|373948867|ref|ZP_09608828.1| cold-shock DNA-binding domain protein [Shewanella baltica OS183]
gi|378707869|ref|YP_005272763.1| cold-shock protein [Shewanella baltica OS678]
gi|386325292|ref|YP_006021409.1| cold-shock protein [Shewanella baltica BA175]
gi|418023491|ref|ZP_12662476.1| cold-shock DNA-binding domain protein [Shewanella baltica OS625]
gi|151364614|gb|ABS07614.1| putative cold-shock DNA-binding domain protein [Shewanella baltica
OS185]
gi|160860139|gb|ABX48673.1| cold-shock DNA-binding domain protein [Shewanella baltica OS195]
gi|217499176|gb|ACK47369.1| cold-shock DNA-binding domain protein [Shewanella baltica OS223]
gi|315266858|gb|ADT93711.1| cold-shock DNA-binding domain protein [Shewanella baltica OS678]
gi|333819437|gb|AEG12103.1| cold-shock DNA-binding domain protein [Shewanella baltica BA175]
gi|353537374|gb|EHC06931.1| cold-shock DNA-binding domain protein [Shewanella baltica OS625]
gi|373885467|gb|EHQ14359.1| cold-shock DNA-binding domain protein [Shewanella baltica OS183]
Length = 69
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K GVVKWF+ G+GFI+ + D FVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKTTGVVKWFNEDKGFGFISPDNGGADAFVHFRAIVSEG----FKTLAEGQKVSFDIEQG 57
Query: 92 DKGHEAINVT 101
KG +A NV
Sbjct: 58 QKGPQAANVV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K GVVKWF+ G+GFI+ + D FVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKTTGVVKWFNEDKGFGFISPDNGGADAFVHFRAIVSEG----FKTLAEGQKVSFDIEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|397631500|gb|EJK70178.1| hypothetical protein THAOC_08484 [Thalassiosira oceanica]
Length = 120
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF + GYGFI ++DVFVH I +++LA+ E VEF I D+
Sbjct: 36 TGSVKWFDSEKGYGFIVPDDGSDDVFVHQTNINVEG----FRSLADDEQVEFRIEVDDRT 91
Query: 95 --HEAINVTGPDGRHVQGSQF 113
+A +VTGPDG V+G+ F
Sbjct: 92 GKRKATDVTGPDGADVKGAPF 112
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
G VKWF + GYGFI ++DVFVH I +++LA+ E VEF I D+
Sbjct: 36 TGSVKWFDSEKGYGFIVPDDGSDDVFVHQTNINVEG----FRSLADDEQVEFRIEVDDR 90
>gi|392550722|ref|ZP_10297859.1| cold shock protein [Pseudoalteromonas spongiae UST010723-006]
Length = 70
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ KV GVVKWF G+GFI+ +DVFVH + I+ +KTLAEG+ V F++
Sbjct: 1 MSNKVEGVVKWFDESKGFGFISQNDGGKDVFVHFRAIQSEG----FKTLAEGQAVSFEVE 56
Query: 90 QGDKGHEAINV 100
G KG +A NV
Sbjct: 57 DGQKGLQAANV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ KV GVVKWF G+GFI+ +DVFVH + I+ +KTLAEG+ V F++
Sbjct: 1 MSNKVEGVVKWFDESKGFGFISQNDGGKDVFVHFRAIQSEG----FKTLAEGQAVSFEVE 56
Query: 257 QGDKGNQ 263
G KG Q
Sbjct: 57 DGQKGLQ 63
>gi|345302101|ref|YP_004824003.1| cold-shock DNA-binding domain-containing protein [Rhodothermus
marinus SG0.5JP17-172]
gi|345111334|gb|AEN72166.1| cold-shock DNA-binding domain protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 95
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVVKWF K GYGFI P D+FVH +I + +KTL G+ VEF++ +G KG
Sbjct: 6 GVVKWFDAKKGYGFIIHPEGGADIFVHYSQI---ISERRFKTLRTGQIVEFELHEGPKGL 62
Query: 96 EAINVTGPD 104
A NV D
Sbjct: 63 HARNVVPLD 71
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
GVVKWF K GYGFI P D+FVH +I + +KTL G+ VEF++ +G KG
Sbjct: 6 GVVKWFDAKKGYGFIIHPEGGADIFVHYSQI---ISERRFKTLRTGQIVEFELHEGPKG 61
>gi|157105290|ref|XP_001648803.1| RNA-binding protein lin-28 [Aedes aegypti]
gi|108880147|gb|EAT44372.1| AAEL004259-PA, partial [Aedes aegypti]
Length = 157
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+ KWF+V G+GFI +DVFVH ++ +++L + E VEF+ DKG+
Sbjct: 3 GLCKWFNVIKGWGFITPDDGGQDVFVHQSVLQMEG----FRSLGQNEPVEFEAKLTDKGY 58
Query: 96 EAINVTGPDGRHVQGSQFAANKPKYNRRKAK 126
EA V GP +GS+F +P+ R+ K
Sbjct: 59 EATKVYGPSQSQCKGSEF---RPRAKRKYRK 86
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G+ KWF+V G+GFI +DVFVH ++ +++L + E VEF+ DKG
Sbjct: 3 GLCKWFNVIKGWGFITPDDGGQDVFVHQSVLQMEG----FRSLGQNEPVEFEAKLTDKG 57
>gi|188534694|ref|YP_001908491.1| Cold shock protein [Erwinia tasmaniensis Et1/99]
gi|259909319|ref|YP_002649675.1| Cold shock protein [Erwinia pyrifoliae Ep1/96]
gi|385787503|ref|YP_005818612.1| Cold shock protein [Erwinia sp. Ejp617]
gi|387872294|ref|YP_005803675.1| cold shock-like protein cspG (CPS-G) [Erwinia pyrifoliae DSM 12163]
gi|188029736|emb|CAO97615.1| Cold shock protein [Erwinia tasmaniensis Et1/99]
gi|224964941|emb|CAX56469.1| Cold shock protein [Erwinia pyrifoliae Ep1/96]
gi|283479388|emb|CAY75304.1| Cold shock-like protein cspG (CPS-G) [Erwinia pyrifoliae DSM 12163]
gi|310766775|gb|ADP11725.1| Cold shock protein [Erwinia sp. Ejp617]
Length = 70
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ + G+GFI+ ++DVFVH I+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNAEKGFGFISPTDGSKDVFVHFSAIQNGG----FKTLEEGQKVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGQKGPAAANVT 68
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ + G+GFI+ ++DVFVH I+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNAEKGFGFISPTDGSKDVFVHFSAIQNGG----FKTLEEGQKVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGQKG 61
>gi|54303445|ref|YP_133438.1| cold shock protein [Photobacterium profundum SS9]
gi|46916875|emb|CAG23638.1| putative cold shock protein [Photobacterium profundum SS9]
Length = 104
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ + G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++
Sbjct: 35 IMSNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFEVE 90
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 91 QGQKGLQAANV 101
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ + G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++
Sbjct: 35 IMSNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLAEGQKVSFEVE 90
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 91 QGQKGLQ 97
>gi|261821256|ref|YP_003259362.1| cold-shock protein [Pectobacterium wasabiae WPP163]
gi|421079013|ref|ZP_15539958.1| Cold shock protein CspD-like protein [Pectobacterium wasabiae CFBP
3304]
gi|261605269|gb|ACX87755.1| cold-shock DNA-binding domain protein [Pectobacterium wasabiae
WPP163]
gi|385871491|gb|AFI90011.1| Cold shock domain protein CspD [Pectobacterium sp. SCC3193]
gi|401706200|gb|EJS96378.1| Cold shock protein CspD-like protein [Pectobacterium wasabiae CFBP
3304]
Length = 73
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFI +D+F H I+ + Y+TL G+ V FD+ QG KGN
Sbjct: 4 GTVKWFNNAKGFGFICPEGGGDDIFAHYSTIQMDG----YRTLKAGQVVRFDVHQGPKGN 59
Query: 263 QFCFVLKNIV 272
C ++ IV
Sbjct: 60 HACLIVPQIV 69
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI +D+F H I+ + Y+TL G+ V FD+ QG KG+
Sbjct: 4 GTVKWFNNAKGFGFICPEGGGDDIFAHYSTIQMDG----YRTLKAGQVVRFDVHQGPKGN 59
Query: 96 EA 97
A
Sbjct: 60 HA 61
>gi|238755702|ref|ZP_04617036.1| Cold shock-like protein cspI [Yersinia ruckeri ATCC 29473]
gi|238706069|gb|EEP98452.1| Cold shock-like protein cspI [Yersinia ruckeri ATCC 29473]
Length = 66
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G+VKWF G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I QG K
Sbjct: 1 MTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSSD----FKTLDEGQNVEFSIEQGQK 56
Query: 94 GHEAINVT 101
G A+NV
Sbjct: 57 GPSAVNVV 64
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G+VKWF G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I QG K
Sbjct: 1 MTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSSD----FKTLDEGQNVEFSIEQGQK 56
Query: 261 G 261
G
Sbjct: 57 G 57
>gi|54309149|ref|YP_130169.1| cold shock-like protein [Photobacterium profundum SS9]
gi|90410345|ref|ZP_01218361.1| putative Cold shock-like protein [Photobacterium profundum 3TCK]
gi|46913581|emb|CAG20367.1| putative Cold shock-like protein [Photobacterium profundum SS9]
gi|90328586|gb|EAS44870.1| putative Cold shock-like protein [Photobacterium profundum 3TCK]
Length = 69
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I + +K+LAEG+ V FD+ QG
Sbjct: 2 SKTTGIVKWFNDEKGFGFITQDNGGADVFVHFRAITGDG----FKSLAEGQKVSFDVEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGPQAANV 66
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I + +K+LAEG+ V FD+ QG
Sbjct: 2 SKTTGIVKWFNDEKGFGFITQDNGGADVFVHFRAITGDG----FKSLAEGQKVSFDVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|339477737|ref|YP_004706557.1| putative cold shock-like protein CspD [Candidatus Moranella endobia
PCIT]
gi|338172288|gb|AEI74689.1| putative cold shock-like protein CspD [Candidatus Moranella endobia
PCIT]
Length = 69
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPTDGSKDVFVHFSAIQGNG----FKTLTEGQNVEFEIQDGQ 58
Query: 93 KGHEAINVT 101
KG A NVT
Sbjct: 59 KGPSAANVT 67
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPTDGSKDVFVHFSAIQGNG----FKTLTEGQNVEFEIQDGQ 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|428185247|gb|EKX54100.1| hypothetical protein GUITHDRAFT_91776 [Guillardia theta CCMP2712]
Length = 111
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 12/108 (11%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+VK GYGFI + ED+FVH I +++L E E VEF+I
Sbjct: 2 SKITGKVKWFNVKKGYGFITPTNGGEDIFVHQTAIHAEG----FRSLKEEEEVEFEISDN 57
Query: 92 DKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRRNNR 139
+AINVTGP G +VQG+ P++ K N R R R++N+
Sbjct: 58 GGKSKAINVTGPAGAYVQGA------PRHT--KGSRNYRPRNQRKDNK 97
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKL 241
+K+ G VKWF+VK GYGFI + ED+FVH I R L
Sbjct: 2 SKITGKVKWFNVKKGYGFITPTNGGEDIFVHQTAIHAEGFRSL 44
>gi|417538538|ref|ZP_12191099.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353666302|gb|EHD04157.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 70
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 90 QGDKGHEAINV 100
QG KG A+NV
Sbjct: 57 QGLKGPSAVNV 67
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGLKG 61
>gi|258620199|ref|ZP_05715238.1| cold shock transcriptional regulator [Vibrio mimicus VM573]
gi|258624440|ref|ZP_05719387.1| cold shock transcriptional regulator CspA [Vibrio mimicus VM603]
gi|262171708|ref|ZP_06039386.1| cold shock protein CspA [Vibrio mimicus MB-451]
gi|424807745|ref|ZP_18233147.1| cold shock transcriptional regulator CspA [Vibrio mimicus SX-4]
gi|258583287|gb|EEW08089.1| cold shock transcriptional regulator CspA [Vibrio mimicus VM603]
gi|258587557|gb|EEW12267.1| cold shock transcriptional regulator [Vibrio mimicus VM573]
gi|261892784|gb|EEY38770.1| cold shock protein CspA [Vibrio mimicus MB-451]
gi|342324282|gb|EGU20063.1| cold shock transcriptional regulator CspA [Vibrio mimicus SX-4]
Length = 70
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ G+GFI + D+FVH K I + +KTL+EG+ V F++
Sbjct: 1 MSNKTTGLVKWFNETKGFGFITPDNGGADLFVHFKSIVSDG----FKTLSEGQKVAFNVE 56
Query: 90 QGDKGHEAINVT 101
QG+KG +A NVT
Sbjct: 57 QGNKGPQAANVT 68
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ G+GFI + D+FVH K I + +KTL+EG+ V F++
Sbjct: 1 MSNKTTGLVKWFNETKGFGFITPDNGGADLFVHFKSIVSDG----FKTLSEGQKVAFNVE 56
Query: 257 QGDKGNQ 263
QG+KG Q
Sbjct: 57 QGNKGPQ 63
>gi|404369673|ref|ZP_10975006.1| hypothetical protein CSBG_03178 [Clostridium sp. 7_2_43FAA]
gi|226914351|gb|EEH99552.1| hypothetical protein CSBG_03178 [Clostridium sp. 7_2_43FAA]
Length = 69
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G VKW+S++ GYGFI+ N DVFVH +IK P K L EGE + FDI +
Sbjct: 2 SKYTGTVKWYSMEKGYGFISCNEGN-DVFVHHSQIKEKGPE---KDLHEGENITFDIQEN 57
Query: 92 DKGHEAINV 100
+KG A+NV
Sbjct: 58 EKGPMAVNV 66
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G VKW+S++ GYGFI+ N DVFVH +IK P K L EGE + FDI +
Sbjct: 2 SKYTGTVKWYSMEKGYGFISCNEGN-DVFVHHSQIKEKGPE---KDLHEGENITFDIQEN 57
Query: 259 DKG 261
+KG
Sbjct: 58 EKG 60
>gi|188025725|ref|ZP_02959593.2| hypothetical protein PROSTU_01464 [Providencia stuartii ATCC 25827]
gi|188020258|gb|EDU58298.1| cold-shock DNA-binding domain protein [Providencia stuartii ATCC
25827]
Length = 81
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
L +KV G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF+I
Sbjct: 12 LMSKVKGNVKWFNESKGFGFITPEDGSKDVFVHFSAI----ASEGFKTLAEGQKVEFEIT 67
Query: 90 QGDKGHEAINVT 101
+G KG A+NV
Sbjct: 68 EGAKGPSAVNVV 79
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
L +KV G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF+I
Sbjct: 12 LMSKVKGNVKWFNESKGFGFITPEDGSKDVFVHFSAI----ASEGFKTLAEGQKVEFEIT 67
Query: 257 QGDKG 261
+G KG
Sbjct: 68 EGAKG 72
>gi|440229823|ref|YP_007343616.1| cold shock protein [Serratia marcescens FGI94]
gi|440051528|gb|AGB81431.1| cold shock protein [Serratia marcescens FGI94]
Length = 69
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIVSNG----FKTLAEGQQVEFEITNG 57
Query: 92 DKGHEAINVT 101
KG A NVT
Sbjct: 58 AKGPSAANVT 67
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIVSNG----FKTLAEGQQVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|268315810|ref|YP_003289529.1| cold-shock DNA-binding domain-containing protein [Rhodothermus
marinus DSM 4252]
gi|262333344|gb|ACY47141.1| cold-shock DNA-binding domain protein [Rhodothermus marinus DSM
4252]
Length = 95
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVVKWF K GYGFI P D+FVH +I + +KTL G+ VEF++ +G KG
Sbjct: 6 GVVKWFDAKKGYGFIIHPEGGADIFVHYSQI---ISERRFKTLRTGQIVEFELHEGPKGL 62
Query: 96 EAINVTGPD 104
A NV D
Sbjct: 63 HARNVVPLD 71
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
GVVKWF K GYGFI P D+FVH +I + +KTL G+ VEF++ +G KG
Sbjct: 6 GVVKWFDAKKGYGFIIHPEGGADIFVHYSQI---ISERRFKTLRTGQIVEFELHEGPKG 61
>gi|127512097|ref|YP_001093294.1| cold-shock DNA-binding domain-containing protein [Shewanella
loihica PV-4]
gi|126637392|gb|ABO23035.1| cold-shock DNA-binding protein family [Shewanella loihica PV-4]
Length = 69
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+ G VKWF+ G+GFI + DVFVH + I + YKTLAEG+ V FDI QG
Sbjct: 2 SNTTGTVKWFNEDKGFGFIEQANGGADVFVHFRAIVSDG----YKTLAEGQKVTFDIEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGLQAANV 66
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+ G VKWF+ G+GFI + DVFVH + I + YKTLAEG+ V FDI QG
Sbjct: 2 SNTTGTVKWFNEDKGFGFIEQANGGADVFVHFRAIVSDG----YKTLAEGQKVTFDIEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGLQ 62
>gi|260775771|ref|ZP_05884667.1| putative cold-shock DNA-binding domain protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260608187|gb|EEX34356.1| putative cold-shock DNA-binding domain protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G VKWF+ G+GFIA + DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNKTTGSVKWFNETKGFGFIAPDNGTADVFVHFRSIASDG----FKTLAEGQKVAFNVE 56
Query: 90 QGDKGHEAINVT 101
QG KG +A +VT
Sbjct: 57 QGGKGPQAADVT 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G VKWF+ G+GFIA + DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNKTTGSVKWFNETKGFGFIAPDNGTADVFVHFRSIASDG----FKTLAEGQKVAFNVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGGKGPQ 63
>gi|147812546|emb|CAN68380.1| hypothetical protein VITISV_018906 [Vitis vinifera]
Length = 189
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWFS + G+GFIA ED+FVH I+ + ++TL+EGETVEF + G+ G
Sbjct: 9 GTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDG----FRTLSEGETVEFAVDHGEDGR 64
Query: 96 -EAINVTGPDGRHVQG 110
+A+ VT G + G
Sbjct: 65 TKAVEVTAVRGSYSSG 80
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWFS + G+GFIA ED+FVH I+ + ++TL+EGETVEF + G+ G
Sbjct: 9 GTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDG----FRTLSEGETVEFAVDHGEDG 63
>gi|158321031|ref|YP_001513538.1| cold-shock DNA-binding domain-containing protein [Alkaliphilus
oremlandii OhILAs]
gi|158141230|gb|ABW19542.1| cold-shock DNA-binding domain protein [Alkaliphilus oremlandii
OhILAs]
Length = 66
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI+ + +DVFVH I + +KTL EG+ V F+I+QGDKG
Sbjct: 4 GTVKWFNSEKGYGFISRENG-DDVFVHYSAITMDG----FKTLEEGQAVNFEIVQGDKGP 58
Query: 96 EAINVT 101
+A NVT
Sbjct: 59 QATNVT 64
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI+ + +DVFVH I + +KTL EG+ V F+I+QGDKG
Sbjct: 4 GTVKWFNSEKGYGFISRENG-DDVFVHYSAITMDG----FKTLEEGQAVNFEIVQGDKGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|421847828|ref|ZP_16280959.1| cold shock protein [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411770793|gb|EKS54536.1| cold shock protein [Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ + G+GFI ++DVFVH I+ N+ +KTL E + VEF +
Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLNENQEVEFSVE 56
Query: 90 QGDKGHEAINVT 101
QG KG A+NV
Sbjct: 57 QGPKGPSAVNVV 68
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ + G+GFI ++DVFVH I+ N+ +KTL E + VEF +
Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLNENQEVEFSVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGPKG 61
>gi|344995693|ref|YP_004798036.1| cold-shock DNA-binding domain-containing protein
[Caldicellulosiruptor lactoaceticus 6A]
gi|343963912|gb|AEM73059.1| cold-shock DNA-binding domain protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 66
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI + + EDVFVH I YKTLAEG+ VEFDI++ ++G+
Sbjct: 3 GRVKWFNPEKGYGFI-SADNGEDVFVHFSAINMEG----YKTLAEGQMVEFDIVKTERGN 57
Query: 96 EAINV 100
+A+NV
Sbjct: 58 QAMNV 62
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI + + EDVFVH I YKTLAEG+ VEFDI++ ++GN
Sbjct: 3 GRVKWFNPEKGYGFI-SADNGEDVFVHFSAINMEG----YKTLAEGQMVEFDIVKTERGN 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|448240925|ref|YP_007404978.1| DNA-binding transcriptional repressor [Serratia marcescens WW4]
gi|445211289|gb|AGE16959.1| DNA-binding transcriptional repressor [Serratia marcescens WW4]
gi|453062277|gb|EMF03268.1| cold shock protein CspE [Serratia marcescens VGH107]
Length = 69
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIVSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINVT 101
KG A NVT
Sbjct: 58 AKGPSAANVT 67
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIVSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|399889067|ref|ZP_10774944.1| Cold shock protein [Clostridium arbusti SL206]
Length = 65
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G VKWF+ + G+GFI T +DVFVH I+ + +K+L EGE VEFD+ QG K
Sbjct: 1 MLGNVKWFNAQKGFGFITTEDG-KDVFVHYSGIEESG----FKSLEEGEKVEFDLTQGQK 55
Query: 94 GHEAINV 100
G +A+NV
Sbjct: 56 GDQAVNV 62
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G VKWF+ + G+GFI T +DVFVH I+ + +K+L EGE VEFD+ QG K
Sbjct: 1 MLGNVKWFNAQKGFGFITTEDG-KDVFVHYSGIEESG----FKSLEEGEKVEFDLTQGQK 55
Query: 261 GNQ 263
G+Q
Sbjct: 56 GDQ 58
>gi|399116274|emb|CCG19079.1| cold shock-like protein [Taylorella asinigenitalis 14/45]
Length = 77
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
+ +V G VKWF+ G+GF+ SNED+F+H I+ + +KTL E + + F+I +
Sbjct: 8 SNRVVGTVKWFNDTKGFGFVTPEGSNEDLFIHFSSIQMDG----FKTLKENQKISFEITE 63
Query: 91 GDKGHEAINV 100
G KG +AIN+
Sbjct: 64 GPKGKQAINI 73
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
+ +V G VKWF+ G+GF+ SNED+F+H I+ + +KTL E + + F+I +
Sbjct: 8 SNRVVGTVKWFNDTKGFGFVTPEGSNEDLFIHFSSIQMDG----FKTLKENQKISFEITE 63
Query: 258 GDKGNQ 263
G KG Q
Sbjct: 64 GPKGKQ 69
>gi|348590413|ref|YP_004874875.1| cold-shock protein [Taylorella asinigenitalis MCE3]
gi|347974317|gb|AEP36852.1| cold-shock DNA-binding domain protein [Taylorella asinigenitalis
MCE3]
Length = 77
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
+ +V G VKWF+ G+GF+ SNED+F+H I+ + +KTL E + + F+I +
Sbjct: 8 SNRVIGTVKWFNDTKGFGFVTPEGSNEDLFIHFSSIQMDG----FKTLKENQKISFEITE 63
Query: 91 GDKGHEAINV 100
G KG +AIN+
Sbjct: 64 GPKGKQAINI 73
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
+ +V G VKWF+ G+GF+ SNED+F+H I+ + +KTL E + + F+I +
Sbjct: 8 SNRVIGTVKWFNDTKGFGFVTPEGSNEDLFIHFSSIQMDG----FKTLKENQKISFEITE 63
Query: 258 GDKGNQ 263
G KG Q
Sbjct: 64 GPKGKQ 69
>gi|293393437|ref|ZP_06637748.1| CspA family cold shock transcriptional regulator [Serratia
odorifera DSM 4582]
gi|291424038|gb|EFE97256.1| CspA family cold shock transcriptional regulator [Serratia
odorifera DSM 4582]
Length = 75
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 87
+ ++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF
Sbjct: 4 ISMSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFT 59
Query: 88 IMQGDKGHEAINVT 101
I G KG A NV
Sbjct: 60 IENGQKGPSAGNVV 73
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFD 254
+ ++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF
Sbjct: 4 ISMSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFT 59
Query: 255 IMQGDKG 261
I G KG
Sbjct: 60 IENGQKG 66
>gi|291615935|ref|YP_003518677.1| CspB [Pantoea ananatis LMG 20103]
gi|386018108|ref|YP_005936410.1| cold shock-like protein CspB [Pantoea ananatis AJ13355]
gi|291150965|gb|ADD75549.1| CspB [Pantoea ananatis LMG 20103]
gi|327396192|dbj|BAK13614.1| cold shock-like protein CspB [Pantoea ananatis AJ13355]
Length = 79
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++TK+ G+VKWF+ G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 10 MSTKMTGLVKWFNADKGFGFISPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 65
Query: 90 QGDKGHEAINV 100
G KG A NV
Sbjct: 66 NGPKGPSAGNV 76
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++TK+ G+VKWF+ G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 10 MSTKMTGLVKWFNADKGFGFISPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 65
Query: 257 QGDKG 261
G KG
Sbjct: 66 NGPKG 70
>gi|238796661|ref|ZP_04640167.1| Cold shock-like protein cspB [Yersinia mollaretii ATCC 43969]
gi|238719392|gb|EEQ11202.1| Cold shock-like protein cspB [Yersinia mollaretii ATCC 43969]
Length = 66
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G+VKWF G+GFI+ ++DVFVH I+ YKTL EG+ VEF I QG K
Sbjct: 1 MTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGTE----YKTLDEGQNVEFSIEQGQK 56
Query: 94 GHEAINVT 101
G A+NV
Sbjct: 57 GPSAVNVV 64
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G+VKWF G+GFI+ ++DVFVH I+ YKTL EG+ VEF I QG K
Sbjct: 1 MTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGTE----YKTLDEGQNVEFSIEQGQK 56
Query: 261 G 261
G
Sbjct: 57 G 57
>gi|402814769|ref|ZP_10864362.1| cold shock protein CspB [Paenibacillus alvei DSM 29]
gi|402507140|gb|EJW17662.1| cold shock protein CspB [Paenibacillus alvei DSM 29]
Length = 65
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI + EDVFVH I+ + +KTL EG+ VEFDI +G++G
Sbjct: 3 GTVKWFNAEKGYGFIQV-ENGEDVFVHFSAIQGDG----FKTLDEGQEVEFDITEGNRGA 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QAANV 62
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI + EDVFVH I+ + +KTL EG+ VEFDI +G++G
Sbjct: 3 GTVKWFNAEKGYGFIQV-ENGEDVFVHFSAIQGDG----FKTLDEGQEVEFDITEGNRGA 57
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 58 QAANVIK 64
>gi|290476206|ref|YP_003469106.1| RNA chaperone, transcription antiterminator, affects expression of
rpoS and uspA [Xenorhabdus bovienii SS-2004]
gi|289175539|emb|CBJ82342.1| RNA chaperone, transcription antiterminator, affects expression of
rpoS and uspA [Xenorhabdus bovienii SS-2004]
Length = 69
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITEG 57
Query: 92 DKGHEAINVT 101
KG A NV
Sbjct: 58 AKGPSAANVV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITEG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|374601539|ref|ZP_09674539.1| cold shock cspc [Paenibacillus dendritiformis C454]
gi|374392874|gb|EHQ64196.1| cold shock cspc [Paenibacillus dendritiformis C454]
Length = 65
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T N DVFVH I+ + +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIETAEGN-DVFVHFSAIQADG----FKTLEEGQEVEFDIVEGARGP 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QAANV 62
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T N DVFVH I+ + +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIETAEGN-DVFVHFSAIQADG----FKTLEEGQEVEFDIVEGARGP 57
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 58 QAANVIK 64
>gi|300856488|ref|YP_003781472.1| cold shock protein CspA [Clostridium ljungdahlii DSM 13528]
gi|300436603|gb|ADK16370.1| predicted cold shock protein CspA [Clostridium ljungdahlii DSM
13528]
Length = 67
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ + G+GFI P N DVFVH I+ + PR K L EG+ V+FD+ +G KG
Sbjct: 3 IGTVKWFNSEKGFGFIEVPGEN-DVFVHFTAIQSDEPR---KNLEEGQKVQFDVEEGPKG 58
Query: 95 HEAINVT 101
+A NV
Sbjct: 59 LQAANVV 65
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ + G+GFI P N DVFVH I+ + PR K L EG+ V+FD+ +G KG
Sbjct: 3 IGTVKWFNSEKGFGFIEVPGEN-DVFVHFTAIQSDEPR---KNLEEGQKVQFDVEEGPKG 58
Query: 262 NQFCFVLK 269
Q V+K
Sbjct: 59 LQAANVVK 66
>gi|91805295|gb|ABE65379.1| CspC [Escherichia coli]
Length = 69
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+ FI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFRFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+ FI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFRFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|197285535|ref|YP_002151407.1| cold shock-like protein [Proteus mirabilis HI4320]
gi|227356030|ref|ZP_03840421.1| cold shock family protein [Proteus mirabilis ATCC 29906]
gi|425068499|ref|ZP_18471615.1| cold shock-like protein CspC [Proteus mirabilis WGLW6]
gi|425072064|ref|ZP_18475170.1| cold shock-like protein CspC [Proteus mirabilis WGLW4]
gi|194683022|emb|CAR43496.1| cold shock-like protein [Proteus mirabilis HI4320]
gi|227163807|gb|EEI48715.1| cold shock family protein [Proteus mirabilis ATCC 29906]
gi|404597867|gb|EKA98360.1| cold shock-like protein CspC [Proteus mirabilis WGLW4]
gi|404599492|gb|EKA99946.1| cold shock-like protein CspC [Proteus mirabilis WGLW6]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 1 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAANVT 68
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 1 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|358051468|ref|ZP_09145667.1| CSD family cold shock protein [Staphylococcus simiae CCM 7213]
gi|357259074|gb|EHJ08932.1| CSD family cold shock protein [Staphylococcus simiae CCM 7213]
Length = 66
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI N DVFVH I + YK+L EG+ VEFDI++GD+G
Sbjct: 4 GTVKWFNAEKGFGFIEREDGN-DVFVHFSAIAEDG----YKSLEEGQKVEFDIVEGDRGE 58
Query: 96 EAINV 100
+A NV
Sbjct: 59 QAANV 63
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI N DVFVH I + YK+L EG+ VEFDI++GD+G
Sbjct: 4 GTVKWFNAEKGFGFIEREDGN-DVFVHFSAIAEDG----YKSLEEGQKVEFDIVEGDRGE 58
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 59 QAANVVK 65
>gi|293606230|ref|ZP_06688593.1| cold shock transcription regulator protein [Achromobacter
piechaudii ATCC 43553]
gi|359800514|ref|ZP_09303055.1| putative cold-shock protein [Achromobacter arsenitoxydans SY8]
gi|421486982|ref|ZP_15934512.1| cold-shock protein [Achromobacter piechaudii HLE]
gi|422317742|ref|ZP_16399041.1| cold-shock protein [Achromobacter xylosoxidans C54]
gi|423018746|ref|ZP_17009467.1| putative cold-shock protein [Achromobacter xylosoxidans AXX-A]
gi|292815377|gb|EFF74495.1| cold shock transcription regulator protein [Achromobacter
piechaudii ATCC 43553]
gi|317407692|gb|EFV87625.1| cold-shock protein [Achromobacter xylosoxidans C54]
gi|338778178|gb|EGP42657.1| putative cold-shock protein [Achromobacter xylosoxidans AXX-A]
gi|359361497|gb|EHK63253.1| putative cold-shock protein [Achromobacter arsenitoxydans SY8]
gi|400194707|gb|EJO27713.1| cold-shock protein [Achromobacter piechaudii HLE]
Length = 81
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V F+I+QG
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVAFEIIQGP 70
Query: 93 KGHEAINVTG 102
KG +A+N+T
Sbjct: 71 KGKQALNITA 80
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V F+I+QG
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVAFEIIQGP 70
Query: 260 KGNQ 263
KG Q
Sbjct: 71 KGKQ 74
>gi|163839238|ref|YP_001623643.1| cold shock protein [Renibacterium salmoninarum ATCC 33209]
gi|162952714|gb|ABY22229.1| cold shock protein [Renibacterium salmoninarum ATCC 33209]
Length = 67
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI DVFVH I+ + Y++L EG+ VEFDI QG KG
Sbjct: 4 GTVKWFNAEKGFGFITVDGDGGDVFVHWAAIEMDG----YRSLEEGQRVEFDIGQGQKGA 59
Query: 96 EAINVTG 102
+A V G
Sbjct: 60 QAEKVRG 66
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI DVFVH I+ + Y++L EG+ VEFDI QG KG
Sbjct: 4 GTVKWFNAEKGFGFITVDGDGGDVFVHWAAIEMDG----YRSLEEGQRVEFDIGQGQKGA 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|91792287|ref|YP_561938.1| cold-shock protein, DNA-binding [Shewanella denitrificans OS217]
gi|91714289|gb|ABE54215.1| cold-shock DNA-binding protein family [Shewanella denitrificans
OS217]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ G+GFI + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNEDKGFGFITPDNGGADVFVHFRSITSEG----FKTLAEGQKVSFEVE 56
Query: 90 QGDKGHEAINVT 101
QG KG +A NV+
Sbjct: 57 QGQKGPQAANVS 68
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ G+GFI + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNEDKGFGFITPDNGGADVFVHFRSITSEG----FKTLAEGQKVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|89073823|ref|ZP_01160330.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
gi|89050358|gb|EAR55859.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GF+ + DVFVH + I +KTL EG+ V FD+
Sbjct: 1 MSNKTLGLVKWFNEEKGFGFLTQDNGGADVFVHFRAIASEG----FKTLTEGQKVSFDVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGLQAANV 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GF+ + DVFVH + I +KTL EG+ V FD+
Sbjct: 1 MSNKTLGLVKWFNEEKGFGFLTQDNGGADVFVHFRAIASEG----FKTLTEGQKVSFDVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|71725897|gb|AAZ39067.1| cold shock protein [Exiguobacterium aurantiacum]
Length = 67
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF+++ G+GFI +DVFVH I+ + YK+L EG+ VEF+I+ G++G
Sbjct: 4 GIVKWFNLEKGFGFIEV-EGGKDVFVHFSAIQTDG----YKSLDEGQEVEFEIVDGERGP 58
Query: 96 EAINVTG 102
+A NVTG
Sbjct: 59 QAANVTG 65
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G+VKWF+++ G+GFI +DVFVH I+ + YK+L EG+ VEF+I+ G++G
Sbjct: 4 GIVKWFNLEKGFGFIEV-EGGKDVFVHFSAIQTDG----YKSLDEGQEVEFEIVDGERGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|359782304|ref|ZP_09285525.1| putative cold-shock protein [Pseudomonas psychrotolerans L19]
gi|359369571|gb|EHK70141.1| putative cold-shock protein [Pseudomonas psychrotolerans L19]
Length = 69
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ + G VKWF+ GYGFI TP S DVFVH + I+ K +KTLAEG+ V F+++
Sbjct: 1 MSNRQNGTVKWFNETKGYGFI-TPESGPDVFVHFRAIE----GKGFKTLAEGQKVSFEVV 55
Query: 90 QGDKGHEAINV 100
QG KG +A +V
Sbjct: 56 QGQKGMQAEHV 66
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ + G VKWF+ GYGFI TP S DVFVH + I+ K +KTLAEG+ V F+++
Sbjct: 1 MSNRQNGTVKWFNETKGYGFI-TPESGPDVFVHFRAIE----GKGFKTLAEGQKVSFEVV 55
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 56 QGQKGMQ 62
>gi|322831731|ref|YP_004211758.1| cold-shock protein [Rahnella sp. Y9602]
gi|383188979|ref|YP_005199107.1| cold shock protein [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|384256845|ref|YP_005400779.1| cold-shock protein [Rahnella aquatilis HX2]
gi|321166932|gb|ADW72631.1| cold-shock DNA-binding domain protein [Rahnella sp. Y9602]
gi|371587237|gb|AEX50967.1| cold shock protein [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|380752821|gb|AFE57212.1| cold-shock protein [Rahnella aquatilis HX2]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NV
Sbjct: 57 NGQKGPSAGNVV 68
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGQKG 61
>gi|317053824|ref|YP_004117849.1| cold-shock DNA-binding domain-containing protein [Pantoea sp.
At-9b]
gi|316951819|gb|ADU71293.1| cold-shock DNA-binding domain protein [Pantoea sp. At-9b]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ + G+GFI+ + ++DVFVH I+ + Y++L EG+ VEF +
Sbjct: 1 MSNKIRGTVKWFNSEKGFGFISPENGSKDVFVHYSAIQGTD----YRSLDEGQRVEFSVE 56
Query: 90 QGDKGHEAINVTG 102
G KG A+NV G
Sbjct: 57 DGQKGPSAVNVVG 69
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ + G+GFI+ + ++DVFVH I+ + Y++L EG+ VEF +
Sbjct: 1 MSNKIRGTVKWFNSEKGFGFISPENGSKDVFVHYSAIQGTD----YRSLDEGQRVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 DGQKG 61
>gi|341820299|emb|CCC56554.1| cspA family cold shock transcriptional regulator [Weissella
thailandensis fsh4-2]
Length = 75
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI+ S +DVFVH I+ + +K+L EG+ V F++ QGD+G
Sbjct: 13 GTVKWFNADKGYGFISR-ESGDDVFVHFSAIQSDG----FKSLEEGQAVSFEVQQGDRGL 67
Query: 96 EAINVT 101
+A NVT
Sbjct: 68 QAANVT 73
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI+ S +DVFVH I+ + +K+L EG+ V F++ QGD+G
Sbjct: 13 GTVKWFNADKGYGFISR-ESGDDVFVHFSAIQSDG----FKSLEEGQAVSFEVQQGDRGL 67
Query: 263 QFCFVLK 269
Q V K
Sbjct: 68 QAANVTK 74
>gi|308071085|ref|YP_003872690.1| cold-shock protein [Paenibacillus polymyxa E681]
gi|305860364|gb|ADM72152.1| Cold shock-like protein cspC [Paenibacillus polymyxa E681]
Length = 65
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T S DVFVH I+ +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIET-SDGGDVFVHFSAIQTEG----FKTLEEGQDVEFDIVEGARGP 57
Query: 96 EAINVT 101
+A NVT
Sbjct: 58 QAANVT 63
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T S DVFVH I+ +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIET-SDGGDVFVHFSAIQTEG----FKTLEEGQDVEFDIVEGARGP 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QAANVTK 64
>gi|54303515|ref|YP_133508.1| cold shock-like protein [Photobacterium profundum SS9]
gi|46916945|emb|CAG23708.1| putative Cold shock-like protein [Photobacterium profundum SS9]
Length = 69
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+ G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FD+ QG
Sbjct: 2 SNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIATEG----FKTLAEGQKVSFDVEQG 57
Query: 92 DKGHEAINVTG 102
KG +A NV
Sbjct: 58 QKGPQAANVVA 68
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+ G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FD+ QG
Sbjct: 2 SNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIATEG----FKTLAEGQKVSFDVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|291303552|ref|YP_003514830.1| cold-shock DNA-binding domain-containing protein [Stackebrandtia
nassauensis DSM 44728]
gi|290572772|gb|ADD45737.1| cold-shock DNA-binding domain protein [Stackebrandtia nassauensis
DSM 44728]
Length = 66
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGF+A EDVFVH I+ + Y++L +G+ VEFDI QG KG
Sbjct: 4 GSVKWFNAEKGYGFLAV-DGGEDVFVHFSAIQADG----YRSLEDGQRVEFDIAQGQKGP 58
Query: 96 EAINV 100
+A NV
Sbjct: 59 QAENV 63
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGF+A EDVFVH I+ + Y++L +G+ VEFDI QG KG
Sbjct: 4 GSVKWFNAEKGYGFLAV-DGGEDVFVHFSAIQADG----YRSLEDGQRVEFDIAQGQKGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|188534489|ref|YP_001908286.1| cold shock protein CspE [Erwinia tasmaniensis Et1/99]
gi|259909137|ref|YP_002649493.1| cold shock protein CspE [Erwinia pyrifoliae Ep1/96]
gi|292487595|ref|YP_003530467.1| cold shock-like protein CspE [Erwinia amylovora CFBP1430]
gi|292898834|ref|YP_003538203.1| cold shock-like protein [Erwinia amylovora ATCC 49946]
gi|300715812|ref|YP_003740615.1| Cold shock protein [Erwinia billingiae Eb661]
gi|385787690|ref|YP_005818799.1| Cold shock-like protein cspE (CSP-E) [Erwinia sp. Ejp617]
gi|428784530|ref|ZP_19002021.1| Cold shock-like protein cspE (CSP-E) [Erwinia amylovora ACW56400]
gi|188029531|emb|CAO97408.1| Putative cold shock-like protein [Erwinia tasmaniensis Et1/99]
gi|224964759|emb|CAX56276.1| similar to cold shock protein CspE [Erwinia pyrifoliae Ep1/96]
gi|291198682|emb|CBJ45791.1| cold shock-like protein [Erwinia amylovora ATCC 49946]
gi|291553014|emb|CBA20059.1| Cold shock-like protein cspE (CSP-E) [Erwinia amylovora CFBP1430]
gi|299061648|emb|CAX58764.1| Cold shock protein [Erwinia billingiae Eb661]
gi|310766962|gb|ADP11912.1| Cold shock-like protein cspE (CSP-E) [Erwinia sp. Ejp617]
gi|312171701|emb|CBX79959.1| Cold shock-like protein cspE (CSP-E) [Erwinia amylovora ATCC
BAA-2158]
gi|426276092|gb|EKV53819.1| Cold shock-like protein cspE (CSP-E) [Erwinia amylovora ACW56400]
Length = 69
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINVT 101
KG A NV
Sbjct: 58 AKGPSAANVA 67
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|217076694|ref|YP_002334410.1| hypothetical protein THA_582 [Thermosipho africanus TCF52B]
gi|419759450|ref|ZP_14285749.1| hypothetical protein H17ap60334_00677 [Thermosipho africanus
H17ap60334]
gi|217036547|gb|ACJ75069.1| conserved domain protein [Thermosipho africanus TCF52B]
gi|407515460|gb|EKF50205.1| hypothetical protein H17ap60334_00677 [Thermosipho africanus
H17ap60334]
Length = 65
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI T ED+FVH I+ + +KTL EG+ VEFD+ G KG
Sbjct: 3 GTVKWFDAKKGYGFI-TKEDGEDIFVHWSAIQTDG----FKTLKEGQEVEFDVQDGQKGP 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QAANV 62
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI T ED+FVH I+ + +KTL EG+ VEFD+ G KG
Sbjct: 3 GTVKWFDAKKGYGFI-TKEDGEDIFVHWSAIQTDG----FKTLKEGQEVEFDVQDGQKGP 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|161502877|ref|YP_001569989.1| hypothetical protein SARI_00934 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160864224|gb|ABX20847.1| hypothetical protein SARI_00934 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N+ ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FRTLNENQEVEFSVE 56
Query: 90 QGDKGHEAINV 100
QG KG A++V
Sbjct: 57 QGPKGPSAVDV 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N+ ++TL E + VEF +
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FRTLNENQEVEFSVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGPKG 61
>gi|90581342|ref|ZP_01237138.1| putative Cold shock-like protein [Photobacterium angustum S14]
gi|90437452|gb|EAS62647.1| putative Cold shock-like protein [Photobacterium angustum S14]
gi|119116583|dbj|BAF40852.1| cold-shock protein CspV [Photobacterium phosphoreum]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFEVE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A NV
Sbjct: 57 QGQKGLQAANVVA 69
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|402814029|ref|ZP_10863623.1| cold-shock DNA-binding domain protein [Paenibacillus alvei DSM 29]
gi|402507876|gb|EJW18397.1| cold-shock DNA-binding domain protein [Paenibacillus alvei DSM 29]
Length = 94
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T N DVFVH I+ +KTL EG++VEFDI++G +G
Sbjct: 32 GKVKWFNAEKGYGFIETAEGN-DVFVHFSAIQSEG----FKTLEEGQSVEFDIVEGARGP 86
Query: 96 EAINV 100
+A NV
Sbjct: 87 QAANV 91
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T N DVFVH I+ +KTL EG++VEFDI++G +G
Sbjct: 32 GKVKWFNAEKGYGFIETAEGN-DVFVHFSAIQSEG----FKTLEEGQSVEFDIVEGARGP 86
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 87 QAANVIK 93
>gi|261408402|ref|YP_003244643.1| cold-shock DNA-binding domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|315648512|ref|ZP_07901611.1| cold-shock DNA-binding domain protein [Paenibacillus vortex V453]
gi|329929384|ref|ZP_08283132.1| major cold shock protein CspA [Paenibacillus sp. HGF5]
gi|261284865|gb|ACX66836.1| cold-shock DNA-binding domain protein [Paenibacillus sp. Y412MC10]
gi|315276206|gb|EFU39552.1| cold-shock DNA-binding domain protein [Paenibacillus vortex V453]
gi|328936471|gb|EGG32916.1| major cold shock protein CspA [Paenibacillus sp. HGF5]
Length = 65
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI+ EDVFVH I+ + +K+L EG+ VEFDI +G++G
Sbjct: 3 GTVKWFNAEKGYGFISVEGG-EDVFVHFSAIQ----EEGFKSLEEGQAVEFDITEGNRGP 57
Query: 96 EAINVT 101
+A NVT
Sbjct: 58 QAANVT 63
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI+ EDVFVH I+ + +K+L EG+ VEFDI +G++G
Sbjct: 3 GTVKWFNAEKGYGFISVEGG-EDVFVHFSAIQ----EEGFKSLEEGQAVEFDITEGNRGP 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QAANVTK 64
>gi|291326366|ref|ZP_06124240.2| conserved domain protein [Providencia rettgeri DSM 1131]
gi|291314630|gb|EFE55083.1| conserved domain protein [Providencia rettgeri DSM 1131]
Length = 77
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 8 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQQVEFTIE 63
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 64 NGAKGPAAANVT 75
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 8 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQQVEFTIE 63
Query: 257 QGDKG 261
G KG
Sbjct: 64 NGAKG 68
>gi|395794380|ref|ZP_10473706.1| cold-shock DNA-binding domain-containing protein [Pseudomonas sp.
Ag1]
gi|421143933|ref|ZP_15603858.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas fluorescens BBc6R8]
gi|395341498|gb|EJF73313.1| cold-shock DNA-binding domain-containing protein [Pseudomonas sp.
Ag1]
gi|404504897|gb|EKA18942.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas fluorescens BBc6R8]
Length = 88
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
G VKWF+ GYGFI +D+F H I+ + YKTL G+ V FDI+QG K
Sbjct: 4 ASGKVKWFNNAKGYGFINEDDKTDDLFAHYSAIQMDG----YKTLKAGQPVSFDIIQGPK 59
Query: 94 GHEAINVTGP 103
G A+N++ P
Sbjct: 60 GLHAVNISAP 69
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
G VKWF+ GYGFI +D+F H I+ + YKTL G+ V FDI+QG K
Sbjct: 4 ASGKVKWFNNAKGYGFINEDDKTDDLFAHYSAIQMDG----YKTLKAGQPVSFDIIQGPK 59
Query: 261 G 261
G
Sbjct: 60 G 60
>gi|187478585|ref|YP_786609.1| cold shock-like protein [Bordetella avium 197N]
gi|115423171|emb|CAJ49702.1| cold shock-like protein [Bordetella avium 197N]
Length = 81
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V F+I+QG
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVSFEIIQGP 70
Query: 93 KGHEAINVT 101
KG +A+N+T
Sbjct: 71 KGKQALNIT 79
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V F+I+QG
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVSFEIIQGP 70
Query: 260 KGNQ 263
KG Q
Sbjct: 71 KGKQ 74
>gi|89076141|ref|ZP_01162499.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
gi|89048151|gb|EAR53735.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
Length = 69
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKSTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITGEG----FKTLAEGQKVAFDIEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGPQAANV 66
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKSTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITGEG----FKTLAEGQKVAFDIEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|390950063|ref|YP_006413822.1| cold shock protein [Thiocystis violascens DSM 198]
gi|390426632|gb|AFL73697.1| cold shock protein [Thiocystis violascens DSM 198]
Length = 67
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWFS + G+GFIA ++DVFVH ++ + +K+LAEG++V +D+ QG KG
Sbjct: 3 TGTVKWFSDEKGFGFIAPSDGSKDVFVHHSAVQGSG----FKSLAEGQSVSYDVEQGQKG 58
Query: 95 HEAINV 100
A NV
Sbjct: 59 PSATNV 64
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWFS + G+GFIA ++DVFVH ++ + +K+LAEG++V +D+ QG KG
Sbjct: 3 TGTVKWFSDEKGFGFIAPSDGSKDVFVHHSAVQGSG----FKSLAEGQSVSYDVEQGQKG 58
>gi|344337905|ref|ZP_08768838.1| cold-shock DNA-binding domain protein [Thiocapsa marina 5811]
gi|343801959|gb|EGV19900.1| cold-shock DNA-binding domain protein [Thiocapsa marina 5811]
Length = 67
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWFS + G+GFIA ++DVFVH ++ + +K+LAEG++V +D+ QG KG
Sbjct: 3 TGTVKWFSDEKGFGFIAPSDGSKDVFVHHSAVQGSG----FKSLAEGQSVSYDVEQGQKG 58
Query: 95 HEAINV 100
A NV
Sbjct: 59 PSATNV 64
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWFS + G+GFIA ++DVFVH ++ + +K+LAEG++V +D+ QG KG
Sbjct: 3 TGTVKWFSDEKGFGFIAPSDGSKDVFVHHSAVQGSG----FKSLAEGQSVSYDVEQGQKG 58
>gi|290474928|ref|YP_003467812.1| cold shock protein, transcription antiterminator, affects
expression of rpoS and uspA [Xenorhabdus bovienii
SS-2004]
gi|300722620|ref|YP_003711910.1| cold shock transcription antiterminator [Xenorhabdus nematophila
ATCC 19061]
gi|289174245|emb|CBJ81034.1| cold shock protein, transcription antiterminator, affects
expression of rpoS and uspA [Xenorhabdus bovienii
SS-2004]
gi|297629127|emb|CBJ89717.1| cold shock protein, transcription antiterminator, affects
expression of rpoS and uspA [Xenorhabdus nematophila
ATCC 19061]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 1 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAANVT 68
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 1 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|419923725|ref|ZP_14441651.1| cold shock protein [Escherichia coli 541-15]
gi|388392651|gb|EIL54063.1| cold shock protein [Escherichia coli 541-15]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ + G+GFI ++DVFVH I+ N+ +KTL E + VEF +
Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLNENQEVEFSVE 56
Query: 90 QGDKGHEAINVT 101
QG KG A+NV
Sbjct: 57 QGPKGPTAVNVV 68
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ + G+GFI ++DVFVH I+ N+ +KTL E + VEF +
Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLNENQEVEFSVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGPKG 61
>gi|291395012|ref|XP_002713966.1| PREDICTED: lin-28 homolog [Oryctolagus cuniculus]
Length = 203
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 20 NESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPR 72
E+P EP +L G+ KWF+V+ G+GF++ + DVFVH ++
Sbjct: 22 EEAPADEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPLVDVFVHQSKLHMEG-- 77
Query: 73 KLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
+++L EGE VEF + KG E+I VTGP G S+ +R++K +
Sbjct: 78 --FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCISSERRPKGKSMQKRRSKGGR 132
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 188 ESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRK 240
E+P EP +L G+ KWF+V+ G+GF++ + DVFVH ++
Sbjct: 23 EAPADEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPLVDVFVHQSKLHMEG--- 77
Query: 241 LYKTLAEGETVEFDIMQGDKG 261
+++L EGE VEF + KG
Sbjct: 78 -FRSLKEGEAVEFTFKKSAKG 97
>gi|292487397|ref|YP_003530269.1| cold shock-like protein CspG [Erwinia amylovora CFBP1430]
gi|292898644|ref|YP_003538013.1| cold shock protein [Erwinia amylovora ATCC 49946]
gi|428784331|ref|ZP_19001822.1| Cold shock-like protein cspG (CPS-G) [Erwinia amylovora ACW56400]
gi|291198492|emb|CBJ45600.1| cold shock protein [Erwinia amylovora ATCC 49946]
gi|291552816|emb|CBA19861.1| Cold shock-like protein cspG (CPS-G) [Erwinia amylovora CFBP1430]
gi|312171502|emb|CBX79760.1| Cold shock-like protein cspG (CPS-G) [Erwinia amylovora ATCC
BAA-2158]
gi|426275893|gb|EKV53620.1| Cold shock-like protein cspG (CPS-G) [Erwinia amylovora ACW56400]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWFS G+GFI+ ++DVFVH I+ +KTL EG+ VEF I
Sbjct: 1 MSDKMIGLVKWFSPDKGFGFISPTDGSKDVFVHFSAIQNGG----FKTLEEGQKVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGQKGPAAANVT 68
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWFS G+GFI+ ++DVFVH I+ +KTL EG+ VEF I
Sbjct: 1 MSDKMIGLVKWFSPDKGFGFISPTDGSKDVFVHFSAIQNGG----FKTLEEGQKVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGQKG 61
>gi|290476552|ref|YP_003469457.1| low-temperature-responsive gene, nucleic acid-binding domain
[Xenorhabdus bovienii SS-2004]
gi|289175890|emb|CBJ82693.1| low-temperature-responsive gene, nucleic acid-binding domain
[Xenorhabdus bovienii SS-2004]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPEDGSKDVFVHFSAIQGND----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A NV
Sbjct: 57 SGAKGPSAANV 67
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPEDGSKDVFVHFSAIQGND----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 SGAKG 61
>gi|317053579|ref|YP_004118713.1| cold-shock DNA-binding domain-containing protein [Pantoea sp.
At-9b]
gi|316952684|gb|ADU72157.1| cold-shock DNA-binding domain protein [Pantoea sp. At-9b]
Length = 70
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ + G GFI + ++DVFVH I+ N+ Y++L EG+ VEF +
Sbjct: 1 MSDKIHGTVKWFNAEKGLGFITPENGSKDVFVHFSAIQGND----YRSLDEGQRVEFILE 56
Query: 90 QGDKGHEAINVTG 102
G KG A N+TG
Sbjct: 57 NGQKGPAAANITG 69
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ + G GFI + ++DVFVH I+ N+ Y++L EG+ VEF +
Sbjct: 1 MSDKIHGTVKWFNAEKGLGFITPENGSKDVFVHFSAIQGND----YRSLDEGQRVEFILE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGQKG 61
>gi|284007198|emb|CBA72487.1| cold shock-like protein [Arsenophonus nasoniae]
Length = 111
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 42 MSDKMKGQVKWFNESKGFGFITPSDGSKDVFVHFSAIQGNG----FKTLAEGQNVEFTIE 97
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 98 DGSKGPAAANVT 109
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 42 MSDKMKGQVKWFNESKGFGFITPSDGSKDVFVHFSAIQGNG----FKTLAEGQNVEFTIE 97
Query: 257 QGDKG 261
G KG
Sbjct: 98 DGSKG 102
>gi|260102778|ref|ZP_05753015.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260083418|gb|EEW67538.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 67
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ G+GFI S N+DVFVH IK + +K+L EG+ V +D+ QG +G
Sbjct: 3 TGTVKWFNADKGFGFITGSSDNKDVFVHFSAIKTDG----FKSLEEGQKVSYDVEQGSRG 58
Query: 95 HEAINV 100
+A NV
Sbjct: 59 PQATNV 64
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ G+GFI S N+DVFVH IK + +K+L EG+ V +D+ QG +G
Sbjct: 3 TGTVKWFNADKGFGFITGSSDNKDVFVHFSAIKTDG----FKSLEEGQKVSYDVEQGSRG 58
Query: 262 NQ 263
Q
Sbjct: 59 PQ 60
>gi|443734748|gb|ELU18614.1| hypothetical protein CAPTEDRAFT_69814, partial [Capitella teleta]
Length = 60
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 29 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 86
V+++KV G VKW +V+ GYGFI + EDVFVH I NNP K +++ +GE EF
Sbjct: 3 VISSKVTGEVKWSNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKAEF 60
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 196 VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEF 253
V+++KV G VKW +V+ GYGFI + EDVFVH I NNP K +++ +GE EF
Sbjct: 3 VISSKVTGEVKWSNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKAEF 60
>gi|425734442|ref|ZP_18852761.1| cold shock protein [Brevibacterium casei S18]
gi|425481709|gb|EKU48868.1| cold shock protein [Brevibacterium casei S18]
Length = 67
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI +DVFVH I+ + Y++L EG+ VEF++ +G KG
Sbjct: 4 GTVKWFNAEKGYGFITLEGDGQDVFVHWSAIQMDG----YRSLEEGQQVEFEVGEGQKGP 59
Query: 96 EAINVT 101
+A +VT
Sbjct: 60 QAESVT 65
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI +DVFVH I+ + Y++L EG+ VEF++ +G KG
Sbjct: 4 GTVKWFNAEKGYGFITLEGDGQDVFVHWSAIQMDG----YRSLEEGQQVEFEVGEGQKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|398950402|ref|ZP_10673712.1| cold shock domain protein CspD [Pseudomonas sp. GM33]
gi|398158027|gb|EJM46390.1| cold shock domain protein CspD [Pseudomonas sp. GM33]
Length = 84
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ GYGFI ED+F H IK YKTL G+ V FDI+QG KG
Sbjct: 3 VGKVKWFNNAKGYGFINEEGKTEDLFAHYSAIKMEG----YKTLKAGQAVVFDIIQGPKG 58
Query: 95 HEAINVTGPDGRHVQGSQFAANKPK 119
A+N+ P V S+ A P+
Sbjct: 59 LHAVNIGNP----VDASKAATQSPE 79
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ GYGFI ED+F H IK YKTL G+ V FDI+QG KG
Sbjct: 3 VGKVKWFNNAKGYGFINEEGKTEDLFAHYSAIKMEG----YKTLKAGQAVVFDIIQGPKG 58
>gi|378768987|ref|YP_005197462.1| cold shock-like protein [Pantoea ananatis LMG 5342]
gi|386081080|ref|YP_005994605.1| cold-shock DNA-binding domain-containing protein CspB [Pantoea
ananatis PA13]
gi|354990261|gb|AER34385.1| cold-shock DNA-binding domain-containing protein CspB [Pantoea
ananatis PA13]
gi|365188475|emb|CCF11425.1| cold shock-like protein [Pantoea ananatis LMG 5342]
Length = 70
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++TK+ G+VKWF+ G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSTKMTGLVKWFNADKGFGFISPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NV
Sbjct: 57 NGPKGPSAGNVV 68
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++TK+ G+VKWF+ G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSTKMTGLVKWFNADKGFGFISPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGPKG 61
>gi|253990173|ref|YP_003041529.1| cold shock-like protein cspc (csp-c) [Photorhabdus asymbiotica]
gi|253781623|emb|CAQ84786.1| cold shock-like protein cspc (csp-c) [Photorhabdus asymbiotica]
Length = 70
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 1 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 SGAKGPAAANVT 68
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 1 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 SGAKG 61
>gi|27904911|ref|NP_778037.1| cold shock protein CspE [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|38372204|sp|Q89A90.3|CSPE_BUCBP RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|27904309|gb|AAO27142.1| cold shock protein CspA [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 69
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL+EG++VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLSEGQSVEFEITEG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL+EG++VEF+I +G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLSEGQSVEFEITEG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|90414568|ref|ZP_01222542.1| putative cold shock-like protein [Photobacterium profundum 3TCK]
gi|90414570|ref|ZP_01222544.1| putative cold shock-like protein [Photobacterium profundum 3TCK]
gi|90324375|gb|EAS40941.1| putative cold shock-like protein [Photobacterium profundum 3TCK]
gi|90324377|gb|EAS40943.1| putative cold shock-like protein [Photobacterium profundum 3TCK]
Length = 69
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+ G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FD+ QG
Sbjct: 2 SNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFDVEQG 57
Query: 92 DKGHEAINVTG 102
KG +A NV
Sbjct: 58 QKGPQAANVVA 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+ G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FD+ QG
Sbjct: 2 SNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFDVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|50120233|ref|YP_049400.1| cold shock protein CspE [Pectobacterium atrosepticum SCRI1043]
gi|227114408|ref|ZP_03828064.1| cold shock protein CspE [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227329730|ref|ZP_03833754.1| cold shock protein CspE [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|253687566|ref|YP_003016756.1| cold-shock DNA-binding domain-containing protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|261822402|ref|YP_003260508.1| cold shock protein CspE [Pectobacterium wasabiae WPP163]
gi|403057635|ref|YP_006645852.1| cold shock protein CspE [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|421083152|ref|ZP_15544031.1| Cold shock protein E (CspE) [Pectobacterium wasabiae CFBP 3304]
gi|49610759|emb|CAG74204.1| cold shock-like protein [Pectobacterium atrosepticum SCRI1043]
gi|251754144|gb|ACT12220.1| cold-shock DNA-binding domain protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|261606415|gb|ACX88901.1| cold-shock DNA-binding domain protein [Pectobacterium wasabiae
WPP163]
gi|385872711|gb|AFI91231.1| Cold shock-like protein cspE [Pectobacterium sp. SCC3193]
gi|401702378|gb|EJS92622.1| Cold shock protein E (CspE) [Pectobacterium wasabiae CFBP 3304]
gi|402804961|gb|AFR02599.1| cold shock protein CspE [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 69
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITDG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITDG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|324998904|ref|ZP_08120016.1| cold-shock DNA-binding domain-containing protein [Pseudonocardia
sp. P1]
Length = 67
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGF+A DVFVH I+ YKTL EG+ V FDI QG KG
Sbjct: 4 GTVKWFNSEKGYGFLAPDGGGADVFVHYSAIQTQG----YKTLDEGQRVSFDIEQGQKGP 59
Query: 96 EAINVT 101
+A VT
Sbjct: 60 QASGVT 65
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGF+A DVFVH I+ YKTL EG+ V FDI QG KG
Sbjct: 4 GTVKWFNSEKGYGFLAPDGGGADVFVHYSAIQTQG----YKTLDEGQRVSFDIEQGQKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|89075956|ref|ZP_01162328.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
gi|89048305|gb|EAR53884.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
Length = 70
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFEVE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A NV
Sbjct: 57 QGQKGLQAANVVA 69
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKTTGLVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|15616931|ref|NP_240144.1| cold shock-like protein CspC [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681685|ref|YP_002468071.1| cold shock-like protein CspC [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682240|ref|YP_002468624.1| cold shock-like protein CspC [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471376|ref|ZP_05635375.1| cold shock-like protein CspC [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|384226126|ref|YP_005617289.1| cold shock-like protein CspC [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384226640|ref|YP_005618391.1| cold shock-like protein CspC [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|384227183|ref|YP_005618933.1| cold shock-like protein CspC [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|414562680|ref|YP_005617871.1| cold shock-like protein CspC [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|11131708|sp|P57407.2|CSPC_BUCAI RecName: Full=Cold shock-like protein CspC; Short=CSP-C
gi|25296148|pir||F84967 cold shock-like protein cspC [imported] - Buchnera sp. (strain
APS)
gi|10038996|dbj|BAB13030.1| cold shock-like protein cspC [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219621973|gb|ACL30129.1| cold shock-like protein CspC [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624528|gb|ACL30683.1| cold shock-like protein CspC [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086059|gb|ADP66141.1| cold shock-like protein CspC [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086633|gb|ADP66714.1| cold shock-like protein CspC [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087216|gb|ADP67296.1| cold shock-like protein CspC [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087737|gb|ADP67816.1| cold shock-like protein CspC [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 69
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPSDGSKDVFVHFSSIQGNG----FKTLTEGQNVEFEIQDGQ 58
Query: 93 KGHEAINV 100
KG A+NV
Sbjct: 59 KGPAAVNV 66
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPSDGSKDVFVHFSSIQGNG----FKTLTEGQNVEFEIQDGQ 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|357420509|ref|YP_004933501.1| cold-shock DNA-binding protein family [Thermovirga lienii DSM
17291]
gi|355397975|gb|AER67404.1| cold-shock DNA-binding protein family [Thermovirga lienii DSM
17291]
Length = 65
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI + N DVFVH I+ + +KTL+EG+ VEF+++QG+KG
Sbjct: 3 GTVKWFNESKGYGFITSDEGN-DVFVHFSAIQMDG----FKTLSEGQRVEFEVVQGEKGP 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QAANV 62
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI + N DVFVH I+ + +KTL+EG+ VEF+++QG+KG
Sbjct: 3 GTVKWFNESKGYGFITSDEGN-DVFVHFSAIQMDG----FKTLSEGQRVEFEVVQGEKGP 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|348550115|ref|XP_003460878.1| PREDICTED: protein lin-28 homolog A-like [Cavia porcellus]
Length = 209
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 20/107 (18%)
Query: 36 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
G+ KWF+V+ G+GF++ + DVFVH ++ +++++L EGE VEF
Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EVFRSLKEGEAVEFTF 97
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSR 135
+ KG E+I VTGP G GS+ RR N +KR+S+
Sbjct: 98 KKSAKGLESIRVTGPGGVFCIGSE---------RRPKGKNMQKRRSK 135
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
G+ KWF+V+ G+GF++ + DVFVH ++ +++++L EGE VEF
Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EVFRSLKEGEAVEFTF 97
Query: 256 MQGDKG 261
+ KG
Sbjct: 98 KKSAKG 103
>gi|449145474|ref|ZP_21776279.1| cold-shock DNA-binding domain-containing protein [Vibrio mimicus
CAIM 602]
gi|449078815|gb|EMB49744.1| cold-shock DNA-binding domain-containing protein [Vibrio mimicus
CAIM 602]
Length = 70
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI S + DVFVH I + +KTL EG+ V F I
Sbjct: 1 MSNKLTGSVKWFNESKGFGFITPDSGSSDVFVHFNSIASDG----FKTLFEGQKVSFSIE 56
Query: 90 QGDKGHEAINV 100
QG KG +A+NV
Sbjct: 57 QGSKGPQAVNV 67
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI S + DVFVH I + +KTL EG+ V F I
Sbjct: 1 MSNKLTGSVKWFNESKGFGFITPDSGSSDVFVHFNSIASDG----FKTLFEGQKVSFSIE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGSKGPQ 63
>gi|374619703|ref|ZP_09692237.1| cold shock protein [gamma proteobacterium HIMB55]
gi|374302930|gb|EHQ57114.1| cold shock protein [gamma proteobacterium HIMB55]
Length = 71
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ + G VKWF+ G+GFI P ED+FVH + I+ +K+LAEGE VEF++
Sbjct: 1 MSDRCVGTVKWFNNAKGFGFITMPDRTEDIFVHFRAIEGEG----FKSLAEGEEVEFELA 56
Query: 90 QGDKGHEA 97
+G KG +A
Sbjct: 57 EGPKGLQA 64
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ + G VKWF+ G+GFI P ED+FVH + I+ +K+LAEGE VEF++
Sbjct: 1 MSDRCVGTVKWFNNAKGFGFITMPDRTEDIFVHFRAIEGEG----FKSLAEGEEVEFELA 56
Query: 257 QGDKGNQ 263
+G KG Q
Sbjct: 57 EGPKGLQ 63
>gi|358456364|ref|ZP_09166588.1| cold-shock DNA-binding domain protein [Frankia sp. CN3]
gi|357080540|gb|EHI89975.1| cold-shock DNA-binding domain protein [Frankia sp. CN3]
Length = 67
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI+ DVFVH I + YK+L EG+TV+F+I+QG KG
Sbjct: 4 GTVKWFNAEKGFGFISVDGGGPDVFVHFSAIMADG----YKSLDEGQTVQFEIVQGQKGP 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QADNV 64
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI+ DVFVH I + YK+L EG+TV+F+I+QG KG
Sbjct: 4 GTVKWFNAEKGFGFISVDGGGPDVFVHFSAIMADG----YKSLDEGQTVQFEIVQGQKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|326331965|ref|ZP_08198251.1| conserved domain protein [Nocardioidaceae bacterium Broad-1]
gi|325950278|gb|EGD42332.1| conserved domain protein [Nocardioidaceae bacterium Broad-1]
Length = 67
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFIA +DVFVH I+ YKTL E + VEFD+ QG KG
Sbjct: 4 GTVKWFNAEKGFGFIAQEDGGDDVFVHYSAIQTQG----YKTLDENQKVEFDVTQGPKGP 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAENV 64
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFIA +DVFVH I+ YKTL E + VEFD+ QG KG
Sbjct: 4 GTVKWFNAEKGFGFIAQEDGGDDVFVHYSAIQTQG----YKTLDENQKVEFDVTQGPKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|163856975|ref|YP_001631273.1| cold-shock protein [Bordetella petrii DSM 12804]
gi|163260703|emb|CAP43005.1| cold-shock protein [Bordetella petrii]
Length = 81
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V F+I+QG
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVAFEIIQGP 70
Query: 93 KGHEAINVT 101
KG +A+N+T
Sbjct: 71 KGKQALNIT 79
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V F+I+QG
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNG----FKTLKEGQKVAFEIIQGP 70
Query: 260 KGNQ 263
KG Q
Sbjct: 71 KGKQ 74
>gi|402574866|ref|YP_006624209.1| cold shock protein [Desulfosporosinus meridiei DSM 13257]
gi|402256063|gb|AFQ46338.1| cold shock protein [Desulfosporosinus meridiei DSM 13257]
Length = 65
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G VKWFS + GYGFI + +D+FVH + + + ++TL EG+ VEFD+MQG +
Sbjct: 1 MLGKVKWFSKQKGYGFIEQENG-QDIFVHFQSVVGDG----FRTLEEGQNVEFDVMQGPR 55
Query: 94 GHEAINVT 101
G +A NVT
Sbjct: 56 GEQASNVT 63
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G VKWFS + GYGFI + +D+FVH + + + ++TL EG+ VEFD+MQG +
Sbjct: 1 MLGKVKWFSKQKGYGFIEQENG-QDIFVHFQSVVGDG----FRTLEEGQNVEFDVMQGPR 55
Query: 261 GNQ 263
G Q
Sbjct: 56 GEQ 58
>gi|319790475|ref|YP_004152108.1| cold-shock DNA-binding domain protein [Thermovibrio ammonificans
HB-1]
gi|317114977|gb|ADU97467.1| cold-shock DNA-binding domain protein [Thermovibrio ammonificans
HB-1]
Length = 68
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF K GYGFI T + +DVFVH I ++TL EGE V F++M+ D
Sbjct: 3 KLTGTVKWFDSKKGYGFI-TADNGQDVFVHYTGINGEG----FRTLEEGERVSFNVMESD 57
Query: 93 KGHEAINV 100
KG +A++V
Sbjct: 58 KGLKAVDV 65
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF K GYGFI T + +DVFVH I ++TL EGE V F++M+ D
Sbjct: 3 KLTGTVKWFDSKKGYGFI-TADNGQDVFVHYTGINGEG----FRTLEEGERVSFNVMESD 57
Query: 260 KG 261
KG
Sbjct: 58 KG 59
>gi|410464813|ref|ZP_11318207.1| cold shock protein [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409982061|gb|EKO38556.1| cold shock protein [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 68
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWFS K GYGFI +DVFVH I+ + ++TL EGE V F+I+QG++G
Sbjct: 5 GTVKWFSDKKGYGFIMR-DGEDDVFVHYSSIEGDG----FRTLREGEQVTFEILQGERGP 59
Query: 96 EAINVTGP 103
+A NV P
Sbjct: 60 KAANVVRP 67
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWFS K GYGFI +DVFVH I+ + ++TL EGE V F+I+QG++G
Sbjct: 5 GTVKWFSDKKGYGFIMR-DGEDDVFVHYSSIEGDG----FRTLREGEQVTFEILQGERGP 59
Query: 263 QFCFVLK 269
+ V++
Sbjct: 60 KAANVVR 66
>gi|387891236|ref|YP_006321534.1| cold shock-like protein CspG [Escherichia blattae DSM 4481]
gi|414595062|ref|ZP_11444693.1| putative cold shock-like protein [Escherichia blattae NBRC 105725]
gi|386926069|gb|AFJ49023.1| cold shock-like protein CspG [Escherichia blattae DSM 4481]
gi|403193982|dbj|GAB82345.1| putative cold shock-like protein [Escherichia blattae NBRC 105725]
Length = 70
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ +N ++TL EG+ VEF I
Sbjct: 1 MSDKMTGLVKWFNADKGFGFISPADGSKDVFVHFSAIQSDN----FRTLEEGQKVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NV
Sbjct: 57 NGAKGPAAANVV 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ +N ++TL EG+ VEF I
Sbjct: 1 MSDKMTGLVKWFNADKGFGFISPADGSKDVFVHFSAIQSDN----FRTLEEGQKVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|251790554|ref|YP_003005275.1| cold shock protein CspE [Dickeya zeae Ech1591]
gi|271499690|ref|YP_003332715.1| cold-shock DNA-binding domain-containing protein [Dickeya dadantii
Ech586]
gi|307130032|ref|YP_003882048.1| DNA-binding transcriptional repressor [Dickeya dadantii 3937]
gi|354598560|ref|ZP_09016577.1| cold-shock DNA-binding domain protein [Brenneria sp. EniD312]
gi|247539175|gb|ACT07796.1| cold-shock DNA-binding domain protein [Dickeya zeae Ech1591]
gi|270343245|gb|ACZ76010.1| cold-shock DNA-binding domain protein [Dickeya dadantii Ech586]
gi|306527561|gb|ADM97491.1| DNA-binding transcriptional repressor [Dickeya dadantii 3937]
gi|353676495|gb|EHD22528.1| cold-shock DNA-binding domain protein [Brenneria sp. EniD312]
Length = 69
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITSG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITSG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|331007546|ref|ZP_08330704.1| Cold shock protein CspC [gamma proteobacterium IMCC1989]
gi|330418644|gb|EGG93152.1| Cold shock protein CspC [gamma proteobacterium IMCC1989]
Length = 78
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI+ + +ED+FVH + I+ Y++L EG++VEF + +GDKG
Sbjct: 15 GTVKWFNNSRGYGFISCEAKSEDIFVHYRNIQSEG----YRSLNEGQSVEFSLAEGDKGL 70
Query: 96 EAINV 100
+A V
Sbjct: 71 QAEEV 75
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI+ + +ED+FVH + I+ Y++L EG++VEF + +GDKG
Sbjct: 15 GTVKWFNNSRGYGFISCEAKSEDIFVHYRNIQSEG----YRSLNEGQSVEFSLAEGDKGL 70
Query: 263 Q 263
Q
Sbjct: 71 Q 71
>gi|212709456|ref|ZP_03317584.1| hypothetical protein PROVALCAL_00497 [Providencia alcalifaciens DSM
30120]
gi|261344215|ref|ZP_05971859.1| conserved domain protein [Providencia rustigianii DSM 4541]
gi|422008175|ref|ZP_16355160.1| cold shock transcription antiterminator [Providencia rettgeri
Dmel1]
gi|422018603|ref|ZP_16365160.1| cold shock transcription antiterminator [Providencia alcalifaciens
Dmel2]
gi|212687794|gb|EEB47322.1| hypothetical protein PROVALCAL_00497 [Providencia alcalifaciens DSM
30120]
gi|282567812|gb|EFB73347.1| conserved domain protein [Providencia rustigianii DSM 4541]
gi|414096310|gb|EKT57969.1| cold shock transcription antiterminator [Providencia rettgeri
Dmel1]
gi|414104895|gb|EKT66460.1| cold shock transcription antiterminator [Providencia alcalifaciens
Dmel2]
Length = 70
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 1 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQQVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAANVT 68
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF I
Sbjct: 1 MSDKMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNG----FKTLAEGQQVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|304407680|ref|ZP_07389331.1| cold-shock DNA-binding domain protein [Paenibacillus
curdlanolyticus YK9]
gi|304343163|gb|EFM09006.1| cold-shock DNA-binding domain protein [Paenibacillus
curdlanolyticus YK9]
Length = 65
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T DVFVH I+ + +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIETEQGG-DVFVHFSAIQADG----FKTLEEGQAVEFDIVEGARGP 57
Query: 96 EAINVT 101
+A NVT
Sbjct: 58 QAANVT 63
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T DVFVH I+ + +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIETEQGG-DVFVHFSAIQADG----FKTLEEGQAVEFDIVEGARGP 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QAANVTK 64
>gi|163785452|ref|ZP_02180056.1| cold-shock DNA-binding domain protein [Hydrogenivirga sp.
128-5-R1-1]
gi|159879278|gb|EDP73178.1| cold-shock DNA-binding domain protein [Hydrogenivirga sp.
128-5-R1-1]
Length = 69
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF K G+GFI + ED+FVH I +K L EGE VEF+++Q +KG
Sbjct: 4 TGTVKWFDSKKGFGFITREDTGEDIFVHFSAINGQG----FKNLEEGEKVEFEVVQDEKG 59
Query: 95 HEAINVT 101
A NVT
Sbjct: 60 FRAANVT 66
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF K G+GFI + ED+FVH I +K L EGE VEF+++Q +KG
Sbjct: 4 TGTVKWFDSKKGFGFITREDTGEDIFVHFSAINGQG----FKNLEEGEKVEFEVVQDEKG 59
>gi|427661213|ref|ZP_18956682.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414053536|gb|EKT35524.1| cold shock-like protein CspC [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
Length = 69
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
K+ G VKWF+ G+G I ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGCITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 92 DKGHEAINVT 101
KG A+NVT
Sbjct: 58 QKGPAAVNVT 67
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
K+ G VKWF+ G+G I ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 AKIKGQVKWFNESKGFGCITPADGSKDVFVHFSAIQGNG----FKTLAEGQNVEFEIQDG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|381210141|ref|ZP_09917212.1| cold shock protein [Lentibacillus sp. Grbi]
Length = 66
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVVKWF+ + GYGFI N DVFVH I+ + +KTL EG+ V FDI++G++G
Sbjct: 4 GVVKWFNAEKGYGFIQVEEGN-DVFVHYSAIQ----EEGFKTLEEGQNVTFDIVEGERGP 58
Query: 96 EAINVT 101
+A NV
Sbjct: 59 QAANVV 64
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
GVVKWF+ + GYGFI N DVFVH I+ + +KTL EG+ V FDI++G++G
Sbjct: 4 GVVKWFNAEKGYGFIQVEEGN-DVFVHYSAIQ----EEGFKTLEEGQNVTFDIVEGERGP 58
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 59 QAANVVK 65
>gi|154248732|ref|YP_001409557.1| cold-shock DNA-binding domain-containing protein [Fervidobacterium
nodosum Rt17-B1]
gi|154152668|gb|ABS59900.1| putative cold-shock DNA-binding domain protein [Fervidobacterium
nodosum Rt17-B1]
Length = 66
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI T ED+FVH I+ YKTL EG+ VEF++ G KG
Sbjct: 3 GTVKWFDAKKGYGFI-TKEDGEDIFVHYSAIQAEG----YKTLKEGDKVEFEVQNGQKGP 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QAANV 62
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI T ED+FVH I+ YKTL EG+ VEF++ G KG
Sbjct: 3 GTVKWFDAKKGYGFI-TKEDGEDIFVHYSAIQAEG----YKTLKEGDKVEFEVQNGQKGP 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|157372097|ref|YP_001480086.1| cold-shock DNA-binding domain-containing protein [Serratia
proteamaculans 568]
gi|157323861|gb|ABV42958.1| cold-shock DNA-binding domain protein [Serratia proteamaculans 568]
Length = 70
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPSAVNV 67
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|319778247|ref|YP_004129160.1| cold-shock protein [Taylorella equigenitalis MCE9]
gi|397662031|ref|YP_006502731.1| cold shock-like protein [Taylorella equigenitalis ATCC 35865]
gi|317108271|gb|ADU91017.1| cold-shock DNA-binding domain protein [Taylorella equigenitalis
MCE9]
gi|394350210|gb|AFN36124.1| cold shock-like protein [Taylorella equigenitalis ATCC 35865]
gi|399114770|emb|CCG17566.1| cold shock-like protein [Taylorella equigenitalis 14/56]
Length = 76
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
+ +V G VKWF+ G+GF+ SNED+F+H I+ +KTL E + + F+I +
Sbjct: 8 SNRVTGTVKWFNDTKGFGFVTPEGSNEDLFIHFSSIQMEG----FKTLKENQKISFEITE 63
Query: 91 GDKGHEAINV 100
G KG +AIN+
Sbjct: 64 GPKGKQAINI 73
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
+ +V G VKWF+ G+GF+ SNED+F+H I+ +KTL E + + F+I +
Sbjct: 8 SNRVTGTVKWFNDTKGFGFVTPEGSNEDLFIHFSSIQMEG----FKTLKENQKISFEITE 63
Query: 258 GDKGNQ 263
G KG Q
Sbjct: 64 GPKGKQ 69
>gi|317493995|ref|ZP_07952411.1| cold-shock' DNA-binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|365835230|ref|ZP_09376657.1| cold shock protein [Hafnia alvei ATCC 51873]
gi|316917768|gb|EFV39111.1| cold-shock' DNA-binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|364566742|gb|EHM44422.1| cold shock protein [Hafnia alvei ATCC 51873]
Length = 70
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ ++ YK+L EG++VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPADGSKDVFVHFSAIQSDS----YKSLDEGQSVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NV
Sbjct: 57 NGAKGPAAANVV 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ ++ YK+L EG++VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPADGSKDVFVHFSAIQSDS----YKSLDEGQSVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|363418471|gb|AEW23224.1| Lin28 [Bubalus bubalis]
Length = 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 6 SGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 58
+G +A P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCVKAQEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
VFVH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGK 123
Query: 119 KYNRRKAKANK 129
+R++K ++
Sbjct: 124 NMQKRRSKGDR 134
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 173 SGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 225
+G +A P + +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCVKAQEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
VFVH ++ +++L EGE VEF + KG
Sbjct: 68 VFVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 99
>gi|257068250|ref|YP_003154505.1| cold-shock DNA-binding protein family [Brachybacterium faecium DSM
4810]
gi|386774401|ref|ZP_10096779.1| cold-shock DNA-binding protein family [Brachybacterium
paraconglomeratum LC44]
gi|256559068|gb|ACU84915.1| cold-shock DNA-binding protein family [Brachybacterium faecium DSM
4810]
Length = 67
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI DVFVH +I + Y+ L EG+ VEF++ QGDKG
Sbjct: 4 GSVKWFNAEKGYGFIEIDGGGADVFVHHSKIDMDG----YRALDEGQRVEFEVSQGDKGP 59
Query: 96 EAINV 100
+A V
Sbjct: 60 QAEQV 64
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI DVFVH +I + Y+ L EG+ VEF++ QGDKG
Sbjct: 4 GSVKWFNAEKGYGFIEIDGGGADVFVHHSKIDMDG----YRALDEGQRVEFEVSQGDKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|355673251|ref|ZP_09058848.1| hypothetical protein HMPREF9469_01885 [Clostridium citroniae
WAL-17108]
gi|354814717|gb|EHE99316.1| hypothetical protein HMPREF9469_01885 [Clostridium citroniae
WAL-17108]
Length = 67
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI + ED+FVH I N +K+L +G++V FDI G++G
Sbjct: 4 GTVKWFNSQKGFGFITNAENGEDIFVHYSGIASNG----FKSLEDGQSVTFDITNGNRGL 59
Query: 96 EAINV 100
+A+NV
Sbjct: 60 QAVNV 64
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI + ED+FVH I N +K+L +G++V FDI G++G
Sbjct: 4 GTVKWFNSQKGFGFITNAENGEDIFVHYSGIASNG----FKSLEDGQSVTFDITNGNRGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|384227757|ref|YP_005619502.1| cold shock-like protein CspC [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538697|gb|AEO08674.1| cold shock-like protein CspC [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 69
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPSDGSKDVFVHFSSIQGNG----FKTLTEGQNVEFEIQDGQ 58
Query: 93 KGHEAINV 100
KG A+NV
Sbjct: 59 KGPAAVNV 66
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I+ N +KTL EG+ VEF+I G
Sbjct: 3 KIKGQVKWFNESKGFGFITPSDGSKDVFVHFSSIQGNG----FKTLTEGQNVEFEIQDGQ 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|339007030|ref|ZP_08639605.1| cold shock-like protein CspC [Brevibacillus laterosporus LMG 15441]
gi|421874835|ref|ZP_16306435.1| cold shock protein CspB [Brevibacillus laterosporus GI-9]
gi|338776239|gb|EGP35767.1| cold shock-like protein CspC [Brevibacillus laterosporus LMG 15441]
gi|372456179|emb|CCF15984.1| cold shock protein CspB [Brevibacillus laterosporus GI-9]
Length = 65
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI +DVFVH I+ +K+L EG+TVEFDI++GD+G
Sbjct: 3 GKVKWFNAEKGFGFIER-DGGDDVFVHFSAIQSEG----FKSLDEGQTVEFDIVEGDRGP 57
Query: 96 EAINVT 101
+A NVT
Sbjct: 58 QAANVT 63
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI +DVFVH I+ +K+L EG+TVEFDI++GD+G
Sbjct: 3 GKVKWFNAEKGFGFIER-DGGDDVFVHFSAIQSEG----FKSLDEGQTVEFDIVEGDRGP 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QAANVTK 64
>gi|386317897|ref|YP_006014061.1| Major cold-shock protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|408402530|ref|YP_006860494.1| putative cold shock protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|417751727|ref|ZP_12399995.1| major cold shock protein CspA [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|417927246|ref|ZP_12570634.1| cold-shock DNA-binding domain protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|422759969|ref|ZP_16813731.1| Major cold-shock protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322412804|gb|EFY03712.1| Major cold-shock protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|323128184|gb|ADX25481.1| Major cold-shock protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333772488|gb|EGL49333.1| major cold shock protein CspA [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|340765120|gb|EGR87646.1| cold-shock DNA-binding domain protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|407968759|dbj|BAM61997.1| putative cold shock protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 67
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI+T + +DVF H I+ N +KTL EG+ VEFD+ +G +G
Sbjct: 4 GTVKWFNAEKGFGFIST-ENGQDVFAHFSAIQTNG----FKTLEEGQKVEFDVEEGQRGP 58
Query: 96 EAINVT 101
+A+N+T
Sbjct: 59 QAVNIT 64
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI+T + +DVF H I+ N +KTL EG+ VEFD+ +G +G
Sbjct: 4 GTVKWFNAEKGFGFIST-ENGQDVFAHFSAIQTNG----FKTLEEGQKVEFDVEEGQRGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|254508069|ref|ZP_05120196.1| putative 'Cold-shock' DNA-binding domain [Vibrio parahaemolyticus
16]
gi|323496408|ref|ZP_08101466.1| cold-shock protein, DNA-binding [Vibrio sinaloensis DSM 21326]
gi|219549036|gb|EED26034.1| putative 'Cold-shock' DNA-binding domain [Vibrio parahaemolyticus
16]
gi|323318685|gb|EGA71638.1| cold-shock protein, DNA-binding [Vibrio sinaloensis DSM 21326]
Length = 70
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKTTGTVKWFNEEKGFGFITQENGGADVFVHFRAITGEG----FKTLAEGQKVAFEVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGPQAANV 67
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++
Sbjct: 1 MSNKTTGTVKWFNEEKGFGFITQENGGADVFVHFRAITGEG----FKTLAEGQKVAFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|74272681|gb|ABA01136.1| putative nucleic acid-binding protein, partial [Chlamydomonas
incerta]
Length = 226
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI ED+FVH I +++L EGE VEF++ G G
Sbjct: 9 GTVKWFNATKGFGFITPGGGGEDLFVHQTNINSEG----FRSLREGEAVEFEVEAGPDGR 64
Query: 96 -EAINVTGPDGRHVQGS 111
+A+NVTGP G +G+
Sbjct: 65 SKAVNVTGPAGAAPEGA 81
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ G+GFI ED+FVH I +++L EGE VEF++ G G
Sbjct: 9 GTVKWFNATKGFGFITPGGGGEDLFVHQTNINSEG----FRSLREGEAVEFEVEAGPDG 63
>gi|392330175|ref|ZP_10274791.1| Major cold-shock protein [Streptococcus canis FSL Z3-227]
gi|391420047|gb|EIQ82858.1| Major cold-shock protein [Streptococcus canis FSL Z3-227]
Length = 67
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI+T + +DVF H I+ N +KTL EG+ VEFD+ +G +G
Sbjct: 4 GTVKWFNAEKGFGFIST-ENGQDVFAHFSAIQTNG----FKTLEEGQKVEFDVEEGQRGP 58
Query: 96 EAINVT 101
+A+N+T
Sbjct: 59 QAVNIT 64
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI+T + +DVF H I+ N +KTL EG+ VEFD+ +G +G
Sbjct: 4 GTVKWFNAEKGFGFIST-ENGQDVFAHFSAIQTNG----FKTLEEGQKVEFDVEEGQRGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|261251826|ref|ZP_05944400.1| cold shock protein CspA [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417953843|ref|ZP_12596885.1| cold-shock DNA-binding domain-containing protein [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260938699|gb|EEX94687.1| cold shock protein CspA [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342816488|gb|EGU51385.1| cold-shock DNA-binding domain-containing protein [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 70
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GFI + DVFVH + I + +KTL EG+ V F++
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFITPENGGADVFVHFRAITSDG----FKTLKEGQQVSFEVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGPQAANV 67
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GFI + DVFVH + I + +KTL EG+ V F++
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFITPENGGADVFVHFRAITSDG----FKTLKEGQQVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|444379057|ref|ZP_21178242.1| Cold shock protein CspA [Enterovibrio sp. AK16]
gi|443676894|gb|ELT83590.1| Cold shock protein CspA [Enterovibrio sp. AK16]
Length = 70
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF G+GFI + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSDKSTGLVKWFDETKGFGFITQDNGGKDVFVHFRAIVSDG----FKTLAEGQKVRFNVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGPQATNV 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF G+GFI + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSDKSTGLVKWFDETKGFGFITQDNGGKDVFVHFRAIVSDG----FKTLAEGQKVRFNVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|429766999|ref|ZP_19299223.1| major cold shock protein CspA [Clostridium celatum DSM 1785]
gi|429182172|gb|EKY23292.1| major cold shock protein CspA [Clostridium celatum DSM 1785]
Length = 75
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G +KWF+ + GYGFI+ + N D+FVH ++K N P + L EGE V F I G+KG
Sbjct: 12 GTIKWFNTEKGYGFISANNGN-DIFVHQSQVKDNGP---HSDLHEGENVSFSIADGEKGP 67
Query: 96 EAINV 100
AINV
Sbjct: 68 MAINV 72
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G +KWF+ + GYGFI+ + N D+FVH ++K N P + L EGE V F I G+KG
Sbjct: 12 GTIKWFNTEKGYGFISANNGN-DIFVHQSQVKDNGP---HSDLHEGENVSFSIADGEKG 66
>gi|303246711|ref|ZP_07332989.1| cold-shock DNA-binding domain protein [Desulfovibrio fructosovorans
JJ]
gi|302492051|gb|EFL51929.1| cold-shock DNA-binding domain protein [Desulfovibrio fructosovorans
JJ]
Length = 68
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWFS K GYGFI +DVFVH I+ ++TL EGE V+FDI+QG++G
Sbjct: 5 GTVKWFSDKKGYGFIMR-EGEDDVFVHYSSIEGEG----FRTLREGELVQFDIIQGERGP 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 KATNV 64
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWFS K GYGFI +DVFVH I+ ++TL EGE V+FDI+QG++G
Sbjct: 5 GTVKWFSDKKGYGFIMR-EGEDDVFVHYSSIEGEG----FRTLREGELVQFDIIQGERGP 59
Query: 263 QFCFVLKN 270
+ V+KN
Sbjct: 60 KATNVVKN 67
>gi|226310536|ref|YP_002770430.1| cold shock protein [Brevibacillus brevis NBRC 100599]
gi|398816934|ref|ZP_10575571.1| cold shock protein [Brevibacillus sp. BC25]
gi|226093484|dbj|BAH41926.1| cold shock protein [Brevibacillus brevis NBRC 100599]
gi|398031626|gb|EJL25007.1| cold shock protein [Brevibacillus sp. BC25]
Length = 66
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFIA N DVFVH I+ + +KTL EG+ VEF++++G++G
Sbjct: 4 GTVKWFNAEKGYGFIAVEGGN-DVFVHFSAIQGDG----FKTLEEGQRVEFNVVEGNRGP 58
Query: 96 EAINVT 101
+A NVT
Sbjct: 59 QAENVT 64
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFIA N DVFVH I+ + +KTL EG+ VEF++++G++G
Sbjct: 4 GTVKWFNAEKGYGFIAVEGGN-DVFVHFSAIQGDG----FKTLEEGQRVEFNVVEGNRGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|209693681|ref|YP_002261609.1| cold shock protein [Aliivibrio salmonicida LFI1238]
gi|208007632|emb|CAQ77736.1| cold shock protein [Aliivibrio salmonicida LFI1238]
Length = 69
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I + +KTL EG+ V F++ QG
Sbjct: 2 SKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLKEGQKVSFEVEQG 57
Query: 92 DKGHEAINVTG 102
KG +A NV G
Sbjct: 58 QKGPQASNVVG 68
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I + +KTL EG+ V F++ QG
Sbjct: 2 SKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAI----ASEGFKTLKEGQKVSFEVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|167758030|ref|ZP_02430157.1| hypothetical protein CLOSCI_00368 [Clostridium scindens ATCC 35704]
gi|167663927|gb|EDS08057.1| cold-shock DNA-binding domain protein [Clostridium scindens ATCC
35704]
Length = 80
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI+ + N DVFVH + + +K+L EG+ VE+D+ +G KG
Sbjct: 18 GTVKWFNNQKGYGFISDEAGN-DVFVHYSGLNMDG----FKSLEEGQEVEYDVTEGAKGP 72
Query: 96 EAINVT 101
+A+NVT
Sbjct: 73 QAVNVT 78
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI+ + N DVFVH + + +K+L EG+ VE+D+ +G KG
Sbjct: 18 GTVKWFNNQKGYGFISDEAGN-DVFVHYSGLNMDG----FKSLEEGQEVEYDVTEGAKGP 72
Query: 263 Q 263
Q
Sbjct: 73 Q 73
>gi|157963078|ref|YP_001503112.1| cold-shock DNA-binding domain-containing protein [Shewanella
pealeana ATCC 700345]
gi|167625248|ref|YP_001675542.1| cold-shock DNA-binding domain-containing protein [Shewanella
halifaxensis HAW-EB4]
gi|157848078|gb|ABV88577.1| cold-shock DNA-binding domain protein [Shewanella pealeana ATCC
700345]
gi|167355270|gb|ABZ77883.1| cold-shock DNA-binding domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 69
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+ G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++ QG
Sbjct: 2 SNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITSDG----FKTLAEGQKVSFEVEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGLQAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+ G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++ QG
Sbjct: 2 SNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAITSDG----FKTLAEGQKVSFEVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGLQ 62
>gi|15226451|ref|NP_179702.1| glycine-rich protein 2B [Arabidopsis thaliana]
gi|17366505|sp|Q38896.1|CSP4_ARATH RecName: Full=Cold shock domain-containing protein 4; Short=AtCSP4;
AltName: Full=Glycine-rich protein 2b; Short=AtGRP2b
gi|1063684|gb|AAA91165.1| AtGRP2b [Arabidopsis thaliana]
gi|4803937|gb|AAD29810.1| glycine-rich protein (AtGRP2) [Arabidopsis thaliana]
gi|16323178|gb|AAL15323.1| At2g21060/F26H11.18 [Arabidopsis thaliana]
gi|60543359|gb|AAX22277.1| At2g21060 [Arabidopsis thaliana]
gi|330252023|gb|AEC07117.1| glycine-rich protein 2B [Arabidopsis thaliana]
Length = 201
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF + G+GFI +D+FVH I+ +++LA E+VEFD+ + G
Sbjct: 17 GTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEG----FRSLAAEESVEFDVEVDNSGR 72
Query: 96 -EAINVTGPDGRHVQG 110
+AI V+GPDG VQG
Sbjct: 73 PKAIEVSGPDGAPVQG 88
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
G VKWF + G+GFI +D+FVH I+ +++LA E+VEFD+
Sbjct: 17 GTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEG----FRSLAAEESVEFDV 65
>gi|399019585|ref|ZP_10721731.1| cold shock protein [Herbaspirillum sp. CF444]
gi|398097476|gb|EJL87780.1| cold shock protein [Herbaspirillum sp. CF444]
Length = 69
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V+F++ QG K
Sbjct: 2 ATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNG----FKTLKEGQKVQFEVTQGPK 57
Query: 94 GHEAINVTGP 103
G +A N+ P
Sbjct: 58 GKQASNIQAP 67
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V+F++ QG K
Sbjct: 2 ATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNG----FKTLKEGQKVQFEVTQGPK 57
Query: 261 GNQ 263
G Q
Sbjct: 58 GKQ 60
>gi|256380782|ref|YP_003104442.1| cold-shock DNA-binding domain-containing protein [Actinosynnema
mirum DSM 43827]
gi|255925085|gb|ACU40596.1| cold-shock DNA-binding domain protein [Actinosynnema mirum DSM
43827]
Length = 67
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFIA + DVFVH I+ N ++TL E + VEF+I QG KG
Sbjct: 4 GTVKWFNAEKGYGFIAQSNGGPDVFVHYSEIQGNG----FRTLEENQRVEFEIGQGTKGP 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAQNV 64
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFIA + DVFVH I+ N ++TL E + VEF+I QG KG
Sbjct: 4 GTVKWFNAEKGYGFIAQSNGGPDVFVHYSEIQGNG----FRTLEENQRVEFEIGQGTKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|157158051|ref|YP_001462848.1| cold shock DNA-binding protein [Escherichia coli E24377A]
gi|222156313|ref|YP_002556452.1| Cold shock-like protein cspB [Escherichia coli LF82]
gi|331668012|ref|ZP_08368867.1| conserved domain protein [Escherichia coli TA271]
gi|331673146|ref|ZP_08373914.1| conserved domain protein [Escherichia coli TA280]
gi|417138032|ref|ZP_11981765.1| 7.4 kDa cold shock protein [Escherichia coli 97.0259]
gi|417230702|ref|ZP_12032124.1| 7.4 kDa cold shock protein [Escherichia coli 5.0959]
gi|419369935|ref|ZP_13911057.1| cold shock protein CspA [Escherichia coli DEC14A]
gi|419913764|ref|ZP_14432176.1| cold shock protein [Escherichia coli KD1]
gi|425287254|ref|ZP_18678181.1| putative cold shock protein [Escherichia coli 3006]
gi|432592729|ref|ZP_19829050.1| cold shock-like protein CspB [Escherichia coli KTE60]
gi|432718672|ref|ZP_19953642.1| cold shock-like protein CspB [Escherichia coli KTE9]
gi|432815252|ref|ZP_20049038.1| cold shock-like protein CspB [Escherichia coli KTE115]
gi|450197526|ref|ZP_21893065.1| Cold shock-like protein cspB [Escherichia coli SEPT362]
gi|157080081|gb|ABV19789.1| cold shock DNA-binding protein [Escherichia coli E24377A]
gi|222033318|emb|CAP76058.1| Cold shock-like protein cspB [Escherichia coli LF82]
gi|331064754|gb|EGI36658.1| conserved domain protein [Escherichia coli TA271]
gi|331069344|gb|EGI40731.1| conserved domain protein [Escherichia coli TA280]
gi|378219395|gb|EHX79663.1| cold shock protein CspA [Escherichia coli DEC14A]
gi|386158017|gb|EIH14354.1| 7.4 kDa cold shock protein [Escherichia coli 97.0259]
gi|386205713|gb|EII10222.1| 7.4 kDa cold shock protein [Escherichia coli 5.0959]
gi|388388279|gb|EIL49865.1| cold shock protein [Escherichia coli KD1]
gi|408218445|gb|EKI42662.1| putative cold shock protein [Escherichia coli 3006]
gi|431129574|gb|ELE31688.1| cold shock-like protein CspB [Escherichia coli KTE60]
gi|431263824|gb|ELF55808.1| cold shock-like protein CspB [Escherichia coli KTE9]
gi|431364809|gb|ELG51337.1| cold shock-like protein CspB [Escherichia coli KTE115]
gi|449314839|gb|EMD04998.1| Cold shock-like protein cspB [Escherichia coli SEPT362]
Length = 71
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ +N Y+TL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56
Query: 90 QGDKGHEAINVTGPD 104
G KG A+NV D
Sbjct: 57 SGAKGPAAVNVIITD 71
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ +N Y+TL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 SGAKG 61
>gi|157374396|ref|YP_001472996.1| cold shock-like protein [Shewanella sediminis HAW-EB3]
gi|157316770|gb|ABV35868.1| putative Cold shock-like protein [Shewanella sediminis HAW-EB3]
Length = 70
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ G VKWF+ + G+GFI+ + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSTTGTVKWFNEEKGFGFISQENGGDDVFVHFRAIASDG----FKTLAEGQKVSFEVE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A NV
Sbjct: 57 QGQKGLQAANVVA 69
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ G VKWF+ + G+GFI+ + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSTTGTVKWFNEEKGFGFISQENGGDDVFVHFRAIASDG----FKTLAEGQKVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|456392302|gb|EMF57645.1| cold shock protein [Streptomyces bottropensis ATCC 25435]
Length = 96
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 1 MQMCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVF 60
M C +GT+A + + ++ +AT G VKWF+ + G+GFIA DVF
Sbjct: 1 MLCCAAGTRAITSVFHMEWEAFIDRKASDMAT---GTVKWFNAEKGFGFIAQDGGGPDVF 57
Query: 61 VHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVT 101
H I + Y+ L EG++V FD+ QG KG +A N+T
Sbjct: 58 AHYSAINSSG----YRELQEGQSVTFDVTQGQKGPQAENIT 94
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 171 CDSGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHS 230
C +GT+A + + ++ +AT G VKWF+ + G+GFIA DVF H
Sbjct: 4 CAAGTRAITSVFHMEWEAFIDRKASDMAT---GTVKWFNAEKGFGFIAQDGGGPDVFAHY 60
Query: 231 KRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQ 263
I + Y+ L EG++V FD+ QG KG Q
Sbjct: 61 SAINSSG----YRELQEGQSVTFDVTQGQKGPQ 89
>gi|338731611|ref|YP_004661003.1| cold-shock DNA-binding protein family [Thermotoga thermarum DSM
5069]
gi|335365962|gb|AEH51907.1| cold-shock DNA-binding protein family [Thermotoga thermarum DSM
5069]
Length = 67
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF + GYGFI T + EDVFVH IK + +KTL EG+ V+F++ Q KG
Sbjct: 4 GTVKWFDPRKGYGFI-TKENGEDVFVHFSAIKVDG----FKTLKEGQKVQFEVQQTSKGP 58
Query: 96 EAINVT 101
+A+NVT
Sbjct: 59 QAVNVT 64
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF + GYGFI T + EDVFVH IK + +KTL EG+ V+F++ Q KG
Sbjct: 4 GTVKWFDPRKGYGFI-TKENGEDVFVHFSAIKVDG----FKTLKEGQKVQFEVQQTSKGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|296225904|ref|XP_002758696.1| PREDICTED: protein lin-28 homolog A-like [Callithrix jacchus]
Length = 207
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 19/127 (14%)
Query: 18 SANESPKKEPVVLATKV--------CGVVKWFSVKSGYGFIATPSSNE-------DVFVH 62
+A E+PK+ P +A + G+ KWF+V+ G+GF++ +S DVF+H
Sbjct: 16 AAEEAPKEAPEDVARAMDKPQLLHGAGICKWFNVRMGFGFLSMTASTGVALDPAVDVFMH 75
Query: 63 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
++ +++L + E VEF + KG E+I VTGP G GS+ K +
Sbjct: 76 QSKLHMEG----FRSLKKDEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERLPKGKKMPK 131
Query: 123 RKAKANK 129
R++K ++
Sbjct: 132 RRSKGDR 138
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 19/92 (20%)
Query: 185 SASESPKKEPVVLATKV--------CGVVKWFSVKSGYGFIATPSSNE-------DVFVH 229
+A E+PK+ P +A + G+ KWF+V+ G+GF++ +S DVF+H
Sbjct: 16 AAEEAPKEAPEDVARAMDKPQLLHGAGICKWFNVRMGFGFLSMTASTGVALDPAVDVFMH 75
Query: 230 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
++ +++L + E VEF + KG
Sbjct: 76 QSKLHMEG----FRSLKKDEAVEFTFKKSAKG 103
>gi|343494953|ref|ZP_08733170.1| putative cold shock-like protein [Vibrio nigripulchritudo ATCC
27043]
gi|342824368|gb|EGU58919.1| putative cold shock-like protein [Vibrio nigripulchritudo ATCC
27043]
Length = 69
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G VKWF+ + G+GFI DVFVH + I + +KTLAEG+ V F++ QG
Sbjct: 2 SKTTGTVKWFNEEKGFGFITQEDGGADVFVHFRAITGDG----FKTLAEGQKVSFEVEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGPQAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G VKWF+ + G+GFI DVFVH + I + +KTLAEG+ V F++ QG
Sbjct: 2 SKTTGTVKWFNEEKGFGFITQEDGGADVFVHFRAITGDG----FKTLAEGQKVSFEVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|398796809|ref|ZP_10556248.1| cold shock protein [Pantoea sp. YR343]
gi|398797605|ref|ZP_10556925.1| cold shock protein [Pantoea sp. GM01]
gi|398102331|gb|EJL92512.1| cold shock protein [Pantoea sp. GM01]
gi|398202435|gb|EJM89279.1| cold shock protein [Pantoea sp. YR343]
Length = 70
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N YKTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPNDGSKDVFVHFSAIQSDN----YKTLDEGQQVSFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAGNVT 68
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N YKTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPNDGSKDVFVHFSAIQSDN----YKTLDEGQQVSFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|375259628|ref|YP_005018798.1| cold shock protein CspE [Klebsiella oxytoca KCTC 1686]
gi|395233366|ref|ZP_10411606.1| cold shock protein CspE [Enterobacter sp. Ag1]
gi|397656696|ref|YP_006497398.1| Cold shock protein CspE [Klebsiella oxytoca E718]
gi|402839742|ref|ZP_10888226.1| cold shock protein CspE [Klebsiella sp. OBRC7]
gi|421726090|ref|ZP_16165267.1| cold shock protein CspE [Klebsiella oxytoca M5al]
gi|423101884|ref|ZP_17089586.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5242]
gi|423107300|ref|ZP_17094995.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5243]
gi|423113178|ref|ZP_17100869.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5245]
gi|423128055|ref|ZP_17115734.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5250]
gi|365909106|gb|AEX04559.1| cold shock protein CspE [Klebsiella oxytoca KCTC 1686]
gi|376389426|gb|EHT02118.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5243]
gi|376389720|gb|EHT02410.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5245]
gi|376390710|gb|EHT03393.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5242]
gi|376395094|gb|EHT07744.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5250]
gi|394345251|gb|AFN31372.1| Cold shock protein CspE [Klebsiella oxytoca E718]
gi|394732093|gb|EJF31800.1| cold shock protein CspE [Enterobacter sp. Ag1]
gi|402287668|gb|EJU36107.1| cold shock protein CspE [Klebsiella sp. OBRC7]
gi|410373057|gb|EKP27761.1| cold shock protein CspE [Klebsiella oxytoca M5al]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|308188556|ref|YP_003932687.1| cold shock-like protein cspA [Pantoea vagans C9-1]
gi|308059066|gb|ADO11238.1| Cold shock-like protein cspA [Pantoea vagans C9-1]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N YKTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPDDGSKDVFVHFSAIQADN----YKTLDEGQKVSFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAGNVT 68
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N YKTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPDDGSKDVFVHFSAIQADN----YKTLDEGQKVSFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|453363384|dbj|GAC80814.1| putative cold shock protein [Gordonia malaquae NBRC 108250]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFIA N+DVFVH I+ N +KTL E + VEF++ QG KG
Sbjct: 4 GTVKWFNAEKGFGFIAPDEGNDDVFVHYSEIQGNG----FKTLEENQRVEFEVGQGTKGP 59
Query: 96 EAINV 100
+A V
Sbjct: 60 QATGV 64
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFIA N+DVFVH I+ N +KTL E + VEF++ QG KG
Sbjct: 4 GTVKWFNAEKGFGFIAPDEGNDDVFVHYSEIQGNG----FKTLEENQRVEFEVGQGTKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|419924988|ref|ZP_14442848.1| 'cold-shock' DNA-binding domain protein [Escherichia coli 541-15]
gi|388388176|gb|EIL49768.1| 'cold-shock' DNA-binding domain protein [Escherichia coli 541-15]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I +GDKG
Sbjct: 2 GLVKWFNEDKGFGFISPLDGSKDIFVHLSALDGDN----FKTLFEGQKVEFAIHRGDKGP 57
Query: 96 EAINVT 101
A NVT
Sbjct: 58 AAANVT 63
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I +GDKG
Sbjct: 2 GLVKWFNEDKGFGFISPLDGSKDIFVHLSALDGDN----FKTLFEGQKVEFAIHRGDKG 56
>gi|374702401|ref|ZP_09709271.1| cold-shock DNA-binding protein family protein [Pseudomonas sp. S9]
Length = 87
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI +ED+F H I+ + YKTL G+ V FDI+QG KG
Sbjct: 4 GKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMDG----YKTLKAGQPVSFDIIQGPKGL 59
Query: 96 EAINVT 101
A+N++
Sbjct: 60 HAVNIS 65
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ GYGFI +ED+F H I+ + YKTL G+ V FDI+QG KG
Sbjct: 4 GKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMDG----YKTLKAGQPVSFDIIQGPKG 58
>gi|344287438|ref|XP_003415460.1| PREDICTED: protein lin-28 homolog A-like [Loxodonta africana]
Length = 205
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKT 77
+EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++
Sbjct: 29 EEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRS 82
Query: 78 LAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
L EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 83 LKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 134
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKT 244
+EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++
Sbjct: 29 EEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRS 82
Query: 245 LAEGETVEFDIMQGDKG 261
L EGE VEF + KG
Sbjct: 83 LKEGEAVEFTFKKSAKG 99
>gi|333900514|ref|YP_004474387.1| cold-shock DNA-binding domain-containing protein [Pseudomonas fulva
12-X]
gi|333115779|gb|AEF22293.1| cold-shock DNA-binding domain protein [Pseudomonas fulva 12-X]
Length = 88
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI +ED+F H I+ + YKTL G+ V FDI+QG KG
Sbjct: 4 GKVKWFNNAKGYGFILADGRDEDLFAHYSAIQMDG----YKTLKAGQAVSFDIIQGPKGL 59
Query: 96 EAINVTG 102
A+N++
Sbjct: 60 HAVNISA 66
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ GYGFI +ED+F H I+ + YKTL G+ V FDI+QG KG
Sbjct: 4 GKVKWFNNAKGYGFILADGRDEDLFAHYSAIQMDG----YKTLKAGQAVSFDIIQGPKG 58
>gi|82242626|sp|Q8AVK2.1|LN28B_XENLA RecName: Full=Protein lin-28 homolog B; Short=Lin-28B
gi|27503403|gb|AAH42225.1| LOC373796 protein, partial [Xenopus laevis]
Length = 252
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 28 VVLATKVCGVVKWFSVKSGYGFIA------TPSSNE-DVFVHSKRIKYNNPRKLYKTLAE 80
V+L + C KWF+V+ G+GFI+ +P N DVFVH ++ + +++L E
Sbjct: 30 VLLGSGHC---KWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMDG----FRSLKE 82
Query: 81 GETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
GE VEF + KG E++ VTGP G GS+ +RK K ++
Sbjct: 83 GEPVEFTFKKSSKGFESLRVTGPGGNPCLGSERRPKAKTVQKRKPKGDR 131
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 14/74 (18%)
Query: 195 VVLATKVCGVVKWFSVKSGYGFIA------TPSSNE-DVFVHSKRIKYNNPRKLYKTLAE 247
V+L + C KWF+V+ G+GFI+ +P N DVFVH ++ + +++L E
Sbjct: 30 VLLGSGHC---KWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMDG----FRSLKE 82
Query: 248 GETVEFDIMQGDKG 261
GE VEF + KG
Sbjct: 83 GEPVEFTFKKSSKG 96
>gi|441505285|ref|ZP_20987273.1| Cold shock protein CspA [Photobacterium sp. AK15]
gi|441427140|gb|ELR64614.1| Cold shock protein CspA [Photobacterium sp. AK15]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G VKWF+ + G+GFI + DVFVH + I + +KTL+EG+ V+FD QG
Sbjct: 2 SKATGTVKWFNEEKGFGFITQDNGGADVFVHFRAIAGDG----FKTLSEGQKVQFDTEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 PKGLQAANV 66
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G VKWF+ + G+GFI + DVFVH + I + +KTL+EG+ V+FD QG
Sbjct: 2 SKATGTVKWFNEEKGFGFITQDNGGADVFVHFRAIAGDG----FKTLSEGQKVQFDTEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 PKGLQ 62
>gi|407473365|ref|YP_006787765.1| cold shock protein CspA [Clostridium acidurici 9a]
gi|407049873|gb|AFS77918.1| cold shock protein CspA [Clostridium acidurici 9a]
Length = 66
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G VKWF+ GYGFI++ + EDVFVH I + +KTL EG+ VEF+I++G+K
Sbjct: 2 IKGTVKWFNATKGYGFISSENG-EDVFVHYSAISGDG----FKTLEEGQNVEFEIVEGEK 56
Query: 94 GHEAINVT 101
G +A NV+
Sbjct: 57 GPQATNVS 64
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G VKWF+ GYGFI++ + EDVFVH I + +KTL EG+ VEF+I++G+K
Sbjct: 2 IKGTVKWFNATKGYGFISSENG-EDVFVHYSAISGDG----FKTLEEGQNVEFEIVEGEK 56
Query: 261 GNQ 263
G Q
Sbjct: 57 GPQ 59
>gi|261341246|ref|ZP_05969104.1| putative cold shock protein [Enterobacter cancerogenus ATCC 35316]
gi|288316550|gb|EFC55488.1| putative cold shock protein [Enterobacter cancerogenus ATCC 35316]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|397167471|ref|ZP_10490913.1| RNA chaperone, negative regulator of cspA transcription
[Enterobacter radicincitans DSM 16656]
gi|396090829|gb|EJI88397.1| RNA chaperone, negative regulator of cspA transcription
[Enterobacter radicincitans DSM 16656]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|322417715|ref|YP_004196938.1| cold-shock DNA-binding domain-containing protein [Geobacter sp.
M18]
gi|320124102|gb|ADW11662.1| cold-shock DNA-binding domain protein [Geobacter sp. M18]
Length = 66
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVVKWF+ G+GFI + EDVFVH I+ + +K+LAEG++V FD+ QG KG
Sbjct: 4 GVVKWFNDSKGFGFI-EQENGEDVFVHFSAIQSDG----FKSLAEGDSVTFDVQQGPKGL 58
Query: 96 EAINVT 101
+A NVT
Sbjct: 59 QAANVT 64
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
GVVKWF+ G+GFI + EDVFVH I+ + +K+LAEG++V FD+ QG KG
Sbjct: 4 GVVKWFNDSKGFGFI-EQENGEDVFVHFSAIQSDG----FKSLAEGDSVTFDVQQGPKGL 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|238927666|ref|ZP_04659426.1| major cold shock protein [Selenomonas flueggei ATCC 43531]
gi|238884382|gb|EEQ48020.1| major cold shock protein [Selenomonas flueggei ATCC 43531]
Length = 88
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWFS GYGFI+ +DVFVH I+ YKTL+EG+ VEFDI++G +G
Sbjct: 25 GKVKWFSADKGYGFISR-EDGDDVFVHFSSIQGEG----YKTLSEGQEVEFDIVEGARGP 79
Query: 96 EAINV 100
+A NV
Sbjct: 80 QADNV 84
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWFS GYGFI+ +DVFVH I+ YKTL+EG+ VEFDI++G +G
Sbjct: 25 GKVKWFSADKGYGFISR-EDGDDVFVHFSSIQGEG----YKTLSEGQEVEFDIVEGARGP 79
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 80 QADNVVK 86
>gi|126173707|ref|YP_001049856.1| cold-shock DNA-binding domain-containing protein [Shewanella
baltica OS155]
gi|386340465|ref|YP_006036831.1| cold-shock protein [Shewanella baltica OS117]
gi|125996912|gb|ABN60987.1| cold-shock DNA-binding protein family [Shewanella baltica OS155]
gi|334862866|gb|AEH13337.1| cold-shock DNA-binding domain protein [Shewanella baltica OS117]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K GVVKWF+ G+GFI+ + D FVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKTTGVVKWFNEDKGFGFISPDNGGADAFVHFRAIVSEG----FKTLAEGQKVSFDIEQG 57
Query: 92 DKGHEAINVT 101
KG +A NV
Sbjct: 58 QKGPQAGNVV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K GVVKWF+ G+GFI+ + D FVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKTTGVVKWFNEDKGFGFISPDNGGADAFVHFRAIVSEG----FKTLAEGQKVSFDIEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|15600936|ref|NP_232566.1| cold shock transcriptional regulator CspA [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121587988|ref|ZP_01677741.1| cold shock transcriptional regulator CspA [Vibrio cholerae 2740-80]
gi|121728193|ref|ZP_01681227.1| cold shock transcriptional regulator CspA [Vibrio cholerae V52]
gi|147671768|ref|YP_001215947.1| cold shock transcriptional regulator CspA [Vibrio cholerae O395]
gi|153214405|ref|ZP_01949376.1| cold shock transcriptional regulator CspA [Vibrio cholerae 1587]
gi|153802385|ref|ZP_01956971.1| cold shock transcriptional regulator CspA [Vibrio cholerae MZO-3]
gi|153816822|ref|ZP_01969489.1| cold shock transcriptional regulator CspA [Vibrio cholerae NCTC
8457]
gi|153825020|ref|ZP_01977687.1| cold-shock' DNA-binding domain, putative [Vibrio cholerae MZO-2]
gi|153830344|ref|ZP_01983011.1| cold shock transcriptional regulator CspA [Vibrio cholerae 623-39]
gi|227119343|ref|YP_002821238.1| cold shock transcriptional regulator CspA [Vibrio cholerae O395]
gi|227811792|ref|YP_002811802.1| cold shock transcriptional regulator CspA [Vibrio cholerae M66-2]
gi|229506667|ref|ZP_04396176.1| cold shock protein CspG [Vibrio cholerae BX 330286]
gi|229510535|ref|ZP_04400015.1| cold shock protein CspG [Vibrio cholerae B33]
gi|229514666|ref|ZP_04404127.1| cold shock protein CspG [Vibrio cholerae TMA 21]
gi|229517333|ref|ZP_04406778.1| cold shock protein CspG [Vibrio cholerae RC9]
gi|229522836|ref|ZP_04412250.1| cold shock protein CspG [Vibrio cholerae TM 11079-80]
gi|229527853|ref|ZP_04417244.1| cold shock protein CspG [Vibrio cholerae 12129(1)]
gi|229605144|ref|YP_002875848.1| cold shock protein CspG [Vibrio cholerae MJ-1236]
gi|254286659|ref|ZP_04961614.1| cold shock transcriptional regulator CspA [Vibrio cholerae
AM-19226]
gi|254850434|ref|ZP_05239784.1| cold shock transcriptional regulator CspA [Vibrio cholerae MO10]
gi|255746020|ref|ZP_05419967.1| cold shock protein CspG [Vibrio cholera CIRS 101]
gi|261212663|ref|ZP_05926947.1| cold shock protein CspG [Vibrio sp. RC341]
gi|262162141|ref|ZP_06031156.1| cold shock protein CspG [Vibrio cholerae INDRE 91/1]
gi|262164784|ref|ZP_06032522.1| cold shock protein CspG [Vibrio mimicus VM223]
gi|262167803|ref|ZP_06035504.1| cold shock protein CspG [Vibrio cholerae RC27]
gi|262173002|ref|ZP_06040679.1| cold shock protein CspG [Vibrio mimicus MB-451]
gi|262189592|ref|ZP_06047992.1| cold shock protein CspG [Vibrio cholerae CT 5369-93]
gi|262403347|ref|ZP_06079907.1| cold shock protein CspG [Vibrio sp. RC586]
gi|297579705|ref|ZP_06941632.1| cold shock transcriptional regulator CspA [Vibrio cholerae RC385]
gi|298500023|ref|ZP_07009829.1| cold shock transcriptional regulator CspA [Vibrio cholerae MAK 757]
gi|360038170|ref|YP_004939932.1| cold shock transcriptional regulator CspA [Vibrio cholerae O1 str.
2010EL-1786]
gi|379743608|ref|YP_005334660.1| cold shock transcriptional regulator CspA [Vibrio cholerae IEC224]
gi|384422681|ref|YP_005632040.1| Cold shock protein CspG [Vibrio cholerae LMA3984-4]
gi|417812210|ref|ZP_12458871.1| cold shock protein CspG [Vibrio cholerae HC-49A2]
gi|417816493|ref|ZP_12463123.1| cold shock protein CspG [Vibrio cholerae HCUF01]
gi|417823097|ref|ZP_12469695.1| cold shock protein CspG [Vibrio cholerae HE48]
gi|418337393|ref|ZP_12946288.1| cold shock protein CspG [Vibrio cholerae HC-23A1]
gi|418339594|ref|ZP_12948482.1| cold shock protein CspG [Vibrio cholerae HC-28A1]
gi|418349062|ref|ZP_12953794.1| cold shock protein CspG [Vibrio cholerae HC-43A1]
gi|419836973|ref|ZP_14360413.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-46B1]
gi|421316792|ref|ZP_15767362.1| cold shock protein CspG [Vibrio cholerae CP1032(5)]
gi|421323776|ref|ZP_15774303.1| cold shock protein CspG [Vibrio cholerae CP1041(14)]
gi|421326747|ref|ZP_15777265.1| cold shock protein CspG [Vibrio cholerae CP1042(15)]
gi|421331834|ref|ZP_15782313.1| cold shock protein CspG [Vibrio cholerae CP1046(19)]
gi|421349851|ref|ZP_15800220.1| cold shock protein CspA [Vibrio cholerae HE-25]
gi|421355292|ref|ZP_15805623.1| cold shock protein CspA [Vibrio cholerae HE-45]
gi|422307683|ref|ZP_16394839.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae CP1035(8)]
gi|422885336|ref|ZP_16931775.1| cold shock protein CspG [Vibrio cholerae HC-40A1]
gi|422898048|ref|ZP_16935466.1| cold shock protein CspG [Vibrio cholerae HC-48A1]
gi|422904204|ref|ZP_16939156.1| cold shock protein CspG [Vibrio cholerae HC-70A1]
gi|422907961|ref|ZP_16942740.1| cold shock protein CspG [Vibrio cholerae HE-09]
gi|422915480|ref|ZP_16949929.1| cold shock protein CspG [Vibrio cholerae HFU-02]
gi|422918763|ref|ZP_16953064.1| cold shock protein CspG [Vibrio cholerae HC-02A1]
gi|422920454|ref|ZP_16953773.1| cold shock protein CspG [Vibrio cholerae BJG-01]
gi|422927102|ref|ZP_16960107.1| cold shock protein CspG [Vibrio cholerae HC-38A1]
gi|423146442|ref|ZP_17134010.1| cold shock protein CspG [Vibrio cholerae HC-19A1]
gi|423148202|ref|ZP_17135580.1| cold shock protein CspG [Vibrio cholerae HC-21A1]
gi|423151989|ref|ZP_17139220.1| cold shock protein CspG [Vibrio cholerae HC-22A1]
gi|423158610|ref|ZP_17145623.1| cold shock protein CspG [Vibrio cholerae HC-32A1]
gi|423732434|ref|ZP_17705731.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-17A1]
gi|423734418|ref|ZP_17707631.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-41B1]
gi|423840573|ref|ZP_17717847.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-59A1]
gi|423900694|ref|ZP_17728052.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-62A1]
gi|423912234|ref|ZP_17728750.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-77A1]
gi|423938978|ref|ZP_17732461.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HE-40]
gi|423969452|ref|ZP_17736010.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HE-46]
gi|423999325|ref|ZP_17742518.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-02C1]
gi|424000062|ref|ZP_17743219.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-17A2]
gi|424004693|ref|ZP_17747698.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-37A1]
gi|424008700|ref|ZP_17751648.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-44C1]
gi|424011344|ref|ZP_17754212.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-55B2]
gi|424021167|ref|ZP_17760937.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-59B1]
gi|424587794|ref|ZP_18027366.1| cold shock protein CspG [Vibrio cholerae CP1030(3)]
gi|424591092|ref|ZP_18030525.1| cold shock protein CspG [Vibrio cholerae CP1037(10)]
gi|424592607|ref|ZP_18032022.1| cold shock protein CspG [Vibrio cholerae CP1040(13)]
gi|424596466|ref|ZP_18035773.1| cold shock protein CspG [Vibrio Cholerae CP1044(17)]
gi|424604111|ref|ZP_18043154.1| cold shock protein CspG [Vibrio cholerae CP1050(23)]
gi|424608061|ref|ZP_18046995.1| cold shock protein CspG [Vibrio cholerae HC-39A1]
gi|424617182|ref|ZP_18055867.1| cold shock protein CspG [Vibrio cholerae HC-42A1]
gi|424626384|ref|ZP_18064834.1| cold shock protein CspG [Vibrio cholerae HC-50A1]
gi|424627277|ref|ZP_18065641.1| cold shock protein CspA [Vibrio cholerae HC-51A1]
gi|424631074|ref|ZP_18069297.1| cold shock protein CspA [Vibrio cholerae HC-52A1]
gi|424641892|ref|ZP_18079764.1| cold shock protein CspA [Vibrio cholerae HC-56A1]
gi|424643150|ref|ZP_18080928.1| cold shock protein CspA [Vibrio cholerae HC-56A2]
gi|424646407|ref|ZP_18084135.1| cold shock protein CspA [Vibrio cholerae HC-57A1]
gi|424650213|ref|ZP_18087816.1| cold shock protein CspA [Vibrio cholerae HC-57A2]
gi|424659970|ref|ZP_18097218.1| cold shock protein [Vibrio cholerae HE-16]
gi|424808908|ref|ZP_18234297.1| cold shock transcriptional regulator CspA [Vibrio mimicus SX-4]
gi|429886452|ref|ZP_19368011.1| Cold shock protein CspG [Vibrio cholerae PS15]
gi|440711100|ref|ZP_20891741.1| cold shock protein CspG [Vibrio cholerae 4260B]
gi|443505237|ref|ZP_21072178.1| cold shock protein CspG [Vibrio cholerae HC-64A1]
gi|443509137|ref|ZP_21075887.1| cold shock protein CspG [Vibrio cholerae HC-65A1]
gi|443512980|ref|ZP_21079603.1| cold shock protein CspG [Vibrio cholerae HC-67A1]
gi|443516525|ref|ZP_21083025.1| cold shock protein CspG [Vibrio cholerae HC-68A1]
gi|443521230|ref|ZP_21087560.1| cold shock protein CspG [Vibrio cholerae HC-71A1]
gi|443521387|ref|ZP_21087709.1| cold shock protein CspG [Vibrio cholerae HC-72A2]
gi|443525203|ref|ZP_21091399.1| cold shock protein CspG [Vibrio cholerae HC-78A1]
gi|443537525|ref|ZP_21103383.1| cold shock protein CspG [Vibrio cholerae HC-81A1]
gi|449058201|ref|ZP_21736497.1| Cold shock protein CspG [Vibrio cholerae O1 str. Inaba G4222]
gi|449144830|ref|ZP_21775642.1| Cold shock protein CspG [Vibrio mimicus CAIM 602]
gi|20138011|sp|Q9KN00.1|CSPA_VIBCH RecName: Full=Cold shock-like protein CspA
gi|9657556|gb|AAF96079.1| cold shock transcriptional regulator CspA [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547786|gb|EAX57875.1| cold shock transcriptional regulator CspA [Vibrio cholerae 2740-80]
gi|121629516|gb|EAX61940.1| cold shock transcriptional regulator CspA [Vibrio cholerae V52]
gi|124115354|gb|EAY34174.1| cold shock transcriptional regulator CspA [Vibrio cholerae 1587]
gi|124122104|gb|EAY40847.1| cold shock transcriptional regulator CspA [Vibrio cholerae MZO-3]
gi|126512625|gb|EAZ75219.1| cold shock transcriptional regulator CspA [Vibrio cholerae NCTC
8457]
gi|146314151|gb|ABQ18691.1| cold shock transcriptional regulator CspA [Vibrio cholerae O395]
gi|148874187|gb|EDL72322.1| cold shock transcriptional regulator CspA [Vibrio cholerae 623-39]
gi|149741345|gb|EDM55379.1| cold-shock' DNA-binding domain, putative [Vibrio cholerae MZO-2]
gi|150423243|gb|EDN15189.1| cold shock transcriptional regulator CspA [Vibrio cholerae
AM-19226]
gi|227010934|gb|ACP07145.1| cold shock transcriptional regulator CspA [Vibrio cholerae M66-2]
gi|227014793|gb|ACP11002.1| cold shock transcriptional regulator CspA [Vibrio cholerae O395]
gi|229334215|gb|EEN99700.1| cold shock protein CspG [Vibrio cholerae 12129(1)]
gi|229340053|gb|EEO05061.1| cold shock protein CspG [Vibrio cholerae TM 11079-80]
gi|229345369|gb|EEO10342.1| cold shock protein CspG [Vibrio cholerae RC9]
gi|229348646|gb|EEO13604.1| cold shock protein CspG [Vibrio cholerae TMA 21]
gi|229352980|gb|EEO17920.1| cold shock protein CspG [Vibrio cholerae B33]
gi|229357018|gb|EEO21936.1| cold shock protein CspG [Vibrio cholerae BX 330286]
gi|229371630|gb|ACQ62052.1| cold shock protein CspG [Vibrio cholerae MJ-1236]
gi|254846139|gb|EET24553.1| cold shock transcriptional regulator CspA [Vibrio cholerae MO10]
gi|255735774|gb|EET91172.1| cold shock protein CspG [Vibrio cholera CIRS 101]
gi|260837728|gb|EEX64405.1| cold shock protein CspG [Vibrio sp. RC341]
gi|261890360|gb|EEY36347.1| cold shock protein CspG [Vibrio mimicus MB-451]
gi|262023711|gb|EEY42411.1| cold shock protein CspG [Vibrio cholerae RC27]
gi|262027164|gb|EEY45831.1| cold shock protein CspG [Vibrio mimicus VM223]
gi|262028216|gb|EEY46874.1| cold shock protein CspG [Vibrio cholerae INDRE 91/1]
gi|262034524|gb|EEY52864.1| cold shock protein CspG [Vibrio cholerae CT 5369-93]
gi|262350846|gb|EEY99979.1| cold shock protein CspG [Vibrio sp. RC586]
gi|297535351|gb|EFH74185.1| cold shock transcriptional regulator CspA [Vibrio cholerae RC385]
gi|297542004|gb|EFH78055.1| cold shock transcriptional regulator CspA [Vibrio cholerae MAK 757]
gi|327485389|gb|AEA79795.1| Cold shock protein CspG [Vibrio cholerae LMA3984-4]
gi|340039643|gb|EGR00616.1| cold shock protein CspG [Vibrio cholerae HCUF01]
gi|340045030|gb|EGR05978.1| cold shock protein CspG [Vibrio cholerae HC-49A2]
gi|340049227|gb|EGR10143.1| cold shock protein CspG [Vibrio cholerae HE48]
gi|341630248|gb|EGS55351.1| cold shock protein CspG [Vibrio cholerae HC-70A1]
gi|341630884|gb|EGS55833.1| cold shock protein CspG [Vibrio cholerae HC-40A1]
gi|341630904|gb|EGS55851.1| cold shock protein CspG [Vibrio cholerae HC-48A1]
gi|341631690|gb|EGS56571.1| cold shock protein CspG [Vibrio cholerae HFU-02]
gi|341634413|gb|EGS59173.1| cold shock protein CspG [Vibrio cholerae HC-02A1]
gi|341642571|gb|EGS66914.1| cold shock protein CspG [Vibrio cholerae HE-09]
gi|341645113|gb|EGS69269.1| cold shock protein CspG [Vibrio cholerae HC-38A1]
gi|341650301|gb|EGS74173.1| cold shock protein CspG [Vibrio cholerae BJG-01]
gi|342323860|gb|EGU19643.1| cold shock transcriptional regulator CspA [Vibrio mimicus SX-4]
gi|356421094|gb|EHH74600.1| cold shock protein CspG [Vibrio cholerae HC-19A1]
gi|356424334|gb|EHH77749.1| cold shock protein CspG [Vibrio cholerae HC-21A1]
gi|356430777|gb|EHH83982.1| cold shock protein CspG [Vibrio cholerae HC-23A1]
gi|356435070|gb|EHH88230.1| cold shock protein CspG [Vibrio cholerae HC-32A1]
gi|356436538|gb|EHH89652.1| cold shock protein CspG [Vibrio cholerae HC-22A1]
gi|356442994|gb|EHH95827.1| cold shock protein CspG [Vibrio cholerae HC-28A1]
gi|356445924|gb|EHH98724.1| cold shock protein CspG [Vibrio cholerae HC-43A1]
gi|356649324|gb|AET29378.1| cold shock transcriptional regulator CspA [Vibrio cholerae O1 str.
2010EL-1786]
gi|378796202|gb|AFC59672.1| cold shock transcriptional regulator CspA [Vibrio cholerae IEC224]
gi|395919250|gb|EJH30073.1| cold shock protein CspG [Vibrio cholerae CP1032(5)]
gi|395921790|gb|EJH32609.1| cold shock protein CspG [Vibrio cholerae CP1041(14)]
gi|395930632|gb|EJH41378.1| cold shock protein CspG [Vibrio cholerae CP1046(19)]
gi|395933672|gb|EJH44411.1| cold shock protein CspG [Vibrio cholerae CP1042(15)]
gi|395949962|gb|EJH60581.1| cold shock protein CspA [Vibrio cholerae HE-45]
gi|395956468|gb|EJH67062.1| cold shock protein CspA [Vibrio cholerae HE-25]
gi|395964242|gb|EJH74477.1| cold shock protein CspG [Vibrio cholerae HC-42A1]
gi|395965912|gb|EJH76051.1| cold shock protein CspA [Vibrio cholerae HC-56A2]
gi|395969081|gb|EJH78982.1| cold shock protein CspA [Vibrio cholerae HC-57A2]
gi|395971257|gb|EJH80942.1| cold shock protein CspG [Vibrio cholerae CP1030(3)]
gi|408009723|gb|EKG47620.1| cold shock protein CspG [Vibrio cholerae HC-50A1]
gi|408015546|gb|EKG53127.1| cold shock protein CspG [Vibrio cholerae HC-39A1]
gi|408021084|gb|EKG58359.1| cold shock protein CspA [Vibrio cholerae HC-56A1]
gi|408028945|gb|EKG65785.1| cold shock protein CspA [Vibrio cholerae HC-52A1]
gi|408033059|gb|EKG69621.1| cold shock protein CspG [Vibrio cholerae CP1037(10)]
gi|408040868|gb|EKG77020.1| cold shock protein CspA [Vibrio cholerae HC-57A1]
gi|408042695|gb|EKG78734.1| cold shock protein CspG [Vibrio cholerae CP1040(13)]
gi|408049415|gb|EKG84628.1| cold shock protein CspG [Vibrio Cholerae CP1044(17)]
gi|408050663|gb|EKG85813.1| cold shock protein CspG [Vibrio cholerae CP1050(23)]
gi|408051160|gb|EKG86271.1| cold shock protein [Vibrio cholerae HE-16]
gi|408060969|gb|EKG95569.1| cold shock protein CspA [Vibrio cholerae HC-51A1]
gi|408619197|gb|EKK92235.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae CP1035(8)]
gi|408620933|gb|EKK93937.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-17A1]
gi|408631091|gb|EKL03656.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-41B1]
gi|408647879|gb|EKL19328.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-59A1]
gi|408653131|gb|EKL24308.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-62A1]
gi|408664305|gb|EKL35144.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-77A1]
gi|408664474|gb|EKL35309.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HE-40]
gi|408667172|gb|EKL37924.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HE-46]
gi|408849714|gb|EKL89727.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-02C1]
gi|408850573|gb|EKL90525.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-37A1]
gi|408854811|gb|EKL94559.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-17A2]
gi|408857523|gb|EKL97211.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-46B1]
gi|408865041|gb|EKM04454.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-59B1]
gi|408865486|gb|EKM04889.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-44C1]
gi|408870909|gb|EKM10174.1| 'Cold-shock' DNA-binding domain protein [Vibrio cholerae HC-55B2]
gi|429226781|gb|EKY32861.1| Cold shock protein CspG [Vibrio cholerae PS15]
gi|439972587|gb|ELP48830.1| cold shock protein CspG [Vibrio cholerae 4260B]
gi|443430535|gb|ELS73104.1| cold shock protein CspG [Vibrio cholerae HC-64A1]
gi|443434374|gb|ELS80531.1| cold shock protein CspG [Vibrio cholerae HC-65A1]
gi|443438167|gb|ELS87897.1| cold shock protein CspG [Vibrio cholerae HC-67A1]
gi|443442276|gb|ELS95589.1| cold shock protein CspG [Vibrio cholerae HC-68A1]
gi|443445259|gb|ELT01981.1| cold shock protein CspG [Vibrio cholerae HC-71A1]
gi|443452710|gb|ELT12892.1| cold shock protein CspG [Vibrio cholerae HC-72A2]
gi|443456566|gb|ELT20237.1| cold shock protein CspG [Vibrio cholerae HC-78A1]
gi|443467534|gb|ELT42190.1| cold shock protein CspG [Vibrio cholerae HC-81A1]
gi|448263587|gb|EMB00828.1| Cold shock protein CspG [Vibrio cholerae O1 str. Inaba G4222]
gi|449079615|gb|EMB50537.1| Cold shock protein CspG [Vibrio mimicus CAIM 602]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI+ + +DVFVH K I +KTLAEG+ V F +
Sbjct: 1 MSQKMTGSVKWFNETKGFGFISQDNGGQDVFVHFKSIVSEG----FKTLAEGQRVSFTVE 56
Query: 90 QGDKGHEAINVT 101
QG KG +A VT
Sbjct: 57 QGKKGPQAAQVT 68
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI+ + +DVFVH K I +KTLAEG+ V F +
Sbjct: 1 MSQKMTGSVKWFNETKGFGFISQDNGGQDVFVHFKSIVSEG----FKTLAEGQRVSFTVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGKKGPQ 63
>gi|119628220|gb|EAX07815.1| lin-28 homolog (C. elegans), isoform CRA_b [Homo sapiens]
Length = 214
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 16/115 (13%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKL---- 74
EP +L G+ KWF+V+ G+GF++ + DVFVH R+ P KL
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQVRL---IPSKLHMEG 88
Query: 75 YKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
+++L EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 89 FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKSMQKRRSKGDR 143
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 16/80 (20%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKL---- 241
EP +L G+ KWF+V+ G+GF++ + DVFVH R+ P KL
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQVRL---IPSKLHMEG 88
Query: 242 YKTLAEGETVEFDIMQGDKG 261
+++L EGE VEF + KG
Sbjct: 89 FRSLKEGEAVEFTFKKSAKG 108
>gi|16760938|ref|NP_456555.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29141370|ref|NP_804712.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213053459|ref|ZP_03346337.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213421410|ref|ZP_03354476.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
gi|213424976|ref|ZP_03357726.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213580718|ref|ZP_03362544.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213864720|ref|ZP_03386839.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|289811876|ref|ZP_06542505.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
gi|289829487|ref|ZP_06547099.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378959037|ref|YP_005216523.1| Cold shock-like protein cspJ [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|20137745|sp|P58726.1|CSPJ_SALTI RecName: Full=Cold shock-like protein CspJ
gi|25296117|pir||AD0755 cold shock protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16503235|emb|CAD05743.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29136997|gb|AAO68561.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|374352909|gb|AEZ44670.1| Cold shock-like protein cspJ [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSAE 56
Query: 90 QGDKGHEAINV 100
QG KG A+NV
Sbjct: 57 QGPKGPSAVNV 67
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ TK+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF
Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSAE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGPKG 61
>gi|422022060|ref|ZP_16368569.1| cold shock protein CspE [Providencia sneebia DSM 19967]
gi|414097810|gb|EKT59463.1| cold shock protein CspE [Providencia sneebia DSM 19967]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+KV G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF+I +G
Sbjct: 2 SKVKGNVKWFNESKGFGFITPEDGSKDVFVHFSAITSDG----FKTLAEGQKVEFEITEG 57
Query: 92 DKGHEAINV 100
KG A+NV
Sbjct: 58 AKGPSAVNV 66
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+KV G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF+I +G
Sbjct: 2 SKVKGNVKWFNESKGFGFITPEDGSKDVFVHFSAITSDG----FKTLAEGQKVEFEITEG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|357613401|gb|EHJ68487.1| hypothetical protein KGM_16662 [Danaus plexippus]
Length = 179
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G KWF+V G+GFI +DVFVH I+ +++L + E VEF+ + DKG
Sbjct: 28 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVIQMTG----FRSLGDEEVVEFECKESDKGL 83
Query: 96 EAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSR 135
EA V GP QGS R+ + KR RK R
Sbjct: 84 EATRVCGPSSVDCQGSH----------RRPLSKKRFRKIR 113
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G KWF+V G+GFI +DVFVH I+ +++L + E VEF+ + DKG
Sbjct: 28 GRCKWFNVAKGWGFITPDDGGQDVFVHQSVIQMTG----FRSLGDEEVVEFECKESDKG 82
>gi|414161454|ref|ZP_11417714.1| cold shock-like protein CspC [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876350|gb|EKS24261.1| cold shock-like protein CspC [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ + G+GFI N DVFVH I+ YK+L EG+ V+FDI++GD+G
Sbjct: 3 SGTVKWFNAEKGFGFIEREDGN-DVFVHFSAIQGEG----YKSLEEGQKVDFDIVEGDRG 57
Query: 95 HEAINVT 101
+A NV
Sbjct: 58 EQAANVV 64
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ + G+GFI N DVFVH I+ YK+L EG+ V+FDI++GD+G
Sbjct: 3 SGTVKWFNAEKGFGFIEREDGN-DVFVHFSAIQGEG----YKSLEEGQKVDFDIVEGDRG 57
Query: 262 NQFCFVLK 269
Q V+K
Sbjct: 58 EQAANVVK 65
>gi|383788937|ref|YP_005473506.1| cold shock protein [Caldisericum exile AZM16c01]
gi|381364574|dbj|BAL81403.1| cold shock protein [Caldisericum exile AZM16c01]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K G VKWF+ + G+GFI + +D+FVH I+ + YKTL EG+ VEF+I Q D
Sbjct: 3 KQTGRVKWFNSQKGFGFIVPDNGGKDLFVHFSAIQTSG----YKTLKEGQKVEFEIEQTD 58
Query: 93 KGHEAINV 100
KG +A+NV
Sbjct: 59 KGDKAVNV 66
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K G VKWF+ + G+GFI + +D+FVH I+ + YKTL EG+ VEF+I Q D
Sbjct: 3 KQTGRVKWFNSQKGFGFIVPDNGGKDLFVHFSAIQTSG----YKTLKEGQKVEFEIEQTD 58
Query: 260 KGNQ 263
KG++
Sbjct: 59 KGDK 62
>gi|374623201|ref|ZP_09695715.1| cold-shock DNA-binding domain-containing protein
[Ectothiorhodospira sp. PHS-1]
gi|373942316|gb|EHQ52861.1| cold-shock DNA-binding domain-containing protein
[Ectothiorhodospira sp. PHS-1]
Length = 68
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFIA DVFVH I + +KTLAEG+ V + + QG KG
Sbjct: 4 GTVKWFNETKGFGFIAPADGGADVFVHYSAINSDG----FKTLAEGQKVNYQVQQGPKGL 59
Query: 96 EAINVT 101
+A+NVT
Sbjct: 60 QAVNVT 65
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFIA DVFVH I + +KTLAEG+ V + + QG KG
Sbjct: 4 GTVKWFNETKGFGFIAPADGGADVFVHYSAINSDG----FKTLAEGQKVNYQVQQGPKGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|408480680|ref|ZP_11186899.1| cold-shock DNA-binding protein family [Pseudomonas sp. R81]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ + G+GFI + DVFVH IK + +KTL EG+ VEF++ QG KG
Sbjct: 3 TGTVKWFNAEKGFGFITPDDGSADVFVHYSAIKSDG----FKTLEEGQKVEFEVTQGAKG 58
Query: 95 HEAINV 100
+A NV
Sbjct: 59 AQAENV 64
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ + G+GFI + DVFVH IK + +KTL EG+ VEF++ QG KG
Sbjct: 3 TGTVKWFNAEKGFGFITPDDGSADVFVHYSAIKSDG----FKTLEEGQKVEFEVTQGAKG 58
Query: 262 NQ 263
Q
Sbjct: 59 AQ 60
>gi|386844646|ref|YP_006249704.1| cold shock protein [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374104947|gb|AEY93831.1| cold shock protein [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451797939|gb|AGF67988.1| cold shock protein [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ + G+GFIA DVF H I N Y+ L EGETV FD+ QG KG
Sbjct: 3 SGTVKWFNSEKGFGFIAQDGGGPDVFAHYSNISGNG----YRELVEGETVTFDVTQGQKG 58
Query: 95 HEAINV 100
+A N+
Sbjct: 59 PQAENI 64
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ + G+GFIA DVF H I N Y+ L EGETV FD+ QG KG
Sbjct: 3 SGTVKWFNSEKGFGFIAQDGGGPDVFAHYSNISGNG----YRELVEGETVTFDVTQGQKG 58
Query: 262 NQFCFVLKNIV 272
Q +NIV
Sbjct: 59 PQ----AENIV 65
>gi|302875711|ref|YP_003844344.1| cold-shock DNA-binding domain-containing protein [Clostridium
cellulovorans 743B]
gi|307689143|ref|ZP_07631589.1| cold-shock DNA-binding domain-containing protein [Clostridium
cellulovorans 743B]
gi|302578568|gb|ADL52580.1| cold-shock DNA-binding domain protein [Clostridium cellulovorans
743B]
Length = 68
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ + G+GFI N DVFVH I+ ++PRK L EGE VEF++ QG KG
Sbjct: 3 TGTVKWFNQEKGFGFIEVEGEN-DVFVHFSAIQSDSPRK---NLEEGEKVEFEVEQGPKG 58
Query: 95 HEAINVT 101
+A NV
Sbjct: 59 LQAANVV 65
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ + G+GFI N DVFVH I+ ++PRK L EGE VEF++ QG KG
Sbjct: 3 TGTVKWFNQEKGFGFIEVEGEN-DVFVHFSAIQSDSPRK---NLEEGEKVEFEVEQGPKG 58
Query: 262 NQFCFVLK 269
Q V+K
Sbjct: 59 LQAANVVK 66
>gi|89074299|ref|ZP_01160789.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
gi|90578632|ref|ZP_01234442.1| putative Cold shock-like protein [Photobacterium angustum S14]
gi|89050003|gb|EAR55537.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
gi|90439465|gb|EAS64646.1| putative Cold shock-like protein [Photobacterium angustum S14]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I +K+LAEG+ V FD+ QG
Sbjct: 2 SKATGIVKWFNDEKGFGFITQDNGGADVFVHFRAIAGEG----FKSLAEGQKVSFDVEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGPQAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I +K+LAEG+ V FD+ QG
Sbjct: 2 SKATGIVKWFNDEKGFGFITQDNGGADVFVHFRAIAGEG----FKSLAEGQKVSFDVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|332140725|ref|YP_004426463.1| hypothetical protein MADE_1006615 [Alteromonas macleodii str. 'Deep
ecotype']
gi|410860929|ref|YP_006976163.1| hypothetical protein amad1_06475 [Alteromonas macleodii AltDE1]
gi|327550747|gb|AEA97465.1| putative Cold shock-like protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|410818191|gb|AFV84808.1| hypothetical protein amad1_06475 [Alteromonas macleodii AltDE1]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ V G VKWF+ + G+GF+ + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSVNGTVKWFNEEKGFGFLTPEAGGKDVFVHFRSIASDG----FKTLAEGQEVSFEVE 56
Query: 90 QGDKGHEAINVT 101
QG KG +A NV
Sbjct: 57 QGQKGPQAANVV 68
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ V G VKWF+ + G+GF+ + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSVNGTVKWFNEEKGFGFLTPEAGGKDVFVHFRSIASDG----FKTLAEGQEVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|239616519|ref|YP_002939841.1| cold-shock DNA-binding domain protein [Kosmotoga olearia TBF
19.5.1]
gi|239505350|gb|ACR78837.1| cold-shock DNA-binding domain protein [Kosmotoga olearia TBF
19.5.1]
Length = 66
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T EDVF+H I + +KTL EG+ VEFDI G KG
Sbjct: 3 GTVKWFNAQKGYGFI-TRDEGEDVFIHFSGIVSDG----FKTLEEGQRVEFDIENGQKGA 57
Query: 96 EAINV 100
+A+NV
Sbjct: 58 QAVNV 62
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T EDVF+H I + +KTL EG+ VEFDI G KG
Sbjct: 3 GTVKWFNAQKGYGFI-TRDEGEDVFIHFSGIVSDG----FKTLEEGQRVEFDIENGQKGA 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|384254153|gb|EIE27627.1| CSD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 237
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 19 ANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 78
A E+ +++P TK G VKWF+ G+GFI D+FVH I +++L
Sbjct: 2 AAENAEEQP----TKSTGTVKWFNSSKGFGFITPEDGGTDLFVHQSSIDAEG----FRSL 53
Query: 79 AEGETVEFDIMQGDKGH-EAINVTGPDGRHVQGS 111
E E VEF + + + G +A+NVTGPDG QG+
Sbjct: 54 RENEPVEFFVEESEDGRTKAVNVTGPDGAPPQGA 87
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 186 ASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTL 245
A+E+ +++P TK G VKWF+ G+GFI D+FVH I +++L
Sbjct: 2 AAENAEEQP----TKSTGTVKWFNSSKGFGFITPEDGGTDLFVHQSSIDAEG----FRSL 53
Query: 246 AEGETVEFDIMQGDKG 261
E E VEF + + + G
Sbjct: 54 RENEPVEFFVEESEDG 69
>gi|256826371|ref|YP_003150331.1| cold-shock DNA-binding protein family [Kytococcus sedentarius DSM
20547]
gi|256689764|gb|ACV07566.1| cold-shock DNA-binding protein family [Kytococcus sedentarius DSM
20547]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF+ + G+GFI +DVFVH I+ N Y++L E + VEF+I QG KG
Sbjct: 4 GIVKWFNAEKGFGFIQQDGGGDDVFVHFSAIQTNG----YRSLEENQRVEFEITQGPKGQ 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAENV 64
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G+VKWF+ + G+GFI +DVFVH I+ N Y++L E + VEF+I QG KG
Sbjct: 4 GIVKWFNAEKGFGFIQQDGGGDDVFVHFSAIQTNG----YRSLEENQRVEFEITQGPKGQ 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|392407948|ref|YP_006444556.1| cold shock protein [Anaerobaculum mobile DSM 13181]
gi|390621084|gb|AFM22231.1| cold shock protein [Anaerobaculum mobile DSM 13181]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K G VKWF+ GYGFI T + +DVFVH I+ + +KTLAEG+ V F+I+QG
Sbjct: 2 KTQGTVKWFNESKGYGFI-TADTGKDVFVHYSAIQQDG----FKTLAEGQRVSFEIVQGT 56
Query: 93 KGHEAINVT 101
KG +A VT
Sbjct: 57 KGPQASEVT 65
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K G VKWF+ GYGFI T + +DVFVH I+ + +KTLAEG+ V F+I+QG
Sbjct: 2 KTQGTVKWFNESKGYGFI-TADTGKDVFVHYSAIQQDG----FKTLAEGQRVSFEIVQGT 56
Query: 260 KGNQ 263
KG Q
Sbjct: 57 KGPQ 60
>gi|120599534|ref|YP_964108.1| cold-shock DNA-binding domain-containing protein [Shewanella sp.
W3-18-1]
gi|146292469|ref|YP_001182893.1| cold-shock DNA-binding domain-containing protein [Shewanella
putrefaciens CN-32]
gi|386313146|ref|YP_006009311.1| cold-shock protein [Shewanella putrefaciens 200]
gi|120559627|gb|ABM25554.1| cold-shock DNA-binding protein family [Shewanella sp. W3-18-1]
gi|145564159|gb|ABP75094.1| cold-shock DNA-binding protein family [Shewanella putrefaciens
CN-32]
gi|319425771|gb|ADV53845.1| cold-shock DNA-binding domain protein [Shewanella putrefaciens 200]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K GVVKWF+ + G+GFI+ + D FVH + I +KTL EG+ V FDI QG
Sbjct: 2 SKTTGVVKWFNEEKGFGFISPDNGGADAFVHFRAIVSEG----FKTLGEGQKVSFDIEQG 57
Query: 92 DKGHEAINVT 101
KG +A NV
Sbjct: 58 QKGPQAANVV 67
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K GVVKWF+ + G+GFI+ + D FVH + I +KTL EG+ V FDI QG
Sbjct: 2 SKTTGVVKWFNEEKGFGFISPDNGGADAFVHFRAIVSEG----FKTLGEGQKVSFDIEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|260768242|ref|ZP_05877176.1| cold shock protein [Vibrio furnissii CIP 102972]
gi|375130769|ref|YP_004992869.1| Cold shock protein [Vibrio furnissii NCTC 11218]
gi|260616272|gb|EEX41457.1| cold shock protein [Vibrio furnissii CIP 102972]
gi|315179943|gb|ADT86857.1| Cold shock protein [Vibrio furnissii NCTC 11218]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI + DVFVH I + +KTLAEG+ V FD+
Sbjct: 1 MSNKMTGSVKWFNETKGFGFITQDNGGNDVFVHFASI----VSEGFKTLAEGQRVSFDVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGKKGPQAANV 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI + DVFVH I + +KTLAEG+ V FD+
Sbjct: 1 MSNKMTGSVKWFNETKGFGFITQDNGGNDVFVHFASI----VSEGFKTLAEGQRVSFDVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGKKGPQ 63
>gi|37525256|ref|NP_928600.1| cold shock protein CspE [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36784683|emb|CAE13583.1| cold shock-like protein [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ +K+ G VKWF+ G+GFI ++DVFVH I+ +KTLAEG+ VEF+I
Sbjct: 1 MMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQITG----FKTLAEGQKVEFEIT 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 DGAKGPSAVNVV 68
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ +K+ G VKWF+ G+GFI ++DVFVH I+ +KTLAEG+ VEF+I
Sbjct: 1 MMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQITG----FKTLAEGQKVEFEIT 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 DGAKG 61
>gi|449454351|ref|XP_004144919.1| PREDICTED: glycine-rich protein 2-like [Cucumis sativus]
Length = 230
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 24 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 83
KKE + +V G VKWFS + GYGFI+ ED+FVH I+ + +++L GE
Sbjct: 22 KKEIEEMGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDG----FRSLGVGED 77
Query: 84 VEFDI-MQGDKGHEAINVTGPDGRHVQ 109
VEF I + D +A++VTGP VQ
Sbjct: 78 VEFLIEAESDGRSKAVDVTGPGEASVQ 104
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 191 KKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGET 250
KKE + +V G VKWFS + GYGFI+ ED+FVH I+ + +++L GE
Sbjct: 22 KKEIEEMGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDG----FRSLGVGED 77
Query: 251 VEFDI 255
VEF I
Sbjct: 78 VEFLI 82
>gi|354724790|ref|ZP_09039005.1| cold-shock DNA-binding protein [Enterobacter mori LMG 25706]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I +GDKG
Sbjct: 2 GLVKWFNEDKGFGFISPLDGSKDIFVHLSALNGDN----FKTLFEGQKVEFAIHRGDKGP 57
Query: 96 EAINVT 101
A NVT
Sbjct: 58 AAANVT 63
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G+VKWF+ G+GFI+ ++D+FVH + +N +KTL EG+ VEF I +GDKG
Sbjct: 2 GLVKWFNEDKGFGFISPLDGSKDIFVHLSALNGDN----FKTLFEGQKVEFAIHRGDKG 56
>gi|71908706|ref|YP_286293.1| cold-shock DNA-binding protein family protein [Dechloromonas
aromatica RCB]
gi|71848327|gb|AAZ47823.1| cold-shock DNA-binding protein family [Dechloromonas aromatica RCB]
Length = 72
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A G VKWF+ G+GFI +ED+F H I N +KTL EG+ V FD++
Sbjct: 3 VANMAIGTVKWFNDSKGFGFITPDDGSEDLFAHFSAINMNG----FKTLKEGQKVSFDVV 58
Query: 90 QGDKGHEAINV 100
QG KG +A N+
Sbjct: 59 QGPKGKQASNI 69
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A G VKWF+ G+GFI +ED+F H I N +KTL EG+ V FD++
Sbjct: 3 VANMAIGTVKWFNDSKGFGFITPDDGSEDLFAHFSAINMNG----FKTLKEGQKVSFDVV 58
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 59 QGPKGKQ 65
>gi|89072407|ref|ZP_01158986.1| cold shock protein [Photobacterium sp. SKA34]
gi|90577241|ref|ZP_01233052.1| cold shock protein [Photobacterium angustum S14]
gi|89051939|gb|EAR57391.1| cold shock protein [Photobacterium sp. SKA34]
gi|90440327|gb|EAS65507.1| cold shock protein [Photobacterium angustum S14]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++ QG
Sbjct: 2 SKSTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFEVEQG 57
Query: 92 DKGHEAINVTG 102
KG +A NV
Sbjct: 58 QKGLQAANVVA 68
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++ QG
Sbjct: 2 SKSTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFEVEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGLQ 62
>gi|348030370|ref|YP_004873056.1| cold shock-like protein cspG [Glaciecola nitratireducens FR1064]
gi|410621779|ref|ZP_11332623.1| cold shock protein cspV [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|347947713|gb|AEP31063.1| putative cold shock-like protein cspG [Glaciecola nitratireducens
FR1064]
gi|410158672|dbj|GAC27997.1| cold shock protein cspV [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+KV G VKWF+ GYGF+ + +DVFVH + I YKTL EG+ V F++ +G
Sbjct: 2 SKVTGTVKWFNADKGYGFLTQDNGGKDVFVHFRAIVAEG----YKTLPEGQKVSFEVEEG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGLQAANV 66
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+KV G VKWF+ GYGF+ + +DVFVH + I YKTL EG+ V F++ +G
Sbjct: 2 SKVTGTVKWFNADKGYGFLTQDNGGKDVFVHFRAIVAEG----YKTLPEGQKVSFEVEEG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGLQ 62
>gi|206579703|ref|YP_002239721.1| cold-shock protein [Klebsiella pneumoniae 342]
gi|288936563|ref|YP_003440622.1| cold-shock DNA-binding domain-containing protein [Klebsiella
variicola At-22]
gi|336249244|ref|YP_004592954.1| cold shock protein CspE [Enterobacter aerogenes KCTC 2190]
gi|444352606|ref|YP_007388750.1| Cold shock protein CspE [Enterobacter aerogenes EA1509E]
gi|206568761|gb|ACI10537.1| cold shock protein CspE [Klebsiella pneumoniae 342]
gi|288891272|gb|ADC59590.1| cold-shock DNA-binding domain protein [Klebsiella variicola At-22]
gi|334735300|gb|AEG97675.1| cold shock protein CspE [Enterobacter aerogenes KCTC 2190]
gi|443903436|emb|CCG31210.1| Cold shock protein CspE [Enterobacter aerogenes EA1509E]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|269104191|ref|ZP_06156887.1| putative Cold shock-like protein [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160831|gb|EEZ39328.1| putative Cold shock-like protein [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKATGTVKWFNEEKGFGFITQDNGGADVFVHFRAITGEG----FKTLAEGQKVTFDIEQG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGPQAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FDI QG
Sbjct: 2 SKATGTVKWFNEEKGFGFITQDNGGADVFVHFRAITGEG----FKTLAEGQKVTFDIEQG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|152969227|ref|YP_001334336.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|156934856|ref|YP_001438772.1| cold shock protein CspE [Cronobacter sakazakii ATCC BAA-894]
gi|262041285|ref|ZP_06014496.1| CspA family cold shock transcriptional regulator [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|296103410|ref|YP_003613556.1| cold shock protein CspE [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|330006059|ref|ZP_08305477.1| cold shock-like protein CspE [Klebsiella sp. MS 92-3]
gi|334122912|ref|ZP_08496945.1| cold shock protein CspA [Enterobacter hormaechei ATCC 49162]
gi|354722518|ref|ZP_09036733.1| cold shock protein CspE [Enterobacter mori LMG 25706]
gi|365138923|ref|ZP_09345504.1| cold shock-like protein CspE [Klebsiella sp. 4_1_44FAA]
gi|378977654|ref|YP_005225795.1| cold-shock protein [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386033801|ref|YP_005953714.1| cold shock protein CspE [Klebsiella pneumoniae KCTC 2242]
gi|389841775|ref|YP_006343859.1| cold shock protein CspE [Cronobacter sakazakii ES15]
gi|392978092|ref|YP_006476680.1| cold shock protein CspE [Enterobacter cloacae subsp. dissolvens
SDM]
gi|401676473|ref|ZP_10808457.1| cold shock-like protein CspE [Enterobacter sp. SST3]
gi|401762756|ref|YP_006577763.1| cold shock protein CspE [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|402781817|ref|YP_006637363.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|414592309|ref|ZP_11441961.1| cold shock-like protein CspE [Escherichia blattae NBRC 105725]
gi|417791471|ref|ZP_12438925.1| cold shock protein CspE [Cronobacter sakazakii E899]
gi|419974546|ref|ZP_14489964.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419977961|ref|ZP_14493259.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419984712|ref|ZP_14499857.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419993347|ref|ZP_14508290.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419996838|ref|ZP_14511638.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420002903|ref|ZP_14517552.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420006749|ref|ZP_14521245.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420012696|ref|ZP_14527009.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420020195|ref|ZP_14534384.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024220|ref|ZP_14538234.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420032821|ref|ZP_14546632.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420036156|ref|ZP_14549817.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420042049|ref|ZP_14555544.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420047144|ref|ZP_14560462.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420054064|ref|ZP_14567239.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420058960|ref|ZP_14571970.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420064310|ref|ZP_14577120.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420069681|ref|ZP_14582336.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420076310|ref|ZP_14588782.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420082438|ref|ZP_14594735.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421912895|ref|ZP_16342599.1| Cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421915687|ref|ZP_16345283.1| Cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424798578|ref|ZP_18224120.1| Cold shock protein CspE [Cronobacter sakazakii 696]
gi|424829599|ref|ZP_18254327.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|425077685|ref|ZP_18480788.1| cold shock-like protein CspE [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425080479|ref|ZP_18483576.1| cold shock-like protein CspE [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425088318|ref|ZP_18491411.1| cold shock-like protein CspE [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090540|ref|ZP_18493625.1| cold shock-like protein CspE [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428151908|ref|ZP_18999612.1| Cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428934291|ref|ZP_19007816.1| cold shock protein CspE [Klebsiella pneumoniae JHCK1]
gi|428941475|ref|ZP_19014519.1| cold shock protein CspE [Klebsiella pneumoniae VA360]
gi|429082120|ref|ZP_19145208.1| Cold shock protein CspE [Cronobacter condimenti 1330]
gi|429087404|ref|ZP_19150136.1| Cold shock protein CspE [Cronobacter universalis NCTC 9529]
gi|429090765|ref|ZP_19153472.1| Cold shock protein CspE [Cronobacter dublinensis 1210]
gi|429099587|ref|ZP_19161693.1| Cold shock protein CspE [Cronobacter dublinensis 582]
gi|429103458|ref|ZP_19165432.1| Cold shock protein CspE [Cronobacter turicensis 564]
gi|429107850|ref|ZP_19169719.1| Cold shock protein CspE [Cronobacter malonaticus 681]
gi|429109431|ref|ZP_19171201.1| Cold shock protein CspE [Cronobacter malonaticus 507]
gi|429114555|ref|ZP_19175473.1| Cold shock protein CspE [Cronobacter sakazakii 701]
gi|429122637|ref|ZP_19183203.1| Cold shock protein CspE [Cronobacter sakazakii 680]
gi|449056877|ref|ZP_21735480.1| cold shock protein CspE [Klebsiella pneumoniae hvKP1]
gi|449309066|ref|YP_007441422.1| cold shock protein CspE [Cronobacter sakazakii SP291]
gi|150954076|gb|ABR76106.1| cold shock protein E [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|156533110|gb|ABU77936.1| hypothetical protein ESA_02704 [Cronobacter sakazakii ATCC BAA-894]
gi|259041401|gb|EEW42461.1| CspA family cold shock transcriptional regulator [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|295057869|gb|ADF62607.1| cold shock protein CspE [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295096620|emb|CBK85710.1| cold shock protein E (CspE) [Enterobacter cloacae subsp. cloacae
NCTC 9394]
gi|328535997|gb|EGF62410.1| cold shock-like protein CspE [Klebsiella sp. MS 92-3]
gi|333391533|gb|EGK62648.1| cold shock protein CspA [Enterobacter hormaechei ATCC 49162]
gi|333954482|gb|EGL72330.1| cold shock protein CspE [Cronobacter sakazakii E899]
gi|339760929|gb|AEJ97149.1| cold shock protein CspE [Klebsiella pneumoniae KCTC 2242]
gi|363654608|gb|EHL93497.1| cold shock-like protein CspE [Klebsiella sp. 4_1_44FAA]
gi|364517065|gb|AEW60193.1| Cold shock-like protein cspE [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|387852251|gb|AFK00349.1| cold shock protein CspE [Cronobacter sakazakii ES15]
gi|392324025|gb|AFM58978.1| cold shock protein CspE [Enterobacter cloacae subsp. dissolvens
SDM]
gi|397345476|gb|EJJ38599.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397353501|gb|EJJ46575.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397353689|gb|EJJ46757.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397358808|gb|EJJ51519.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397364246|gb|EJJ56879.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397370553|gb|EJJ63127.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397381572|gb|EJJ73743.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397385596|gb|EJJ77691.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397388193|gb|EJJ80182.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397396452|gb|EJJ88142.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397399603|gb|EJJ91255.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397406975|gb|EJJ98378.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397417608|gb|EJK08773.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397417903|gb|EJK09066.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397423340|gb|EJK14272.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397433919|gb|EJK24562.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397436284|gb|EJK26878.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397442929|gb|EJK33271.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397447415|gb|EJK37609.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397452179|gb|EJK42252.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|400174290|gb|AFP69139.1| cold shock protein CspE [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400216157|gb|EJO47059.1| cold shock-like protein CspE [Enterobacter sp. SST3]
gi|402542687|gb|AFQ66836.1| Cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|403196832|dbj|GAB79613.1| cold shock-like protein CspE [Escherichia blattae NBRC 105725]
gi|405590664|gb|EKB64177.1| cold shock-like protein CspE [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405601410|gb|EKB74563.1| cold shock-like protein CspE [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405606124|gb|EKB79119.1| cold shock-like protein CspE [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405614224|gb|EKB86945.1| cold shock-like protein CspE [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|410113120|emb|CCM85224.1| Cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410122010|emb|CCM87908.1| Cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|414707024|emb|CCN28728.1| cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|423234299|emb|CCK05990.1| Cold shock protein CspE [Cronobacter sakazakii 696]
gi|426285927|emb|CCJ87806.1| Cold shock protein CspE [Cronobacter dublinensis 582]
gi|426290107|emb|CCJ91545.1| Cold shock protein CspE [Cronobacter turicensis 564]
gi|426294573|emb|CCJ95832.1| Cold shock protein CspE [Cronobacter malonaticus 681]
gi|426300392|gb|EKV62679.1| cold shock protein CspE [Klebsiella pneumoniae VA360]
gi|426303164|gb|EKV65343.1| cold shock protein CspE [Klebsiella pneumoniae JHCK1]
gi|426310588|emb|CCJ97314.1| Cold shock protein CspE [Cronobacter malonaticus 507]
gi|426317684|emb|CCK01586.1| Cold shock protein CspE [Cronobacter sakazakii 701]
gi|426322887|emb|CCK13940.1| Cold shock protein CspE [Cronobacter sakazakii 680]
gi|426507207|emb|CCK15248.1| Cold shock protein CspE [Cronobacter universalis NCTC 9529]
gi|426549220|emb|CCJ71249.1| Cold shock protein CspE [Cronobacter condimenti 1330]
gi|426744778|emb|CCJ79585.1| Cold shock protein CspE [Cronobacter dublinensis 1210]
gi|427538129|emb|CCM95750.1| Cold shock protein CspE [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448875478|gb|EMB10494.1| cold shock protein CspE [Klebsiella pneumoniae hvKP1]
gi|449099099|gb|AGE87133.1| cold shock protein CspE [Cronobacter sakazakii SP291]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|15800338|ref|NP_286350.1| cold shock protein CspE [Escherichia coli O157:H7 str. EDL933]
gi|15829916|ref|NP_308689.1| cold shock protein CspE [Escherichia coli O157:H7 str. Sakai]
gi|16128606|ref|NP_415156.1| DNA-binding transcriptional repressor [Escherichia coli str. K-12
substr. MG1655]
gi|30062187|ref|NP_836358.1| cold shock protein CspE [Shigella flexneri 2a str. 2457T]
gi|56479711|ref|NP_706586.2| cold shock protein CspE [Shigella flexneri 2a str. 301]
gi|74311159|ref|YP_309578.1| cold shock protein CspE [Shigella sonnei Ss046]
gi|82543070|ref|YP_407017.1| cold shock protein CspE [Shigella boydii Sb227]
gi|82775893|ref|YP_402240.1| cold shock protein CspE [Shigella dysenteriae Sd197]
gi|110640853|ref|YP_668581.1| cold shock protein CspE [Escherichia coli 536]
gi|157157595|ref|YP_001461790.1| cold shock protein CspE [Escherichia coli E24377A]
gi|157160119|ref|YP_001457437.1| cold shock protein CspE [Escherichia coli HS]
gi|161486286|ref|NP_752643.2| cold shock protein CspE [Escherichia coli CFT073]
gi|161504197|ref|YP_001571309.1| cold shock protein CspE [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|168752651|ref|ZP_02777673.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4113]
gi|168754726|ref|ZP_02779733.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4401]
gi|168770227|ref|ZP_02795234.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4486]
gi|168774688|ref|ZP_02799695.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4196]
gi|168779115|ref|ZP_02804122.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4076]
gi|168786472|ref|ZP_02811479.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC869]
gi|168798185|ref|ZP_02823192.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC508]
gi|170021018|ref|YP_001725972.1| cold shock protein CspE [Escherichia coli ATCC 8739]
gi|170080204|ref|YP_001729524.1| cold shock protein CspE [Escherichia coli str. K-12 substr. DH10B]
gi|170080305|ref|YP_001729625.1| cold shock protein CspE [Escherichia coli str. K-12 substr. DH10B]
gi|170682098|ref|YP_001742740.1| cold shock protein CspE [Escherichia coli SMS-3-5]
gi|170767751|ref|ZP_02902204.1| cold shock protein CspE [Escherichia albertii TW07627]
gi|187731707|ref|YP_001879293.1| cold shock protein CspE [Shigella boydii CDC 3083-94]
gi|188493277|ref|ZP_03000547.1| cold shock DNA-binding protein [Escherichia coli 53638]
gi|191167329|ref|ZP_03029145.1| cold shock protein CspE [Escherichia coli B7A]
gi|191172339|ref|ZP_03033881.1| cold shock protein CspE [Escherichia coli F11]
gi|193063391|ref|ZP_03044481.1| cold shock protein CspE [Escherichia coli E22]
gi|193069066|ref|ZP_03050024.1| cold shock protein CspE [Escherichia coli E110019]
gi|194427975|ref|ZP_03060520.1| cold shock protein CspE [Escherichia coli B171]
gi|194432522|ref|ZP_03064808.1| cold shock protein CspE [Shigella dysenteriae 1012]
gi|194437525|ref|ZP_03069622.1| cold shock protein CspE [Escherichia coli 101-1]
gi|195936173|ref|ZP_03081555.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4024]
gi|208816170|ref|ZP_03257349.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4045]
gi|208823205|ref|ZP_03263523.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4042]
gi|209399192|ref|YP_002269259.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4115]
gi|209917882|ref|YP_002291966.1| cold shock protein CspE [Escherichia coli SE11]
gi|215485665|ref|YP_002328096.1| cold shock protein CspE [Escherichia coli O127:H6 str. E2348/69]
gi|217324540|ref|ZP_03440624.1| cold shock protein CspE [Escherichia coli O157:H7 str. TW14588]
gi|218549799|ref|YP_002383590.1| cold shock protein CspE [Escherichia fergusonii ATCC 35469]
gi|218553166|ref|YP_002386079.1| cold shock protein CspE [Escherichia coli IAI1]
gi|218557563|ref|YP_002390476.1| cold shock protein CspE [Escherichia coli S88]
gi|218688447|ref|YP_002396659.1| cold shock protein CspE [Escherichia coli ED1a]
gi|218694064|ref|YP_002401731.1| cold shock protein CspE [Escherichia coli 55989]
gi|218698996|ref|YP_002406625.1| cold shock protein CspE [Escherichia coli IAI39]
gi|218703957|ref|YP_002411476.1| cold shock protein CspE [Escherichia coli UMN026]
gi|222155379|ref|YP_002555518.1| Cold shock-like protein cspE [Escherichia coli LF82]
gi|227884397|ref|ZP_04002202.1| cold shock protein CspE [Escherichia coli 83972]
gi|238899902|ref|YP_002925698.1| cold shock protein CspE [Escherichia coli BW2952]
gi|251784127|ref|YP_002998431.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli BL21(DE3)]
gi|253774390|ref|YP_003037221.1| cold shock protein CspE [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254160706|ref|YP_003043814.1| cold shock protein CspE [Escherichia coli B str. REL606]
gi|254287494|ref|YP_003053242.1| cold shock protein E [Escherichia coli BL21(DE3)]
gi|254791790|ref|YP_003076627.1| cold shock protein CspE [Escherichia coli O157:H7 str. TW14359]
gi|260842850|ref|YP_003220628.1| DNA-binding transcriptional repressor CspE [Escherichia coli
O103:H2 str. 12009]
gi|260853876|ref|YP_003227767.1| cold shock protein CspE [Escherichia coli O26:H11 str. 11368]
gi|260866772|ref|YP_003233174.1| DNA-binding transcriptional repressor CspE [Escherichia coli
O111:H- str. 11128]
gi|261224091|ref|ZP_05938372.1| cold shock protein CspE [Escherichia coli O157:H7 str. FRIK2000]
gi|261257785|ref|ZP_05950318.1| cold shock protein CspE [Escherichia coli O157:H7 str. FRIK966]
gi|291281575|ref|YP_003498393.1| hypothetical protein G2583_0787 [Escherichia coli O55:H7 str.
CB9615]
gi|293403886|ref|ZP_06647880.1| cold shock-like protein cspE [Escherichia coli FVEC1412]
gi|293408749|ref|ZP_06652588.1| cold shock protein cspE [Escherichia coli B354]
gi|293413920|ref|ZP_06656569.1| cold shock-like protein cspE [Escherichia coli B185]
gi|293418735|ref|ZP_06661170.1| cold shock protein [Escherichia coli B088]
gi|298379662|ref|ZP_06989267.1| cold shock protein CspG [Escherichia coli FVEC1302]
gi|300817859|ref|ZP_07098073.1| cold shock protein CspE [Escherichia coli MS 107-1]
gi|300823062|ref|ZP_07103196.1| cold shock protein CspE [Escherichia coli MS 119-7]
gi|300901127|ref|ZP_07119236.1| cold shock protein CspE [Escherichia coli MS 198-1]
gi|300907798|ref|ZP_07125415.1| cold shock protein CspE [Escherichia coli MS 84-1]
gi|300920567|ref|ZP_07136990.1| cold shock protein CspE [Escherichia coli MS 115-1]
gi|300927278|ref|ZP_07143006.1| cold shock protein CspE [Escherichia coli MS 182-1]
gi|300931553|ref|ZP_07146869.1| cold shock protein CspE [Escherichia coli MS 187-1]
gi|300939622|ref|ZP_07154275.1| cold shock protein CspE [Escherichia coli MS 21-1]
gi|300951119|ref|ZP_07164985.1| cold shock protein CspE [Escherichia coli MS 116-1]
gi|300959188|ref|ZP_07171269.1| cold shock protein CspE [Escherichia coli MS 175-1]
gi|300990086|ref|ZP_07179098.1| cold shock protein CspE [Escherichia coli MS 45-1]
gi|300996792|ref|ZP_07181533.1| cold shock protein CspE [Escherichia coli MS 200-1]
gi|301025248|ref|ZP_07188814.1| cold shock protein CspE [Escherichia coli MS 69-1]
gi|301028903|ref|ZP_07192073.1| cold shock protein CspE [Escherichia coli MS 196-1]
gi|301049818|ref|ZP_07196758.1| cold shock protein CspE [Escherichia coli MS 185-1]
gi|301302102|ref|ZP_07208235.1| cold shock protein CspE [Escherichia coli MS 124-1]
gi|301329140|ref|ZP_07222141.1| cold shock protein CspE [Escherichia coli MS 78-1]
gi|301643967|ref|ZP_07243991.1| cold shock protein CspE [Escherichia coli MS 146-1]
gi|306812944|ref|ZP_07447137.1| cold shock protein CspE [Escherichia coli NC101]
gi|307312660|ref|ZP_07592292.1| cold-shock DNA-binding domain protein [Escherichia coli W]
gi|309785945|ref|ZP_07680574.1| cold shock-like protein cspI [Shigella dysenteriae 1617]
gi|309795509|ref|ZP_07689926.1| cold shock protein CspE [Escherichia coli MS 145-7]
gi|312965070|ref|ZP_07779307.1| cold shock-like protein cspI [Escherichia coli 2362-75]
gi|312970704|ref|ZP_07784885.1| cold shock-like protein cspI [Escherichia coli 1827-70]
gi|331656651|ref|ZP_08357613.1| cold shock protein [Escherichia coli TA206]
gi|331661988|ref|ZP_08362911.1| cold shock protein [Escherichia coli TA143]
gi|331666976|ref|ZP_08367850.1| cold shock protein [Escherichia coli TA271]
gi|331682045|ref|ZP_08382669.1| cold shock protein [Escherichia coli H299]
gi|339998555|ref|YP_004729438.1| cold shock-like protein cspE [Salmonella bongori NCTC 12419]
gi|365105160|ref|ZP_09334552.1| cold shock-like protein CspE [Citrobacter freundii 4_7_47CFAA]
gi|366161443|ref|ZP_09461305.1| cold shock protein CspE [Escherichia sp. TW09308]
gi|378713996|ref|YP_005278889.1| cold-shock protein [Escherichia coli KO11FL]
gi|383177197|ref|YP_005455202.1| cold shock protein CspE [Shigella sonnei 53G]
gi|386279648|ref|ZP_10057326.1| cold shock-like protein CspE [Escherichia sp. 4_1_40B]
gi|386596519|ref|YP_006092919.1| cold-shock protein [Escherichia coli DH1]
gi|386598367|ref|YP_006099873.1| cold shock protein CspE [Escherichia coli IHE3034]
gi|386605454|ref|YP_006111754.1| cold shock protein CspE [Escherichia coli UM146]
gi|386607962|ref|YP_006123448.1| DNA-binding transcriptional repressor [Escherichia coli W]
gi|386612801|ref|YP_006132467.1| cold shock-like protein CspI [Escherichia coli UMNK88]
gi|386623017|ref|YP_006142745.1| DNA-binding transcriptional repressor [Escherichia coli O7:K1 str.
CE10]
gi|386628175|ref|YP_006147895.1| cold shock protein CspE [Escherichia coli str. 'clone D i2']
gi|386633095|ref|YP_006152814.1| cold shock protein CspE [Escherichia coli str. 'clone D i14']
gi|386638002|ref|YP_006104800.1| cold shock-like protein CspE [Escherichia coli ABU 83972]
gi|386702589|ref|YP_006166426.1| cold shock protein CspE [Escherichia coli KO11FL]
gi|386708407|ref|YP_006172128.1| cold shock protein CspE [Escherichia coli W]
gi|387505686|ref|YP_006157942.1| cold shock protein CspE [Escherichia coli O55:H7 str. RM12579]
gi|387606124|ref|YP_006094980.1| cold shock-like protein [Escherichia coli 042]
gi|387611126|ref|YP_006114242.1| cold shock-like protein [Escherichia coli ETEC H10407]
gi|387615910|ref|YP_006118932.1| cold shock protein CspE [Escherichia coli O83:H1 str. NRG 857C]
gi|387620366|ref|YP_006127993.1| cold shock protein CspE [Escherichia coli DH1]
gi|387828616|ref|YP_003348553.1| cold shock-like protein [Escherichia coli SE15]
gi|387881203|ref|YP_006311505.1| cold shock protein CspE [Escherichia coli Xuzhou21]
gi|388476726|ref|YP_488914.1| DNA-binding transcriptional repressor [Escherichia coli str. K-12
substr. W3110]
gi|395227343|ref|ZP_10405669.1| cold shock protein [Citrobacter sp. A1]
gi|404373962|ref|ZP_10979186.1| cold shock-like protein CspE [Escherichia sp. 1_1_43]
gi|407468051|ref|YP_006785507.1| cold shock protein CspE [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407483218|ref|YP_006780367.1| cold shock protein CspE [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483771|ref|YP_006771317.1| cold shock protein CspE [Escherichia coli O104:H4 str. 2009EL-2050]
gi|414574828|ref|ZP_11432037.1| RNA chaperone, negative regulator of cspA transcription [Shigella
sonnei 3233-85]
gi|415776979|ref|ZP_11488231.1| cold shock-like protein cspI [Escherichia coli 3431]
gi|415789958|ref|ZP_11494821.1| cold shock-like protein cspI [Escherichia coli EPECa14]
gi|415804778|ref|ZP_11501087.1| cold shock-like protein cspI [Escherichia coli E128010]
gi|415814825|ref|ZP_11506423.1| cold shock-like protein cspI [Escherichia coli LT-68]
gi|415819008|ref|ZP_11508589.1| cold shock-like protein cspI [Escherichia coli OK1180]
gi|415828051|ref|ZP_11514737.1| cold shock-like protein cspI [Escherichia coli OK1357]
gi|415836471|ref|ZP_11518856.1| cold shock-like protein cspI [Escherichia coli RN587/1]
gi|415852555|ref|ZP_11528920.1| cold shock-like protein cspI [Shigella sonnei 53G]
gi|415855681|ref|ZP_11530970.1| cold shock-like protein cspI [Shigella flexneri 2a str. 2457T]
gi|415864192|ref|ZP_11537315.1| cold shock protein CspE [Escherichia coli MS 85-1]
gi|415876670|ref|ZP_11543045.1| putative cold shock protein [Escherichia coli MS 79-10]
gi|416268457|ref|ZP_11642145.1| Cold shock protein CspE [Shigella dysenteriae CDC 74-1112]
gi|416287169|ref|ZP_11648773.1| Cold shock protein CspE [Shigella boydii ATCC 9905]
gi|416298383|ref|ZP_11651971.1| Cold shock protein CspE [Shigella flexneri CDC 796-83]
gi|416313166|ref|ZP_11658101.1| Cold shock protein CspE [Escherichia coli O157:H7 str. 1044]
gi|416316985|ref|ZP_11660117.1| Cold shock protein CspE [Escherichia coli O157:H7 str. EC1212]
gi|416325447|ref|ZP_11665855.1| Cold shock protein CspE [Escherichia coli O157:H7 str. 1125]
gi|416337858|ref|ZP_11674172.1| Cold shock protein CspE [Escherichia coli WV_060327]
gi|416346289|ref|ZP_11679560.1| Cold shock protein CspE [Escherichia coli EC4100B]
gi|416781337|ref|ZP_11877167.1| cold shock protein CspE [Escherichia coli O157:H7 str. G5101]
gi|416792436|ref|ZP_11882065.1| cold shock protein CspE [Escherichia coli O157:H- str. 493-89]
gi|416803895|ref|ZP_11886936.1| cold shock protein CspE [Escherichia coli O157:H- str. H 2687]
gi|416814812|ref|ZP_11891634.1| cold shock protein CspE [Escherichia coli O55:H7 str. 3256-97]
gi|416824850|ref|ZP_11896219.1| cold shock protein CspE [Escherichia coli O55:H7 str. USDA 5905]
gi|416835742|ref|ZP_11901498.1| cold shock protein CspE [Escherichia coli O157:H7 str. LSU-61]
gi|416896126|ref|ZP_11925990.1| cold shock-like protein cspI [Escherichia coli STEC_7v]
gi|417083098|ref|ZP_11951234.1| cold shock protein CspE [Escherichia coli cloneA_i1]
gi|417118569|ref|ZP_11969087.1| cold shock-like protein CspE [Escherichia coli 1.2741]
gi|417128792|ref|ZP_11975579.1| cold shock-like protein CspE [Escherichia coli 97.0246]
gi|417135404|ref|ZP_11980189.1| cold shock-like protein CspE [Escherichia coli 5.0588]
gi|417139264|ref|ZP_11982686.1| cold shock-like protein CspE [Escherichia coli 97.0259]
gi|417144764|ref|ZP_11986570.1| cold shock-like protein CspE [Escherichia coli 1.2264]
gi|417153242|ref|ZP_11992033.1| cold shock-like protein CspE [Escherichia coli 96.0497]
gi|417167560|ref|ZP_12000342.1| cold shock-like protein CspE [Escherichia coli 99.0741]
gi|417175655|ref|ZP_12005451.1| cold shock-like protein CspE [Escherichia coli 3.2608]
gi|417179426|ref|ZP_12007416.1| cold shock-like protein CspE [Escherichia coli 93.0624]
gi|417193078|ref|ZP_12014925.1| cold shock-like protein CspE [Escherichia coli 4.0522]
gi|417208934|ref|ZP_12020554.1| cold shock-like protein CspE [Escherichia coli JB1-95]
gi|417225039|ref|ZP_12028330.1| cold shock-like protein CspE [Escherichia coli 96.154]
gi|417229747|ref|ZP_12031333.1| cold shock-like protein CspE [Escherichia coli 5.0959]
gi|417246887|ref|ZP_12039988.1| cold shock-like protein CspE [Escherichia coli 9.0111]
gi|417252599|ref|ZP_12044358.1| cold shock-like protein CspE [Escherichia coli 4.0967]
gi|417263726|ref|ZP_12051130.1| cold shock-like protein CspE [Escherichia coli 2.3916]
gi|417268050|ref|ZP_12055411.1| cold shock-like protein CspE [Escherichia coli 3.3884]
gi|417274973|ref|ZP_12062313.1| cold shock-like protein CspE [Escherichia coli 2.4168]
gi|417275542|ref|ZP_12062879.1| cold shock-like protein CspE [Escherichia coli 3.2303]
gi|417284378|ref|ZP_12071673.1| cold shock-like protein CspE [Escherichia coli 3003]
gi|417289066|ref|ZP_12076351.1| cold shock-like protein CspE [Escherichia coli TW07793]
gi|417289521|ref|ZP_12076804.1| cold shock-like protein CspE [Escherichia coli B41]
gi|417294434|ref|ZP_12081708.1| cold shock-like protein CspE [Escherichia coli 900105 (10e)]
gi|417307109|ref|ZP_12093986.1| Cold shock-like protein CspE [Escherichia coli PCN033]
gi|417579896|ref|ZP_12230715.1| cold shock-like protein cspI [Escherichia coli STEC_B2F1]
gi|417585423|ref|ZP_12236200.1| cold shock-like protein cspI [Escherichia coli STEC_C165-02]
gi|417590317|ref|ZP_12241034.1| cold shock-like protein cspI [Escherichia coli 2534-86]
gi|417595556|ref|ZP_12246220.1| cold shock-like protein cspI [Escherichia coli 3030-1]
gi|417600964|ref|ZP_12251547.1| cold shock-like protein cspI [Escherichia coli STEC_94C]
gi|417606733|ref|ZP_12257259.1| cold shock-like protein cspI [Escherichia coli STEC_DG131-3]
gi|417611644|ref|ZP_12262118.1| cold shock-like protein cspI [Escherichia coli STEC_EH250]
gi|417617017|ref|ZP_12267449.1| cold shock-like protein cspI [Escherichia coli G58-1]
gi|417621939|ref|ZP_12272266.1| cold shock-like protein cspI [Escherichia coli STEC_H.1.8]
gi|417627554|ref|ZP_12277801.1| cold shock-like protein cspI [Escherichia coli STEC_MHI813]
gi|417633092|ref|ZP_12283312.1| cold shock-like protein cspI [Escherichia coli STEC_S1191]
gi|417637947|ref|ZP_12288117.1| cold shock-like protein cspI [Escherichia coli TX1999]
gi|417661167|ref|ZP_12310748.1| cold shock protein CspE [Escherichia coli AA86]
gi|417665746|ref|ZP_12315311.1| cold shock-like protein cspI [Escherichia coli STEC_O31]
gi|417671375|ref|ZP_12320868.1| cold shock-like protein cspI [Shigella dysenteriae 155-74]
gi|417688391|ref|ZP_12337635.1| cold shock-like protein cspI [Shigella boydii 5216-82]
gi|417700661|ref|ZP_12349801.1| cold shock-like protein cspI [Shigella flexneri K-218]
gi|417706296|ref|ZP_12355359.1| cold shock-like protein cspI [Shigella flexneri VA-6]
gi|417711166|ref|ZP_12360172.1| cold shock-like protein cspI [Shigella flexneri K-272]
gi|417716124|ref|ZP_12365057.1| cold shock-like protein cspI [Shigella flexneri K-227]
gi|417721695|ref|ZP_12370540.1| cold shock-like protein cspI [Shigella flexneri K-304]
gi|417727101|ref|ZP_12375844.1| cold shock-like protein cspI [Shigella flexneri K-671]
gi|417732134|ref|ZP_12380804.1| cold shock-like protein cspI [Shigella flexneri 2747-71]
gi|417737536|ref|ZP_12386142.1| cold shock-like protein cspI [Shigella flexneri 4343-70]
gi|417742194|ref|ZP_12390745.1| transcription antiterminator and regulator of RNA stability
[Shigella flexneri 2930-71]
gi|417754393|ref|ZP_12402488.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC2B]
gi|417803957|ref|ZP_12450992.1| cold shock protein CspE [Escherichia coli O104:H4 str. LB226692]
gi|417826742|ref|ZP_12473318.1| transcription antiterminator and regulator of RNA stability
[Shigella flexneri J1713]
gi|417831709|ref|ZP_12478231.1| cold shock protein CspE [Escherichia coli O104:H4 str. 01-09591]
gi|417863858|ref|ZP_12508905.1| hypothetical protein C22711_0791 [Escherichia coli O104:H4 str.
C227-11]
gi|417946398|ref|ZP_12589616.1| cold shock protein CspE [Escherichia coli XH140A]
gi|417977533|ref|ZP_12618316.1| cold shock protein CspE [Escherichia coli XH001]
gi|418042714|ref|ZP_12680904.1| cold shock protein CspE [Escherichia coli W26]
gi|418254072|ref|ZP_12878974.1| transcription antiterminator and regulator of RNA stability
[Shigella flexneri 6603-63]
gi|418262653|ref|ZP_12884032.1| transcription antiterminator and regulator of RNA stability
[Shigella sonnei str. Moseley]
gi|418301487|ref|ZP_12913281.1| cold shock-like protein cspI [Escherichia coli UMNF18]
gi|418942273|ref|ZP_13495560.1| cold shock protein CspE [Escherichia coli O157:H43 str. T22]
gi|418944344|ref|ZP_13497418.1| cold shock protein CspE [Escherichia coli O157:H43 str. T22]
gi|418959084|ref|ZP_13510986.1| cold shock protein CspE [Escherichia coli J53]
gi|418995563|ref|ZP_13543177.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC1A]
gi|419000781|ref|ZP_13548340.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC1B]
gi|419006292|ref|ZP_13553748.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC1C]
gi|419012161|ref|ZP_13559526.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC1D]
gi|419017064|ref|ZP_13564390.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC1E]
gi|419022757|ref|ZP_13569999.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC2A]
gi|419027564|ref|ZP_13574763.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC2C]
gi|419033418|ref|ZP_13580516.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC2D]
gi|419038344|ref|ZP_13585404.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC2E]
gi|419043825|ref|ZP_13590798.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3A]
gi|419049230|ref|ZP_13596147.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3B]
gi|419055285|ref|ZP_13602141.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3C]
gi|419060878|ref|ZP_13607661.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3D]
gi|419066783|ref|ZP_13613437.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3E]
gi|419073739|ref|ZP_13619311.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3F]
gi|419078975|ref|ZP_13624458.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4A]
gi|419084596|ref|ZP_13630010.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4B]
gi|419090562|ref|ZP_13635881.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4C]
gi|419096626|ref|ZP_13641870.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4D]
gi|419102361|ref|ZP_13647527.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4E]
gi|419107714|ref|ZP_13652824.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4F]
gi|419113531|ref|ZP_13658565.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC5A]
gi|419119121|ref|ZP_13664102.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC5B]
gi|419124883|ref|ZP_13669784.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC5C]
gi|419130362|ref|ZP_13675213.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC5D]
gi|419135100|ref|ZP_13679907.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC5E]
gi|419141146|ref|ZP_13685901.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC6A]
gi|419146750|ref|ZP_13691446.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC6B]
gi|419152496|ref|ZP_13697082.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC6C]
gi|419157943|ref|ZP_13702466.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC6D]
gi|419162870|ref|ZP_13707349.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC6E]
gi|419168603|ref|ZP_13713000.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC7A]
gi|419174042|ref|ZP_13717897.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC7B]
gi|419179597|ref|ZP_13723222.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC7C]
gi|419185159|ref|ZP_13728681.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC7D]
gi|419190406|ref|ZP_13733874.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC7E]
gi|419195735|ref|ZP_13739141.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC8A]
gi|419201743|ref|ZP_13744970.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC8B]
gi|419207682|ref|ZP_13750808.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC8C]
gi|419214232|ref|ZP_13757262.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC8D]
gi|419219885|ref|ZP_13762842.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC8E]
gi|419225349|ref|ZP_13768236.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9A]
gi|419231089|ref|ZP_13773880.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9B]
gi|419236515|ref|ZP_13779264.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9C]
gi|419242092|ref|ZP_13784740.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9D]
gi|419247538|ref|ZP_13790150.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9E]
gi|419253288|ref|ZP_13795835.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10A]
gi|419259344|ref|ZP_13801798.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10B]
gi|419265370|ref|ZP_13807756.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10C]
gi|419271014|ref|ZP_13813344.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10D]
gi|419276820|ref|ZP_13819083.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10E]
gi|419282545|ref|ZP_13824762.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10F]
gi|419288088|ref|ZP_13830204.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC11A]
gi|419293424|ref|ZP_13835484.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC11B]
gi|419298904|ref|ZP_13840920.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC11C]
gi|419305170|ref|ZP_13847082.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC11D]
gi|419310224|ref|ZP_13852099.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC11E]
gi|419315501|ref|ZP_13857328.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC12A]
gi|419321344|ref|ZP_13863083.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC12B]
gi|419327564|ref|ZP_13869196.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC12C]
gi|419333001|ref|ZP_13874560.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC12D]
gi|419338404|ref|ZP_13879892.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC12E]
gi|419344254|ref|ZP_13885637.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13A]
gi|419348692|ref|ZP_13890045.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13B]
gi|419353606|ref|ZP_13894890.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13C]
gi|419358936|ref|ZP_13900167.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13D]
gi|419363604|ref|ZP_13904786.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13E]
gi|419368894|ref|ZP_13910023.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC14A]
gi|419374293|ref|ZP_13915345.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC14B]
gi|419379569|ref|ZP_13920546.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC14C]
gi|419384776|ref|ZP_13925676.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC14D]
gi|419390024|ref|ZP_13930863.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15A]
gi|419395200|ref|ZP_13935983.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15B]
gi|419400548|ref|ZP_13941281.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15C]
gi|419405724|ref|ZP_13946427.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15D]
gi|419411215|ref|ZP_13951887.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15E]
gi|419699507|ref|ZP_14227123.1| cold shock protein CspE [Escherichia coli SCI-07]
gi|419805019|ref|ZP_14330166.1| cold shock protein CspE [Escherichia coli AI27]
gi|419812464|ref|ZP_14337330.1| cold shock protein CspE [Escherichia coli O32:H37 str. P4]
gi|419863468|ref|ZP_14385996.1| cold shock protein CspE [Escherichia coli O103:H25 str. CVM9340]
gi|419868793|ref|ZP_14391041.1| cold shock protein CspE [Escherichia coli O103:H2 str. CVM9450]
gi|419875859|ref|ZP_14397662.1| cold shock protein CspE [Escherichia coli O111:H11 str. CVM9534]
gi|419889411|ref|ZP_14409818.1| cold shock protein CspE [Escherichia coli O111:H8 str. CVM9570]
gi|419895867|ref|ZP_14415651.1| cold shock protein CspE [Escherichia coli O111:H8 str. CVM9574]
gi|419900351|ref|ZP_14419799.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM9942]
gi|419906216|ref|ZP_14425139.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM10026]
gi|419915320|ref|ZP_14433686.1| cold shock protein CspE [Escherichia coli KD1]
gi|419917152|ref|ZP_14435426.1| cold shock protein CspE [Escherichia coli KD2]
gi|419924393|ref|ZP_14442283.1| cold shock protein CspE [Escherichia coli 541-15]
gi|419928989|ref|ZP_14446686.1| cold shock protein CspE [Escherichia coli 541-1]
gi|419936507|ref|ZP_14453519.1| cold shock protein CspE [Escherichia coli 576-1]
gi|419941213|ref|ZP_14457911.1| cold shock protein CspE [Escherichia coli 75]
gi|419945391|ref|ZP_14461836.1| cold shock protein CspE [Escherichia coli HM605]
gi|419948747|ref|ZP_14465018.1| cold shock protein CspE [Escherichia coli CUMT8]
gi|420087814|ref|ZP_14599751.1| cold shock protein CspE [Escherichia coli O111:H8 str. CVM9602]
gi|420093143|ref|ZP_14604822.1| cold shock protein CspE [Escherichia coli O111:H8 str. CVM9634]
gi|420099961|ref|ZP_14611163.1| cold shock protein CspE [Escherichia coli O111:H11 str. CVM9455]
gi|420108895|ref|ZP_14619105.1| cold shock protein CspE [Escherichia coli O111:H11 str. CVM9553]
gi|420115788|ref|ZP_14625287.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM10021]
gi|420119341|ref|ZP_14628628.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM10030]
gi|420125847|ref|ZP_14634627.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM10224]
gi|420130600|ref|ZP_14639091.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM9952]
gi|420267690|ref|ZP_14770097.1| cold shock-like protein CspE [Escherichia coli PA22]
gi|420273683|ref|ZP_14776016.1| cold shock-like protein CspE [Escherichia coli PA40]
gi|420278570|ref|ZP_14780837.1| cold shock-like protein CspE [Escherichia coli TW06591]
gi|420286446|ref|ZP_14788649.1| cold shock-like protein CspE [Escherichia coli TW10246]
gi|420290759|ref|ZP_14792924.1| cold shock-like protein CspE [Escherichia coli TW11039]
gi|420296419|ref|ZP_14798515.1| cold shock-like protein CspE [Escherichia coli TW09109]
gi|420302567|ref|ZP_14804597.1| cold shock-like protein CspE [Escherichia coli TW10119]
gi|420312702|ref|ZP_14814619.1| cold shock-like protein CspE [Escherichia coli EC1738]
gi|420314892|ref|ZP_14816780.1| cold shock-like protein CspE [Escherichia coli EC1734]
gi|420319054|ref|ZP_14820910.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri 2850-71]
gi|420324336|ref|ZP_14826120.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri CCH060]
gi|420329932|ref|ZP_14831635.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri K-1770]
gi|420334773|ref|ZP_14836394.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri K-315]
gi|420340342|ref|ZP_14841867.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri K-404]
gi|420345876|ref|ZP_14847305.1| RNA chaperone, negative regulator of cspA transcription [Shigella
boydii 965-58]
gi|420351381|ref|ZP_14852576.1| RNA chaperone, negative regulator of cspA transcription [Shigella
boydii 4444-74]
gi|420357292|ref|ZP_14858307.1| RNA chaperone, negative regulator of cspA transcription [Shigella
sonnei 3226-85]
gi|420362249|ref|ZP_14863171.1| transcription antiterminator and regulator of RNA stability
[Shigella sonnei 4822-66]
gi|420367013|ref|ZP_14867830.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri 1235-66]
gi|420370694|ref|ZP_14871216.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri 1235-66]
gi|420378914|ref|ZP_14878409.1| RNA chaperone, negative regulator of cspA transcription [Shigella
dysenteriae 225-75]
gi|420384252|ref|ZP_14883639.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli EPECa12]
gi|420390013|ref|ZP_14889283.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli EPEC C342-62]
gi|421681312|ref|ZP_16121140.1| transcription antiterminator and regulator of RNA stability
[Shigella flexneri 1485-80]
gi|421777025|ref|ZP_16213625.1| cold shock protein CspE [Escherichia coli AD30]
gi|421810858|ref|ZP_16246662.1| cold shock protein CspE [Escherichia coli 8.0416]
gi|421816939|ref|ZP_16252498.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 10.0821]
gi|421822328|ref|ZP_16257765.1| cold shock-like protein CspE [Escherichia coli FRIK920]
gi|421829059|ref|ZP_16264388.1| cold shock-like protein CspE [Escherichia coli PA7]
gi|421843482|ref|ZP_16276642.1| cold shock protein CspE [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|422330892|ref|ZP_16411909.1| cold shock-like protein CspE [Escherichia coli 4_1_47FAA]
gi|422355954|ref|ZP_16436657.1| cold shock protein CspE [Escherichia coli MS 117-3]
gi|422359131|ref|ZP_16439780.1| cold shock protein CspE [Escherichia coli MS 110-3]
gi|422365186|ref|ZP_16445688.1| cold shock protein CspE [Escherichia coli MS 153-1]
gi|422369093|ref|ZP_16449496.1| cold shock protein CspE [Escherichia coli MS 16-3]
gi|422378236|ref|ZP_16458459.1| cold shock protein CspE [Escherichia coli MS 60-1]
gi|422382462|ref|ZP_16462622.1| cold shock protein CspE [Escherichia coli MS 57-2]
gi|422748343|ref|ZP_16802256.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H252]
gi|422753250|ref|ZP_16807077.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H263]
gi|422763452|ref|ZP_16817207.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1167]
gi|422765165|ref|ZP_16818892.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1520]
gi|422769825|ref|ZP_16823516.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E482]
gi|422777304|ref|ZP_16830957.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H120]
gi|422782590|ref|ZP_16835375.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
TW10509]
gi|422785231|ref|ZP_16837970.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H489]
gi|422791410|ref|ZP_16844113.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
TA007]
gi|422799984|ref|ZP_16848482.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
M863]
gi|422804599|ref|ZP_16853031.1| cold-shock DNA-binding domain-containing protein [Escherichia
fergusonii B253]
gi|422816608|ref|ZP_16864823.1| cold shock-like protein CspE [Escherichia coli M919]
gi|422827828|ref|ZP_16876001.1| cold shock-like protein cspE [Escherichia coli B093]
gi|422834688|ref|ZP_16882748.1| cold shock-like protein cspE [Escherichia coli E101]
gi|422839116|ref|ZP_16887088.1| cold shock-like protein cspE [Escherichia coli H397]
gi|422960504|ref|ZP_16971952.1| cold shock-like protein CspE [Escherichia coli H494]
gi|422975486|ref|ZP_16976705.1| cold shock-like protein CspE [Escherichia coli TA124]
gi|422991315|ref|ZP_16982086.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
C227-11]
gi|422993255|ref|ZP_16984019.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
C236-11]
gi|422998465|ref|ZP_16989221.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
09-7901]
gi|423006929|ref|ZP_16997672.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
04-8351]
gi|423008572|ref|ZP_16999310.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-3677]
gi|423022761|ref|ZP_17013464.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-4404]
gi|423027912|ref|ZP_17018605.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-4522]
gi|423033747|ref|ZP_17024431.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-4623]
gi|423036614|ref|ZP_17027288.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423041733|ref|ZP_17032400.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423048421|ref|ZP_17039078.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423052004|ref|ZP_17040812.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423058970|ref|ZP_17047766.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423658893|ref|ZP_17634160.1| cold shock-like protein CspE [Escherichia coli PA31]
gi|423701376|ref|ZP_17675835.1| cold shock-like protein CspE [Escherichia coli H730]
gi|423708562|ref|ZP_17682940.1| cold shock-like protein CspE [Escherichia coli B799]
gi|424075493|ref|ZP_17812851.1| cold shock-like protein CspE [Escherichia coli FDA505]
gi|424081826|ref|ZP_17818695.1| cold shock-like protein CspE [Escherichia coli FDA517]
gi|424088445|ref|ZP_17824712.1| cold shock-like protein CspE [Escherichia coli FRIK1996]
gi|424094668|ref|ZP_17830432.1| cold shock-like protein CspE [Escherichia coli FRIK1985]
gi|424101065|ref|ZP_17836238.1| cold shock-like protein CspE [Escherichia coli FRIK1990]
gi|424107878|ref|ZP_17842467.1| cold shock-like protein CspE [Escherichia coli 93-001]
gi|424113867|ref|ZP_17848029.1| cold shock-like protein CspE [Escherichia coli PA3]
gi|424119925|ref|ZP_17853648.1| cold shock-like protein CspE [Escherichia coli PA5]
gi|424126183|ref|ZP_17859395.1| cold shock-like protein CspE [Escherichia coli PA9]
gi|424132277|ref|ZP_17865089.1| cold shock-like protein CspE [Escherichia coli PA10]
gi|424138818|ref|ZP_17871124.1| cold shock-like protein CspE [Escherichia coli PA14]
gi|424145258|ref|ZP_17877040.1| cold shock-like protein CspE [Escherichia coli PA15]
gi|424151402|ref|ZP_17882667.1| cold shock-like protein CspE [Escherichia coli PA24]
gi|424185141|ref|ZP_17888103.1| cold shock-like protein CspE [Escherichia coli PA25]
gi|424268117|ref|ZP_17894005.1| cold shock-like protein CspE [Escherichia coli PA28]
gi|424423041|ref|ZP_17899733.1| cold shock-like protein CspE [Escherichia coli PA32]
gi|424453805|ref|ZP_17905354.1| cold shock-like protein CspE [Escherichia coli PA33]
gi|424460107|ref|ZP_17911053.1| cold shock-like protein CspE [Escherichia coli PA39]
gi|424466584|ref|ZP_17916784.1| cold shock-like protein CspE [Escherichia coli PA41]
gi|424473142|ref|ZP_17922829.1| cold shock-like protein CspE [Escherichia coli PA42]
gi|424479090|ref|ZP_17928346.1| cold shock-like protein CspE [Escherichia coli TW07945]
gi|424485151|ref|ZP_17934030.1| cold shock-like protein CspE [Escherichia coli TW09098]
gi|424491304|ref|ZP_17939690.1| cold shock-like protein CspE [Escherichia coli TW09195]
gi|424498368|ref|ZP_17945654.1| cold shock-like protein CspE [Escherichia coli EC4203]
gi|424504598|ref|ZP_17951388.1| cold shock-like protein CspE [Escherichia coli EC4196]
gi|424510859|ref|ZP_17957099.1| cold shock-like protein CspE [Escherichia coli TW14313]
gi|424518426|ref|ZP_17962863.1| cold shock-like protein CspE [Escherichia coli TW14301]
gi|424524253|ref|ZP_17968288.1| cold shock-like protein CspE [Escherichia coli EC4421]
gi|424530457|ref|ZP_17974097.1| cold shock-like protein CspE [Escherichia coli EC4422]
gi|424536429|ref|ZP_17979705.1| cold shock-like protein CspE [Escherichia coli EC4013]
gi|424542343|ref|ZP_17985173.1| cold shock-like protein CspE [Escherichia coli EC4402]
gi|424548666|ref|ZP_17990883.1| cold shock-like protein CspE [Escherichia coli EC4439]
gi|424554931|ref|ZP_17996660.1| cold shock-like protein CspE [Escherichia coli EC4436]
gi|424561275|ref|ZP_18002573.1| cold shock-like protein CspE [Escherichia coli EC4437]
gi|424567306|ref|ZP_18008232.1| cold shock-like protein CspE [Escherichia coli EC4448]
gi|424573491|ref|ZP_18013926.1| cold shock-like protein CspE [Escherichia coli EC1845]
gi|424579443|ref|ZP_18019387.1| cold shock-like protein CspE [Escherichia coli EC1863]
gi|424728953|ref|ZP_18157558.1| cold shock protein [Citrobacter sp. L17]
gi|424750298|ref|ZP_18178365.1| cold shock protein CspE [Escherichia coli O26:H11 str. CFSAN001629]
gi|424761487|ref|ZP_18189061.1| cold shock protein CspE [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424768262|ref|ZP_18195550.1| cold shock protein CspE [Escherichia coli O111:H8 str. CFSAN001632]
gi|424817175|ref|ZP_18242326.1| cold shock protein CspE [Escherichia fergusonii ECD227]
gi|425096120|ref|ZP_18499154.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 3.4870]
gi|425102266|ref|ZP_18504922.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 5.2239]
gi|425108056|ref|ZP_18510317.1| cold shock protein CspE [Escherichia coli 6.0172]
gi|425113970|ref|ZP_18515800.1| cold shock protein CspE [Escherichia coli 8.0566]
gi|425118732|ref|ZP_18520461.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 8.0569]
gi|425123885|ref|ZP_18525474.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 8.0586]
gi|425129923|ref|ZP_18531033.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 8.2524]
gi|425136264|ref|ZP_18536998.1| cold shock protein CspE [Escherichia coli 10.0833]
gi|425142165|ref|ZP_18542463.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 10.0869]
gi|425154095|ref|ZP_18553653.1| cold shock-like protein CspE [Escherichia coli PA34]
gi|425160545|ref|ZP_18559729.1| cold shock-like protein CspE [Escherichia coli FDA506]
gi|425166059|ref|ZP_18564878.1| cold shock-like protein CspE [Escherichia coli FDA507]
gi|425172347|ref|ZP_18570755.1| cold shock-like protein CspE [Escherichia coli FDA504]
gi|425178230|ref|ZP_18576294.1| cold shock-like protein CspE [Escherichia coli FRIK1999]
gi|425184380|ref|ZP_18582014.1| cold shock-like protein CspE [Escherichia coli FRIK1997]
gi|425191132|ref|ZP_18588270.1| cold shock-like protein CspE [Escherichia coli NE1487]
gi|425197460|ref|ZP_18594118.1| cold shock-like protein CspE [Escherichia coli NE037]
gi|425204118|ref|ZP_18600256.1| cold shock-like protein CspE [Escherichia coli FRIK2001]
gi|425215917|ref|ZP_18611245.1| cold shock-like protein CspE [Escherichia coli PA23]
gi|425222491|ref|ZP_18617359.1| cold shock-like protein CspE [Escherichia coli PA49]
gi|425228733|ref|ZP_18623138.1| cold shock-like protein CspE [Escherichia coli PA45]
gi|425235033|ref|ZP_18629003.1| cold shock-like protein CspE [Escherichia coli TT12B]
gi|425241031|ref|ZP_18634675.1| cold shock-like protein CspE [Escherichia coli MA6]
gi|425247152|ref|ZP_18640371.1| cold shock-like protein CspE [Escherichia coli 5905]
gi|425252887|ref|ZP_18645773.1| cold shock-like protein CspE [Escherichia coli CB7326]
gi|425259199|ref|ZP_18651572.1| cold shock-like protein CspE [Escherichia coli EC96038]
gi|425265303|ref|ZP_18657233.1| cold shock-like protein CspE [Escherichia coli 5412]
gi|425271303|ref|ZP_18662810.1| cold shock-like protein CspE [Escherichia coli TW15901]
gi|425276474|ref|ZP_18667816.1| cold shock-like protein CspE [Escherichia coli ARS4.2123]
gi|425281981|ref|ZP_18673096.1| cold shock-like protein CspE [Escherichia coli TW00353]
gi|425287180|ref|ZP_18678111.1| cold shock-like protein CspE [Escherichia coli 3006]
gi|425292759|ref|ZP_18683348.1| cold shock-like protein CspE [Escherichia coli PA38]
gi|425298794|ref|ZP_18688844.1| cold shock-like protein CspE [Escherichia coli 07798]
gi|425304110|ref|ZP_18693897.1| cold shock-like protein CspE [Escherichia coli N1]
gi|425309491|ref|ZP_18698964.1| cold shock-like protein CspE [Escherichia coli EC1735]
gi|425315414|ref|ZP_18704497.1| cold shock-like protein CspE [Escherichia coli EC1736]
gi|425321473|ref|ZP_18710151.1| cold shock-like protein CspE [Escherichia coli EC1737]
gi|425327666|ref|ZP_18715894.1| cold shock-like protein CspE [Escherichia coli EC1846]
gi|425333849|ref|ZP_18721576.1| cold shock-like protein CspE [Escherichia coli EC1847]
gi|425340261|ref|ZP_18727510.1| cold shock-like protein CspE [Escherichia coli EC1848]
gi|425346141|ref|ZP_18732949.1| cold shock-like protein CspE [Escherichia coli EC1849]
gi|425352359|ref|ZP_18738746.1| cold shock-like protein CspE [Escherichia coli EC1850]
gi|425358356|ref|ZP_18744335.1| cold shock-like protein CspE [Escherichia coli EC1856]
gi|425364456|ref|ZP_18750013.1| cold shock-like protein CspE [Escherichia coli EC1862]
gi|425370909|ref|ZP_18755878.1| cold shock-like protein CspE [Escherichia coli EC1864]
gi|425377467|ref|ZP_18761859.1| cold shock-like protein CspE [Escherichia coli EC1865]
gi|425383700|ref|ZP_18767585.1| cold shock-like protein CspE [Escherichia coli EC1866]
gi|425390390|ref|ZP_18773855.1| cold shock-like protein CspE [Escherichia coli EC1868]
gi|425396513|ref|ZP_18779565.1| cold shock-like protein CspE [Escherichia coli EC1869]
gi|425402506|ref|ZP_18785115.1| cold shock-like protein CspE [Escherichia coli EC1870]
gi|425409039|ref|ZP_18791201.1| cold shock-like protein CspE [Escherichia coli NE098]
gi|425415321|ref|ZP_18796965.1| cold shock-like protein CspE [Escherichia coli FRIK523]
gi|425421270|ref|ZP_18802485.1| cold shock-like protein CspE [Escherichia coli 0.1288]
gi|425426462|ref|ZP_18807518.1| cold shock-like protein CspE [Escherichia coli 0.1304]
gi|427803696|ref|ZP_18970763.1| cold shock protein [Escherichia coli chi7122]
gi|427808287|ref|ZP_18975352.1| cold shock protein [Escherichia coli]
gi|428945137|ref|ZP_19017780.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 88.1467]
gi|428951287|ref|ZP_19023416.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 88.1042]
gi|428957143|ref|ZP_19028834.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 89.0511]
gi|428963457|ref|ZP_19034647.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 90.0091]
gi|428976098|ref|ZP_19046273.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 90.2281]
gi|428981844|ref|ZP_19051579.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 93.0055]
gi|428999992|ref|ZP_19068501.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 95.0183]
gi|429006241|ref|ZP_19074151.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 95.1288]
gi|429012568|ref|ZP_19079823.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 95.0943]
gi|429018813|ref|ZP_19085596.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0428]
gi|429024464|ref|ZP_19090876.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0427]
gi|429036964|ref|ZP_19102405.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0932]
gi|429048676|ref|ZP_19113333.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 97.0003]
gi|429054046|ref|ZP_19118535.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 97.1742]
gi|429065193|ref|ZP_19129054.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0672]
gi|429071751|ref|ZP_19135104.1| cold shock protein CspE [Escherichia coli 99.0678]
gi|429077067|ref|ZP_19140282.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0713]
gi|429722799|ref|ZP_19257694.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429774896|ref|ZP_19306899.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02030]
gi|429780161|ref|ZP_19312113.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02033-1]
gi|429784211|ref|ZP_19316124.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02092]
gi|429789549|ref|ZP_19321424.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02093]
gi|429795779|ref|ZP_19327605.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02281]
gi|429801705|ref|ZP_19333483.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02318]
gi|429805337|ref|ZP_19337084.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02913]
gi|429810148|ref|ZP_19341850.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-03439]
gi|429815908|ref|ZP_19347567.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-04080]
gi|429821496|ref|ZP_19353109.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-03943]
gi|429824262|ref|ZP_19355759.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0109]
gi|429830613|ref|ZP_19361468.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 97.0010]
gi|429907169|ref|ZP_19373138.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429911365|ref|ZP_19377321.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429917204|ref|ZP_19383144.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429922242|ref|ZP_19388163.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429928058|ref|ZP_19393964.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429931988|ref|ZP_19397883.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429933592|ref|ZP_19399482.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429939248|ref|ZP_19405122.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429946891|ref|ZP_19412746.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949523|ref|ZP_19415371.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429957805|ref|ZP_19423634.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432352539|ref|ZP_19595825.1| cold shock-like protein CspE [Escherichia coli KTE2]
gi|432356937|ref|ZP_19600184.1| cold shock-like protein CspE [Escherichia coli KTE4]
gi|432361409|ref|ZP_19604594.1| cold shock-like protein CspE [Escherichia coli KTE5]
gi|432368577|ref|ZP_19611682.1| cold shock-like protein CspE [Escherichia coli KTE10]
gi|432371366|ref|ZP_19614427.1| cold shock-like protein CspE [Escherichia coli KTE11]
gi|432375744|ref|ZP_19618756.1| cold shock-like protein CspE [Escherichia coli KTE12]
gi|432380275|ref|ZP_19623233.1| cold shock-like protein CspE [Escherichia coli KTE15]
gi|432386046|ref|ZP_19628944.1| cold shock-like protein CspE [Escherichia coli KTE16]
gi|432390621|ref|ZP_19633481.1| cold shock-like protein CspE [Escherichia coli KTE21]
gi|432396527|ref|ZP_19639314.1| cold shock-like protein CspE [Escherichia coli KTE25]
gi|432400777|ref|ZP_19643532.1| cold shock-like protein CspE [Escherichia coli KTE26]
gi|432405459|ref|ZP_19648181.1| cold shock-like protein CspE [Escherichia coli KTE28]
gi|432410652|ref|ZP_19653335.1| cold shock-like protein CspE [Escherichia coli KTE39]
gi|432415552|ref|ZP_19658183.1| cold shock-like protein CspE [Escherichia coli KTE44]
gi|432420712|ref|ZP_19663268.1| cold shock-like protein CspE [Escherichia coli KTE178]
gi|432424830|ref|ZP_19667347.1| cold shock-like protein CspE [Escherichia coli KTE181]
gi|432430700|ref|ZP_19673145.1| cold shock-like protein CspE [Escherichia coli KTE187]
gi|432435228|ref|ZP_19677629.1| cold shock-like protein CspE [Escherichia coli KTE188]
gi|432439970|ref|ZP_19682325.1| cold shock-like protein CspE [Escherichia coli KTE189]
gi|432445083|ref|ZP_19687391.1| cold shock-like protein CspE [Escherichia coli KTE191]
gi|432453392|ref|ZP_19695630.1| cold shock-like protein CspE [Escherichia coli KTE193]
gi|432455513|ref|ZP_19697715.1| cold shock-like protein CspE [Escherichia coli KTE201]
gi|432459652|ref|ZP_19701810.1| cold shock-like protein CspE [Escherichia coli KTE204]
gi|432464612|ref|ZP_19706720.1| cold shock-like protein CspE [Escherichia coli KTE205]
gi|432470021|ref|ZP_19712074.1| cold shock-like protein CspE [Escherichia coli KTE206]
gi|432474690|ref|ZP_19716699.1| cold shock-like protein CspE [Escherichia coli KTE208]
gi|432480016|ref|ZP_19721980.1| cold shock-like protein CspE [Escherichia coli KTE210]
gi|432484331|ref|ZP_19726254.1| cold shock-like protein CspE [Escherichia coli KTE212]
gi|432488176|ref|ZP_19730063.1| cold shock-like protein CspE [Escherichia coli KTE213]
gi|432494453|ref|ZP_19736271.1| cold shock-like protein CspE [Escherichia coli KTE214]
gi|432498847|ref|ZP_19740625.1| cold shock-like protein CspE [Escherichia coli KTE216]
gi|432503292|ref|ZP_19745029.1| cold shock-like protein CspE [Escherichia coli KTE220]
gi|432512847|ref|ZP_19750083.1| cold shock-like protein CspE [Escherichia coli KTE224]
gi|432521326|ref|ZP_19758484.1| cold shock-like protein CspE [Escherichia coli KTE228]
gi|432522737|ref|ZP_19759876.1| cold shock-like protein CspE [Escherichia coli KTE230]
gi|432529962|ref|ZP_19767005.1| cold shock-like protein CspE [Escherichia coli KTE233]
gi|432532782|ref|ZP_19769781.1| cold shock-like protein CspE [Escherichia coli KTE234]
gi|432536639|ref|ZP_19773558.1| cold shock-like protein CspE [Escherichia coli KTE235]
gi|432541981|ref|ZP_19778840.1| cold shock-like protein CspE [Escherichia coli KTE236]
gi|432547325|ref|ZP_19784120.1| cold shock-like protein CspE [Escherichia coli KTE237]
gi|432552599|ref|ZP_19789330.1| cold shock-like protein CspE [Escherichia coli KTE47]
gi|432557618|ref|ZP_19794308.1| cold shock-like protein CspE [Escherichia coli KTE49]
gi|432562506|ref|ZP_19799133.1| cold shock-like protein CspE [Escherichia coli KTE51]
gi|432567423|ref|ZP_19803950.1| cold shock-like protein CspE [Escherichia coli KTE53]
gi|432572586|ref|ZP_19809077.1| cold shock-like protein CspE [Escherichia coli KTE55]
gi|432579285|ref|ZP_19815719.1| cold shock-like protein CspE [Escherichia coli KTE56]
gi|432582710|ref|ZP_19819120.1| cold shock-like protein CspE [Escherichia coli KTE57]
gi|432586890|ref|ZP_19823262.1| cold shock-like protein CspE [Escherichia coli KTE58]
gi|432591702|ref|ZP_19828031.1| cold shock-like protein CspE [Escherichia coli KTE60]
gi|432596533|ref|ZP_19832816.1| cold shock-like protein CspE [Escherichia coli KTE62]
gi|432601173|ref|ZP_19837426.1| cold shock-like protein CspE [Escherichia coli KTE66]
gi|432606468|ref|ZP_19842664.1| cold shock-like protein CspE [Escherichia coli KTE67]
gi|432610323|ref|ZP_19846495.1| cold shock-like protein CspE [Escherichia coli KTE72]
gi|432615450|ref|ZP_19851581.1| cold shock-like protein CspE [Escherichia coli KTE75]
gi|432620709|ref|ZP_19856753.1| cold shock-like protein CspE [Escherichia coli KTE76]
gi|432626178|ref|ZP_19862163.1| cold shock-like protein CspE [Escherichia coli KTE77]
gi|432630255|ref|ZP_19866200.1| cold shock-like protein CspE [Escherichia coli KTE80]
gi|432635908|ref|ZP_19871794.1| cold shock-like protein CspE [Escherichia coli KTE81]
gi|432639798|ref|ZP_19875639.1| cold shock-like protein CspE [Escherichia coli KTE83]
gi|432645081|ref|ZP_19880881.1| cold shock-like protein CspE [Escherichia coli KTE86]
gi|432650112|ref|ZP_19885874.1| cold shock-like protein CspE [Escherichia coli KTE87]
gi|432654879|ref|ZP_19890592.1| cold shock-like protein CspE [Escherichia coli KTE93]
gi|432659861|ref|ZP_19895516.1| cold shock-like protein CspE [Escherichia coli KTE111]
gi|432664865|ref|ZP_19900453.1| cold shock-like protein CspE [Escherichia coli KTE116]
gi|432669539|ref|ZP_19905084.1| cold shock-like protein CspE [Escherichia coli KTE119]
gi|432673600|ref|ZP_19909095.1| cold shock-like protein CspE [Escherichia coli KTE142]
gi|432679062|ref|ZP_19914463.1| cold shock-like protein CspE [Escherichia coli KTE143]
gi|432684436|ref|ZP_19919754.1| cold shock-like protein CspE [Escherichia coli KTE156]
gi|432690524|ref|ZP_19925770.1| cold shock-like protein CspE [Escherichia coli KTE161]
gi|432693388|ref|ZP_19928600.1| cold shock-like protein CspE [Escherichia coli KTE162]
gi|432697958|ref|ZP_19933126.1| cold shock-like protein CspE [Escherichia coli KTE169]
gi|432703169|ref|ZP_19938294.1| cold shock-like protein CspE [Escherichia coli KTE171]
gi|432709434|ref|ZP_19944501.1| cold shock-like protein CspE [Escherichia coli KTE6]
gi|432712309|ref|ZP_19947361.1| cold shock-like protein CspE [Escherichia coli KTE8]
gi|432717676|ref|ZP_19952676.1| cold shock-like protein CspE [Escherichia coli KTE9]
gi|432722157|ref|ZP_19957082.1| cold shock-like protein CspE [Escherichia coli KTE17]
gi|432726700|ref|ZP_19961582.1| cold shock-like protein CspE [Escherichia coli KTE18]
gi|432731315|ref|ZP_19966153.1| cold shock-like protein CspE [Escherichia coli KTE45]
gi|432736136|ref|ZP_19970911.1| cold shock-like protein CspE [Escherichia coli KTE42]
gi|432740386|ref|ZP_19975108.1| cold shock-like protein CspE [Escherichia coli KTE23]
gi|432744578|ref|ZP_19979279.1| cold shock-like protein CspE [Escherichia coli KTE43]
gi|432749070|ref|ZP_19983688.1| cold shock-like protein CspE [Escherichia coli KTE29]
gi|432753388|ref|ZP_19987956.1| cold shock-like protein CspE [Escherichia coli KTE22]
gi|432758393|ref|ZP_19992897.1| cold shock-like protein CspE [Escherichia coli KTE46]
gi|432763962|ref|ZP_19998412.1| cold shock-like protein CspE [Escherichia coli KTE48]
gi|432769480|ref|ZP_20003835.1| cold shock-like protein CspE [Escherichia coli KTE50]
gi|432773810|ref|ZP_20008097.1| cold shock-like protein CspE [Escherichia coli KTE54]
gi|432777529|ref|ZP_20011780.1| cold shock-like protein CspE [Escherichia coli KTE59]
gi|432782491|ref|ZP_20016677.1| cold shock-like protein CspE [Escherichia coli KTE63]
gi|432786318|ref|ZP_20020484.1| cold shock-like protein CspE [Escherichia coli KTE65]
gi|432791855|ref|ZP_20025948.1| cold shock-like protein CspE [Escherichia coli KTE78]
gi|432797820|ref|ZP_20031847.1| cold shock-like protein CspE [Escherichia coli KTE79]
gi|432800872|ref|ZP_20034860.1| cold shock-like protein CspE [Escherichia coli KTE84]
gi|432804713|ref|ZP_20038658.1| cold shock-like protein CspE [Escherichia coli KTE91]
gi|432812740|ref|ZP_20046588.1| cold shock-like protein CspE [Escherichia coli KTE101]
gi|432814174|ref|ZP_20047966.1| cold shock-like protein CspE [Escherichia coli KTE115]
gi|432819910|ref|ZP_20053624.1| cold shock-like protein CspE [Escherichia coli KTE118]
gi|432826124|ref|ZP_20059780.1| cold shock-like protein CspE [Escherichia coli KTE123]
gi|432830590|ref|ZP_20064196.1| cold shock-like protein CspE [Escherichia coli KTE135]
gi|432833656|ref|ZP_20067202.1| cold shock-like protein CspE [Escherichia coli KTE136]
gi|432838193|ref|ZP_20071683.1| cold shock-like protein CspE [Escherichia coli KTE140]
gi|432842871|ref|ZP_20076292.1| cold shock-like protein CspE [Escherichia coli KTE141]
gi|432848948|ref|ZP_20080318.1| cold shock-like protein CspE [Escherichia coli KTE144]
gi|432859360|ref|ZP_20085431.1| cold shock-like protein CspE [Escherichia coli KTE146]
gi|432873259|ref|ZP_20092957.1| cold shock-like protein CspE [Escherichia coli KTE147]
gi|432880093|ref|ZP_20096913.1| cold shock-like protein CspE [Escherichia coli KTE154]
gi|432884905|ref|ZP_20099585.1| cold shock-like protein CspE [Escherichia coli KTE158]
gi|432893368|ref|ZP_20105380.1| cold shock-like protein CspE [Escherichia coli KTE165]
gi|432897462|ref|ZP_20108371.1| cold shock-like protein CspE [Escherichia coli KTE192]
gi|432902984|ref|ZP_20112601.1| cold shock-like protein CspE [Escherichia coli KTE194]
gi|432910910|ref|ZP_20117474.1| cold shock-like protein CspE [Escherichia coli KTE190]
gi|432917780|ref|ZP_20122263.1| cold shock-like protein CspE [Escherichia coli KTE173]
gi|432925086|ref|ZP_20127177.1| cold shock-like protein CspE [Escherichia coli KTE175]
gi|432932969|ref|ZP_20132823.1| cold shock-like protein CspE [Escherichia coli KTE184]
gi|432942599|ref|ZP_20139858.1| cold shock-like protein CspE [Escherichia coli KTE183]
gi|432945786|ref|ZP_20141568.1| cold shock-like protein CspE [Escherichia coli KTE196]
gi|432953758|ref|ZP_20146028.1| cold shock-like protein CspE [Escherichia coli KTE197]
gi|432960123|ref|ZP_20150329.1| cold shock-like protein CspE [Escherichia coli KTE202]
gi|432966738|ref|ZP_20155655.1| cold shock-like protein CspE [Escherichia coli KTE203]
gi|432970765|ref|ZP_20159643.1| cold shock-like protein CspE [Escherichia coli KTE207]
gi|432977308|ref|ZP_20166133.1| cold shock-like protein CspE [Escherichia coli KTE209]
gi|432980106|ref|ZP_20168885.1| cold shock-like protein CspE [Escherichia coli KTE211]
gi|432984281|ref|ZP_20173019.1| cold shock-like protein CspE [Escherichia coli KTE215]
gi|432989698|ref|ZP_20178366.1| cold shock-like protein CspE [Escherichia coli KTE217]
gi|432994379|ref|ZP_20182996.1| cold shock-like protein CspE [Escherichia coli KTE218]
gi|432998798|ref|ZP_20187338.1| cold shock-like protein CspE [Escherichia coli KTE223]
gi|433004118|ref|ZP_20192556.1| cold shock-like protein CspE [Escherichia coli KTE227]
gi|433011327|ref|ZP_20199732.1| cold shock-like protein CspE [Escherichia coli KTE229]
gi|433012823|ref|ZP_20201201.1| cold shock-like protein CspE [Escherichia coli KTE104]
gi|433017597|ref|ZP_20205863.1| cold shock-like protein CspE [Escherichia coli KTE105]
gi|433027632|ref|ZP_20215507.1| cold shock-like protein CspE [Escherichia coli KTE109]
gi|433032116|ref|ZP_20219904.1| cold shock-like protein CspE [Escherichia coli KTE112]
gi|433037584|ref|ZP_20225201.1| cold shock-like protein CspE [Escherichia coli KTE113]
gi|433042134|ref|ZP_20229663.1| cold shock-like protein CspE [Escherichia coli KTE117]
gi|433046759|ref|ZP_20234178.1| cold shock-like protein CspE [Escherichia coli KTE120]
gi|433051947|ref|ZP_20239177.1| cold shock-like protein CspE [Escherichia coli KTE122]
gi|433056944|ref|ZP_20244028.1| cold shock-like protein CspE [Escherichia coli KTE124]
gi|433061875|ref|ZP_20248834.1| cold shock-like protein CspE [Escherichia coli KTE125]
gi|433066869|ref|ZP_20253702.1| cold shock-like protein CspE [Escherichia coli KTE128]
gi|433071699|ref|ZP_20258395.1| cold shock-like protein CspE [Escherichia coli KTE129]
gi|433076785|ref|ZP_20263351.1| cold shock-like protein CspE [Escherichia coli KTE131]
gi|433081535|ref|ZP_20268009.1| cold shock-like protein CspE [Escherichia coli KTE133]
gi|433086257|ref|ZP_20272654.1| cold shock-like protein CspE [Escherichia coli KTE137]
gi|433090961|ref|ZP_20277263.1| cold shock-like protein CspE [Escherichia coli KTE138]
gi|433095529|ref|ZP_20281742.1| cold shock-like protein CspE [Escherichia coli KTE139]
gi|433100161|ref|ZP_20286271.1| cold shock-like protein CspE [Escherichia coli KTE145]
gi|433104738|ref|ZP_20290759.1| cold shock-like protein CspE [Escherichia coli KTE148]
gi|433109920|ref|ZP_20295796.1| cold shock-like protein CspE [Escherichia coli KTE150]
gi|433114535|ref|ZP_20300351.1| cold shock-like protein CspE [Escherichia coli KTE153]
gi|433119200|ref|ZP_20304909.1| cold shock-like protein CspE [Escherichia coli KTE157]
gi|433124152|ref|ZP_20309743.1| cold shock-like protein CspE [Escherichia coli KTE160]
gi|433128991|ref|ZP_20314464.1| cold shock-like protein CspE [Escherichia coli KTE163]
gi|433133807|ref|ZP_20319185.1| cold shock-like protein CspE [Escherichia coli KTE166]
gi|433138213|ref|ZP_20323500.1| cold shock-like protein CspE [Escherichia coli KTE167]
gi|433143228|ref|ZP_20328396.1| cold shock-like protein CspE [Escherichia coli KTE168]
gi|433148041|ref|ZP_20333107.1| cold shock-like protein CspE [Escherichia coli KTE174]
gi|433152741|ref|ZP_20337709.1| cold shock-like protein CspE [Escherichia coli KTE176]
gi|433157606|ref|ZP_20342475.1| cold shock-like protein CspE [Escherichia coli KTE177]
gi|433162439|ref|ZP_20347200.1| cold shock-like protein CspE [Escherichia coli KTE179]
gi|433167452|ref|ZP_20352120.1| cold shock-like protein CspE [Escherichia coli KTE180]
gi|433172465|ref|ZP_20357022.1| cold shock-like protein CspE [Escherichia coli KTE232]
gi|433177105|ref|ZP_20361560.1| cold shock-like protein CspE [Escherichia coli KTE82]
gi|433182187|ref|ZP_20366484.1| cold shock-like protein CspE [Escherichia coli KTE85]
gi|433187436|ref|ZP_20371556.1| cold shock-like protein CspE [Escherichia coli KTE88]
gi|433192581|ref|ZP_20376598.1| cold shock-like protein CspE [Escherichia coli KTE90]
gi|433197216|ref|ZP_20381142.1| cold shock-like protein CspE [Escherichia coli KTE94]
gi|433202117|ref|ZP_20385921.1| cold shock-like protein CspE [Escherichia coli KTE95]
gi|433206767|ref|ZP_20390466.1| cold shock-like protein CspE [Escherichia coli KTE97]
gi|433211513|ref|ZP_20395128.1| cold shock-like protein CspE [Escherichia coli KTE99]
gi|433323326|ref|ZP_20400675.1| cold shock protein CspE [Escherichia coli J96]
gi|440288573|ref|YP_007341338.1| cold shock protein [Enterobacteriaceae bacterium strain FGI 57]
gi|442595645|ref|ZP_21013488.1| Cold shock protein CspE [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442596965|ref|ZP_21014765.1| Cold shock protein CspE [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|442606857|ref|ZP_21021652.1| Cold shock protein CspE [Escherichia coli Nissle 1917]
gi|443616660|ref|YP_007380516.1| cold shock protein CspE [Escherichia coli APEC O78]
gi|444929266|ref|ZP_21248415.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0814]
gi|444934617|ref|ZP_21253555.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0815]
gi|444940195|ref|ZP_21258839.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0816]
gi|444945796|ref|ZP_21264213.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0839]
gi|444951341|ref|ZP_21269563.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0848]
gi|444956795|ref|ZP_21274791.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1753]
gi|444962063|ref|ZP_21279812.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1775]
gi|444967827|ref|ZP_21285300.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1793]
gi|444978877|ref|ZP_21295868.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli ATCC 700728]
gi|444984167|ref|ZP_21301033.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA11]
gi|444989407|ref|ZP_21306145.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA19]
gi|444994760|ref|ZP_21311353.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA13]
gi|445000264|ref|ZP_21316723.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA2]
gi|445005723|ref|ZP_21322059.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA47]
gi|445010885|ref|ZP_21327075.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA48]
gi|445022117|ref|ZP_21338036.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 7.1982]
gi|445027359|ref|ZP_21343134.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1781]
gi|445032857|ref|ZP_21348478.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1762]
gi|445038551|ref|ZP_21354018.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA35]
gi|445043762|ref|ZP_21359098.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 3.4880]
gi|445049326|ref|ZP_21364492.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 95.0083]
gi|445054988|ref|ZP_21369936.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0670]
gi|450186070|ref|ZP_21889372.1| cold shock protein CspE [Escherichia coli SEPT362]
gi|450211597|ref|ZP_21894374.1| cold shock protein CspE [Escherichia coli O08]
gi|450240105|ref|ZP_21899237.1| cold shock protein CspE [Escherichia coli S17]
gi|452969750|ref|ZP_21967977.1| RNA chaperone/anti-terminator [Escherichia coli O157:H7 str.
EC4009]
gi|71154156|sp|P0A974.2|CSPE_ECO57 RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|71154157|sp|P0A973.2|CSPE_ECOL6 RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|71154158|sp|P0A972.2|CSPE_ECOLI RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|71154159|sp|P0A975.2|CSPE_SHIFL RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|334305782|sp|E0J1Q3.1|CSPE_ECOLW RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|12513525|gb|AAG54958.1|AE005242_2 cold shock protein [Escherichia coli O157:H7 str. EDL933]
gi|471099|dbj|BAA05856.1| CspE (MsmC) [Escherichia coli]
gi|833769|gb|AAA67556.1| gicA [Escherichia coli str. K-12 substr. W3110]
gi|1651256|dbj|BAA35266.1| DNA-binding transcriptional repressor [Escherichia coli str. K12
substr. W3110]
gi|1786841|gb|AAC73724.1| DNA-binding transcriptional repressor [Escherichia coli str. K-12
substr. MG1655]
gi|3851642|gb|AAC72388.1| unknown [Vibrio cholerae]
gi|13360120|dbj|BAB34085.1| cold shock protein [Escherichia coli O157:H7 str. Sakai]
gi|26986712|gb|AAN86720.1| CspE [Escherichia coli]
gi|30040432|gb|AAP16164.1| cold shock protein [Shigella flexneri 2a str. 2457T]
gi|56383262|gb|AAN42293.2| cold shock protein [Shigella flexneri 2a str. 301]
gi|73854636|gb|AAZ87343.1| cold shock protein [Shigella sonnei Ss046]
gi|81240041|gb|ABB60751.1| cold shock protein [Shigella dysenteriae Sd197]
gi|81244481|gb|ABB65189.1| cold shock protein [Shigella boydii Sb227]
gi|110342445|gb|ABG68682.1| cold shock-like protein CspE [Escherichia coli 536]
gi|157065799|gb|ABV05054.1| cold shock protein CspE [Escherichia coli HS]
gi|157079625|gb|ABV19333.1| cold shock protein CspE [Escherichia coli E24377A]
gi|160865544|gb|ABX22167.1| hypothetical protein SARI_02304 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|169755946|gb|ACA78645.1| cold-shock DNA-binding domain protein [Escherichia coli ATCC 8739]
gi|169888039|gb|ACB01746.1| DNA-binding transcriptional repressor [Escherichia coli str. K-12
substr. DH10B]
gi|169888140|gb|ACB01847.1| DNA-binding transcriptional repressor [Escherichia coli str. K-12
substr. DH10B]
gi|170123239|gb|EDS92170.1| cold shock protein CspE [Escherichia albertii TW07627]
gi|170519816|gb|ACB17994.1| cold shock protein CspE [Escherichia coli SMS-3-5]
gi|187428699|gb|ACD07973.1| cold shock protein CspE [Shigella boydii CDC 3083-94]
gi|187769726|gb|EDU33570.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4196]
gi|188013582|gb|EDU51704.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4113]
gi|188488476|gb|EDU63579.1| cold shock DNA-binding protein [Escherichia coli 53638]
gi|189002843|gb|EDU71829.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4076]
gi|189358116|gb|EDU76535.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4401]
gi|189360875|gb|EDU79294.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4486]
gi|189373655|gb|EDU92071.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC869]
gi|189379324|gb|EDU97740.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC508]
gi|190902578|gb|EDV62311.1| cold shock protein CspE [Escherichia coli B7A]
gi|190907438|gb|EDV67035.1| cold shock protein CspE [Escherichia coli F11]
gi|192930975|gb|EDV83579.1| cold shock protein CspE [Escherichia coli E22]
gi|192957610|gb|EDV88055.1| cold shock protein CspE [Escherichia coli E110019]
gi|194413950|gb|EDX30227.1| cold shock protein CspE [Escherichia coli B171]
gi|194419083|gb|EDX35166.1| cold shock protein CspE [Shigella dysenteriae 1012]
gi|194423694|gb|EDX39684.1| cold shock protein CspE [Escherichia coli 101-1]
gi|208732818|gb|EDZ81506.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4045]
gi|208737398|gb|EDZ85082.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4042]
gi|209160592|gb|ACI38025.1| cold shock protein CspE [Escherichia coli O157:H7 str. EC4115]
gi|209777218|gb|ACI86921.1| cold shock protein [Escherichia coli]
gi|209777220|gb|ACI86922.1| cold shock protein [Escherichia coli]
gi|209777222|gb|ACI86923.1| cold shock protein [Escherichia coli]
gi|209777224|gb|ACI86924.1| cold shock protein [Escherichia coli]
gi|209777226|gb|ACI86925.1| cold shock protein [Escherichia coli]
gi|209911141|dbj|BAG76215.1| cold shock-like protein [Escherichia coli SE11]
gi|215263737|emb|CAS08072.1| DNA-binding transcriptional repressor [Escherichia coli O127:H6
str. E2348/69]
gi|217320761|gb|EEC29185.1| cold shock protein CspE [Escherichia coli O157:H7 str. TW14588]
gi|218350796|emb|CAU96488.1| DNA-binding transcriptional repressor [Escherichia coli 55989]
gi|218357340|emb|CAQ89977.1| DNA-binding transcriptional repressor [Escherichia fergusonii ATCC
35469]
gi|218359934|emb|CAQ97477.1| DNA-binding transcriptional repressor [Escherichia coli IAI1]
gi|218364332|emb|CAR02005.1| DNA-binding transcriptional repressor [Escherichia coli S88]
gi|218368982|emb|CAR16736.1| DNA-binding transcriptional repressor [Escherichia coli IAI39]
gi|218426011|emb|CAR06828.1| DNA-binding transcriptional repressor [Escherichia coli ED1a]
gi|218431054|emb|CAR11930.1| DNA-binding transcriptional repressor [Escherichia coli UMN026]
gi|222032384|emb|CAP75123.1| Cold shock-like protein cspE [Escherichia coli LF82]
gi|227838483|gb|EEJ48949.1| cold shock protein CspE [Escherichia coli 83972]
gi|238860974|gb|ACR62972.1| DNA-binding transcriptional repressor [Escherichia coli BW2952]
gi|242376400|emb|CAQ31099.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli BL21(DE3)]
gi|253325434|gb|ACT30036.1| cold-shock DNA-binding domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972607|gb|ACT38278.1| cold shock protein E [Escherichia coli B str. REL606]
gi|253976801|gb|ACT42471.1| cold shock protein E [Escherichia coli BL21(DE3)]
gi|254591190|gb|ACT70551.1| DNA-binding transcriptional repressor [Escherichia coli O157:H7
str. TW14359]
gi|257752525|dbj|BAI24027.1| DNA-binding transcriptional repressor CspE [Escherichia coli
O26:H11 str. 11368]
gi|257757997|dbj|BAI29494.1| DNA-binding transcriptional repressor CspE [Escherichia coli
O103:H2 str. 12009]
gi|257763128|dbj|BAI34623.1| DNA-binding transcriptional repressor CspE [Escherichia coli
O111:H- str. 11128]
gi|260450208|gb|ACX40630.1| cold-shock DNA-binding domain protein [Escherichia coli DH1]
gi|281177773|dbj|BAI54103.1| cold shock-like protein [Escherichia coli SE15]
gi|284920424|emb|CBG33485.1| cold shock-like protein [Escherichia coli 042]
gi|290761448|gb|ADD55409.1| hypothetical protein G2583_0787 [Escherichia coli O55:H7 str.
CB9615]
gi|291325263|gb|EFE64678.1| cold shock protein [Escherichia coli B088]
gi|291428472|gb|EFF01497.1| cold shock-like protein cspE [Escherichia coli FVEC1412]
gi|291433978|gb|EFF06951.1| cold shock-like protein cspE [Escherichia coli B185]
gi|291471927|gb|EFF14410.1| cold shock protein cspE [Escherichia coli B354]
gi|294494060|gb|ADE92816.1| cold shock protein CspE [Escherichia coli IHE3034]
gi|298279360|gb|EFI20868.1| cold shock protein CspG [Escherichia coli FVEC1302]
gi|299878114|gb|EFI86325.1| cold shock protein CspE [Escherichia coli MS 196-1]
gi|300298413|gb|EFJ54798.1| cold shock protein CspE [Escherichia coli MS 185-1]
gi|300304394|gb|EFJ58914.1| cold shock protein CspE [Escherichia coli MS 200-1]
gi|300314212|gb|EFJ63996.1| cold shock protein CspE [Escherichia coli MS 175-1]
gi|300355435|gb|EFJ71305.1| cold shock protein CspE [Escherichia coli MS 198-1]
gi|300396117|gb|EFJ79655.1| cold shock protein CspE [Escherichia coli MS 69-1]
gi|300400487|gb|EFJ84025.1| cold shock protein CspE [Escherichia coli MS 84-1]
gi|300407161|gb|EFJ90699.1| cold shock protein CspE [Escherichia coli MS 45-1]
gi|300412430|gb|EFJ95740.1| cold shock protein CspE [Escherichia coli MS 115-1]
gi|300416766|gb|EFK00077.1| cold shock protein CspE [Escherichia coli MS 182-1]
gi|300449605|gb|EFK13225.1| cold shock protein CspE [Escherichia coli MS 116-1]
gi|300455497|gb|EFK18990.1| cold shock protein CspE [Escherichia coli MS 21-1]
gi|300460695|gb|EFK24188.1| cold shock protein CspE [Escherichia coli MS 187-1]
gi|300524411|gb|EFK45480.1| cold shock protein CspE [Escherichia coli MS 119-7]
gi|300529556|gb|EFK50618.1| cold shock protein CspE [Escherichia coli MS 107-1]
gi|300842654|gb|EFK70414.1| cold shock protein CspE [Escherichia coli MS 124-1]
gi|300844528|gb|EFK72288.1| cold shock protein CspE [Escherichia coli MS 78-1]
gi|301077663|gb|EFK92469.1| cold shock protein CspE [Escherichia coli MS 146-1]
gi|305853707|gb|EFM54146.1| cold shock protein CspE [Escherichia coli NC101]
gi|306907362|gb|EFN37867.1| cold-shock DNA-binding domain protein [Escherichia coli W]
gi|307552494|gb|ADN45269.1| cold shock-like protein CspE [Escherichia coli ABU 83972]
gi|307627938|gb|ADN72242.1| cold shock protein CspE [Escherichia coli UM146]
gi|308120884|gb|EFO58146.1| cold shock protein CspE [Escherichia coli MS 145-7]
gi|308926056|gb|EFP71534.1| cold shock-like protein cspI [Shigella dysenteriae 1617]
gi|309700862|emb|CBJ00159.1| cold shock-like protein [Escherichia coli ETEC H10407]
gi|310337353|gb|EFQ02491.1| cold shock-like protein cspI [Escherichia coli 1827-70]
gi|312290161|gb|EFR18044.1| cold shock-like protein cspI [Escherichia coli 2362-75]
gi|312945171|gb|ADR25998.1| cold shock protein CspE [Escherichia coli O83:H1 str. NRG 857C]
gi|313649731|gb|EFS14155.1| cold shock-like protein cspI [Shigella flexneri 2a str. 2457T]
gi|315059879|gb|ADT74206.1| DNA-binding transcriptional repressor [Escherichia coli W]
gi|315135289|dbj|BAJ42448.1| cold shock protein CspE [Escherichia coli DH1]
gi|315255074|gb|EFU35042.1| cold shock protein CspE [Escherichia coli MS 85-1]
gi|315287050|gb|EFU46465.1| cold shock protein CspE [Escherichia coli MS 110-3]
gi|315292127|gb|EFU51479.1| cold shock protein CspE [Escherichia coli MS 153-1]
gi|315299117|gb|EFU58371.1| cold shock protein CspE [Escherichia coli MS 16-3]
gi|315616459|gb|EFU97076.1| cold shock-like protein cspI [Escherichia coli 3431]
gi|320175134|gb|EFW50246.1| Cold shock protein CspE [Shigella dysenteriae CDC 74-1112]
gi|320178413|gb|EFW53381.1| Cold shock protein CspE [Shigella boydii ATCC 9905]
gi|320185402|gb|EFW60172.1| Cold shock protein CspE [Shigella flexneri CDC 796-83]
gi|320193030|gb|EFW67670.1| Cold shock protein CspE [Escherichia coli O157:H7 str. EC1212]
gi|320194194|gb|EFW68826.1| Cold shock protein CspE [Escherichia coli WV_060327]
gi|320198250|gb|EFW72854.1| Cold shock protein CspE [Escherichia coli EC4100B]
gi|320638073|gb|EFX07837.1| cold shock protein CspE [Escherichia coli O157:H7 str. G5101]
gi|320643479|gb|EFX12649.1| cold shock protein CspE [Escherichia coli O157:H- str. 493-89]
gi|320648814|gb|EFX17441.1| cold shock protein CspE [Escherichia coli O157:H- str. H 2687]
gi|320654400|gb|EFX22447.1| cold shock protein CspE [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320660081|gb|EFX27611.1| cold shock protein CspE [Escherichia coli O55:H7 str. USDA 5905]
gi|320664878|gb|EFX32013.1| cold shock protein CspE [Escherichia coli O157:H7 str. LSU-61]
gi|323153655|gb|EFZ39903.1| cold shock-like protein cspI [Escherichia coli EPECa14]
gi|323158923|gb|EFZ44934.1| cold shock-like protein cspI [Escherichia coli E128010]
gi|323164078|gb|EFZ49886.1| cold shock-like protein cspI [Shigella sonnei 53G]
gi|323170751|gb|EFZ56401.1| cold shock-like protein cspI [Escherichia coli LT-68]
gi|323179900|gb|EFZ65457.1| cold shock-like protein cspI [Escherichia coli OK1180]
gi|323184883|gb|EFZ70251.1| cold shock-like protein cspI [Escherichia coli OK1357]
gi|323191262|gb|EFZ76526.1| cold shock-like protein cspI [Escherichia coli RN587/1]
gi|323379557|gb|ADX51825.1| cold-shock DNA-binding domain protein [Escherichia coli KO11FL]
gi|323938386|gb|EGB34640.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1520]
gi|323943038|gb|EGB39197.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E482]
gi|323945099|gb|EGB41161.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H120]
gi|323952798|gb|EGB48666.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H252]
gi|323958382|gb|EGB54088.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H263]
gi|323963193|gb|EGB58761.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
H489]
gi|323967571|gb|EGB62987.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
M863]
gi|323972078|gb|EGB67292.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
TA007]
gi|323976394|gb|EGB71484.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
TW10509]
gi|324006340|gb|EGB75559.1| cold shock protein CspE [Escherichia coli MS 57-2]
gi|324010499|gb|EGB79718.1| cold shock protein CspE [Escherichia coli MS 60-1]
gi|324016114|gb|EGB85333.1| cold shock protein CspE [Escherichia coli MS 117-3]
gi|324114747|gb|EGC08715.1| cold-shock DNA-binding domain-containing protein [Escherichia
fergusonii B253]
gi|324116698|gb|EGC10613.1| cold-shock DNA-binding domain-containing protein [Escherichia coli
E1167]
gi|325498195|gb|EGC96054.1| cold shock protein CspE [Escherichia fergusonii ECD227]
gi|326341375|gb|EGD65167.1| Cold shock protein CspE [Escherichia coli O157:H7 str. 1044]
gi|326345847|gb|EGD69586.1| Cold shock protein CspE [Escherichia coli O157:H7 str. 1125]
gi|327254308|gb|EGE65930.1| cold shock-like protein cspI [Escherichia coli STEC_7v]
gi|330910385|gb|EGH38895.1| cold shock protein CspE [Escherichia coli AA86]
gi|331054899|gb|EGI26908.1| cold shock protein [Escherichia coli TA206]
gi|331060410|gb|EGI32374.1| cold shock protein [Escherichia coli TA143]
gi|331066200|gb|EGI38084.1| cold shock protein [Escherichia coli TA271]
gi|331080724|gb|EGI51898.1| cold shock protein [Escherichia coli H299]
gi|332094296|gb|EGI99347.1| cold shock-like protein cspI [Shigella boydii 5216-82]
gi|332096862|gb|EGJ01852.1| cold shock-like protein cspI [Shigella dysenteriae 155-74]
gi|332341970|gb|AEE55304.1| cold shock-like protein CspI [Escherichia coli UMNK88]
gi|332761006|gb|EGJ91294.1| cold shock-like protein cspI [Shigella flexneri 4343-70]
gi|332761185|gb|EGJ91471.1| cold shock-like protein cspI [Shigella flexneri 2747-71]
gi|332763377|gb|EGJ93617.1| cold shock-like protein cspI [Shigella flexneri K-671]
gi|332768274|gb|EGJ98459.1| transcription antiterminator and regulator of RNA stability
[Shigella flexneri 2930-71]
gi|333007465|gb|EGK26945.1| cold shock-like protein cspI [Shigella flexneri VA-6]
gi|333008038|gb|EGK27514.1| cold shock-like protein cspI [Shigella flexneri K-218]
gi|333010035|gb|EGK29470.1| cold shock-like protein cspI [Shigella flexneri K-272]
gi|333020868|gb|EGK40128.1| cold shock-like protein cspI [Shigella flexneri K-227]
gi|333021570|gb|EGK40820.1| cold shock-like protein cspI [Shigella flexneri K-304]
gi|335576942|gb|EGM63180.1| transcription antiterminator and regulator of RNA stability
[Shigella flexneri J1713]
gi|338771286|gb|EGP26029.1| Cold shock-like protein CspE [Escherichia coli PCN033]
gi|339413585|gb|AEJ55257.1| cold shock-like protein cspI [Escherichia coli UMNF18]
gi|339511916|emb|CCC29631.1| cold shock-like protein cspE [Salmonella bongori NCTC 12419]
gi|340735861|gb|EGR64917.1| cold shock protein CspE [Escherichia coli O104:H4 str. 01-09591]
gi|340741666|gb|EGR75812.1| cold shock protein CspE [Escherichia coli O104:H4 str. LB226692]
gi|341917147|gb|EGT66763.1| hypothetical protein C22711_0791 [Escherichia coli O104:H4 str.
C227-11]
gi|342361836|gb|EGU25965.1| cold shock protein CspE [Escherichia coli XH140A]
gi|342928465|gb|EGU97187.1| putative cold shock protein [Escherichia coli MS 79-10]
gi|344192809|gb|EGV46896.1| cold shock protein CspE [Escherichia coli XH001]
gi|345340940|gb|EGW73356.1| cold shock-like protein cspI [Escherichia coli STEC_C165-02]
gi|345343525|gb|EGW75911.1| cold shock-like protein cspI [Escherichia coli STEC_B2F1]
gi|345344848|gb|EGW77207.1| cold shock-like protein cspI [Escherichia coli 2534-86]
gi|345353449|gb|EGW85682.1| cold shock-like protein cspI [Escherichia coli STEC_94C]
gi|345360078|gb|EGW92249.1| cold shock-like protein cspI [Escherichia coli 3030-1]
gi|345364721|gb|EGW96842.1| cold shock-like protein cspI [Escherichia coli STEC_DG131-3]
gi|345366129|gb|EGW98227.1| cold shock-like protein cspI [Escherichia coli STEC_EH250]
gi|345377858|gb|EGX09789.1| cold shock-like protein cspI [Escherichia coli STEC_MHI813]
gi|345380891|gb|EGX12783.1| cold shock-like protein cspI [Escherichia coli G58-1]
gi|345385648|gb|EGX15487.1| cold shock-like protein cspI [Escherichia coli STEC_H.1.8]
gi|345390762|gb|EGX20559.1| cold shock-like protein cspI [Escherichia coli STEC_S1191]
gi|345395240|gb|EGX24989.1| cold shock-like protein cspI [Escherichia coli TX1999]
gi|349736755|gb|AEQ11461.1| DNA-binding transcriptional repressor [Escherichia coli O7:K1 str.
CE10]
gi|354858428|gb|EHF18879.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
04-8351]
gi|354858536|gb|EHF18986.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
C227-11]
gi|354864330|gb|EHF24759.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
C236-11]
gi|354877333|gb|EHF37693.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
09-7901]
gi|354879128|gb|EHF39469.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-4404]
gi|354883541|gb|EHF43860.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-3677]
gi|354885526|gb|EHF45823.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-4522]
gi|354888212|gb|EHF48473.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-4623]
gi|354901697|gb|EHF61824.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354904513|gb|EHF64604.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354907170|gb|EHF67235.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354917980|gb|EHF77941.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C5]
gi|354921955|gb|EHF81874.1| cold shock-like protein CspE [Escherichia coli O104:H4 str. 11-4632
C4]
gi|355352966|gb|EHG02139.1| cold shock protein CspE [Escherichia coli cloneA_i1]
gi|355419074|gb|AER83271.1| cold shock protein CspE [Escherichia coli str. 'clone D i2']
gi|355423994|gb|AER88190.1| cold shock protein CspE [Escherichia coli str. 'clone D i14']
gi|359331340|dbj|BAL37787.1| DNA-binding transcriptional repressor [Escherichia coli str. K-12
substr. MDS42]
gi|363644101|gb|EHL83405.1| cold shock-like protein CspE [Citrobacter freundii 4_7_47CFAA]
gi|371593752|gb|EHN82628.1| cold shock-like protein CspE [Escherichia coli H494]
gi|371595018|gb|EHN83872.1| cold shock-like protein CspE [Escherichia coli TA124]
gi|371611137|gb|EHN99663.1| cold shock-like protein cspE [Escherichia coli H397]
gi|371613872|gb|EHO02360.1| cold shock-like protein cspE [Escherichia coli E101]
gi|371616254|gb|EHO04620.1| cold shock-like protein cspE [Escherichia coli B093]
gi|373248141|gb|EHP67573.1| cold shock-like protein CspE [Escherichia coli 4_1_47FAA]
gi|374357680|gb|AEZ39387.1| cold shock protein CspE [Escherichia coli O55:H7 str. RM12579]
gi|375320354|gb|EHS66325.1| cold shock protein CspE [Escherichia coli O157:H43 str. T22]
gi|375322418|gb|EHS68176.1| cold shock protein CspE [Escherichia coli O157:H43 str. T22]
gi|377848953|gb|EHU13929.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC1A]
gi|377851093|gb|EHU16048.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC1C]
gi|377853428|gb|EHU18327.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC1B]
gi|377862926|gb|EHU27733.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC1D]
gi|377867038|gb|EHU31802.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC1E]
gi|377868395|gb|EHU33139.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC2A]
gi|377879339|gb|EHU43912.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC2B]
gi|377883837|gb|EHU48355.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC2D]
gi|377885447|gb|EHU49942.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC2C]
gi|377898588|gb|EHU62948.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC2E]
gi|377900107|gb|EHU64445.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3A]
gi|377902054|gb|EHU66363.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3B]
gi|377913783|gb|EHU77915.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3C]
gi|377918009|gb|EHU82063.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3D]
gi|377920434|gb|EHU84455.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3E]
gi|377931709|gb|EHU95568.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC3F]
gi|377934062|gb|EHU97902.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4A]
gi|377939305|gb|EHV03061.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4B]
gi|377949515|gb|EHV13147.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4C]
gi|377951526|gb|EHV15145.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4D]
gi|377954182|gb|EHV17742.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4E]
gi|377965499|gb|EHV28918.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC5A]
gi|377967585|gb|EHV30991.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC4F]
gi|377972525|gb|EHV35874.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC5B]
gi|377980411|gb|EHV43676.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC5C]
gi|377980522|gb|EHV43786.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC5D]
gi|377987410|gb|EHV50596.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC5E]
gi|377999361|gb|EHV62444.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC6A]
gi|378001678|gb|EHV64737.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC6B]
gi|378003234|gb|EHV66279.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC6C]
gi|378013383|gb|EHV76301.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC6D]
gi|378016460|gb|EHV79341.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC6E]
gi|378018468|gb|EHV81325.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC7A]
gi|378028058|gb|EHV90683.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC7C]
gi|378032577|gb|EHV95158.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC7D]
gi|378037360|gb|EHV99888.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC7B]
gi|378042509|gb|EHW04958.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC7E]
gi|378052369|gb|EHW14677.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC8A]
gi|378056651|gb|EHW18891.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC8B]
gi|378062203|gb|EHW24381.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC8C]
gi|378068160|gb|EHW30264.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC8D]
gi|378072939|gb|EHW34996.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC8E]
gi|378080937|gb|EHW42893.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9A]
gi|378082083|gb|EHW44029.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9B]
gi|378089738|gb|EHW51579.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9C]
gi|378094355|gb|EHW56153.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9D]
gi|378101431|gb|EHW63117.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC9E]
gi|378106968|gb|EHW68594.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10A]
gi|378115668|gb|EHW77203.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10B]
gi|378118422|gb|EHW79925.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10C]
gi|378121330|gb|EHW82784.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10D]
gi|378133127|gb|EHW94474.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10E]
gi|378136055|gb|EHW97355.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC11A]
gi|378138904|gb|EHX00154.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC10F]
gi|378146322|gb|EHX07474.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC11B]
gi|378152620|gb|EHX13713.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC11D]
gi|378156424|gb|EHX17474.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC11C]
gi|378160857|gb|EHX21843.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC11E]
gi|378174221|gb|EHX35048.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC12B]
gi|378174703|gb|EHX35526.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC12A]
gi|378176141|gb|EHX36948.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC12C]
gi|378189819|gb|EHX50408.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13A]
gi|378190198|gb|EHX50783.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC12D]
gi|378193597|gb|EHX54129.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC12E]
gi|378204354|gb|EHX64770.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13B]
gi|378208501|gb|EHX68885.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13D]
gi|378208756|gb|EHX69136.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13C]
gi|378219624|gb|EHX79891.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC13E]
gi|378222100|gb|EHX82342.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli DEC14A]
gi|378225471|gb|EHX85669.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC14B]
gi|378233327|gb|EHX93416.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC14C]
gi|378236641|gb|EHX96681.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC14D]
gi|378244826|gb|EHY04768.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15A]
gi|378250677|gb|EHY10580.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15B]
gi|378251608|gb|EHY11505.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15C]
gi|378257453|gb|EHY17292.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15D]
gi|378261136|gb|EHY20932.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli DEC15E]
gi|380349522|gb|EIA37794.1| cold shock protein CspE [Escherichia coli SCI-07]
gi|383394116|gb|AFH19074.1| cold shock protein CspE [Escherichia coli KO11FL]
gi|383404099|gb|AFH10342.1| cold shock protein CspE [Escherichia coli W]
gi|383474379|gb|EID66368.1| cold shock protein CspE [Escherichia coli W26]
gi|384378113|gb|EIE36002.1| cold shock protein CspE [Escherichia coli J53]
gi|384472008|gb|EIE56072.1| cold shock protein CspE [Escherichia coli AI27]
gi|385154671|gb|EIF16681.1| cold shock protein CspE [Escherichia coli O32:H37 str. P4]
gi|385540081|gb|EIF86908.1| cold shock-like protein CspE [Escherichia coli M919]
gi|385707899|gb|EIG44924.1| cold shock-like protein CspE [Escherichia coli B799]
gi|385712730|gb|EIG49672.1| cold shock-like protein CspE [Escherichia coli H730]
gi|386123200|gb|EIG71799.1| cold shock-like protein CspE [Escherichia sp. 4_1_40B]
gi|386138103|gb|EIG79263.1| cold shock-like protein CspE [Escherichia coli 1.2741]
gi|386143748|gb|EIG90224.1| cold shock-like protein CspE [Escherichia coli 97.0246]
gi|386153258|gb|EIH04547.1| cold shock-like protein CspE [Escherichia coli 5.0588]
gi|386156992|gb|EIH13334.1| cold shock-like protein CspE [Escherichia coli 97.0259]
gi|386164647|gb|EIH26433.1| cold shock-like protein CspE [Escherichia coli 1.2264]
gi|386169966|gb|EIH36474.1| cold shock-like protein CspE [Escherichia coli 96.0497]
gi|386171278|gb|EIH43323.1| cold shock-like protein CspE [Escherichia coli 99.0741]
gi|386178347|gb|EIH55826.1| cold shock-like protein CspE [Escherichia coli 3.2608]
gi|386186088|gb|EIH68805.1| cold shock-like protein CspE [Escherichia coli 93.0624]
gi|386190259|gb|EIH79007.1| cold shock-like protein CspE [Escherichia coli 4.0522]
gi|386196461|gb|EIH90683.1| cold shock-like protein CspE [Escherichia coli JB1-95]
gi|386200087|gb|EIH99078.1| cold shock-like protein CspE [Escherichia coli 96.154]
gi|386206237|gb|EII10743.1| cold shock-like protein CspE [Escherichia coli 5.0959]
gi|386209515|gb|EII20002.1| cold shock-like protein CspE [Escherichia coli 9.0111]
gi|386216530|gb|EII33019.1| cold shock-like protein CspE [Escherichia coli 4.0967]
gi|386222614|gb|EII45033.1| cold shock-like protein CspE [Escherichia coli 2.3916]
gi|386230408|gb|EII57763.1| cold shock-like protein CspE [Escherichia coli 3.3884]
gi|386233401|gb|EII65386.1| cold shock-like protein CspE [Escherichia coli 2.4168]
gi|386242195|gb|EII79108.1| cold shock-like protein CspE [Escherichia coli 3.2303]
gi|386242587|gb|EII84322.1| cold shock-like protein CspE [Escherichia coli 3003]
gi|386247858|gb|EII94031.1| cold shock-like protein CspE [Escherichia coli TW07793]
gi|386255559|gb|EIJ05247.1| cold shock-like protein CspE [Escherichia coli B41]
gi|386262149|gb|EIJ17596.1| cold shock-like protein CspE [Escherichia coli 900105 (10e)]
gi|386794661|gb|AFJ27695.1| cold shock protein CspE [Escherichia coli Xuzhou21]
gi|388342351|gb|EIL08386.1| cold shock protein CspE [Escherichia coli O103:H25 str. CVM9340]
gi|388343907|gb|EIL09806.1| cold shock protein CspE [Escherichia coli O103:H2 str. CVM9450]
gi|388347024|gb|EIL12722.1| cold shock protein CspE [Escherichia coli O111:H11 str. CVM9534]
gi|388357726|gb|EIL22256.1| cold shock protein CspE [Escherichia coli O111:H8 str. CVM9570]
gi|388359947|gb|EIL24201.1| cold shock protein CspE [Escherichia coli O111:H8 str. CVM9574]
gi|388378297|gb|EIL41054.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM9942]
gi|388379622|gb|EIL42270.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM10026]
gi|388384112|gb|EIL45854.1| cold shock protein CspE [Escherichia coli KD1]
gi|388390133|gb|EIL51631.1| cold shock protein CspE [Escherichia coli 541-15]
gi|388394714|gb|EIL55971.1| cold shock protein CspE [Escherichia coli KD2]
gi|388401176|gb|EIL61838.1| cold shock protein CspE [Escherichia coli 576-1]
gi|388401217|gb|EIL61876.1| cold shock protein CspE [Escherichia coli 75]
gi|388404383|gb|EIL64846.1| cold shock protein CspE [Escherichia coli 541-1]
gi|388415829|gb|EIL75740.1| cold shock protein CspE [Escherichia coli HM605]
gi|388420823|gb|EIL80490.1| cold shock protein CspE [Escherichia coli CUMT8]
gi|390650680|gb|EIN29080.1| cold shock-like protein CspE [Escherichia coli FRIK1996]
gi|390652611|gb|EIN30813.1| cold shock-like protein CspE [Escherichia coli FDA517]
gi|390653076|gb|EIN31242.1| cold shock-like protein CspE [Escherichia coli FDA505]
gi|390669607|gb|EIN46227.1| cold shock-like protein CspE [Escherichia coli 93-001]
gi|390672690|gb|EIN48967.1| cold shock-like protein CspE [Escherichia coli FRIK1990]
gi|390673489|gb|EIN49731.1| cold shock-like protein CspE [Escherichia coli FRIK1985]
gi|390688495|gb|EIN63553.1| cold shock-like protein CspE [Escherichia coli PA3]
gi|390691904|gb|EIN66626.1| cold shock-like protein CspE [Escherichia coli PA9]
gi|390692813|gb|EIN67474.1| cold shock-like protein CspE [Escherichia coli PA5]
gi|390708224|gb|EIN81488.1| cold shock-like protein CspE [Escherichia coli PA10]
gi|390709958|gb|EIN82997.1| cold shock-like protein CspE [Escherichia coli PA15]
gi|390711842|gb|EIN84801.1| cold shock-like protein CspE [Escherichia coli PA14]
gi|390720170|gb|EIN92882.1| cold shock-like protein CspE [Escherichia coli PA22]
gi|390733252|gb|EIO04836.1| cold shock-like protein CspE [Escherichia coli PA25]
gi|390733378|gb|EIO04958.1| cold shock-like protein CspE [Escherichia coli PA24]
gi|390736421|gb|EIO07755.1| cold shock-like protein CspE [Escherichia coli PA28]
gi|390751790|gb|EIO21663.1| cold shock-like protein CspE [Escherichia coli PA31]
gi|390752200|gb|EIO22049.1| cold shock-like protein CspE [Escherichia coli PA32]
gi|390754669|gb|EIO24236.1| cold shock-like protein CspE [Escherichia coli PA33]
gi|390762601|gb|EIO31859.1| cold shock-like protein CspE [Escherichia coli PA40]
gi|390775967|gb|EIO43946.1| cold shock-like protein CspE [Escherichia coli PA41]
gi|390777747|gb|EIO45525.1| cold shock-like protein CspE [Escherichia coli PA42]
gi|390783397|gb|EIO51003.1| cold shock-like protein CspE [Escherichia coli PA39]
gi|390785544|gb|EIO53086.1| cold shock-like protein CspE [Escherichia coli TW06591]
gi|390792092|gb|EIO59455.1| cold shock-like protein CspE [Escherichia coli TW10246]
gi|390801990|gb|EIO69041.1| cold shock-like protein CspE [Escherichia coli TW11039]
gi|390809359|gb|EIO76153.1| cold shock-like protein CspE [Escherichia coli TW07945]
gi|390811568|gb|EIO78268.1| cold shock-like protein CspE [Escherichia coli TW09109]
gi|390819237|gb|EIO85586.1| cold shock-like protein CspE [Escherichia coli TW10119]
gi|390822784|gb|EIO88880.1| cold shock-like protein CspE [Escherichia coli TW09098]
gi|390836937|gb|EIP01402.1| cold shock-like protein CspE [Escherichia coli EC4203]
gi|390839909|gb|EIP03988.1| cold shock-like protein CspE [Escherichia coli EC4196]
gi|390841386|gb|EIP05318.1| cold shock-like protein CspE [Escherichia coli TW09195]
gi|390855387|gb|EIP18107.1| cold shock-like protein CspE [Escherichia coli TW14301]
gi|390859365|gb|EIP21716.1| cold shock-like protein CspE [Escherichia coli EC4421]
gi|390859616|gb|EIP21960.1| cold shock-like protein CspE [Escherichia coli TW14313]
gi|390871430|gb|EIP32841.1| cold shock-like protein CspE [Escherichia coli EC4422]
gi|390875947|gb|EIP36945.1| cold shock-like protein CspE [Escherichia coli EC4013]
gi|390885935|gb|EIP46107.1| cold shock-like protein CspE [Escherichia coli EC4402]
gi|390887919|gb|EIP47840.1| cold shock-like protein CspE [Escherichia coli EC4439]
gi|390894361|gb|EIP53879.1| cold shock-like protein CspE [Escherichia coli EC4436]
gi|390897233|gb|EIP56573.1| cold shock-like protein CspE [Escherichia coli EC1738]
gi|390909652|gb|EIP68426.1| cold shock-like protein CspE [Escherichia coli EC1734]
gi|390910176|gb|EIP68930.1| cold shock-like protein CspE [Escherichia coli EC4437]
gi|390914973|gb|EIP73503.1| cold shock-like protein CspE [Escherichia coli EC4448]
gi|390924728|gb|EIP82476.1| cold shock-like protein CspE [Escherichia coli EC1863]
gi|390926035|gb|EIP83639.1| cold shock-like protein CspE [Escherichia coli EC1845]
gi|391254347|gb|EIQ13509.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri 2850-71]
gi|391256485|gb|EIQ15616.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri CCH060]
gi|391258832|gb|EIQ17919.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri K-1770]
gi|391267591|gb|EIQ26524.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri K-315]
gi|391273531|gb|EIQ32356.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri K-404]
gi|391275928|gb|EIQ34711.1| RNA chaperone, negative regulator of cspA transcription [Shigella
boydii 965-58]
gi|391288373|gb|EIQ46878.1| RNA chaperone, negative regulator of cspA transcription [Shigella
sonnei 3226-85]
gi|391288486|gb|EIQ46990.1| RNA chaperone, negative regulator of cspA transcription [Shigella
boydii 4444-74]
gi|391289456|gb|EIQ47951.1| RNA chaperone, negative regulator of cspA transcription [Shigella
sonnei 3233-85]
gi|391296341|gb|EIQ54435.1| transcription antiterminator and regulator of RNA stability
[Shigella sonnei 4822-66]
gi|391306280|gb|EIQ64040.1| RNA chaperone, negative regulator of cspA transcription [Shigella
dysenteriae 225-75]
gi|391309348|gb|EIQ67021.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli EPECa12]
gi|391314769|gb|EIQ72312.1| transcription antiterminator and regulator of RNA stability
[Escherichia coli EPEC C342-62]
gi|391319995|gb|EIQ76921.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri 1235-66]
gi|391323654|gb|EIQ80285.1| RNA chaperone, negative regulator of cspA transcription [Shigella
flexneri 1235-66]
gi|394391914|gb|EJE68739.1| cold shock protein CspE [Escherichia coli O111:H8 str. CVM9602]
gi|394394281|gb|EJE70890.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM10224]
gi|394399580|gb|EJE75586.1| cold shock protein CspE [Escherichia coli O111:H8 str. CVM9634]
gi|394405443|gb|EJE80624.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM10021]
gi|394408479|gb|EJE83122.1| cold shock protein CspE [Escherichia coli O111:H11 str. CVM9553]
gi|394422080|gb|EJE95485.1| cold shock protein CspE [Escherichia coli O111:H11 str. CVM9455]
gi|394431658|gb|EJF03830.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM10030]
gi|394433597|gb|EJF05606.1| cold shock protein CspE [Escherichia coli O26:H11 str. CVM9952]
gi|394718671|gb|EJF24292.1| cold shock protein [Citrobacter sp. A1]
gi|397786670|gb|EJK97503.1| cold shock-like protein cspI [Escherichia coli STEC_O31]
gi|397900825|gb|EJL17181.1| transcription antiterminator and regulator of RNA stability
[Shigella flexneri 6603-63]
gi|397903190|gb|EJL19497.1| transcription antiterminator and regulator of RNA stability
[Shigella sonnei str. Moseley]
gi|404292560|gb|EJZ49378.1| cold shock-like protein CspE [Escherichia sp. 1_1_43]
gi|404341725|gb|EJZ68129.1| transcription antiterminator and regulator of RNA stability
[Shigella flexneri 1485-80]
gi|406778933|gb|AFS58357.1| cold shock protein CspE [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407055515|gb|AFS75566.1| cold shock protein CspE [Escherichia coli O104:H4 str. 2011C-3493]
gi|407064086|gb|AFS85133.1| cold shock protein CspE [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408072065|gb|EKH06390.1| cold shock-like protein CspE [Escherichia coli PA7]
gi|408075510|gb|EKH09742.1| cold shock-like protein CspE [Escherichia coli FRIK920]
gi|408085869|gb|EKH19439.1| cold shock-like protein CspE [Escherichia coli PA34]
gi|408089943|gb|EKH23235.1| cold shock-like protein CspE [Escherichia coli FDA506]
gi|408095366|gb|EKH28350.1| cold shock-like protein CspE [Escherichia coli FDA507]
gi|408102211|gb|EKH34627.1| cold shock-like protein CspE [Escherichia coli FDA504]
gi|408109881|gb|EKH41739.1| cold shock-like protein CspE [Escherichia coli FRIK1999]
gi|408116480|gb|EKH47777.1| cold shock-like protein CspE [Escherichia coli FRIK1997]
gi|408121874|gb|EKH52767.1| cold shock-like protein CspE [Escherichia coli NE1487]
gi|408130147|gb|EKH60317.1| cold shock-like protein CspE [Escherichia coli NE037]
gi|408132175|gb|EKH62171.1| cold shock-like protein CspE [Escherichia coli FRIK2001]
gi|408150170|gb|EKH78778.1| cold shock-like protein CspE [Escherichia coli PA23]
gi|408152606|gb|EKH81034.1| cold shock-like protein CspE [Escherichia coli PA49]
gi|408157651|gb|EKH85794.1| cold shock-like protein CspE [Escherichia coli PA45]
gi|408166666|gb|EKH94217.1| cold shock-like protein CspE [Escherichia coli TT12B]
gi|408171955|gb|EKH99043.1| cold shock-like protein CspE [Escherichia coli MA6]
gi|408174475|gb|EKI01459.1| cold shock-like protein CspE [Escherichia coli 5905]
gi|408186848|gb|EKI12859.1| cold shock-like protein CspE [Escherichia coli CB7326]
gi|408191608|gb|EKI17208.1| cold shock-like protein CspE [Escherichia coli EC96038]
gi|408191829|gb|EKI17425.1| cold shock-like protein CspE [Escherichia coli 5412]
gi|408198366|gb|EKI23596.1| cold shock-like protein CspE [Escherichia coli TW15901]
gi|408205749|gb|EKI30584.1| cold shock-like protein CspE [Escherichia coli TW00353]
gi|408206940|gb|EKI31705.1| cold shock-like protein CspE [Escherichia coli ARS4.2123]
gi|408218658|gb|EKI42860.1| cold shock-like protein CspE [Escherichia coli 3006]
gi|408221797|gb|EKI45730.1| cold shock-like protein CspE [Escherichia coli 07798]
gi|408231665|gb|EKI54929.1| cold shock-like protein CspE [Escherichia coli N1]
gi|408232662|gb|EKI55831.1| cold shock-like protein CspE [Escherichia coli PA38]
gi|408238864|gb|EKI61645.1| cold shock-like protein CspE [Escherichia coli EC1735]
gi|408248868|gb|EKI70850.1| cold shock-like protein CspE [Escherichia coli EC1736]
gi|408252712|gb|EKI74342.1| cold shock-like protein CspE [Escherichia coli EC1737]
gi|408259071|gb|EKI80273.1| cold shock-like protein CspE [Escherichia coli EC1846]
gi|408268247|gb|EKI88641.1| cold shock-like protein CspE [Escherichia coli EC1847]
gi|408269864|gb|EKI90098.1| cold shock-like protein CspE [Escherichia coli EC1848]
gi|408278776|gb|EKI98466.1| cold shock-like protein CspE [Escherichia coli EC1849]
gi|408285044|gb|EKJ04096.1| cold shock-like protein CspE [Escherichia coli EC1850]
gi|408287521|gb|EKJ06386.1| cold shock-like protein CspE [Escherichia coli EC1856]
gi|408300310|gb|EKJ18013.1| cold shock-like protein CspE [Escherichia coli EC1862]
gi|408300758|gb|EKJ18442.1| cold shock-like protein CspE [Escherichia coli EC1864]
gi|408309623|gb|EKJ26774.1| cold shock-like protein CspE [Escherichia coli EC1865]
gi|408317285|gb|EKJ33523.1| cold shock-like protein CspE [Escherichia coli EC1868]
gi|408317537|gb|EKJ33769.1| cold shock-like protein CspE [Escherichia coli EC1866]
gi|408331265|gb|EKJ46456.1| cold shock-like protein CspE [Escherichia coli EC1869]
gi|408336520|gb|EKJ51277.1| cold shock-like protein CspE [Escherichia coli NE098]
gi|408337997|gb|EKJ52671.1| cold shock-like protein CspE [Escherichia coli EC1870]
gi|408347472|gb|EKJ61678.1| cold shock-like protein CspE [Escherichia coli 0.1288]
gi|408350394|gb|EKJ64268.1| cold shock-like protein CspE [Escherichia coli FRIK523]
gi|408353000|gb|EKJ66526.1| cold shock-like protein CspE [Escherichia coli 0.1304]
gi|408457917|gb|EKJ81708.1| cold shock protein CspE [Escherichia coli AD30]
gi|408558364|gb|EKK34735.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 5.2239]
gi|408558888|gb|EKK35238.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 3.4870]
gi|408559946|gb|EKK36236.1| cold shock protein CspE [Escherichia coli 6.0172]
gi|408572764|gb|EKK48649.1| cold shock protein CspE [Escherichia coli 8.0566]
gi|408573323|gb|EKK49179.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 8.0569]
gi|408585120|gb|EKK60022.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 8.0586]
gi|408590078|gb|EKK64576.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 8.2524]
gi|408591814|gb|EKK66232.1| cold shock protein CspE [Escherichia coli 10.0833]
gi|408604007|gb|EKK77609.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 10.0869]
gi|408605457|gb|EKK78964.1| cold shock protein CspE [Escherichia coli 8.0416]
gi|408616905|gb|EKK90044.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 10.0821]
gi|411775203|gb|EKS58649.1| cold shock protein CspE [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|412961878|emb|CCK45789.1| cold shock protein [Escherichia coli chi7122]
gi|412968466|emb|CCJ43089.1| cold shock protein [Escherichia coli]
gi|421940950|gb|EKT98377.1| cold shock protein CspE [Escherichia coli O26:H11 str. CFSAN001629]
gi|421943730|gb|EKU01007.1| cold shock protein CspE [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421946567|gb|EKU03691.1| cold shock protein CspE [Escherichia coli O111:H8 str. CFSAN001632]
gi|422896824|gb|EKU36606.1| cold shock protein [Citrobacter sp. L17]
gi|427214319|gb|EKV83648.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 88.1042]
gi|427216379|gb|EKV85500.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 89.0511]
gi|427216746|gb|EKV85843.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 88.1467]
gi|427233648|gb|EKW01377.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 90.2281]
gi|427235941|gb|EKW03544.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 90.0091]
gi|427252860|gb|EKW19330.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 93.0055]
gi|427270133|gb|EKW35030.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 95.0943]
gi|427270369|gb|EKW35248.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 95.0183]
gi|427275522|gb|EKW40135.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 95.1288]
gi|427286170|gb|EKW50036.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0428]
gi|427291829|gb|EKW55206.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0427]
gi|427304561|gb|EKW67199.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 97.0003]
gi|427306125|gb|EKW68671.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0932]
gi|427321200|gb|EKW82901.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 97.1742]
gi|427333871|gb|EKW94958.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0713]
gi|427334039|gb|EKW95120.1| cold shock protein CspE [Escherichia coli 99.0678]
gi|427336653|gb|EKW97610.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0672]
gi|429259896|gb|EKY43529.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 96.0109]
gi|429261714|gb|EKY45118.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 97.0010]
gi|429351712|gb|EKY88432.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02030]
gi|429351845|gb|EKY88564.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02033-1]
gi|429353173|gb|EKY89882.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02092]
gi|429367086|gb|EKZ03687.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02093]
gi|429367997|gb|EKZ04589.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02281]
gi|429370492|gb|EKZ07058.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02318]
gi|429382879|gb|EKZ19343.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-02913]
gi|429385112|gb|EKZ21566.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-03943]
gi|429385635|gb|EKZ22088.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-03439]
gi|429397328|gb|EKZ33675.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
11-04080]
gi|429398691|gb|EKZ35024.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429398774|gb|EKZ35106.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429409608|gb|EKZ45835.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429411704|gb|EKZ47910.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429418442|gb|EKZ54586.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429428062|gb|EKZ64142.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429429583|gb|EKZ65651.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429435730|gb|EKZ71748.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429439400|gb|EKZ75383.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429444871|gb|EKZ80816.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429450450|gb|EKZ86345.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429456665|gb|EKZ92510.1| cold shock-like protein CspE [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430878737|gb|ELC02123.1| cold shock-like protein CspE [Escherichia coli KTE2]
gi|430879747|gb|ELC03078.1| cold shock-like protein CspE [Escherichia coli KTE4]
gi|430889043|gb|ELC11714.1| cold shock-like protein CspE [Escherichia coli KTE10]
gi|430889927|gb|ELC12574.1| cold shock-like protein CspE [Escherichia coli KTE5]
gi|430899969|gb|ELC22047.1| cold shock-like protein CspE [Escherichia coli KTE11]
gi|430901117|gb|ELC23100.1| cold shock-like protein CspE [Escherichia coli KTE12]
gi|430909552|gb|ELC30918.1| cold shock-like protein CspE [Escherichia coli KTE16]
gi|430911535|gb|ELC32818.1| cold shock-like protein CspE [Escherichia coli KTE15]
gi|430917664|gb|ELC38704.1| cold shock-like protein CspE [Escherichia coli KTE25]
gi|430922239|gb|ELC42999.1| cold shock-like protein CspE [Escherichia coli KTE21]
gi|430928544|gb|ELC49092.1| cold shock-like protein CspE [Escherichia coli KTE26]
gi|430932376|gb|ELC52799.1| cold shock-like protein CspE [Escherichia coli KTE28]
gi|430938588|gb|ELC58829.1| cold shock-like protein CspE [Escherichia coli KTE39]
gi|430943928|gb|ELC64034.1| cold shock-like protein CspE [Escherichia coli KTE44]
gi|430947184|gb|ELC66891.1| cold shock-like protein CspE [Escherichia coli KTE178]
gi|430956322|gb|ELC74998.1| cold shock-like protein CspE [Escherichia coli KTE187]
gi|430958739|gb|ELC77316.1| cold shock-like protein CspE [Escherichia coli KTE181]
gi|430966807|gb|ELC84170.1| cold shock-like protein CspE [Escherichia coli KTE188]
gi|430969202|gb|ELC86352.1| cold shock-like protein CspE [Escherichia coli KTE189]
gi|430974025|gb|ELC90963.1| cold shock-like protein CspE [Escherichia coli KTE193]
gi|430975805|gb|ELC92689.1| cold shock-like protein CspE [Escherichia coli KTE191]
gi|430985385|gb|ELD01991.1| cold shock-like protein CspE [Escherichia coli KTE201]
gi|430991604|gb|ELD08007.1| cold shock-like protein CspE [Escherichia coli KTE204]
gi|430997363|gb|ELD13630.1| cold shock-like protein CspE [Escherichia coli KTE205]
gi|431000088|gb|ELD16162.1| cold shock-like protein CspE [Escherichia coli KTE206]
gi|431009095|gb|ELD23719.1| cold shock-like protein CspE [Escherichia coli KTE208]
gi|431009865|gb|ELD24469.1| cold shock-like protein CspE [Escherichia coli KTE210]
gi|431018132|gb|ELD31569.1| cold shock-like protein CspE [Escherichia coli KTE212]
gi|431024012|gb|ELD37205.1| cold shock-like protein CspE [Escherichia coli KTE213]
gi|431027969|gb|ELD41014.1| cold shock-like protein CspE [Escherichia coli KTE214]
gi|431031996|gb|ELD44720.1| cold shock-like protein CspE [Escherichia coli KTE216]
gi|431042294|gb|ELD52786.1| cold shock-like protein CspE [Escherichia coli KTE220]
gi|431044405|gb|ELD54678.1| cold shock-like protein CspE [Escherichia coli KTE224]
gi|431044834|gb|ELD55091.1| cold shock-like protein CspE [Escherichia coli KTE228]
gi|431054857|gb|ELD64426.1| cold shock-like protein CspE [Escherichia coli KTE230]
gi|431057038|gb|ELD66516.1| cold shock-like protein CspE [Escherichia coli KTE233]
gi|431063724|gb|ELD72941.1| cold shock-like protein CspE [Escherichia coli KTE234]
gi|431072956|gb|ELD80693.1| cold shock-like protein CspE [Escherichia coli KTE235]
gi|431077254|gb|ELD84515.1| cold shock-like protein CspE [Escherichia coli KTE236]
gi|431084838|gb|ELD90962.1| cold shock-like protein CspE [Escherichia coli KTE237]
gi|431086884|gb|ELD92900.1| cold shock-like protein CspE [Escherichia coli KTE47]
gi|431094053|gb|ELD99703.1| cold shock-like protein CspE [Escherichia coli KTE49]
gi|431099739|gb|ELE04759.1| cold shock-like protein CspE [Escherichia coli KTE51]
gi|431103256|gb|ELE07926.1| cold shock-like protein CspE [Escherichia coli KTE53]
gi|431108987|gb|ELE12958.1| cold shock-like protein CspE [Escherichia coli KTE56]
gi|431110924|gb|ELE14841.1| cold shock-like protein CspE [Escherichia coli KTE55]
gi|431119726|gb|ELE22725.1| cold shock-like protein CspE [Escherichia coli KTE57]
gi|431124170|gb|ELE26824.1| cold shock-like protein CspE [Escherichia coli KTE58]
gi|431133146|gb|ELE35144.1| cold shock-like protein CspE [Escherichia coli KTE60]
gi|431133436|gb|ELE35426.1| cold shock-like protein CspE [Escherichia coli KTE62]
gi|431140690|gb|ELE42456.1| cold shock-like protein CspE [Escherichia coli KTE67]
gi|431143568|gb|ELE45291.1| cold shock-like protein CspE [Escherichia coli KTE66]
gi|431151141|gb|ELE52176.1| cold shock-like protein CspE [Escherichia coli KTE72]
gi|431157316|gb|ELE57960.1| cold shock-like protein CspE [Escherichia coli KTE75]
gi|431162404|gb|ELE62853.1| cold shock-like protein CspE [Escherichia coli KTE76]
gi|431165313|gb|ELE65671.1| cold shock-like protein CspE [Escherichia coli KTE77]
gi|431173838|gb|ELE73908.1| cold shock-like protein CspE [Escherichia coli KTE80]
gi|431174190|gb|ELE74251.1| cold shock-like protein CspE [Escherichia coli KTE81]
gi|431183859|gb|ELE83632.1| cold shock-like protein CspE [Escherichia coli KTE86]
gi|431184754|gb|ELE84500.1| cold shock-like protein CspE [Escherichia coli KTE83]
gi|431193483|gb|ELE92819.1| cold shock-like protein CspE [Escherichia coli KTE87]
gi|431194273|gb|ELE93538.1| cold shock-like protein CspE [Escherichia coli KTE93]
gi|431203224|gb|ELF01900.1| cold shock-like protein CspE [Escherichia coli KTE111]
gi|431203886|gb|ELF02475.1| cold shock-like protein CspE [Escherichia coli KTE116]
gi|431213272|gb|ELF11148.1| cold shock-like protein CspE [Escherichia coli KTE119]
gi|431217932|gb|ELF15418.1| cold shock-like protein CspE [Escherichia coli KTE142]
gi|431224593|gb|ELF21809.1| cold shock-like protein CspE [Escherichia coli KTE143]
gi|431224854|gb|ELF22064.1| cold shock-like protein CspE [Escherichia coli KTE156]
gi|431231012|gb|ELF26782.1| cold shock-like protein CspE [Escherichia coli KTE161]
gi|431236625|gb|ELF31830.1| cold shock-like protein CspE [Escherichia coli KTE162]
gi|431246668|gb|ELF40926.1| cold shock-like protein CspE [Escherichia coli KTE169]
gi|431246829|gb|ELF41077.1| cold shock-like protein CspE [Escherichia coli KTE171]
gi|431251603|gb|ELF45610.1| cold shock-like protein CspE [Escherichia coli KTE6]
gi|431259824|gb|ELF52187.1| cold shock-like protein CspE [Escherichia coli KTE8]
gi|431266684|gb|ELF58224.1| cold shock-like protein CspE [Escherichia coli KTE9]
gi|431268180|gb|ELF59661.1| cold shock-like protein CspE [Escherichia coli KTE17]
gi|431275409|gb|ELF66438.1| cold shock-like protein CspE [Escherichia coli KTE18]
gi|431278223|gb|ELF69217.1| cold shock-like protein CspE [Escherichia coli KTE45]
gi|431286515|gb|ELF77341.1| cold shock-like protein CspE [Escherichia coli KTE23]
gi|431286732|gb|ELF77556.1| cold shock-like protein CspE [Escherichia coli KTE42]
gi|431295051|gb|ELF85222.1| cold shock-like protein CspE [Escherichia coli KTE43]
gi|431300087|gb|ELF89650.1| cold shock-like protein CspE [Escherichia coli KTE29]
gi|431305769|gb|ELF94090.1| cold shock-like protein CspE [Escherichia coli KTE22]
gi|431311603|gb|ELF99761.1| cold shock-like protein CspE [Escherichia coli KTE46]
gi|431313070|gb|ELG01049.1| cold shock-like protein CspE [Escherichia coli KTE48]
gi|431318161|gb|ELG05928.1| cold shock-like protein CspE [Escherichia coli KTE50]
gi|431320360|gb|ELG08002.1| cold shock-like protein CspE [Escherichia coli KTE54]
gi|431330129|gb|ELG17411.1| cold shock-like protein CspE [Escherichia coli KTE59]
gi|431332203|gb|ELG19446.1| cold shock-like protein CspE [Escherichia coli KTE63]
gi|431341447|gb|ELG28454.1| cold shock-like protein CspE [Escherichia coli KTE65]
gi|431342185|gb|ELG29175.1| cold shock-like protein CspE [Escherichia coli KTE78]
gi|431345294|gb|ELG32216.1| cold shock-like protein CspE [Escherichia coli KTE79]
gi|431351064|gb|ELG37862.1| cold shock-like protein CspE [Escherichia coli KTE84]
gi|431357068|gb|ELG43742.1| cold shock-like protein CspE [Escherichia coli KTE101]
gi|431357176|gb|ELG43849.1| cold shock-like protein CspE [Escherichia coli KTE91]
gi|431367676|gb|ELG54151.1| cold shock-like protein CspE [Escherichia coli KTE115]
gi|431370912|gb|ELG56705.1| cold shock-like protein CspE [Escherichia coli KTE118]
gi|431374320|gb|ELG59912.1| cold shock-like protein CspE [Escherichia coli KTE123]
gi|431379839|gb|ELG64749.1| cold shock-like protein CspE [Escherichia coli KTE135]
gi|431388155|gb|ELG71893.1| cold shock-like protein CspE [Escherichia coli KTE136]
gi|431391451|gb|ELG75091.1| cold shock-like protein CspE [Escherichia coli KTE140]
gi|431397399|gb|ELG80855.1| cold shock-like protein CspE [Escherichia coli KTE141]
gi|431401690|gb|ELG85024.1| cold shock-like protein CspE [Escherichia coli KTE144]
gi|431405360|gb|ELG88603.1| cold shock-like protein CspE [Escherichia coli KTE147]
gi|431407999|gb|ELG91196.1| cold shock-like protein CspE [Escherichia coli KTE146]
gi|431413717|gb|ELG96482.1| cold shock-like protein CspE [Escherichia coli KTE154]
gi|431419384|gb|ELH01734.1| cold shock-like protein CspE [Escherichia coli KTE158]
gi|431424348|gb|ELH06444.1| cold shock-like protein CspE [Escherichia coli KTE165]
gi|431429508|gb|ELH11436.1| cold shock-like protein CspE [Escherichia coli KTE192]
gi|431436514|gb|ELH18029.1| cold shock-like protein CspE [Escherichia coli KTE194]
gi|431444259|gb|ELH25282.1| cold shock-like protein CspE [Escherichia coli KTE190]
gi|431446654|gb|ELH27398.1| cold shock-like protein CspE [Escherichia coli KTE173]
gi|431448558|gb|ELH29273.1| cold shock-like protein CspE [Escherichia coli KTE175]
gi|431453651|gb|ELH34035.1| cold shock-like protein CspE [Escherichia coli KTE183]
gi|431457002|gb|ELH37345.1| cold shock-like protein CspE [Escherichia coli KTE184]
gi|431462473|gb|ELH42684.1| cold shock-like protein CspE [Escherichia coli KTE196]
gi|431470254|gb|ELH50177.1| cold shock-like protein CspE [Escherichia coli KTE197]
gi|431473930|gb|ELH53753.1| cold shock-like protein CspE [Escherichia coli KTE203]
gi|431478232|gb|ELH57981.1| cold shock-like protein CspE [Escherichia coli KTE202]
gi|431482412|gb|ELH62115.1| cold shock-like protein CspE [Escherichia coli KTE209]
gi|431485902|gb|ELH65559.1| cold shock-like protein CspE [Escherichia coli KTE207]
gi|431494101|gb|ELH73691.1| cold shock-like protein CspE [Escherichia coli KTE211]
gi|431498150|gb|ELH77364.1| cold shock-like protein CspE [Escherichia coli KTE217]
gi|431506024|gb|ELH84628.1| cold shock-like protein CspE [Escherichia coli KTE215]
gi|431509713|gb|ELH87962.1| cold shock-like protein CspE [Escherichia coli KTE218]
gi|431514367|gb|ELH92209.1| cold shock-like protein CspE [Escherichia coli KTE223]
gi|431517439|gb|ELH94961.1| cold shock-like protein CspE [Escherichia coli KTE227]
gi|431519539|gb|ELH96991.1| cold shock-like protein CspE [Escherichia coli KTE229]
gi|431535094|gb|ELI11477.1| cold shock-like protein CspE [Escherichia coli KTE104]
gi|431536721|gb|ELI12878.1| cold shock-like protein CspE [Escherichia coli KTE105]
gi|431545702|gb|ELI20349.1| cold shock-like protein CspE [Escherichia coli KTE109]
gi|431555119|gb|ELI28977.1| cold shock-like protein CspE [Escherichia coli KTE113]
gi|431559140|gb|ELI32712.1| cold shock-like protein CspE [Escherichia coli KTE112]
gi|431559756|gb|ELI33294.1| cold shock-like protein CspE [Escherichia coli KTE117]
gi|431571892|gb|ELI44761.1| cold shock-like protein CspE [Escherichia coli KTE120]
gi|431573931|gb|ELI46720.1| cold shock-like protein CspE [Escherichia coli KTE124]
gi|431575144|gb|ELI47891.1| cold shock-like protein CspE [Escherichia coli KTE122]
gi|431587545|gb|ELI58918.1| cold shock-like protein CspE [Escherichia coli KTE125]
gi|431590239|gb|ELI61335.1| cold shock-like protein CspE [Escherichia coli KTE128]
gi|431592790|gb|ELI63359.1| cold shock-like protein CspE [Escherichia coli KTE129]
gi|431601362|gb|ELI70879.1| cold shock-like protein CspE [Escherichia coli KTE131]
gi|431605370|gb|ELI74759.1| cold shock-like protein CspE [Escherichia coli KTE133]
gi|431609293|gb|ELI78618.1| cold shock-like protein CspE [Escherichia coli KTE137]
gi|431614351|gb|ELI83506.1| cold shock-like protein CspE [Escherichia coli KTE138]
gi|431619585|gb|ELI88505.1| cold shock-like protein CspE [Escherichia coli KTE139]
gi|431622284|gb|ELI91065.1| cold shock-like protein CspE [Escherichia coli KTE145]
gi|431631123|gb|ELI99442.1| cold shock-like protein CspE [Escherichia coli KTE150]
gi|431634270|gb|ELJ02521.1| cold shock-like protein CspE [Escherichia coli KTE148]
gi|431637035|gb|ELJ05154.1| cold shock-like protein CspE [Escherichia coli KTE153]
gi|431648743|gb|ELJ16117.1| cold shock-like protein CspE [Escherichia coli KTE157]
gi|431650255|gb|ELJ17592.1| cold shock-like protein CspE [Escherichia coli KTE160]
gi|431651341|gb|ELJ18602.1| cold shock-like protein CspE [Escherichia coli KTE163]
gi|431662401|gb|ELJ29176.1| cold shock-like protein CspE [Escherichia coli KTE166]
gi|431665182|gb|ELJ31909.1| cold shock-like protein CspE [Escherichia coli KTE167]
gi|431665799|gb|ELJ32509.1| cold shock-like protein CspE [Escherichia coli KTE168]
gi|431676934|gb|ELJ43017.1| cold shock-like protein CspE [Escherichia coli KTE174]
gi|431678321|gb|ELJ44325.1| cold shock-like protein CspE [Escherichia coli KTE176]
gi|431681358|gb|ELJ47147.1| cold shock-like protein CspE [Escherichia coli KTE177]
gi|431691796|gb|ELJ57247.1| cold shock-like protein CspE [Escherichia coli KTE179]
gi|431693452|gb|ELJ58865.1| cold shock-like protein CspE [Escherichia coli KTE180]
gi|431695966|gb|ELJ61164.1| cold shock-like protein CspE [Escherichia coli KTE232]
gi|431709071|gb|ELJ73568.1| cold shock-like protein CspE [Escherichia coli KTE88]
gi|431709628|gb|ELJ74082.1| cold shock-like protein CspE [Escherichia coli KTE82]
gi|431711275|gb|ELJ75628.1| cold shock-like protein CspE [Escherichia coli KTE85]
gi|431720835|gb|ELJ84854.1| cold shock-like protein CspE [Escherichia coli KTE90]
gi|431725403|gb|ELJ89257.1| cold shock-like protein CspE [Escherichia coli KTE94]
gi|431725662|gb|ELJ89502.1| cold shock-like protein CspE [Escherichia coli KTE95]
gi|431732859|gb|ELJ96307.1| cold shock-like protein CspE [Escherichia coli KTE97]
gi|431736168|gb|ELJ99510.1| cold shock-like protein CspE [Escherichia coli KTE99]
gi|432348029|gb|ELL42481.1| cold shock protein CspE [Escherichia coli J96]
gi|440048095|gb|AGB79153.1| cold shock protein [Enterobacteriaceae bacterium strain FGI 57]
gi|441604196|emb|CCP98622.1| Cold shock protein CspE [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441654536|emb|CCQ00678.1| Cold shock protein CspE [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441712164|emb|CCQ07629.1| Cold shock protein CspE [Escherichia coli Nissle 1917]
gi|443421168|gb|AGC86072.1| cold shock protein CspE [Escherichia coli APEC O78]
gi|444542239|gb|ELV21623.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0814]
gi|444551558|gb|ELV29471.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0815]
gi|444564657|gb|ELV41585.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0839]
gi|444566808|gb|ELV43602.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0816]
gi|444571032|gb|ELV47533.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0848]
gi|444582008|gb|ELV57833.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1753]
gi|444584832|gb|ELV60436.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1775]
gi|444585825|gb|ELV61365.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1793]
gi|444599385|gb|ELV74272.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli ATCC 700728]
gi|444599761|gb|ELV74619.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA11]
gi|444614166|gb|ELV88404.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA13]
gi|444614375|gb|ELV88603.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA19]
gi|444622963|gb|ELV96906.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA2]
gi|444632088|gb|ELW05665.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA48]
gi|444632390|gb|ELW05961.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA47]
gi|444647231|gb|ELW20207.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 7.1982]
gi|444649737|gb|ELW22610.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1781]
gi|444653311|gb|ELW26034.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.1762]
gi|444662315|gb|ELW34576.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli PA35]
gi|444666777|gb|ELW38835.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 3.4880]
gi|444672525|gb|ELW44235.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 95.0083]
gi|444674282|gb|ELW45837.1| RNA chaperone, negative regulator of cspA transcription
[Escherichia coli 99.0670]
gi|449322396|gb|EMD12388.1| cold shock protein CspE [Escherichia coli O08]
gi|449324650|gb|EMD14575.1| cold shock protein CspE [Escherichia coli SEPT362]
gi|449324725|gb|EMD14649.1| cold shock protein CspE [Escherichia coli S17]
gi|455641612|gb|EMF20783.1| cold shock protein CspE [Citrobacter freundii GTC 09479]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|50121397|ref|YP_050564.1| cold shock protein [Pectobacterium atrosepticum SCRI1043]
gi|227328628|ref|ZP_03832652.1| cold shock protein [Pectobacterium carotovorum subsp. carotovorum
WPP14]
gi|261821404|ref|YP_003259510.1| cold-shock protein [Pectobacterium wasabiae WPP163]
gi|421079206|ref|ZP_15540151.1| Cold shock protein CspG [Pectobacterium wasabiae CFBP 3304]
gi|49611923|emb|CAG75372.1| cold shock protein [Pectobacterium atrosepticum SCRI1043]
gi|261605417|gb|ACX87903.1| cold-shock DNA-binding domain protein [Pectobacterium wasabiae
WPP163]
gi|385871643|gb|AFI90163.1| Cold shock-like protein cspI [Pectobacterium sp. SCC3193]
gi|401706393|gb|EJS96571.1| Cold shock protein CspG [Pectobacterium wasabiae CFBP 3304]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI + ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPDNGSKDVFVHFSAIQSND----FKTLDEGQKVEFTIE 56
Query: 90 QGDKGHEAINV 100
G KG A NV
Sbjct: 57 NGQKGPSAGNV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI + ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPDNGSKDVFVHFSAIQSND----FKTLDEGQKVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGQKG 61
>gi|422015212|ref|ZP_16361814.1| cold shock protein CspE [Providencia burhodogranariea DSM 19968]
gi|414099833|gb|EKT61467.1| cold shock protein CspE [Providencia burhodogranariea DSM 19968]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+KV G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF+I G
Sbjct: 2 SKVKGSVKWFNESKGFGFITPEDGSKDVFVHFSAITSDG----FKTLAEGQRVEFEITDG 57
Query: 92 DKGHEAINV 100
KG A+NV
Sbjct: 58 AKGPSAVNV 66
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+KV G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF+I G
Sbjct: 2 SKVKGSVKWFNESKGFGFITPEDGSKDVFVHFSAITSDG----FKTLAEGQRVEFEITDG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|418577173|ref|ZP_13141299.1| cold shock protein [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379324357|gb|EHY91509.1| cold shock protein [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 71
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI N DVFVH I ++ YK+L EG+ VEF+I++GD+G
Sbjct: 9 GTVKWFNAEKGFGFIEVEGGN-DVFVHFSAI----AQEGYKSLEEGQAVEFEIVEGDRGP 63
Query: 96 EAINVT 101
+A NV
Sbjct: 64 QAANVV 69
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI N DVFVH I ++ YK+L EG+ VEF+I++GD+G
Sbjct: 9 GTVKWFNAEKGFGFIEVEGGN-DVFVHFSAI----AQEGYKSLEEGQAVEFEIVEGDRGP 63
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 64 QAANVVK 70
>gi|348541643|ref|XP_003458296.1| PREDICTED: protein lin-28 homolog B-like [Oreochromis niloticus]
Length = 234
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 14 PSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRI 66
P+ + E + P VL+ G KWF+V+ G+GFI+ +S DVFVH ++
Sbjct: 14 PAKSAEQEEDRTRPQVLSGS--GFCKWFNVRMGFGFISMTNSEGSPVDPPLDVFVHQSKL 71
Query: 67 KYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAK 126
+++L EGE VEF + KG E++ VTGP G GS+ +PK K
Sbjct: 72 VMEG----FRSLKEGEQVEFTYKKSSKGLESLRVTGPGGGPCAGSE---RRPKG---KVP 121
Query: 127 ANKRKRKSRRNNRLFGVKYQ 146
KRK K R G+ +
Sbjct: 122 LQKRKPKGDRCYNCGGLDHH 141
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 181 PSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRI 233
P+ + E + P VL+ G KWF+V+ G+GFI+ +S DVFVH ++
Sbjct: 14 PAKSAEQEEDRTRPQVLSGS--GFCKWFNVRMGFGFISMTNSEGSPVDPPLDVFVHQSKL 71
Query: 234 KYNNPRKLYKTLAEGETVEFDIMQGDKG 261
+++L EGE VEF + KG
Sbjct: 72 VMEG----FRSLKEGEQVEFTYKKSSKG 95
>gi|323141266|ref|ZP_08076162.1| major cold shock protein CspA [Phascolarctobacterium succinatutens
YIT 12067]
gi|322414223|gb|EFY05046.1| major cold shock protein CspA [Phascolarctobacterium succinatutens
YIT 12067]
Length = 66
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI +D+FVH IK +KTL EG VEFD++QGD+G
Sbjct: 3 GKVKWFNAEKGYGFIQR-EGGKDLFVHFSGIKSEG----FKTLEEGWNVEFDVIQGDRGE 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QATNV 62
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI +D+FVH IK +KTL EG VEFD++QGD+G
Sbjct: 3 GKVKWFNAEKGYGFIQR-EGGKDLFVHFSGIKSEG----FKTLEEGWNVEFDVIQGDRGE 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|313671995|ref|YP_004050106.1| cold-shock protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312938751|gb|ADR17943.1| cold-shock DNA-binding domain protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ GYGFI T S+ EDVFVH I + +K+L EG+ V FDI++G KG
Sbjct: 4 TGTVKWFNDTKGYGFI-TSSTGEDVFVHYSAITMDG----FKSLKEGDKVNFDIVKGPKG 58
Query: 95 HEAINVT 101
+A NVT
Sbjct: 59 PQAANVT 65
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ GYGFI T S+ EDVFVH I + +K+L EG+ V FDI++G KG
Sbjct: 4 TGTVKWFNDTKGYGFI-TSSTGEDVFVHYSAITMDG----FKSLKEGDKVNFDIVKGPKG 58
Query: 262 NQFCFVLK 269
Q V K
Sbjct: 59 PQAANVTK 66
>gi|254459315|ref|ZP_05072736.1| 'Cold-shock' DNA-binding domain, putative [Sulfurimonas gotlandica
GD1]
gi|373866560|ref|ZP_09602958.1| protein containing cold-shock DNA-binding domain [Sulfurimonas
gotlandica GD1]
gi|207083928|gb|EDZ61219.1| 'Cold-shock' DNA-binding domain, putative [Sulfurimonas gotlandica
GD1]
gi|372468661|gb|EHP28865.1| protein containing cold-shock DNA-binding domain [Sulfurimonas
gotlandica GD1]
Length = 72
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A V G VKWF+ + G+GFI + +DVFVH +++ N ++ +L EG+ V F+I
Sbjct: 1 MAELVNGTVKWFNSEKGFGFIEQENGGKDVFVHFRQVNSNGYDRV--SLNEGQKVTFEIG 58
Query: 90 QGDKGHEAINVTG 102
+G+KG +A NVTG
Sbjct: 59 EGEKGPQAENVTG 71
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A V G VKWF+ + G+GFI + +DVFVH +++ N ++ +L EG+ V F+I
Sbjct: 1 MAELVNGTVKWFNSEKGFGFIEQENGGKDVFVHFRQVNSNGYDRV--SLNEGQKVTFEIG 58
Query: 257 QGDKGNQ 263
+G+KG Q
Sbjct: 59 EGEKGPQ 65
>gi|134095623|ref|YP_001100698.1| RNA chaperone [Herminiimonas arsenicoxydans]
gi|152983285|ref|YP_001354206.1| cold-shock DNA-binding domain-containing protein [Janthinobacterium
sp. Marseille]
gi|329905635|ref|ZP_08274166.1| Cold shock protein CspG [Oxalobacteraceae bacterium IMCC9480]
gi|340788449|ref|YP_004753914.1| RNA chaperone, transcription antiterminator, affects expression of
rpoS and uspA [Collimonas fungivorans Ter331]
gi|133739526|emb|CAL62577.1| Cold shock-like protein CspD (CSP-D) [Herminiimonas arsenicoxydans]
gi|151283362|gb|ABR91772.1| cold-shock DNA-binding domain protein [Janthinobacterium sp.
Marseille]
gi|327547557|gb|EGF32363.1| Cold shock protein CspG [Oxalobacteraceae bacterium IMCC9480]
gi|340553716|gb|AEK63091.1| RNA chaperone, transcription antiterminator, affects expression of
rpoS and uspA [Collimonas fungivorans Ter331]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V+F++ QG K
Sbjct: 2 ATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNG----FKTLKEGQKVQFEVTQGPK 57
Query: 94 GHEAINVTGP 103
G +A N+ P
Sbjct: 58 GKQASNIQAP 67
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
G VKWF+ G+GFI ED+F H I+ N +KTL EG+ V+F++ QG K
Sbjct: 2 ATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNG----FKTLKEGQKVQFEVTQGPK 57
Query: 261 GNQ 263
G Q
Sbjct: 58 GKQ 60
>gi|13375938|ref|NP_078950.1| protein lin-28 homolog A [Homo sapiens]
gi|74752750|sp|Q9H9Z2.1|LN28A_HUMAN RecName: Full=Protein lin-28 homolog A; Short=Lin-28A; AltName:
Full=Zinc finger CCHC domain-containing protein 1
gi|21842304|gb|AAM77751.1|AF521099_1 RNA-binding protein LIN-28 [Homo sapiens]
gi|10433955|dbj|BAB14075.1| unnamed protein product [Homo sapiens]
gi|20306208|gb|AAH28566.1| LIN28 protein [Homo sapiens]
gi|119628219|gb|EAX07814.1| lin-28 homolog (C. elegans), isoform CRA_a [Homo sapiens]
gi|123993445|gb|ABM84324.1| lin-28 homolog (C. elegans) [synthetic construct]
gi|124000419|gb|ABM87718.1| lin-28 homolog (C. elegans) [synthetic construct]
gi|261860154|dbj|BAI46599.1| lin-28 homolog [synthetic construct]
Length = 209
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKSMQKRRSKGDR 138
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|390436212|ref|ZP_10224750.1| cold shock-like protein cspA [Pantoea agglomerans IG1]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N YKTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPDDGSKDVFVHFSAIQGDN----YKTLDEGQKVSFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAGNVT 68
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N YKTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPDDGSKDVFVHFSAIQGDN----YKTLDEGQKVSFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|330447209|ref|ZP_08310859.1| 'Cold-shock' DNA-binding domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491400|dbj|GAA05356.1| 'Cold-shock' DNA-binding domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 71
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FD+ QG
Sbjct: 4 SKSTGSVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFDVEQG 59
Query: 92 DKGHEAINVTG 102
KG +A NV
Sbjct: 60 QKGLQAANVVA 70
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V FD+ QG
Sbjct: 4 SKSTGSVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFDVEQG 59
Query: 259 DKGNQ 263
KG Q
Sbjct: 60 QKGLQ 64
>gi|27366046|ref|NP_761574.1| Cold shock protein [Vibrio vulnificus CMCP6]
gi|37679688|ref|NP_934297.1| cold shock protein [Vibrio vulnificus YJ016]
gi|320156560|ref|YP_004188939.1| cold shock protein CspA [Vibrio vulnificus MO6-24/O]
gi|27362246|gb|AAO11101.1| Cold shock protein [Vibrio vulnificus CMCP6]
gi|37198433|dbj|BAC94268.1| cold shock protein [Vibrio vulnificus YJ016]
gi|319931872|gb|ADV86736.1| cold shock protein CspA [Vibrio vulnificus MO6-24/O]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI+ + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSGKMTGTVKWFNETKGFGFISQDNGGKDVFVHFRAI----VSEGFKTLAEGQKVSFNVE 56
Query: 90 QGDKGHEAINVT 101
+G KG +A NVT
Sbjct: 57 EGQKGPQASNVT 68
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI+ + +DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSGKMTGTVKWFNETKGFGFISQDNGGKDVFVHFRAI----VSEGFKTLAEGQKVSFNVE 56
Query: 257 QGDKGNQ 263
+G KG Q
Sbjct: 57 EGQKGPQ 63
>gi|423119242|ref|ZP_17106926.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5246]
gi|376399173|gb|EHT11793.1| cold shock-like protein CspE [Klebsiella oxytoca 10-5246]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|291616667|ref|YP_003519409.1| CspE [Pantoea ananatis LMG 20103]
gi|304395648|ref|ZP_07377531.1| cold-shock DNA-binding domain protein [Pantoea sp. aB]
gi|308186006|ref|YP_003930137.1| cold shock-like protein cspE (CSP-E) [Pantoea vagans C9-1]
gi|317047280|ref|YP_004114928.1| cold-shock DNA-binding domain-containing protein [Pantoea sp.
At-9b]
gi|372277449|ref|ZP_09513485.1| cold shock protein CspE [Pantoea sp. SL1_M5]
gi|378578870|ref|ZP_09827544.1| DNA-binding transcriptional repressor [Pantoea stewartii subsp.
stewartii DC283]
gi|378768135|ref|YP_005196605.1| cold shock protein CspE [Pantoea ananatis LMG 5342]
gi|381405341|ref|ZP_09930025.1| cold shock protein CspE [Pantoea sp. Sc1]
gi|386015033|ref|YP_005933311.1| cold shock-like protein CspE [Pantoea ananatis AJ13355]
gi|386080235|ref|YP_005993760.1| cold-shock DNA-binding domain-containing protein CspE [Pantoea
ananatis PA13]
gi|390435823|ref|ZP_10224361.1| cold shock protein CspE [Pantoea agglomerans IG1]
gi|291151697|gb|ADD76281.1| CspE [Pantoea ananatis LMG 20103]
gi|304356942|gb|EFM21306.1| cold-shock DNA-binding domain protein [Pantoea sp. aB]
gi|308056516|gb|ADO08688.1| Cold shock-like protein cspE (CSP-E) [Pantoea vagans C9-1]
gi|316948897|gb|ADU68372.1| cold-shock DNA-binding domain protein [Pantoea sp. At-9b]
gi|327393093|dbj|BAK10515.1| cold shock-like protein CspE [Pantoea ananatis AJ13355]
gi|354989416|gb|AER33540.1| cold-shock DNA-binding domain-containing protein CspE [Pantoea
ananatis PA13]
gi|365187618|emb|CCF10568.1| cold shock protein CspE [Pantoea ananatis LMG 5342]
gi|377818506|gb|EHU01588.1| DNA-binding transcriptional repressor [Pantoea stewartii subsp.
stewartii DC283]
gi|380738540|gb|EIB99603.1| cold shock protein CspE [Pantoea sp. Sc1]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITDG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITDG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|441521568|ref|ZP_21003227.1| putative cold shock protein [Gordonia sihwensis NBRC 108236]
gi|441458791|dbj|GAC61188.1| putative cold shock protein [Gordonia sihwensis NBRC 108236]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFIA S +EDVFVH I ++ L E + VEFD+ QG KG
Sbjct: 4 GTVKWFNGEKGFGFIAPDSGSEDVFVHYSAISGGG----FRNLEEAQRVEFDLEQGAKGP 59
Query: 96 EAINVT 101
+A NVT
Sbjct: 60 QATNVT 65
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFIA S +EDVFVH I ++ L E + VEFD+ QG KG
Sbjct: 4 GTVKWFNGEKGFGFIAPDSGSEDVFVHYSAISGGG----FRNLEEAQRVEFDLEQGAKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|386384676|ref|ZP_10070032.1| cold-shock DNA-binding domain-containing protein [Streptomyces
tsukubaensis NRRL18488]
gi|385667856|gb|EIF91243.1| cold-shock DNA-binding domain-containing protein [Streptomyces
tsukubaensis NRRL18488]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A + G VKWF+ + GYGFI TP S D+FVH + I+ N +K+L EG+TV F+ +
Sbjct: 1 MAERQNGTVKWFNDEKGYGFI-TPESGSDLFVHFRAIEGNG----FKSLKEGQTVTFEAV 55
Query: 90 QGDKGHEAINV 100
QG KG +A V
Sbjct: 56 QGQKGLQADKV 66
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A + G VKWF+ + GYGFI TP S D+FVH + I+ N +K+L EG+TV F+ +
Sbjct: 1 MAERQNGTVKWFNDEKGYGFI-TPESGSDLFVHFRAIEGNG----FKSLKEGQTVTFEAV 55
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 56 QGQKGLQ 62
>gi|374429557|ref|NP_001243408.1| protein lin-28 homolog A [Ovis aries]
gi|374082028|gb|AEY81218.1| LIN28A [Ovis aries]
Length = 209
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKT 77
+EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++
Sbjct: 33 EEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRS 86
Query: 78 LAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
L EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 87 LKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNVQKRRSKGDR 138
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKT 244
+EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++
Sbjct: 33 EEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRS 86
Query: 245 LAEGETVEFDIMQGDKG 261
L EGE VEF + KG
Sbjct: 87 LKEGEAVEFTFKKSAKG 103
>gi|356502875|ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
Length = 252
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVV+WF+ G+GFI ED+FVH I+ + Y+TL EG+ VEF I GD
Sbjct: 8 GVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDG----YRTLLEGDRVEFAIATGDNDK 63
Query: 96 -EAINVTGPDGRHVQ 109
+A++VTG DG +Q
Sbjct: 64 TKAVDVTGVDGAPLQ 78
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
GVV+WF+ G+GFI ED+FVH I+ + Y+TL EG+ VEF I GD
Sbjct: 8 GVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDG----YRTLLEGDRVEFAIATGD 60
>gi|163749217|ref|ZP_02156467.1| putative Cold shock-like protein [Shewanella benthica KT99]
gi|161331287|gb|EDQ02176.1| putative Cold shock-like protein [Shewanella benthica KT99]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSTTGLVKWFNEEKGFGFITQDNGGADVFVHFRSITSDG----FKTLAEGQKVSFEVE 56
Query: 90 QGDKGHEAINVTG 102
QG KG +A NV
Sbjct: 57 QGQKGLQAANVVA 69
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ G+VKWF+ + G+GFI + DVFVH + I + +KTLAEG+ V F++
Sbjct: 1 MSNSTTGLVKWFNEEKGFGFITQDNGGADVFVHFRSITSDG----FKTLAEGQKVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|163801267|ref|ZP_02195166.1| cold-shock DNA-binding domain protein [Vibrio sp. AND4]
gi|159174756|gb|EDP59556.1| cold-shock DNA-binding domain protein [Vibrio sp. AND4]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G VKWF+ G+GFI + D+FVH K I + +KTL EG+ V F++
Sbjct: 1 MSNKTTGSVKWFNESKGFGFITPDNGGSDLFVHFKSI----ASEGFKTLTEGQKVSFNVE 56
Query: 90 QGDKGHEAINVT 101
QG+KG +A NVT
Sbjct: 57 QGNKGPQAGNVT 68
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G VKWF+ G+GFI + D+FVH K I + +KTL EG+ V F++
Sbjct: 1 MSNKTTGSVKWFNESKGFGFITPDNGGSDLFVHFKSI----ASEGFKTLTEGQKVSFNVE 56
Query: 257 QGDKGNQ 263
QG+KG Q
Sbjct: 57 QGNKGPQ 63
>gi|403285171|ref|XP_003933909.1| PREDICTED: protein lin-28 homolog A-like [Saimiri boliviensis
boliviensis]
Length = 209
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 22/117 (18%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTAHAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSR 135
EGE VEF + KG E+I VTGP G GS+ RR N +KR+S+
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE---------RRPKGKNMQKRRSK 135
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTAHAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|225387921|ref|ZP_03757685.1| hypothetical protein CLOSTASPAR_01691 [Clostridium asparagiforme
DSM 15981]
gi|225045964|gb|EEG56210.1| hypothetical protein CLOSTASPAR_01691 [Clostridium asparagiforme
DSM 15981]
Length = 86
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI + ED+FVH I N +K+L +G++V FDI G++G
Sbjct: 23 GTVKWFNSQKGFGFITNSENGEDIFVHYSGIASNG----FKSLEDGQSVTFDITNGNRGL 78
Query: 96 EAINV 100
+A+NV
Sbjct: 79 QAVNV 83
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI + ED+FVH I N +K+L +G++V FDI G++G
Sbjct: 23 GTVKWFNSQKGFGFITNSENGEDIFVHYSGIASNG----FKSLEDGQSVTFDITNGNRGL 78
Query: 263 Q 263
Q
Sbjct: 79 Q 79
>gi|166032459|ref|ZP_02235288.1| hypothetical protein DORFOR_02174 [Dorea formicigenerans ATCC
27755]
gi|346309854|ref|ZP_08851922.1| cold shock-like protein cspC [Dorea formicigenerans 4_6_53AFAA]
gi|166026816|gb|EDR45573.1| cold-shock DNA-binding domain protein [Dorea formicigenerans ATCC
27755]
gi|345897282|gb|EGX67207.1| cold shock-like protein cspC [Dorea formicigenerans 4_6_53AFAA]
Length = 65
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI+ S N DVFVH + +K+L EG+ VEFD+ +G KG
Sbjct: 3 GTVKWFNNQKGYGFISDESGN-DVFVHYSGLNMEG----FKSLEEGQEVEFDVTEGAKGP 57
Query: 96 EAINVT 101
+A+NVT
Sbjct: 58 QAVNVT 63
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI+ S N DVFVH + +K+L EG+ VEFD+ +G KG
Sbjct: 3 GTVKWFNNQKGYGFISDESGN-DVFVHYSGLNMEG----FKSLEEGQEVEFDVTEGAKGP 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QAVNVTK 64
>gi|153006954|ref|YP_001381279.1| cold-shock DNA-binding domain-containing protein [Anaeromyxobacter
sp. Fw109-5]
gi|152030527|gb|ABS28295.1| putative cold-shock DNA-binding domain protein [Anaeromyxobacter
sp. Fw109-5]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI EDVF H I+ ++TLAEG+ VEFD+ +G KG
Sbjct: 4 GTVKWFNDAKGFGFITQDGGGEDVFCHHTAIQTQG----FRTLAEGQKVEFDVQRGPKGL 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAANV 64
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFI EDVF H I+ ++TLAEG+ VEFD+ +G KG
Sbjct: 4 GTVKWFNDAKGFGFITQDGGGEDVFCHHTAIQTQG----FRTLAEGQKVEFDVQRGPKGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|395854752|ref|XP_003799843.1| PREDICTED: protein lin-28 homolog A [Otolemur garnettii]
Length = 209
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 138
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|387774105|ref|ZP_10129379.1| cold-shock DNA-binding domain protein [Haemophilus parahaemolyticus
HK385]
gi|386902655|gb|EIJ67490.1| cold-shock DNA-binding domain protein [Haemophilus parahaemolyticus
HK385]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+ + G VKWF+ G+GFIA ED+FVH I+ N Y+TL EG V++++ +
Sbjct: 2 SALIGTVKWFNATKGFGFIAPEQGGEDIFVHFSAIENNGS---YRTLEEGAKVQYEVQKS 58
Query: 92 DKGHEAINV 100
D+G A+NV
Sbjct: 59 DRGLSAVNV 67
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+ + G VKWF+ G+GFIA ED+FVH I+ N Y+TL EG V++++ +
Sbjct: 2 SALIGTVKWFNATKGFGFIAPEQGGEDIFVHFSAIENNGS---YRTLEEGAKVQYEVQKS 58
Query: 259 DKG 261
D+G
Sbjct: 59 DRG 61
>gi|377578168|ref|ZP_09807147.1| cold shock-like protein CspE [Escherichia hermannii NBRC 105704]
gi|377540493|dbj|GAB52312.1| cold shock-like protein CspE [Escherichia hermannii NBRC 105704]
Length = 69
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|296207133|ref|XP_002750510.1| PREDICTED: protein lin-28 homolog A-like [Callithrix jacchus]
Length = 209
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 138
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|153006879|ref|YP_001381204.1| cold-shock DNA-binding domain-containing protein [Anaeromyxobacter
sp. Fw109-5]
gi|152030452|gb|ABS28220.1| putative cold-shock DNA-binding domain protein [Anaeromyxobacter
sp. Fw109-5]
Length = 67
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI S EDVF H I ++TLAEG+ VEFD+ +G KG
Sbjct: 4 GTVKWFNDAKGFGFITQDSGGEDVFCHHTAINAQG----FRTLAEGQKVEFDVTKGPKGL 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAANV 64
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFI S EDVF H I ++TLAEG+ VEFD+ +G KG
Sbjct: 4 GTVKWFNDAKGFGFITQDSGGEDVFCHHTAINAQG----FRTLAEGQKVEFDVTKGPKGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|146309868|ref|YP_001174942.1| cold-shock DNA-binding protein family protein [Enterobacter sp.
638]
gi|145316744|gb|ABP58891.1| cold-shock DNA-binding protein family [Enterobacter sp. 638]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ + G+GFI ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINV 100
G KG A+NV
Sbjct: 57 NGAKGPSAVNV 67
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ + G+GFI ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPQDGSKDVFVHFSAIQSSD----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|398867077|ref|ZP_10622547.1| cold shock domain protein CspD [Pseudomonas sp. GM78]
gi|398238194|gb|EJN23928.1| cold shock domain protein CspD [Pseudomonas sp. GM78]
Length = 88
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
KV G VKWF+ GYGFI ED+F H I+ YKTL G+ V F+I+Q
Sbjct: 3 GVKVSGKVKWFNNAKGYGFINEDGKTEDLFAHYSAIQMEG----YKTLKAGQAVVFEIIQ 58
Query: 91 GDKGHEAINVTGP 103
G KG A+N+ P
Sbjct: 59 GPKGLHAVNIGNP 71
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
KV G VKWF+ GYGFI ED+F H I+ YKTL G+ V F+I+Q
Sbjct: 3 GVKVSGKVKWFNNAKGYGFINEDGKTEDLFAHYSAIQMEG----YKTLKAGQAVVFEIIQ 58
Query: 258 GDKG 261
G KG
Sbjct: 59 GPKG 62
>gi|269139481|ref|YP_003296182.1| major cold shock protein [Edwardsiella tarda EIB202]
gi|387868060|ref|YP_005699529.1| Cold shock protein CspG [Edwardsiella tarda FL6-60]
gi|267985142|gb|ACY84971.1| major cold shock protein [Edwardsiella tarda EIB202]
gi|304559373|gb|ADM42037.1| Cold shock protein CspG [Edwardsiella tarda FL6-60]
Length = 71
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI+ ++DVFVH I+ N ++TL EG+ VEF +
Sbjct: 1 MSNKMTGSVKWFNADKGFGFISPADGSKDVFVHFSAIQSNE----FRTLDEGQQVEFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGPKGPSAVNVV 68
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI+ ++DVFVH I+ N ++TL EG+ VEF +
Sbjct: 1 MSNKMTGSVKWFNADKGFGFISPADGSKDVFVHFSAIQSNE----FRTLDEGQQVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGPKG 61
>gi|227111587|ref|ZP_03825243.1| cold shock protein [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
gi|253688227|ref|YP_003017417.1| cold-shock DNA-binding domain-containing protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|403058342|ref|YP_006646559.1| cold shock protein [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|251754805|gb|ACT12881.1| cold-shock DNA-binding domain protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|402805668|gb|AFR03306.1| cold shock protein [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF G+GFI + ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPDNGSKDVFVHFSAIQSND----FKTLDEGQKVEFTIE 56
Query: 90 QGDKGHEAINV 100
G KG A NV
Sbjct: 57 NGQKGPAAGNV 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF G+GFI + ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFITPDNGSKDVFVHFSAIQSND----FKTLDEGQKVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGQKG 61
>gi|403383131|ref|ZP_10925188.1| cold shock protein [Kurthia sp. JC30]
Length = 66
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF GYGFI T ED+FVH I ++TL EG+ V+FD+++G++G+
Sbjct: 4 GTVKWFDTVKGYGFIET-DQGEDIFVHFTGIVAEG----FRTLDEGQRVQFDVVEGNRGN 58
Query: 96 EAINVT 101
+A NVT
Sbjct: 59 QAANVT 64
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF GYGFI T ED+FVH I ++TL EG+ V+FD+++G++GN
Sbjct: 4 GTVKWFDTVKGYGFIET-DQGEDIFVHFTGIVAEG----FRTLDEGQRVQFDVVEGNRGN 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|304438239|ref|ZP_07398181.1| cold shock protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368846|gb|EFM22529.1| cold shock protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 72
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G VKWFS GYGFI+ + DVFVH I+ YKTL+EG+ VEFDI++G +
Sbjct: 7 MTGKVKWFSADKGYGFISREDGD-DVFVHFSSIQGEG----YKTLSEGQEVEFDIVEGAR 61
Query: 94 GHEAINVT 101
G +A NV
Sbjct: 62 GPQADNVV 69
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G VKWFS GYGFI+ + DVFVH I+ YKTL+EG+ VEFDI++G +
Sbjct: 7 MTGKVKWFSADKGYGFISREDGD-DVFVHFSSIQGEG----YKTLSEGQEVEFDIVEGAR 61
Query: 261 GNQFCFVLK 269
G Q V+K
Sbjct: 62 GPQADNVVK 70
>gi|429211507|ref|ZP_19202672.1| putative cold-shock protein [Pseudomonas sp. M1]
gi|428155989|gb|EKX02537.1| putative cold-shock protein [Pseudomonas sp. M1]
Length = 70
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ + G VKWF+ GYGFI TP S DVFVH + I+ + +KTLAEG+ V F+++
Sbjct: 1 MSNRQNGTVKWFNETKGYGFI-TPESGPDVFVHFRAIEGHG----FKTLAEGQKVSFEVV 55
Query: 90 QGDKGHEA 97
QG KG +A
Sbjct: 56 QGQKGMQA 63
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ + G VKWF+ GYGFI TP S DVFVH + I+ + +KTLAEG+ V F+++
Sbjct: 1 MSNRQNGTVKWFNETKGYGFI-TPESGPDVFVHFRAIEGHG----FKTLAEGQKVSFEVV 55
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 56 QGQKGMQ 62
>gi|408675780|ref|YP_006875607.1| cold shock protein [Streptomyces venezuelae ATCC 10712]
gi|328880109|emb|CCA53348.1| cold shock protein [Streptomyces venezuelae ATCC 10712]
Length = 67
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFIA DVF H I+ N Y+ L EGE V FDI QG KG
Sbjct: 4 GTVKWFNSEKGFGFIAQDGGGPDVFAHYSNIQGNG----YRELTEGEAVTFDITQGQKGP 59
Query: 96 EAINV 100
+A N+
Sbjct: 60 QAENI 64
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFIA DVF H I+ N Y+ L EGE V FDI QG KG
Sbjct: 4 GTVKWFNSEKGFGFIAQDGGGPDVFAHYSNIQGNG----YRELTEGEAVTFDITQGQKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|322833919|ref|YP_004213946.1| cold-shock protein [Rahnella sp. Y9602]
gi|383191082|ref|YP_005201210.1| cold shock protein [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|383814984|ref|ZP_09970401.1| cold shock protein CspE [Serratia sp. M24T3]
gi|384259101|ref|YP_005403035.1| cold shock protein CspE [Rahnella aquatilis HX2]
gi|321169120|gb|ADW74819.1| cold-shock DNA-binding domain protein [Rahnella sp. Y9602]
gi|371589340|gb|AEX53070.1| cold shock protein [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|380755077|gb|AFE59468.1| cold shock protein CspE [Rahnella aquatilis HX2]
gi|383296227|gb|EIC84544.1| cold shock protein CspE [Serratia sp. M24T3]
Length = 69
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAISSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAISSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|197116608|ref|YP_002137035.1| cold shock DNA/RNA-binding protein [Geobacter bemidjiensis Bem]
gi|197085968|gb|ACH37239.1| cold shock DNA/RNA-binding protein [Geobacter bemidjiensis Bem]
Length = 66
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVVKWF+ G+GFI + EDVFVH I+ + +K+LAEG++V FD+ QG KG
Sbjct: 4 GVVKWFNDSKGFGFI-EQENGEDVFVHFSAIQGDG----FKSLAEGDSVTFDVQQGPKGL 58
Query: 96 EAINVT 101
+A NVT
Sbjct: 59 QAANVT 64
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
GVVKWF+ G+GFI + EDVFVH I+ + +K+LAEG++V FD+ QG KG
Sbjct: 4 GVVKWFNDSKGFGFI-EQENGEDVFVHFSAIQGDG----FKSLAEGDSVTFDVQQGPKGL 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|402853517|ref|XP_003891439.1| PREDICTED: protein lin-28 homolog A [Papio anubis]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 138
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|397466557|ref|XP_003805019.1| PREDICTED: protein lin-28 homolog A-like [Pan paniscus]
gi|426328492|ref|XP_004025286.1| PREDICTED: protein lin-28 homolog A [Gorilla gorilla gorilla]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 138
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|372275884|ref|ZP_09511920.1| RNA chaperone/anti-terminator [Pantoea sp. SL1_M5]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N YKTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPDDGSKDVFVHFSAIQGDN----YKTLDEGQKVSFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAGNVT 68
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N YKTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFITPDDGSKDVFVHFSAIQGDN----YKTLDEGQKVSFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|158296117|ref|XP_316618.3| AGAP006591-PA [Anopheles gambiae str. PEST]
gi|157016359|gb|EAA11383.3| AGAP006591-PA [Anopheles gambiae str. PEST]
Length = 182
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 3 MCDSGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVH 62
M + G + + ++ SP + VL G KWF+V G+GFI ++VFVH
Sbjct: 11 MDNGGGCPPGSEQHAASQTSPNPDQEVLVGPRRGRCKWFNVVKGWGFITPDDGGQEVFVH 70
Query: 63 SKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNR 122
I+ +++L E E VEF+ KG+EA +V GP +GS F K
Sbjct: 71 QSVIQMGG----FRSLGENEEVEFESKLSAKGYEATSVYGPSHAECKGSDFRPYSKKRRF 126
Query: 123 RKAKA 127
RK +
Sbjct: 127 RKVRC 131
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 168 LQMCDSGTKAEATPSNPSASE-SPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDV 226
Q D+G +AS+ SP + VL G KWF+V G+GFI ++V
Sbjct: 8 FQSMDNGGGCPPGSEQHAASQTSPNPDQEVLVGPRRGRCKWFNVVKGWGFITPDDGGQEV 67
Query: 227 FVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
FVH I+ +++L E E VEF+ KG
Sbjct: 68 FVHQSVIQMGG----FRSLGENEEVEFESKLSAKG 98
>gi|420764886|ref|ZP_15238569.1| cold shock-like protein CspG [Yersinia pestis PY-71]
gi|391633876|gb|EIS73223.1| cold shock-like protein CspG [Yersinia pestis PY-71]
Length = 66
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I G KG
Sbjct: 3 GLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIENGAKGP 58
Query: 96 EAINV 100
A+NV
Sbjct: 59 AAVNV 63
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I G KG
Sbjct: 3 GLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQNVEFSIENGAKG 57
>gi|343500320|ref|ZP_08738215.1| cold-shock DNA-binding domain-containing protein [Vibrio tubiashii
ATCC 19109]
gi|418480892|ref|ZP_13049946.1| cold-shock DNA-binding domain-containing protein [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
gi|342820566|gb|EGU55386.1| cold-shock DNA-binding domain-containing protein [Vibrio tubiashii
ATCC 19109]
gi|384571476|gb|EIF02008.1| cold-shock DNA-binding domain-containing protein [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GFI + DVFVH + I +KTL EG+ V F++
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFITPENGGADVFVHFRAIASEG----FKTLKEGQQVSFEVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGPQAANV 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GFI + DVFVH + I +KTL EG+ V F++
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFITPENGGADVFVHFRAIASEG----FKTLKEGQQVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|297665898|ref|XP_002811262.1| PREDICTED: protein lin-28 homolog A [Pongo abelii]
gi|355557707|gb|EHH14487.1| hypothetical protein EGK_00420 [Macaca mulatta]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 138
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|397476183|ref|XP_003809489.1| PREDICTED: protein lin-28 homolog A [Pan paniscus]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 138
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|351697858|gb|EHB00777.1| Lin-28-like protein A [Heterocephalus glaber]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 22/117 (18%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSR 135
EGE VEF + KG E+I VTGP G GS+ RR N +KR+S+
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE---------RRPKGKNMQKRRSK 135
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|310644316|ref|YP_003949075.1| cold shock cspc [Paenibacillus polymyxa SC2]
gi|374320756|ref|YP_005073885.1| cold shock cspc [Paenibacillus terrae HPL-003]
gi|309249267|gb|ADO58834.1| Cold shock-like protein cspC [Paenibacillus polymyxa SC2]
gi|357199765|gb|AET57662.1| cold shock cspc [Paenibacillus terrae HPL-003]
gi|392305003|emb|CCI71366.1| Cold shock-like protein cspC [Paenibacillus polymyxa M1]
Length = 65
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T + DVFVH I+ +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIET-ADGGDVFVHFSAIQTEG----FKTLEEGQDVEFDIVEGARGP 57
Query: 96 EAINVT 101
+A NVT
Sbjct: 58 QAANVT 63
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T + DVFVH I+ +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIET-ADGGDVFVHFSAIQTEG----FKTLEEGQDVEFDIVEGARGP 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QAANVTK 64
>gi|238749794|ref|ZP_04611299.1| Cold shock-like protein cspD [Yersinia rohdei ATCC 43380]
gi|238712449|gb|EEQ04662.1| Cold shock-like protein cspD [Yersinia rohdei ATCC 43380]
Length = 85
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFI ED+F H I+ + Y+TL G+ V FD+ QG KGN
Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQMVNFDVHQGPKGN 59
Query: 263 QFCFVL 268
C ++
Sbjct: 60 HACLIV 65
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI ED+F H I+ + Y+TL G+ V FD+ QG KG+
Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQMVNFDVHQGPKGN 59
Query: 96 EA 97
A
Sbjct: 60 HA 61
>gi|86157415|ref|YP_464200.1| cold-shock DNA-binding protein family protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|197121458|ref|YP_002133409.1| cold-shock DNA-binding domain-containing protein [Anaeromyxobacter
sp. K]
gi|220916162|ref|YP_002491466.1| cold-shock DNA-binding domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|85773926|gb|ABC80763.1| cold-shock DNA-binding protein family [Anaeromyxobacter
dehalogenans 2CP-C]
gi|196171307|gb|ACG72280.1| cold-shock DNA-binding domain protein [Anaeromyxobacter sp. K]
gi|219954016|gb|ACL64400.1| cold-shock DNA-binding domain protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI +DVF H I+ + ++TLAEG+ VEFD+ +G KG
Sbjct: 4 GTVKWFNDAKGFGFITQDGGGDDVFCHHTAIQADG----FRTLAEGQKVEFDVTRGPKGL 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAANV 64
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFI +DVF H I+ + ++TLAEG+ VEFD+ +G KG
Sbjct: 4 GTVKWFNDAKGFGFITQDGGGDDVFCHHTAIQADG----FRTLAEGQKVEFDVTRGPKGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|395235375|ref|ZP_10413587.1| cold shock-like protein CspG [Enterobacter sp. Ag1]
gi|394729909|gb|EJF29824.1| cold shock-like protein CspG [Enterobacter sp. Ag1]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ + G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNAEKGFGFISPTDGSKDVFVHFSAIQSDS----FKTLDEGQKVEFSIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NV
Sbjct: 57 NGAKGPAAANVV 68
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ + G+GFI+ ++DVFVH I+ ++ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNAEKGFGFISPTDGSKDVFVHFSAIQSDS----FKTLDEGQKVEFSIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|339443256|ref|YP_004709261.1| hypothetical protein CXIVA_21920 [Clostridium sp. SY8519]
gi|338902657|dbj|BAK48159.1| hypothetical protein CXIVA_21920 [Clostridium sp. SY8519]
Length = 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ K GYGFI+ N DVFVH + + +K L +GE+VEF+++QG+KG
Sbjct: 4 GTVKWFNAKKGYGFISDAEGN-DVFVHFSALNMDG----FKELKDGESVEFEVVQGEKGP 58
Query: 96 EAINVT 101
+A NV
Sbjct: 59 QAANVN 64
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ K GYGFI+ N DVFVH + + +K L +GE+VEF+++QG+KG
Sbjct: 4 GTVKWFNAKKGYGFISDAEGN-DVFVHFSALNMDG----FKELKDGESVEFEVVQGEKGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|153005392|ref|YP_001379717.1| cold-shock DNA-binding domain-containing protein [Anaeromyxobacter
sp. Fw109-5]
gi|152028965|gb|ABS26733.1| putative cold-shock DNA-binding domain protein [Anaeromyxobacter
sp. Fw109-5]
Length = 65
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI+ EDVFVH I+ + ++TL EGE VEFD+ QG KG
Sbjct: 4 GTVKWFNDAKGFGFISQ-EGGEDVFVHHTAIQMDG----FRTLKEGERVEFDVTQGPKGL 58
Query: 96 EAINV 100
+A NV
Sbjct: 59 QAANV 63
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFI+ EDVFVH I+ + ++TL EGE VEFD+ QG KG
Sbjct: 4 GTVKWFNDAKGFGFISQ-EGGEDVFVHHTAIQMDG----FRTLKEGERVEFDVTQGPKGL 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|157816953|ref|NP_001102739.1| protein lin-28 homolog A [Rattus norvegicus]
gi|149024199|gb|EDL80696.1| rCG30757 [Rattus norvegicus]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 36 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
G+ KWF+V+ G+GF++ + DVFVH ++ +++L EGE VEF
Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 97
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
+ KG E+I VTGP G GS+ +R++K ++
Sbjct: 98 KKSAKGLESIRVTGPGGVFCIGSERRPKGKSMQKRRSKGDR 138
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
G+ KWF+V+ G+GF++ + DVFVH ++ +++L EGE VEF
Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 97
Query: 256 MQGDKG 261
+ KG
Sbjct: 98 KKSAKG 103
>gi|431926641|ref|YP_007239675.1| cold shock protein [Pseudomonas stutzeri RCH2]
gi|431824928|gb|AGA86045.1| cold shock protein [Pseudomonas stutzeri RCH2]
Length = 204
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 12 ATPSNPSANESPKKEPV-----VLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI 66
ATP A P ++P A + G VKWF+ G+GFI+ S +DVFVH + I
Sbjct: 109 ATPQAQRAQPKPARKPAGTSAPSAAGREAGTVKWFNTSKGFGFISR-DSGDDVFVHFRAI 167
Query: 67 KYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVT 101
+ ++ L EG+ VEF IM DKG +A +V
Sbjct: 168 RGEG----HRVLVEGQRVEFSIMMRDKGLQAEDVV 198
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 150 PMEFSSKTMPFFMILFCCLQMCDSGTKAEATPSN-PSASESPKKEPVVLATKVCGVVKWF 208
P +S + F +L +A+ P+ P+ + +P A + G VKWF
Sbjct: 91 PATLASLLLAFIAVLLHL--ATPQAQRAQPKPARKPAGTSAPSA-----AGREAGTVKWF 143
Query: 209 SVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGNQ 263
+ G+GFI+ S +DVFVH + I+ ++ L EG+ VEF IM DKG Q
Sbjct: 144 NTSKGFGFISR-DSGDDVFVHFRAIRGEG----HRVLVEGQRVEFSIMMRDKGLQ 193
>gi|347534826|ref|YP_004841496.1| Cold shock protein 2 [Lactobacillus sanfranciscensis TMW 1.1304]
gi|347534827|ref|YP_004841497.1| Cold shock protein 2 [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504882|gb|AEN99564.1| Cold shock protein 2 [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504883|gb|AEN99565.1| Cold shock protein 2 [Lactobacillus sanfranciscensis TMW 1.1304]
Length = 83
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGFI T + DVFVH I + +KTL EGE V D+ GD+G
Sbjct: 20 GTVKWFNADKGYGFITT--DDGDVFVHFSAINKDG----FKTLDEGEKVTLDVEDGDRGP 73
Query: 96 EAINVTGPDG 105
+A NVT +G
Sbjct: 74 QAANVTPVEG 83
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGFI T + DVFVH I + +KTL EGE V D+ GD+G
Sbjct: 20 GTVKWFNADKGYGFITT--DDGDVFVHFSAINKDG----FKTLDEGEKVTLDVEDGDRGP 73
Query: 263 Q 263
Q
Sbjct: 74 Q 74
>gi|145300857|ref|YP_001143698.1| major cold shock protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|330828121|ref|YP_004391073.1| cold shock-like protein CspI [Aeromonas veronii B565]
gi|406674624|ref|ZP_11081818.1| cold shock-like protein CspB [Aeromonas veronii AMC35]
gi|418361413|ref|ZP_12962068.1| Cold shock-like protein cspI [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|423203402|ref|ZP_17189980.1| cold shock-like protein CspB [Aeromonas veronii AER39]
gi|423204194|ref|ZP_17190750.1| cold shock-like protein CspB [Aeromonas veronii AMC34]
gi|423211192|ref|ZP_17197745.1| cold shock-like protein CspB [Aeromonas veronii AER397]
gi|142853629|gb|ABO91950.1| major cold shock protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|328803257|gb|AEB48456.1| Cold shock-like protein cspI [Aeromonas veronii B565]
gi|356687443|gb|EHI52025.1| Cold shock-like protein cspI [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|404613146|gb|EKB10182.1| cold shock-like protein CspB [Aeromonas veronii AER39]
gi|404613787|gb|EKB10800.1| cold shock-like protein CspB [Aeromonas veronii AER397]
gi|404627399|gb|EKB24200.1| cold shock-like protein CspB [Aeromonas veronii AMC34]
gi|404628627|gb|EKB25402.1| cold shock-like protein CspB [Aeromonas veronii AMC35]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VK+F+ + G+GFI+ ++DVFVH I+ + +KTL EG+ VEF I
Sbjct: 1 MSNKMTGTVKFFNAEKGFGFISPADGSKDVFVHFSAIQSTS----FKTLDEGQRVEFTIE 56
Query: 90 QGDKGHEAINVTG 102
QG KG A NV G
Sbjct: 57 QGQKGPAAANVVG 69
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VK+F+ + G+GFI+ ++DVFVH I+ + +KTL EG+ VEF I
Sbjct: 1 MSNKMTGTVKFFNAEKGFGFISPADGSKDVFVHFSAIQSTS----FKTLDEGQRVEFTIE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGQKG 61
>gi|119718488|ref|YP_925453.1| cold-shock DNA-binding protein family protein [Nocardioides sp.
JS614]
gi|119539149|gb|ABL83766.1| cold-shock DNA-binding protein family [Nocardioides sp. JS614]
Length = 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFIA +DVFVH I+ YK+L E + VEFD+ QG KG
Sbjct: 4 GTVKWFNAEKGFGFIAQEDGGDDVFVHYSAIQTQG----YKSLDENQKVEFDVTQGPKGP 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAENV 64
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFIA +DVFVH I+ YK+L E + VEFD+ QG KG
Sbjct: 4 GTVKWFNAEKGFGFIAQEDGGDDVFVHYSAIQTQG----YKSLDENQKVEFDVTQGPKGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|355745051|gb|EHH49676.1| hypothetical protein EGM_00377 [Macaca fascicularis]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 138
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|340354735|ref|ZP_08677436.1| cold shock protein CspA [Sporosarcina newyorkensis 2681]
gi|339623134|gb|EGQ27640.1| cold shock protein CspA [Sporosarcina newyorkensis 2681]
Length = 71
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWFS GYGFI EDVFVH I + +KTLAEG+TV F++++G++G
Sbjct: 4 GKVKWFSSDKGYGFIEA-DDGEDVFVHFTGIATDG----FKTLAEGQTVSFEVIEGNRGP 58
Query: 96 EAINVT 101
+A NV+
Sbjct: 59 QAANVS 64
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWFS GYGFI EDVFVH I + +KTLAEG+TV F++++G++G
Sbjct: 4 GKVKWFSSDKGYGFIEA-DDGEDVFVHFTGIATDG----FKTLAEGQTVSFEVIEGNRGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|123443227|ref|YP_001007201.1| cold shock protein CspE [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238752587|ref|ZP_04614060.1| Cold shock-like protein cspE [Yersinia rohdei ATCC 43380]
gi|332160847|ref|YP_004297424.1| cold shock protein CspE [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|386309377|ref|YP_006005433.1| cold shock protein CspE [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418240629|ref|ZP_12867167.1| cold shock protein CspE [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|420257639|ref|ZP_14760394.1| cold shock protein CspE [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433550455|ref|ZP_20506499.1| Cold shock protein CspE [Yersinia enterocolitica IP 10393]
gi|122090188|emb|CAL13051.1| cold shock-like protein cspE1 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238709178|gb|EEQ01423.1| Cold shock-like protein cspE [Yersinia rohdei ATCC 43380]
gi|318604749|emb|CBY26247.1| cold shock protein CspE [Yersinia enterocolitica subsp. palearctica
Y11]
gi|325665077|gb|ADZ41721.1| cold shock protein CspE [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330863376|emb|CBX73498.1| cold shock-like protein cspE [Yersinia enterocolitica W22703]
gi|351780042|gb|EHB22131.1| cold shock protein CspE [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|404514925|gb|EKA28705.1| cold shock protein CspE [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431789590|emb|CCO69539.1| Cold shock protein CspE [Yersinia enterocolitica IP 10393]
Length = 69
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNEAKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFEITSG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNEAKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFEITSG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|357059074|ref|ZP_09119919.1| cold shock-like protein cspC [Selenomonas infelix ATCC 43532]
gi|355372982|gb|EHG20320.1| cold shock-like protein cspC [Selenomonas infelix ATCC 43532]
Length = 66
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G VKWFS GYGFI + + +DVFVH I+ YKTL+EG+ VEFDI++G +
Sbjct: 1 MTGKVKWFSADKGYGFI-SRADGDDVFVHFSSIQGEG----YKTLSEGQEVEFDIVEGAR 55
Query: 94 GHEAINVT 101
G +A NV
Sbjct: 56 GPQADNVV 63
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G VKWFS GYGFI + + +DVFVH I+ YKTL+EG+ VEFDI++G +
Sbjct: 1 MTGKVKWFSADKGYGFI-SRADGDDVFVHFSSIQGEG----YKTLSEGQEVEFDIVEGAR 55
Query: 261 GNQFCFVLK 269
G Q V+K
Sbjct: 56 GPQADNVVK 64
>gi|332245102|ref|XP_003271702.1| PREDICTED: protein lin-28 homolog A [Nomascus leucogenys]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKNMQKRRSKGDR 138
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|51595435|ref|YP_069626.1| cold shock protein CspE [Yersinia pseudotuberculosis IP 32953]
gi|108808497|ref|YP_652413.1| cold shock protein CspE [Yersinia pestis Antiqua]
gi|145599922|ref|YP_001163998.1| cold shock protein CspE [Yersinia pestis Pestoides F]
gi|149365504|ref|ZP_01887539.1| putative cold shock protein [Yersinia pestis CA88-4125]
gi|153947984|ref|YP_001401920.1| cold shock protein CspE [Yersinia pseudotuberculosis IP 31758]
gi|161484846|ref|NP_668492.2| cold shock protein CspE [Yersinia pestis KIM10+]
gi|161511416|ref|NP_992489.2| cold shock protein CspE [Yersinia pestis biovar Microtus str.
91001]
gi|162418633|ref|YP_001606345.1| cold shock protein CspE [Yersinia pestis Angola]
gi|165925190|ref|ZP_02221022.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937609|ref|ZP_02226171.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166008509|ref|ZP_02229407.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166212360|ref|ZP_02238395.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167398559|ref|ZP_02304083.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167422542|ref|ZP_02314295.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167423259|ref|ZP_02315012.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|170025252|ref|YP_001721757.1| cold shock protein CspE [Yersinia pseudotuberculosis YPIII]
gi|186894465|ref|YP_001871577.1| cold shock protein CspE [Yersinia pseudotuberculosis PB1/+]
gi|218929676|ref|YP_002347551.1| cold shock protein CspE [Yersinia pestis CO92]
gi|229838141|ref|ZP_04458300.1| DNA-binding transcriptional repressor [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229895932|ref|ZP_04511102.1| DNA-binding transcriptional repressor [Yersinia pestis Pestoides A]
gi|229898749|ref|ZP_04513894.1| DNA-binding transcriptional repressor [Yersinia pestis biovar
Orientalis str. India 195]
gi|229901480|ref|ZP_04516602.1| DNA-binding transcriptional repressor [Yersinia pestis Nepal516]
gi|238755048|ref|ZP_04616396.1| Cold shock-like protein cspE [Yersinia ruckeri ATCC 29473]
gi|238758047|ref|ZP_04619228.1| hypothetical protein yaldo0001_9270 [Yersinia aldovae ATCC 35236]
gi|238762891|ref|ZP_04623859.1| Cold shock-like protein cspE [Yersinia kristensenii ATCC 33638]
gi|238785727|ref|ZP_04629701.1| Cold shock-like protein cspE [Yersinia bercovieri ATCC 43970]
gi|238791629|ref|ZP_04635267.1| Cold shock-like protein cspE [Yersinia intermedia ATCC 29909]
gi|238795419|ref|ZP_04638934.1| Cold shock-like protein cspE [Yersinia mollaretii ATCC 43969]
gi|270263689|ref|ZP_06191958.1| Cold shock-like protein CspE [Serratia odorifera 4Rx13]
gi|270489665|ref|ZP_06206739.1| cold shock protein CspE [Yersinia pestis KIM D27]
gi|284988376|ref|YP_003422335.1| cold shock protein [Yersinia pestis Nepal516]
gi|293392426|ref|ZP_06636748.1| CspA family cold shock transcriptional regulator [Serratia
odorifera DSM 4582]
gi|333926029|ref|YP_004499608.1| cold-shock DNA-binding domain-containing protein [Serratia sp.
AS12]
gi|333930982|ref|YP_004504560.1| cold-shock DNA-binding domain-containing protein [Serratia
plymuthica AS9]
gi|384139573|ref|YP_005522275.1| cold shock protein CspE [Yersinia pestis A1122]
gi|386327852|ref|YP_006024022.1| cold-shock protein [Serratia sp. AS13]
gi|386824545|ref|ZP_10111678.1| cold shock protein CspE [Serratia plymuthica PRI-2C]
gi|420547564|ref|ZP_15045440.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-01]
gi|420552900|ref|ZP_15050214.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-02]
gi|420558459|ref|ZP_15055079.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-03]
gi|420563917|ref|ZP_15059938.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-04]
gi|420568952|ref|ZP_15064510.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-05]
gi|420574593|ref|ZP_15069616.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-06]
gi|420579903|ref|ZP_15074436.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-07]
gi|420585265|ref|ZP_15079300.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-08]
gi|420590396|ref|ZP_15083916.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-09]
gi|420595774|ref|ZP_15088752.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-10]
gi|420601427|ref|ZP_15093790.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-11]
gi|420606859|ref|ZP_15098687.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-12]
gi|420612259|ref|ZP_15103539.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-13]
gi|420617634|ref|ZP_15108250.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|420622933|ref|ZP_15112994.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-15]
gi|420628002|ref|ZP_15117590.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-16]
gi|420633144|ref|ZP_15122213.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-19]
gi|420638344|ref|ZP_15126884.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-25]
gi|420643850|ref|ZP_15131891.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-29]
gi|420649099|ref|ZP_15136653.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-32]
gi|420654746|ref|ZP_15141727.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-34]
gi|420660223|ref|ZP_15146646.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-36]
gi|420665532|ref|ZP_15151403.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-42]
gi|420670404|ref|ZP_15155836.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|420675766|ref|ZP_15160716.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-46]
gi|420681374|ref|ZP_15165790.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-47]
gi|420686676|ref|ZP_15170517.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-48]
gi|420691880|ref|ZP_15175091.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-52]
gi|420697640|ref|ZP_15180148.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-53]
gi|420703378|ref|ZP_15184802.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|420708878|ref|ZP_15189560.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-55]
gi|420714329|ref|ZP_15194428.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-56]
gi|420719822|ref|ZP_15199170.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-58]
gi|420725317|ref|ZP_15203970.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-59]
gi|420730908|ref|ZP_15208983.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-60]
gi|420735941|ref|ZP_15213533.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-61]
gi|420741417|ref|ZP_15218455.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-63]
gi|420747047|ref|ZP_15223256.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-64]
gi|420752576|ref|ZP_15228141.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-65]
gi|420758202|ref|ZP_15232754.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-66]
gi|420763611|ref|ZP_15237407.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-71]
gi|420768826|ref|ZP_15242095.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-72]
gi|420773824|ref|ZP_15246608.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-76]
gi|420779395|ref|ZP_15251529.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-88]
gi|420784991|ref|ZP_15256431.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-89]
gi|420790189|ref|ZP_15261075.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|420795701|ref|ZP_15266033.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-91]
gi|420800758|ref|ZP_15270574.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-92]
gi|420806136|ref|ZP_15275439.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-93]
gi|420811454|ref|ZP_15280229.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|420816980|ref|ZP_15285205.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-95]
gi|420822313|ref|ZP_15290001.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-96]
gi|420827392|ref|ZP_15294560.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-98]
gi|420833093|ref|ZP_15299710.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-99]
gi|420837954|ref|ZP_15304107.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-100]
gi|420843135|ref|ZP_15308805.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-101]
gi|420848793|ref|ZP_15313892.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-102]
gi|420854361|ref|ZP_15318657.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-103]
gi|420859655|ref|ZP_15323271.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-113]
gi|421764085|ref|ZP_16200877.1| cold shock protein CspE [Yersinia pestis INS]
gi|421782118|ref|ZP_16218577.1| cold shock protein CspE [Serratia plymuthica A30]
gi|51588717|emb|CAH20328.1| putative cold shock protein [Yersinia pseudotuberculosis IP 32953]
gi|108780410|gb|ABG14468.1| cold shock protein E (CspE) [Yersinia pestis Antiqua]
gi|115348287|emb|CAL21218.1| putative cold shock protein [Yersinia pestis CO92]
gi|145211618|gb|ABP41025.1| cold shock protein E (CspE) [Yersinia pestis Pestoides F]
gi|149291917|gb|EDM41991.1| putative cold shock protein [Yersinia pestis CA88-4125]
gi|152959479|gb|ABS46940.1| cold shock DNA-binding domain protein [Yersinia pseudotuberculosis
IP 31758]
gi|162351448|gb|ABX85396.1| cold shock DNA-binding domain protein [Yersinia pestis Angola]
gi|165914359|gb|EDR32974.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922797|gb|EDR39948.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992891|gb|EDR45192.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166206291|gb|EDR50771.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166958556|gb|EDR55577.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051063|gb|EDR62471.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167057429|gb|EDR67175.1| cold shock DNA-binding domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751786|gb|ACA69304.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
YPIII]
gi|186697491|gb|ACC88120.1| cold-shock DNA-binding domain protein [Yersinia pseudotuberculosis
PB1/+]
gi|229681409|gb|EEO77503.1| DNA-binding transcriptional repressor [Yersinia pestis Nepal516]
gi|229688297|gb|EEO80368.1| DNA-binding transcriptional repressor [Yersinia pestis biovar
Orientalis str. India 195]
gi|229694507|gb|EEO84554.1| DNA-binding transcriptional repressor [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229700855|gb|EEO88884.1| DNA-binding transcriptional repressor [Yersinia pestis Pestoides A]
gi|238698902|gb|EEP91651.1| Cold shock-like protein cspE [Yersinia kristensenii ATCC 33638]
gi|238703801|gb|EEP96337.1| hypothetical protein yaldo0001_9270 [Yersinia aldovae ATCC 35236]
gi|238706752|gb|EEP99121.1| Cold shock-like protein cspE [Yersinia ruckeri ATCC 29473]
gi|238713367|gb|EEQ05405.1| Cold shock-like protein cspE [Yersinia bercovieri ATCC 43970]
gi|238720538|gb|EEQ12339.1| Cold shock-like protein cspE [Yersinia mollaretii ATCC 43969]
gi|238729245|gb|EEQ20761.1| Cold shock-like protein cspE [Yersinia intermedia ATCC 29909]
gi|270042573|gb|EFA15668.1| Cold shock-like protein CspE [Serratia odorifera 4Rx13]
gi|270338169|gb|EFA48946.1| cold shock protein CspE [Yersinia pestis KIM D27]
gi|291425080|gb|EFE98287.1| CspA family cold shock transcriptional regulator [Serratia
odorifera DSM 4582]
gi|333472589|gb|AEF44299.1| cold-shock DNA-binding domain protein [Serratia plymuthica AS9]
gi|333490089|gb|AEF49251.1| cold-shock DNA-binding domain protein [Serratia sp. AS12]
gi|333960185|gb|AEG26958.1| cold-shock DNA-binding domain protein [Serratia sp. AS13]
gi|342854702|gb|AEL73255.1| cold shock protein CspE [Yersinia pestis A1122]
gi|386378502|gb|EIJ19306.1| cold shock protein CspE [Serratia plymuthica PRI-2C]
gi|391424826|gb|EIQ87165.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-01]
gi|391426152|gb|EIQ88363.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-02]
gi|391426871|gb|EIQ89021.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-03]
gi|391440167|gb|EIR00765.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-04]
gi|391441679|gb|EIR02149.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-05]
gi|391445066|gb|EIR05231.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-06]
gi|391457134|gb|EIR16101.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-07]
gi|391458011|gb|EIR16909.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-08]
gi|391460274|gb|EIR18992.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-09]
gi|391473041|gb|EIR30451.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-10]
gi|391474771|gb|EIR32033.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-11]
gi|391475581|gb|EIR32768.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-12]
gi|391489264|gb|EIR45036.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-13]
gi|391490478|gb|EIR46129.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-15]
gi|391491923|gb|EIR47435.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-14]
gi|391504617|gb|EIR58695.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-16]
gi|391505442|gb|EIR59453.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-19]
gi|391510177|gb|EIR63738.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-25]
gi|391520646|gb|EIR73185.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-29]
gi|391522830|gb|EIR75190.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-34]
gi|391524054|gb|EIR76321.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-32]
gi|391535919|gb|EIR86954.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-36]
gi|391538588|gb|EIR89385.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-42]
gi|391540723|gb|EIR91327.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-45]
gi|391553819|gb|EIS03117.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-46]
gi|391554262|gb|EIS03523.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-47]
gi|391555293|gb|EIS04470.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-48]
gi|391568861|gb|EIS16533.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-52]
gi|391569868|gb|EIS17404.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-53]
gi|391575799|gb|EIS22451.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-54]
gi|391582675|gb|EIS28413.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-55]
gi|391585403|gb|EIS30814.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-56]
gi|391596266|gb|EIS40219.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-58]
gi|391598695|gb|EIS42387.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-60]
gi|391600309|gb|EIS43854.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-59]
gi|391613161|gb|EIS55158.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-61]
gi|391613727|gb|EIS55667.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-63]
gi|391617861|gb|EIS59364.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-64]
gi|391625875|gb|EIS66317.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-65]
gi|391632703|gb|EIS72200.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-66]
gi|391636779|gb|EIS75777.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-71]
gi|391639202|gb|EIS77922.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-72]
gi|391648892|gb|EIS86356.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-76]
gi|391652971|gb|EIS89987.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-88]
gi|391657505|gb|EIS94004.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-89]
gi|391661859|gb|EIS97865.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-90]
gi|391669848|gb|EIT04950.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-91]
gi|391679040|gb|EIT13207.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-93]
gi|391680088|gb|EIT14165.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-92]
gi|391680994|gb|EIT14996.1| 'Cold-shock' DNA-binding domain protein [Yersinia pestis PY-94]
gi|391692959|gb|EIT25747.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-95]
gi|391696010|gb|EIT28539.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-96]
gi|391697770|gb|EIT30136.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-98]
gi|391708741|gb|EIT39979.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-99]
gi|391713368|gb|EIT44150.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-100]
gi|391714055|gb|EIT44776.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-101]
gi|391725363|gb|EIT54837.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-102]
gi|391727228|gb|EIT56477.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-103]
gi|391733749|gb|EIT62089.1| RNA chaperone, negative regulator of cspA transcription [Yersinia
pestis PY-113]
gi|407755674|gb|EKF65798.1| cold shock protein CspE [Serratia plymuthica A30]
gi|411175399|gb|EKS45425.1| cold shock protein CspE [Yersinia pestis INS]
Length = 69
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|354495321|ref|XP_003509779.1| PREDICTED: LOW QUALITY PROTEIN: protein lin-28 homolog A-like
[Cricetulus griseus]
Length = 202
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 20/107 (18%)
Query: 36 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
G+ KWF+V+ G+GF++ + DVFVH ++ +++L EGE VEF
Sbjct: 35 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 90
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSR 135
+ KG E+I VTGP G GS+ RR N +KR+S+
Sbjct: 91 KKSAKGLESIRVTGPGGVFCIGSE---------RRPKGKNMQKRRSK 128
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
G+ KWF+V+ G+GF++ + DVFVH ++ +++L EGE VEF
Sbjct: 35 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 90
Query: 256 MQGDKG 261
+ KG
Sbjct: 91 KKSAKG 96
>gi|323492820|ref|ZP_08097962.1| cold-shock DNA-binding domain-containing protein [Vibrio
brasiliensis LMG 20546]
gi|323312891|gb|EGA66013.1| cold-shock DNA-binding domain-containing protein [Vibrio
brasiliensis LMG 20546]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GFI + DVFVH + I + +KTL EG+ V F++
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFITPENGGADVFVHFRAI----ASEGFKTLKEGQQVSFEVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGPQAANV 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GFI + DVFVH + I + +KTL EG+ V F++
Sbjct: 1 MSNKTTGIVKWFNEEKGFGFITPENGGADVFVHFRAI----ASEGFKTLKEGQQVSFEVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGPQ 63
>gi|354495195|ref|XP_003509716.1| PREDICTED: protein lin-28 homolog B-like [Cricetulus griseus]
Length = 301
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 36 GVVKWFSVKSGYGFIATPSSNED-------VFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
G KWF+V+ G+GFI+ + D VFVH ++ +++L EGE VEF
Sbjct: 63 GHCKWFNVRMGFGFISMINREGDPLDIPVDVFVHQSKLFMEG----FRSLKEGEPVEFTF 118
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSRRNNRLFGVKYQ 146
+ KG E+I VTGP G GS+ +RK K ++ +R+ ++++ V+ +
Sbjct: 119 KKSPKGLESIRVTGPGGSPCLGSERRPKGKTQPKRKPKGDRWRRQDLLMDQMWTVREE 176
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
G KWF+V+ G+GFI+ + DVFVH ++ +++L EGE VEF
Sbjct: 63 GHCKWFNVRMGFGFISMINREGDPLDIPVDVFVHQSKLFMEG----FRSLKEGEPVEFTF 118
Query: 256 MQGDKG 261
+ KG
Sbjct: 119 KKSPKG 124
>gi|244539314|dbj|BAH83357.1| cold shock protein E [Candidatus Ishikawaella capsulata Mpkobe]
Length = 72
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
++K G VKWF+ G+GFI ++DVFVH I+ +KTLAEG++VEF+I +
Sbjct: 3 SSKKKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQGQG----FKTLAEGQSVEFEITE 58
Query: 91 GDKGHEAINVT 101
G KG A NVT
Sbjct: 59 GAKGPSAANVT 69
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
++K G VKWF+ G+GFI ++DVFVH I+ +KTLAEG++VEF+I +
Sbjct: 3 SSKKKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQGQG----FKTLAEGQSVEFEITE 58
Query: 258 GDKG 261
G KG
Sbjct: 59 GAKG 62
>gi|225459483|ref|XP_002285837.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
Length = 228
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWFS + G+GFIA ED+FVH I+ + ++TL+EGETVEF + G+ G
Sbjct: 9 GTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDG----FRTLSEGETVEFAVDHGEDGR 64
Query: 96 -EAINVT 101
+A+ VT
Sbjct: 65 TKAVEVT 71
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWFS + G+GFIA ED+FVH I+ + ++TL+EGETVEF + G+ G
Sbjct: 9 GTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDG----FRTLSEGETVEFAVDHGEDG 63
>gi|315659813|ref|ZP_07912672.1| cold-shock protein [Staphylococcus lugdunensis M23590]
gi|315495101|gb|EFU83437.1| cold-shock protein [Staphylococcus lugdunensis M23590]
Length = 82
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + G+GFI N DVFVH I YKTL EG+ VEFDI +G +G
Sbjct: 20 GTVKWFNAEKGFGFIEREDGN-DVFVHFSGIAGEG----YKTLEEGQKVEFDITEGQRGD 74
Query: 96 EAINV 100
+A NV
Sbjct: 75 QATNV 79
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + G+GFI N DVFVH I YKTL EG+ VEFDI +G +G+
Sbjct: 20 GTVKWFNAEKGFGFIEREDGN-DVFVHFSGIAGEG----YKTLEEGQKVEFDITEGQRGD 74
Query: 263 Q 263
Q
Sbjct: 75 Q 75
>gi|429083441|ref|ZP_19146482.1| Cold shock protein CspA [Cronobacter condimenti 1330]
gi|426547688|emb|CCJ72523.1| Cold shock protein CspA [Cronobacter condimenti 1330]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ + G+GFI + ++DVFVH I+ N +KTL EG+ V F +
Sbjct: 1 MSDKMTGLVKWFNAEKGFGFITPDNGSKDVFVHFSAIQNNG----FKTLEEGQKVSFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAANVT 68
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ + G+GFI + ++DVFVH I+ N +KTL EG+ V F +
Sbjct: 1 MSDKMTGLVKWFNAEKGFGFITPDNGSKDVFVHFSAIQNNG----FKTLEEGQKVSFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|421858640|ref|ZP_16290904.1| cold shock protein [Paenibacillus popilliae ATCC 14706]
gi|410831813|dbj|GAC41341.1| cold shock protein [Paenibacillus popilliae ATCC 14706]
Length = 65
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T N DVFVH I+ +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIETVEGN-DVFVHFSAIQSEG----FKTLEEGQEVEFDIVEGARGP 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QAANV 62
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T N DVFVH I+ +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIETVEGN-DVFVHFSAIQSEG----FKTLEEGQEVEFDIVEGARGP 57
Query: 263 QFCFVLK 269
Q V++
Sbjct: 58 QAANVIR 64
>gi|410086680|ref|ZP_11283388.1| Cold shock protein CspC [Morganella morganii SC01]
gi|455739674|ref|YP_007505940.1| Cold shock protein CspC [Morganella morganii subsp. morganii KT]
gi|409766900|gb|EKN50988.1| Cold shock protein CspC [Morganella morganii SC01]
gi|455421237|gb|AGG31567.1| Cold shock protein CspC [Morganella morganii subsp. morganii KT]
Length = 69
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
K+ G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF++ G
Sbjct: 3 KLKGTVKWFNESKGFGFITPADGSKDVFVHFSAIMTDG----FKTLAEGQQVEFEVQDGP 58
Query: 93 KGHEAINVT 101
KG A NVT
Sbjct: 59 KGPAAANVT 67
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 259
K+ G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF++ G
Sbjct: 3 KLKGTVKWFNESKGFGFITPADGSKDVFVHFSAIMTDG----FKTLAEGQQVEFEVQDGP 58
Query: 260 KG 261
KG
Sbjct: 59 KG 60
>gi|403387586|ref|ZP_10929643.1| cold shock protein [Clostridium sp. JC122]
Length = 65
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G VKWF+ + G+GF++ EDVFVH IK + YK+L EG+ VEFD+++G+K
Sbjct: 1 MIGTVKWFNAEKGFGFLSVEGE-EDVFVHFSSIKDDG----YKSLEEGQKVEFDVVEGEK 55
Query: 94 GHEAINV 100
G +A NV
Sbjct: 56 GPQATNV 62
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G VKWF+ + G+GF++ EDVFVH IK + YK+L EG+ VEFD+++G+K
Sbjct: 1 MIGTVKWFNAEKGFGFLSVEGE-EDVFVHFSSIKDDG----YKSLEEGQKVEFDVVEGEK 55
Query: 261 GNQ 263
G Q
Sbjct: 56 GPQ 58
>gi|334706143|ref|ZP_08522009.1| Cold shock-like protein cspI [Aeromonas caviae Ae398]
Length = 69
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VK+F+ + G+GFI+ ++DVFVH I+ N +KTL EG+ VEF I QG
Sbjct: 2 SKMTGTVKFFNAEKGFGFISPADGSKDVFVHFSAIQSNG----FKTLEEGQRVEFTIEQG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 QKGPAAANV 66
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VK+F+ + G+GFI+ ++DVFVH I+ N +KTL EG+ VEF I QG
Sbjct: 2 SKMTGTVKFFNAEKGFGFISPADGSKDVFVHFSAIQSNG----FKTLEEGQRVEFTIEQG 57
Query: 259 DKG 261
KG
Sbjct: 58 QKG 60
>gi|418760703|ref|ZP_13316856.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418764900|ref|ZP_13320993.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418772346|ref|ZP_13328350.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418775536|ref|ZP_13331494.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418778201|ref|ZP_13334114.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418783141|ref|ZP_13338989.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418800703|ref|ZP_13356351.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|419789461|ref|ZP_14315141.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419794293|ref|ZP_14319907.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392615036|gb|EIW97476.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392615246|gb|EIW97685.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392732460|gb|EIZ89671.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392741849|gb|EIZ98944.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392742255|gb|EIZ99345.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392748609|gb|EJA05595.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392756015|gb|EJA12914.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392757561|gb|EJA14447.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392783270|gb|EJA39895.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+ K+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTPKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 90 QGDKGHEAINVT 101
QG KG A+NV
Sbjct: 57 QGPKGPSAVNVV 68
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ K+ G+VKWF+ + G+GFI ++DVFVH I+ N ++TL E + VEF +
Sbjct: 1 MTPKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNE----FRTLNENQEVEFSVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGPKG 61
>gi|260598404|ref|YP_003210975.1| RNA chaperone/anti-terminator [Cronobacter turicensis z3032]
gi|429092446|ref|ZP_19155076.1| Cold shock protein CspA [Cronobacter dublinensis 1210]
gi|429104211|ref|ZP_19166185.1| Cold shock protein CspA [Cronobacter turicensis 564]
gi|260217581|emb|CBA31827.1| Cold shock protein cspA [Cronobacter turicensis z3032]
gi|426290860|emb|CCJ92298.1| Cold shock protein CspA [Cronobacter turicensis 564]
gi|426742804|emb|CCJ81189.1| Cold shock protein CspA [Cronobacter dublinensis 1210]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N +KTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPNDGSKDVFVHFSAIQSDN----FKTLDEGQQVSFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 NGAKGPAAGNVT 68
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ +N +KTL EG+ V F I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPNDGSKDVFVHFSAIQSDN----FKTLDEGQQVSFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|221504402|gb|EEE30077.1| glycine-rich protein, putative [Toxoplasma gondii VEG]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG- 94
G KWF K G+GFI T D+FVH IK ++ LAEGE+VEF + G G
Sbjct: 90 GHCKWFDSKKGFGFI-TAEDGTDLFVHQTEIKAQG----FRNLAEGESVEFRVQVGHDGK 144
Query: 95 HEAINVTGPDGRHVQG 110
+A++VTGP+G VQG
Sbjct: 145 RKAVSVTGPNGDFVQG 160
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G KWF K G+GFI T D+FVH IK ++ LAEGE+VEF + G G
Sbjct: 90 GHCKWFDSKKGFGFI-TAEDGTDLFVHQTEIKAQG----FRNLAEGESVEFRVQVGHDG 143
>gi|220931385|ref|YP_002508293.1| putative cold-shock DNA-binding domain-containing protein
[Halothermothrix orenii H 168]
gi|219992695|gb|ACL69298.1| putative cold-shock DNA-binding domain protein [Halothermothrix
orenii H 168]
Length = 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF K GYGFI +DVFVH I+ + +K+L +GE VEF+I++GD+G
Sbjct: 5 GKVKWFDAKKGYGFIER-EDGDDVFVHFSAIQADG----FKSLEDGEEVEFEIIEGDRGP 59
Query: 96 EAINV 100
+A NV
Sbjct: 60 QAANV 64
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF K GYGFI +DVFVH I+ + +K+L +GE VEF+I++GD+G
Sbjct: 5 GKVKWFDAKKGYGFIER-EDGDDVFVHFSAIQADG----FKSLEDGEEVEFEIIEGDRGP 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|441505286|ref|ZP_20987274.1| putative Cold shock-like protein [Photobacterium sp. AK15]
gi|441427141|gb|ELR64615.1| putative Cold shock-like protein [Photobacterium sp. AK15]
Length = 69
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K G+VKWF+ + G+GFI + DVFVH + I + +K+LAEG+ V FDI G
Sbjct: 2 SKATGIVKWFNDEKGFGFITQDNGGADVFVHFRAIAGDG----FKSLAEGQKVSFDIEDG 57
Query: 92 DKGHEAINV 100
KG +A NV
Sbjct: 58 QKGPQAANV 66
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K G+VKWF+ + G+GFI + DVFVH + I + +K+LAEG+ V FDI G
Sbjct: 2 SKATGIVKWFNDEKGFGFITQDNGGADVFVHFRAIAGDG----FKSLAEGQKVSFDIEDG 57
Query: 259 DKGNQ 263
KG Q
Sbjct: 58 QKGPQ 62
>gi|22003878|ref|NP_665832.1| protein lin-28 homolog A [Mus musculus]
gi|81914711|sp|Q8K3Y3.1|LN28A_MOUSE RecName: Full=Protein lin-28 homolog A; Short=Lin-28A; AltName:
Full=Testis-expressed protein 17
gi|21842298|gb|AAM77749.1|AF521097_1 RNA-binding protein LIN-28 [Mus musculus]
gi|148698092|gb|EDL30039.1| lin-28 homolog (C. elegans) [Mus musculus]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 22/117 (18%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSR 135
EGE VEF + KG E+I VTGP G GS+ RR N +KR+S+
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE---------RRPKGKNMQKRRSK 135
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|156936422|ref|YP_001440338.1| major cold shock protein [Cronobacter sakazakii ATCC BAA-894]
gi|389839254|ref|YP_006341338.1| cold shock-like protein CspA 1 [Cronobacter sakazakii ES15]
gi|417790610|ref|ZP_12438147.1| RNA chaperone/anti-terminator [Cronobacter sakazakii E899]
gi|424801434|ref|ZP_18226976.1| Cold shock protein CspA [Cronobacter sakazakii 696]
gi|429088480|ref|ZP_19151212.1| Cold shock protein CspA [Cronobacter universalis NCTC 9529]
gi|429091261|ref|ZP_19153943.1| Cold shock protein CspA [Cronobacter dublinensis 1210]
gi|429098324|ref|ZP_19160430.1| Cold shock protein CspA [Cronobacter dublinensis 582]
gi|429106481|ref|ZP_19168350.1| Cold shock protein CspA [Cronobacter malonaticus 681]
gi|429112001|ref|ZP_19173771.1| Cold shock protein CspA [Cronobacter malonaticus 507]
gi|429117180|ref|ZP_19178098.1| Cold shock protein CspA [Cronobacter sakazakii 701]
gi|429121765|ref|ZP_19182375.1| Cold shock protein CspA [Cronobacter sakazakii 680]
gi|449310477|ref|YP_007442833.1| RNA chaperone/anti-terminator [Cronobacter sakazakii SP291]
gi|156534676|gb|ABU79502.1| hypothetical protein ESA_04323 [Cronobacter sakazakii ATCC BAA-894]
gi|333955299|gb|EGL73064.1| RNA chaperone/anti-terminator [Cronobacter sakazakii E899]
gi|387849730|gb|AFJ97827.1| cold shock-like protein CspA 1 [Cronobacter sakazakii ES15]
gi|423237155|emb|CCK08846.1| Cold shock protein CspA [Cronobacter sakazakii 696]
gi|426284664|emb|CCJ86543.1| Cold shock protein CspA [Cronobacter dublinensis 582]
gi|426293204|emb|CCJ94463.1| Cold shock protein CspA [Cronobacter malonaticus 681]
gi|426313158|emb|CCJ99884.1| Cold shock protein CspA [Cronobacter malonaticus 507]
gi|426320309|emb|CCK04211.1| Cold shock protein CspA [Cronobacter sakazakii 701]
gi|426323759|emb|CCK13112.1| Cold shock protein CspA [Cronobacter sakazakii 680]
gi|426508283|emb|CCK16324.1| Cold shock protein CspA [Cronobacter universalis NCTC 9529]
gi|426744196|emb|CCJ80056.1| Cold shock protein CspA [Cronobacter dublinensis 1210]
gi|449100510|gb|AGE88544.1| RNA chaperone/anti-terminator [Cronobacter sakazakii SP291]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ + G+GFI + ++DVFVH I+ N +KTL EG+ V F +
Sbjct: 1 MSDKMTGLVKWFNAEKGFGFITPDNGSKDVFVHFSAIQNNG----FKTLEEGQKVSFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A NVT
Sbjct: 57 SGAKGPAAANVT 68
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ + G+GFI + ++DVFVH I+ N +KTL EG+ V F +
Sbjct: 1 MSDKMTGLVKWFNAEKGFGFITPDNGSKDVFVHFSAIQNNG----FKTLEEGQKVSFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 SGAKG 61
>gi|32490926|ref|NP_871180.1| cold shock protein CspE [Wigglesworthia glossinidia endosymbiont of
Glossina brevipalpis]
gi|379009830|ref|YP_005267643.1| DNA-binding transcriptional repressor [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
gi|25166132|dbj|BAC24323.1| cspE [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
gi|375158354|gb|AFA41420.1| DNA-binding transcriptional repressor [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
Length = 69
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 92 DKGHEAINVT 101
KG A +VT
Sbjct: 58 AKGPSAAHVT 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I+ N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNG----FKTLAEGQRVEFEITNG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|399519732|ref|ZP_10760523.1| cold-shock DNA-binding protein family protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112129|emb|CCH37082.1| cold-shock DNA-binding protein family protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 207
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 7 GTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI 66
GT+ + P ++ V + G VKWF+ G+GFI+ S +D+FVH + I
Sbjct: 111 GTQPRSADRRPPVQQASASTSVTQDDRETGTVKWFNTSKGFGFISR-DSGDDIFVHFRAI 169
Query: 67 KYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINV 100
+ ++ L EG+ VEF +MQ DKG +A +V
Sbjct: 170 RGEG----HRVLIEGQRVEFSVMQRDKGLQAEDV 199
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 174 GTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRI 233
GT+ + P ++ V + G VKWF+ G+GFI+ S +D+FVH + I
Sbjct: 111 GTQPRSADRRPPVQQASASTSVTQDDRETGTVKWFNTSKGFGFISR-DSGDDIFVHFRAI 169
Query: 234 KYNNPRKLYKTLAEGETVEFDIMQGDKGNQ 263
+ ++ L EG+ VEF +MQ DKG Q
Sbjct: 170 RGEG----HRVLIEGQRVEFSVMQRDKGLQ 195
>gi|225874667|ref|YP_002756126.1| cold shock protein [Acidobacterium capsulatum ATCC 51196]
gi|225793793|gb|ACO33883.1| cold shock protein [Acidobacterium capsulatum ATCC 51196]
Length = 87
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVVKWF+ GYGFI S+ EDVFVH I+ + YKTL EGE VEF+ QG KG
Sbjct: 24 GVVKWFNGAKGYGFI-QRSTGEDVFVHFSAIQDSG----YKTLNEGEAVEFECQQGPKGL 78
Query: 96 EAINVT 101
A NV
Sbjct: 79 NAANVV 84
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
GVVKWF+ GYGFI S+ EDVFVH I+ + YKTL EGE VEF+ QG KG
Sbjct: 24 GVVKWFNGAKGYGFI-QRSTGEDVFVHFSAIQDSG----YKTLNEGEAVEFECQQGPKG 77
>gi|386744398|ref|YP_006217577.1| cold shock protein CspE [Providencia stuartii MRSN 2154]
gi|384481091|gb|AFH94886.1| cold shock protein CspE [Providencia stuartii MRSN 2154]
Length = 69
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+KV G VKWF+ G+GFI ++DVFVH I +KTLAEG+ VEF+I +G
Sbjct: 2 SKVKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIASEG----FKTLAEGQKVEFEITEG 57
Query: 92 DKGHEAINVT 101
KG A+NV
Sbjct: 58 AKGPSAVNVV 67
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+KV G VKWF+ G+GFI ++DVFVH I +KTLAEG+ VEF+I +G
Sbjct: 2 SKVKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIASEG----FKTLAEGQKVEFEITEG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|223985451|ref|ZP_03635510.1| hypothetical protein HOLDEFILI_02816 [Holdemania filiformis DSM
12042]
gi|223962540|gb|EEF66993.1| hypothetical protein HOLDEFILI_02816 [Holdemania filiformis DSM
12042]
Length = 66
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
V G VKWF+ + GYGFI T +DVFVH I+ + +KTL +GE V F+++Q D+
Sbjct: 2 VTGKVKWFNAEKGYGFITT-DEGKDVFVHYSAIQTDG----FKTLDDGEAVSFEVVQSDR 56
Query: 94 GHEAINV 100
G +A NV
Sbjct: 57 GEQAANV 63
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
V G VKWF+ + GYGFI T +DVFVH I+ + +KTL +GE V F+++Q D+
Sbjct: 2 VTGKVKWFNAEKGYGFITT-DEGKDVFVHYSAIQTDG----FKTLDDGEAVSFEVVQSDR 56
Query: 261 GNQFCFVLK 269
G Q V K
Sbjct: 57 GEQAANVCK 65
>gi|221483569|gb|EEE21881.1| glycine-rich protein, putative [Toxoplasma gondii GT1]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG- 94
G KWF K G+GFI T D+FVH IK ++ LAEGE+VEF + G G
Sbjct: 90 GHCKWFDSKKGFGFI-TAEDGTDLFVHQTEIKAQG----FRNLAEGESVEFRVQVGHDGK 144
Query: 95 HEAINVTGPDGRHVQG 110
+A++VTGP+G VQG
Sbjct: 145 RKAVSVTGPNGDFVQG 160
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G KWF K G+GFI T D+FVH IK ++ LAEGE+VEF + G G
Sbjct: 90 GHCKWFDSKKGFGFI-TAEDGTDLFVHQTEIKAQG----FRNLAEGESVEFRVQVGHDG 143
>gi|148244980|ref|YP_001219674.1| cold shock protein [Candidatus Vesicomyosocius okutanii HA]
gi|146326807|dbj|BAF61950.1| cold shock protein [Candidatus Vesicomyosocius okutanii HA]
Length = 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF K G+GFI S DVFVH + I+ + YK+L EG+ VEFD+ G+KG
Sbjct: 4 TGKVKWFDAKKGFGFIEQESGG-DVFVHFRAIQGDG----YKSLEEGQEVEFDLEDGEKG 58
Query: 95 HEAINV 100
+A+NV
Sbjct: 59 PQAVNV 64
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF K G+GFI S DVFVH + I+ + YK+L EG+ VEFD+ G+KG
Sbjct: 4 TGKVKWFDAKKGFGFIEQESGG-DVFVHFRAIQGDG----YKSLEEGQEVEFDLEDGEKG 58
Query: 262 NQ 263
Q
Sbjct: 59 PQ 60
>gi|293345051|ref|XP_002725926.1| PREDICTED: protein lin-28 homolog B isoform 2 [Rattus norvegicus]
gi|293356926|ref|XP_002729027.1| PREDICTED: protein lin-28 homolog B isoform 3 [Rattus norvegicus]
Length = 247
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 36 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
G KWF+V+ G+GFI+ S DVFVH ++ +++L EGE VEF
Sbjct: 30 GHCKWFNVRMGFGFISMISREGNPLDIPVDVFVHQSKLFMEG----FRSLKEGEPVEFTF 85
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
+ KG E+I VTGP G GS+ +RK KA++
Sbjct: 86 KKSPKGLESIRVTGPGGNPCLGSERRPKGKTLQKRKPKADR 126
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
G KWF+V+ G+GFI+ S DVFVH ++ +++L EGE VEF
Sbjct: 30 GHCKWFNVRMGFGFISMISREGNPLDIPVDVFVHQSKLFMEG----FRSLKEGEPVEFTF 85
Query: 256 MQGDKG 261
+ KG
Sbjct: 86 KKSPKG 91
>gi|212712933|ref|ZP_03321061.1| hypothetical protein PROVALCAL_04031 [Providencia alcalifaciens DSM
30120]
gi|212684411|gb|EEB43939.1| hypothetical protein PROVALCAL_04031 [Providencia alcalifaciens DSM
30120]
Length = 81
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
L +KV G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF+I
Sbjct: 12 LMSKVKGNVKWFNESKGFGFITPEDGSKDVFVHFSAISGDG----FKTLAEGQKVEFEIT 67
Query: 90 QGDKGHEAINVT 101
+G KG A NV
Sbjct: 68 EGAKGPSAANVV 79
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
L +KV G VKWF+ G+GFI ++DVFVH I + +KTLAEG+ VEF+I
Sbjct: 12 LMSKVKGNVKWFNESKGFGFITPEDGSKDVFVHFSAISGDG----FKTLAEGQKVEFEIT 67
Query: 257 QGDKG 261
+G KG
Sbjct: 68 EGAKG 72
>gi|39995688|ref|NP_951639.1| cold shock DNA/RNA-binding protein [Geobacter sulfurreducens PCA]
gi|409911135|ref|YP_006889600.1| cold shock DNA/RNA-binding protein [Geobacter sulfurreducens KN400]
gi|39982452|gb|AAR33912.1| cold shock DNA/RNA-binding protein [Geobacter sulfurreducens PCA]
gi|298504699|gb|ADI83422.1| cold shock DNA/RNA-binding protein [Geobacter sulfurreducens KN400]
Length = 66
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
GVVKWF+ GYGFI + EDVFVH I+ + +KTL EG+ V FD++QG KG
Sbjct: 4 GVVKWFNDSKGYGFIEQ-ENGEDVFVHFSSIQGDG----FKTLVEGQAVTFDVVQGAKGL 58
Query: 96 EAINV 100
+A NV
Sbjct: 59 QAANV 63
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
GVVKWF+ GYGFI + EDVFVH I+ + +KTL EG+ V FD++QG KG
Sbjct: 4 GVVKWFNDSKGYGFIEQ-ENGEDVFVHFSSIQGDG----FKTLVEGQAVTFDVVQGAKGL 58
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 59 QAANVMK 65
>gi|330447207|ref|ZP_08310857.1| cold shock protein CspG [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491398|dbj|GAA05354.1| cold shock protein CspG [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K G+VKWF+ + G+GF+ + DVFVH + I +KTL EG+ V FD+
Sbjct: 1 MSNKTLGLVKWFNEEKGFGFLTQNNGGADVFVHFRAIASEG----FKTLTEGQKVSFDVE 56
Query: 90 QGDKGHEAINV 100
QG KG +A NV
Sbjct: 57 QGQKGLQAANV 67
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K G+VKWF+ + G+GF+ + DVFVH + I +KTL EG+ V FD+
Sbjct: 1 MSNKTLGLVKWFNEEKGFGFLTQNNGGADVFVHFRAIASEG----FKTLTEGQKVSFDVE 56
Query: 257 QGDKGNQ 263
QG KG Q
Sbjct: 57 QGQKGLQ 63
>gi|300676082|gb|ADK26463.1| lin-28 [Sus scrofa]
Length = 205
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 6 SGTKAEATPSNPSANESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 58
+G A+A P +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 59 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKP 118
V VH ++ +++L EGE VEF + KG E+I VTGP G GS+
Sbjct: 68 VLVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE------ 117
Query: 119 KYNRRKAKANKRKRKSR 135
RR N +KR+S+
Sbjct: 118 ---RRPKGKNMQKRRSK 131
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 173 SGTKAEATPSNPSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------D 225
+G A+A P + +EP +L G+ KWF+V+ G+GF++ + D
Sbjct: 10 AGGCAKAPEEAPEDAARAAEEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVD 67
Query: 226 VFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
V VH ++ +++L EGE VEF + KG
Sbjct: 68 VLVHQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 99
>gi|300718875|ref|YP_003743678.1| cold-shock protein [Erwinia billingiae Eb661]
gi|299064711|emb|CAX61831.1| Cold-shock DNA-binding protein family [Erwinia billingiae Eb661]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFISPEDGSKDVFVHFSAIQSND----FKTLDEGQKVEFTIE 56
Query: 90 QGDKGHEAINVT 101
G KG A NV
Sbjct: 57 NGAKGPSAGNVV 68
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ N+ +KTL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFISPEDGSKDVFVHFSAIQSND----FKTLDEGQKVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|46329818|gb|AAH68304.1| Lin-28 homolog (C. elegans) [Mus musculus]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 22/117 (18%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANKRKRKSR 135
EGE VEF + KG E+I VTGP G GS+ RR N +KR+S+
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSE---------RRPKGKNMQKRRSK 135
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 193 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 245
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 246 AEGETVEFDIMQGDKG 261
EGE VEF + KG
Sbjct: 88 KEGEAVEFTFKKSAKG 103
>gi|395498066|ref|ZP_10429645.1| cold-shock DNA-binding domain-containing protein [Pseudomonas sp.
PAMC 25886]
Length = 88
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
G VKWF+ GYGF+ ED+F H I+ + YKTL G+ V F+I+QG K
Sbjct: 4 ASGKVKWFNNAKGYGFVVEDGKEEDLFAHYSAIQMDG----YKTLKAGQAVSFEIIQGPK 59
Query: 94 GHEAINVTGP 103
G A+N+ P
Sbjct: 60 GLHAVNIGAP 69
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
G VKWF+ GYGF+ ED+F H I+ + YKTL G+ V F+I+QG K
Sbjct: 4 ASGKVKWFNNAKGYGFVVEDGKEEDLFAHYSAIQMDG----YKTLKAGQAVSFEIIQGPK 59
Query: 261 G 261
G
Sbjct: 60 G 60
>gi|357008127|ref|ZP_09073126.1| CspB [Paenibacillus elgii B69]
Length = 65
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI +DVFVH I+ + +KTL EG+ VEF+I+QG++G
Sbjct: 3 GTVKWFNAEKGYGFIQV-EGGDDVFVHFSAIQGDG----FKTLEEGQAVEFEIVQGNRGP 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QAANV 62
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI +DVFVH I+ + +KTL EG+ VEF+I+QG++G
Sbjct: 3 GTVKWFNAEKGYGFIQV-EGGDDVFVHFSAIQGDG----FKTLEEGQAVEFEIVQGNRGP 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|153953338|ref|YP_001394103.1| CspA protein [Clostridium kluyveri DSM 555]
gi|219853967|ref|YP_002471089.1| hypothetical protein CKR_0624 [Clostridium kluyveri NBRC 12016]
gi|146346219|gb|EDK32755.1| CspA [Clostridium kluyveri DSM 555]
gi|219567691|dbj|BAH05675.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 67
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
G VKWF+ + G+GFI P N DVFVH I+ N R K L EG+ V+FD+ +G KG
Sbjct: 3 TGTVKWFNSEKGFGFIEVPGEN-DVFVHFTAIQSNEAR---KNLEEGQKVQFDVEEGPKG 58
Query: 95 HEAINVT 101
+A NV
Sbjct: 59 LQAANVV 65
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G VKWF+ + G+GFI P N DVFVH I+ N R K L EG+ V+FD+ +G KG
Sbjct: 3 TGTVKWFNSEKGFGFIEVPGEN-DVFVHFTAIQSNEAR---KNLEEGQKVQFDVEEGPKG 58
Query: 262 NQFCFVLK 269
Q V+K
Sbjct: 59 LQAANVVK 66
>gi|238790450|ref|ZP_04634220.1| Cold shock-like protein cspE [Yersinia frederiksenii ATCC 33641]
gi|238721476|gb|EEQ13146.1| Cold shock-like protein cspE [Yersinia frederiksenii ATCC 33641]
Length = 69
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNEAKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFEITTG 57
Query: 92 DKGHEAINV 100
KG A NV
Sbjct: 58 AKGPSAANV 66
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+K+ G VKWF+ G+GFI ++DVFVH I N +KTLAEG+ VEF+I G
Sbjct: 2 SKIKGSVKWFNEAKGFGFITPEDGSKDVFVHFSAIASNG----FKTLAEGQRVEFEITTG 57
Query: 259 DKG 261
KG
Sbjct: 58 AKG 60
>gi|443710784|gb|ELU04857.1| hypothetical protein CAPTEDRAFT_121832, partial [Capitella teleta]
Length = 70
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 42/55 (76%)
Query: 69 NNPRKLYKTLAEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRR 123
NNP K +++ +GE VEFD+++ +KG++A NVTGP+G VQGS++AA++ + R
Sbjct: 7 NNPHKYLRSVGDGEKVEFDVVKAEKGNQAANVTGPEGESVQGSKYAADRRHFRPR 61
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 236 NNPRKLYKTLAEGETVEFDIMQGDKGNQFCFV 267
NNP K +++ +GE VEFD+++ +KGNQ V
Sbjct: 7 NNPHKYLRSVGDGEKVEFDVVKAEKGNQAANV 38
>gi|375310911|ref|ZP_09776175.1| cold-shock DNA-binding domain protein [Paenibacillus sp. Aloe-11]
gi|390457190|ref|ZP_10242718.1| cold shock cspc [Paenibacillus peoriae KCTC 3763]
gi|375077109|gb|EHS55353.1| cold-shock DNA-binding domain protein [Paenibacillus sp. Aloe-11]
Length = 65
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI T + DVFVH I+ +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIET-AEGGDVFVHFSAIQTEG----FKTLEEGQDVEFDIVEGARGP 57
Query: 96 EAINVT 101
+A NVT
Sbjct: 58 QAANVT 63
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI T + DVFVH I+ +KTL EG+ VEFDI++G +G
Sbjct: 3 GKVKWFNAEKGYGFIET-AEGGDVFVHFSAIQTEG----FKTLEEGQDVEFDIVEGARGP 57
Query: 263 QFCFVLK 269
Q V K
Sbjct: 58 QAANVTK 64
>gi|117926184|ref|YP_866801.1| cold-shock DNA-binding protein family protein [Magnetococcus
marinus MC-1]
gi|117609940|gb|ABK45395.1| cold-shock DNA-binding protein family [Magnetococcus marinus MC-1]
Length = 71
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
+A ++ G VKWF+ G+GFIA + ++DVF H I + +K+L EG+ VEF++
Sbjct: 1 MADRITGTVKWFNNDKGFGFIAPDNGSKDVFAHFSEISSGSG---FKSLEEGQKVEFNVE 57
Query: 90 QGDKGHEAINVT 101
GDKG +A+ +T
Sbjct: 58 PGDKGPKAVKIT 69
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+A ++ G VKWF+ G+GFIA + ++DVF H I + +K+L EG+ VEF++
Sbjct: 1 MADRITGTVKWFNNDKGFGFIAPDNGSKDVFAHFSEISSGSG---FKSLEEGQKVEFNVE 57
Query: 257 QGDKG 261
GDKG
Sbjct: 58 PGDKG 62
>gi|294637324|ref|ZP_06715621.1| conserved domain protein [Edwardsiella tarda ATCC 23685]
gi|451965378|ref|ZP_21918637.1| putative cold shock-like protein [Edwardsiella tarda NBRC 105688]
gi|291089507|gb|EFE22068.1| conserved domain protein [Edwardsiella tarda ATCC 23685]
gi|451315824|dbj|GAC63999.1| putative cold shock-like protein [Edwardsiella tarda NBRC 105688]
Length = 71
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI+ ++DVFVH I+ N ++TL EG+ VEF +
Sbjct: 1 MSNKMTGSVKWFNADKGFGFISPADGSKDVFVHFSAIQSNE----FRTLDEGQKVEFSVE 56
Query: 90 QGDKGHEAINVT 101
G KG A+NV
Sbjct: 57 NGPKGPSAVNVV 68
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI+ ++DVFVH I+ N ++TL EG+ VEF +
Sbjct: 1 MSNKMTGSVKWFNADKGFGFISPADGSKDVFVHFSAIQSNE----FRTLDEGQKVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGPKG 61
>gi|237841239|ref|XP_002369917.1| glycine-rich protein 2, putative [Toxoplasma gondii ME49]
gi|211967581|gb|EEB02777.1| glycine-rich protein 2, putative [Toxoplasma gondii ME49]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG- 94
G KWF K G+GFI T D+FVH IK ++ LAEGE+VEF + G G
Sbjct: 90 GHCKWFDSKKGFGFI-TAEDGTDLFVHQTEIKAQG----FRNLAEGESVEFRVQVGHDGK 144
Query: 95 HEAINVTGPDGRHVQG 110
+A++VTGP+G VQG
Sbjct: 145 RKAVSVTGPNGDFVQG 160
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
G KWF K G+GFI T D+FVH IK ++ LAEGE+VEF + G G
Sbjct: 90 GHCKWFDSKKGFGFI-TAEDGTDLFVHQTEIKAQG----FRNLAEGESVEFRVQVGHDG 143
>gi|41055233|ref|NP_957385.1| protein lin-28 homolog A [Danio rerio]
gi|82241857|sp|Q803L0.1|LN28A_DANRE RecName: Full=Protein lin-28 homolog A; Short=Lin-28A
gi|27882510|gb|AAH44433.1| Lin-28 homolog (C. elegans) [Danio rerio]
Length = 202
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Query: 36 GVVKWFSVKSGYGFIATP-------SSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 88
GV KWF+V+ G+GF++ S DVFVH ++ +++L EGE VEF
Sbjct: 36 GVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 91
Query: 89 MQGDKGHEAINVTGPDGRHVQGSQFAANKPK-YNRRKAKANK 129
+ KG E++ VTGP G GS+ KPK +R++K ++
Sbjct: 92 KRSSKGLESLQVTGPGGAPCVGSE---KKPKGTQKRRSKGDR 130
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 203 GVVKWFSVKSGYGFIATP-------SSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDI 255
GV KWF+V+ G+GF++ S DVFVH ++ +++L EGE VEF
Sbjct: 36 GVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 91
Query: 256 MQGDKG 261
+ KG
Sbjct: 92 KRSSKG 97
>gi|375088739|ref|ZP_09735077.1| hypothetical protein HMPREF9703_01159 [Dolosigranulum pigrum ATCC
51524]
gi|374561704|gb|EHR33043.1| hypothetical protein HMPREF9703_01159 [Dolosigranulum pigrum ATCC
51524]
Length = 71
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF GYGFI S++ED+FVH I ++ +K+L +G+TVEF+I +G +G
Sbjct: 4 GIVKWFDAGKGYGFIE--SNHEDIFVHFTGIN----QEGFKSLNDGQTVEFNIAEGPRGK 57
Query: 96 EAINVTGPDGRHVQ 109
+A +VT + H Q
Sbjct: 58 QATDVTIIETDHSQ 71
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G+VKWF GYGFI S++ED+FVH I ++ +K+L +G+TVEF+I +G +G
Sbjct: 4 GIVKWFDAGKGYGFIE--SNHEDIFVHFTGIN----QEGFKSLNDGQTVEFNIAEGPRGK 57
Query: 263 Q 263
Q
Sbjct: 58 Q 58
>gi|291399525|ref|XP_002716148.1| PREDICTED: lin-28 homolog [Oryctolagus cuniculus]
gi|291409216|ref|XP_002720890.1| PREDICTED: lin-28 homolog [Oryctolagus cuniculus]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 26 EPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFVHSKRIKYNNPRKLYKTL 78
EP +L G+ KWF+V+ G+GF++ + DVFVH ++ +++L
Sbjct: 34 EPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSL 87
Query: 79 AEGETVEFDIMQGDKGHEAINVTGPDGRHVQGSQFAANKPKYNRRKAKANK 129
EGE VEF + KG E+I VTGP G GS+ +R++K ++
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRPKGKSMQKRRSKGDR 138
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 177 AEATPSN-PSASESPKKEPVVLATKVCGVVKWFSVKSGYGFIATPSSNE-------DVFV 228
AE P P + EP +L G+ KWF+V+ G+GF++ + DVFV
Sbjct: 17 AEKAPEEAPEDAARAADEPQLLHGA--GICKWFNVRMGFGFLSMTARAGVALDPPVDVFV 74
Query: 229 HSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
H ++ +++L EGE VEF + KG
Sbjct: 75 HQSKLHMEG----FRSLKEGEAVEFTFKKSAKG 103
>gi|358063765|ref|ZP_09150367.1| hypothetical protein HMPREF9473_02430 [Clostridium hathewayi
WAL-18680]
gi|356698013|gb|EHI59571.1| hypothetical protein HMPREF9473_02430 [Clostridium hathewayi
WAL-18680]
Length = 67
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI+ S DVFVH + + +K+L EG TVEFD+ G KG
Sbjct: 4 GTVKWFNNQKGYGFISDESGT-DVFVHYSGLAMDG----FKSLEEGATVEFDVTDGAKGP 58
Query: 96 EAINVT 101
+AINVT
Sbjct: 59 QAINVT 64
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI+ S DVFVH + + +K+L EG TVEFD+ G KG
Sbjct: 4 GTVKWFNNQKGYGFISDESGT-DVFVHYSGLAMDG----FKSLEEGATVEFDVTDGAKGP 58
Query: 263 Q 263
Q
Sbjct: 59 Q 59
>gi|428672476|gb|EKX73390.1| cold shock protein, putative [Babesia equi]
Length = 102
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 33 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGD 92
+ G KWF K GYGFI T + EDVFVH I N +++L E E VE D++ +
Sbjct: 3 RTAGKCKWFDPKKGYGFI-TLDNGEDVFVHQSEIHANG----FRSLREEERVELDVVLEN 57
Query: 93 KGHEAINVTGPDGRHVQGSQ 112
+AI VTGP G +V+G++
Sbjct: 58 NKKKAIRVTGPRGDYVRGAE 77
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 200 KVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
+ G KWF K GYGFI T + EDVFVH I N +++L E E VE D++
Sbjct: 3 RTAGKCKWFDPKKGYGFI-TLDNGEDVFVHQSEIHANG----FRSLREEERVELDVV 54
>gi|398796689|ref|ZP_10556176.1| cold shock protein [Pantoea sp. YR343]
gi|398799366|ref|ZP_10558657.1| cold shock protein [Pantoea sp. GM01]
gi|398098782|gb|EJL89062.1| cold shock protein [Pantoea sp. GM01]
gi|398202691|gb|EJM89530.1| cold shock protein [Pantoea sp. YR343]
Length = 70
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ + G+GFI+ + ++DVFVH I+ + Y++L EG+ VEF +
Sbjct: 1 MSNKILGTVKWFNSEKGFGFISPENGSKDVFVHFSAIQGTD----YRSLDEGQRVEFSVE 56
Query: 90 QGDKGHEAINVTG 102
G KG A NV G
Sbjct: 57 DGPKGPSATNVLG 69
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ + G+GFI+ + ++DVFVH I+ + Y++L EG+ VEF +
Sbjct: 1 MSNKILGTVKWFNSEKGFGFISPENGSKDVFVHFSAIQGTD----YRSLDEGQRVEFSVE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 DGPKG 61
>gi|386390235|ref|ZP_10075029.1| cold-shock DNA-binding domain protein [Haemophilus
paraphrohaemolyticus HK411]
gi|385693545|gb|EIG24186.1| cold-shock DNA-binding domain protein [Haemophilus
paraphrohaemolyticus HK411]
Length = 70
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 32 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 91
+ + G VKWF+ G+GFIA ED+FVH I+ N Y+TL EG V++++ +
Sbjct: 2 SALIGTVKWFNATKGFGFIAPEQGGEDIFVHFSAIENNGG---YRTLEEGAKVQYEVQKS 58
Query: 92 DKGHEAINV 100
D+G A+NV
Sbjct: 59 DRGLSAVNV 67
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 199 TKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQG 258
+ + G VKWF+ G+GFIA ED+FVH I+ N Y+TL EG V++++ +
Sbjct: 2 SALIGTVKWFNATKGFGFIAPEQGGEDIFVHFSAIENNGG---YRTLEEGAKVQYEVQKS 58
Query: 259 DKG 261
D+G
Sbjct: 59 DRG 61
>gi|261346879|ref|ZP_05974523.1| conserved domain protein [Providencia rustigianii DSM 4541]
gi|282565065|gb|EFB70600.1| conserved domain protein [Providencia rustigianii DSM 4541]
Length = 70
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ +N ++TL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFISPTDGSKDVFVHFSAIQSDN----FRTLDEGQKVEFTIE 56
Query: 90 QGDKGHEAINV 100
G KG A NV
Sbjct: 57 NGAKGPAAANV 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI+ ++DVFVH I+ +N ++TL EG+ VEF I
Sbjct: 1 MSNKMTGLVKWFNSDKGFGFISPTDGSKDVFVHFSAIQSDN----FRTLDEGQKVEFTIE 56
Query: 257 QGDKG 261
G KG
Sbjct: 57 NGAKG 61
>gi|50121583|ref|YP_050750.1| cold shock-like protein [Pectobacterium atrosepticum SCRI1043]
gi|49612109|emb|CAG75559.1| cold shock-like protein [Pectobacterium atrosepticum SCRI1043]
Length = 73
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ G+GFI +D+F H I+ + Y+TL G+ V FD+ +G KGN
Sbjct: 4 GTVKWFNNAKGFGFICPEGGGDDIFAHYSTIQMDG----YRTLKAGQVVRFDVHEGPKGN 59
Query: 263 QFCFVLKNIV 272
C ++ IV
Sbjct: 60 HACLIVPQIV 69
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ G+GFI +D+F H I+ + Y+TL G+ V FD+ +G KG+
Sbjct: 4 GTVKWFNNAKGFGFICPEGGGDDIFAHYSTIQMDG----YRTLKAGQVVRFDVHEGPKGN 59
Query: 96 EA 97
A
Sbjct: 60 HA 61
>gi|289423507|ref|ZP_06425308.1| conserved domain protein [Peptostreptococcus anaerobius 653-L]
gi|429728820|ref|ZP_19263523.1| major cold shock protein CspA [Peptostreptococcus anaerobius VPI
4330]
gi|289156009|gb|EFD04673.1| conserved domain protein [Peptostreptococcus anaerobius 653-L]
gi|429147504|gb|EKX90529.1| major cold shock protein CspA [Peptostreptococcus anaerobius VPI
4330]
Length = 66
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 35 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 94
GVVKWF+ + G+GFI+ N DVFVH I+ + YK+L EG+ VEF+I+ G KG
Sbjct: 3 VGVVKWFNNEKGFGFISVDGEN-DVFVHFSAIQGDG----YKSLEEGQQVEFEIVDGSKG 57
Query: 95 HEAINVT 101
+A NVT
Sbjct: 58 PQAANVT 64
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Query: 202 CGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKG 261
GVVKWF+ + G+GFI+ N DVFVH I+ + YK+L EG+ VEF+I+ G KG
Sbjct: 3 VGVVKWFNNEKGFGFISVDGEN-DVFVHFSAIQGDG----YKSLEEGQQVEFEIVDGSKG 57
Query: 262 NQ 263
Q
Sbjct: 58 PQ 59
>gi|238758372|ref|ZP_04619550.1| Cold shock-like protein cspI [Yersinia aldovae ATCC 35236]
gi|238703495|gb|EEP96034.1| Cold shock-like protein cspI [Yersinia aldovae ATCC 35236]
Length = 66
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 34 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 93
+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I G K
Sbjct: 1 MTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIESGAK 56
Query: 94 GHEAINVT 101
G A+NV
Sbjct: 57 GPSAVNVV 64
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 201 VCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDK 260
+ G+VKWF G+GFI ++DVFVH I+ N+ +KTL EG+ VEF I G K
Sbjct: 1 MTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSND----FKTLDEGQKVEFSIESGAK 56
Query: 261 G 261
G
Sbjct: 57 G 57
>gi|429000608|ref|ZP_19069050.1| cold shock-like protein CspG [Escherichia coli 95.0183]
gi|427268720|gb|EKW33812.1| cold shock-like protein CspG [Escherichia coli 95.0183]
Length = 70
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N ++TL E + VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56
Query: 90 QGDKGHEAINV 100
QG +G A NV
Sbjct: 57 QGQRGSAAANV 67
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G+VKWF+ G+GFI ++DVFVH I+ N ++TL E + VEF I
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56
Query: 257 QGDKG 261
QG +G
Sbjct: 57 QGQRG 61
>gi|392381088|ref|YP_005030285.1| putative cold-shock protein [Azospirillum brasilense Sp245]
gi|356876053|emb|CCC96805.1| putative cold-shock protein [Azospirillum brasilense Sp245]
Length = 258
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 31 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 90
AT+ G VKWF+ G+GFIA +DVFVH K ++ R + L +G+ V + Q
Sbjct: 190 ATQTEGTVKWFNATKGFGFIAQDGGGQDVFVHIKAVE----RSGLQGLNDGQRVRISVRQ 245
Query: 91 GDKGHEAINV 100
GDKG EA++V
Sbjct: 246 GDKGPEAVSV 255
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 198 ATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQ 257
AT+ G VKWF+ G+GFIA +DVFVH K ++ R + L +G+ V + Q
Sbjct: 190 ATQTEGTVKWFNATKGFGFIAQDGGGQDVFVHIKAVE----RSGLQGLNDGQRVRISVRQ 245
Query: 258 GDKG 261
GDKG
Sbjct: 246 GDKG 249
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 192 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 251
++PVVL T+V VKW+ G+GF+ + D + + + +++L +G TV
Sbjct: 12 RQPVVLGTQVQATVKWYDPNRGFGFVKFEDGSPDALIPAAIVATAG----HESLPDGATV 67
Query: 252 EFDIMQGDKGNQ 263
DI++G KGNQ
Sbjct: 68 VVDIVEGRKGNQ 79
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 25 KEPVVLATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETV 84
++PVVL T+V VKW+ G+GF+ + D + + + +++L +G TV
Sbjct: 12 RQPVVLGTQVQATVKWYDPNRGFGFVKFEDGSPDALIPAAIVATAG----HESLPDGATV 67
Query: 85 EFDIMQGDKGHE 96
DI++G KG++
Sbjct: 68 VVDIVEGRKGNQ 79
>gi|251796131|ref|YP_003010862.1| cold-shock protein [Paenibacillus sp. JDR-2]
gi|247543757|gb|ACT00776.1| cold-shock DNA-binding domain protein [Paenibacillus sp. JDR-2]
Length = 65
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ + GYGFI+ + EDVFVH I+ + +K L EG++VEF+I QG++G
Sbjct: 3 GTVKWFNAEKGYGFISVENG-EDVFVHYSSIQGDG----FKALEEGQSVEFEITQGNRGA 57
Query: 96 EAINV 100
+A NV
Sbjct: 58 QASNV 62
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ + GYGFI+ + EDVFVH I+ + +K L EG++VEF+I QG++G
Sbjct: 3 GTVKWFNAEKGYGFISVENG-EDVFVHYSSIQGDG----FKALEEGQSVEFEITQGNRGA 57
Query: 263 QFCFVLK 269
Q V+K
Sbjct: 58 QASNVIK 64
>gi|89073826|ref|ZP_01160333.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
gi|90581460|ref|ZP_01237254.1| putative Cold shock-like protein [Photobacterium angustum S14]
gi|89050361|gb|EAR55862.1| putative Cold shock-like protein [Photobacterium sp. SKA34]
gi|90437321|gb|EAS62518.1| putative Cold shock-like protein [Photobacterium angustum S14]
Length = 67
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++ QG KG
Sbjct: 4 GIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFEVEQGQKGL 59
Query: 96 EAINVTG 102
+A NV
Sbjct: 60 QAANVVA 66
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G+VKWF+ + G+GFI + DVFVH + I +KTLAEG+ V F++ QG KG
Sbjct: 4 GIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEG----FKTLAEGQKVSFEVEQGQKGL 59
Query: 263 Q 263
Q
Sbjct: 60 Q 60
>gi|392542869|ref|ZP_10290006.1| cold-shock DNA-binding domain-containing protein [Pseudoalteromonas
piscicida JCM 20779]
Length = 70
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 30 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 89
++ K+ G VKWF+ G+GFI + + DVFVH K I + +KTL EG+ V FD+
Sbjct: 1 MSNKILGSVKWFNELKGFGFITPENGSPDVFVHFKSI----VSEGFKTLNEGQKVAFDVE 56
Query: 90 QGDKGHEAINVT 101
QG KG A NVT
Sbjct: 57 QGAKGPNAANVT 68
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 197 LATKVCGVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIM 256
++ K+ G VKWF+ G+GFI + + DVFVH K I + +KTL EG+ V FD+
Sbjct: 1 MSNKILGSVKWFNELKGFGFITPENGSPDVFVHFKSI----VSEGFKTLNEGQKVAFDVE 56
Query: 257 QGDKG 261
QG KG
Sbjct: 57 QGAKG 61
>gi|390959339|ref|YP_006423096.1| cold shock protein [Terriglobus roseus DSM 18391]
gi|390414257|gb|AFL89761.1| cold shock protein [Terriglobus roseus DSM 18391]
Length = 73
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 36 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGH 95
G VKWF+ GYGF+ DVFVH I+ + YK+L EG+ VEFD++QG KG
Sbjct: 6 GTVKWFNNAKGYGFLGRDDGGADVFVHYSSIQLDG----YKSLKEGDPVEFDVIQGSKGP 61
Query: 96 EA 97
+A
Sbjct: 62 QA 63
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 203 GVVKWFSVKSGYGFIATPSSNEDVFVHSKRIKYNNPRKLYKTLAEGETVEFDIMQGDKGN 262
G VKWF+ GYGF+ DVFVH I+ + YK+L EG+ VEFD++QG KG
Sbjct: 6 GTVKWFNNAKGYGFLGRDDGGADVFVHYSSIQLDG----YKSLKEGDPVEFDVIQGSKGP 61
Query: 263 Q 263
Q
Sbjct: 62 Q 62
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,532,075,117
Number of Sequences: 23463169
Number of extensions: 185678222
Number of successful extensions: 519100
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3217
Number of HSP's successfully gapped in prelim test: 4128
Number of HSP's that attempted gapping in prelim test: 497289
Number of HSP's gapped (non-prelim): 15480
length of query: 282
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 141
effective length of database: 9,050,888,538
effective search space: 1276175283858
effective search space used: 1276175283858
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)