BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5485
(384 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y2Z0|SUGT1_HUMAN Suppressor of G2 allele of SKP1 homolog OS=Homo sapiens GN=SUGT1
PE=1 SV=3
Length = 365
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 121/196 (61%), Gaps = 16/196 (8%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
I+++WYQTE QVV+ +IK + V + + +V L S + L L L PI
Sbjct: 172 IKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKL--PSGEDYNLKLELLHPII 229
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKAPSA----------PKTPYKRDWDK 310
P S+F++L TKIE+KL K RW LE + + P +PY R+WDK
Sbjct: 230 PEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDK 289
Query: 311 VA----QQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLESGGTVLSTNWDEVKR 366
+ ++ ++EK EG+AALN LFQ+IY +GSDEV++AMNKSF+ESGGTVLSTNW +V +
Sbjct: 290 LVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGK 349
Query: 367 STVDIKPPEGLEYKKW 382
V+I PP+ +E+KK+
Sbjct: 350 RKVEINPPDDMEWKKY 365
>sp|Q2KIK0|SUGT1_BOVIN Suppressor of G2 allele of SKP1 homolog OS=Bos taurus GN=SUGT1 PE=2
SV=1
Length = 338
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 121/196 (61%), Gaps = 16/196 (8%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
I+++WYQTE QV++ +IK + V + + +V L S + L L L PI
Sbjct: 145 IKYDWYQTESQVIITLMIKNVQKNDVNVEFSEKELSALVKL--PSGDDYSLKLRLLHPII 202
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKAPSA----------PKTPYKRDWDK 310
P S+F++L TKIE+K+ K RW LE + + P + Y R+WDK
Sbjct: 203 PEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDVPNPKPFIADVKNLYPSSSHYTRNWDK 262
Query: 311 VA----QQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLESGGTVLSTNWDEVKR 366
+ ++ ++EK EG+AALN+LFQ+IY +GSDEV++AMNKSF+ESGGTVLSTNW +V +
Sbjct: 263 LVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGK 322
Query: 367 STVDIKPPEGLEYKKW 382
V+I PP+ +E+KK+
Sbjct: 323 RKVEINPPDDMEWKKY 338
>sp|B0BN85|SUGT1_RAT Suppressor of G2 allele of SKP1 homolog OS=Rattus norvegicus
GN=Sugt1 PE=2 SV=1
Length = 336
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 123/200 (61%), Gaps = 16/200 (8%)
Query: 197 TVQNIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLY 256
T I+++WYQTE V++ +IK + +V+ + + VV + S L L L
Sbjct: 139 TQSKIKYDWYQTESHVIITLMIKNVQKNDVRVDFSEKELSAVVKI--PSGEDCSLKLRLL 196
Query: 257 RPIDPTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKAPSA----------PKTPYKR 306
PI P S+F++L TKIE+K+ K RW LE + + AP + Y R
Sbjct: 197 HPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDVPAPKQFTADVKNMYPSSSHYTR 256
Query: 307 DWDKVA----QQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLESGGTVLSTNWD 362
+WDK+ ++ ++EK EG+AALN+LFQ+IY +GSDEV++AMNKSF+ESGGTVLSTNW
Sbjct: 257 NWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWS 316
Query: 363 EVKRSTVDIKPPEGLEYKKW 382
+V + V+I PP+ +E+K++
Sbjct: 317 DVGKRKVEINPPDDMEWKQY 336
>sp|Q9CX34|SUGT1_MOUSE Suppressor of G2 allele of SKP1 homolog OS=Mus musculus GN=Sugt1
PE=2 SV=3
Length = 336
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 122/200 (61%), Gaps = 16/200 (8%)
Query: 197 TVQNIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLY 256
T I+++WYQTE V++ +IK + +V + + +V + + + L L L
Sbjct: 139 TQSKIKYDWYQTESHVIITLMIKSVQKNDVRVGFSERELSALVKI--PAGEDYSLKLRLL 196
Query: 257 RPIDPTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKAPSA----------PKTPYKR 306
PI P S+F++L TKIE+K+ K RW LE + + P + Y R
Sbjct: 197 HPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDEPTPKQFTADVKNMYPSSSHYTR 256
Query: 307 DWDKVA----QQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLESGGTVLSTNWD 362
+WDK+ ++ ++EK EG+AALN+LFQ+IY +GSDEV++AMNKSF+ESGGTVLSTNW
Sbjct: 257 NWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWS 316
Query: 363 EVKRSTVDIKPPEGLEYKKW 382
+V + V+I PP+ +E+K++
Sbjct: 317 DVGKRKVEINPPDDMEWKQY 336
>sp|Q55ED0|SUGT1_DICDI Protein SUGT1 homolog OS=Dictyostelium discoideum GN=sugt1 PE=2
SV=1
Length = 387
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 124/203 (61%), Gaps = 17/203 (8%)
Query: 194 PTPTVQN-IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLH 252
P P+ N +RH WYQTE VV+ K A +++N+ SV+I L ++ ++
Sbjct: 188 PIPSSGNKVRHEWYQTETHVVLTIFAKFVTASNSKINLTSKSVNISFPL--ANGSEFLFE 245
Query: 253 LNLYRPIDPTTSSFRILGTKIEVKLAKTSDERWSDLEAKEET----------KAPSAPKT 302
++L+ PI S+ TK+E+K+ K+ +W LE +++ +P+ P +
Sbjct: 246 MDLFDPIVDKDSTIHYYSTKVEIKMKKSRAIKWDTLEFTDKSGPVGLMDQISSSPAVP-S 304
Query: 303 PY--KRDWDKVAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLESGGTVLSTN 360
PY K+DWDK+ + E EK EG+ ALN++F+ I+ +GS++ ++AM KSF ESGGTVLSTN
Sbjct: 305 PYASKKDWDKLPNEPE-EKLEGDQALNKIFRDIFSKGSEDQQRAMMKSFTESGGTVLSTN 363
Query: 361 WDEVKRSTVDIKPPEGLEYKKWD 383
WDEV V +PP+GLE+K+++
Sbjct: 364 WDEVGSKKVVGEPPKGLEFKQYE 386
>sp|Q9SUR9|SGT1A_ARATH Protein SGT1 homolog A OS=Arabidopsis thaliana GN=SGT1A PE=1 SV=1
Length = 350
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 119/216 (55%), Gaps = 24/216 (11%)
Query: 189 TAPPPP----TPTVQNIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPS 244
TAPP TPT + RH +YQ ++VVV K + VNID + V ++
Sbjct: 137 TAPPVSELDVTPTAK-YRHEYYQKPEEVVVTVFAKGIPKQN--VNIDFGEQILSVVIEVP 193
Query: 245 SSTQHRLHLNLYRPIDPTTSSFRILGTKIEVKLAKTSDERWSDLE-------------AK 291
+ L L+ I P + +L TKIE+ LAK W+ LE +
Sbjct: 194 GEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKADIITWASLEHGKGPAVLPKPNVSS 253
Query: 292 EETKAPSAPKTPYKRDWDK----VAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNK 347
E ++ P+ P + +DWDK V +Q +DEK EG+AALN+ F++IY +++R+AM+K
Sbjct: 254 EVSQRPAYPSSKKVKDWDKLEAEVKKQEKDEKLEGDAALNKFFREIYQNADEDMRRAMSK 313
Query: 348 SFLESGGTVLSTNWDEVKRSTVDIKPPEGLEYKKWD 383
SF+ES GTVLSTNW EV T++ PP+G+E KKW+
Sbjct: 314 SFVESNGTVLSTNWQEVGTKTIESTPPDGMELKKWE 349
>sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B OS=Arabidopsis thaliana GN=SGT1B PE=1 SV=1
Length = 358
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 106/200 (53%), Gaps = 19/200 (9%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH +YQ ++ VV K+ E V + + +V+ D + + L L+ I
Sbjct: 160 FRHEFYQKPEEAVVTIFAKKVPKENVTVEFGEQILSVVI--DVAGEEAYHLQPRLFGKII 217
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLE-------------AKEETKAPSAPKTPYKRD 307
P F +L TK+E++LAK W+ LE + ++ P P + +D
Sbjct: 218 PEKCRFEVLSTKVEIRLAKAEIITWASLEYGKGQSVLPKPNVSSALSQRPVYPSSKPAKD 277
Query: 308 WDK----VAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLESGGTVLSTNWDE 363
WDK V +Q +DEK +G+AA+N+ F IY +++R+AMNKSF ES GTVLSTNW E
Sbjct: 278 WDKLEAEVKKQEKDEKLDGDAAMNKFFSDIYSSADEDMRRAMNKSFAESNGTVLSTNWKE 337
Query: 364 VKRSTVDIKPPEGLEYKKWD 383
V V+ PP+G+E KKW+
Sbjct: 338 VGTKKVESTPPDGMELKKWE 357
>sp|Q0JL44|SGT1_ORYSJ Protein SGT1 homolog OS=Oryza sativa subsp. japonica GN=SGT1 PE=1
SV=1
Length = 367
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 192 PPPTPTVQNIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRL 251
PP RH++Y + +VV+ K AE V+ + + + + + P H
Sbjct: 159 PPMVEVKPKYRHDFYNSATEVVLTIFAKGVPAENVVVDFGEQMLSVSIEV-PGEEPYH-F 216
Query: 252 HLNLYRPIDPTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKA--------------P 297
L+ I P S +++L TK+E++LAK W+ L+ ++ KA P
Sbjct: 217 QPRLFSKIIPEKSRYQVLSTKVEIRLAKAEQITWTSLDYDKKPKAVPQKIIPPAESAQRP 276
Query: 298 SAPKTPYKRDWDKVAQQIEDEKKE----GEAALNELFQKIYGEGSDEVRKAMNKSFLESG 353
S P + K+DWDK+ +++ E+KE G+AALN+ F+ IY + +++R+AM KSF+ES
Sbjct: 277 SYPSSKSKKDWDKLEAEVKKEEKEEKLEGDAALNKFFRDIYSDADEDMRRAMMKSFVESN 336
Query: 354 GTVLSTNWDEVKRSTVDIKPPEGLEYKKWD 383
GTVLSTNW +V V+ PP+G+E KKW+
Sbjct: 337 GTVLSTNWKDVGSKKVEGSPPDGMELKKWE 366
>sp|O59709|GIT7_SCHPO Glucose-insensitive transcription protein 7 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=git7 PE=4 SV=2
Length = 379
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 16/197 (8%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
IR++W QT + +D K+ K E + +++N++ I + L+ S L LY I
Sbjct: 184 IRYDWSQTSFSLNIDIYAKKVKDEDVSLLMEKNTLKIEIKLEDGSIFSLVLD-PLYEEIV 242
Query: 261 PTTSSFRILGTKIEVKLAK-TSDERWSDL-----------EAKEETKAPSAPKTPYK-RD 307
P SSF++ +K+E+ L K S+ +W L AK+ + ++ T K +D
Sbjct: 243 PEKSSFKLFSSKVEITLIKKVSEIKWEALVKSPANNSVNVYAKDSNHSSASGNTKNKAKD 302
Query: 308 WDKVAQ--QIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLESGGTVLSTNWDEVK 365
WD +A+ +E+++ GEAAL LFQ +Y D+ R+AM KS+ ES GT LSTNW +VK
Sbjct: 303 WDSLAKLADLEEDEPTGEAALANLFQNLYKNADDDTRRAMMKSYTESNGTALSTNWKDVK 362
Query: 366 RSTVDIKPPEGLEYKKW 382
T + KPP+G+E KK+
Sbjct: 363 SKTFETKPPQGMEPKKF 379
>sp|Q08446|SGT1_YEAST Protein SGT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SGT1 PE=1 SV=1
Length = 395
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 39/213 (18%)
Query: 204 NWYQTEKQVVVDALIKQAKAETTQVNI-----DQNSVDIVVTLDPSSSTQHRLHLNLYRP 258
+WYQ+ V + QVNI D+ ++ I + P S ++ + + L
Sbjct: 188 DWYQSSTSVTISLFTVNLPESKEQVNIYISPNDRRTLSISYQV-PKSGSEFQYNAKLSHE 246
Query: 259 IDPTTSSFRILGTKIEVKLAKTSDERWSDLE----------------------------- 289
+DP S +I K+E+ L+K +W LE
Sbjct: 247 VDPKAVSLKIFPKKLEITLSKIDSTQWKKLEEDILTESSRLSDEGKNSDSATRLLSAETA 306
Query: 290 AKEETKAPSAPKTPYKRDWDKVAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSF 349
+KE PS+ K K DW K+ I++E E + + FQK+Y + ++AM KSF
Sbjct: 307 SKERLSYPSSSKK--KIDWSKL--DIDEEADEEAGSADSFFQKLYAGADPDTKRAMMKSF 362
Query: 350 LESGGTVLSTNWDEVKRSTVDIKPPEGLEYKKW 382
+ES GT LST+W++V + TV PPEG+E K W
Sbjct: 363 IESNGTALSTDWEDVSKGTVKTSPPEGMEPKHW 395
>sp|Q6NUA0|CHRD1_XENLA Cysteine and histidine-rich domain-containing protein 1 OS=Xenopus
laevis GN=chordc1 PE=2 SV=1
Length = 334
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH+W+QT V + K + E + V + V+I V + + Q ++ L+ ID
Sbjct: 229 CRHDWHQTGAGVTISIYAKNSMPELSYVEANSTVVNIQVVFEGEKTFQQ--NVQLWGVID 286
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKAPS 298
S + TK+EV L K W+ LE ++ APS
Sbjct: 287 VAKSYVSLTATKVEVFLKKAEFMTWARLELPQKAPAPS 324
>sp|Q7T3F7|CHRD1_DANRE Cysteine and histidine-rich domain-containing protein 1 OS=Danio
rerio GN=chordc1 PE=2 SV=1
Length = 341
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 198 VQNIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYR 257
V R +W+QT QV++ K + E + V + + I + + + ++L+
Sbjct: 225 VVPCRFDWHQTGSQVIISIYAKNSVPELSLVEGNSTVLKIHIIFE--GEKEFEKQISLWG 282
Query: 258 PIDPTTSSFRILGTKIEVKLAKTSDERWSDLE 289
IDP+ S ++ TKIE+ L K W+ L+
Sbjct: 283 VIDPSKSLVNMMATKIEIVLKKAEPMSWARLD 314
>sp|D4A4T9|CHRD1_RAT Cysteine and histidine-rich domain-containing protein 1 OS=Rattus
norvegicus GN=Chordc1 PE=3 SV=1
Length = 331
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH+W+QT +V + K + E +QV + +++ + + + ++ L+ ID
Sbjct: 230 CRHDWHQTGGEVTISVYAKNSLPELSQVEANSTLLNVHIVFE--GEKEFHQNVKLWGVID 287
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLE 289
S + TKIE+ + K +W+ LE
Sbjct: 288 VKRSYVTMTATKIEITMRKAEPMQWASLE 316
>sp|Q9D1P4|CHRD1_MOUSE Cysteine and histidine-rich domain-containing protein 1 OS=Mus
musculus GN=Chordc1 PE=1 SV=1
Length = 331
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH+W+QT +V + K + E +QV + +++ + + + ++ L+ ID
Sbjct: 230 CRHDWHQTGGEVTISVYAKNSLPELSQVEANSTLLNVHIVFE--GEKEFHQNVKLWGVID 287
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLE 289
S + TKIE+ + K +W+ LE
Sbjct: 288 VKRSYVTMTATKIEITMRKAEPMQWASLE 316
>sp|Q29RL2|CHRD1_BOVIN Cysteine and histidine-rich domain-containing protein 1 OS=Bos
taurus GN=CHORDC1 PE=2 SV=1
Length = 332
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH+W+QT +V + K + E +QV + +++ + + + ++ L+ ID
Sbjct: 230 CRHDWHQTGGEVTISVYAKNSLPELSQVVANSTLLNVHIVFE--GEKEFHQNVKLWGVID 287
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLE 289
S + TKIE+ + K +W+ LE
Sbjct: 288 VKRSYVTMTATKIEITMRKAEPMQWASLE 316
>sp|A9YUB1|CHRD1_PIG Cysteine and histidine-rich domain-containing protein 1 OS=Sus
scrofa GN=CHORDC1 PE=2 SV=1
Length = 332
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH+W+QT +V + K + E +QV + +++ + + + ++ L+ ID
Sbjct: 230 CRHDWHQTGGEVTISVYAKNSLPELSQVVANSTLLNVHIVFE--GEKEFHQNVKLWGVID 287
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLE 289
S + TKIE+ + K +W+ LE
Sbjct: 288 VKRSYVTMTATKIEITMRKAEPMQWASLE 316
>sp|Q9VCC0|CHRD1_DROME Cysteine and histidine-rich domain-containing protein OS=Drosophila
melanogaster GN=CHORD PE=1 SV=1
Length = 354
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 198 VQNIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYR 257
V R++W+QT VV+ K+ + + ++ + + + + + L L L
Sbjct: 210 VVQCRYDWHQTATNVVMAIYAKKYDYSQSVIELNPIRLHVNLVFPEQDNARFDLDLELRG 269
Query: 258 PIDPTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKTPYKRDWDKVAQQIED 317
++ + +S + GTK+E+KL K WS+L + K P K+ Q+E+
Sbjct: 270 IVNVSNASAHMYGTKVEIKLPKLEPGSWSNLNFPNK-KLPVVKKS-----------QVEE 317
Query: 318 EKKEGEA 324
+KK+ E+
Sbjct: 318 KKKQEES 324
>sp|Q5RD91|CHRD1_PONAB Cysteine and histidine-rich domain-containing protein 1 OS=Pongo
abelii GN=CHORDC1 PE=2 SV=1
Length = 332
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH+W+QT +V + K + E ++V + +++ + + + ++ L+ ID
Sbjct: 230 CRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFE--GEKEFEQNVKLWGVID 287
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKTPYKRD 307
S + TKIE+ + K +W+ LE P+A K ++D
Sbjct: 288 VKRSYVTMTATKIEITMRKAEPMQWASLE------LPAAKKQEKQKD 328
>sp|Q3T168|CYBP_BOVIN Calcyclin-binding protein OS=Bos taurus GN=CACYBP PE=2 SV=1
Length = 230
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 187 AGTAPPPPTPTVQNIRHNWYQTEKQVVVDAL---IKQAKAETTQVNIDQNSVDIVVTLDP 243
A AP TV+ + W Q++K V + + Q AE+ QVN + S D++V +
Sbjct: 64 AVVAPITTGYTVKISNYGWDQSDKFVKIYITLPGVHQVPAESVQVNFTERSFDLLVK-NL 122
Query: 244 SSSTQHRLHLNLYRPIDPTTSSFRI-LGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKT 302
+ + + NL +PI SS ++ T + + K + RW L T+ K
Sbjct: 123 NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYL-----TQVEKECKE 177
Query: 303 PYKRDWDKVAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLES 352
K +D E + EG L + +KIY +G D++++ +NK+++ES
Sbjct: 178 KEKPSYD-----TETDPSEG---LMNVLKKIYEDGDDDMKRTINKAWVES 219
>sp|Q4R7U2|CHRD1_MACFA Cysteine and histidine-rich domain-containing protein 1 OS=Macaca
fascicularis GN=CHORDC1 PE=2 SV=1
Length = 332
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH+W+QT +V + K + E ++V + +++ + + + ++ L+ ID
Sbjct: 230 CRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFE--GEKEFDQNVKLWGVID 287
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKTPYKRD 307
S + TKIE+ + K +W+ LE P+A K ++D
Sbjct: 288 VKRSYVTMTATKIEINMRKAEPMQWASLE------LPAAKKQEKQKD 328
>sp|Q9UHD1|CHRD1_HUMAN Cysteine and histidine-rich domain-containing protein 1 OS=Homo
sapiens GN=CHORDC1 PE=1 SV=2
Length = 332
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH+W+QT +V + K + E ++V + +++ + + + ++ L+ ID
Sbjct: 230 CRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFE--GEKEFDQNVKLWGVID 287
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKTPYKRD 307
S + TKIE+ + K +W+ LE P+A K ++D
Sbjct: 288 VKRSYVTMTATKIEITMRKAEPMQWASLE------LPAAKKQEKQKD 328
>sp|Q5ZML4|CHRD1_CHICK Cysteine and histidine-rich domain-containing protein 1 OS=Gallus
gallus GN=CHORDC1 PE=2 SV=1
Length = 331
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPID 260
RH+W+QT +V V K + + + V + ++I + + HR ++ L+ ID
Sbjct: 230 CRHDWHQTGGEVTVSIYAKNSVPDLSYVEANSTMLNIHIVFE-GEKEFHR-NVKLWGVID 287
Query: 261 PTTSSFRILGTKIEVKLAKTSDERWSDLE 289
S + TKIEV + K W+ LE
Sbjct: 288 VKRSYVNMTATKIEVSMRKAEPLLWASLE 316
>sp|Q9UKP3|ITBP2_HUMAN Integrin beta-1-binding protein 2 OS=Homo sapiens GN=ITGB1BP2 PE=2
SV=1
Length = 347
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 200 NIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPI 259
+ RH+W+QT+ VVV + V Q + + + D + Q ++ L+ I
Sbjct: 217 SCRHDWHQTDSLVVVTVYGQIPLPAFNWVKASQTELHVHIVFDGNRVFQAQM--KLWGVI 274
Query: 260 DPTTSSFRILGTKIEVKLAKTSDERWSDLE 289
+ SS ++ +++E+ L K W+ LE
Sbjct: 275 NVEQSSVFLMPSRVEISLVKADPGSWAQLE 304
>sp|Q462R2|ITBP2_PIG Integrin beta-1-binding protein 2 OS=Sus scrofa GN=ITGB1BP2 PE=2
SV=1
Length = 346
Score = 38.9 bits (89), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 198 VQNIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYR 257
+ + RH+W+QT+ VVV + V Q + I + D + Q + + L+
Sbjct: 216 LASCRHDWHQTDSLVVVTVYGQIPLPAFNWVEASQTELHIHIVFDGNRVFQAQ--VKLWG 273
Query: 258 PIDPTTSSFRILGTKIEVKLAKTSDERWSDLE 289
++ SS ++ +++E+ L K W+ LE
Sbjct: 274 VVNVEQSSVSLMPSRVEISLVKADPGFWAQLE 305
>sp|Q6AYK6|CYBP_RAT Calcyclin-binding protein OS=Rattus norvegicus GN=Cacybp PE=1 SV=1
Length = 229
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 187 AGTAPPPPTPTVQNIRHNWYQTEKQVVVDAL---IKQAKAETTQVNIDQNSVDIVVTLDP 243
A AP TV+ + W Q++K V + + Q AE QV+ + S D++V +
Sbjct: 63 AVVAPLTTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERSFDLLVK-NL 121
Query: 244 SSSTQHRLHLNLYRPIDPTTSSFRI-LGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKT 302
+ + NL +PI +SS ++ T I + K + RW L T+ K
Sbjct: 122 NGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYL-----TQVEKECKE 176
Query: 303 PYKRDWDKVAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLES 352
K +D E + EG L + +KIY +G D++++ +NK+++ES
Sbjct: 177 KEKPSYD-----TEADPSEG---LMNVLKKIYEDGDDDMKRTINKAWVES 218
>sp|Q9R000|ITBP2_MOUSE Integrin beta-1-binding protein 2 OS=Mus musculus GN=Itgb1bp2 PE=2
SV=1
Length = 350
Score = 38.5 bits (88), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 200 NIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPI 259
+ RH+W+QT+ VV+ + V Q + + + D + Q ++ L+ I
Sbjct: 218 SCRHDWHQTDSVVVLTVYGQIPLPAFNWVKASQTELHVHIVFDGNRVFQAQM--KLWGVI 275
Query: 260 DPTTSSFRILGTKIEVKLAKTSDERWSDLE 289
+ SS ++ +++E+ L K W+ LE
Sbjct: 276 NVEQSSVSLMPSRVEISLVKADPGSWAQLE 305
>sp|Q9CXW3|CYBP_MOUSE Calcyclin-binding protein OS=Mus musculus GN=Cacybp PE=1 SV=1
Length = 229
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 187 AGTAPPPPTPTVQNIRHNWYQTEKQVVVDAL---IKQAKAETTQVNIDQNSVDIVVTLDP 243
A AP TV+ + W Q++K V + + Q E QV+ + S D++V +
Sbjct: 63 AVVAPLTTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVK-NL 121
Query: 244 SSSTQHRLHLNLYRPIDPTTSSFRI-LGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKT 302
+ + NL +PI +SS ++ T I + K + RW L T+ K
Sbjct: 122 NGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYL-----TQVEKECKE 176
Query: 303 PYKRDWDKVAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLES 352
K +D E + EG L + +KIY +G D++++ +NK+++ES
Sbjct: 177 KEKPSYD-----TEADPSEG---LMNVLKKIYEDGDDDMKRTINKAWVES 218
>sp|Q4R4P3|CYBP_MACFA Calcyclin-binding protein OS=Macaca fascicularis GN=CACYBP PE=2
SV=1
Length = 228
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 187 AGTAPPPPTPTVQNIRHNWYQTEKQV---VVDALIKQAKAETTQVNIDQNSVDIVVTLDP 243
A AP TV+ + W Q++K V + + + Q E QV+ + S D++V +
Sbjct: 62 AVVAPITTGYTVKISNYGWDQSDKFVKIYITLSGVHQVPTENVQVHFTERSFDLLVK-NL 120
Query: 244 SSSTQHRLHLNLYRPIDPTTSSFRI-LGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKT 302
+ + + NL +PI SS ++ T + + K + RW L T+ K
Sbjct: 121 NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYL-----TQVEKECKE 175
Query: 303 PYKRDWDKVAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLES 352
K +D E + EG L + +KIY +G D++++ +NK+++ES
Sbjct: 176 KEKPSYD-----TETDPSEG---LMNVLKKIYEDGDDDMKRTINKAWVES 217
>sp|Q8TYV1|CAPPA_METKA Phosphoenolpyruvate carboxylase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=ppcA PE=3
SV=1
Length = 532
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 316 EDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLESGGTVLST------NWD-EVKRST 368
E E++ GE AL+ + ++Y ++++ A+ +FLE+ G+VL + N D E
Sbjct: 420 EIEERLGEDALDAVISRLYPMLREDLQFAVEYTFLETAGSVLPSSGVAMVNTDLEYCVEY 479
Query: 369 VDIKPPEGLEYKKW 382
+D++PP EY+
Sbjct: 480 LDLEPPSDFEYQNL 493
>sp|Q5R6Z8|CYBP_PONAB Calcyclin-binding protein OS=Pongo abelii GN=CACYBP PE=2 SV=1
Length = 228
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 187 AGTAPPPPTPTVQNIRHNWYQTEKQVVVDAL---IKQAKAETTQVNIDQNSVDIVVTLDP 243
A AP TV+ + W Q++K V + + Q E QV+ + S D++V +
Sbjct: 62 AVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVK-NL 120
Query: 244 SSSTQHRLHLNLYRPIDPTTSSFRI-LGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKT 302
+ + + NL +PI SS ++ T + + K + RW L T+ K
Sbjct: 121 NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYL-----TQVEKERKE 175
Query: 303 PYKRDWDKVAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLES 352
K +D E + EG L + +KIY +G D++++ +NK+++ES
Sbjct: 176 KEKPSYDA-----ETDPSEG---LMNVLKKIYEDGDDDMKRTINKAWVES 217
>sp|Q9HB71|CYBP_HUMAN Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2
Length = 228
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 187 AGTAPPPPTPTVQNIRHNWYQTEKQVVVDAL---IKQAKAETTQVNIDQNSVDIVVTLDP 243
A AP TV+ + W Q++K V + + Q E QV+ + S D++V +
Sbjct: 62 AVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVK-NL 120
Query: 244 SSSTQHRLHLNLYRPIDPTTSSFRI-LGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKT 302
+ + + NL +PI SS ++ T + + K + RW L T+ K
Sbjct: 121 NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYL-----TQVEKECKE 175
Query: 303 PYKRDWDKVAQQIEDEKKEGEAALNELFQKIYGEGSDEVRKAMNKSFLES 352
K +D E + EG L + +KIY +G D++++ +NK+++ES
Sbjct: 176 KEKPSYD-----TETDPSEG---LMNVLKKIYEDGDDDMKRTINKAWVES 217
>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus
GN=Usp19 PE=1 SV=1
Length = 1357
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 212 VVVDALIKQAKAETTQVNIDQNSVDIV--------VTLDPSSS--TQHRLHLNLYRPIDP 261
VVV +K+++ +T++V + ++ + L P T R + L I+P
Sbjct: 336 VVVHVYVKESRRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTIFRWQVKLRNLIEP 395
Query: 262 TTSSFRILGTKIEVKLAKTSDERWSDLEA 290
+F ++I++ L K +RW LEA
Sbjct: 396 EQCTFCFTASRIDICLRKRQSQRWGGLEA 424
>sp|Q47SI8|Y541_THEFY UPF0182 protein Tfu_0541 OS=Thermobifida fusca (strain YX)
GN=Tfu_0541 PE=3 SV=1
Length = 1018
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 282 DERWSDLEAKEETKAPSAPKTPYKRDWDKVAQQIEDEKK---EGEAALNELFQKIYGEGS 338
+E +D EA+EE + P A +AQ +ED + EG+AAL E YGE +
Sbjct: 945 EEPTTDGEAREEEEQPQASS--------DLAQALEDAAEAYEEGQAALREGDFAAYGEAN 996
Query: 339 DEVRKAMNKSFLESG 353
+ +++A++++ SG
Sbjct: 997 ERLKEALDRAKAASG 1011
>sp|Q9ZPY6|ARFK_ARATH Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3
Length = 622
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 269 LGTKIEVKLAKTSDERWSDLEAKEETKAPSAPKTPYKRDWDKVAQQIEDEKKE----GEA 324
+G +++ L ++ DE +LE E + +PK DK A D++ + G+
Sbjct: 523 VGRAVDLTLLRSYDELIKELEKMFEIEGELSPK-------DKWAIVFTDDEGDRMLVGDD 575
Query: 325 ALNE---LFQKIYGEGSDEVRKAMNKSFLESGGTVLSTNWDE 363
NE + +K++ SDEV+K +KS L GT+++ D+
Sbjct: 576 PWNEFCKMAKKLFIYPSDEVKKMRSKSLLGDKGTIVNLESDQ 617
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,965,975
Number of Sequences: 539616
Number of extensions: 5937490
Number of successful extensions: 16925
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 16855
Number of HSP's gapped (non-prelim): 76
length of query: 384
length of database: 191,569,459
effective HSP length: 119
effective length of query: 265
effective length of database: 127,355,155
effective search space: 33749116075
effective search space used: 33749116075
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)