Query psy5474
Match_columns 138
No_of_seqs 210 out of 1512
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 18:29:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5474.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5474hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.7 2.9E-17 1E-21 129.9 7.7 82 56-137 31-115 (510)
2 2lnl_A C-X-C chemokine recepto 99.6 1E-15 3.5E-20 112.5 9.4 78 56-137 10-87 (296)
3 2ks9_A Substance-P receptor; w 99.6 2.2E-15 7.7E-20 113.3 10.2 78 58-137 33-110 (364)
4 2rh1_A Beta-2-adrenergic recep 99.6 1.1E-15 3.7E-20 120.5 6.6 80 56-137 39-118 (500)
5 1u19_A Rhodopsin; G protein-co 99.6 1.2E-14 4.2E-19 108.3 9.5 80 56-137 37-116 (349)
6 3uon_A Human M2 muscarinic ace 99.6 4E-15 1.4E-19 115.0 6.7 80 56-137 22-101 (467)
7 3odu_A C-X-C chemokine recepto 99.5 8.5E-15 2.9E-19 114.2 7.7 80 54-137 45-124 (502)
8 3pbl_A D(3) dopamine receptor, 99.5 7.2E-15 2.5E-19 114.1 5.1 81 56-137 37-117 (481)
9 4ea3_A Fusion protein of nocic 99.5 1.8E-14 6.2E-19 111.4 6.3 80 55-137 123-202 (434)
10 4dkl_A MU-type opioid receptor 99.5 4.2E-14 1.4E-18 109.1 7.8 79 56-137 16-94 (464)
11 3rze_A Histamine H1 receptor, 99.5 1.6E-14 5.4E-19 111.2 4.7 80 56-137 7-86 (452)
12 3vw7_A Proteinase-activated re 99.5 3.2E-14 1.1E-18 110.5 5.9 80 56-137 19-98 (484)
13 3v2y_A Sphingosine 1-phosphate 99.5 4.2E-14 1.4E-18 112.0 5.9 77 58-137 64-140 (520)
14 3eml_A Human adenosine A2A rec 99.4 8E-14 2.7E-18 108.1 6.2 78 56-137 20-97 (488)
15 2z73_A Rhodopsin; visual pigme 99.4 1.3E-13 4.5E-18 106.7 6.9 80 56-137 33-113 (448)
16 4amj_A Beta-1 adrenergic recep 99.4 4.5E-14 1.5E-18 103.5 3.5 80 56-137 10-89 (315)
17 4eiy_A Adenosine receptor A2A/ 99.4 1.5E-13 5.1E-18 105.6 6.2 78 56-137 30-107 (447)
18 3sn6_R Lysozyme, beta-2 adrene 99.4 1.1E-13 3.8E-18 109.2 5.4 80 56-137 181-260 (514)
19 2lot_A Apelin receptor; membra 97.5 1.2E-05 4.2E-10 46.3 -0.6 30 59-88 30-59 (64)
20 3arc_I Photosystem II reaction 26.1 68 0.0023 15.8 2.7 16 60-75 11-26 (38)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.69 E-value=2.9e-17 Score=129.93 Aligned_cols=82 Identities=17% Similarity=0.353 Sum_probs=70.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCC---chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMR---NSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMW 132 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~---~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C 132 (138)
.++++.++|.+++++|++||++|++++.++|++| +++|+|++|||++|++++++.+|+.+.++....+.|.||+.+|
T Consensus 31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C 110 (510)
T 4grv_A 31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGC 110 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHH
Confidence 4567888999999999999999999998877554 7899999999999999999999999887766667899999999
Q ss_pred ccccc
Q psy5474 133 KMAEM 137 (138)
Q Consensus 133 ~~~~~ 137 (138)
++..|
T Consensus 111 ~~~~~ 115 (510)
T 4grv_A 111 RGYYF 115 (510)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 2
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.63 E-value=1e-15 Score=112.53 Aligned_cols=78 Identities=27% Similarity=0.493 Sum_probs=68.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
.+.+..++|.+++++|++||++|++++.++|++|+++|+|+.|||++|+++++. +|....... ..|.+|+..|++.
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~-~p~~~~~~~---~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPIWAASKV---NGWIFGTFLCKVV 85 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHH-HHHHHHHHH---SSSCCSSHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHh-hhHHHhhcc---CCCccchhHHHHH
Confidence 566788999999999999999999999999999999999999999999998765 777665443 3699999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.+
T Consensus 86 ~~ 87 (296)
T 2lnl_A 86 SL 87 (296)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 3
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.62 E-value=2.2e-15 Score=113.28 Aligned_cols=78 Identities=27% Similarity=0.387 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccccc
Q psy5474 58 TPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMAEM 137 (138)
Q Consensus 58 ~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~~~ 137 (138)
.++.+++.+++++|++||+++++++.++|++|+++|+|+.|||++|++.++..+|..+.+... +.|.+|+..|++..+
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~--~~~~~~~~~C~~~~~ 110 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVH--NEWYYGLFYCKFHNF 110 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH--TSCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCccchHHHHHhHHH
Confidence 445888999999999999999999999999999999999999999999988888988776543 579999999998754
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.60 E-value=1.1e-15 Score=120.45 Aligned_cols=80 Identities=24% Similarity=0.339 Sum_probs=72.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
...++.+++.+++++|++||+++++++.++|++|+++|+|+.|||++|++++++.+|+.+.+... +.|.+|+..|++.
T Consensus 39 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~--~~w~~~~~~C~~~ 116 (500)
T 2rh1_A 39 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILM--KMWTFGNFWCEFW 116 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH--TSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcCCcchhhHH
Confidence 55677889999999999999999999999999999999999999999999999889998876654 5899999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.|
T Consensus 117 ~~ 118 (500)
T 2rh1_A 117 TS 118 (500)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 5
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.56 E-value=1.2e-14 Score=108.26 Aligned_cols=80 Identities=19% Similarity=0.254 Sum_probs=70.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
...++.+++.+++++|++||+++++++.++|++|++.|+++.|||++|++.++..+|..+..... +.|.+|+..|++.
T Consensus 37 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~--~~~~~~~~~C~~~ 114 (349)
T 1u19_A 37 QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLH--GYFVFGPTGCNLE 114 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH--TSCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhc--CeeeCChhHHHHH
Confidence 45577888999999999999999999999999999999999999999999999888988765543 5799999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.+
T Consensus 115 ~~ 116 (349)
T 1u19_A 115 GF 116 (349)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 6
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.56 E-value=4e-15 Score=115.00 Aligned_cols=80 Identities=18% Similarity=0.279 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
...++.+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++.+|..+..... +.|.+|+..|++.
T Consensus 22 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~--~~~~~~~~~C~~~ 99 (467)
T 3uon_A 22 EVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVI--GYWPLGPVVCDLW 99 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHS--SSCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCccCCcchHhHH
Confidence 45678899999999999999999999999999999999999999999999999889998876644 5899999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.|
T Consensus 100 ~~ 101 (467)
T 3uon_A 100 LA 101 (467)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 7
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.55 E-value=8.5e-15 Score=114.23 Aligned_cols=80 Identities=26% Similarity=0.455 Sum_probs=70.8
Q ss_pred cchhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccc
Q psy5474 54 AYIRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWK 133 (138)
Q Consensus 54 ~~~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~ 133 (138)
...+.++.+++.+++++|++||++|++++.+++++|+++|+|+.|||++|++++ +.+|+.+..... .|.+|+..|+
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~---~~~~~~~~C~ 120 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA---NWYFGNFLCK 120 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT---CCCSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc---CCcCCchhhh
Confidence 336678899999999999999999999999999999999999999999999995 568998876643 6999999999
Q ss_pred cccc
Q psy5474 134 MAEM 137 (138)
Q Consensus 134 ~~~~ 137 (138)
+..|
T Consensus 121 ~~~~ 124 (502)
T 3odu_A 121 AVHV 124 (502)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 8765
No 8
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.52 E-value=7.2e-15 Score=114.08 Aligned_cols=81 Identities=20% Similarity=0.290 Sum_probs=69.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
.+.++.+++.+++++|++||+++++++.++|++|+++|+|+.|||++|++++++.+|..+..... .+.|.+|...|++.
T Consensus 37 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~-~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 37 PHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVT-GGVWNFSRICCDVF 115 (481)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHT-TSCCCSCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCccccCcchhhhH
Confidence 34566788899999999999999999999999999999999999999999998889988876543 36899999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.|
T Consensus 116 ~~ 117 (481)
T 3pbl_A 116 VT 117 (481)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 9
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.51 E-value=1.8e-14 Score=111.42 Aligned_cols=80 Identities=29% Similarity=0.468 Sum_probs=70.4
Q ss_pred chhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc
Q psy5474 55 YIRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKM 134 (138)
Q Consensus 55 ~~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~ 134 (138)
..+..+.+++.+++++|++||+++++++.++|++|+++|+|+.|||++|++. ++.+|+.+..... +.|.+|...|++
T Consensus 123 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~--~~~~~~~~~C~~ 199 (434)
T 4ea3_A 123 GLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILL--GFWPFGNALCKT 199 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHH--TSCTTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHh--cCCcCcccHHHH
Confidence 3667788899999999999999999999999999999999999999999998 5568988876654 469999999998
Q ss_pred ccc
Q psy5474 135 AEM 137 (138)
Q Consensus 135 ~~~ 137 (138)
..|
T Consensus 200 ~~~ 202 (434)
T 4ea3_A 200 VIA 202 (434)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 10
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.50 E-value=4.2e-14 Score=109.06 Aligned_cols=79 Identities=30% Similarity=0.515 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
.+.++.+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++ +|+.+..... +.|.+|...|++.
T Consensus 16 ~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~--~~~~~~~~~C~~~ 92 (464)
T 4dkl_A 16 TAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLM--GTWPFGNILCKIV 92 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH--SSCCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh--CCcccccchhhhH
Confidence 567888999999999999999999999999999999999999999999998877 8988876654 4799999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.|
T Consensus 93 ~~ 94 (464)
T 4dkl_A 93 IS 94 (464)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 11
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.49 E-value=1.6e-14 Score=111.23 Aligned_cols=80 Identities=23% Similarity=0.348 Sum_probs=70.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
...++.+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++.+|..+.+... +.|.+|+..|++.
T Consensus 7 ~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~--~~~~~~~~~C~~~ 84 (452)
T 3rze_A 7 QLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLM--SKWSLGRPLCLFW 84 (452)
T ss_dssp --CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHS--SSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCccCCchhHhHH
Confidence 34467788999999999999999999999999999999999999999999998889999887654 5899999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.|
T Consensus 85 ~~ 86 (452)
T 3rze_A 85 LS 86 (452)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 12
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.48 E-value=3.2e-14 Score=110.50 Aligned_cols=80 Identities=15% Similarity=0.311 Sum_probs=69.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
.+.++.+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++ +|..+.... ..+.|.+|+..|++.
T Consensus 19 ~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~-~~~~~~~~~~~C~~~ 96 (484)
T 3vw7_A 19 LTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYF-SGSDWQFGSELCRFV 96 (484)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHH-TTSCCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-hcCCcccchhHHhHH
Confidence 567889999999999999999999999999999999999999999999999765 666555443 335899999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.|
T Consensus 97 ~~ 98 (484)
T 3vw7_A 97 TA 98 (484)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 13
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.47 E-value=4.2e-14 Score=112.00 Aligned_cols=77 Identities=26% Similarity=0.432 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccccc
Q psy5474 58 TPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMAEM 137 (138)
Q Consensus 58 ~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~~~ 137 (138)
.++.+++.+++++|++||++|++++.++|++|+++|+|+.|||++|++++++..|..+.. ....|.+|...|++..|
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~---~~~~~~~~~~~c~~~~~ 140 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS---GATTYKLTPAQWFLREG 140 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS---GGGGTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc---cccceeeCccccchHHH
Confidence 678899999999999999999999999999999999999999999999999988887754 33589999999997654
No 14
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.45 E-value=8e-14 Score=108.09 Aligned_cols=78 Identities=19% Similarity=0.278 Sum_probs=69.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
...++.+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++.+|+.+... ..|.+|...|++.
T Consensus 20 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~----~~~~~~~~~C~~~ 95 (488)
T 3eml_A 20 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS----TGFCAACHGCLFI 95 (488)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT----TCCEECHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh----ccccccchHHHHH
Confidence 456788999999999999999999999999999999999999999999999998899887643 2699999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.|
T Consensus 96 ~~ 97 (488)
T 3eml_A 96 AC 97 (488)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 15
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.44 E-value=1.3e-13 Score=106.67 Aligned_cols=80 Identities=24% Similarity=0.364 Sum_probs=69.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVC-TPTVLVEVNSKPETWQMGEHMWKM 134 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~-~P~~~~~~~~~~~~w~~g~~~C~~ 134 (138)
....+.+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++. +|..+.... .+.|.+|+..|++
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~--~~~~~~~~~~C~~ 110 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCF--LKKWIFGFAACKV 110 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHH--TTSCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHh--cCCccCCHHHHHH
Confidence 4566788899999999999999999999999999999999999999999998874 788877654 3589999999998
Q ss_pred ccc
Q psy5474 135 AEM 137 (138)
Q Consensus 135 ~~~ 137 (138)
..+
T Consensus 111 ~~~ 113 (448)
T 2z73_A 111 YGF 113 (448)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 16
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.43 E-value=4.5e-14 Score=103.53 Aligned_cols=80 Identities=25% Similarity=0.380 Sum_probs=71.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
.+....+++.+++++|++||+++++++.++|++|++.|+++.|||++|++.++..+|..+..... +.|.+|+..|++.
T Consensus 10 ~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~--~~~~~~~~~C~~~ 87 (315)
T 4amj_A 10 WEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVR--GTWLWGSFLCELW 87 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH--SSCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhc--CCeeccccHHHHH
Confidence 45677889999999999999999999999999999999999999999999988788988876543 5899999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.+
T Consensus 88 ~~ 89 (315)
T 4amj_A 88 TS 89 (315)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.43 E-value=1.5e-13 Score=105.60 Aligned_cols=78 Identities=19% Similarity=0.278 Sum_probs=69.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
...+..+++.+++++|++||+++++++.++|++|+++|+|+.|||++|+++++..+|..+... ..|.+|...|++.
T Consensus 30 ~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~----~~~~~~~~~C~~~ 105 (447)
T 4eiy_A 30 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS----TGFCAACHGCLFI 105 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH----TTCEEEHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cccccCccHHHHH
Confidence 456788899999999999999999999999999999999999999999999988899887643 2688899999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.|
T Consensus 106 ~~ 107 (447)
T 4eiy_A 106 AC 107 (447)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.42 E-value=1.1e-13 Score=109.18 Aligned_cols=80 Identities=25% Similarity=0.364 Sum_probs=72.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhHHhhhHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy5474 56 IRTPSMVLCSIILCIGVLGNIMVPCVILKSKDMRNSTNIFLMNLSIADLMVLLVCTPTVLVEVNSKPETWQMGEHMWKMA 135 (138)
Q Consensus 56 ~~~~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l~~~~~~fl~nLa~aDl~~~~~~~P~~~~~~~~~~~~w~~g~~~C~~~ 135 (138)
....+.+++.+++++|++||+++++++.++|++|++.|+|++|||++|++++++.+|..+..... +.|.+|+..|++.
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~--~~~~~~~~~C~~~ 258 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILT--KTWTFGNFWCEFW 258 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH--TSCCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHc--CCeeCCcchhhhH
Confidence 55678889999999999999999999999999999999999999999999998889998876654 5899999999987
Q ss_pred cc
Q psy5474 136 EM 137 (138)
Q Consensus 136 ~~ 137 (138)
.|
T Consensus 259 ~~ 260 (514)
T 3sn6_R 259 TS 260 (514)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 19
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=97.46 E-value=1.2e-05 Score=46.33 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhhhHHhhhHhhcCCCC
Q psy5474 59 PSMVLCSIILCIGVLGNIMVPCVILKSKDM 88 (138)
Q Consensus 59 ~~~~~~~~i~~~g~~GN~lvl~~i~~~~~l 88 (138)
+++++|.+++++|++||++|++++.++|.-
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 678999999999999999999998887753
No 20
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=26.10 E-value=68 Score=15.85 Aligned_cols=16 Identities=13% Similarity=0.436 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHhhh
Q psy5474 60 SMVLCSIILCIGVLGN 75 (138)
Q Consensus 60 ~~~~~~~i~~~g~~GN 75 (138)
..+++..+++.|.+.|
T Consensus 11 vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 11 VVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccccCC
Confidence 3455666666676655
Done!