RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy549
(253 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 116 bits (290), Expect = 5e-33
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+++++G + VGK+ ++ +F D F S + T+ + DG ++ L I DT+G +
Sbjct: 8 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 67
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F + A +LVY + + ++D +++ I V +++GNKC++ K
Sbjct: 68 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKR 127
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQYN 215
+ D+ F+E SAK N N+ F L K + +
Sbjct: 128 QVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD 172
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 112 bits (281), Expect = 1e-31
Identities = 39/161 (24%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+++++G + VGKS ++ +F+ D+F + T+ + + +G ++ L I DT+G +
Sbjct: 4 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQER 63
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F + A +LVY + D T+ +K + + +++VGNK ++E +
Sbjct: 64 FRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRV 123
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
V + E +A + F+E SAK + N+ ++F L +
Sbjct: 124 VTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAKLIQ 163
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 111 bits (278), Expect = 4e-31
Identities = 38/161 (23%), Positives = 73/161 (45%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+VV++G + VGKS+++S+F + F K T+ DG + I DT+G +
Sbjct: 6 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 65
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
+ + A +LVY + T++ V+ +++ + + I++VGNK +L
Sbjct: 66 YRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 125
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
F+E SA ++ N+ + FK +L +
Sbjct: 126 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIY 166
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 111 bits (277), Expect = 5e-31
Identities = 36/160 (22%), Positives = 75/160 (46%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
++V++G A VGK+ ++ +F F T+ + +G ++ L I DT+G +
Sbjct: 7 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 66
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F ++ + +A+A +L Y + ++ + + +I V V+VGNK +L +
Sbjct: 67 FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 126
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQA 210
+ ++E SAKE+ N+ ++F +L +
Sbjct: 127 EVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 166
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 105 bits (263), Expect = 4e-29
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+ +++G VGKS ++ QF +F++ T+ G ++ L I DT+G +
Sbjct: 6 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 65
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F A+ A ++VY + ST++ + N I+++GNK +LE +
Sbjct: 66 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQR 125
Query: 171 VR-REIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
E A+ A + F+E SAK N+ F E +
Sbjct: 126 DVTYEEAKQFA-EENGLLFLEASAKTGENVEDAFLEAAKK 164
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 105 bits (262), Expect = 6e-29
Identities = 43/159 (27%), Positives = 81/159 (50%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
++V +G VGK+S+I++F+YD F + Y+ T+ + + + L + DT+G +
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 61
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F ++ I + A V+VY + + +++ + + +RG V I++VGNK +L K
Sbjct: 62 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 121
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
+ F+E SAK YN+ Q+F+ + A
Sbjct: 122 QVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAA 160
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 106 bits (264), Expect = 7e-29
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+++++G + VGKS ++ +F D + + Y T+ + + DG + L I DT+G +
Sbjct: 8 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 67
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F + + ++VY V D +++ VK ++I V ++VGNKC+L+ K
Sbjct: 68 FRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKR 127
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
V + F+E SA ++ N+ F + Q K
Sbjct: 128 VVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIK 168
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 104 bits (261), Expect = 1e-28
Identities = 39/159 (24%), Positives = 77/159 (48%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+++++G + VGK+S + ++ D F + TV + + + ++ L I DT+G +
Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
+ + A F+L+Y + + +++ V+D QI +++VGNKC++E +
Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER 126
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
V F E SAK+N N+ Q F+ L+
Sbjct: 127 VVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDV 165
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 104 bits (259), Expect = 2e-28
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+ +++G VGKS ++ QF RF + T+ DG Q+ L I DT+G
Sbjct: 5 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 64
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F ++ A +LVY + T++ + E + I+++GNK +LE +
Sbjct: 65 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRR 124
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
+ + F+E SAK N+ + F +
Sbjct: 125 DVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 163
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 103 bits (258), Expect = 3e-28
Identities = 33/161 (20%), Positives = 67/161 (41%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+ +V+G A GKS ++ QF+ +F T+ + G + L I DT+G +
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 66
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F ++ A +LVY + T++ + + + I++ GNK +L+
Sbjct: 67 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADR 126
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
+ + + + F+E SA N+ + F + +
Sbjct: 127 EVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKIL 167
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 100 bits (250), Expect = 4e-27
Identities = 50/162 (30%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+V+++G VGKS++ QF+YD F+ Y+ T + +R + DG ++ +DILDT+G
Sbjct: 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGQED 64
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL-MVPIVVVGNKCELEFK 169
+ A+R+ + + F+ V+++ + ++ D REQI+ + VP ++VGNK +LE K
Sbjct: 65 YAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDK 124
Query: 170 DVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
W +VE SAK N+ +VF +L+ + +
Sbjct: 125 RQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIR 166
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 100 bits (249), Expect = 6e-27
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 3/163 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFIS-RYKETVEELHRGEYELPDGAQLTLDILDTSGAY 109
+V+++G + VGK+ ++ +F F++ + TV R + DG ++ L + DT+G
Sbjct: 8 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 67
Query: 110 QFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFK 169
+F ++ A A +L+Y V + +++D ++ +I V ++++GNK + +
Sbjct: 68 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHE 127
Query: 170 D-VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
V+RE E +A ++ F+E SAK N+ F + + K
Sbjct: 128 RVVKREDGEKLA-KEYGLPFMETSAKTGLNVDLAFTAIAKELK 169
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 100 bits (249), Expect = 7e-27
Identities = 39/164 (23%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+V+++G VGKSS++++++ ++F ++ T+ + DG +T+ I DT+G +
Sbjct: 8 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 67
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVN----KRGLMVPIVVVGNKCEL 166
F ++R +D +L ++VDD+ ++ + + +++ + K P V++GNK ++
Sbjct: 68 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI 127
Query: 167 EFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQA 210
+ V E A+ + + E SAK+ N+ F+E + +
Sbjct: 128 SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 171
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 98.5 bits (244), Expect = 3e-26
Identities = 57/160 (35%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+VVV+G VGKS++ QF+ FI +Y T+E+ +R E E D + L+ILDT+G Q
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIE-VDSSPSVLEILDTAGTEQ 63
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL-MVPIVVVGNKCELEFK 169
F +MR+L I F+LVY++ + ++ +K +R+QI+ + VP+++VGNK +LE +
Sbjct: 64 FASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESE 123
Query: 170 DVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
+W C F+E SAK + ++F E++ Q
Sbjct: 124 REVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQ 163
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 98.4 bits (244), Expect = 5e-26
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+++++G + VGKSS++ +F D F T+ + + DG + L I DT+G +
Sbjct: 9 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 68
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPI-VVVGNKCELEFK 169
F + A +LVY V T+ + + ++ + ++VGNK + E +
Sbjct: 69 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENR 128
Query: 170 DVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
+V R A F+E SAK + F+EL+ +
Sbjct: 129 EVDRNEGLKFA-RKHSMLFIEASAKTCDGVQCAFEELVEK 167
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 96.6 bits (239), Expect = 2e-25
Identities = 37/159 (23%), Positives = 77/159 (48%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+VV++G VGK+S++ ++ ++F ++ T+ + G ++ L I DT+G +
Sbjct: 5 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQER 64
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F A+ + ++ +LVY + D ++ VK+ +++ G + + +VGNK +LE +
Sbjct: 65 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKER 124
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
SAK+N I ++F +L +
Sbjct: 125 HVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKR 163
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 95.9 bits (237), Expect = 4e-25
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 49 KRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGA 108
++VV+GG VGKS++ QF+ F+S Y T+E+ + DG LDILDT+G
Sbjct: 6 THKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICS-VDGIPARLDILDTAGQ 64
Query: 109 YQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL-MVPIVVVGNKCELE 167
+F AMRE + F+LV+A++D +++ V L QI+ + P+V+VGNK +LE
Sbjct: 65 EEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLE 124
Query: 168 FKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
+ + + E SAK N+ + F++L+ +
Sbjct: 125 SQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVR 168
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 95.7 bits (237), Expect = 5e-25
Identities = 31/172 (18%), Positives = 71/172 (41%), Gaps = 11/172 (6%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGE----------YELPDGAQLTL 100
+++ +G + VGK++ + ++ ++F ++ TV R + ++ L
Sbjct: 7 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 66
Query: 101 DILDTSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL-MVPIVV 159
+ DT+G +F ++ A F+L++ + ++ V++ Q+ IV+
Sbjct: 67 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 126
Query: 160 VGNKCELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
+GNK +L + E + + E SA N+ + + LL
Sbjct: 127 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 178
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 95.1 bits (235), Expect = 1e-24
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+ VV+G VGK+ ++ + ++F S Y TV + + G TL + DT+G
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQED 63
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
+ +R LS D F++ ++V S+++ VK+ + P ++VG + +L
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123
Query: 171 V-------------RREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQA 210
E AE +A +VECSA + VF E + A
Sbjct: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 92.7 bits (229), Expect = 4e-24
Identities = 49/162 (30%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
++VV+G VGKS++ Q + + F+ Y T+E+ +R + + LDILDT+G +
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETC-LLDILDTAGQEE 63
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL-MVPIVVVGNKCELEFK 169
+ AMR+ + T + F+ V+A+++ +++ + REQI + VP+V+VGNKC+L +
Sbjct: 64 YSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAAR 123
Query: 170 DVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
V A+ +A + ++E SAK + F L+ + +
Sbjct: 124 TVESRQAQDLA-RSYGIPYIETSAKTRQGVEDAFYTLVREIR 164
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 92.7 bits (229), Expect = 5e-24
Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
RV V G VGKSS++ +F+ F Y TVE+ +R DT+G++Q
Sbjct: 4 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT-DTTGSHQ 62
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLM--VPIVVVGNKCELEF 168
FPAM+ LSIS AF+LVY++ + + +K + EQI +G + +PI++VGNKC+
Sbjct: 63 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESP 122
Query: 169 KDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQYNLSPAVRRRRQSL 227
+ W+C F+E SAK N+N+ ++F+ELL K RR SL
Sbjct: 123 SREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEK----------RRTVSL 171
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 92.8 bits (229), Expect = 8e-24
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 14/173 (8%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+ VV+G VGK+ ++ + + F Y TV + + DG + L + DT+G
Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPVNLGLWDTAGQED 65
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
+ +R LS D ++ +++ ++++ V+ V PI++VG K +L
Sbjct: 66 YDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 125
Query: 171 VRRE-------------IAETIALYDWQCGFVECSAKENYNIVQVFKELLAQA 210
E +A ++ECSA + VF E +
Sbjct: 126 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 178
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 91.2 bits (225), Expect = 2e-23
Identities = 39/161 (24%), Positives = 68/161 (42%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+V ++G VGKSSI+ +F+ D F T+ + I DT+G +
Sbjct: 6 KVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLER 65
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F A+ + + A ++VY + T+ +K+ ++ + + + GNKC+L
Sbjct: 66 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVR 125
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
E FVE SAK NI ++F E+ +
Sbjct: 126 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 166
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 91.7 bits (226), Expect = 2e-23
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+V+++G + VGK+S+++Q++ +F ++YK T+ + + D +T+ I DT+G +
Sbjct: 4 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 63
Query: 111 FPAMRELSISTADAFVLVYAVDD----ASTWDVVKDLREQIVNKRGLMVPIVVVGNKCEL 166
F ++ AD VLV+ V + + Q + P VV+GNK +L
Sbjct: 64 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 123
Query: 167 EFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQ 213
E + V + A+ + E SAKE N+ Q F+ + A Q
Sbjct: 124 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 170
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 91.3 bits (225), Expect = 2e-23
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
++V++G A VGKSSI+ +F+ + F + T+ + + + +I DT+G +
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F ++ + A A ++VY V ++ + +++ + + I +VGNK ++ +
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEG 124
Query: 171 VRREIAETIALY---DWQCGFVECSAKENYNIVQVFKELLAQ 209
R++A + F E SAK N+ VF + +
Sbjct: 125 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEK 166
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 90.5 bits (223), Expect = 4e-23
Identities = 34/159 (21%), Positives = 76/159 (47%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
++V++G + VGKSS++ +F+ +F + T+ + D + +I DT+G +
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 67
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
+ ++ + A A ++VY + + ++ K+ +++ + + I + GNK +L K
Sbjct: 68 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKR 127
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
D F+E SAK + N+ ++F + +
Sbjct: 128 AVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK 166
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 89.3 bits (220), Expect = 1e-22
Identities = 51/167 (30%), Positives = 93/167 (55%), Gaps = 2/167 (1%)
Query: 46 QKDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDT 105
++K R+VV+GG VGKS++ QF+ F++ Y T+E+ + + + D A DILDT
Sbjct: 2 MQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARL-DILDT 60
Query: 106 SGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL-MVPIVVVGNKC 164
+G +F AMRE + T + F+LV++V D +++ + + QI+ + P++++GNK
Sbjct: 61 AGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKA 120
Query: 165 ELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
+L+ + + + ++E SAK N+ Q F EL+ +
Sbjct: 121 DLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIR 167
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 87.4 bits (215), Expect = 5e-22
Identities = 62/161 (38%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
++VV+G VGKS++ QF+ F+ +Y T+E+ +R + E+ Q L+ILDT+G Q
Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQ-QCMLEILDTAGTEQ 63
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL-MVPIVVVGNKCELEFK 169
F AMR+L + F LVY++ ST++ ++DLREQI+ + VP+++VGNKC+LE +
Sbjct: 64 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDE 123
Query: 170 DVR-REIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
V +E + +A C F+E SAK N+ ++F +L+ Q
Sbjct: 124 RVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQ 164
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 84.3 bits (207), Expect = 1e-20
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+ VV+G VGK+ ++ + D F Y TV + + G Q L + DT+G
Sbjct: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYDTAGQED 69
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCEL---- 166
+ +R LS D F++ ++V + +++ VK+ + + VP +++G + +L
Sbjct: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129
Query: 167 ---------EFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQYNLS 217
+ K + E + +A C +VECSA + VF E + L+
Sbjct: 130 KTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI-----LT 184
Query: 218 P 218
P
Sbjct: 185 P 185
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 83.5 bits (205), Expect = 2e-20
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 49 KRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGA 108
++++V++G GK+ ++ D+F Y TV E + + E DG Q+ L + DT+G
Sbjct: 2 RKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIE-VDGKQVELALWDTAGL 60
Query: 109 YQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEF 168
+ +R LS D ++ +++D + + + + V VPI++VGNK +L
Sbjct: 61 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 120
Query: 169 KDVRR-------------EIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQA 210
+ R E +A G++ECSAK + +VF+ A
Sbjct: 121 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 175
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 83.2 bits (204), Expect = 2e-20
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 49 KRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGA 108
K ++VV+G ++ GK++++ F D F Y TV E + +E D ++ L + DTSG+
Sbjct: 2 KCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFE-IDTQRIELSLWDTSGS 60
Query: 109 YQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEF 168
+ +R LS +DA ++ + + T D V + + + +++VG K +L
Sbjct: 61 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 120
Query: 169 -------------KDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQ 213
V + +A ++ECSA ++ N V+ + A V
Sbjct: 121 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 178
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 82.4 bits (202), Expect = 3e-20
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+++V+G + VGK+ + +F RF R + T+ R DG ++ + + DT+G +
Sbjct: 4 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 63
Query: 111 F-PAMRELSISTADAFVLVYAVDDAST-WDVVKDLREQIVNKRGLMVPIVVVGNKCEL-E 167
F +M + A V VY + + ++ + + E + +P ++VGNKC+L
Sbjct: 64 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRS 123
Query: 168 FKDVRREIAETIALYDWQCGFVECSAK---ENYNIVQVFKEL 206
V ++A+ A E SAK +N ++ +F L
Sbjct: 124 AIQVPTDLAQKFA-DTHSMPLFETSAKNPNDNDHVEAIFMTL 164
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 82.0 bits (201), Expect = 6e-20
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQL-TLDILDTSGAY 109
+V+++G + VGK+S++ +++ D++ +YK T+ + DG ++ T+ + DT+G
Sbjct: 4 KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 63
Query: 110 QFPAMRELSISTADAFVLVYAVDDAST----WDVVKDLREQIVNKRGLMVPIVVVGNKCE 165
+F ++ AD VLVY V +AS+ + P V++GNK +
Sbjct: 64 RFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKID 123
Query: 166 LEFKDVRRE--IAETIALYDWQCGFVECSAKENYNIVQVFKELLAQA 210
E A+ +A SAK N+ F+E+ A
Sbjct: 124 AEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSA 170
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 82.0 bits (201), Expect = 6e-20
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
++VV+G VGKS++ QF F+ Y T+E+ ++ D LD+LDT+G +
Sbjct: 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIED-SYLKHTEIDNQWAILDVLDTAGQEE 64
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRG-LMVPIVVVGNKCELEFK 169
F AMRE + T D F++VY+V D ++++ V + I+ + P+++V NK +L
Sbjct: 65 FSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHL 124
Query: 170 DVRREIAETIALYDWQCGFVECSAKE-NYNIVQVFKELLAQAKVQ 213
+ ++E SAK+ N+ + F +L+ + Q
Sbjct: 125 RKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQ 169
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 80.9 bits (198), Expect = 1e-19
Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Query: 49 KRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGA 108
+ ++V++G GK++ + + L F +Y T+ + + ++ DT+G
Sbjct: 3 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 62
Query: 109 YQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEF 168
+F +R+ A ++++ V T+ V + +V +PIV+ GNK +++
Sbjct: 63 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV-CENIPIVLCGNKVDIKD 121
Query: 169 KDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQYNL 216
+ V+ + + + SAK NYN + F L + NL
Sbjct: 122 RKVKAKSIVFHR--KKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNL 167
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 80.5 bits (197), Expect = 2e-19
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
++VV+G VGKSS+I ++ F YK+T+ + + L + DT+G +
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F A+ + A A VLV++ D +++ + RE++V + G + +V L+
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLLDDSC 123
Query: 171 VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQA 210
++ E AE +A + F S KE+ N+ +VFK L +
Sbjct: 124 IKNEEAEGLA-KRLKLRFYRTSVKEDLNVSEVFKYLAEKH 162
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 79.0 bits (193), Expect = 7e-19
Identities = 46/167 (27%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 46 QKDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDT 105
Q R++ ++G VGKSS+ QF+ +F+ Y T+E +G + L ++DT
Sbjct: 1 QSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLIT-VNGQEYHLQLVDT 59
Query: 106 SGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLM-VPIVVVGNKC 164
+G ++ + + ++LVY+V +++V+K + ++++ G + +PI++VGNK
Sbjct: 60 AGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKK 119
Query: 165 ELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
+L + V W F+E SAKEN V VF+ ++ +A+
Sbjct: 120 DLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAE 166
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 77.4 bits (189), Expect = 3e-18
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 12/175 (6%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
++ + G A VGKS+++ +FL RFI Y T+E +R + D ++++ILDT+G
Sbjct: 4 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQAT-IDDEVVSMEILDTAGQED 62
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
++ D S +V+ K+ V +++VGNK +L+
Sbjct: 63 TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSR 122
Query: 171 VRREIAETIALYDWQCGFVECSAKENY-NIVQVFKELLAQAKVQYNLSPAVRRRR 224
+ C F ECSA NI ++F EL + VRRRR
Sbjct: 123 QVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCRE----------VRRRR 167
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 77.4 bits (189), Expect = 4e-18
Identities = 24/172 (13%), Positives = 62/172 (36%), Gaps = 9/172 (5%)
Query: 45 LQKDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILD 104
+ +V+++G GK++I+ QF + + E + D
Sbjct: 11 FNHQEHKVIIVGLDNAGKTTILYQFSMNEVV-----HTSPTIGSNVEEIVINNTRFLMWD 65
Query: 105 TSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLR-EQIVNKRGLMVPIVVVGNK 163
G + + + ++V D V ++ + + ++ +++ NK
Sbjct: 66 IGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANK 125
Query: 164 CELEFKDVRREIAETIALY---DWQCGFVECSAKENYNIVQVFKELLAQAKV 212
+++ EI++ + L D Q C A + Q + ++++ K+
Sbjct: 126 QDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLKI 177
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 76.9 bits (188), Expect = 5e-18
Identities = 24/169 (14%), Positives = 57/169 (33%), Gaps = 9/169 (5%)
Query: 47 KDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTS 106
+ R++++G GK++I+ + + ++ + Y+ + ++ D
Sbjct: 10 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYK-----NVKFNVWDVG 64
Query: 107 GAYQFPAMRELSISTADAFVLVYAVDD-ASTWDVVKDLREQIVNKRGLMVPIVVVGNKCE 165
G + + + + V D + ++L I ++ I++ NK +
Sbjct: 65 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 124
Query: 166 LEFKDVRREIAETIALY---DWQCGFVECSAKENYNIVQVFKELLAQAK 211
L EI E + L D A + + L + K
Sbjct: 125 LPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 173
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 76.7 bits (187), Expect = 6e-18
Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 3/168 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRF-ISRYKETVEELHRGEYELPDGAQLTLDILDTSGAY 109
RVV++G VGKS++ + F + E + E + DG T+ +LD
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 64
Query: 110 QFPAMRELSISTADAFVLVYAVDDAST--WDVVKDLREQIVNKRGLMVPIVVVGNKCELE 167
L+ + + ++ +PI++VGNK +L
Sbjct: 65 GENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLV 124
Query: 168 FKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQYN 215
+ C F+E SA +N+ ++F+ ++ Q +++ +
Sbjct: 125 RCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRD 172
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 75.0 bits (183), Expect = 3e-17
Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 7/163 (4%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
R+ V+G AR GKSS+I +FL + K E+ + + + + +
Sbjct: 7 RLGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYKKEMLVDGQTHLVLIREEAGAPDAK 66
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
F + I + + LR + + +VG + +
Sbjct: 67 FSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGL----ALALVGTQDRISASS 122
Query: 171 VR---REIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQA 210
R A + +C + E A N+ +VF+E+ +
Sbjct: 123 PRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKV 165
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 74.0 bits (180), Expect = 4e-17
Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 6/164 (3%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+ ++G GK++ ++ +F TV R + +L
Sbjct: 4 ELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQP---RF 60
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKD 170
+ +V A D +L + + +P++V+GNK +L
Sbjct: 61 RSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGAL 120
Query: 171 VRREIAETIALY---DWQCGFVECSAKENYNIVQVFKELLAQAK 211
+E+ E + L D + S KE NI + L+ +K
Sbjct: 121 DEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSK 164
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 73.1 bits (178), Expect = 9e-17
Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 9/163 (5%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
R++++G GK++I+ + ++ + EY+ ++ + D G +
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-----NISFTVWDVGGQDK 56
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL-MVPIVVVGNKCELEFK 169
+ + V +D + ++ +++ + L ++V NK +L
Sbjct: 57 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 116
Query: 170 DVRREIAETIALY---DWQCGFVECSAKENYNIVQVFKELLAQ 209
EI + + L+ A + + L Q
Sbjct: 117 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQ 159
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 71.5 bits (174), Expect = 6e-16
Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 9/174 (5%)
Query: 42 GVGLQKDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLD 101
+ + R++++G GK++I+ + ++ + Y+ L L+
Sbjct: 10 KLWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYK-----NLKLN 64
Query: 102 ILDTSGAYQFPAMRELSISTADAFVLVYAVDDAST-WDVVKDLREQIVNKRGLMVPIVVV 160
+ D G + A + V D K+L + + ++V
Sbjct: 65 VWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVF 124
Query: 161 GNKCELEFKDVRREIAETIALY---DWQCGFVECSAKENYNIVQVFKELLAQAK 211
NK + E+++ + L D V SA + I + L+ K
Sbjct: 125 ANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIK 178
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 70.4 bits (171), Expect = 1e-15
Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 9/167 (5%)
Query: 47 KDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTS 106
+ R++++G GK++++ Q + + + + L++ D
Sbjct: 14 DQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQ-----GFKLNVWDIG 68
Query: 107 GAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLM-VPIVVVGNKCE 165
G + D + V D ++ +++ + L VP+++ NK +
Sbjct: 69 GQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 128
Query: 166 LEFKDVRREIAETIALY---DWQCGFVECSAKENYNIVQVFKELLAQ 209
L EIAE + L+ D CSA + +
Sbjct: 129 LLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKN 175
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 65.9 bits (159), Expect = 8e-14
Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 19/181 (10%)
Query: 44 GLQKDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDIL 103
GL K ++V +G GK++++ DR + V LH EL
Sbjct: 8 GLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLG----QHVPTLHPTSEELTIAGMTFTTFD 63
Query: 104 DTSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNK 163
+ + LV D + ++L + ++ VPI+++GNK
Sbjct: 64 LGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNK 123
Query: 164 CELEFKDVRREIAETIALY---------------DWQCGFVECSAKENYNIVQVFKELLA 208
+ + E LY CS + + F+ +
Sbjct: 124 IDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQ 183
Query: 209 Q 209
Sbjct: 184 Y 184
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 65.5 bits (158), Expect = 8e-14
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+V+++G VGKS++ F E + DG + +L + D
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVED-GPEAEAAGHTYDRSIV-VDGEEASLMVYDIWEQDG 60
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLM-VPIVVVGNKCELEFK 169
+ ++ DA+V+VY+V D +++ +LR Q+ R VPI++VGNK +L
Sbjct: 61 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRS 120
Query: 170 DVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQYN 215
+ C F+E SA ++N+ +F+ ++ Q +++ +
Sbjct: 121 REVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRRD 166
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 63.6 bits (153), Expect = 3e-13
Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 9/165 (5%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
R++++G GK++I+ + + T E L + D G
Sbjct: 7 RILILGLDGAGKTTILYRLQVGEVV-----TTIPTIGFNVETVTYKNLKFQVWDLGGLTS 61
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVV-KDLREQIVNKRGLMVPIVVVGNKCELEFK 169
S DA + V D + +L + + +VV NK ++E
Sbjct: 62 IRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQA 121
Query: 170 DVRREIAETIA---LYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
E+A ++ L D + + SA + + + + L+ K
Sbjct: 122 MTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 166
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 62.4 bits (150), Expect = 8e-13
Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 17/170 (10%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+++ +G GK++++ DR T++ E + D G Q
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRL-----ATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 56
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLM-VPIVVVGNKCELEFK 169
+ + + V + D +D + + + N L VP V++GNK +
Sbjct: 57 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 116
Query: 170 DVRREIAETIALY----------DWQCGFVECSAKENYNIVQVFKELLAQ 209
E+ + L CS ++ F + L+Q
Sbjct: 117 VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAF-QWLSQ 165
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 62.0 bits (149), Expect = 1e-12
Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 9/165 (5%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
R++++G GK++I+ +F + +T+ + + L+I D G
Sbjct: 4 RLLMLGLDNAGKTTILKKFNGEDV-----DTISPTLGFNIKTLEHRGFKLNIWDVGGQKS 58
Query: 111 FPAMRELSISTADAFVLVYAVDDASTW-DVVKDLREQIVNKRGLMVPIVVVGNKCELEFK 169
+ + D + V D D ++L+ +V +R +++ NK +L
Sbjct: 59 LRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGA 118
Query: 170 DVRREIAETIALYDWQ---CGFVECSAKENYNIVQVFKELLAQAK 211
I E + L + CSA +++ LL
Sbjct: 119 LSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDIS 163
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 53.5 bits (127), Expect = 2e-09
Identities = 22/171 (12%), Positives = 52/171 (30%), Gaps = 3/171 (1%)
Query: 50 RRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAY 109
R V+ +G GK+ + + L ++ + + G LTL L +
Sbjct: 1 RAVLFVGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESL 60
Query: 110 QFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL---MVPIVVVGNKCEL 166
+F + S +V + V + Q++ +++ NK ++
Sbjct: 61 RFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDI 120
Query: 167 EFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQYNLS 217
+ I + + +A + L + ++ S
Sbjct: 121 AMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFS 171
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 50.8 bits (120), Expect = 2e-08
Identities = 27/183 (14%), Positives = 54/183 (29%), Gaps = 19/183 (10%)
Query: 49 KRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGA 108
+ +++ G GK+S+++ D + TV DG+ +TL
Sbjct: 3 QPSIIIAGPQNSGKTSLLTLLTTDSV----RPTVVSQEPLSAADYDGSGVTLVDFPGHVK 58
Query: 109 YQFPAMREL---SISTADAFVLVYAVDDASTWDVVKDLREQIV----NKRGLMVPIVVVG 161
++ L + +V + D + I+ + + I++
Sbjct: 59 LRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIAC 118
Query: 162 NKCELEFKD--------VRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQ 213
NK EL + EI + I VE E L + +
Sbjct: 119 NKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTLDVLQSTDGFK 178
Query: 214 YNL 216
+
Sbjct: 179 FAN 181
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 45.7 bits (107), Expect = 1e-06
Identities = 23/191 (12%), Positives = 43/191 (22%), Gaps = 46/191 (24%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+++++G GKS+I+ Q + + + D G
Sbjct: 4 KLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHF---------KMFDVGGQRS 54
Query: 111 FPAMRELSISTADAFVLVYAVDDASTWDVVK-----------DLREQIVNKRGLMVPIVV 159
A + A+ D NK I++
Sbjct: 55 ERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIIL 114
Query: 160 VGN-KCELEFKDVRREIA----ETIALYDWQCG---------------------FVECSA 193
N K E K + + E ++ A
Sbjct: 115 FLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCA 174
Query: 194 KENYNIVQVFK 204
+ N+ VF
Sbjct: 175 TDTKNVQFVFD 185
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 44.0 bits (103), Expect = 5e-06
Identities = 22/166 (13%), Positives = 49/166 (29%), Gaps = 20/166 (12%)
Query: 45 LQKDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILD 104
+ + R++++G GKS+I+ Q + + ++ + D
Sbjct: 2 VYRATHRLLLLGAGESGKSTIVKQMRILHVVLTSGIFETKF--------QVDKVNFHMFD 53
Query: 105 TSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKD----------LREQIVNKRGLM 154
G + A + V A + + L + I N R L
Sbjct: 54 VGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLR 113
Query: 155 -VPIVVVGNKCEL-EFKDVRREIAETIALYDWQCGFVECSAKENYN 198
+ +++ NK +L K + + ++ A
Sbjct: 114 TISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPG 159
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 43.0 bits (100), Expect = 1e-05
Identities = 26/187 (13%), Positives = 51/187 (27%), Gaps = 31/187 (16%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRF-----ISRYKETVEELHRGEYELPDGAQLTLDILDT 105
+++++G GKS+ I Q + + + G Q +
Sbjct: 4 KLLLLGTGESGKSTFIKQMRIIHGSGVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWI 63
Query: 106 SGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGN-KC 164
++ L + VLV + ++ + R I +++ N K
Sbjct: 64 HCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKD 123
Query: 165 ELEFKDVRREIAETIALY-------------------------DWQCGFVECSAKENYNI 199
LE K + + + Y D A + NI
Sbjct: 124 LLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENI 183
Query: 200 VQVFKEL 206
VF +
Sbjct: 184 RFVFAAV 190
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 42.3 bits (99), Expect = 2e-05
Identities = 35/181 (19%), Positives = 59/181 (32%), Gaps = 34/181 (18%)
Query: 52 VVVMGGARVGKSSIISQFLYDRFISRYKETV----------EELHRG--------EYELP 93
V +G GK+++ + Y V EE RG EYE
Sbjct: 6 VGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETA 65
Query: 94 DGAQLTLDILDTSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGL 153
+D G + + D +LV + D + RE I+ R +
Sbjct: 66 KR---HYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADG----PMPQTREHILLARQV 118
Query: 154 MVP-IVVVGNKCELE-----FKDVRREIAETIALYDW---QCGFVECSAKENYNIVQVFK 204
VP IVV NK ++ V E+ + + Y++ + + SA +
Sbjct: 119 GVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNP 178
Query: 205 E 205
+
Sbjct: 179 K 179
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 41.0 bits (95), Expect = 4e-05
Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 14/164 (8%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVE------ELHRGEYELPDGAQLTLDILD 104
+++++G GKS+ + Q R I T E+ +++ D +
Sbjct: 4 KILLLGAGESGKSTFLKQM---RIIHGQDPTKGIHEYDFEIKNVPFKMVDVGGQRSERKR 60
Query: 105 TSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLM-VPIVVVGNK 163
+ +S+++ ++ + ++ E IVN R V I++ NK
Sbjct: 61 WFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNK 120
Query: 164 C-ELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKEL 206
LE K I + G C +V+ F+
Sbjct: 121 TDLLEEKVQVVSIKDYFL---EFEGDPHCLRDVQKFLVECFRGK 161
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 40.8 bits (95), Expect = 5e-05
Identities = 28/170 (16%), Positives = 48/170 (28%), Gaps = 27/170 (15%)
Query: 52 VVVMGGARVGKSSIISQFLY---------DRFISRYKETVEELHRG-----EYELPDGAQ 97
V +G GK+++ + + EE RG + A
Sbjct: 6 VGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAA 65
Query: 98 LTLDILDTSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMV-P 156
D G + + D +LV A +D + RE ++ R + V
Sbjct: 66 RHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDG----PMPQTREHLLLARQIGVEH 121
Query: 157 IVVVGNKCELEFKDVR--------REIAETIALYDWQCGFVECSAKENYN 198
+VV NK + RE+ + + SA
Sbjct: 122 VVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEETPIIVGSALCALE 171
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 40.2 bits (92), Expect = 8e-05
Identities = 17/169 (10%), Positives = 50/169 (29%), Gaps = 10/169 (5%)
Query: 48 DKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSG 107
V G + GKSS ++ + ++R +T + +D+
Sbjct: 15 TGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGY 74
Query: 108 AYQFPAMREL----------SISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPI 157
A M+ + V++ + + + + + ++V +
Sbjct: 75 AEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLL 134
Query: 158 VVVGNKCELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKEL 206
K + E + ++ S+ + + ++ ++L
Sbjct: 135 TKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKL 183
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 39.7 bits (91), Expect = 1e-04
Identities = 28/174 (16%), Positives = 54/174 (31%), Gaps = 14/174 (8%)
Query: 47 KDKRRVVVMGGARVGKSSIISQFLYDR--FISRYKETVEELHRGEYELPD---------G 95
D +V ++G VGKS++ + L +S T + E + G
Sbjct: 6 TDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAG 65
Query: 96 AQLTLDILDTSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMV 155
+ + + SI AD V+V T + R +V
Sbjct: 66 LRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVV 125
Query: 156 PIVVV--GNKCELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELL 207
E + + + E + D+ + SA + +NI ++ +
Sbjct: 126 VFNKWDLVVHREKRYDEFTKLFREKLYFIDY-SPLIFTSADKGWNIDRMIDAMN 178
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 39.1 bits (90), Expect = 2e-04
Identities = 22/170 (12%), Positives = 51/170 (30%), Gaps = 13/170 (7%)
Query: 51 RVVVMGGARVGKSSIISQFL-YDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAY 109
V ++G VGKS+++S I+ Y T + G E DG + D G
Sbjct: 3 DVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFV--MADLPGLI 60
Query: 110 Q-FPAMRELSISTADA---------FVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVV 159
+ L + + ++ +D + +++ +
Sbjct: 61 EGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQ 120
Query: 160 VGNKCELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
+ +++ + + SA + ++ E+ Q
Sbjct: 121 IIVANKMDMPEAAENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQ 170
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 239
Score = 39.2 bits (91), Expect = 2e-04
Identities = 37/192 (19%), Positives = 65/192 (33%), Gaps = 42/192 (21%)
Query: 52 VVVMGGARVGKSSIISQFLYD------RFISRYKETVEELHRGE---YELPDGAQLTLD- 101
VVV+G GKS+ +Y R I ++++ EL +G + D + +
Sbjct: 9 VVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERER 68
Query: 102 -------------------ILDTSGAYQFPAMRELSISTADAFVLVYAVDDA---STWDV 139
++D G F S AD +L+ A +
Sbjct: 69 GITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISK 128
Query: 140 VKDLREQIVNKRGLMVP-IVVVGNKC------ELEFKDVRREIAETIALYDW---QCGFV 189
RE + L V ++V NK E F+++ +E + I + FV
Sbjct: 129 DGQTREHALLAFTLGVRQLIVAVNKMDSVKWDESRFQEIVKETSNFIKKVGYNPKTVPFV 188
Query: 190 ECSAKENYNIVQ 201
S N+++
Sbjct: 189 PISGWNGDNMIE 200
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 38.7 bits (89), Expect = 3e-04
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 44/194 (22%)
Query: 51 RVVVMGGARVGKSSIISQFLYD------------------------RFISRYKETVEELH 86
++V+G GKS+++ + L D +F EE
Sbjct: 5 NLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERE 64
Query: 87 RGEYELPDGAQLTLD-----ILDTSGAYQFPAMRELSISTADAFVLVYAVDD---ASTWD 138
RG + I+D G F S ADA +LV + +
Sbjct: 65 RGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMS 124
Query: 139 VVKDLREQIVNKRGLMVPIVVVGNKC---------ELEFKDVRREIAETIALYDWQCG-- 187
V RE I+ + + + ++V E +K++ ++++ + Y +
Sbjct: 125 VEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNKV 184
Query: 188 -FVECSAKENYNIV 200
FV A NI
Sbjct: 185 RFVPVVAPSGDNIT 198
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 37.8 bits (86), Expect = 4e-04
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 7/163 (4%)
Query: 52 VVVMGGARVGKSSIISQFLYDRF--ISRYKETVEELHRGEYELPD---GAQLTLDILDTS 106
V ++G VGKS++++ L + IS +T + RG T +
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPM 67
Query: 107 GAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCEL 166
A +E+ + AD +V+ VD +L + + VPI++VGNK +
Sbjct: 68 DALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDA 127
Query: 167 EFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
E + + SA + + ++ +LLA
Sbjct: 128 --AKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLAL 168
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 35.7 bits (81), Expect = 0.002
Identities = 27/165 (16%), Positives = 68/165 (41%), Gaps = 13/165 (7%)
Query: 51 RVVVMGGARVGKSSIISQFLYDR--FISRYKETVEELHRGEYELPDGAQLTLD----ILD 104
R+V++G VGKS+++++ L + ++ T ++ E + +D +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 105 TSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKC 164
T+ + + A ++++ +D +S D ++ + +R +VV NK
Sbjct: 62 TNDLVERLGIERTLQEIEKADIVLFVLDASSPLDE----EDRKILERIKNKRYLVVINKV 117
Query: 165 ELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
++ K EI + V+ SA + + ++ + + +
Sbjct: 118 DVVEKINEEEIKNKLGTDRH---MVKISALKGEGLEKLEESIYRE 159
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 35.5 bits (80), Expect = 0.003
Identities = 20/165 (12%), Positives = 55/165 (33%), Gaps = 9/165 (5%)
Query: 51 RVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQ 110
+ + G + VGKSS I+ + + ++R + + + + +D+ A
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKV 84
Query: 111 FPAMRELSISTADAF------VLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKC 164
+ RE + + + D + + +P++V+ K
Sbjct: 85 SKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKA 144
Query: 165 ELEFKDVRREIAETIAL---YDWQCGFVECSAKENYNIVQVFKEL 206
+ K + A+ + D + + S++ + + +
Sbjct: 145 DKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAI 189
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 35.4 bits (80), Expect = 0.003
Identities = 29/176 (16%), Positives = 54/176 (30%), Gaps = 20/176 (11%)
Query: 52 VVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQF 111
++ G + VGKS++I + + + V G +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKE 62
Query: 112 ---------PAMRELSISTADAFVLVYA------VDDASTWDVVKDLREQIVNK-RGLMV 155
E + D VLV + + + R L +
Sbjct: 63 VQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDI 122
Query: 156 PIVVVGNKCEL--EFKDVRREIAE--TIALYDWQCGFVECSAKENYNIVQVFKELL 207
P +V NK + ++V +AE + L + F+ SAK NI ++ +
Sbjct: 123 PTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRIF 178
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 34.7 bits (78), Expect = 0.005
Identities = 19/157 (12%), Positives = 37/157 (23%), Gaps = 3/157 (1%)
Query: 51 RVVVMGGARVGKSSIISQFL-YDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAY 109
+VV+ G GKSS+++ + I E+ DG L +
Sbjct: 3 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREA 62
Query: 110 QFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFK 169
R V + + + +
Sbjct: 63 SDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKA 122
Query: 170 DVRREIAETIALYDWQCGFVECSAKENYNIVQVFKEL 206
D+ E + + SA+ + + L
Sbjct: 123 DITGETLGMSEVNG--HALIRLSARTGEGVDVLRNHL 157
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 34.6 bits (78), Expect = 0.006
Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 13/170 (7%)
Query: 51 RVVVMGGARVGKSSIISQFL-YDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAY 109
V ++G GKSS+++ I+ Y T + G E+ + + T + D G
Sbjct: 3 DVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFT--LADIPGII 60
Query: 110 QFPAMRE-------LSISTADAFVLVYAVDDASTWDVVKDLREQIVNK-RGLMVPIVVVG 161
+ + + I+ + V D + +E L P +V
Sbjct: 61 EGASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVAL 120
Query: 162 NKCELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAK 211
NK +L ++ + +A+ +A + SA + + + L A +
Sbjct: 121 NKVDLLEEEAVKALADALAREGLAV--LPVSALTGAGLPALKEALHALVR 168
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 222
Score = 34.4 bits (78), Expect = 0.007
Identities = 37/196 (18%), Positives = 57/196 (29%), Gaps = 45/196 (22%)
Query: 46 QKDKRRVVVMGGARVGKSSIISQFLYD--------------------------RFISRYK 79
+K+ R + G GKS++I + L+D
Sbjct: 6 RKEMLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVD 65
Query: 80 ETVEELHRGE-----YELPDGAQLTLDILDTSGAYQFPAMRELSISTADAFVLVYAVDDA 134
E +G Y A+ I DT G Q+ ST D +++
Sbjct: 66 GLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILVD---- 121
Query: 135 STWDVVKDLREQIVNKRGLMVPIVVVGNKC----------ELEFKDVRREIAETIALYDW 184
+ + V R L + +VV K + AE IA
Sbjct: 122 ARYGVQTQTRRHSYIASLLGIKHIVVAINKMDLNGFDERVFESIKADYLKFAEGIAFKPT 181
Query: 185 QCGFVECSAKENYNIV 200
FV SA + N+V
Sbjct: 182 TMAFVPMSALKGDNVV 197
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 34.0 bits (76), Expect = 0.007
Identities = 22/161 (13%), Positives = 54/161 (33%), Gaps = 4/161 (2%)
Query: 52 VVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQF 111
V+++G VGKS++ ++ + + + ++ + + T ++DT G +
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKK-KAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDN 61
Query: 112 PAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKDV 171
P ++ D K + + V +
Sbjct: 62 PQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAEN 121
Query: 172 RREIAETIALYDWQCGF---VECSAKENYNIVQVFKELLAQ 209
RE + + GF + SA+ N N+ + + ++ +
Sbjct: 122 LREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKK 162
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 34.7 bits (79), Expect = 0.008
Identities = 25/169 (14%), Positives = 41/169 (24%), Gaps = 15/169 (8%)
Query: 45 LQKDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELH----RGEYELPDGAQLTL 100
+ V V G GKSS I+ + R Y+ P+ +
Sbjct: 52 IDSSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVF 111
Query: 101 DILDTSGA--YQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIV 158
D G FP L + + D+ + I +
Sbjct: 112 --WDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAI---SMMKKEFY 166
Query: 159 VVGNKC----ELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVF 203
V K E + + L D + V + +F
Sbjct: 167 FVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIF 215
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 33.2 bits (75), Expect = 0.023
Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 8/136 (5%)
Query: 74 FISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQFPAMRELSISTADAFVLVYAVDD 133
IS Y E +E + + DG ++++D+ G F + ++ D ++V +
Sbjct: 72 AISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIE 131
Query: 134 ASTWDVVKDLREQIVNKRGLMVPIVVVGNKCELE---FKDVRREIAETIALYDWQCGF-V 189
V + G + VVV NK + + + ++ +T A V
Sbjct: 132 ----GVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTVESVNVIV 187
Query: 190 ECSAKENYNIVQVFKE 205
A E VQV+
Sbjct: 188 STYADEVLGDVQVYPA 203
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 32.9 bits (74), Expect = 0.029
Identities = 27/198 (13%), Positives = 55/198 (27%), Gaps = 18/198 (9%)
Query: 47 KDKRRVVVMGGARVGKSSIISQFL-YDRFISRYKETVEELHRGEYELPDGAQL----TLD 101
+ ++VMG VGKSS ++ + ++ G L T
Sbjct: 30 VNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPG 89
Query: 102 ILDTSGAYQFP---AMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRG--LMVP 156
+++ L T D + V +D ++ K + + I + G +
Sbjct: 90 LIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNK 149
Query: 157 IVVVGNKCELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQAKVQYNL 216
+V + D + + + ++ + V
Sbjct: 150 AIVALTHAQFSPPD-----GLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIEN 204
Query: 217 SPAVRRRRQS---LPNYI 231
S + LPN I
Sbjct: 205 SGRCNKNDSDEKVLPNGI 222
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 31.8 bits (71), Expect = 0.043
Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 7/112 (6%)
Query: 100 LDILDTSGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVV 159
+ +D G A + D +LV A ++ + G+ +++
Sbjct: 88 ISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPF-PQPQTREHFVALGIIGVK-NLII 145
Query: 160 VGNKCELEFKDVRREIAETIALYDWQCG-----FVECSAKENYNIVQVFKEL 206
V NK ++ K+ I + + SA NI + + +
Sbjct: 146 VQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGI 197
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 31.2 bits (69), Expect = 0.076
Identities = 24/164 (14%), Positives = 59/164 (35%), Gaps = 8/164 (4%)
Query: 52 VVVMGGARVGKSSIISQFLYDRF--ISRYKETVEELHRGEYELPDGAQLTLD----ILDT 105
+ ++G VGKS+++++ L + SR +T G + + +D ++
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 106 SGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCE 165
A + S S D ++++ V+ + + ++ + I+ V
Sbjct: 68 KRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGK--APVILAVNKVDN 125
Query: 166 LEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
++ K + +A V SA+ N+ + +
Sbjct: 126 VQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKH 169
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 29.7 bits (65), Expect = 0.27
Identities = 20/161 (12%), Positives = 40/161 (24%), Gaps = 16/161 (9%)
Query: 52 VVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQF 111
V V+G GK++++ SR + + H G E+P +
Sbjct: 8 VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQ-HIGATEIPMDVIEGICGDFLKKFSIR 66
Query: 112 PAMRELSISTADAFV--------------LVYAVDDASTWDVVKDLREQIVNKRGLMVPI 157
+ L L + D + + + + +
Sbjct: 67 ETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFV 126
Query: 158 VVVGNKCELEFKDVRREIAETIALYDWQCGFVECSAKENYN 198
V NK + E + + Q V+
Sbjct: 127 VAA-NKIDRIHGWRVHEGRPFMETFSKQDIQVQQKLDTKVY 166
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 29.3 bits (65), Expect = 0.34
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 155 VPIVVVGNKCELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKEL 206
+ V+V NK +L +D R++ E +Y V+ SAK I ++ + L
Sbjct: 42 LETVMVINKMDLYDEDDLRKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYL 93
>d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 205
Score = 28.3 bits (63), Expect = 0.62
Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 20/101 (19%)
Query: 67 SQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQFPAMRELSISTADAFV 126
+ L+D +S + ++ + +P G + FP ++ S+ +
Sbjct: 106 GEELFDHIVSCISDFLDYMGIKGPRMPLGF-----------TFSFP-CQQTSLDAG---I 150
Query: 127 LV-----YAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGN 162
L+ + D DVV LR+ I + + +V V N
Sbjct: 151 LITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVN 191
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 28.1 bits (62), Expect = 1.0
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 45 LQKDKRRVVV---MGGARVGKSSIISQFLYDRFISRYKETVEELHRG----EYELPDGAQ 97
L + +VV +G R GKS ++++ + TV+ +G P
Sbjct: 25 LSAITQPMVVVAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPKKPG 84
Query: 98 LTLDILDTSG 107
L +LDT G
Sbjct: 85 HILVLLDTEG 94
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 28.2 bits (61), Expect = 1.1
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 45 LQKDKRRVVVMGGARVGKSSIISQFL 70
+V+G R GKSSII +
Sbjct: 25 KGLRAPITLVLGLRRTGKSSIIKIGI 50
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.7 bits (60), Expect = 1.2
Identities = 20/170 (11%), Positives = 49/170 (28%), Gaps = 10/170 (5%)
Query: 50 RRVVVMGGARVGKSSII---SQFLYDRFISRY-KETVEELHRGEYELPDGAQLTLDILDT 105
+ V ++GG GKS ++ + Y +E V E G+ + + L
Sbjct: 8 KTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGH 67
Query: 106 SGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCE 165
+ I+ D + + ++ + V I++ N
Sbjct: 68 QRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEW 127
Query: 166 LEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQV----FKELLAQAK 211
++ + + + K +++ + + Q K
Sbjct: 128 VDDGLRSLGSQKQRQQFQQL--LKKLLDKYKVPYIEIESPSYLDRYNQVK 175
>d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 205
Score = 27.1 bits (60), Expect = 1.5
Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 20/101 (19%)
Query: 67 SQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQFPAMRELSISTADAFV 126
++ L+D + +++ +LP G + FP +R I +
Sbjct: 106 AEMLFDYISECISDFLDKHQMKHKKLPLGF-----------TFSFP-VRHEDIDKG---I 150
Query: 127 LV-----YAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGN 162
L+ + A +VV LR+ I + + +V + N
Sbjct: 151 LLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 191
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 27.3 bits (59), Expect = 1.6
Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 3/129 (2%)
Query: 49 KRRVVVMGGARVGKSSI---ISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDT 105
R +++ GG+ GKS I + L + +++ +++ E + + +G
Sbjct: 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGV 62
Query: 106 SGAYQFPAMRELSISTADAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNKCE 165
S +F A+ A A + ++ + ++ VG +C+
Sbjct: 63 SIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWVGVRCD 122
Query: 166 LEFKDVRRE 174
+ R
Sbjct: 123 GAVAEGRET 131
>d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.6 bits (57), Expect = 2.2
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 162 NKCELEFKDVRREIAETIALYDWQCGFVECSAKENYNIVQVFKELLAQ 209
+C V +I Y + G + S++E + + ++ KE L +
Sbjct: 118 CRCSSMHFLVAEWNEPSINFYK-RRGASDLSSEEGWRLFKIDKEYLLK 164
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 26.6 bits (57), Expect = 2.3
Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 48 DKRRVVVMGGARVGKSSI---ISQFLYDRFISRYKETVEELHRGEYELPD 94
+KR + ++G GKS+I ++Q L F +E + + D
Sbjct: 1 EKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFD 50
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG
{Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 195
Score = 26.8 bits (58), Expect = 2.4
Identities = 9/48 (18%), Positives = 20/48 (41%)
Query: 197 YNIVQVFKELLAQAKVQYNLSPAVRRRRQSLPNYIGTTGSASSKGRYM 244
YNI Q+ EL + V N +++ + P+ + + + +
Sbjct: 15 YNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEKRE 62
>d1r8ja2 c.23.1.5 (A:1-135) N-terminal domain of the circadian clock
protein KaiA {Synechococcus elongatus [TaxId: 32046]}
Length = 135
Score = 25.9 bits (57), Expect = 2.8
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Query: 123 DAFVLVYAVDDASTWDVVKDLREQIVNKRGLMVPIVVVGNK 163
D +LV + S VV+ L + G++VP +VVG++
Sbjct: 52 DCLILV--AANPSFRAVVQQLCFE-----GVVVPAIVVGDR 85
>d1ze3h1 b.2.3.2 (H:159-279) Mannose-specific adhesin FimH
{Escherichia coli [TaxId: 562]}
Length = 121
Score = 25.7 bits (56), Expect = 3.7
Identities = 11/81 (13%), Positives = 24/81 (29%), Gaps = 11/81 (13%)
Query: 31 LGTESTSSSGTGVGLQ-KDKRRVVVMGGARVGKSSIISQFLYDRFISRYKETVEELHRGE 89
++ S GVG+Q ++ + S + Y T ++ G
Sbjct: 51 FTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLG-LTANYARTGGQVTAGN 109
Query: 90 YELPDGAQLTLDILDTSGAYQ 110
+ + + + YQ
Sbjct: 110 VQ----SIIGVTF-----VYQ 121
>d1iu8a_ c.56.4.1 (A:) Pyrrolidone carboxyl peptidase (pyroglutamate
aminopeptidase) {Archaeon Pyrococcus horikoshii [TaxId:
53953]}
Length = 206
Score = 26.1 bits (57), Expect = 3.9
Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 9/51 (17%)
Query: 135 STWDVVKDLREQIVNKRGLMVPIVVVGNKCELEFKDVRREIAETIALYDWQ 185
T D+V+ L E+I G ++P+ FK R ++ + +
Sbjct: 18 PTMDIVEALSERIPEVVGEILPVS---------FKRAREKLLKVLDDVRPD 59
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M
protein {Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 425
Score = 26.5 bits (57), Expect = 4.0
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 54 VMGGARVGKSSIISQFLYDRFISRYKETVEELHRGEYELPDGAQLTLDILDTSGAYQFPA 113
+ G +G + I+Q Y F+ E VE E +P G Q D++ G
Sbjct: 13 TLAGQGIGFTDYITQLTYLLFLKMDAENVEMFGE-ESAIPTGYQWA-DLIAFDGLDLVKQ 70
Query: 114 MREL 117
E
Sbjct: 71 YEET 74
>d1kxla_ b.40.4.3 (A:) CDC13 ssDNA-binding domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 187
Score = 25.2 bits (55), Expect = 6.0
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 62 KSSIISQFLYDRFISRYKETVEE 84
K+ I+ +LYDR++ Y+ +E
Sbjct: 50 KNDIVQNYLYDRYLIDYENKLEL 72
>d1fc6a4 c.14.1.2 (A:78-156,A:249-463) Photosystem II D1 C-terminal
processing protease {Algae (Scenedesmus obliquus)
[TaxId: 3088]}
Length = 294
Score = 25.5 bits (55), Expect = 6.6
Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 9/85 (10%)
Query: 13 QTDYRKMPGACERLRLHSLGTESTSSSGTGVGLQ-KDKRRVVVMGGARVGKSSIISQF-L 70
L L T+S+ + KD +R ++ G GK I + L
Sbjct: 178 DIYSADGNSIDSATPLVVLVNRGTASASEVLAGALKDSKRGLIAGERTFGKGLIQTVVDL 237
Query: 71 YDRFISRYKETVEELHRGEYELPDG 95
D S TV Y+ P G
Sbjct: 238 SDG--SGVAVTV-----ARYQTPAG 255
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 25.2 bits (54), Expect = 7.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 42 GVGLQKDKRRVVVMGGARVGKSSIISQFLYDRF 74
G D ++ V+GG GKSS++ F+ F
Sbjct: 19 GQNADLDLPQIAVVGGQSAGKSSVLENFVGRDF 51
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia
coli [TaxId: 562]}
Length = 235
Score = 25.1 bits (54), Expect = 8.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 49 KRRVVVMGGARVGKSSIISQF 69
K RV+V+ GA + S I F
Sbjct: 1 KPRVLVLTGAGISAESGIRTF 21
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 24.9 bits (53), Expect = 8.4
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 146 QIVNKRGLMVPIVVVGNKCELEFKDVRREIAETIALYDW-QCGFVECSAKENYNIVQVFK 204
QI+ ++ +++ + + + + R+I E I + SA NI + K
Sbjct: 128 QIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVK 187
Query: 205 EL 206
+
Sbjct: 188 AI 189
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 25.2 bits (54), Expect = 8.7
Identities = 35/202 (17%), Positives = 59/202 (29%), Gaps = 46/202 (22%)
Query: 47 KDKRRVVVMGGARVGKSSIISQFLYD------------------------RFISRYKETV 82
K+ +V +G GKS++ L+ T
Sbjct: 22 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 81
Query: 83 EELHRGE-----YELPDGAQLTLDILDTSGAYQFPAMRELSISTADAFVLVYAVDDA--- 134
EE +G+ + +LD G + S AD VLV +
Sbjct: 82 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 141
Query: 135 STWDVVKDLREQIVNKRGLMVP-IVVVGNKCELEFKDVRRE-----------IAETIALY 182
+ ++ RE V R + +VVV NK + E +A Y
Sbjct: 142 AGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGY 201
Query: 183 DWQCG--FVECSAKENYNIVQV 202
+ + ++ SA N+
Sbjct: 202 NSKTDVKYMPVSAYTGQNVKDR 223
>d1i2ha_ b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 145
Score = 24.5 bits (53), Expect = 8.8
Identities = 6/24 (25%), Positives = 8/24 (33%)
Query: 114 MRELSISTADAFVLVYAVDDASTW 137
M E I + A V + W
Sbjct: 3 MGEQPIFSTRAHVFQIDPNTKKNW 26
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.133 0.381
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 921,411
Number of extensions: 41822
Number of successful extensions: 283
Number of sequences better than 10.0: 1
Number of HSP's gapped: 237
Number of HSP's successfully gapped: 101
Length of query: 253
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 170
Effective length of database: 1,268,006
Effective search space: 215561020
Effective search space used: 215561020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.5 bits)