Query         psy5485
Match_columns 384
No_of_seqs    229 out of 896
Neff          4.4 
Searched_HMMs 29240
Date          Fri Aug 16 18:43:33 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy5485.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5485hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2kmw_A Uncharacterized protein  99.9 5.1E-23 1.8E-27  182.2   7.0  109  201-319     5-114 (150)
  2 1ejf_A Progesterone receptor P  99.9 1.3E-22 4.4E-27  173.4   8.9  109  201-318     4-113 (125)
  3 2cg9_X CO-chaperone protein SB  99.8 3.1E-22 1.1E-26  173.6   3.6  112  200-319     6-131 (134)
  4 2xcm_C SGT1-like protein, cyto  99.8 7.7E-21 2.6E-25  151.9  10.5   90  200-291     2-91  (92)
  5 1x5m_A Calcyclin-binding prote  99.8 5.6E-20 1.9E-24  157.3  13.7   93  199-293    19-116 (127)
  6 1wh0_A Ubiquitin carboxyl-term  99.8 7.5E-20 2.6E-24  159.4   9.6   93  198-292    17-122 (134)
  7 1rl1_A Suppressor of G2 allele  99.8 1.3E-19 4.5E-24  150.9  10.4   94  198-293     7-100 (114)
  8 2o30_A Nuclear movement protei  99.8 6.8E-19 2.3E-23  151.5   9.4  122  201-356     5-129 (131)
  9 1wgv_A KIAA1068 protein; CS do  99.7 5.5E-16 1.9E-20  132.0  14.6   93  199-293    18-113 (124)
 10 1wfi_A Nuclear distribution ge  99.6 1.6E-15 5.4E-20  130.1  10.5   88  200-292     7-99  (131)
 11 2rh0_A NUDC domain-containing   99.6 7.1E-15 2.4E-19  130.7  12.0   88  199-292    12-104 (157)
 12 2jtt_C Calcyclin-binding prote  99.6   4E-16 1.4E-20  107.8   2.3   33  321-353     3-35  (35)
 13 3qor_A Nuclear migration prote  99.5 4.2E-14 1.4E-18  120.3  12.2   90  198-292    14-108 (121)
 14 3gla_A Low molecular weight he  98.3 6.8E-06 2.3E-10   66.4  12.0   82  200-281     4-98  (100)
 15 4fei_A Heat shock protein-rela  98.3   1E-05 3.4E-10   66.2  11.5   83  200-282     6-96  (102)
 16 3aab_A Putative uncharacterize  98.1 3.1E-05   1E-09   65.2  11.4   82  201-282    25-117 (123)
 17 1gme_A Heat shock protein 16.9  97.8 0.00011 3.7E-09   64.3  10.8   84  199-282    42-139 (151)
 18 4eld_A MJ16.5-P1, small heat s  97.8 0.00016 5.5E-09   63.5  11.3   80  203-282    59-152 (161)
 19 2wj5_A Heat shock protein beta  97.7 9.8E-05 3.3E-09   60.4   8.0   80  203-282     4-90  (101)
 20 2k8q_A Protein SHQ1; beta-sand  97.7 0.00013 4.5E-09   63.8   8.4   84  200-290     3-92  (134)
 21 3l1e_A Alpha-crystallin A chai  97.6 0.00044 1.5E-08   57.1  10.5   80  203-282     5-91  (106)
 22 3q9p_A Heat shock protein beta  97.5 0.00079 2.7E-08   53.3   9.9   75  206-280     3-84  (85)
 23 3eud_A Protein SHQ1; CS domain  97.4  0.0014 4.7E-08   56.1  11.5   85  199-290    16-106 (115)
 24 2y1y_A Alpha-crystallin B chai  97.2 0.00083 2.8E-08   53.6   7.5   75  207-281     3-84  (90)
 25 2klr_A Alpha-crystallin B chai  97.1  0.0012 4.2E-08   59.4   8.3   80  203-282    66-152 (175)
 26 2bol_A TSP36, small heat shock  96.9  0.0031 1.1E-07   61.7   9.4   83  201-283    99-191 (314)
 27 2bol_A TSP36, small heat shock  93.6    0.19 6.6E-06   49.0   8.3   73  208-280   231-313 (314)
 28 1sz9_A PCF11 protein; RNA poly  22.7      46  0.0016   28.5   2.6   25  324-348    84-108 (144)

No 1  
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.87  E-value=5.1e-23  Score=182.17  Aligned_cols=109  Identities=19%  Similarity=0.256  Sum_probs=94.9

Q ss_pred             CcEEEEecCCEEEEEEEeCCCCCCCcEEEEe-ccEEEEEEEeCCCCCCeeEEeeccCCCcCCCCceEEEeCceEEEEEEc
Q psy5485         201 IRHNWYQTEKQVVVDALIKQAKAETTQVNID-QNSVDIVVTLDPSSSTQHRLHLNLYRPIDPTTSSFRILGTKIEVKLAK  279 (384)
Q Consensus       201 ~RyDWyQT~d~VtItI~lKgV~kEdVkVeft-e~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPeeSk~KVt~~KIEI~LkK  279 (384)
                      |+|+||||.+.|+|+|+++++  +++.|+|+ +++|+|++.+.  +++.|.++|+||++|+|+ |++++++++|+|+|+|
T Consensus         5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~--~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~K   79 (150)
T 2kmw_A            5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGA--QGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQK   79 (150)
T ss_dssp             CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETT--TTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEEE
T ss_pred             CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcC--CCceEEEEeEhhhccccc-ceEEecCCEEEEEEEE
Confidence            689999999999999999987  68999999 78999998733  367899999999999999 9999999999999999


Q ss_pred             CCCCCCCcccccccccCCCCCCCCCCCCcchhhhhhhhhh
Q psy5485         280 TSDERWSDLEAKEETKAPSAPKTPYKRDWDKVAQQIEDEK  319 (384)
Q Consensus       280 ke~~~WprLek~e~~~kp~yPsSk~kkDWDK~~dEdEdEe  319 (384)
                      +++.+|++|++.+.+ .++|.    ++|||||.+|+++|+
T Consensus        80 ~e~~~W~rL~k~~~K-~~~~l----k~Dwdkw~dedeeee  114 (150)
T 2kmw_A           80 EERSWWTRLLKSEEK-PAPYI----KVDWNKWCDEDEEVN  114 (150)
T ss_dssp             CCSSCCSCSBSCCSS-CCTTE----EECSSSSCCSSCCCC
T ss_pred             CCCCcCcccccCCcc-cCccc----cccchhcCCchhccc
Confidence            999999999987542 13444    789999999875554


No 2  
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.87  E-value=1.3e-22  Score=173.44  Aligned_cols=109  Identities=17%  Similarity=0.319  Sum_probs=92.7

Q ss_pred             CcEEEEecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCcCCCCceEEEeCceEEEEEEcC
Q psy5485         201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPIDPTTSSFRILGTKIEVKLAKT  280 (384)
Q Consensus       201 ~RyDWyQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPeeSk~KVt~~KIEI~LkKk  280 (384)
                      ++|+||||.+.|+|+|+++++  +++.|+|++++|+|++.++. ++..|.++++||++|+|++|++++.+++|+|+|+|+
T Consensus         4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~-~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~   80 (125)
T 1ejf_A            4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGS-DNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKG   80 (125)
T ss_dssp             CCEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETT-TTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEES
T ss_pred             CceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCC-CCceEEEEEEccceeccccCEEEECCCEEEEEEEEC
Confidence            479999999999999999985  79999999999999987632 367899999999999999999999999999999999


Q ss_pred             CC-CCCCcccccccccCCCCCCCCCCCCcchhhhhhhhh
Q psy5485         281 SD-ERWSDLEAKEETKAPSAPKTPYKRDWDKVAQQIEDE  318 (384)
Q Consensus       281 e~-~~WprLek~e~~~kp~yPsSk~kkDWDK~~dEdEdE  318 (384)
                      ++ .+|++|++.+.+  +++.    ++|||||.+|++||
T Consensus        81 ~~~~~W~rL~~~~~K--~~~l----k~D~dkw~de~dd~  113 (125)
T 1ejf_A           81 ESGQSWPRLTKERAK--LNWL----SVDFNNWKDWEDDS  113 (125)
T ss_dssp             STTCCCSSSBSSCCC--CTTE----EECTTTCCCCC---
T ss_pred             CCCCCCCceecCCCc--cccc----cCChHHhCCccccc
Confidence            85 599999987542  3443    88999999865443


No 3  
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.84  E-value=3.1e-22  Score=173.64  Aligned_cols=112  Identities=21%  Similarity=0.399  Sum_probs=89.7

Q ss_pred             CCcEEEEecCCE-------EEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCC----CCCeeEEeeccCCCcCCCCceEEE
Q psy5485         200 NIRHNWYQTEKQ-------VVVDALIKQAKAETTQVNIDQNSVDIVVTLDPS----SSTQHRLHLNLYRPIDPTTSSFRI  268 (384)
Q Consensus       200 k~RyDWyQT~d~-------VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a----~gk~Y~l~IeLf~eIdPeeSk~KV  268 (384)
                      .|+|+||||.+.       |+|+|+++++  +++.|+|++++|.|++.+.++    +++.|.++++||++|+|++|++++
T Consensus         6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~v   83 (134)
T 2cg9_X            6 NPQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKV   83 (134)
T ss_dssp             -----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEEE
T ss_pred             CCCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEEE
Confidence            378999999987       9999999986  589999999999999876421    136899999999999999999999


Q ss_pred             eCce-EEEEEEcCC--CCCCCcccccccccCCCCCCCCCCCCcchhhhhhhhhh
Q psy5485         269 LGTK-IEVKLAKTS--DERWSDLEAKEETKAPSAPKTPYKRDWDKVAQQIEDEK  319 (384)
Q Consensus       269 t~~K-IEI~LkKke--~~~WprLek~e~~~kp~yPsSk~kkDWDK~~dEdEdEe  319 (384)
                      .+++ |+|+|+|++  +.+|++|++.+.+  +++.    ++|||||++|||+|+
T Consensus        84 ~~~~~vei~L~K~~~~~~~W~rL~k~~~K--~~~l----k~D~dkw~dEde~e~  131 (134)
T 2cg9_X           84 ANGQHYFLKLYKKDLESEYWPRLTKEKVK--YPYI----KTDFDKWVDADEQDE  131 (134)
T ss_dssp             CCC--CEEEEEECSSSSCCCSCSSSSCCC--CSSE----EECTTTCCCSSSSSC
T ss_pred             CCCEEEEEEEEECCCCCCCCCceecCCCc--cCcc----cCCchhcCCcccccc
Confidence            9999 999999998  5799999987542  3333    889999999886655


No 4  
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.84  E-value=7.7e-21  Score=151.87  Aligned_cols=90  Identities=27%  Similarity=0.478  Sum_probs=83.8

Q ss_pred             CCcEEEEecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCcCCCCceEEEeCceEEEEEEc
Q psy5485         200 NIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPIDPTTSSFRILGTKIEVKLAK  279 (384)
Q Consensus       200 k~RyDWyQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPeeSk~KVt~~KIEI~LkK  279 (384)
                      +++|+|+||.+.|+|+|+++|+.++++.|+|++++|+|++.+.+  +..|.++++||++|+|++|++++.+++|+|+|+|
T Consensus         2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~--~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K   79 (92)
T 2xcm_C            2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG--EDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAK   79 (92)
T ss_dssp             CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTT--SCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEB
T ss_pred             CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCC--CcEEEEeeEcCCccCchhEEEEEECCEEEEEEEc
Confidence            58999999999999999999998999999999999999986543  6789999999999999999999999999999999


Q ss_pred             CCCCCCCccccc
Q psy5485         280 TSDERWSDLEAK  291 (384)
Q Consensus       280 ke~~~WprLek~  291 (384)
                      +++++|++|+++
T Consensus        80 ~~~~~W~~L~~~   91 (92)
T 2xcm_C           80 ADIITWASLEHG   91 (92)
T ss_dssp             SSSCCCSCSBTT
T ss_pred             CCCCcchhcccC
Confidence            998899999864


No 5  
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83  E-value=5.6e-20  Score=157.29  Aligned_cols=93  Identities=23%  Similarity=0.325  Sum_probs=84.1

Q ss_pred             CCCcEEEEecCCEEEEEEEeCCC---CCCCcEEEEeccEEEEEEEeCCCCCCeeEEee-ccCCCcCCCCceEEEeCceEE
Q psy5485         199 QNIRHNWYQTEKQVVVDALIKQA---KAETTQVNIDQNSVDIVVTLDPSSSTQHRLHL-NLYRPIDPTTSSFRILGTKIE  274 (384)
Q Consensus       199 ~k~RyDWyQT~d~VtItI~lKgV---~kEdVkVefte~sLsVsi~~~~a~gk~Y~l~I-eLf~eIdPeeSk~KVt~~KIE  274 (384)
                      ..+||+|+||.+.|+|+|+++++   +++++.|+|++++|+|.+.+.+  +..|.+++ +||++|+|++|+|++.+++|+
T Consensus        19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~--~~~y~~~~~~L~~~I~~e~S~~~v~~~kVe   96 (127)
T 1x5m_A           19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN--GKSYSMIVNNLLKPISVEGSSKKVKTDTVL   96 (127)
T ss_dssp             ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS--SSCEEEEEECBSSCCCTTTCEEEEETTEEE
T ss_pred             CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC--CCcEEEEhHHhcCccCcccCEEEEeCCEEE
Confidence            45699999999999999999998   7899999999999999986553  67899999 599999999999999999999


Q ss_pred             EEEEcCCCC-CCCccccccc
Q psy5485         275 VKLAKTSDE-RWSDLEAKEE  293 (384)
Q Consensus       275 I~LkKke~~-~WprLek~e~  293 (384)
                      |+|+|++.+ +|++|++.+.
T Consensus        97 i~L~K~~~~~~W~~L~~~~~  116 (127)
T 1x5m_A           97 ILCRKKVENTRWDYLTQVEK  116 (127)
T ss_dssp             EEEECSSSSCCCSSSBHHHH
T ss_pred             EEEEECCCCCCCCccccccc
Confidence            999999865 9999997543


No 6  
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.80  E-value=7.5e-20  Score=159.38  Aligned_cols=93  Identities=22%  Similarity=0.442  Sum_probs=85.2

Q ss_pred             CCCCcEEEEec-CCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCCCCC------------eeEEeeccCCCcCCCCc
Q psy5485         198 VQNIRHNWYQT-EKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSST------------QHRLHLNLYRPIDPTTS  264 (384)
Q Consensus       198 ~~k~RyDWyQT-~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a~gk------------~Y~l~IeLf~eIdPeeS  264 (384)
                      ...+||+|||| .+.|+|+|+++++.++++.|+|++++|+|.+...+  +.            .|.++++||++|+|++|
T Consensus        17 ~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~--~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S   94 (134)
T 1wh0_A           17 LAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRD--GNFLRLHPGCGPHTTFRWQVKLRNLIEPEQC   94 (134)
T ss_dssp             ESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCC--HHHHHHSTTCCTTSCEEEEEEBSSCEEEEEE
T ss_pred             ccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCC--CcccccccccCcceeEEEeccccccCCchhC
Confidence            45789999999 99999999999999999999999999999987553  22            79999999999999999


Q ss_pred             eEEEeCceEEEEEEcCCCCCCCcccccc
Q psy5485         265 SFRILGTKIEVKLAKTSDERWSDLEAKE  292 (384)
Q Consensus       265 k~KVt~~KIEI~LkKke~~~WprLek~e  292 (384)
                      +|++.+++|||+|+|+++.+|++|++..
T Consensus        95 ~~~v~~~kIeI~L~K~e~~~W~~L~~~~  122 (134)
T 1wh0_A           95 TFCFTASRIDICLRKRQSQRWGGLEAPA  122 (134)
T ss_dssp             EEEECSSEEEEEEEESSSCCCSCSBCCC
T ss_pred             EEEEeCCEEEEEEEECCCCccccccccC
Confidence            9999999999999999989999999754


No 7  
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.80  E-value=1.3e-19  Score=150.93  Aligned_cols=94  Identities=36%  Similarity=0.661  Sum_probs=85.7

Q ss_pred             CCCCcEEEEecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCcCCCCceEEEeCceEEEEE
Q psy5485         198 VQNIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPIDPTTSSFRILGTKIEVKL  277 (384)
Q Consensus       198 ~~k~RyDWyQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPeeSk~KVt~~KIEI~L  277 (384)
                      .+.++|+|+||.+.|+|+|+++|+.++++.|+|++++|+|++...+  +..|.++++||++|+|++|++++.+++|+|+|
T Consensus         7 ~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~--~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L   84 (114)
T 1rl1_A            7 QSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS--GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKL   84 (114)
T ss_dssp             -CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT--SSEEEEEECBSSCCCGGGEEEEECSSSEEEEE
T ss_pred             CCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC--CcEEEEEeeCCCcCCccccEEEEECCEEEEEE
Confidence            3568999999999999999999998899999999999999987653  67899999999999999999999999999999


Q ss_pred             EcCCCCCCCccccccc
Q psy5485         278 AKTSDERWSDLEAKEE  293 (384)
Q Consensus       278 kKke~~~WprLek~e~  293 (384)
                      +|++.++|++|++.+.
T Consensus        85 ~K~~~~~W~~L~~~~~  100 (114)
T 1rl1_A           85 KKPEAVRWEKLEGQGD  100 (114)
T ss_dssp             ECSSCCCCSSSBTTC-
T ss_pred             EcCCCCcCccccccCC
Confidence            9999889999997654


No 8  
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.77  E-value=6.8e-19  Score=151.48  Aligned_cols=122  Identities=18%  Similarity=0.306  Sum_probs=74.8

Q ss_pred             CcEEEEecCCEEEEEEEe-CCCCCCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCcCCCCceEEEeCceEEEEEEc
Q psy5485         201 IRHNWYQTEKQVVVDALI-KQAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPIDPTTSSFRILGTKIEVKLAK  279 (384)
Q Consensus       201 ~RyDWyQT~d~VtItI~l-KgV~kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPeeSk~KVt~~KIEI~LkK  279 (384)
                      ++|.|+||.+.|+|+|++ ++++++++.|+|++++|.|.+.     |.. .+.++||++|+|++|+|++.+++|+|+|.|
T Consensus         5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~-----g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~L~K   78 (131)
T 2o30_A            5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ-----GEI-VIDGELLHEVDVSSLWWVINGDVVDVNVTK   78 (131)
T ss_dssp             CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET-----TEE-EEEEEBSSCEEEEEEEEEEETTEEEEEEEE
T ss_pred             CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC-----CEe-eEccccccccccccCEEEEeCCEEEEEEEE
Confidence            689999999999999998 5888899999999999999873     345 688899999999999999999999999999


Q ss_pred             CCCCCCCcccccccccCCCCCCCCCCCCcchhhhhhhhhhhhch-HH-HHHHHHHHhCCCCHHHHHHHHHHHHHcCCee
Q psy5485         280 TSDERWSDLEAKEETKAPSAPKTPYKRDWDKVAQQIEDEKKEGE-AA-LNELFQKIYGEGSDEVRKAMNKSFLESGGTV  356 (384)
Q Consensus       280 ke~~~WprLek~e~~~kp~yPsSk~kkDWDK~~dEdEdEe~egd-aa-Ln~lFKkIY~~gDDDtKRAMmKSf~ESnGTv  356 (384)
                      +...+|++|.+.+.           +.|..++.         +. .+ |++|        |+|||+++.|.+.+.+...
T Consensus        79 ~~~~~W~~L~~~~~-----------~id~~k~~---------~e~~~~l~dl--------d~e~~~~v~k~~~d~~qk~  129 (131)
T 2o30_A           79 KRNEWWDSLLVGSE-----------SVDVQKLA---------ENKHADMSML--------DAEAREVVEKMMHNTSGKD  129 (131)
T ss_dssp             SSCCCCSCSBC--------------------------------------------------------------------
T ss_pred             CCCCCCccccCCCC-----------CCCHhHcC---------cccccccccC--------CHHHHHHHHHHHHHHHHhh
Confidence            97789999997542           22333332         11 12 5444        9999999999998877543


No 9  
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.68  E-value=5.5e-16  Score=132.02  Aligned_cols=93  Identities=17%  Similarity=0.275  Sum_probs=82.3

Q ss_pred             CCCcEEEEecCCEEEEEEEeC-CC-CCCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCcCCCCceEEEeCce-EEE
Q psy5485         199 QNIRHNWYQTEKQVVVDALIK-QA-KAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPIDPTTSSFRILGTK-IEV  275 (384)
Q Consensus       199 ~k~RyDWyQT~d~VtItI~lK-gV-~kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPeeSk~KVt~~K-IEI  275 (384)
                      ..++|.|+||.+.|+|+|.++ ++ +++++.|+|++++|+|.+....  +..|.+.++||++|+|++|+|++.+++ |+|
T Consensus        18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~--~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i   95 (124)
T 1wgv_A           18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEEN--GERVLMEGKLTHKINTESSLWSLEPGKCVLV   95 (124)
T ss_dssp             CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSS--SEEEEEEEEBSSCBCTTTCEEEECTTSEEEE
T ss_pred             cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccC--CCceEEcccccCcCCCcCCEEEEeCCCEEEE
Confidence            446899999999999999987 66 7899999999999999987532  556779999999999999999999987 999


Q ss_pred             EEEcCCCCCCCccccccc
Q psy5485         276 KLAKTSDERWSDLEAKEE  293 (384)
Q Consensus       276 ~LkKke~~~WprLek~e~  293 (384)
                      +|.|++..+|++|.+.+.
T Consensus        96 ~L~K~~~~~W~~L~~~~~  113 (124)
T 1wgv_A           96 NLSKVGEYWWNAILEGEE  113 (124)
T ss_dssp             EECBSSSCCCSCSBTTSC
T ss_pred             EEEECCCCCCcCcccCCC
Confidence            999998889999997653


No 10 
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.62  E-value=1.6e-15  Score=130.15  Aligned_cols=88  Identities=19%  Similarity=0.314  Sum_probs=77.9

Q ss_pred             CCcEEEEecCCEEEEEEEeC-C--CCCCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCcCCCCceEEEeCc-eEEE
Q psy5485         200 NIRHNWYQTEKQVVVDALIK-Q--AKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPIDPTTSSFRILGT-KIEV  275 (384)
Q Consensus       200 k~RyDWyQT~d~VtItI~lK-g--V~kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPeeSk~KVt~~-KIEI  275 (384)
                      .++|.|+||.+.|+|+|.++ +  ++++++.|+|++++|+|.+.     +..+.+.++||++|+|++|+|++.++ .|+|
T Consensus         7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k-----g~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i   81 (131)
T 1wfi_A            7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK-----GQPPVVDGELYNEVKVEESSWLIEDGKVVTV   81 (131)
T ss_dssp             CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET-----TSCCSBCSCBSSCBCSTTCEEEEETTTEEEE
T ss_pred             CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC-----CceEEEecccccccccccCEEEEcCCCEEEE
Confidence            36799999999999999988 4  78899999999999999873     34566888999999999999999998 5999


Q ss_pred             EEEcCCC-CCCCcccccc
Q psy5485         276 KLAKTSD-ERWSDLEAKE  292 (384)
Q Consensus       276 ~LkKke~-~~WprLek~e  292 (384)
                      +|.|++. .+|++|.+.+
T Consensus        82 ~L~K~~~~~~W~~L~~~~   99 (131)
T 1wfi_A           82 HLEKINKMEWWNRLVTSD   99 (131)
T ss_dssp             EEEBSSSCCCCSCSBSSC
T ss_pred             EEEECCCCCCChhhhcCC
Confidence            9999986 5999999754


No 11 
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.59  E-value=7.1e-15  Score=130.70  Aligned_cols=88  Identities=20%  Similarity=0.388  Sum_probs=77.6

Q ss_pred             CCCcEEEEecCCEEEEEEEeC-CCCCCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCcCCCCceEEEeCce-EEEE
Q psy5485         199 QNIRHNWYQTEKQVVVDALIK-QAKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPIDPTTSSFRILGTK-IEVK  276 (384)
Q Consensus       199 ~k~RyDWyQT~d~VtItI~lK-gV~kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPeeSk~KVt~~K-IEI~  276 (384)
                      ..++|.|+||.+.|+|+|.++ ++..+++.|+|++++|+|.+.     +.. .+.++||++|+|++|+|++.+++ |+|+
T Consensus        12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k-----g~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~   85 (157)
T 2rh0_A           12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG-----GRE-ILKGKLFDSTIADEGTWTLEDRKMVRIV   85 (157)
T ss_dssp             ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET-----TEE-EEEEEBSSCBCGGGCEEEEECCCEEEEE
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC-----CEE-EEeeccccccCccccEEEEcCCcEEEEE
Confidence            347899999999999999986 777899999999999999873     334 48889999999999999999988 9999


Q ss_pred             EEcCCC---CCCCcccccc
Q psy5485         277 LAKTSD---ERWSDLEAKE  292 (384)
Q Consensus       277 LkKke~---~~WprLek~e  292 (384)
                      |.|++.   .+|++|.+.+
T Consensus        86 L~K~~~~~~~~W~~L~k~~  104 (157)
T 2rh0_A           86 LTKTKRDAANCWTSLLESE  104 (157)
T ss_dssp             EEBSSCSTTCCCSEEETTE
T ss_pred             EEEcCCCcCCcChhhhcCC
Confidence            999885   7999999754


No 12 
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=99.58  E-value=4e-16  Score=107.75  Aligned_cols=33  Identities=30%  Similarity=0.688  Sum_probs=30.0

Q ss_pred             hchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q psy5485         321 EGEAALNELFQKIYGEGSDEVRKAMNKSFLESG  353 (384)
Q Consensus       321 egdaaLn~lFKkIY~~gDDDtKRAMmKSf~ESn  353 (384)
                      +|+++||+|||+||++|||||||||+|||+|||
T Consensus         3 dp~~~l~~~fk~iY~~gddd~kram~KS~~eS~   35 (35)
T 2jtt_C            3 GSSEGLMNVLKKIYEDGDDDMKRTINKAWVESR   35 (35)
T ss_dssp             --CCSHHHHHHHHHTTCCSSHHHHHHHHHHTTC
T ss_pred             ChhHHHHHHHHHHHhcCCHHHHHHHHHHHhhcC
Confidence            467889999999999999999999999999997


No 13 
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.54  E-value=4.2e-14  Score=120.30  Aligned_cols=90  Identities=20%  Similarity=0.295  Sum_probs=79.0

Q ss_pred             CCCCcEEEEecCCEEEEEEEeC-C--CCCCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCcCCCCceEEEeCc-eE
Q psy5485         198 VQNIRHNWYQTEKQVVVDALIK-Q--AKAETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPIDPTTSSFRILGT-KI  273 (384)
Q Consensus       198 ~~k~RyDWyQT~d~VtItI~lK-g--V~kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPeeSk~KVt~~-KI  273 (384)
                      ...++|.|+||.+.|+|+|.++ +  ++.+++.|+|++++|+|.+.     +..|.++.+||++|+|++|+|++.++ +|
T Consensus        14 ~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k-----g~~~~~~g~L~~~I~~deS~w~i~~~~~i   88 (121)
T 3qor_A           14 ADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK-----GQPAIIDGELYNEVKVEESSWLIADGAVV   88 (121)
T ss_dssp             CBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET-----TSCCSEEEEBSSCBCGGGCEEEEETTTEE
T ss_pred             CcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc-----CcceEEeccccccccccccEEEEcCCCEE
Confidence            3456899999999999999987 4  67899999999999998873     44677899999999999999999986 89


Q ss_pred             EEEEEcCCC-CCCCcccccc
Q psy5485         274 EVKLAKTSD-ERWSDLEAKE  292 (384)
Q Consensus       274 EI~LkKke~-~~WprLek~e  292 (384)
                      +|+|.|.+. .+|++|...+
T Consensus        89 ~i~L~K~~~~~~W~~L~~~~  108 (121)
T 3qor_A           89 TVHLEKINKMEWWSRLVSSD  108 (121)
T ss_dssp             EEEEEBSSSSCCCSCSBTTS
T ss_pred             EEEEEECCCCCCChhhhcCC
Confidence            999999875 6999998754


No 14 
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.32  E-value=6.8e-06  Score=66.37  Aligned_cols=82  Identities=12%  Similarity=0.088  Sum_probs=70.3

Q ss_pred             CCcEEEEecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCC---C----------CCeeEEeeccCCCcCCCCceE
Q psy5485         200 NIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPS---S----------STQHRLHLNLYRPIDPTTSSF  266 (384)
Q Consensus       200 k~RyDWyQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a---~----------gk~Y~l~IeLf~eIdPeeSk~  266 (384)
                      .|.++|+++++.+.|.+.++|+.++++.|.+.++.|.|++.....   .          ...|...+.|-..|+++..+.
T Consensus         4 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A   83 (100)
T 3gla_A            4 VPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITA   83 (100)
T ss_dssp             CCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEE
T ss_pred             cCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEE
Confidence            367999999999999999999999999999999999999865321   0          114777889999999999999


Q ss_pred             EEeCceEEEEEEcCC
Q psy5485         267 RILGTKIEVKLAKTS  281 (384)
Q Consensus       267 KVt~~KIEI~LkKke  281 (384)
                      ++.++.++|+|.|.+
T Consensus        84 ~~~~GvL~I~~pK~~   98 (100)
T 3gla_A           84 AGRNGVLEIRIPKRP   98 (100)
T ss_dssp             EEETTEEEEEEEBC-
T ss_pred             EEeCCEEEEEEecCC
Confidence            999999999999975


No 15 
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.25  E-value=1e-05  Score=66.17  Aligned_cols=83  Identities=13%  Similarity=0.187  Sum_probs=71.5

Q ss_pred             CCcEEEEecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCCC--------CCeeEEeeccCCCcCCCCceEEEeCc
Q psy5485         200 NIRHNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSS--------STQHRLHLNLYRPIDPTTSSFRILGT  271 (384)
Q Consensus       200 k~RyDWyQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a~--------gk~Y~l~IeLf~eIdPeeSk~KVt~~  271 (384)
                      .|.++|+++++.+.|.+.++|+.++++.|.++++.|.|++......        ...|...+.|-..|+++..+.++..+
T Consensus         6 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~G   85 (102)
T 4fei_A            6 TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGG   85 (102)
T ss_dssp             CCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETT
T ss_pred             cCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECC
Confidence            3679999999999999999999999999999999999988653200        11477788999999999999999999


Q ss_pred             eEEEEEEcCCC
Q psy5485         272 KIEVKLAKTSD  282 (384)
Q Consensus       272 KIEI~LkKke~  282 (384)
                      .++|+|.|.++
T Consensus        86 vL~I~lpK~~~   96 (102)
T 4fei_A           86 VLTVRFEKLRP   96 (102)
T ss_dssp             EEEEEEEBSSC
T ss_pred             EEEEEEEccCc
Confidence            99999999764


No 16 
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.08  E-value=3.1e-05  Score=65.17  Aligned_cols=82  Identities=12%  Similarity=0.093  Sum_probs=70.4

Q ss_pred             CcEEEEecCCEEEEEEEeCCCCCCCcEEEEec-cEEEEEEEeCCCC-CC--------eeEEeeccCCCcCCCCc-eEEEe
Q psy5485         201 IRHNWYQTEKQVVVDALIKQAKAETTQVNIDQ-NSVDIVVTLDPSS-ST--------QHRLHLNLYRPIDPTTS-SFRIL  269 (384)
Q Consensus       201 ~RyDWyQT~d~VtItI~lKgV~kEdVkVefte-~sLsVsi~~~~a~-gk--------~Y~l~IeLf~eIdPeeS-k~KVt  269 (384)
                      |.++|+++++.+.|.+.++|+.++++.|.+++ +.|.|++...... +.        .|...+.|-..|+++.. +.+..
T Consensus        25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~  104 (123)
T 3aab_A           25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYE  104 (123)
T ss_dssp             SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEEE
T ss_pred             CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEc
Confidence            45899999999999999999999999999999 9999998743200 11        57778899999999998 88999


Q ss_pred             CceEEEEEEcCCC
Q psy5485         270 GTKIEVKLAKTSD  282 (384)
Q Consensus       270 ~~KIEI~LkKke~  282 (384)
                      .+.+.|+|.|.+.
T Consensus       105 ~GvL~I~lPK~~~  117 (123)
T 3aab_A          105 NGVLTIRIPIAGT  117 (123)
T ss_dssp             TTEEEEEEEGGGE
T ss_pred             CCEEEEEEEcCCC
Confidence            9999999999763


No 17 
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.84  E-value=0.00011  Score=64.33  Aligned_cols=84  Identities=17%  Similarity=0.189  Sum_probs=70.3

Q ss_pred             CCCcEEEEecCCEEEEEEEeCCCCCCCcEEEEe-ccEEEEEEEeCCC---C----------CCeeEEeeccCCCcCCCCc
Q psy5485         199 QNIRHNWYQTEKQVVVDALIKQAKAETTQVNID-QNSVDIVVTLDPS---S----------STQHRLHLNLYRPIDPTTS  264 (384)
Q Consensus       199 ~k~RyDWyQT~d~VtItI~lKgV~kEdVkVeft-e~sLsVsi~~~~a---~----------gk~Y~l~IeLf~eIdPeeS  264 (384)
                      ..+.++|+++++.+.|.+.++|+.++++.|.+. ++.|.|++.....   .          ...|...+.|-..|+++..
T Consensus        42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i  121 (151)
T 1gme_A           42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEV  121 (151)
T ss_dssp             GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGC
T ss_pred             cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccce
Confidence            346799999999999999999999999999995 6799998754310   0          1247778899999999998


Q ss_pred             eEEEeCceEEEEEEcCCC
Q psy5485         265 SFRILGTKIEVKLAKTSD  282 (384)
Q Consensus       265 k~KVt~~KIEI~LkKke~  282 (384)
                      +.++..+.++|+|.|.+.
T Consensus       122 ~A~~~nGvL~I~lPK~~~  139 (151)
T 1gme_A          122 KAGLENGVLTVTVPKAEV  139 (151)
T ss_dssp             EEEEETTEEEEEEECCCC
T ss_pred             EEEEECCEEEEEEEccCc
Confidence            999999999999999763


No 18 
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.81  E-value=0.00016  Score=63.50  Aligned_cols=80  Identities=14%  Similarity=0.162  Sum_probs=69.6

Q ss_pred             EEEEecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCC---C-----------CCeeEEeeccCCCcCCCCceEEE
Q psy5485         203 HNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPS---S-----------STQHRLHLNLYRPIDPTTSSFRI  268 (384)
Q Consensus       203 yDWyQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a---~-----------gk~Y~l~IeLf~eIdPeeSk~KV  268 (384)
                      +|++++++.+.|.+.++|+.++++.|.++++.|.|++.....   .           ...|.-.+.|-..|+++..+.++
T Consensus        59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~  138 (161)
T 4eld_A           59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF  138 (161)
T ss_dssp             EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred             eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence            999999999999999999999999999999999998865320   0           12577788999999999989999


Q ss_pred             eCceEEEEEEcCCC
Q psy5485         269 LGTKIEVKLAKTSD  282 (384)
Q Consensus       269 t~~KIEI~LkKke~  282 (384)
                      .++.++|+|.|.+.
T Consensus       139 ~nGvL~I~lpK~~~  152 (161)
T 4eld_A          139 ENGVLSVILPKAES  152 (161)
T ss_dssp             ETTEEEEEEEBCGG
T ss_pred             ECCEEEEEEEcCCC
Confidence            99999999999763


No 19 
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.72  E-value=9.8e-05  Score=60.41  Aligned_cols=80  Identities=11%  Similarity=0.105  Sum_probs=68.0

Q ss_pred             EEEEecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCC-CC-----CeeEEeeccCCCcCCCCceEEE-eCceEEE
Q psy5485         203 HNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPS-SS-----TQHRLHLNLYRPIDPTTSSFRI-LGTKIEV  275 (384)
Q Consensus       203 yDWyQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a-~g-----k~Y~l~IeLf~eIdPeeSk~KV-t~~KIEI  275 (384)
                      +|++++++.+.|.+.++|+.++++.|.+.++.|.|++..... ++     ..|...+.|-..|+++..+.++ ..+.+.|
T Consensus         4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I   83 (101)
T 2wj5_A            4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSI   83 (101)
T ss_dssp             CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEE
T ss_pred             EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEE
Confidence            578999999999999999999999999999999999865310 11     2366788999999999999999 6999999


Q ss_pred             EEEcCCC
Q psy5485         276 KLAKTSD  282 (384)
Q Consensus       276 ~LkKke~  282 (384)
                      +|.|.+.
T Consensus        84 ~lPK~~~   90 (101)
T 2wj5_A           84 QATPASA   90 (101)
T ss_dssp             EECBCCC
T ss_pred             EEECCCc
Confidence            9999753


No 20 
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.67  E-value=0.00013  Score=63.82  Aligned_cols=84  Identities=23%  Similarity=0.303  Sum_probs=71.3

Q ss_pred             CCcEEEEecCCEEEEEEEeCCCC--CCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCc-CCCCc--eEEEeCceEE
Q psy5485         200 NIRHNWYQTEKQVVVDALIKQAK--AETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPI-DPTTS--SFRILGTKIE  274 (384)
Q Consensus       200 k~RyDWyQT~d~VtItI~lKgV~--kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eI-dPeeS--k~KVt~~KIE  274 (384)
                      .|+|.=.|+++.|+|.|.++.+.  ..++.+.++++.+.|+.       ..|.|.|.|-++| +++.+  +|......++
T Consensus         3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~-------~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~   75 (134)
T 2k8q_A            3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-------SPYYLRLRFPHELIDDERSTAQYDSKDECIN   75 (134)
T ss_dssp             CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECS-------SSSCEEECCSSCEECCSSCEEEEETTTTEEE
T ss_pred             CceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEec-------CCeEEEecCCCeeecCCCcceeEeccCCEEE
Confidence            37899999999999999999988  78999999999887764       4799999999999 66554  5556678999


Q ss_pred             EEEEcCC-CCCCCcccc
Q psy5485         275 VKLAKTS-DERWSDLEA  290 (384)
Q Consensus       275 I~LkKke-~~~WprLek  290 (384)
                      |+|.|.. +++++.|.-
T Consensus        76 VtLpK~~~Ge~F~dLD~   92 (134)
T 2k8q_A           76 VKVAKLNKNEYFEDLDL   92 (134)
T ss_dssp             EEEEESSTTCCCSSTTC
T ss_pred             EEEeCCCCCCCCCCccc
Confidence            9999987 569999864


No 21 
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.62  E-value=0.00044  Score=57.06  Aligned_cols=80  Identities=13%  Similarity=0.124  Sum_probs=68.2

Q ss_pred             EEEEecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCC-CC-----CeeEEeeccCCCcCCCCceEEE-eCceEEE
Q psy5485         203 HNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPS-SS-----TQHRLHLNLYRPIDPTTSSFRI-LGTKIEV  275 (384)
Q Consensus       203 yDWyQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a-~g-----k~Y~l~IeLf~eIdPeeSk~KV-t~~KIEI  275 (384)
                      .+++++++.+.|.+.++|+.++++.|.+.++.|.|++..... +.     ..|.-.+.|-..|+++.-+..+ .++.+.|
T Consensus         5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I   84 (106)
T 3l1e_A            5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTF   84 (106)
T ss_dssp             EEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEE
T ss_pred             eEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEE
Confidence            578999999999999999999999999999999999853210 11     2467788999999999999999 7899999


Q ss_pred             EEEcCCC
Q psy5485         276 KLAKTSD  282 (384)
Q Consensus       276 ~LkKke~  282 (384)
                      +|.|.+.
T Consensus        85 ~~PK~~~   91 (106)
T 3l1e_A           85 SGPKIPS   91 (106)
T ss_dssp             EEEBCCC
T ss_pred             EEEccCc
Confidence            9999764


No 22 
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.48  E-value=0.00079  Score=53.34  Aligned_cols=75  Identities=16%  Similarity=0.118  Sum_probs=64.1

Q ss_pred             EecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCC------CCCeeEEeeccCCCcCCCCceEEEe-CceEEEEEE
Q psy5485         206 YQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPS------SSTQHRLHLNLYRPIDPTTSSFRIL-GTKIEVKLA  278 (384)
Q Consensus       206 yQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a------~gk~Y~l~IeLf~eIdPeeSk~KVt-~~KIEI~Lk  278 (384)
                      .++++.+.|.+.++|+.++++.|.+.++.|.|++.....      ....|.-.+.|-..|+++..+.++. .+.+.|+|.
T Consensus         3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP   82 (85)
T 3q9p_A            3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP   82 (85)
T ss_dssp             CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred             cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence            468899999999999999999999999999999864310      0135778899999999999999998 899999999


Q ss_pred             cC
Q psy5485         279 KT  280 (384)
Q Consensus       279 Kk  280 (384)
                      |.
T Consensus        83 K~   84 (85)
T 3q9p_A           83 MP   84 (85)
T ss_dssp             CC
T ss_pred             cC
Confidence            85


No 23 
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.45  E-value=0.0014  Score=56.07  Aligned_cols=85  Identities=20%  Similarity=0.255  Sum_probs=71.1

Q ss_pred             CCCcEEEEecCCEEEEEEEeCCCC--CCCcEEEEeccEEEEEEEeCCCCCCeeEEeeccCCCcCCC-C--ceEEEeCceE
Q psy5485         199 QNIRHNWYQTEKQVVVDALIKQAK--AETTQVNIDQNSVDIVVTLDPSSSTQHRLHLNLYRPIDPT-T--SSFRILGTKI  273 (384)
Q Consensus       199 ~k~RyDWyQT~d~VtItI~lKgV~--kEdVkVefte~sLsVsi~~~~a~gk~Y~l~IeLf~eIdPe-e--Sk~KVt~~KI  273 (384)
                      ..|+|.=.|+++.|+|.|.++.+.  ..++.+.++++.+.|.+       ++|-|.|.|-++|..+ .  ++|....+.+
T Consensus        16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~-------~PYyLRL~lP~~vved~~~~A~YD~d~g~~   88 (115)
T 3eud_A           16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-------SPYYLRLRFPHELIDDERSTAQYDSKDECI   88 (115)
T ss_dssp             BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEE-------TTEEEEEECSSCEECSTTCEEEEETTTTEE
T ss_pred             eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEec-------CCeEEEEecCcceecCCCcceEEeCCCcEE
Confidence            347899999999999999999875  67899999999988876       4699999999999443 3  3777788999


Q ss_pred             EEEEEcCC-CCCCCcccc
Q psy5485         274 EVKLAKTS-DERWSDLEA  290 (384)
Q Consensus       274 EI~LkKke-~~~WprLek  290 (384)
                      .|+|.|.. ++..+.|.-
T Consensus        89 ~v~lpK~~~GE~F~dLDm  106 (115)
T 3eud_A           89 NVKVAKLNKNEYFEDLDL  106 (115)
T ss_dssp             EEEEEESSTTCCCCCTTC
T ss_pred             EEEEcCCcCCCcCCCccc
Confidence            99999987 567887753


No 24 
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.25  E-value=0.00083  Score=53.59  Aligned_cols=75  Identities=11%  Similarity=0.157  Sum_probs=60.1

Q ss_pred             ecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCC-CC-----CeeEEeeccCCCcCCCCceEEE-eCceEEEEEEc
Q psy5485         207 QTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPS-SS-----TQHRLHLNLYRPIDPTTSSFRI-LGTKIEVKLAK  279 (384)
Q Consensus       207 QT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a-~g-----k~Y~l~IeLf~eIdPeeSk~KV-t~~KIEI~LkK  279 (384)
                      ++++.+.|.+.++|+.++++.|.+.++.|.|++..... ++     ..|...+.|-..|+++..+.++ ..+.+.|+|.|
T Consensus         3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK   82 (90)
T 2y1y_A            3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPR   82 (90)
T ss_dssp             ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECB
T ss_pred             cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEc
Confidence            46788999999999999999999999999998864210 01     2477788999999999889999 79999999999


Q ss_pred             CC
Q psy5485         280 TS  281 (384)
Q Consensus       280 ke  281 (384)
                      .+
T Consensus        83 ~~   84 (90)
T 2y1y_A           83 KQ   84 (90)
T ss_dssp             C-
T ss_pred             CC
Confidence            75


No 25 
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=97.13  E-value=0.0012  Score=59.35  Aligned_cols=80  Identities=10%  Similarity=0.125  Sum_probs=64.5

Q ss_pred             EEEEecCCEEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCC-CC-----CeeEEeeccCCCcCCCCceEEE-eCceEEE
Q psy5485         203 HNWYQTEKQVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPS-SS-----TQHRLHLNLYRPIDPTTSSFRI-LGTKIEV  275 (384)
Q Consensus       203 yDWyQT~d~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a-~g-----k~Y~l~IeLf~eIdPeeSk~KV-t~~KIEI  275 (384)
                      .+++++++.+.|.+.++|+.++++.|++.++.|.|++..... ++     .+|.-.+.|-..|+++..+.++ ..+.++|
T Consensus        66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I  145 (175)
T 2klr_A           66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV  145 (175)
T ss_dssp             ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred             eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence            588999999999999999999999999999999998864310 01     2366788999999999999999 6999999


Q ss_pred             EEEcCCC
Q psy5485         276 KLAKTSD  282 (384)
Q Consensus       276 ~LkKke~  282 (384)
                      +|.|.+.
T Consensus       146 ~lPK~~~  152 (175)
T 2klr_A          146 NGPRKQV  152 (175)
T ss_dssp             EEECC--
T ss_pred             EEECCCC
Confidence            9999753


No 26 
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.91  E-value=0.0031  Score=61.71  Aligned_cols=83  Identities=16%  Similarity=0.146  Sum_probs=70.5

Q ss_pred             CcEEEEecCC----EEEEEEEeCCCCCCCcEEEEeccEEEEEEEeCCCC-----CCeeEEeeccCCCcCCCCceEEEe-C
Q psy5485         201 IRHNWYQTEK----QVVVDALIKQAKAETTQVNIDQNSVDIVVTLDPSS-----STQHRLHLNLYRPIDPTTSSFRIL-G  270 (384)
Q Consensus       201 ~RyDWyQT~d----~VtItI~lKgV~kEdVkVefte~sLsVsi~~~~a~-----gk~Y~l~IeLf~eIdPeeSk~KVt-~  270 (384)
                      +.+|.+++++    .+.|++.++|+.++++.|.+.++.|.|++......     ...|.-.+.|-..|+++..+.++. .
T Consensus        99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~n  178 (314)
T 2bol_A           99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTD  178 (314)
T ss_dssp             GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSS
T ss_pred             CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCC
Confidence            4567789998    99999999999999999999999999988543100     136888999999999999999999 9


Q ss_pred             ceEEEEEEcCCCC
Q psy5485         271 TKIEVKLAKTSDE  283 (384)
Q Consensus       271 ~KIEI~LkKke~~  283 (384)
                      +.+.|+|.|.++.
T Consensus       179 GVL~I~lPK~~~~  191 (314)
T 2bol_A          179 DVLVIEAPVNEPN  191 (314)
T ss_dssp             SEEEEEEEBSSCC
T ss_pred             CEEEEEEeccCcc
Confidence            9999999997743


No 27 
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=93.56  E-value=0.19  Score=49.03  Aligned_cols=73  Identities=10%  Similarity=0.058  Sum_probs=60.3

Q ss_pred             cCCEEEEEEEe-CCCCCCCcEEEEeccEEEEEEEeCCCC---------CCeeEEeeccCCCcCCCCceEEEeCceEEEEE
Q psy5485         208 TEKQVVVDALI-KQAKAETTQVNIDQNSVDIVVTLDPSS---------STQHRLHLNLYRPIDPTTSSFRILGTKIEVKL  277 (384)
Q Consensus       208 T~d~VtItI~l-KgV~kEdVkVefte~sLsVsi~~~~a~---------gk~Y~l~IeLf~eIdPeeSk~KVt~~KIEI~L  277 (384)
                      +++.+.|.+.+ +|+.++++.|+++++.|+|++.-....         ...|.-.+.|-..|+++.-+.++..+.+.|+|
T Consensus       231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~  310 (314)
T 2bol_A          231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA  310 (314)
T ss_dssp             SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred             CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence            34578888888 999999999999999999998754210         12477788999999999999999999999999


Q ss_pred             EcC
Q psy5485         278 AKT  280 (384)
Q Consensus       278 kKk  280 (384)
                      .|.
T Consensus       311 Pk~  313 (314)
T 2bol_A          311 PLF  313 (314)
T ss_dssp             EEE
T ss_pred             ecC
Confidence            884


No 28 
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=22.71  E-value=46  Score=28.46  Aligned_cols=25  Identities=16%  Similarity=0.232  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHHHH
Q psy5485         324 AALNELFQKIYGEGSDEVRKAMNKS  348 (384)
Q Consensus       324 aaLn~lFKkIY~~gDDDtKRAMmKS  348 (384)
                      ..|.++|...|..+|+++|+.|.+=
T Consensus        84 ~~l~~~f~~~~~~~d~~~r~k~~rL  108 (144)
T 1sz9_A           84 RNLFNLYKRTYLLVDNTTRTKLINM  108 (144)
T ss_dssp             TTHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            4688999999999999999998874


Done!