Query psy5490
Match_columns 352
No_of_seqs 364 out of 4102
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 18:51:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5490.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5490hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 4.8E-38 1.7E-42 281.3 21.8 198 1-201 4-267 (282)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 7.7E-38 2.6E-42 276.7 18.7 197 1-201 5-232 (253)
3 4gpm_A Engineered protein OR26 100.0 1.3E-36 4.4E-41 252.4 20.1 158 28-189 6-166 (169)
4 1k1a_A B-cell lymphoma 3-encod 100.0 2.1E-36 7.1E-41 264.6 22.3 198 2-202 5-226 (241)
5 3aji_A 26S proteasome non-ATPa 100.0 5.3E-36 1.8E-40 260.7 21.5 197 1-201 1-214 (231)
6 3b7b_A Euchromatic histone-lys 100.0 9.6E-36 3.3E-40 260.0 22.8 197 1-201 6-219 (237)
7 2dzn_A Probable 26S proteasome 100.0 2.5E-36 8.5E-41 262.1 18.6 195 6-201 2-217 (228)
8 2xai_A ASB-9, ankyrin repeat a 100.0 8E-36 2.7E-40 265.0 22.0 190 5-199 2-206 (261)
9 1ikn_D Protein (I-kappa-B-alph 100.0 1.2E-36 4.2E-41 265.9 15.3 182 2-186 4-211 (236)
10 3d9h_A CDNA FLJ77766, highly s 100.0 1.5E-35 5E-40 266.8 22.0 193 2-199 55-262 (285)
11 2f8y_A Notch homolog 1, transl 100.0 5E-35 1.7E-39 253.1 24.2 182 2-186 21-218 (223)
12 2pnn_A Transient receptor pote 100.0 4.1E-36 1.4E-40 268.4 15.4 185 2-187 9-262 (273)
13 2rfa_A Transient receptor pote 100.0 5.3E-35 1.8E-39 254.6 21.0 181 5-186 2-224 (232)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 9.2E-35 3.1E-39 256.9 21.2 177 2-182 53-246 (253)
15 3aji_A 26S proteasome non-ATPa 100.0 6.6E-35 2.3E-39 253.7 20.0 179 2-184 36-230 (231)
16 3utm_A Tankyrase-1; tankyrase, 100.0 2.7E-34 9.1E-39 264.7 25.1 197 2-202 54-323 (351)
17 3hra_A Ankyrin repeat family p 100.0 2.3E-34 7.8E-39 244.9 22.2 176 3-182 2-201 (201)
18 4b93_B Ankyrin repeat domain-c 100.0 5.2E-36 1.8E-40 267.5 12.1 195 3-201 8-227 (269)
19 2fo1_E LIN-12 protein; beta-ba 100.0 1.2E-34 4.1E-39 270.8 21.1 195 4-201 123-355 (373)
20 4b93_B Ankyrin repeat domain-c 100.0 1.2E-35 4.2E-40 265.1 13.7 180 3-186 49-246 (269)
21 3kea_A K1L; tropism, ANK repea 100.0 1.5E-35 5E-40 266.9 13.1 184 2-190 27-226 (285)
22 2etb_A Transient receptor pote 100.0 3.7E-35 1.3E-39 259.7 14.7 180 5-185 1-247 (256)
23 1oy3_D Transcription factor in 100.0 2.6E-34 8.9E-39 257.0 19.8 181 19-200 2-233 (282)
24 3d9h_A CDNA FLJ77766, highly s 100.0 4.3E-34 1.5E-38 257.2 21.1 189 4-198 13-228 (285)
25 1wdy_A 2-5A-dependent ribonucl 100.0 2.9E-33 9.9E-38 250.1 24.8 193 3-199 36-260 (285)
26 3ljn_A Hypothetical protein; a 100.0 1.5E-34 5E-39 269.0 16.6 193 2-200 16-252 (364)
27 1n11_A Ankyrin; clathrin, BAND 100.0 1.7E-33 5.9E-38 268.0 23.9 196 2-201 175-386 (437)
28 3ljn_A Hypothetical protein; a 100.0 9.1E-35 3.1E-39 270.4 14.3 184 1-185 48-270 (364)
29 2f8y_A Notch homolog 1, transl 100.0 4.6E-33 1.6E-37 240.8 23.2 182 15-200 13-199 (223)
30 3jxi_A Vanilloid receptor-rela 100.0 8.7E-35 3E-39 257.7 12.5 182 3-185 2-251 (260)
31 2rfm_A Putative ankyrin repeat 100.0 8.4E-34 2.9E-38 240.1 17.3 160 19-182 28-190 (192)
32 1k1a_A B-cell lymphoma 3-encod 100.0 5.3E-34 1.8E-38 249.3 16.5 181 2-183 42-240 (241)
33 1wdy_A 2-5A-dependent ribonucl 100.0 1.2E-32 4E-37 246.1 24.9 178 15-195 27-222 (285)
34 2fo1_E LIN-12 protein; beta-ba 100.0 2E-33 6.7E-38 262.5 19.2 180 2-185 162-372 (373)
35 3utm_A Tankyrase-1; tankyrase, 100.0 2.6E-33 9E-38 258.0 19.4 196 3-201 21-289 (351)
36 1s70_B 130 kDa myosin-binding 100.0 1.2E-33 4.2E-38 255.2 16.8 193 4-199 38-272 (299)
37 1n11_A Ankyrin; clathrin, BAND 100.0 6.9E-33 2.4E-37 263.8 22.9 190 2-195 10-215 (437)
38 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.9E-33 9.9E-38 230.0 17.1 156 24-184 3-162 (162)
39 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.3E-33 2.1E-37 230.0 19.1 156 23-182 11-169 (169)
40 4g8k_A 2-5A-dependent ribonucl 100.0 3.9E-33 1.3E-37 256.6 19.6 157 24-186 166-328 (337)
41 3eu9_A Huntingtin-interacting 100.0 3.8E-33 1.3E-37 243.2 18.4 196 2-200 5-218 (240)
42 4gpm_A Engineered protein OR26 100.0 8.4E-33 2.9E-37 229.4 18.5 139 15-157 26-164 (169)
43 3v31_A Ankyrin repeat family A 100.0 7.1E-33 2.4E-37 229.0 17.5 157 25-185 2-161 (167)
44 3v30_A DNA-binding protein rfx 100.0 4.6E-33 1.6E-37 231.3 16.3 164 26-192 2-168 (172)
45 3eu9_A Huntingtin-interacting 100.0 1.7E-32 5.9E-37 239.0 20.7 182 2-186 38-237 (240)
46 3b7b_A Euchromatic histone-lys 100.0 3.4E-32 1.2E-36 237.5 22.0 180 17-200 2-185 (237)
47 4g8k_A 2-5A-dependent ribonucl 100.0 3E-32 1E-36 250.7 20.6 169 20-189 119-303 (337)
48 2xai_A ASB-9, ankyrin repeat a 100.0 4.8E-32 1.6E-36 240.6 21.0 168 25-198 2-172 (261)
49 2dzn_A Probable 26S proteasome 100.0 8.6E-33 2.9E-37 239.7 15.6 173 2-181 32-227 (228)
50 3kea_A K1L; tropism, ANK repea 100.0 6.7E-33 2.3E-37 249.5 15.2 174 16-195 21-197 (285)
51 2rfa_A Transient receptor pote 100.0 5.2E-32 1.8E-36 235.6 20.1 173 25-200 2-205 (232)
52 1awc_B Protein (GA binding pro 100.0 1E-31 3.5E-36 218.9 18.3 148 26-178 2-152 (153)
53 3f6q_A Integrin-linked protein 100.0 7.5E-32 2.6E-36 225.6 16.4 165 24-191 3-170 (179)
54 3twr_A Tankyrase-2; ankyrin re 100.0 4.2E-32 1.4E-36 223.9 14.0 158 22-183 4-164 (165)
55 1ikn_D Protein (I-kappa-B-alph 100.0 9.2E-33 3.2E-37 241.3 9.5 178 20-198 2-190 (236)
56 4hbd_A KN motif and ankyrin re 100.0 1.3E-31 4.4E-36 240.0 17.1 160 19-182 104-273 (276)
57 3hra_A Ankyrin repeat family p 100.0 9.9E-31 3.4E-35 222.4 20.9 175 23-201 2-187 (201)
58 1bd8_A P19INK4D CDK4/6 inhibit 100.0 7.1E-31 2.4E-35 214.3 17.1 150 26-181 2-155 (156)
59 2etb_A Transient receptor pote 100.0 3.5E-31 1.2E-35 234.1 13.0 176 25-200 1-229 (256)
60 2rfm_A Putative ankyrin repeat 100.0 1.6E-30 5.4E-35 219.9 16.5 148 1-152 30-190 (192)
61 2pnn_A Transient receptor pote 100.0 7.3E-31 2.5E-35 234.3 11.2 183 17-199 4-240 (273)
62 3v30_A DNA-binding protein rfx 100.0 6.4E-30 2.2E-34 212.2 14.5 148 6-157 2-163 (172)
63 1sw6_A Regulatory protein SWI6 100.0 1.6E-30 5.4E-35 238.6 11.8 172 15-196 119-320 (327)
64 1ycs_B 53BP2, P53BP2; ankyrin 100.0 7.2E-31 2.5E-35 230.1 9.1 161 23-188 2-168 (239)
65 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.7E-29 5.8E-34 207.4 16.5 146 4-154 3-162 (162)
66 1s70_B 130 kDa myosin-binding 100.0 5.3E-30 1.8E-34 231.3 14.7 174 23-200 37-240 (299)
67 1d9s_A Cyclin-dependent kinase 100.0 5.7E-30 1.9E-34 204.5 13.0 133 17-154 3-136 (136)
68 3twr_A Tankyrase-2; ankyrin re 100.0 2.5E-30 8.5E-35 213.2 10.5 148 1-153 3-164 (165)
69 3v31_A Ankyrin repeat family A 100.0 2.8E-29 9.7E-34 207.3 16.6 146 5-154 2-160 (167)
70 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.6E-29 1.6E-33 206.6 17.8 146 3-152 11-169 (169)
71 3jxi_A Vanilloid receptor-rela 100.0 6.9E-30 2.3E-34 226.2 12.1 178 23-200 2-233 (260)
72 2vge_A RELA-associated inhibit 100.0 2.9E-31 1E-35 231.2 1.7 166 13-184 5-178 (229)
73 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2E-30 6.7E-35 227.3 6.6 174 2-180 1-200 (239)
74 3f6q_A Integrin-linked protein 100.0 4.7E-29 1.6E-33 208.5 13.4 150 4-157 3-166 (179)
75 1awc_B Protein (GA binding pro 100.0 6.1E-29 2.1E-33 202.4 13.6 139 6-148 2-152 (153)
76 1d9s_A Cyclin-dependent kinase 100.0 7.6E-29 2.6E-33 197.9 12.8 128 55-184 5-136 (136)
77 3t8k_A Uncharacterized protein 100.0 1.4E-29 4.7E-34 213.4 7.0 152 26-183 6-178 (186)
78 4hbd_A KN motif and ankyrin re 100.0 4.2E-28 1.4E-32 217.1 16.0 148 1-152 106-273 (276)
79 1bd8_A P19INK4D CDK4/6 inhibit 100.0 6.1E-28 2.1E-32 196.8 15.5 140 6-151 2-155 (156)
80 1bi7_B P16INK4A, MTS1, multipl 100.0 8.8E-29 3E-33 202.3 10.4 140 20-164 6-149 (156)
81 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.8E-27 6E-32 186.4 16.3 126 25-154 1-126 (126)
82 2jab_A H10-2-G3; HER2, darpin, 100.0 7.8E-28 2.7E-32 192.0 14.5 126 23-152 11-136 (136)
83 2vge_A RELA-associated inhibit 100.0 2E-28 6.9E-33 213.2 10.5 148 42-190 1-154 (229)
84 1sw6_A Regulatory protein SWI6 99.9 1.3E-28 4.4E-33 225.8 8.8 157 2-170 127-327 (327)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.1E-27 2.8E-31 182.6 16.1 123 61-184 1-126 (126)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 5.7E-27 1.9E-31 187.0 14.6 123 59-182 11-136 (136)
87 1bi7_B P16INK4A, MTS1, multipl 99.9 9E-28 3.1E-32 196.2 10.1 137 57-195 7-147 (156)
88 3ui2_A Signal recognition part 99.9 3E-28 1E-32 214.1 5.2 160 6-184 15-185 (244)
89 3c5r_A BARD-1, BRCA1-associate 99.9 1.7E-27 5.9E-32 190.1 8.3 127 21-151 5-131 (137)
90 2aja_A Ankyrin repeat family p 99.9 3.8E-29 1.3E-33 232.8 -3.1 174 7-185 66-251 (376)
91 3deo_A Signal recognition part 99.9 7.3E-27 2.5E-31 196.1 10.2 140 23-181 41-181 (183)
92 3t8k_A Uncharacterized protein 99.9 7.5E-28 2.6E-32 202.7 3.9 147 6-156 6-181 (186)
93 3c5r_A BARD-1, BRCA1-associate 99.9 1.5E-26 5.1E-31 184.7 9.5 126 57-183 5-133 (137)
94 2aja_A Ankyrin repeat family p 99.9 3.6E-29 1.2E-33 233.0 -7.1 144 3-155 89-251 (376)
95 2b0o_E UPLC1; arfgap, structur 99.9 2.4E-26 8.1E-31 208.2 11.7 143 26-172 151-299 (301)
96 3ehr_A Osteoclast-stimulating 99.9 5.3E-27 1.8E-31 202.8 5.5 134 60-194 71-208 (222)
97 3aaa_C Myotrophin, protein V-1 99.9 1.4E-25 4.8E-30 175.6 10.2 112 23-138 4-115 (123)
98 3ehr_A Osteoclast-stimulating 99.9 1.4E-25 4.7E-30 193.9 8.6 131 23-157 70-201 (222)
99 3lvq_E ARF-GAP with SH3 domain 99.9 2.6E-24 8.9E-29 208.1 15.4 136 28-167 134-275 (497)
100 3aaa_C Myotrophin, protein V-1 99.9 1.3E-24 4.4E-29 170.1 10.5 114 59-173 4-120 (123)
101 1dcq_A PYK2-associated protein 99.9 1.8E-24 6E-29 193.7 12.6 125 60-185 128-264 (278)
102 3jue_A Arfgap with coiled-coil 99.9 2.5E-24 8.6E-29 199.6 13.8 145 21-169 194-347 (368)
103 1dcq_A PYK2-associated protein 99.9 4.6E-23 1.6E-27 184.5 16.1 126 28-154 132-263 (278)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.1E-23 1E-27 154.0 12.4 92 26-120 2-93 (93)
105 3lvq_E ARF-GAP with SH3 domain 99.9 7.2E-23 2.5E-27 198.0 17.1 135 62-197 132-278 (497)
106 3deo_A Signal recognition part 99.9 1.9E-24 6.7E-29 181.2 5.2 150 33-183 7-167 (183)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.4E-23 1.8E-27 152.7 12.1 93 61-154 1-93 (93)
108 3ui2_A Signal recognition part 99.9 2.1E-23 7.2E-28 183.1 9.0 130 4-154 43-185 (244)
109 2b0o_E UPLC1; arfgap, structur 99.9 1.5E-22 5.1E-27 183.2 14.2 122 62-184 151-284 (301)
110 3jue_A Arfgap with coiled-coil 99.9 1.7E-22 5.9E-27 187.2 13.6 124 60-184 197-326 (368)
111 2l6b_A NR1C; ankyrin, consensu 99.9 9.9E-23 3.4E-27 157.3 8.1 108 21-132 4-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.9 4.2E-22 1.4E-26 153.7 7.6 100 57-157 4-103 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 6.4E-20 2.2E-24 140.4 10.7 89 23-114 21-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 1.8E-19 6.2E-24 137.9 10.3 92 56-148 18-109 (110)
115 3mkq_B Coatomer subunit alpha; 88.6 1.8 6E-05 34.8 7.8 128 26-180 8-139 (177)
116 4g26_A Pentatricopeptide repea 84.2 3.1 0.00011 39.4 8.3 140 30-180 33-199 (501)
117 4g26_A Pentatricopeptide repea 57.2 32 0.0011 32.3 8.2 101 39-149 90-198 (501)
118 3zrh_A Ubiquitin thioesterase 56.0 26 0.00088 31.9 6.6 63 32-116 28-90 (454)
119 3zrh_A Ubiquitin thioesterase 50.6 41 0.0014 30.6 7.0 24 60-83 67-90 (454)
120 3h0g_A DNA-directed RNA polyme 45.1 4.5 0.00015 44.1 0.0 6 98-103 1402-1407(1752)
121 3h0g_A DNA-directed RNA polyme 42.6 5.2 0.00018 43.7 0.0 10 130-139 1400-1409(1752)
122 1gp8_A Protein (scaffolding pr 33.9 29 0.00098 19.8 2.1 17 163-179 17-33 (40)
123 3mkq_B Coatomer subunit alpha; 33.6 31 0.001 27.5 3.2 122 7-151 9-140 (177)
124 3mkq_A Coatomer beta'-subunit; 31.8 82 0.0028 30.8 6.8 37 132-173 742-779 (814)
125 2dkl_A Trinucleotide repeat co 25.9 48 0.0017 22.8 2.7 11 145-155 53-63 (85)
126 2h8h_A Proto-oncogene tyrosine 22.0 3.6 0.00012 39.2 -5.1 18 334-351 82-99 (535)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=4.8e-38 Score=281.32 Aligned_cols=198 Identities=27% Similarity=0.273 Sum_probs=172.1
Q ss_pred CCCCCCccHHHHHHcCCC----------------CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCCh
Q psy5490 1 MPTDSFESPLTLAACGGH----------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFES 64 (352)
Q Consensus 1 ~~~~~g~t~L~lA~~~~~----------------~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t 64 (352)
++|.+|+|+||+|+..|+ +|..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+|
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~g~t 80 (282)
T 1oy3_D 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV---LVAERGGHT 80 (282)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS---SCCCTTSCC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCC
Confidence 468999999999997664 5667889999999999999999999999999995 667789999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC-----------------------------------------------CCCcCCCCCh
Q psy5490 65 PLTLAACGGHVDLALLLIERGAN-----------------------------------------------IEEVNDEGYT 97 (352)
Q Consensus 65 ~Lh~A~~~g~~~~v~~Ll~~g~~-----------------------------------------------~~~~d~~G~t 97 (352)
|||+|+..|+.+++++|+++|++ ++.++..|+|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 99999999999999999998765 6778899999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHH
Q psy5490 98 PLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLEL 174 (352)
Q Consensus 98 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~ 174 (352)
|||+|+..|+.+++++|+++|++++...+..|+||||+|+..|+.+++++|+++|++++. .|+||||+|+..|+.++
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~ 240 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPIL 240 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHH
Confidence 999999999999999999999999986555699999999999999999999999999865 68999999999999999
Q ss_pred HHHHHHcCCCccccccccHHHHHHHhh
Q psy5490 175 VRYLLDSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 175 v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
+++|+++|++....+..+.+++.....
T Consensus 241 v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 241 ARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp HHHHHHTTCCCCCCC------------
T ss_pred HHHHHHcCCCcCcCCCcccccccccCC
Confidence 999999999999999888888765543
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7.7e-38 Score=276.71 Aligned_cols=197 Identities=32% Similarity=0.384 Sum_probs=163.6
Q ss_pred CCCCCCccHHHHHHcCC-------------CCCC--------------CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy5490 1 MPTDSFESPLTLAACGG-------------HVNM--------------PTDSFESPLTLAACGGHVDLALLLIERGANIE 53 (352)
Q Consensus 1 ~~~~~g~t~L~lA~~~~-------------~~n~--------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 53 (352)
++|.+|+|+||+|+..| +.++ .|..|+||||+|+..|+.+++++|+++|+++
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~- 83 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA- 83 (253)
T ss_dssp -----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-
Confidence 46889999999999866 3332 3788999999999999999999999999995
Q ss_pred CcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcH
Q psy5490 54 EVNMPTDSFESPLTLAACGGHVDLALLLIERGA-NIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETA 132 (352)
Q Consensus 54 ~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~ 132 (352)
+..+..|+||||+|+..|+.+++++|+++|. +++.++..|+||||+|+..|+.+++++|+++|++++. .+..|.||
T Consensus 84 --~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~ 160 (253)
T 1yyh_A 84 --NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSA 160 (253)
T ss_dssp --TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTC-BCTTSCBH
T ss_pred --CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCC-cCCCCCCH
Confidence 6667899999999999999999999999987 9999999999999999999999999999999999998 47789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHhh
Q psy5490 133 LTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 133 L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
||+|+..|+.+++++|+++|++++. .|+||||+|+..|+.+++++|+++|++....+..+.++.....+
T Consensus 161 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 232 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQE 232 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHH
Confidence 9999999999999999999999865 68999999999999999999999999999888888777665544
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.3e-36 Score=252.41 Aligned_cols=158 Identities=35% Similarity=0.506 Sum_probs=143.9
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCc
Q psy5490 28 SPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGH 107 (352)
Q Consensus 28 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~ 107 (352)
+.|+.||+.|++++|++||++|+|+ |.+|..|+||||+|+..++.+++++|+++|++++.+|.+|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv---n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV---NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCC
Confidence 5799999999999999999999995 6778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 108 EEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQ 184 (352)
Q Consensus 108 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 184 (352)
.++|++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++. .|+|||++|++.|+.+++++|+++||+
T Consensus 83 ~~~v~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 83 KEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp HHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred HHHHHHHHHCcCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 9999999999999998 477899999999999999999999999999855 789999999999999999999999998
Q ss_pred ccccc
Q psy5490 185 EMQTK 189 (352)
Q Consensus 185 ~~~~~ 189 (352)
.....
T Consensus 162 ie~~~ 166 (169)
T 4gpm_A 162 LEHHH 166 (169)
T ss_dssp -----
T ss_pred cCCCC
Confidence 76543
No 4
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.1e-36 Score=264.61 Aligned_cols=198 Identities=25% Similarity=0.317 Sum_probs=178.4
Q ss_pred CCCCCccHHHHHHcCCC-----------------CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCCh
Q psy5490 2 PTDSFESPLTLAACGGH-----------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFES 64 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~~-----------------~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t 64 (352)
+|.+|+|+||+||..|+ +|..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+|
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t 81 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP---MALDRHGQT 81 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc---cccCCCCCC
Confidence 58999999999997664 5666889999999999999999999999999995 556789999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcC
Q psy5490 65 PLTLAACGGHVDLALLLIERGA----NIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGG 140 (352)
Q Consensus 65 ~Lh~A~~~g~~~~v~~Ll~~g~----~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g 140 (352)
|||+|+..|+.+++++|++++. +++..|..|+||||+|+..|+.+++++|+++|++++......|.||||+|+..|
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC
Confidence 9999999999999999999987 889999999999999999999999999999999999865478999999999999
Q ss_pred CHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHhhH
Q psy5490 141 FLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQE 202 (352)
Q Consensus 141 ~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 202 (352)
+.+++++|+++|++++. .|+||||+|+..|+.+++++|+++|++....+..+.++.......
T Consensus 162 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 162 SLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhc
Confidence 99999999999999865 689999999999999999999999999988887776665554443
No 5
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.3e-36 Score=260.67 Aligned_cols=197 Identities=26% Similarity=0.366 Sum_probs=179.6
Q ss_pred CCCCCCccHHHHHHcCCCC--------------CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHH
Q psy5490 1 MPTDSFESPLTLAACGGHV--------------NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPL 66 (352)
Q Consensus 1 ~~~~~g~t~L~lA~~~~~~--------------n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~L 66 (352)
|.+..+.++||.|+..|++ +..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+|||
T Consensus 1 me~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L 77 (231)
T 3aji_A 1 MEGCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV---NDKDDAGWSPL 77 (231)
T ss_dssp --CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS---CCCCTTSCCHH
T ss_pred CCCccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC---CCcCCCCCCHH
Confidence 4567789999999988764 345889999999999999999999999999984 66778999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHH
Q psy5490 67 TLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVAD 146 (352)
Q Consensus 67 h~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 146 (352)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.++++
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~ 156 (231)
T 3aji_A 78 HIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA-KDHYDATAMHRAAAKGNLKMVH 156 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998 5777999999999999999999
Q ss_pred HHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHhh
Q psy5490 147 FLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 147 ~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
+|+++|++++. .|+||||+|+..|+.+++++|+++|++....+..+.++.....+
T Consensus 157 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 157 ILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred HHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 99999999865 68899999999999999999999999999888888777666543
No 6
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=9.6e-36 Score=260.04 Aligned_cols=197 Identities=26% Similarity=0.384 Sum_probs=181.0
Q ss_pred CCCCCCccHHHHHHcCC-------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHH
Q psy5490 1 MPTDSFESPLTLAACGG-------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLT 67 (352)
Q Consensus 1 ~~~~~g~t~L~lA~~~~-------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh 67 (352)
++|.+|+|+||+|+..| +++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~ 82 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV---DPKDAEGSTCLH 82 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC---CCCCTTSCCHHH
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC---CCCCCCCCcHHH
Confidence 46889999999999654 56677899999999999999999999999999985 566789999999
Q ss_pred HHHHcCCHHHHHHHHHcC-CCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHH
Q psy5490 68 LAACGGHVDLALLLIERG-ANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVAD 146 (352)
Q Consensus 68 ~A~~~g~~~~v~~Ll~~g-~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 146 (352)
+|+..|+.+++++|+++| .+++..+..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.++++
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI-RDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc-cCCCCCCHHHHHHHCCCHHHHH
Confidence 999999999999999998 89999999999999999999999999999999999998 5778999999999999999999
Q ss_pred HHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHhh
Q psy5490 147 FLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 147 ~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
+|+++|++++. .|.||||+|+..|+.+++++|+++|++....+..+.+++.....
T Consensus 162 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 219 (237)
T 3b7b_A 162 ILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASL 219 (237)
T ss_dssp HHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCT
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 99999999865 68999999999999999999999999999888888777765543
No 7
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.5e-36 Score=262.08 Aligned_cols=195 Identities=20% Similarity=0.249 Sum_probs=174.6
Q ss_pred CccHHHHHHcCCCCC--------------CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHH
Q psy5490 6 FESPLTLAACGGHVN--------------MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAAC 71 (352)
Q Consensus 6 g~t~L~lA~~~~~~n--------------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~ 71 (352)
|+|+||+|+..|+++ ..|..|+||||+|+..|+.+++++|+++|++++.....+..|+||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 789999999887743 358899999999999999999999999996654433477899999999999
Q ss_pred cCCHHHHHHHHHcC--CCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHH
Q psy5490 72 GGHVDLALLLIERG--ANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLL 149 (352)
Q Consensus 72 ~g~~~~v~~Ll~~g--~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 149 (352)
.|+.+++++|+++| ++++..+..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI-KDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999998 89999999999999999999999999999999999998 4778999999999999999999999
Q ss_pred HcC-CCCCC---CCCCHHHHHHHcCCHHHHHHHH-HcCCCccccccccHHHHHHHhh
Q psy5490 150 KNG-ANIEL---GASTPLMEAAQEGHLELVRYLL-DSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 150 ~~g-~~~~~---~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
++| ++++. .|+||||+|+..|+.+++++|+ ++|++....+..+.++.....+
T Consensus 161 ~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 161 GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp TTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred hcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 999 87654 7899999999999999999999 9999999888777666554433
No 8
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=8e-36 Score=265.04 Aligned_cols=190 Identities=32% Similarity=0.399 Sum_probs=172.0
Q ss_pred CCccHHHHHHcC-------------CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHH
Q psy5490 5 SFESPLTLAACG-------------GHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAAC 71 (352)
Q Consensus 5 ~g~t~L~lA~~~-------------~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~ 71 (352)
+|+|+||+|+.. .++|..|.+|.||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV---NGVTADWHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHH
Confidence 689999999964 467778999999999999999999999999999995 6677999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHc
Q psy5490 72 GGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKN 151 (352)
Q Consensus 72 ~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 151 (352)
.|+.+++++|+++|++++. +.+|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 156 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDH-KISHLGTPLYLACENQQRACVKKLLES 156 (261)
T ss_dssp HTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTTBCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 9999999999999999985 55699999999999999999999999999998 577799999999999999999999999
Q ss_pred CCCCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHH
Q psy5490 152 GANIEL--GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKR 199 (352)
Q Consensus 152 g~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~ 199 (352)
|++++. .|+||||+|+..|+.+++++|+++|++....+..+.++....
T Consensus 157 g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A 206 (261)
T 2xai_A 157 GADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELV 206 (261)
T ss_dssp TCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred CCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhc
Confidence 998865 688999999999999999999999999988887776665443
No 9
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.2e-36 Score=265.93 Aligned_cols=182 Identities=24% Similarity=0.232 Sum_probs=164.3
Q ss_pred CCCCCccHHHHHHcCCCC-----------------CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCCh
Q psy5490 2 PTDSFESPLTLAACGGHV-----------------NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFES 64 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~~~-----------------n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t 64 (352)
+|.+|+|+||+|+..|+. |..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+|
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t 80 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP---ELRDFRGNT 80 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS---CCCCTTCCC
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCC
Confidence 588999999999977654 455778999999999999999999999999995 667789999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHH
Q psy5490 65 PLTLAACGGHVDLALLLIERGAN------IEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACC 138 (352)
Q Consensus 65 ~Lh~A~~~g~~~~v~~Ll~~g~~------~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 138 (352)
|||+|+..|+.+++++|+++|.+ ++..+..|+||||+|+..|+.+++++|+++|++++......|.||||+|+.
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999876 567788999999999999999999999999999998544489999999999
Q ss_pred cCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy5490 139 GGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEM 186 (352)
Q Consensus 139 ~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 186 (352)
.|+.+++++|+++|++++. .|+|||++|+..|+.+++++|+++|++..
T Consensus 161 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 161 LQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp TTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred cCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9999999999999999865 68999999999999999999999999754
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=266.84 Aligned_cols=193 Identities=32% Similarity=0.409 Sum_probs=175.2
Q ss_pred CCCCCccHHHHHHcCCC-------------CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 2 PTDSFESPLTLAACGGH-------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~~-------------~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
+|.+|+|+||+|+..|+ +|..|.+|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~g~t~L~~ 131 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV---NGVTADWHTPLFN 131 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS---SCCCTTCCCHHHH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC---CCCCCCCCCHHHH
Confidence 47889999999997654 5666899999999999999999999999999994 6677999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHH
Q psy5490 69 AACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 148 (352)
|+..|+.++|++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|
T Consensus 132 A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~L 209 (285)
T 3d9h_A 132 ACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDH-KISHLGTPLYLACENQQRACVKKL 209 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTC-CBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHH
Confidence 999999999999999999998644 599999999999999999999999999998 577899999999999999999999
Q ss_pred HHcCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHH
Q psy5490 149 LKNGANIEL--GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKR 199 (352)
Q Consensus 149 l~~g~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~ 199 (352)
+++|++++. .|+||||+|+..|+.+++++|+++|++....+..+.+++...
T Consensus 210 l~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 262 (285)
T 3d9h_A 210 LESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELV 262 (285)
T ss_dssp HHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred HHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHh
Confidence 999998865 688999999999999999999999999988887776665544
No 11
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=5e-35 Score=253.13 Aligned_cols=182 Identities=26% Similarity=0.256 Sum_probs=155.1
Q ss_pred CCCCCccHHHHHHcCC-------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 2 PTDSFESPLTLAACGG-------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~-------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
.|.+|+|+||+|+..| +++..|..|+||||+|+..|+.+++++|++++... ++..+..|+||||+
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~~g~t~L~~ 98 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD--LDARMHDGTTPLIL 98 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSC--TTCCCTTCCCHHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCcHHHH
Confidence 3678899999998644 45666888899999999999999999999887721 45667888999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHH
Q psy5490 69 AACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 148 (352)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|
T Consensus 99 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~L 177 (223)
T 2f8y_A 99 AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM-QNNREETPLFLAAREGSYETAKVL 177 (223)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCcCHHHHHHHcCCHHHHHHH
Confidence 9999999999999999999998898999999999999999999999999999887 467788999999999999999999
Q ss_pred HHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy5490 149 LKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEM 186 (352)
Q Consensus 149 l~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 186 (352)
+++|++++. .|.|||++|++.++.+++++|+++|+...
T Consensus 178 l~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 178 LDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 999988754 67899999999999999999999888644
No 12
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=4.1e-36 Score=268.43 Aligned_cols=185 Identities=23% Similarity=0.234 Sum_probs=162.7
Q ss_pred CCCCCccHHHHHHcCCCCCCC---------------------CCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCC---
Q psy5490 2 PTDSFESPLTLAACGGHVNMP---------------------TDSFESPLTLAACG---GHVDLALLLIERGANIEE--- 54 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~~~n~~---------------------d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~--- 54 (352)
.|.+|+|+||.|+..|+++++ |..|+||||+|+.. |+.+++++|+++|+++..
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~ 88 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQ 88 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhH
Confidence 478999999999999987743 56899999999987 999999999999876432
Q ss_pred -cC----CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--------------CCChHHHHHHHcCcHHHHHHHH
Q psy5490 55 -VN----MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVND--------------EGYTPLMEAAREGHEEMVCVLL 115 (352)
Q Consensus 55 -~n----~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~--------------~G~t~L~~A~~~g~~~~v~~Ll 115 (352)
++ ..|..|+||||+|+..|+.++|++|+++|++++.++. .|+||||+|+..|+.+++++|+
T Consensus 89 ~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 168 (273)
T 2pnn_A 89 FVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLL 168 (273)
T ss_dssp HHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHH
T ss_pred HhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 12 2567899999999999999999999999999999987 7999999999999999999999
Q ss_pred h---cCCCcccccccccCcHHHHHHHcCC---------HHHHHHHHHcCCCC----------CCCCCCHHHHHHHcCCHH
Q psy5490 116 Q---KGAKINAHTEETQETALTLACCGGF---------LDVADFLLKNGANI----------ELGASTPLMEAAQEGHLE 173 (352)
Q Consensus 116 ~---~g~~~~~~~~~~g~t~L~~A~~~g~---------~~~v~~Ll~~g~~~----------~~~g~t~L~~A~~~~~~~ 173 (352)
+ +|++++. .+..|+||||+|+..|+ .+++++|+++|+++ |..|+||||+|+..|+.+
T Consensus 169 ~~~~~gad~~~-~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 169 QNSWQPADISA-RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp HCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred hcccCCCCcee-eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHH
Confidence 9 9999998 57789999999999998 89999999999876 447899999999999999
Q ss_pred HHHHHHHcCC-Cccc
Q psy5490 174 LVRYLLDSGA-QEMQ 187 (352)
Q Consensus 174 ~v~~Ll~~ga-~~~~ 187 (352)
+|++|+++|+ ++..
T Consensus 248 iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 248 VLAYILQREIHEPEC 262 (273)
T ss_dssp HHHHHHHHHTC----
T ss_pred HHHHHHHCCCCCchh
Confidence 9999999999 4443
No 13
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.3e-35 Score=254.64 Aligned_cols=181 Identities=27% Similarity=0.304 Sum_probs=162.9
Q ss_pred CCccHHHHHHcC--------------CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCCChHHHH
Q psy5490 5 SFESPLTLAACG--------------GHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEE--VNMPTDSFESPLTL 68 (352)
Q Consensus 5 ~g~t~L~lA~~~--------------~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~n~~~~~g~t~Lh~ 68 (352)
.|+|+||+|+.. .++|..|..|+||||+|+..|+.+++++|+++|+++.. .+..|..|+||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 589999999954 45677799999999999999999999999999987522 24567889999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCC-------------CCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHH
Q psy5490 69 AACGGHVDLALLLIERGANIEEVND-------------EGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTL 135 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d~-------------~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 135 (352)
|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++. .+..|+||||+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~ 160 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA-QDSLGNTVLHI 160 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHH
Confidence 9999999999999999999998765 799999999999999999999999999998 47789999999
Q ss_pred HHHcCCHHHH----HHHHHcCCCC---------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy5490 136 ACCGGFLDVA----DFLLKNGANI---------ELGASTPLMEAAQEGHLELVRYLLDSGAQEM 186 (352)
Q Consensus 136 A~~~g~~~~v----~~Ll~~g~~~---------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 186 (352)
|+..|+.+++ ++|+++|++. |..|+||||+|+..|+.+++++|+++|+...
T Consensus 161 A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 161 LILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred HHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 9999999988 9999999865 3478999999999999999999999987543
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=9.2e-35 Score=256.93 Aligned_cols=177 Identities=27% Similarity=0.268 Sum_probs=163.5
Q ss_pred CCCCCccHHHHHHcC-------------CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCCChHHH
Q psy5490 2 PTDSFESPLTLAACG-------------GHVNMPTDSFESPLTLAACGGHVDLALLLIERGA-NIEEVNMPTDSFESPLT 67 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~-------------~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~n~~~~~g~t~Lh 67 (352)
.|..|+|+||+|+.. .+++..|..|+||||+|+..|+.+++++|+++|. + ++..+..|+||||
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~g~t~L~ 129 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD---LDARMHDGTTPLI 129 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSC---TTCCCTTCCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---ccccCCCCCcHHH
Confidence 478899999999964 4567779999999999999999999999999987 5 4667789999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHH
Q psy5490 68 LAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADF 147 (352)
Q Consensus 68 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 147 (352)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~~~~~~v~~ 208 (253)
T 1yyh_A 130 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM-QNNREETPLFLAAREGSYETAKV 208 (253)
T ss_dssp HHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 47789999999999999999999
Q ss_pred HHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcC
Q psy5490 148 LLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSG 182 (352)
Q Consensus 148 Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g 182 (352)
|+++|++++. .|+|||++|++.|+.+|+++|.+..
T Consensus 209 Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 209 LLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 9999999865 6899999999999999999998653
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.6e-35 Score=253.72 Aligned_cols=179 Identities=30% Similarity=0.353 Sum_probs=167.1
Q ss_pred CCCCCccHHHHHHcC-------------CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 2 PTDSFESPLTLAACG-------------GHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~-------------~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
+|..|+|+||+|+.. .+++..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+
T Consensus 36 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~ 112 (231)
T 3aji_A 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV---NAVNQNGCTPLHY 112 (231)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC---CCCCCCCCCHHHH
Confidence 578999999999964 456777899999999999999999999999999995 5667899999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHH
Q psy5490 69 AACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 148 (352)
|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|
T Consensus 113 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~L 191 (231)
T 3aji_A 113 AASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI-QDTEGNTPLHLACDEERVEEAKFL 191 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc-cCCCCCCHHHHHHHCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 477899999999999999999999
Q ss_pred HHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 149 LKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQ 184 (352)
Q Consensus 149 l~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 184 (352)
+++|++++. .|.|||++|+..++.+++++|+++|++
T Consensus 192 l~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 192 VTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred HHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 999999865 689999999999999999999998875
No 16
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.7e-34 Score=264.66 Aligned_cols=197 Identities=28% Similarity=0.312 Sum_probs=174.7
Q ss_pred CCCCCccHHHHHHcCC-------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 2 PTDSFESPLTLAACGG-------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~-------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
+|..|+|+||+|+..| ++|..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+
T Consensus 54 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~---~~~~~~g~t~L~~ 130 (351)
T 3utm_A 54 SDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV---NAMDLWQFTPLHE 130 (351)
T ss_dssp SSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC---CCCCCCCCCHHHH
Confidence 4778999999999654 56777899999999999999999999999999985 5667889999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcC------------------------------------------------------CC
Q psy5490 69 AACGGHVDLALLLIERGANIEEVN------------------------------------------------------DE 94 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d------------------------------------------------------~~ 94 (352)
|+..|+.+++++|+++|++++..+ ..
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 210 (351)
T 3utm_A 131 AASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTT
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCC
Confidence 999999999999999999887654 45
Q ss_pred CChHHHHHHHc---CcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHH
Q psy5490 95 GYTPLMEAARE---GHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQ 168 (352)
Q Consensus 95 G~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~ 168 (352)
|.||||+|+.. +..+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. .|+||||+|+.
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRKGANVNE-KNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAAL 289 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHcCCCcCC-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 67899999988 668999999999999998 477899999999999999999999999999865 68999999999
Q ss_pred cCCHHHHHHHHHcCCCccccccccHHHHHHHhhH
Q psy5490 169 EGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQE 202 (352)
Q Consensus 169 ~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 202 (352)
.|+.++|++|+++|++....+..+.++.....+.
T Consensus 290 ~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~~~ 323 (351)
T 3utm_A 290 AGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEA 323 (351)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSCHH
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCCChhhhhhHH
Confidence 9999999999999999999888888777665443
No 17
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.3e-34 Score=244.93 Aligned_cols=176 Identities=26% Similarity=0.349 Sum_probs=161.5
Q ss_pred CCCCccHHHHHHcCC--------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 3 TDSFESPLTLAACGG--------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 3 ~~~g~t~L~lA~~~~--------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
+..+.|+||.|+..| ++|..|.+|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l~~ 78 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI---NLQNSISDSPYLY 78 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHH
Confidence 457899999999644 56777999999999999999999999999999995 5667899999999
Q ss_pred HHHcCCHHHHHHHH-HcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcC-CCcccccccccCcHHHHHHHcCC-----
Q psy5490 69 AACGGHVDLALLLI-ERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKG-AKINAHTEETQETALTLACCGGF----- 141 (352)
Q Consensus 69 A~~~g~~~~v~~Ll-~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~g~----- 141 (352)
|+..|+.+++++|+ ..+.+++..|..|.||||+|+..|+.+++++|+++| ++++. .+..|.||||+|+..++
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~~g~t~L~~A~~~~~~~~~~ 157 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF-QNDFGYTALIEAVGLREGNQLY 157 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC-CCTTSCCHHHHHHHSSCCSHHH
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC-CCCCCCCHHHHHHHhccchhhH
Confidence 99999999999999 567799999999999999999999999999999999 89988 57789999999999998
Q ss_pred HHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcC
Q psy5490 142 LDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSG 182 (352)
Q Consensus 142 ~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g 182 (352)
.+++++|+++|++++. .|+||||+|+..|+.+++++|+++|
T Consensus 158 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 158 QDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999999865 6889999999999999999999887
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=267.53 Aligned_cols=195 Identities=29% Similarity=0.359 Sum_probs=153.8
Q ss_pred CCCCccHHHHHHcCCCCCC---------------------CCCCCChHHHHHHHcCCH-HHHHHHHHcCCCCCCcCCCCC
Q psy5490 3 TDSFESPLTLAACGGHVNM---------------------PTDSFESPLTLAACGGHV-DLALLLIERGANIEEVNMPTD 60 (352)
Q Consensus 3 ~~~g~t~L~lA~~~~~~n~---------------------~d~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~n~~~~ 60 (352)
|..+.++|+.||..|++++ .+..|.|||++|+..++. .++++|++.|+++ |..|.
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv---n~~d~ 84 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV---NVTSQ 84 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT---TCCCT
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC---CCcCC
Confidence 5667899999999888543 356788999999998776 4889999999995 66779
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcC
Q psy5490 61 SFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGG 140 (352)
Q Consensus 61 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g 140 (352)
+|+||||+|+..|+.++|++|+++|++++.++..|.||||+|+..++.+++++|++.|++++. .+..|+||||+|+..|
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~-~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK-KDLSGNTPLIYACSGG 163 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCC
Confidence 999999999999999999999999999999999999999999999999999999999999998 4778999999999999
Q ss_pred CHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHhh
Q psy5490 141 FLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 141 ~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
+.+++++|+++|+++|. .|+||||+|+..|+.++|++|+++|++.+..+..+.+++....+
T Consensus 164 ~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 164 HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence 99999999999999865 68999999999999999999999999999888887777655543
No 19
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-34 Score=270.78 Aligned_cols=195 Identities=26% Similarity=0.327 Sum_probs=175.5
Q ss_pred CCCccHHHHHHcCCCC---------------------CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCC
Q psy5490 4 DSFESPLTLAACGGHV---------------------NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSF 62 (352)
Q Consensus 4 ~~g~t~L~lA~~~~~~---------------------n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g 62 (352)
..|+|+||+|+..|+. |..|..|+||||+|+..|+.++|++|+++|+++ +..+..|
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~---~~~~~~g 199 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP---TIYNKSE 199 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS---CCCCTTC
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC---cccCCCC
Confidence 6899999999976654 566889999999999999999999999999995 5667899
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCChHHHHHHHcC---cHHHHHHHHhcCCCcccc-------ccccc
Q psy5490 63 ESPLTLAACGGHVDLALLLIERG---ANIEEVNDEGYTPLMEAAREG---HEEMVCVLLQKGAKINAH-------TEETQ 129 (352)
Q Consensus 63 ~t~Lh~A~~~g~~~~v~~Ll~~g---~~~~~~d~~G~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~-------~~~~g 129 (352)
+||||+|+..|+.++|++|++++ ++++..|..|+||||+|+..+ +.+++++|+++|++++.. .+..|
T Consensus 200 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g 279 (373)
T 2fo1_E 200 RSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKG 279 (373)
T ss_dssp CCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCC
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccC
Confidence 99999999999999999999988 899999999999999999998 899999999999999862 34578
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcC-CCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHhh
Q psy5490 130 ETALTLACCGGFLDVADFLLKNG-ANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 130 ~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
.||||+|+..|+.+++++|++++ ++++. .|+||||+|+..|+.++|++|+++|++.+..+..+.+++.....
T Consensus 280 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~ 355 (373)
T 2fo1_E 280 RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQA 355 (373)
T ss_dssp CCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHH
Confidence 99999999999999999999876 88755 68999999999999999999999999999888777766655443
No 20
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=265.14 Aligned_cols=180 Identities=33% Similarity=0.426 Sum_probs=147.2
Q ss_pred CCCCccHHHHHHc--------------CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 3 TDSFESPLTLAAC--------------GGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 3 ~~~g~t~L~lA~~--------------~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
|..|.|+|+.|+. |.++|..|.+|+||||+|+..|+.++|++|++.|+++ +..+..|.||||+
T Consensus 49 ~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~---~~~~~~g~t~l~~ 125 (269)
T 4b93_B 49 DPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA---GARNADQAVPLHL 125 (269)
T ss_dssp --------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT---TCCCTTCCCHHHH
T ss_pred CccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc---CccCCCCCCcccc
Confidence 5568889998873 5678888999999999999999999999999999995 5667899999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHH
Q psy5490 69 AACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 148 (352)
|+..++.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|+.++|++|
T Consensus 126 a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~-~~~~g~t~Lh~A~~~g~~~~v~~L 204 (269)
T 4b93_B 126 ACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINA-SNNKGNTALHEAVIEKHVFVVELL 204 (269)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred ccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCc-cccCCCcHHHHHHHcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 577899999999999999999999
Q ss_pred HHcCCCCCC---CCCCHHHHHHHcCC-HHHHHHHHHcCCCcc
Q psy5490 149 LKNGANIEL---GASTPLMEAAQEGH-LELVRYLLDSGAQEM 186 (352)
Q Consensus 149 l~~g~~~~~---~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~ 186 (352)
+++|++++. .|+||||+|+++++ .+++++|...++...
T Consensus 205 l~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 205 LLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLD 246 (269)
T ss_dssp HHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---------
T ss_pred HHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhhh
Confidence 999999865 78999999998886 466666666665443
No 21
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.5e-35 Score=266.89 Aligned_cols=184 Identities=15% Similarity=0.113 Sum_probs=162.4
Q ss_pred CCCCCccHHHHHHcCCCCCCC-----------CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHH
Q psy5490 2 PTDSFESPLTLAACGGHVNMP-----------TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAA 70 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~~~n~~-----------d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~ 70 (352)
+|.+|+|+||+|+..|+++++ ..+|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDD---SQFDDKGNTALYYAV 103 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTCCT---TCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCcCCCCCcHHHHHH
Confidence 588999999999987764332 235899999999999999999999999995 566789999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCcCCCC-ChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHH
Q psy5490 71 CGGHVDLALLLIERGANIEEVNDEG-YTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLL 149 (352)
Q Consensus 71 ~~g~~~~v~~Ll~~g~~~~~~d~~G-~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 149 (352)
..|+.++|++|+++|++++.++..| .||||+|+..|+.+++++|+++|++... ...|.||||+|+..|+.+++++|+
T Consensus 104 ~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll 181 (285)
T 3kea_A 104 DSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLSCIHITIKNGHVDMMILLL 181 (285)
T ss_dssp HTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CSTHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccCCccHHHHHHHcChHHHHHHHH
Confidence 9999999999999999999999999 7999999999999999999999988743 236889999999999999999999
Q ss_pred HcCCCCCC---CCCCH-HHHHHHcCCHHHHHHHHHcCCCcccccc
Q psy5490 150 KNGANIEL---GASTP-LMEAAQEGHLELVRYLLDSGAQEMQTKH 190 (352)
Q Consensus 150 ~~g~~~~~---~g~t~-L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 190 (352)
++|++++. .|+|| ||+|+..|+.+++++|+++|++.+..+.
T Consensus 182 ~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~ 226 (285)
T 3kea_A 182 DYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL 226 (285)
T ss_dssp HHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG
T ss_pred HcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh
Confidence 99988765 57787 9999999999999999999999887654
No 22
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3.7e-35 Score=259.68 Aligned_cols=180 Identities=24% Similarity=0.205 Sum_probs=161.7
Q ss_pred CCccHHHHHHcCCCC-----------------CC----CCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCcC----
Q psy5490 5 SFESPLTLAACGGHV-----------------NM----PTDSFESPLTLAACG---GHVDLALLLIERGANIEEVN---- 56 (352)
Q Consensus 5 ~g~t~L~lA~~~~~~-----------------n~----~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~n---- 56 (352)
+|+|+||.|+..|++ |. .|..|+||||+|+.. |+.+++++|+++|++++...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 589999999976665 33 577899999999999 99999999999998865322
Q ss_pred ----CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-------------CChHHHHHHHcCcHHHHHHHHh---
Q psy5490 57 ----MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDE-------------GYTPLMEAAREGHEEMVCVLLQ--- 116 (352)
Q Consensus 57 ----~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~-------------G~t~L~~A~~~g~~~~v~~Ll~--- 116 (352)
..|..|+||||+|+..|+.++|++|+++|++++.++.. |+||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 24467999999999999999999999999999999886 9999999999999999999999
Q ss_pred cCCCcccccccccCcHHHHHHH--cCCHH-------HHHHHHHcCCCC-------CC---CCCCHHHHHHHcCCHHHHHH
Q psy5490 117 KGAKINAHTEETQETALTLACC--GGFLD-------VADFLLKNGANI-------EL---GASTPLMEAAQEGHLELVRY 177 (352)
Q Consensus 117 ~g~~~~~~~~~~g~t~L~~A~~--~g~~~-------~v~~Ll~~g~~~-------~~---~g~t~L~~A~~~~~~~~v~~ 177 (352)
+|++++. .+..|+||||+|+. .++.+ ++++|+++|+++ +. .|+||||+|+..|+.+++++
T Consensus 161 ~ga~~n~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 239 (256)
T 2etb_A 161 QPASLEA-TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH 239 (256)
T ss_dssp CCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCCcCc-cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHH
Confidence 9999998 57789999999999 88888 999999999887 43 78999999999999999999
Q ss_pred HHHcCCCc
Q psy5490 178 LLDSGAQE 185 (352)
Q Consensus 178 Ll~~ga~~ 185 (352)
|+++|++.
T Consensus 240 Ll~~g~~~ 247 (256)
T 2etb_A 240 ILQREFSG 247 (256)
T ss_dssp HHHHHHHH
T ss_pred HHhCCCCC
Confidence 99988643
No 23
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.6e-34 Score=257.02 Aligned_cols=181 Identities=23% Similarity=0.228 Sum_probs=166.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChH
Q psy5490 19 VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTP 98 (352)
Q Consensus 19 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~ 98 (352)
++..|.+|+||||+|+..|+.++|++|+++|++.+.++.++..|+||||+|+..|+.++|++|+++|++++.+|..|+||
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 46789999999999999999999999999999877678889999999999999999999999999999999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCC-----------------------------------------------cccccccccCc
Q psy5490 99 LMEAAREGHEEMVCVLLQKGAK-----------------------------------------------INAHTEETQET 131 (352)
Q Consensus 99 L~~A~~~g~~~~v~~Ll~~g~~-----------------------------------------------~~~~~~~~g~t 131 (352)
||+|+..|+.+++++|+++|++ ++. .+..|.|
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~t 160 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA-ENYDGHT 160 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC-CCTTSCC
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCC-cCCCCcC
Confidence 9999999999999999998866 444 3567999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHh
Q psy5490 132 ALTLACCGGFLDVADFLLKNGANIEL----GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRK 200 (352)
Q Consensus 132 ~L~~A~~~g~~~~v~~Ll~~g~~~~~----~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~ 200 (352)
|||+|+..|+.+++++|+++|++++. .|+||||+|+..|+.++|++|+++|++.+..+..+.++.....
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 233 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSAL 233 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHH
Confidence 99999999999999999999999865 3889999999999999999999999999998888777766554
No 24
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.3e-34 Score=257.25 Aligned_cols=189 Identities=29% Similarity=0.334 Sum_probs=155.5
Q ss_pred CCCccHHHHHHcCCCCC------------------------CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Q psy5490 4 DSFESPLTLAACGGHVN------------------------MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPT 59 (352)
Q Consensus 4 ~~g~t~L~lA~~~~~~n------------------------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~ 59 (352)
..|.|+||+|+..|+.. ..|..|+||||+|+..|+.+++++|++.|+++ +..+
T Consensus 13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~---~~~~ 89 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV---NIIT 89 (285)
T ss_dssp -----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS---CEEC
T ss_pred hHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCcC
Confidence 46899999999888742 23678999999999999999999999999985 5667
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHc
Q psy5490 60 DSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCG 139 (352)
Q Consensus 60 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 139 (352)
..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~ 167 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARR 167 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHH
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHc
Confidence 8999999999999999999999999999999999999999999999999999999999999986 33489999999999
Q ss_pred CCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHH
Q psy5490 140 GFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKK 198 (352)
Q Consensus 140 g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~ 198 (352)
|+.+++++|+++|++++. .|+||||+|+..|+.+++++|+++|++.+. +..+.++...
T Consensus 168 g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~ 228 (285)
T 3d9h_A 168 GHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHA 228 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHH
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHH
Confidence 999999999999999865 688999999999999999999999999874 4444444433
No 25
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.9e-33 Score=250.06 Aligned_cols=193 Identities=30% Similarity=0.367 Sum_probs=150.0
Q ss_pred CCCCccHHHHHH-------------cCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHH
Q psy5490 3 TDSFESPLTLAA-------------CGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLA 69 (352)
Q Consensus 3 ~~~g~t~L~lA~-------------~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A 69 (352)
+..|+|+||+|+ .|.+++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|+||||+|
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A 112 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV---NECDFYGFTAFMEA 112 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT---TCBCTTCCBHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CccCcccCCHHHHH
Confidence 566788888887 67778888888888888888888888888888888874 45567788888888
Q ss_pred HHcCCHHHHHHHHHcCCCCCCc----------CCCCChHHHHHHHcCcHHHHHHHHhc-CCCcccccccccCcHHHHHHH
Q psy5490 70 ACGGHVDLALLLIERGANIEEV----------NDEGYTPLMEAAREGHEEMVCVLLQK-GAKINAHTEETQETALTLACC 138 (352)
Q Consensus 70 ~~~g~~~~v~~Ll~~g~~~~~~----------d~~G~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~ 138 (352)
+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++ |++++. .+..|.||||+|+.
T Consensus 113 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~l~~a~~ 191 (285)
T 1wdy_A 113 AVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA-CDNMGRNALIHALL 191 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTC-CCTTSCCHHHHHHH
T ss_pred HHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCc-cCCCCCCHHHHHHH
Confidence 8888888888888888887766 66788888888888888888888876 888776 46667888888888
Q ss_pred cCC----HHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHH-cCCCccccccccHHHHHHH
Q psy5490 139 GGF----LDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLD-SGAQEMQTKHIDILEFKKR 199 (352)
Q Consensus 139 ~g~----~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~ 199 (352)
.++ .+++++|+++|++++. .|+||||+|+..|+.+++++|++ +|++.+..+..+.++....
T Consensus 192 ~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A 260 (285)
T 1wdy_A 192 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLA 260 (285)
T ss_dssp CSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHH
Confidence 887 7788888888887654 57788888888888888888887 7777777666665555443
No 26
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.5e-34 Score=268.95 Aligned_cols=193 Identities=21% Similarity=0.173 Sum_probs=167.7
Q ss_pred CCCCCccHHHHHHcCC-------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 2 PTDSFESPLTLAACGG-------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~-------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
+|..|+|+||+|+..| ++|..|..|+||||+|+..|+.++|++|+++|++++ +..|+||||+
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~g~t~L~~ 90 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS-----LWHGQKPIHL 90 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC-----CBTTBCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc-----ccCCCCHHHH
Confidence 4677999999999644 567779999999999999999999999999999642 2468999999
Q ss_pred HHHcCCHHHHHHHHHc----CCCCCC-----------------cCCCCChHHHHHHHcC--cHHHHHHHHhcCCCccccc
Q psy5490 69 AACGGHVDLALLLIER----GANIEE-----------------VNDEGYTPLMEAAREG--HEEMVCVLLQKGAKINAHT 125 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~----g~~~~~-----------------~d~~G~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~ 125 (352)
|+..|+.++|++|+++ |.+++. .|..|.||||+|+..| +.++|++|+++|++++. .
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-~ 169 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA-K 169 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-C
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc-c
Confidence 9999999999999998 777776 8888999999999999 99999999999999998 4
Q ss_pred ccccCcHHHHHHHcCCHHHHHHHHHcCCC-----CCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHH
Q psy5490 126 EETQETALTLACCGGFLDVADFLLKNGAN-----IEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFK 197 (352)
Q Consensus 126 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~ 197 (352)
+..|.||||+|+..|+.+++++|+++|++ +|. .|+||||+|+..|+.++|++|+++|++.+..+..+.+++.
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLY 249 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 67799999999999999999999999888 654 6889999999999999999999999998888777666655
Q ss_pred HHh
Q psy5490 198 KRK 200 (352)
Q Consensus 198 ~~~ 200 (352)
...
T Consensus 250 ~A~ 252 (364)
T 3ljn_A 250 LSV 252 (364)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 27
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-33 Score=267.98 Aligned_cols=196 Identities=30% Similarity=0.395 Sum_probs=176.1
Q ss_pred CCCCCccHHHHHHcCCC-------------CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 2 PTDSFESPLTLAACGGH-------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~~-------------~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
.|..|+|+||+|+..++ ++..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+
T Consensus 175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~ 251 (437)
T 1n11_A 175 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA---NAESVQGVTPLHL 251 (437)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHH
Confidence 46788999999986554 5556788999999999999999999999999984 5667889999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHH
Q psy5490 69 AACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 148 (352)
|+..|+.++|++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|
T Consensus 252 A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~L 330 (437)
T 1n11_A 252 AAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA-TTRMGYTPLHVASHYGNIKLVKFL 330 (437)
T ss_dssp HHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCSSCCCHHHHHHHSSCSHHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC-CCCCCCCHHHHHHHcCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 577899999999999999999999
Q ss_pred HHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHhh
Q psy5490 149 LKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 149 l~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
+++|+++|. .|+||||+|+..|+.++|++|+++|++....+..+.+++....+
T Consensus 331 l~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~ 386 (437)
T 1n11_A 331 LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKR 386 (437)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHH
T ss_pred HhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence 999999865 68899999999999999999999999999888877777665543
No 28
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=9.1e-35 Score=270.36 Aligned_cols=184 Identities=20% Similarity=0.224 Sum_probs=166.6
Q ss_pred CCCCCCccHHHHHHcCCCCCCC-----------CCCCChHHHHHHHcCCHHHHHHHHHc----CCCCCC-----------
Q psy5490 1 MPTDSFESPLTLAACGGHVNMP-----------TDSFESPLTLAACGGHVDLALLLIER----GANIEE----------- 54 (352)
Q Consensus 1 ~~~~~g~t~L~lA~~~~~~n~~-----------d~~g~t~L~~A~~~g~~~~v~~Ll~~----g~~~~~----------- 54 (352)
++|..|+|+||+|+..|+++++ +.+|+||||+|+..|+.+++++|+++ |.+++.
T Consensus 48 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 127 (364)
T 3ljn_A 48 IQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVN 127 (364)
T ss_dssp CCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEE
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhh
Confidence 3688999999999998876543 45899999999999999999999999 776432
Q ss_pred ---cCCCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCC-----cccc
Q psy5490 55 ---VNMPTDSFESPLTLAACGG--HVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAK-----INAH 124 (352)
Q Consensus 55 ---~n~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~ 124 (352)
.+..+..|+||||+|+..| +.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.
T Consensus 128 ~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~- 206 (364)
T 3ljn_A 128 EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY- 206 (364)
T ss_dssp EETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC-
T ss_pred hhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc-
Confidence 1125678999999999999 99999999999999999999999999999999999999999999999 887
Q ss_pred cccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q psy5490 125 TEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQE 185 (352)
Q Consensus 125 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 185 (352)
.+..|+||||+|+..|+.+++++|+++|++++. .|+||||+|+..|+.++|++|+++|++.
T Consensus 207 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 207 ANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 577899999999999999999999999999865 6889999999999999999999998764
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.6e-33 Score=240.75 Aligned_cols=182 Identities=32% Similarity=0.374 Sum_probs=166.0
Q ss_pred cCCCCCCC-CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCcC
Q psy5490 15 CGGHVNMP-TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGA-NIEEVN 92 (352)
Q Consensus 15 ~~~~~n~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~d 92 (352)
.+.+++.. |..|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+..|+.+++++|++++. +++..+
T Consensus 13 ~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 89 (223)
T 2f8y_A 13 QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA---NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 89 (223)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCC
T ss_pred cCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 45666665 789999999999999999999999999995 5667899999999999999999999999987 899999
Q ss_pred CCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHc
Q psy5490 93 DEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQE 169 (352)
Q Consensus 93 ~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~ 169 (352)
..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. .|.||||+|+..
T Consensus 90 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 90 HDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE 168 (223)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHc
Confidence 9999999999999999999999999999998 467799999999999999999999999999865 688999999999
Q ss_pred CCHHHHHHHHHcCCCccccccccHHHHHHHh
Q psy5490 170 GHLELVRYLLDSGAQEMQTKHIDILEFKKRK 200 (352)
Q Consensus 170 ~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~ 200 (352)
|+.+++++|+++|++....+..+.++.....
T Consensus 169 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 199 (223)
T 2f8y_A 169 GSYETAKVLLDHFANRDITDHMDRLPRDIAQ 199 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCccccccCCCHHHHHH
Confidence 9999999999999999888777766655443
No 30
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=8.7e-35 Score=257.73 Aligned_cols=182 Identities=19% Similarity=0.172 Sum_probs=162.0
Q ss_pred CCCCccHHHHHHcCCCCCCC---------------------CCCCChHHHHHH---HcCCHHHHHHHHHcCCCCCC----
Q psy5490 3 TDSFESPLTLAACGGHVNMP---------------------TDSFESPLTLAA---CGGHVDLALLLIERGANIEE---- 54 (352)
Q Consensus 3 ~~~g~t~L~lA~~~~~~n~~---------------------d~~g~t~L~~A~---~~g~~~~v~~Ll~~g~~~~~---- 54 (352)
|.+|+++||.|+..|+++.+ |..|+||||+|+ ..|+.+++++|++.|++...
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 67899999999998887642 266999999999 67999999999999865322
Q ss_pred ----cCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCChHHHHHHHcCcHHHHHHHHh
Q psy5490 55 ----VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVN--------------DEGYTPLMEAAREGHEEMVCVLLQ 116 (352)
Q Consensus 55 ----~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d--------------~~G~t~L~~A~~~g~~~~v~~Ll~ 116 (352)
++..|..|+||||+|+..|+.++|++|+++|++++.++ ..|+||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 23445689999999999999999999999999999998 689999999999999999999999
Q ss_pred ---cCCCcccccccccCcHHHHHHHcCC---------HHHHHHHHHcCCCC----------CCCCCCHHHHHHHcCCHHH
Q psy5490 117 ---KGAKINAHTEETQETALTLACCGGF---------LDVADFLLKNGANI----------ELGASTPLMEAAQEGHLEL 174 (352)
Q Consensus 117 ---~g~~~~~~~~~~g~t~L~~A~~~g~---------~~~v~~Ll~~g~~~----------~~~g~t~L~~A~~~~~~~~ 174 (352)
+|++++. .+..|+||||+|+..++ .+++++|+++|+++ |..|+||||+|+..|+.++
T Consensus 162 ~~~~ga~~~~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 162 NGHKQADLRR-QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp CSSCCCCTTC-CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred ccccCCCCcc-cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 9999998 57789999999999887 79999999999876 3478999999999999999
Q ss_pred HHHHHHcCCCc
Q psy5490 175 VRYLLDSGAQE 185 (352)
Q Consensus 175 v~~Ll~~ga~~ 185 (352)
|++|+++|++.
T Consensus 241 v~~Ll~~g~~~ 251 (260)
T 3jxi_A 241 FQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhCCCc
Confidence 99999998754
No 31
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=8.4e-34 Score=240.11 Aligned_cols=160 Identities=25% Similarity=0.257 Sum_probs=151.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChH
Q psy5490 19 VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTP 98 (352)
Q Consensus 19 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~ 98 (352)
+|..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 104 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL---EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTP 104 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc---ccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcH
Confidence 5778999999999999999999999999999985 5667899999999999999999999999999999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHH
Q psy5490 99 LMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELV 175 (352)
Q Consensus 99 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v 175 (352)
||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. .|.|||++|+..|+.+++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v 183 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGANVND-RNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVI 183 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHH
Confidence 9999999999999999999999998 577899999999999999999999999999865 789999999999999999
Q ss_pred HHHHHcC
Q psy5490 176 RYLLDSG 182 (352)
Q Consensus 176 ~~Ll~~g 182 (352)
++|+++|
T Consensus 184 ~~Ll~~~ 190 (192)
T 2rfm_A 184 KIFTEVR 190 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 9999865
No 32
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.3e-34 Score=249.31 Aligned_cols=181 Identities=26% Similarity=0.295 Sum_probs=160.4
Q ss_pred CCCCCccHHHHHHcCC-------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCCChHHH
Q psy5490 2 PTDSFESPLTLAACGG-------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIE-EVNMPTDSFESPLT 67 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~-------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~n~~~~~g~t~Lh 67 (352)
+|..|+|+||+|+..| +++..|..|+||||+|+..|+.+++++|++.|.... .++..+..|+||||
T Consensus 42 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~ 121 (241)
T 1k1a_A 42 YNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 121 (241)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHH
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHH
Confidence 5788999999999654 566778999999999999999999999999987211 14667789999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcC-CCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHH
Q psy5490 68 LAACGGHVDLALLLIERGANIEEVN-DEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVAD 146 (352)
Q Consensus 68 ~A~~~g~~~~v~~Ll~~g~~~~~~d-~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 146 (352)
+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.++++
T Consensus 122 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~ 200 (241)
T 1k1a_A 122 VAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA-QMYSGSSALHSASGRGLLPLVR 200 (241)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHHTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999999999998 7899999999999999999999999999998 4778999999999999999999
Q ss_pred HHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy5490 147 FLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGA 183 (352)
Q Consensus 147 ~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga 183 (352)
+|+++|++++. .|+|||++|+..|+.++++.|+++++
T Consensus 201 ~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 201 TLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 99999999865 68899999999999999999998765
No 33
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-32 Score=246.10 Aligned_cols=178 Identities=28% Similarity=0.374 Sum_probs=102.1
Q ss_pred cCCCCCCC-CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Q psy5490 15 CGGHVNMP-TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVND 93 (352)
Q Consensus 15 ~~~~~n~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 93 (352)
.+.+++.. +..|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 27 ~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 103 (285)
T 1wdy_A 27 GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP---VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDF 103 (285)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCc
Confidence 44555555 445566666666666666666666666553 33445556666666666666666666666666666666
Q ss_pred CCChHHHHHHHcCcHHHHHHHHhcCCCccccc---------ccccCcHHHHHHHcCCHHHHHHHHHc-CCCCCC---CCC
Q psy5490 94 EGYTPLMEAAREGHEEMVCVLLQKGAKINAHT---------EETQETALTLACCGGFLDVADFLLKN-GANIEL---GAS 160 (352)
Q Consensus 94 ~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---------~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~---~g~ 160 (352)
.|+||||+|+..|+.+++++|+++|++++... +..|.||||+|+..|+.+++++|+++ |++++. .|+
T Consensus 104 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~ 183 (285)
T 1wdy_A 104 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183 (285)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSC
T ss_pred ccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 66666666666666666666666665555421 33455666666666666666666654 555433 455
Q ss_pred CHHHHHHHcCC----HHHHHHHHHcCCCccccccccHHH
Q psy5490 161 TPLMEAAQEGH----LELVRYLLDSGAQEMQTKHIDILE 195 (352)
Q Consensus 161 t~L~~A~~~~~----~~~v~~Ll~~ga~~~~~~~~~~~~ 195 (352)
||||+|+..++ .+++++|+++|++.+..+..+.++
T Consensus 184 t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~ 222 (285)
T 1wdy_A 184 NALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP 222 (285)
T ss_dssp CHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 66666666555 556666666666555554444433
No 34
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2e-33 Score=262.55 Aligned_cols=180 Identities=22% Similarity=0.279 Sum_probs=163.0
Q ss_pred CCCCCccHHHHHHc-------------CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCCChH
Q psy5490 2 PTDSFESPLTLAAC-------------GGHVNMPTDSFESPLTLAACGGHVDLALLLIERG---ANIEEVNMPTDSFESP 65 (352)
Q Consensus 2 ~~~~g~t~L~lA~~-------------~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~n~~~~~g~t~ 65 (352)
+|.+|+||||+|+. |.+++..|..|.||||+|+..|+.+++++|+++| ++ ++..+..|+||
T Consensus 162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---~~~~d~~g~t~ 238 (373)
T 2fo1_E 162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD---IEELDRNGMTA 238 (373)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT---TSCCCTTSCCH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC---hhhcCCCCCCH
Confidence 57899999999995 4567778999999999999999999999999988 66 46677999999
Q ss_pred HHHHHHcC---CHHHHHHHHHcCCCCCC--------cCCCCChHHHHHHHcCcHHHHHHHHhcC-CCcccccccccCcHH
Q psy5490 66 LTLAACGG---HVDLALLLIERGANIEE--------VNDEGYTPLMEAAREGHEEMVCVLLQKG-AKINAHTEETQETAL 133 (352)
Q Consensus 66 Lh~A~~~g---~~~~v~~Ll~~g~~~~~--------~d~~G~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~t~L 133 (352)
||+|+..+ +.+++++|+++|++++. .|..|+||||+|+..|+.++|++|++++ ++++. .+..|.|||
T Consensus 239 L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~-~d~~g~TpL 317 (373)
T 2fo1_E 239 LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK-QDEDGKTPI 317 (373)
T ss_dssp HHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC-CCTTCCCHH
T ss_pred HHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC-cCCCCCCHH
Confidence 99999998 89999999999999986 6779999999999999999999999886 99998 577899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q psy5490 134 TLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQE 185 (352)
Q Consensus 134 ~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 185 (352)
|+|+..|+.+++++|+++|++++. .|+|||++|+..|+.++|++|++++++.
T Consensus 318 ~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 318 MLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred HHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 999999999999999999999865 6889999999999999999999998864
No 35
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.6e-33 Score=257.98 Aligned_cols=196 Identities=28% Similarity=0.364 Sum_probs=174.1
Q ss_pred CCCCccHHHHHHcCCC--------------CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 3 TDSFESPLTLAACGGH--------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 3 ~~~g~t~L~lA~~~~~--------------~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
++.+.++||.|+..|+ ++..|..|+||||+|+..|+.++|++|+++|+++ +..+..|+||||+
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~ 97 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV---HAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHH
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCCCcHHHH
Confidence 4567899999997665 4556889999999999999999999999999995 6667899999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccc------------------------
Q psy5490 69 AACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAH------------------------ 124 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------------------------ 124 (352)
|+..|+.++|++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 98 A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~ 177 (351)
T 3utm_A 98 ACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEF 177 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999997652
Q ss_pred -----------------------------cccccCcHHHHHHHc---CCHHHHHHHHHcCCCCCC---CCCCHHHHHHHc
Q psy5490 125 -----------------------------TEETQETALTLACCG---GFLDVADFLLKNGANIEL---GASTPLMEAAQE 169 (352)
Q Consensus 125 -----------------------------~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~ 169 (352)
.+..|.|+||+|+.. +..+++++|+++|++++. .|+||||+|+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 257 (351)
T 3utm_A 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAER 257 (351)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHc
Confidence 234577999999999 558999999999999865 688999999999
Q ss_pred CCHHHHHHHHHcCCCccccccccHHHHHHHhh
Q psy5490 170 GHLELVRYLLDSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 170 ~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
|+.+++++|+++|++.+..+..+.++......
T Consensus 258 g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 258 AHNDVMEVLHKHGAKMNALDSLGQTALHRAAL 289 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 99999999999999999888777666655443
No 36
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-33 Score=255.20 Aligned_cols=193 Identities=29% Similarity=0.376 Sum_probs=168.9
Q ss_pred CCCccHHHHHHcC-------------CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHH
Q psy5490 4 DSFESPLTLAACG-------------GHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAA 70 (352)
Q Consensus 4 ~~g~t~L~lA~~~-------------~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~ 70 (352)
..|.|+||.||.. .++|..|..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI---NQPDNEGWIPLHAAA 114 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHH
Confidence 4578999999964 456777999999999999999999999999999995 666789999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhc-CCCccc-------------------------c
Q psy5490 71 CGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQK-GAKINA-------------------------H 124 (352)
Q Consensus 71 ~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~-------------------------~ 124 (352)
..|+.++|++|+++|++++..|..|.||||+|+..++.+++++|+.. +.+++. .
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence 99999999999999999999999999999999999999999877754 444332 2
Q ss_pred cccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHH
Q psy5490 125 TEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKR 199 (352)
Q Consensus 125 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~ 199 (352)
.+..|.||||+|+..|+.+++++|+++|++++. .|+||||+|+..|+.+++++|+++|++....+..+.+++...
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 345689999999999999999999999999865 689999999999999999999999999988877766654443
No 37
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.9e-33 Score=263.78 Aligned_cols=190 Identities=33% Similarity=0.410 Sum_probs=156.0
Q ss_pred CCCCCccHHHHHHcCC-------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 2 PTDSFESPLTLAACGG-------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~-------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
.++.|+|+||+|+..| ++|..+..|.||||+|+..|+.+++++|+++|+++ +.++..|+||||+
T Consensus 10 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~ 86 (437)
T 1n11_A 10 GGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV---NAKAKDDQTPLHC 86 (437)
T ss_dssp -----CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS---SCCCTTSCCHHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC---CCCCCCCCCHHHH
Confidence 4678999999999644 45666888999999999999999999999999884 6667889999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHH
Q psy5490 69 AACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 148 (352)
|+..|+.++|++|+++|++++..+..|+||||+|+..|+.+++++|++++++++. .+..|.||||+|+..|+.+++++|
T Consensus 87 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~L 165 (437)
T 1n11_A 87 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC-MTKKGFTPLHVAAKYGKVRVAELL 165 (437)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcC-CCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999888877 466688899999999999999999
Q ss_pred HHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHH
Q psy5490 149 LKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILE 195 (352)
Q Consensus 149 l~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~ 195 (352)
+++|++++. .|.||||+|+..|+.+++++|+++|++....+..+..+
T Consensus 166 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 215 (437)
T 1n11_A 166 LERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTP 215 (437)
T ss_dssp HHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCH
T ss_pred HhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCH
Confidence 988887754 57788888888888888888888888776655444333
No 38
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=2.9e-33 Score=229.96 Aligned_cols=156 Identities=26% Similarity=0.362 Sum_probs=143.9
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHH
Q psy5490 24 DSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAA 103 (352)
Q Consensus 24 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~ 103 (352)
....|+||+|+..|+.+++++|+++|+++ +..+..|+||||+|+. |+.+++++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNV---NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCT---TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCc---cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 35679999999999999999999999985 6667899999999999 9999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCC-CC---CCCCCHHHHHHHcCCHHHHHHHH
Q psy5490 104 REGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN-IE---LGASTPLMEAAQEGHLELVRYLL 179 (352)
Q Consensus 104 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~---~~g~t~L~~A~~~~~~~~v~~Ll 179 (352)
..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++ ++ ..|+||||+|+..|+.+++++|+
T Consensus 79 ~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQADVNI-EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp HHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999998 577899999999999999999999999987 33 47899999999999999999999
Q ss_pred HcCCC
Q psy5490 180 DSGAQ 184 (352)
Q Consensus 180 ~~ga~ 184 (352)
++||+
T Consensus 158 ~~GAd 162 (162)
T 1ihb_A 158 ANGAG 162 (162)
T ss_dssp HTC--
T ss_pred HhCCC
Confidence 99985
No 39
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=6.3e-33 Score=230.03 Aligned_cols=156 Identities=35% Similarity=0.482 Sum_probs=145.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHH
Q psy5490 23 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEA 102 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A 102 (352)
...+.++|++|++.|+.++|++|+++|+++ +..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV---NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLA 87 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 345679999999999999999999999985 66778999999999999999999999999999999999999999999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHH
Q psy5490 103 AREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLL 179 (352)
Q Consensus 103 ~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll 179 (352)
+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. .|.|||++|+..|+.+++++|+
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 166 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADVNA-NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 999999999999999999998 477799999999999999999999999999754 6889999999999999999999
Q ss_pred HcC
Q psy5490 180 DSG 182 (352)
Q Consensus 180 ~~g 182 (352)
++|
T Consensus 167 ~~G 169 (169)
T 2y1l_E 167 KLN 169 (169)
T ss_dssp TC-
T ss_pred HcC
Confidence 876
No 40
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.9e-33 Score=256.60 Aligned_cols=157 Identities=30% Similarity=0.384 Sum_probs=89.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCCChHHHHHHHcCC----HHHHHHHHHcCCCCCCcCCCCChH
Q psy5490 24 DSFESPLTLAACGGHVDLALLLIE-RGANIEEVNMPTDSFESPLTLAACGGH----VDLALLLIERGANIEEVNDEGYTP 98 (352)
Q Consensus 24 ~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~n~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~~g~~~~~~d~~G~t~ 98 (352)
..|.||||+|+..|+.++|++||+ .|+++ +..+..|+|+||+++..+. .+++++|+++|++++.+|..|+||
T Consensus 166 ~~g~T~L~~A~~~g~~~~v~~LL~~~gad~---n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~ 242 (337)
T 4g8k_A 166 KGGATALMDAAEKGHVEVLKILLDEMGADV---NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP 242 (337)
T ss_dssp TCSCCHHHHHHHHTCHHHHHHHHHHSCCCT---TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCCcHHHHHHHCCCHHHHHHHHhccCCCc---CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 345566666666666666666653 35553 4444555666655554332 235555666666666666666666
Q ss_pred HHHHHHcCcHHHHHHHHhc-CCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCHHHHHHHcCCHHHHHH
Q psy5490 99 LMEAAREGHEEMVCVLLQK-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRY 177 (352)
Q Consensus 99 L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~g~t~L~~A~~~~~~~~v~~ 177 (352)
||+|+..|+.+++++|++. |++++. .+..|+||||+|+..|+.++|++||++|+++|. .+|||+|++.|+.++|++
T Consensus 243 L~~a~~~~~~~~v~~Ll~~~~~~vn~-~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~--~~~L~~A~~~~~~~iv~~ 319 (337)
T 4g8k_A 243 LILAVEKKHLGLVQRLLEQEHIEIND-TDSDGKTALLLAVELKLKKIAELLCKRGASTDC--GDLVMTARRNYDHSLVKV 319 (337)
T ss_dssp HHHHHHTTCHHHHHHHHTSTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT--CCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHhhhhHHHHHHHHhcCCcccC-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCHHHHHHHcCCHHHHHH
Confidence 6666666666666666553 555555 344556666666666666666666666665542 346666666666666666
Q ss_pred HHHcCCCcc
Q psy5490 178 LLDSGAQEM 186 (352)
Q Consensus 178 Ll~~ga~~~ 186 (352)
|+++||+++
T Consensus 320 Ll~~GA~~d 328 (337)
T 4g8k_A 320 LLSHGAKED 328 (337)
T ss_dssp HHHTTCCC-
T ss_pred HHHCcCCCC
Confidence 666666544
No 41
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.8e-33 Score=243.24 Aligned_cols=196 Identities=24% Similarity=0.322 Sum_probs=172.8
Q ss_pred CCCCCccHHHHHHcCC-------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHH
Q psy5490 2 PTDSFESPLTLAACGG-------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTL 68 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~-------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~ 68 (352)
.|++|.++|+.|+..| +++..+..|.||||+|+..|+.+++++|+++|.++.. ..+..|+||||+
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~~~t~L~~ 82 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQ--LGGDLNSTPLHW 82 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CBTTTTBCHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchh--hcCCcCCChhHH
Confidence 3788999999999655 4566788999999999999999999999999998643 334568999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCC-HHHHHH
Q psy5490 69 AACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGF-LDVADF 147 (352)
Q Consensus 69 A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~ 147 (352)
|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..++ .+++++
T Consensus 83 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~~ 161 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM-MDQNGMTPLMWAAYRTHSVDPTRL 161 (240)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHCCSSTTHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccc-cCCCCCcHHHHHHHhCChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 57779999999997666 899999
Q ss_pred HHHcCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHh
Q psy5490 148 LLKNGANIEL----GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRK 200 (352)
Q Consensus 148 Ll~~g~~~~~----~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~ 200 (352)
|++.|++++. .|.||||+|+..|+.+++++|+++|++....+..+.++.....
T Consensus 162 L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAK 218 (240)
T ss_dssp HHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHH
T ss_pred HHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 9999999864 5779999999999999999999999999888777666655443
No 42
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=8.4e-33 Score=229.36 Aligned_cols=139 Identities=37% Similarity=0.550 Sum_probs=127.0
Q ss_pred cCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Q psy5490 15 CGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDE 94 (352)
Q Consensus 15 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~ 94 (352)
.|.++|..|.+|+||||+|+..++.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|+++|++++.+|.+
T Consensus 26 ~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~---~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~ 102 (169)
T 4gpm_A 26 NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV---NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD 102 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch---hhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCC
Confidence 45678888999999999999999999999999999995 667799999999999999999999999999999999999
Q ss_pred CChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy5490 95 GYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL 157 (352)
Q Consensus 95 G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 157 (352)
|+||||+|+..|+.++|++|+++|++++. .+..|+||||+|+..|+.+++++|+++|+++|.
T Consensus 103 G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 103 GRTPLHHAAENGHKEVVKLLISKGADVNT-SDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999998 577899999999999999999999999999875
No 43
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=7.1e-33 Score=228.98 Aligned_cols=157 Identities=20% Similarity=0.231 Sum_probs=147.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHH
Q psy5490 25 SFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAR 104 (352)
Q Consensus 25 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~ 104 (352)
.|.||||+|+..|+.+++++|++.|.+ ++..+..|+||||+|+..|+.++|++|+++|++++.++..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV---INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC---cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 578999999999999999999999988 46677999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHc
Q psy5490 105 EGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDS 181 (352)
Q Consensus 105 ~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ 181 (352)
.|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. .|.|||++|+..|+.+++++|+++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVNE-YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp HTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 9999999999999999998 577899999999999999999999999999754 688999999999999999999998
Q ss_pred CCCc
Q psy5490 182 GAQE 185 (352)
Q Consensus 182 ga~~ 185 (352)
+++.
T Consensus 158 ~~~~ 161 (167)
T 3v31_A 158 LLKL 161 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 44
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=4.6e-33 Score=231.26 Aligned_cols=164 Identities=23% Similarity=0.294 Sum_probs=148.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHc
Q psy5490 26 FESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAARE 105 (352)
Q Consensus 26 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~ 105 (352)
+.+|||+|+..|+++++++|++.|.+. ++..+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNL--VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGG--GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCccc--ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHC
Confidence 468999999999999999999998763 567789999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcC
Q psy5490 106 GHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSG 182 (352)
Q Consensus 106 g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g 182 (352)
|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. .|+||||+|+..|+.+++++|+++|
T Consensus 80 ~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 80 GYTDIVGLLLERDVDINI-YDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI 158 (172)
T ss_dssp TCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHH
Confidence 999999999999999998 477899999999999999999999999999865 6889999999999999999999999
Q ss_pred CCcccccccc
Q psy5490 183 AQEMQTKHID 192 (352)
Q Consensus 183 a~~~~~~~~~ 192 (352)
++....+..+
T Consensus 159 ~~~~~~~~~~ 168 (172)
T 3v30_A 159 LKLFQSNLVP 168 (172)
T ss_dssp HHHSCC----
T ss_pred HHHhcccCCC
Confidence 8766555443
No 45
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=239.05 Aligned_cols=182 Identities=26% Similarity=0.346 Sum_probs=162.7
Q ss_pred CCCCCccHHHHHHcCCCCCCC--------------CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHH
Q psy5490 2 PTDSFESPLTLAACGGHVNMP--------------TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLT 67 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~~~n~~--------------d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh 67 (352)
+|..|.|+||+|+..|+++++ +..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||
T Consensus 38 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l~ 114 (240)
T 3eu9_A 38 PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP---SLIDGEGCSCIH 114 (240)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCHHH
Confidence 578899999999988775432 345899999999999999999999999995 556789999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCc-HHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHH
Q psy5490 68 LAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGH-EEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVAD 146 (352)
Q Consensus 68 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 146 (352)
+|+..|+.+++++|+++|++++.++..|.||||+|+..++ .+++++|++.|++++......|.||||+|+..|+.++++
T Consensus 115 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 194 (240)
T 3eu9_A 115 LAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVIS 194 (240)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999999999999997766 899999999999999865558999999999999999999
Q ss_pred HHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy5490 147 FLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEM 186 (352)
Q Consensus 147 ~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 186 (352)
+|+++|++++. .|+|||++|++.|+.+++++|++++++..
T Consensus 195 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 195 LLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp HHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 99999999865 68999999999999999999999988654
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.4e-32 Score=237.49 Aligned_cols=180 Identities=28% Similarity=0.369 Sum_probs=165.4
Q ss_pred CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Q psy5490 17 GHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGY 96 (352)
Q Consensus 17 ~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~ 96 (352)
.+++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+..|+.++|++|+++|++++.++..|.
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 78 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANI---DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGS 78 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSC
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCc---CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 467888999999999999999999999999999995 55678999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCcHHHHHHHHhcC-CCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCH
Q psy5490 97 TPLMEAAREGHEEMVCVLLQKG-AKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHL 172 (352)
Q Consensus 97 t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~ 172 (352)
||||+|+..|+.+++++|+++| .+++. .+..|.||||+|+..|+.+++++|+++|++++. .|.||||+|+..|+.
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVNC-QDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH
Confidence 9999999999999999999998 78887 577799999999999999999999999999865 688999999999999
Q ss_pred HHHHHHHHcCCCccccccccHHHHHHHh
Q psy5490 173 ELVRYLLDSGAQEMQTKHIDILEFKKRK 200 (352)
Q Consensus 173 ~~v~~Ll~~ga~~~~~~~~~~~~~~~~~ 200 (352)
+++++|+++|++....+..+.++.....
T Consensus 158 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 185 (237)
T 3b7b_A 158 DIAEILLAAKCDLHAVNIHGDSPLHIAA 185 (237)
T ss_dssp HHHHHHHTTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999888776666655443
No 47
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3e-32 Score=250.74 Aligned_cols=169 Identities=25% Similarity=0.270 Sum_probs=144.8
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCc-------CCCCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCc
Q psy5490 20 NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEV-------NMPTDSFESPLTLAACGGHVDLALLLIE-RGANIEEV 91 (352)
Q Consensus 20 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-------n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~g~~~~~~ 91 (352)
+..|..|.||||+|+..|+.+++++|+++|++++.. ...+..|.||||+|+..|+.++|++|++ .|++++.+
T Consensus 119 ~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~ 198 (337)
T 4g8k_A 119 NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC 198 (337)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCC
T ss_pred hhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCcc
Confidence 344778889999999999999999999999886532 2345678999999999999999999996 58999999
Q ss_pred CCCCChHHHHHHHcCc----HHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHc-CCCCCC---CCCCHH
Q psy5490 92 NDEGYTPLMEAAREGH----EEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKN-GANIEL---GASTPL 163 (352)
Q Consensus 92 d~~G~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~---~g~t~L 163 (352)
|..|.|+||+++..+. .+++++|+++|++++. .+..|+||||+|+..|+.+++++|++. |+++|. .|+|||
T Consensus 199 d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~-~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL 277 (337)
T 4g8k_A 199 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV-RGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTAL 277 (337)
T ss_dssp CTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTC-CCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHH
T ss_pred CCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHH
Confidence 9999999998876543 4688999999999998 477899999999999999999999985 777754 789999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCccccc
Q psy5490 164 MEAAQEGHLELVRYLLDSGAQEMQTK 189 (352)
Q Consensus 164 ~~A~~~~~~~~v~~Ll~~ga~~~~~~ 189 (352)
|+|++.|+.++|++|+++|++.+..+
T Consensus 278 ~~A~~~g~~~iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 278 LLAVELKLKKIAELLCKRGASTDCGD 303 (337)
T ss_dssp HHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 99999999999999999999987654
No 48
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.8e-32 Score=240.61 Aligned_cols=168 Identities=31% Similarity=0.379 Sum_probs=152.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHH
Q psy5490 25 SFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAR 104 (352)
Q Consensus 25 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~ 104 (352)
+|+||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV---NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS---SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 6899999999999999999999999984 6677899999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHc
Q psy5490 105 EGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDS 181 (352)
Q Consensus 105 ~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ 181 (352)
.|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++. .|+||||+|+..|+.+++++|+++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 156 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 156 (261)
T ss_dssp HTCHHHHHHHHHTTCCSSC--SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 9999999999999999986 34589999999999999999999999999865 688999999999999999999999
Q ss_pred CCCccccccccHHHHHH
Q psy5490 182 GAQEMQTKHIDILEFKK 198 (352)
Q Consensus 182 ga~~~~~~~~~~~~~~~ 198 (352)
|++.+. +..+.++...
T Consensus 157 g~~~~~-~~~g~t~Lh~ 172 (261)
T 2xai_A 157 GADVNQ-GKGQDSPLHA 172 (261)
T ss_dssp TCCTTC-CBTTBCHHHH
T ss_pred CCCCCC-CCCCCChHHH
Confidence 999875 4444444443
No 49
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=8.6e-33 Score=239.70 Aligned_cols=173 Identities=24% Similarity=0.285 Sum_probs=156.0
Q ss_pred CCCCCccHHHHHHcCCCC---------------CC-CCCCCChHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCCC
Q psy5490 2 PTDSFESPLTLAACGGHV---------------NM-PTDSFESPLTLAACGGHVDLALLLIERG--ANIEEVNMPTDSFE 63 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~~~---------------n~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~n~~~~~g~ 63 (352)
+|..|+|+||+|+..|+. +. .+..|+||||+|+..|+.+++++|+++| ++ ++..+..|+
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~~~g~ 108 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD---LNKITNQGV 108 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC---TTCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc---cccCCcCCC
Confidence 588999999999976553 22 5778999999999999999999999999 65 466778999
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcC-CCcccccccccCcHHHHHHHcCCH
Q psy5490 64 SPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKG-AKINAHTEETQETALTLACCGGFL 142 (352)
Q Consensus 64 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~g~~ 142 (352)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++. .+..|+||||+|+..|+.
T Consensus 109 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~~~~ 187 (228)
T 2dzn_A 109 TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW-QDKQGWTPLFHALAEGHG 187 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC-CCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC-cCCCCCCHHHHHHHcCCH
Confidence 9999999999999999999999999999999999999999999999999999999 99998 577899999999999999
Q ss_pred HHHHHHH-HcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHc
Q psy5490 143 DVADFLL-KNGANIEL---GASTPLMEAAQEGHLELVRYLLDS 181 (352)
Q Consensus 143 ~~v~~Ll-~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ 181 (352)
+++++|+ ++|++++. .|+|||++|+.. +++++|+++
T Consensus 188 ~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 188 DAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp HHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred HHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 9999999 89999865 789999999754 677777754
No 50
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6.7e-33 Score=249.50 Aligned_cols=174 Identities=19% Similarity=0.195 Sum_probs=159.9
Q ss_pred CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Q psy5490 16 GGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEG 95 (352)
Q Consensus 16 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G 95 (352)
.+++|..|.+|+||||+|+..|+.+++++|+++|+++ +.. +|+||||+|+..|+.++|++|+++|++++.+|..|
T Consensus 21 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 95 (285)
T 3kea_A 21 SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK---NLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKG 95 (285)
T ss_dssp STTTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG---SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTS
T ss_pred hCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC---CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 3579999999999999999999999999999999985 433 48999999999999999999999999999999999
Q ss_pred ChHHHHHHHcCcHHHHHHHHhcCCCccccccccc-CcHHHHHHHcCCHHHHHHHHHcCCCC-CC-CCCCHHHHHHHcCCH
Q psy5490 96 YTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQ-ETALTLACCGGFLDVADFLLKNGANI-EL-GASTPLMEAAQEGHL 172 (352)
Q Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g-~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~-~g~t~L~~A~~~~~~ 172 (352)
+||||+|+..|+.+++++|+++|++++.. +..| .||||+|+..|+.+++++|+++|++. +. .|+||||+|+..|+.
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~ 174 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMFY-GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHV 174 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGC-SSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCcc-CCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChH
Confidence 99999999999999999999999999985 5556 89999999999999999999999887 33 688999999999999
Q ss_pred HHHHHHHHcCCCccccccccHHH
Q psy5490 173 ELVRYLLDSGAQEMQTKHIDILE 195 (352)
Q Consensus 173 ~~v~~Ll~~ga~~~~~~~~~~~~ 195 (352)
+++++|+++|++.+..+..+.++
T Consensus 175 ~~v~~Ll~~gad~n~~~~~g~t~ 197 (285)
T 3kea_A 175 DMMILLLDYMTSTNTNNSLLFIP 197 (285)
T ss_dssp HHHHHHHHHHHHTCTTCCCBCCT
T ss_pred HHHHHHHHcCCCCCcccCCCCCh
Confidence 99999999999988887766443
No 51
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.2e-32 Score=235.64 Aligned_cols=173 Identities=25% Similarity=0.316 Sum_probs=154.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC-----CCcCCCCChH
Q psy5490 25 SFESPLTLAACGGHVDLALLLIER-GANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANI-----EEVNDEGYTP 98 (352)
Q Consensus 25 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~-----~~~d~~G~t~ 98 (352)
.|+||||+|+..|+.+++++|++. |+++ +..|..|+||||+|+..|+.++|++|+++|+++ +..|..|+||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~ 78 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV---HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTA 78 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc---ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCH
Confidence 589999999999999999999998 8884 667799999999999999999999999999887 6778899999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCcccccc------------cccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHH
Q psy5490 99 LMEAAREGHEEMVCVLLQKGAKINAHTE------------ETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPL 163 (352)
Q Consensus 99 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~------------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L 163 (352)
||+|+..|+.+++++|+++|++++.... ..|.||||+|+..|+.+++++|+++|++++. .|+|||
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVL 158 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 9999999999999999999999987532 2699999999999999999999999999865 689999
Q ss_pred HHHHHcCCHHHH----HHHHHcCCCc------cccccccHHHHHHHh
Q psy5490 164 MEAAQEGHLELV----RYLLDSGAQE------MQTKHIDILEFKKRK 200 (352)
Q Consensus 164 ~~A~~~~~~~~v----~~Ll~~ga~~------~~~~~~~~~~~~~~~ 200 (352)
|+|+..|+.+++ ++|+++|++. ...+..+.++.....
T Consensus 159 ~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~ 205 (232)
T 2rfa_A 159 HILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAG 205 (232)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHH
Confidence 999999999988 9999999987 355566665555443
No 52
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1e-31 Score=218.95 Aligned_cols=148 Identities=32% Similarity=0.379 Sum_probs=139.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHc
Q psy5490 26 FESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAARE 105 (352)
Q Consensus 26 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~ 105 (352)
+.++|+.|+..|+.+++++|+++|.+++ .+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT----TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC----CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 4689999999999999999999999753 468899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHH
Q psy5490 106 GHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYL 178 (352)
Q Consensus 106 g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~L 178 (352)
|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. .|.|||++|+..|+.+++++|
T Consensus 78 ~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 78 GHANIVEVLLKHGADVNA-KDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ChHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999998 477899999999999999999999999999865 688999999999999999997
No 53
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.98 E-value=7.5e-32 Score=225.58 Aligned_cols=165 Identities=29% Similarity=0.298 Sum_probs=149.2
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHH
Q psy5490 24 DSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAA 103 (352)
Q Consensus 24 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~ 103 (352)
.++.++||.||..|+.+++++|++.+.. .++..+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTEN--DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTS--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 4578999999999999999999998432 15677899999999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHH
Q psy5490 104 REGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLD 180 (352)
Q Consensus 104 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~ 180 (352)
..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. .|.|||++|+..++.+++++|++
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADINA-VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp HTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 477899999999999999999999999999854 78999999999999999999999
Q ss_pred cCCCccccccc
Q psy5490 181 SGAQEMQTKHI 191 (352)
Q Consensus 181 ~ga~~~~~~~~ 191 (352)
+|++.......
T Consensus 160 ~g~~~~~~~~~ 170 (179)
T 3f6q_A 160 MGQNLNRIPYK 170 (179)
T ss_dssp TTCCCSCBCCC
T ss_pred hhcCcccCCcc
Confidence 99998765433
No 54
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.98 E-value=4.2e-32 Score=223.87 Aligned_cols=158 Identities=25% Similarity=0.322 Sum_probs=142.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHH
Q psy5490 22 PTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLME 101 (352)
Q Consensus 22 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~ 101 (352)
.|.+|.++||.|+..|+.+++++|++.+.. ..+..+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 81 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSV--NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHN 81 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTT--TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCC--CccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHH
Confidence 366789999999999999999999985432 145567889999999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHH
Q psy5490 102 AAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYL 178 (352)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~L 178 (352)
|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. .|+|||++|+. |+.+++++|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L 159 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAVVNV-ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLL 159 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHH
T ss_pred HHHcCcHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHH
Confidence 9999999999999999999998 577899999999999999999999999998755 78999999877 899999999
Q ss_pred HHcCC
Q psy5490 179 LDSGA 183 (352)
Q Consensus 179 l~~ga 183 (352)
+++|+
T Consensus 160 ~~~gA 164 (165)
T 3twr_A 160 RGDAA 164 (165)
T ss_dssp HTC--
T ss_pred hhccc
Confidence 99886
No 55
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=9.2e-33 Score=241.26 Aligned_cols=178 Identities=26% Similarity=0.281 Sum_probs=152.8
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChH
Q psy5490 20 NMPTDSFESPLTLAACGGHVDLALLLIERGANI-EEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTP 98 (352)
Q Consensus 20 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~ 98 (352)
+.+|.+|+||||+|+..|+.+++++|++.+... ..++..+..|+||||+|+..|+.++|++|+++|++++.+|..|+||
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 81 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP 81 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 456889999999999999999999999887631 1257778999999999999999999999999999999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCc------ccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Q psy5490 99 LMEAAREGHEEMVCVLLQKGAKI------NAHTEETQETALTLACCGGFLDVADFLLKNGANIEL----GASTPLMEAAQ 168 (352)
Q Consensus 99 L~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----~g~t~L~~A~~ 168 (352)
||+|+..|+.+++++|+++|++. +. .+..|.||||+|+..|+.+++++|+++|++++. .|+||||+|+.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKA-TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGC-CCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999763 33 466799999999999999999999999999864 68899999999
Q ss_pred cCCHHHHHHHHHcCCCccccccccHHHHHH
Q psy5490 169 EGHLELVRYLLDSGAQEMQTKHIDILEFKK 198 (352)
Q Consensus 169 ~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~ 198 (352)
.|+.++|++|+++|++....+..+.+++..
T Consensus 161 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 190 (236)
T 1ikn_D 161 LQNPDLVSLLLKCGADVNRVTYQGYSPYQL 190 (236)
T ss_dssp TTCHHHHHHHHTTTCCSCCCCTTCCCGGGG
T ss_pred cCCHHHHHHHHHcCCCCCcccCCCCCHHHH
Confidence 999999999999999998877666555443
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.3e-31 Score=239.96 Aligned_cols=160 Identities=27% Similarity=0.374 Sum_probs=150.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCCChHHHHHH-----HcCCHHHHHHHHHcCCCCCCcC
Q psy5490 19 VNMPTDSFESPLTLAACGGHVDLALLLIERGA-NIEEVNMPTDSFESPLTLAA-----CGGHVDLALLLIERGANIEEVN 92 (352)
Q Consensus 19 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~n~~~~~g~t~Lh~A~-----~~g~~~~v~~Ll~~g~~~~~~d 92 (352)
+|..|.+|+||||+|+..|+.+++++|++.|+ + ++..+..|+||||+|+ ..++.+++++|++.|.+.+..+
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~ 180 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCK---VDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKAS 180 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCC---TTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCT
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc---CCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccC
Confidence 78889999999999999999999999999998 6 4667799999999999 6689999999999999999999
Q ss_pred CCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHH-cCCCCCC---CCCCHHHHHHH
Q psy5490 93 DEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLK-NGANIEL---GASTPLMEAAQ 168 (352)
Q Consensus 93 ~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~---~g~t~L~~A~~ 168 (352)
..|+||||+|+..|+.++|++|+++|++++. .+..|+||||+|+..|+.+++++|++ .|++++. .|+||||+|+.
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~-~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~ 259 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLACEADVNV-QDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD 259 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH
Confidence 9999999999999999999999999999998 47789999999999999999999999 8998765 78999999999
Q ss_pred cCCHHHHHHHHHcC
Q psy5490 169 EGHLELVRYLLDSG 182 (352)
Q Consensus 169 ~~~~~~v~~Ll~~g 182 (352)
.|+.+++++|++++
T Consensus 260 ~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 260 AGQSEIASMLYSRM 273 (276)
T ss_dssp HTCHHHHHHHHHHC
T ss_pred cCCHHHHHHHHhcc
Confidence 99999999999875
No 57
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=9.9e-31 Score=222.37 Aligned_cols=175 Identities=22% Similarity=0.311 Sum_probs=157.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHH
Q psy5490 23 TDSFESPLTLAACGGHVDLALLLIERGA-NIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLME 101 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~ 101 (352)
+..+.|+||.|+..|+.+++++|++.+. + ++..+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQ---VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLY 78 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 4568999999999999999999999876 5 46677899999999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHH-hcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcC-CCCCC---CCCCHHHHHHHcCC-----
Q psy5490 102 AAREGHEEMVCVLL-QKGAKINAHTEETQETALTLACCGGFLDVADFLLKNG-ANIEL---GASTPLMEAAQEGH----- 171 (352)
Q Consensus 102 A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~---~g~t~L~~A~~~~~----- 171 (352)
|+..|+.+++++|+ ..+++++. .+..|.||||+|+..|+.+++++|+++| ++++. .|+||||+|+..++
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 157 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNK-HNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLY 157 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTC-CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHH
T ss_pred HHHcCCHHHHHHHHhccCccccc-ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhH
Confidence 99999999999999 55778887 5778999999999999999999999999 77654 68899999999988
Q ss_pred HHHHHHHHHcCCCccccccccHHHHHHHhh
Q psy5490 172 LELVRYLLDSGAQEMQTKHIDILEFKKRKQ 201 (352)
Q Consensus 172 ~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 201 (352)
.+++++|+++|++....+..+.+++....+
T Consensus 158 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 187 (201)
T 3hra_A 158 QDIVKLLMENGADQSIKDNSGRTAMDYANQ 187 (201)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Confidence 999999999999999888777766655443
No 58
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=7.1e-31 Score=214.35 Aligned_cols=150 Identities=27% Similarity=0.342 Sum_probs=139.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHH
Q psy5490 26 FESPLTLAACGGHVDLALLLIER-GANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAR 104 (352)
Q Consensus 26 g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~ 104 (352)
+.|+||+|+..|+.+++++|++. +.+ ++..+..|+||||+ +..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~---~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVH---PDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCC---TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcC---ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 56899999999999999999998 225 46677899999999 99999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHc
Q psy5490 105 EGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDS 181 (352)
Q Consensus 105 ~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ 181 (352)
.|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++ ++++. .|.|||++|+..|+.+++++|+++
T Consensus 78 ~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADVNV-PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999998 467899999999999999999999999 87754 688999999999999999999975
No 59
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=3.5e-31 Score=234.06 Aligned_cols=176 Identities=20% Similarity=0.174 Sum_probs=151.7
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHHcCCCCCCcC-CCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCc-----
Q psy5490 25 SFESPLTLAACGGHVD----LALLLIERGANIEEVN-MPTDSFESPLTLAACG---GHVDLALLLIERGANIEEV----- 91 (352)
Q Consensus 25 ~g~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~~n-~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~----- 91 (352)
.|+||||+||..|+.+ ++++|++.|++++... ..|..|+||||+|+.. |+.++|++|+++|++++..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 3789999999999997 6678888999854311 1578999999999999 9999999999999887643
Q ss_pred ------CCCCChHHHHHHHcCcHHHHHHHHhcCCCccccccc------------ccCcHHHHHHHcCCHHHHHHHHH---
Q psy5490 92 ------NDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEE------------TQETALTLACCGGFLDVADFLLK--- 150 (352)
Q Consensus 92 ------d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~------------~g~t~L~~A~~~g~~~~v~~Ll~--- 150 (352)
|..|+||||+|+..|+.+++++|+++|++++..... .|.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 377999999999999999999999999999985433 29999999999999999999999
Q ss_pred cCCCCCC---CCCCHHHHHHH--cCCHH-------HHHHHHHcCCCc-------cccccccHHHHHHHh
Q psy5490 151 NGANIEL---GASTPLMEAAQ--EGHLE-------LVRYLLDSGAQE-------MQTKHIDILEFKKRK 200 (352)
Q Consensus 151 ~g~~~~~---~g~t~L~~A~~--~~~~~-------~v~~Ll~~ga~~-------~~~~~~~~~~~~~~~ 200 (352)
+|++++. .|+||||+|+. .++.+ ++++|+++|++. ...+..+.++.....
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~ 229 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAA 229 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHH
Confidence 9999865 78999999999 88888 999999999998 677777666655543
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.6e-30 Score=219.93 Aligned_cols=148 Identities=28% Similarity=0.316 Sum_probs=138.0
Q ss_pred CCCCCCccHHHHHHcCCC-------------CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHH
Q psy5490 1 MPTDSFESPLTLAACGGH-------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLT 67 (352)
Q Consensus 1 ~~~~~g~t~L~lA~~~~~-------------~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh 67 (352)
++|..|+|+||+|+..|+ ++..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+||||
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~ 106 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV---NTKDFSGKTPLM 106 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT---TCCCTTSCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCcHHH
Confidence 368899999999997665 5556889999999999999999999999999985 667789999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHH
Q psy5490 68 LAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADF 147 (352)
Q Consensus 68 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 147 (352)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~v~~ 185 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA-RDLTGLTAEASARIFGRQEVIKI 185 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 47789999999999999999999
Q ss_pred HHHcC
Q psy5490 148 LLKNG 152 (352)
Q Consensus 148 Ll~~g 152 (352)
|+++|
T Consensus 186 Ll~~~ 190 (192)
T 2rfm_A 186 FTEVR 190 (192)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 99875
No 61
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=7.3e-31 Score=234.31 Aligned_cols=183 Identities=19% Similarity=0.196 Sum_probs=149.7
Q ss_pred CCCCCCCCCCChHHHHHHHcCCHHHHHHHHH----cCCCCCCcC-CCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCC
Q psy5490 17 GHVNMPTDSFESPLTLAACGGHVDLALLLIE----RGANIEEVN-MPTDSFESPLTLAACG---GHVDLALLLIERGANI 88 (352)
Q Consensus 17 ~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~n-~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~ 88 (352)
...+..|..|+|+||+||..|++++|++|++ .+.+++..+ ..+..|+||||+|+.. |+.++|++|+++|+++
T Consensus 4 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 4 AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp -------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred ccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 4456678999999999999999999998887 455543222 3478999999999987 9999999999998653
Q ss_pred -------C----CcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccc-------------cccCcHHHHHHHcCCHHH
Q psy5490 89 -------E----EVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTE-------------ETQETALTLACCGGFLDV 144 (352)
Q Consensus 89 -------~----~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-------------~~g~t~L~~A~~~g~~~~ 144 (352)
+ ..|..|+||||+|+..|+.++|++|+++|++++.... ..|.||||+|+..|+.++
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 163 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAI 163 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHH
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHH
Confidence 2 2567899999999999999999999999999998543 169999999999999999
Q ss_pred HHHHHH---cCCCCCC---CCCCHHHHHHHcCC---------HHHHHHHHHcCCCcc-------ccccccHHHHHHH
Q psy5490 145 ADFLLK---NGANIEL---GASTPLMEAAQEGH---------LELVRYLLDSGAQEM-------QTKHIDILEFKKR 199 (352)
Q Consensus 145 v~~Ll~---~g~~~~~---~g~t~L~~A~~~~~---------~~~v~~Ll~~ga~~~-------~~~~~~~~~~~~~ 199 (352)
+++|++ +|++++. .|+||||+|+..|+ .+++++|+++|++.+ ..+..+.++....
T Consensus 164 v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 164 VKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 999999 8998865 78999999999998 899999999999875 3555565555544
No 62
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=6.4e-30 Score=212.23 Aligned_cols=148 Identities=29% Similarity=0.387 Sum_probs=135.4
Q ss_pred CccHHHHHHcCCC--------------CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHH
Q psy5490 6 FESPLTLAACGGH--------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAAC 71 (352)
Q Consensus 6 g~t~L~lA~~~~~--------------~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~ 71 (352)
+.++||.|+..|+ ++..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP---HILAKERESALSLAST 78 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT---TCCCTTCCCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---hhhcccCCCHHHHHHH
Confidence 5689999997766 4556889999999999999999999999999995 5667899999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHc
Q psy5490 72 GGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKN 151 (352)
Q Consensus 72 ~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 151 (352)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT-EADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 577899999999999999999999999
Q ss_pred CCCCCC
Q psy5490 152 GANIEL 157 (352)
Q Consensus 152 g~~~~~ 157 (352)
|+++..
T Consensus 158 ~~~~~~ 163 (172)
T 3v30_A 158 ILKLFQ 163 (172)
T ss_dssp HHHHSC
T ss_pred HHHHhc
Confidence 886543
No 63
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.6e-30 Score=238.55 Aligned_cols=172 Identities=18% Similarity=0.131 Sum_probs=143.7
Q ss_pred cCCCCCC-CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCC---HHHHHHHHHcC-CCCC
Q psy5490 15 CGGHVNM-PTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGH---VDLALLLIERG-ANIE 89 (352)
Q Consensus 15 ~~~~~n~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~---~~~v~~Ll~~g-~~~~ 89 (352)
.+.++|. .|..|+||||+|+..|+.++|++||++|+++ +.+|..|+||||+|+..|+ .++++.|++++ .+++
T Consensus 119 ~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~---n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~ 195 (327)
T 1sw6_A 119 TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR---LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI 195 (327)
T ss_dssp SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG
T ss_pred cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc
Confidence 3578999 8999999999999999999999999999995 5677999999999999998 78888888876 7899
Q ss_pred CcCCCCChHHHHHHH----cCcHHHHHHHHhc--------------------CCCcccccccccCcHHHHHHHcCCHHHH
Q psy5490 90 EVNDEGYTPLMEAAR----EGHEEMVCVLLQK--------------------GAKINAHTEETQETALTLACCGGFLDVA 145 (352)
Q Consensus 90 ~~d~~G~t~L~~A~~----~g~~~~v~~Ll~~--------------------g~~~~~~~~~~g~t~L~~A~~~g~~~~v 145 (352)
.+|..|+||||+|+. .|+.+++++|++. |++++. .+..|.||||+|+. +
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~-~~~~g~t~L~~a~~------~ 268 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND-KNGERKDSILENLD------L 268 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------H
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc-ccccCCChhHHHHH------H
Confidence 999999999999999 8999999999987 888888 47789999999985 8
Q ss_pred HHHHHcCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHH
Q psy5490 146 DFLLKNGANI-ELGASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEF 196 (352)
Q Consensus 146 ~~Ll~~g~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~ 196 (352)
++|++++.+. |..|+||||+|+..|+.++|++|+++|++....+..+.+++
T Consensus 269 ~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL 320 (327)
T 1sw6_A 269 KWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPV 320 (327)
T ss_dssp HHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred HHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 9999996553 55799999999999999999999999999988887766554
No 64
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=7.2e-31 Score=230.07 Aligned_cols=161 Identities=22% Similarity=0.207 Sum_probs=118.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHH
Q psy5490 23 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEA 102 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A 102 (352)
+..|.||||.|+..|+.++++.|+++|++++ . +..|.|+||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~---~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVK---F-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNA 77 (239)
T ss_dssp ---------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcc---c-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 3468999999999999999999999999964 2 26789999999999999999999999999999999999999999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCC-CHHHHH--HHcCCHHHHH
Q psy5490 103 AREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GAS-TPLMEA--AQEGHLELVR 176 (352)
Q Consensus 103 ~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~-t~L~~A--~~~~~~~~v~ 176 (352)
+..|+.+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++. .|. ||||+| +..|+.++++
T Consensus 78 ~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp HHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 999999999999999999998 477899999999999999999999999999865 344 999999 7889999999
Q ss_pred HHHHcCCCcccc
Q psy5490 177 YLLDSGAQEMQT 188 (352)
Q Consensus 177 ~Ll~~ga~~~~~ 188 (352)
+|+++|++....
T Consensus 157 ~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 157 FLYGVQEKMGIM 168 (239)
T ss_dssp HHHHHHHHTTTT
T ss_pred HHHHhhhccccc
Confidence 999999876654
No 65
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.7e-29 Score=207.36 Aligned_cols=146 Identities=28% Similarity=0.312 Sum_probs=132.2
Q ss_pred CCCccHHHHHHcC-------------CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHH
Q psy5490 4 DSFESPLTLAACG-------------GHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAA 70 (352)
Q Consensus 4 ~~g~t~L~lA~~~-------------~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~ 70 (352)
+...|+||.|+.. .++|..|..|+||||+|+. |+.+++++|+++|+++ +.++..|+||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP---DLKDRTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC---CCCCCCCCCHHHHHH
Confidence 4567899999964 4567778999999999999 9999999999999995 667789999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCc-ccccccccCcHHHHHHHcCCHHHHHHHH
Q psy5490 71 CGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKI-NAHTEETQETALTLACCGGFLDVADFLL 149 (352)
Q Consensus 71 ~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 149 (352)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++. +. .+..|.||||+|+..|+.+++++|+
T Consensus 79 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH-RNHKGDTACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999984 65 5778999999999999999999999
Q ss_pred HcCCC
Q psy5490 150 KNGAN 154 (352)
Q Consensus 150 ~~g~~ 154 (352)
++|++
T Consensus 158 ~~GAd 162 (162)
T 1ihb_A 158 ANGAG 162 (162)
T ss_dssp HTC--
T ss_pred HhCCC
Confidence 99985
No 66
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=5.3e-30 Score=231.31 Aligned_cols=174 Identities=25% Similarity=0.319 Sum_probs=156.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHH
Q psy5490 23 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEA 102 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A 102 (352)
+..|.|+||+||..|++++|++|+++|+++ +..+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADI---NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAA 113 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCT---TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 557789999999999999999999999995 56678999999999999999999999999999999999999999999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHH-cCCCC--------------------------
Q psy5490 103 AREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLK-NGANI-------------------------- 155 (352)
Q Consensus 103 ~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~-------------------------- 155 (352)
+..|+.+++++|+++|++++. .+..|.||||+|+..++.+++++|+. .+.++
T Consensus 114 ~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAHVGA-VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIND 192 (299)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHcCCHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcch
Confidence 999999999999999999998 57789999999999999999988775 33332
Q ss_pred ---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHHHHh
Q psy5490 156 ---ELGASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRK 200 (352)
Q Consensus 156 ---~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~ 200 (352)
+..|.||||+|+..|+.++|++|+++|++.+..+..+.++.....
T Consensus 193 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~ 240 (299)
T 1s70_B 193 VRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAA 240 (299)
T ss_dssp CCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH
T ss_pred hhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 236899999999999999999999999999988877776665543
No 67
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=5.7e-30 Score=204.46 Aligned_cols=133 Identities=26% Similarity=0.340 Sum_probs=114.9
Q ss_pred CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-C
Q psy5490 17 GHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDE-G 95 (352)
Q Consensus 17 ~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~-G 95 (352)
.++|..|..|.||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+. |+.+++++|+++|++++.+|.. |
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g 78 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP---NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATL 78 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTT
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc---CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCC
Confidence 577888888999999999999999999999998884 5566888999999999 9999999999999999988888 8
Q ss_pred ChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 96 YTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN 154 (352)
Q Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 154 (352)
+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|+|
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGARLDV-CDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCCCCC-CSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999998887 466788888888888888888888888764
No 68
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=2.5e-30 Score=213.21 Aligned_cols=148 Identities=30% Similarity=0.364 Sum_probs=132.7
Q ss_pred CCCCCCccHHHHHHcCCCC--------------CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHH
Q psy5490 1 MPTDSFESPLTLAACGGHV--------------NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPL 66 (352)
Q Consensus 1 ~~~~~g~t~L~lA~~~~~~--------------n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~L 66 (352)
|.|..|.|+||.|+..|++ +..+..|+||||+|+..|+.+++++|+++|+++ +..+..|+|||
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L 79 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV---HAKDKGGLVPL 79 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHH
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC---CccCCCCCCHH
Confidence 4678899999999987664 334677899999999999999999999999995 66778999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHH
Q psy5490 67 TLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVAD 146 (352)
Q Consensus 67 h~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 146 (352)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+. |+.++++
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~a~~-~~~~i~~ 157 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK-KNRDGNTPLDLVKD-GDTDIQD 157 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCTGGGSCT-TCHHHHH
T ss_pred HHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCChhHhHhc-CChHHHH
Confidence 999999999999999999999999999999999999999999999999999999998 57789999999877 9999999
Q ss_pred HHHHcCC
Q psy5490 147 FLLKNGA 153 (352)
Q Consensus 147 ~Ll~~g~ 153 (352)
+|+++|+
T Consensus 158 ~L~~~gA 164 (165)
T 3twr_A 158 LLRGDAA 164 (165)
T ss_dssp HHHTC--
T ss_pred HHhhccc
Confidence 9999875
No 69
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=2.8e-29 Score=207.28 Aligned_cols=146 Identities=25% Similarity=0.361 Sum_probs=136.0
Q ss_pred CCccHHHHHHcCCC-------------CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHH
Q psy5490 5 SFESPLTLAACGGH-------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAAC 71 (352)
Q Consensus 5 ~g~t~L~lA~~~~~-------------~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~ 71 (352)
.|.|+||.|+..|+ +|..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP---QLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC---CCcCCCCCcHHHHHHH
Confidence 58899999997655 5667899999999999999999999999999995 5567899999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHc
Q psy5490 72 GGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKN 151 (352)
Q Consensus 72 ~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 151 (352)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI-ETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 577899999999999999999999998
Q ss_pred CCC
Q psy5490 152 GAN 154 (352)
Q Consensus 152 g~~ 154 (352)
+.+
T Consensus 158 ~~~ 160 (167)
T 3v31_A 158 LLK 160 (167)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 70
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=4.6e-29 Score=206.64 Aligned_cols=146 Identities=36% Similarity=0.473 Sum_probs=133.3
Q ss_pred CCCCccHHHHHHcC-------------CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHH
Q psy5490 3 TDSFESPLTLAACG-------------GHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLA 69 (352)
Q Consensus 3 ~~~g~t~L~lA~~~-------------~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A 69 (352)
...+.++|+.|+.. .++|..|..|.||||+|+..|+.+++++|+++|+++ +..+..|+||||+|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV---NAVDHAGMTPLRLA 87 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCCCCHHHHH
Confidence 44567889999954 456777899999999999999999999999999985 56678999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHH
Q psy5490 70 ACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLL 149 (352)
Q Consensus 70 ~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 149 (352)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~ 166 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA-QDKFGKTAFDISIDNGNEDLAEILQ 166 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 5778999999999999999999999
Q ss_pred HcC
Q psy5490 150 KNG 152 (352)
Q Consensus 150 ~~g 152 (352)
++|
T Consensus 167 ~~G 169 (169)
T 2y1l_E 167 KLN 169 (169)
T ss_dssp TC-
T ss_pred HcC
Confidence 876
No 71
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=6.9e-30 Score=226.17 Aligned_cols=178 Identities=18% Similarity=0.171 Sum_probs=149.9
Q ss_pred CCCCChHHHHHHHcCCHHHH----HHHHHcCCCCCCcC-CCCCCCChHHHHHH---HcCCHHHHHHHHHcCCC-------
Q psy5490 23 TDSFESPLTLAACGGHVDLA----LLLIERGANIEEVN-MPTDSFESPLTLAA---CGGHVDLALLLIERGAN------- 87 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v----~~Ll~~g~~~~~~n-~~~~~g~t~Lh~A~---~~g~~~~v~~Ll~~g~~------- 87 (352)
+..++++||.||+.|+.++| ++|++.|++++..+ ..+..|+||||+|+ ..|+.++|++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 45789999999999999955 45555999875543 23577999999999 77999999999998744
Q ss_pred ----CCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccc-------------cccCcHHHHHHHcCCHHHHHHHHH
Q psy5490 88 ----IEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTE-------------ETQETALTLACCGGFLDVADFLLK 150 (352)
Q Consensus 88 ----~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-------------~~g~t~L~~A~~~g~~~~v~~Ll~ 150 (352)
++..|..|+||||+|+..|+.++|++|+++|++++.... ..|.||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 455566899999999999999999999999999998542 579999999999999999999999
Q ss_pred ---cCCCCCC---CCCCHHHHHHHcCC---------HHHHHHHHHcCCCc-------cccccccHHHHHHHh
Q psy5490 151 ---NGANIEL---GASTPLMEAAQEGH---------LELVRYLLDSGAQE-------MQTKHIDILEFKKRK 200 (352)
Q Consensus 151 ---~g~~~~~---~g~t~L~~A~~~~~---------~~~v~~Ll~~ga~~-------~~~~~~~~~~~~~~~ 200 (352)
+|++++. .|+||||+|+..++ .+++++|+++|++. ...+..+.+++....
T Consensus 162 ~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~ 233 (260)
T 3jxi_A 162 NGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAA 233 (260)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred ccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHH
Confidence 8998865 68999999999888 79999999999987 456666666555443
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=2.9e-31 Score=231.16 Aligned_cols=166 Identities=24% Similarity=0.266 Sum_probs=138.0
Q ss_pred HHcCCCCCCC---CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy5490 13 AACGGHVNMP---TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIE 89 (352)
Q Consensus 13 A~~~~~~n~~---d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~ 89 (352)
...+++++.. +.++.|+||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.++|++|+++|++++
T Consensus 5 l~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n 81 (229)
T 2vge_A 5 LRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP---SQPNEEGITALHNAICGANYSIVDFLITAGANVN 81 (229)
T ss_dssp -----CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 3456666654 456778999999999999999999999985 6677999999999999999999999999999999
Q ss_pred CcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHH--HHcCCHHHHHHHHHcCCCCCC---CCCCHHH
Q psy5490 90 EVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLA--CCGGFLDVADFLLKNGANIEL---GASTPLM 164 (352)
Q Consensus 90 ~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~ 164 (352)
.+|..|+||||+|+..|+.+++++|+++|++++...+..|+||||+| +..|+.+++++|+++|++++. .|.++++
T Consensus 82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence 99999999999999999999999999999999986566899999999 999999999999999887754 3445655
Q ss_pred HHHHcCCHHHHHHHHHcCCC
Q psy5490 165 EAAQEGHLELVRYLLDSGAQ 184 (352)
Q Consensus 165 ~A~~~~~~~~v~~Ll~~ga~ 184 (352)
.++..+ .+++|++.|++
T Consensus 162 ~~~~~~---~~~~ll~~ga~ 178 (229)
T 2vge_A 162 DYSAEF---GDELSFREGES 178 (229)
T ss_dssp CBCCSS---TTBCCBCTTCE
T ss_pred HHhhcc---ccccCcccccc
Confidence 433322 23556666665
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=2e-30 Score=227.30 Aligned_cols=174 Identities=20% Similarity=0.252 Sum_probs=132.6
Q ss_pred CCCCCccHHHHHHcCCCCCCC------------CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHH
Q psy5490 2 PTDSFESPLTLAACGGHVNMP------------TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLA 69 (352)
Q Consensus 2 ~~~~g~t~L~lA~~~~~~n~~------------d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A 69 (352)
|+..|.|+||.|+..++.+.+ +..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|
T Consensus 1 p~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 1 PEITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDP---SLPNDEGITALHNA 77 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC---CCCCTTSCCHHHHH
T ss_pred CCccccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHH
Confidence 467899999999988776554 456789999999999999999999999984 66779999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHH--HHcCCHHHHHH
Q psy5490 70 ACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLA--CCGGFLDVADF 147 (352)
Q Consensus 70 ~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A--~~~g~~~~v~~ 147 (352)
+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++......+.||||+| +..|+.+++++
T Consensus 78 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986555555999999 78899999999
Q ss_pred HHHcCCCCCC------------CCCCHHHHHHHcCCHHHHHHHHH
Q psy5490 148 LLKNGANIEL------------GASTPLMEAAQEGHLELVRYLLD 180 (352)
Q Consensus 148 Ll~~g~~~~~------------~g~t~L~~A~~~~~~~~v~~Ll~ 180 (352)
|+++|++++. .+.+++++++..|. ++++|.+
T Consensus 158 Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~ 200 (239)
T 1ycs_B 158 LYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHR 200 (239)
T ss_dssp HHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCC
T ss_pred HHHhhhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEe
Confidence 9999987643 46677777776665 3444433
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=4.7e-29 Score=208.49 Aligned_cols=150 Identities=28% Similarity=0.314 Sum_probs=136.7
Q ss_pred CCCccHHHHHHcCC--------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHH
Q psy5490 4 DSFESPLTLAACGG--------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLA 69 (352)
Q Consensus 4 ~~g~t~L~lA~~~~--------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A 69 (352)
..+.++||.||..| +++..|..|+||||+|+..|+.+++++|+++|+++ +..+..|+||||+|
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI---NVMNRGDDTPLHLA 79 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC---CCcCCCCCCHHHHH
Confidence 35778899998654 46677899999999999999999999999999995 66678999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHH
Q psy5490 70 ACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLL 149 (352)
Q Consensus 70 ~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 149 (352)
+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..++.+++++|+
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI-CNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB-CCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch-hccCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 5778999999999999999999999
Q ss_pred HcCCCCCC
Q psy5490 150 KNGANIEL 157 (352)
Q Consensus 150 ~~g~~~~~ 157 (352)
++|++++.
T Consensus 159 ~~g~~~~~ 166 (179)
T 3f6q_A 159 KMGQNLNR 166 (179)
T ss_dssp HTTCCCSC
T ss_pred HhhcCccc
Confidence 99999875
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=6.1e-29 Score=202.42 Aligned_cols=139 Identities=28% Similarity=0.363 Sum_probs=128.1
Q ss_pred CccHHHHHHcCCCCCC------------CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcC
Q psy5490 6 FESPLTLAACGGHVNM------------PTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGG 73 (352)
Q Consensus 6 g~t~L~lA~~~~~~n~------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g 73 (352)
+.++|+.|+..|++++ .+..|.||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR---DARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT---TCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcC
Confidence 4678999997666433 3778999999999999999999999999995 666789999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHH
Q psy5490 74 HVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148 (352)
Q Consensus 74 ~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 148 (352)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|
T Consensus 79 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 79 HANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT-QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998 577899999999999999999987
No 76
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=7.6e-29 Score=197.88 Aligned_cols=128 Identities=27% Similarity=0.402 Sum_probs=121.2
Q ss_pred cCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccc-cCcHH
Q psy5490 55 VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEET-QETAL 133 (352)
Q Consensus 55 ~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-g~t~L 133 (352)
++..+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++.. +.. |.|||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~-~~~~g~t~L 82 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCA-DPATLTRPV 82 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCC-BTTTTBCHH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCc-CCCCCCCHH
Confidence 46677999999999999999999999999999999999999999999999 9999999999999999984 666 89999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 134 TLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQ 184 (352)
Q Consensus 134 ~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 184 (352)
|+|+..|+.+++++|+++|++++. .|+||||+|+..++.+++++|+++|++
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999865 688999999999999999999999985
No 77
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=1.4e-29 Score=213.37 Aligned_cols=152 Identities=18% Similarity=0.159 Sum_probs=135.6
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CCCChHHHHHHHcCCH----HHHHHHHHcCCCCCCcCCCCChHHH
Q psy5490 26 FESPLTLAACGGHVDLALLLIERGANIEEVNMPT-DSFESPLTLAACGGHV----DLALLLIERGANIEEVNDEGYTPLM 100 (352)
Q Consensus 26 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~-~~g~t~Lh~A~~~g~~----~~v~~Ll~~g~~~~~~d~~G~t~L~ 100 (352)
+.++|+.|++.|+++.++.|++.+.+ ..+ ..|+||||+|+..|+. +++++|+++|++++.+|.+|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~-----~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE-----DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS-----CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc-----cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 46789999999999999999998764 233 6799999999999975 5999999999999999999999999
Q ss_pred HHHHcCc------HHHHHHHHhcCCCcccccccccC-cHHHHHHHcC-----CHHHHHHHHH-cCCCCCC---CCCCHHH
Q psy5490 101 EAAREGH------EEMVCVLLQKGAKINAHTEETQE-TALTLACCGG-----FLDVADFLLK-NGANIEL---GASTPLM 164 (352)
Q Consensus 101 ~A~~~g~------~~~v~~Ll~~g~~~~~~~~~~g~-t~L~~A~~~g-----~~~~v~~Ll~-~g~~~~~---~g~t~L~ 164 (352)
+|+..++ .+++++|+++|++++.+ +..|. ||||+|+..+ +.+++++|++ +|++++. .|+||||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~-d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITAL-YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSC-BGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCcc-CCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence 9999886 68999999999999994 67788 9999999954 4579999999 9999865 7899999
Q ss_pred HHHHcCCHHHHHHHHHcCC
Q psy5490 165 EAAQEGHLELVRYLLDSGA 183 (352)
Q Consensus 165 ~A~~~~~~~~v~~Ll~~ga 183 (352)
+|++.|+.++|++|+++..
T Consensus 160 ~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 160 FVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp HHHTTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHH
Confidence 9999999999999997653
No 78
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=4.2e-28 Score=217.10 Aligned_cols=148 Identities=25% Similarity=0.337 Sum_probs=137.0
Q ss_pred CCCCCCccHHHHHHcCC--------------CCCCCCCCCChHHHHHH-----HcCCHHHHHHHHHcCCCCCCcCCCCCC
Q psy5490 1 MPTDSFESPLTLAACGG--------------HVNMPTDSFESPLTLAA-----CGGHVDLALLLIERGANIEEVNMPTDS 61 (352)
Q Consensus 1 ~~~~~g~t~L~lA~~~~--------------~~n~~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~n~~~~~ 61 (352)
++|.+|+|+||+|+..| +++..|..|.||||+|+ ..++.+++++|++.|.+. +..+..
T Consensus 106 ~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~---~~~~~~ 182 (276)
T 4hbd_A 106 IADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN---AKASQA 182 (276)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT---CCCTTT
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc---cccCCC
Confidence 46899999999999654 66777999999999999 679999999999999874 556788
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHh-cCCCcccccccccCcHHHHHHHcC
Q psy5490 62 FESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQ-KGAKINAHTEETQETALTLACCGG 140 (352)
Q Consensus 62 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~g 140 (352)
|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|++++. .+..|.||||+|+..|
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~-~d~~g~TpL~~A~~~g 261 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL-TDRDGSTALMVALDAG 261 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC-CCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC-cCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999 8999998 5778999999999999
Q ss_pred CHHHHHHHHHcC
Q psy5490 141 FLDVADFLLKNG 152 (352)
Q Consensus 141 ~~~~v~~Ll~~g 152 (352)
+.+++++|++++
T Consensus 262 ~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 262 QSEIASMLYSRM 273 (276)
T ss_dssp CHHHHHHHHHHC
T ss_pred CHHHHHHHHhcc
Confidence 999999999975
No 79
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=6.1e-28 Score=196.85 Aligned_cols=140 Identities=29% Similarity=0.357 Sum_probs=129.4
Q ss_pred CccHHHHHHcCC--------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHH
Q psy5490 6 FESPLTLAACGG--------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAAC 71 (352)
Q Consensus 6 g~t~L~lA~~~~--------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~ 71 (352)
+.|+||.|+..| +++..|..|+||||+ +..|+.+++++|+++|+++ +..|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP---NVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHH
Confidence 467888888543 567779999999999 9999999999999999995 6677899999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHc
Q psy5490 72 GGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKN 151 (352)
Q Consensus 72 ~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 151 (352)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++. .+..|.||||+|+..|+.+++++|+++
T Consensus 78 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~-~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR-RDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC-CCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999 99988 577899999999999999999999975
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=8.8e-29 Score=202.28 Aligned_cols=140 Identities=26% Similarity=0.308 Sum_probs=110.4
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCh-H
Q psy5490 20 NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYT-P 98 (352)
Q Consensus 20 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t-~ 98 (352)
+..+..|.||||+|+..|+.++|++|+++|+++ +..+..|+||||+|+ .|+.++|++|+++|++++.+|..|+| |
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttp 81 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANP---NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRP 81 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT---TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 344678899999999999999999999999884 556788999999985 89999999999999999999999998 9
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHH
Q psy5490 99 LMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLM 164 (352)
Q Consensus 99 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~ 164 (352)
||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++. .|.|+.+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGARLDV-RDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 9999999999999999999999987 466788999999999999999999999988755 4556655
No 81
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=1.8e-27 Score=186.43 Aligned_cols=126 Identities=42% Similarity=0.660 Sum_probs=104.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHH
Q psy5490 25 SFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAR 104 (352)
Q Consensus 25 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~ 104 (352)
+|+||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC---CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Confidence 4788888888888888888888888874 5556788888888888888888888888888888888888888888888
Q ss_pred cCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 105 EGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN 154 (352)
Q Consensus 105 ~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 154 (352)
.|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cChHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 8888888888888888887 466678888888888888888888887764
No 82
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=7.8e-28 Score=192.00 Aligned_cols=126 Identities=33% Similarity=0.483 Sum_probs=98.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHH
Q psy5490 23 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEA 102 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A 102 (352)
...+.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV---NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 345678888888888888888888888774 55567788888888888888888888888888888888888888888
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcC
Q psy5490 103 AREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNG 152 (352)
Q Consensus 103 ~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 152 (352)
+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNA-QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHHcCCCCcC-cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 888888888888888888876 4566777777777777777777777765
No 83
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=2e-28 Score=213.17 Aligned_cols=148 Identities=19% Similarity=0.174 Sum_probs=129.9
Q ss_pred HHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCc
Q psy5490 42 ALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKI 121 (352)
Q Consensus 42 v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~ 121 (352)
|+.||++|++++..+..+..+.|+||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 57889999998887878888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC----CCCCHHHHH--HHcCCHHHHHHHHHcCCCcccccc
Q psy5490 122 NAHTEETQETALTLACCGGFLDVADFLLKNGANIEL----GASTPLMEA--AQEGHLELVRYLLDSGAQEMQTKH 190 (352)
Q Consensus 122 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----~g~t~L~~A--~~~~~~~~v~~Ll~~ga~~~~~~~ 190 (352)
+. .+..|+||||+|+..|+.+++++|+++|++++. .|+||||+| +..|+.+++++|+++|++....+.
T Consensus 81 n~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~ 154 (229)
T 2vge_A 81 NS-PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNS 154 (229)
T ss_dssp TC-CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGG
T ss_pred CC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccC
Confidence 98 467899999999999999999999999999854 688999999 999999999999999988776543
No 84
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=1.3e-28 Score=225.79 Aligned_cols=157 Identities=17% Similarity=0.135 Sum_probs=127.4
Q ss_pred CCCCCccHHHHHHc-------------CCCCCCCCCCCChHHHHHHHcCC---HHHHHHHHHcC-CCCCCcCCCCCCCCh
Q psy5490 2 PTDSFESPLTLAAC-------------GGHVNMPTDSFESPLTLAACGGH---VDLALLLIERG-ANIEEVNMPTDSFES 64 (352)
Q Consensus 2 ~~~~g~t~L~lA~~-------------~~~~n~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~g-~~~~~~n~~~~~g~t 64 (352)
+|.+|+||||+||. |.++|..|.+|+||||+|+..|+ .++++.|++.+ .+ ++..|..|+|
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~---~~~~d~~g~t 203 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC---LILEDSMNRT 203 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG---GGEECTTCCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc---ccCCCCCCCC
Confidence 58899999999996 45677789999999999999998 78888888887 44 5677899999
Q ss_pred HHHHHHH----cCCHHHHHHHHHc--------------------CCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCC
Q psy5490 65 PLTLAAC----GGHVDLALLLIER--------------------GANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAK 120 (352)
Q Consensus 65 ~Lh~A~~----~g~~~~v~~Ll~~--------------------g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~ 120 (352)
|||+|+. .|+.+++++|++. |++++.++..|+||||+|+. +++|+++ +
T Consensus 204 pLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~ 275 (327)
T 1sw6_A 204 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--M 275 (327)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--T
T ss_pred HHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--C
Confidence 9999999 8999999999987 89999999999999999986 8999998 4
Q ss_pred cccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcC
Q psy5490 121 INAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEG 170 (352)
Q Consensus 121 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~ 170 (352)
++. .+..|+||||+|+..|+.+++++|+++|++++. .|+||||+|++.|
T Consensus 276 ~n~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 276 LNA-QDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTC-CCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 666 467899999999999999999999999999865 7899999998764
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=8.1e-27 Score=182.62 Aligned_cols=123 Identities=44% Similarity=0.697 Sum_probs=117.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcC
Q psy5490 61 SFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGG 140 (352)
Q Consensus 61 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g 140 (352)
+|+|+||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcC
Confidence 489999999999999999999999999999999999999999999999999999999999998 4678999999999999
Q ss_pred CHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 141 FLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQ 184 (352)
Q Consensus 141 ~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 184 (352)
+.+++++|+++|++++. .|.|||++|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999998754 688999999999999999999999985
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=5.7e-27 Score=186.98 Aligned_cols=123 Identities=33% Similarity=0.444 Sum_probs=115.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHH
Q psy5490 59 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACC 138 (352)
Q Consensus 59 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 138 (352)
...+.|+||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA-VDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999998 46789999999999
Q ss_pred cCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcC
Q psy5490 139 GGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSG 182 (352)
Q Consensus 139 ~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g 182 (352)
.|+.+++++|+++|++++. .|+||||+|+..|+.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999754 6899999999999999999999986
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=9e-28 Score=196.24 Aligned_cols=137 Identities=27% Similarity=0.340 Sum_probs=115.5
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCc-HHHH
Q psy5490 57 MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQET-ALTL 135 (352)
Q Consensus 57 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t-~L~~ 135 (352)
..+..|.|+||+|+..|+.++|++|+++|++++.+|..|+||||+|+ .|+.+++++|+++|++++. .+..|.| |||+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~-~d~~g~ttpL~~ 84 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC-ADPATLTRPVHD 84 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-CCTTTCCCHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHH
Confidence 34578999999999999999999999999999999999999999985 8999999999999999998 4677888 9999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHH
Q psy5490 136 ACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILE 195 (352)
Q Consensus 136 A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~ 195 (352)
|+..|+.+++++|+++|++++. .|+||||+|+..|+.+++++|+++|++....+..+...
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcc
Confidence 9999999999999999999865 68899999999999999999999999988777666554
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=3e-28 Score=214.15 Aligned_cols=160 Identities=23% Similarity=0.185 Sum_probs=138.6
Q ss_pred CccHHHHHHcCCCCCC----------CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCH
Q psy5490 6 FESPLTLAACGGHVNM----------PTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHV 75 (352)
Q Consensus 6 g~t~L~lA~~~~~~n~----------~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~ 75 (352)
+.+++.+++..|+... ++.+|.||||+|+..|+.+++++|++ |+++ +.+|..|+||||+|+..|+.
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~---~~~d~~g~t~L~~A~~~g~~ 90 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDV---DAVDENGRTALLFVAGLGSD 90 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT---TCBCTTSCBHHHHHHHHTCH
T ss_pred CccHHHHHHHcCCCcccccccccccccccCCCCHHHHHHHcCCHHHHHHHHc-CCCC---CCcCCCCCCHHHHHHHCCCH
Confidence 4445555566666554 24578999999999999999999999 8884 66778999999999999999
Q ss_pred HHHHHHHHcCCCCCCcC-CCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 76 DLALLLIERGANIEEVN-DEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN 154 (352)
Q Consensus 76 ~~v~~Ll~~g~~~~~~d-~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 154 (352)
++|++|+++|++++.++ ..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..++ .
T Consensus 91 ~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~~~---------~--- 157 (244)
T 3ui2_A 91 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV-EDERGLTALELAREILK---------T--- 157 (244)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHHT---------T---
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHHHh---------c---
Confidence 99999999999999998 7899999999999999999999999999998 57789999999986322 1
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 155 IELGASTPLMEAAQEGHLELVRYLLDSGAQ 184 (352)
Q Consensus 155 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 184 (352)
..+.++|++|+..|+.+++++|++++.+
T Consensus 158 --~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 158 --TPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp --CCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred --cCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 2378999999999999999999997654
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=1.7e-27 Score=190.12 Aligned_cols=127 Identities=24% Similarity=0.290 Sum_probs=81.7
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHH
Q psy5490 21 MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLM 100 (352)
Q Consensus 21 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~ 100 (352)
..|..|+||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP---NVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHH
Confidence 45666666777776666666777666666663 445566666666666666666666666666666666666666666
Q ss_pred HHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHc
Q psy5490 101 EAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKN 151 (352)
Q Consensus 101 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 151 (352)
+|+..|+.+++++|+++|++++. .+..|.||||+|+..+..+++++|.+.
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYGASRNA-VNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 66666666666666666666665 355566666666666666665555544
No 90
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=3.8e-29 Score=232.80 Aligned_cols=174 Identities=17% Similarity=0.069 Sum_probs=141.3
Q ss_pred ccHHHHHHcC-CCCCC------CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHH
Q psy5490 7 ESPLTLAACG-GHVNM------PTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLAL 79 (352)
Q Consensus 7 ~t~L~lA~~~-~~~n~------~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~ 79 (352)
.++++.|... ++... .+.+++||||+|+..|+.++|++|+++|+.....+..+..|+||||+|+..|+.++|+
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~ 145 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLN 145 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHH
Confidence 3466666653 34332 2566789999999999999999999999843323334467889999999999999999
Q ss_pred HHHHcCCCC---CCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCccc-ccccccCcHHHHHH-HcCCHHHHHHHHHcCCC
Q psy5490 80 LLIERGANI---EEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINA-HTEETQETALTLAC-CGGFLDVADFLLKNGAN 154 (352)
Q Consensus 80 ~Ll~~g~~~---~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~-~~g~~~~v~~Ll~~g~~ 154 (352)
+|+++|+++ +..+.+ +||||+|+..|+.++|++|+++|++++. ..+..|.||||+|+ ..|+.++|++|+++|++
T Consensus 146 ~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 146 RLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred HHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence 999999763 222223 8999999999999999999999999775 13556899999999 99999999999998753
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q psy5490 155 IELGASTPLMEAAQEGHLELVRYLLDSGAQE 185 (352)
Q Consensus 155 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 185 (352)
|.|||++|+..|+.+++++|+++|++.
T Consensus 225 ----~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 225 ----LAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp ----HHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred ----cchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 789999999999999999999998764
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=7.3e-27 Score=196.06 Aligned_cols=140 Identities=24% Similarity=0.226 Sum_probs=127.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCChHHHH
Q psy5490 23 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVN-DEGYTPLME 101 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d-~~G~t~L~~ 101 (352)
+.+|+||||+|+..|+.+++++|++ |+++ +..|..|+||||+|+..|+.++|++|+++|++++.++ ..|+||||+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~---~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV---DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence 5578999999999999999999999 8884 6677999999999999999999999999999999998 899999999
Q ss_pred HHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy5490 102 AAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDS 181 (352)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 181 (352)
|+..|+.+++++|+++|++++. .+..|.||||+|+..++. ..+.++|++|+..|+.+++++|.++
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~--------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADIEV-EDERGLTALELAREILKT--------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHHHT--------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhcCcHHHHHHHHHcCCCCcC-CCCCCCCHHHHHHHhccC--------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 9999999999999999999998 577899999999975322 1267999999999999999999865
No 92
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=7.5e-28 Score=202.71 Aligned_cols=147 Identities=14% Similarity=0.064 Sum_probs=127.5
Q ss_pred CccHHHHHHcCCCC-----------CCCC-CCCChHHHHHHHcCCH----HHHHHHHHcCCCCCCcCCCCCCCChHHHHH
Q psy5490 6 FESPLTLAACGGHV-----------NMPT-DSFESPLTLAACGGHV----DLALLLIERGANIEEVNMPTDSFESPLTLA 69 (352)
Q Consensus 6 g~t~L~lA~~~~~~-----------n~~d-~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A 69 (352)
+.++|+.|+..|++ +..+ ..|+||||+|+..|+. +++++||++|+++ |.+|..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv---n~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI---KSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS---SCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC---CCCCCCCCcHHHHH
Confidence 35678888876664 4445 6799999999999985 5999999999995 66779999999999
Q ss_pred HHcCC------HHHHHHHHHcCCCCCCcCCCCC-hHHHHHHHcC-----cHHHHHHHHh-cCCCcccccccccCcHHHHH
Q psy5490 70 ACGGH------VDLALLLIERGANIEEVNDEGY-TPLMEAAREG-----HEEMVCVLLQ-KGAKINAHTEETQETALTLA 136 (352)
Q Consensus 70 ~~~g~------~~~v~~Ll~~g~~~~~~d~~G~-t~L~~A~~~g-----~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A 136 (352)
+..|+ .++|++|+++|++++.+|..|+ ||||+|+..+ +.+++++|++ +|++++. .+..|.||||+|
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~-~d~~G~TpL~~A 161 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI-KDKWGLTALEFV 161 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC-CCTTSCCHHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc-cCCCCCCHHHHH
Confidence 99987 6899999999999999999999 9999999944 4679999999 9999998 577899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCC
Q psy5490 137 CCGGFLDVADFLLKNGANIE 156 (352)
Q Consensus 137 ~~~g~~~~v~~Ll~~g~~~~ 156 (352)
+..|+.+++++|+++..+.+
T Consensus 162 ~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 162 KRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HTTTCHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHHh
Confidence 99999999999998754433
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.5e-26 Score=184.66 Aligned_cols=126 Identities=25% Similarity=0.339 Sum_probs=114.9
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHH
Q psy5490 57 MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLA 136 (352)
Q Consensus 57 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 136 (352)
.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A 83 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT-TGYQNDSPLHDA 83 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCGGGCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-cCCCCCCHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999999999998 577899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy5490 137 CCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGA 183 (352)
Q Consensus 137 ~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga 183 (352)
+..|+.+++++|+++|++++. .|.|||++|+..+..+++++|.+.+.
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999999754 78999999999999999998877654
No 94
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=3.6e-29 Score=232.96 Aligned_cols=144 Identities=21% Similarity=0.145 Sum_probs=122.4
Q ss_pred CCCCccHHHHHHcCCCCCC----------------CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHH
Q psy5490 3 TDSFESPLTLAACGGHVNM----------------PTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPL 66 (352)
Q Consensus 3 ~~~g~t~L~lA~~~~~~n~----------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~L 66 (352)
+.+++|+||+|+..|++++ .+..|.||||+|+..|+.++|++|+++|+++...+..+.+ +|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 3467899999998887543 2446789999999999999999999999764322222233 8999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCC--cCCCCChHHHHHH-HcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHH
Q psy5490 67 TLAACGGHVDLALLLIERGANIEE--VNDEGYTPLMEAA-REGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLD 143 (352)
Q Consensus 67 h~A~~~g~~~~v~~Ll~~g~~~~~--~d~~G~t~L~~A~-~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~ 143 (352)
|+|+..|+.++|++|+++|++++. .|..|+||||+|+ ..|+.++|++|+++|+ .|.||||+|+..|+.+
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~e 239 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKY 239 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTT
T ss_pred HHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHH
Confidence 999999999999999999999887 8889999999999 9999999999999763 2789999999999999
Q ss_pred HHHHHHHcCCCC
Q psy5490 144 VADFLLKNGANI 155 (352)
Q Consensus 144 ~v~~Ll~~g~~~ 155 (352)
++++|+++|+++
T Consensus 240 vv~lL~~~ga~~ 251 (376)
T 2aja_A 240 VNPFIARHVNRL 251 (376)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhcCccc
Confidence 999999887543
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=2.4e-26 Score=208.18 Aligned_cols=143 Identities=21% Similarity=0.166 Sum_probs=120.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCcC---CCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCChHH
Q psy5490 26 FESPLTLAACGGHVDLALLLIERGANIEEVN---MPTDSFESPLTLAACG---GHVDLALLLIERGANIEEVNDEGYTPL 99 (352)
Q Consensus 26 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n---~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~d~~G~t~L 99 (352)
..++|+.|+..|+++.+++|++.|++++... ..+..|+||||+|+.. |++++|++|+++|++++.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 4577999999999999999999999864310 0468899999999987 899999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCHHHHHHHcCCH
Q psy5490 100 MEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHL 172 (352)
Q Consensus 100 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~g~t~L~~A~~~~~~ 172 (352)
|+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++ .|.||||+|+.+|+.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGT-VNEAGETALDIARKKHHKECEELLEQAQAG---TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSC-CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---TTSSCCC--------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---CCCChhHHHHhcCCc
Confidence 999999999999999999999998 577899999999999999999999999887 378999999988864
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=5.3e-27 Score=202.84 Aligned_cols=134 Identities=23% Similarity=0.355 Sum_probs=90.8
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhc-CCCcccccccccCcHHHHHHH
Q psy5490 60 DSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQK-GAKINAHTEETQETALTLACC 138 (352)
Q Consensus 60 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~ 138 (352)
..|.|+||+|+..|+.++|++|++.|++++.+|..|+||||+|+..|+.++|++|+++ |++++. .+..|+||||+|+.
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ-QNKLGDTALHAAAW 149 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC-CCTTSCCHHHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc-cCCCCCCHHHHHHH
Confidence 4567788888888888888888888888877777788888888888888888888877 777776 46667788888888
Q ss_pred cCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHH
Q psy5490 139 GGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDIL 194 (352)
Q Consensus 139 ~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~ 194 (352)
.|+.+++++|+++|++++. .|.|||++|+..++.++++.|++.|+.....+..+.+
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~l 208 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYL 208 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC------------------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhhc
Confidence 8888888888888777644 5778888888888888888888888877665555444
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=1.4e-25 Score=175.61 Aligned_cols=112 Identities=26% Similarity=0.347 Sum_probs=92.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHH
Q psy5490 23 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEA 102 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A 102 (352)
+..|.|+||+|+..|+.+++++|++.|+++ +..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV---NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT---TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc---CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 446778888888888888888888888874 55667888888888888888888888888888888888888888888
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHH
Q psy5490 103 AREGHEEMVCVLLQKGAKINAHTEETQETALTLACC 138 (352)
Q Consensus 103 ~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 138 (352)
+..|+.+++++|+++|++++. .+..|.||||+|+.
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADKTV-KGPDGLTAFEATDN 115 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCC
T ss_pred HHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHhCC
Confidence 888888888888888888887 46678888888843
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1.4e-25 Score=193.94 Aligned_cols=131 Identities=24% Similarity=0.300 Sum_probs=113.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCChHHHH
Q psy5490 23 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIER-GANIEEVNDEGYTPLME 101 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~d~~G~t~L~~ 101 (352)
+..|.||||+|+..|+.++|++|++.|+++ +.+|..|+||||+|+..|+.++|++|+++ |++++.+|..|+||||+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGV---NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA 146 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCc---cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHH
Confidence 446789999999999999999999999984 66778999999999999999999999998 99999999999999999
Q ss_pred HHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy5490 102 AAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL 157 (352)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 157 (352)
|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.++++.|++.|+..+.
T Consensus 147 A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGARTDL-RNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp HHHHTCHHHHHHHHHHTCCSCC-CCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred HHHcCCHHHHHHHHHcCCCCcc-ccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 9999999999999999999998 577899999999999999999999999987654
No 99
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.91 E-value=2.6e-24 Score=208.11 Aligned_cols=136 Identities=22% Similarity=0.216 Sum_probs=84.3
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCc---CCCCCCCChHHHHHHH---cCCHHHHHHHHHcCCCCCCcCCCCChHHHH
Q psy5490 28 SPLTLAACGGHVDLALLLIERGANIEEV---NMPTDSFESPLTLAAC---GGHVDLALLLIERGANIEEVNDEGYTPLME 101 (352)
Q Consensus 28 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---n~~~~~g~t~Lh~A~~---~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~ 101 (352)
+.||.|+..|++++|+.||++|++++.. ...+..|+||||+||. .|+.++|++|+++|+++|.+|.+|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 5577777777777777777777664322 1125566777777754 666777777777777777777777777777
Q ss_pred HHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Q psy5490 102 AAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAA 167 (352)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~g~t~L~~A~ 167 (352)
|+..|+.++|++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. +|+|.+.
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~---~~~h~~~ 275 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGT-VNEAGETALDIARKKHHKECEELLEQAQAGTFA---FPLHVDY 275 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSC-CCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------
T ss_pred HHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC---Ccceeec
Confidence 7777777777777777777766 355666777777777777777777777766643 5665544
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=1.3e-24 Score=170.07 Aligned_cols=114 Identities=25% Similarity=0.332 Sum_probs=102.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHH
Q psy5490 59 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACC 138 (352)
Q Consensus 59 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 138 (352)
+..|.|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999998 47789999999999
Q ss_pred cCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHH
Q psy5490 139 GGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLE 173 (352)
Q Consensus 139 ~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~ 173 (352)
.|+.+++++|+++|++++. .|+|||++|...+..+
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 9999999999999998755 7899999995443333
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=1.8e-24 Score=193.69 Aligned_cols=125 Identities=21% Similarity=0.194 Sum_probs=83.8
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCC------CcCCCCChHHHHHHHc---CcHHHHHHHHhcCCCcccccccccC
Q psy5490 60 DSFESPLTLAACGGHVDLALLLIERGANIE------EVNDEGYTPLMEAARE---GHEEMVCVLLQKGAKINAHTEETQE 130 (352)
Q Consensus 60 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~------~~d~~G~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~g~ 130 (352)
....++|+.|+..|+++.++.|++.|++++ ..|..|+||||+|+.. |+.+++++|+++|++++. .+..|+
T Consensus 128 ~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-~d~~g~ 206 (278)
T 1dcq_A 128 AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-QTGKGS 206 (278)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-CCTTCC
T ss_pred chhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc-cCCCCC
Confidence 344566777777777777777777666633 3356677777777776 667777777777777766 355567
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q psy5490 131 TALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQE 185 (352)
Q Consensus 131 t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 185 (352)
||||+|+..|+.+++++|+++|++++. .|.||||+|+..|+.+++++|+++|++.
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 777777777777777777777776543 5667777777777777777777776654
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=2.5e-24 Score=199.60 Aligned_cols=145 Identities=21% Similarity=0.270 Sum_probs=116.7
Q ss_pred CCCCCCChHHHHHHHc-CCHHHHHHHHHcCCCCCCcCCCC--CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCh
Q psy5490 21 MPTDSFESPLTLAACG-GHVDLALLLIERGANIEEVNMPT--DSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYT 97 (352)
Q Consensus 21 ~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~n~~~--~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t 97 (352)
..+..+.|+||+|+.. |+++++++||++|+++ +..+ ..|+||||+|+..|++++|++|+++|++++.+|..|+|
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv---n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~T 270 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADALAHGADV---NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRG 270 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT---TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHHHcCCCC---CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 3345567899999999 9999999999999996 4444 78999999999999999999999999999999999999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCC------CCCCCCHHHHHHHc
Q psy5490 98 PLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI------ELGASTPLMEAAQE 169 (352)
Q Consensus 98 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~g~t~L~~A~~~ 169 (352)
|||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.+... +..+.|+++++...
T Consensus 271 pLh~A~~~g~~~~v~~LL~~Gad~~~-~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRGADLGA-RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHHHHcCcHHHHHHHHHCcCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999999999999999999998 5778999999999999999999999887432 12455777665543
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=4.6e-23 Score=184.45 Aligned_cols=126 Identities=20% Similarity=0.210 Sum_probs=118.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCC---cCCCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCChHHHH
Q psy5490 28 SPLTLAACGGHVDLALLLIERGANIEE---VNMPTDSFESPLTLAACG---GHVDLALLLIERGANIEEVNDEGYTPLME 101 (352)
Q Consensus 28 t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~n~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~ 101 (352)
++|+.|+..|+++.++.|++.|.++.. ++..+..|+||||+|+.. |+.++|++|+++|++++.+|..|+||||+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 689999999999999999999998653 455678899999999999 89999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 102 AAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN 154 (352)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 154 (352)
|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++
T Consensus 212 A~~~g~~~~v~~Ll~~gad~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRGKASIEI-ANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcCCCCCC-ccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999998 577899999999999999999999999984
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=3.1e-23 Score=153.99 Aligned_cols=92 Identities=43% Similarity=0.672 Sum_probs=59.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHc
Q psy5490 26 FESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAARE 105 (352)
Q Consensus 26 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~ 105 (352)
|+||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~---n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 566666666666666666666666663 44456666666666666666666666666666666666666666666666
Q ss_pred CcHHHHHHHHhcCCC
Q psy5490 106 GHEEMVCVLLQKGAK 120 (352)
Q Consensus 106 g~~~~v~~Ll~~g~~ 120 (352)
|+.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 666666666666653
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=7.2e-23 Score=198.00 Aligned_cols=135 Identities=20% Similarity=0.148 Sum_probs=114.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCc------CCCCChHHHHHHH---cCcHHHHHHHHhcCCCcccccccccCcH
Q psy5490 62 FESPLTLAACGGHVDLALLLIERGANIEEV------NDEGYTPLMEAAR---EGHEEMVCVLLQKGAKINAHTEETQETA 132 (352)
Q Consensus 62 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~------d~~G~t~L~~A~~---~g~~~~v~~Ll~~g~~~~~~~~~~g~t~ 132 (352)
..+.||.|+..|++++|+.|+++|++++.. |..|+||||+|+. .|+.++|++|+++|++++. .+..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~-~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC-CCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc-cCCCCCcH
Confidence 447899999999999999999999999987 8899999999976 8999999999999999998 47789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccHHHHH
Q psy5490 133 LTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFK 197 (352)
Q Consensus 133 L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~ 197 (352)
||+|+..|+.+++++|+++|++++. .|+||||+|+..|+.+++++|+++|++...........|.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~~~ 278 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWV 278 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeecccc
Confidence 9999999999999999999999865 6899999999999999999999999998876544444433
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=1.9e-24 Score=181.18 Aligned_cols=150 Identities=22% Similarity=0.189 Sum_probs=123.6
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCc--------CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHH
Q psy5490 33 AACGGHVDLALLLIERGANIEEV--------NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAR 104 (352)
Q Consensus 33 A~~~g~~~~v~~Ll~~g~~~~~~--------n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~ 104 (352)
|++.|..+++++|++.+...... ...+..|+||||+|+..|+.+++++|++ |++++.+|..|+||||+|+.
T Consensus 7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~ 85 (183)
T 3deo_A 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAG 85 (183)
T ss_dssp EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHH
T ss_pred HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHH
Confidence 34455566666666443321110 0113578999999999999999999999 99999999999999999999
Q ss_pred cCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHc
Q psy5490 105 EGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDS 181 (352)
Q Consensus 105 ~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ 181 (352)
.|+.+++++|+++|++++...+..|+||||+|+..|+.+++++|+++|++++. .|+||||+|++.++.+.++.+++.
T Consensus 86 ~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~ 165 (183)
T 3deo_A 86 LGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQF 165 (183)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHH
T ss_pred cCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHH
Confidence 99999999999999999986558899999999999999999999999999754 789999999988777666666655
Q ss_pred CC
Q psy5490 182 GA 183 (352)
Q Consensus 182 ga 183 (352)
++
T Consensus 166 a~ 167 (183)
T 3deo_A 166 GR 167 (183)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=5.4e-23 Score=152.67 Aligned_cols=93 Identities=43% Similarity=0.666 Sum_probs=83.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcC
Q psy5490 61 SFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGG 140 (352)
Q Consensus 61 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g 140 (352)
+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcC
Confidence 478999999999999999999999999999999999999999999999999999999999988 4677889999999999
Q ss_pred CHHHHHHHHHcCCC
Q psy5490 141 FLDVADFLLKNGAN 154 (352)
Q Consensus 141 ~~~~v~~Ll~~g~~ 154 (352)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999988874
No 108
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=2.1e-23 Score=183.12 Aligned_cols=130 Identities=22% Similarity=0.202 Sum_probs=115.0
Q ss_pred CCCccHHHHHHcCC------------CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CCCChHHHHHH
Q psy5490 4 DSFESPLTLAACGG------------HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPT-DSFESPLTLAA 70 (352)
Q Consensus 4 ~~g~t~L~lA~~~~------------~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~-~~g~t~Lh~A~ 70 (352)
..|+|+||+|+..| ++|..|..|+||||+|+..|+.++|++|+++|+++ +.++ ..|+||||+|+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL---DHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT---TCCCSSSCCCHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC---CcCCCCCCCCHHHHHH
Confidence 36889999999755 46777999999999999999999999999999995 5555 77999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHH
Q psy5490 71 CGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLK 150 (352)
Q Consensus 71 ~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 150 (352)
..|+.++|++|+++|++++.+|..|+||||+|+..++ ...+.++||+|+..|+.+++++|++
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence 9999999999999999999999999999999986222 2347899999999999999999999
Q ss_pred cCCC
Q psy5490 151 NGAN 154 (352)
Q Consensus 151 ~g~~ 154 (352)
++.+
T Consensus 182 ~~~~ 185 (244)
T 3ui2_A 182 QVFE 185 (244)
T ss_dssp HHEE
T ss_pred hccc
Confidence 7554
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=183.19 Aligned_cols=122 Identities=22% Similarity=0.186 Sum_probs=114.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCChHHHHHHHc---CcHHHHHHHHhcCCCcccccccccCcH
Q psy5490 62 FESPLTLAACGGHVDLALLLIERGANIEE------VNDEGYTPLMEAARE---GHEEMVCVLLQKGAKINAHTEETQETA 132 (352)
Q Consensus 62 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~------~d~~G~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~g~t~ 132 (352)
..++|+.|+..|++++|++|++.|++++. .+..|+||||+|+.. |+.+++++|+++|++++. .+..|+||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~-~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC-CCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC-CCCCCCCH
Confidence 45779999999999999999999999998 688999999999997 899999999999999998 46789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 133 LTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQ 184 (352)
Q Consensus 133 L~~A~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 184 (352)
||+|+..|+.+++++|+++|++++. .|.|||++|+..|+.+++++|+++|++
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 9999999999999999999999855 689999999999999999999998875
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=1.7e-22 Score=187.24 Aligned_cols=124 Identities=23% Similarity=0.252 Sum_probs=115.7
Q ss_pred CCCChHHHHHHHc-CCHHHHHHHHHcCCCCCCcC--CCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHH
Q psy5490 60 DSFESPLTLAACG-GHVDLALLLIERGANIEEVN--DEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLA 136 (352)
Q Consensus 60 ~~g~t~Lh~A~~~-g~~~~v~~Ll~~g~~~~~~d--~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 136 (352)
..+.|+||+|+.. |++++|++|+++|++++..+ ..|+||||+|+..|+.++|++|+++|++++. .+..|+||||+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-~d~~G~TpLh~A 275 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-ADSAGRGPLHHA 275 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHH
Confidence 3456899999999 99999999999999999998 8999999999999999999999999999998 577899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy5490 137 CCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQ 184 (352)
Q Consensus 137 ~~~g~~~~v~~Ll~~g~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 184 (352)
+..|+.+++++|+++|++++. .|.||||+|+..|+.+++++|++.+..
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999865 689999999999999999999988754
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=9.9e-23 Score=157.25 Aligned_cols=108 Identities=32% Similarity=0.491 Sum_probs=84.0
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHH
Q psy5490 21 MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLM 100 (352)
Q Consensus 21 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~ 100 (352)
..|.+|+||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV---NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEH 80 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS---SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 45677888888888888888888888888774 556677888888888888888888888888888888888888888
Q ss_pred HHHHcCcHHHHHHHHhcCCCcccccccccCcH
Q psy5490 101 EAAREGHEEMVCVLLQKGAKINAHTEETQETA 132 (352)
Q Consensus 101 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~ 132 (352)
+|+..|+.+++++|+++|++++.. +..|.++
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~~n~~-~~~~~~~ 111 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGADVNAR-SWGSSHH 111 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSSHHHH-SCCCC--
T ss_pred HHHHCCCHHHHHHHHHcCCCCCcC-Ccccccc
Confidence 888888888888888888888774 4445544
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=4.2e-22 Score=153.73 Aligned_cols=100 Identities=33% Similarity=0.492 Sum_probs=91.1
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHHH
Q psy5490 57 MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLA 136 (352)
Q Consensus 57 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 136 (352)
.+|.+|+|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-RSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-CCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999999999988 466788999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCC
Q psy5490 137 CCGGFLDVADFLLKNGANIEL 157 (352)
Q Consensus 137 ~~~g~~~~v~~Ll~~g~~~~~ 157 (352)
+..|+.+++++|+++|+++|.
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNA 103 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHH
T ss_pred HHCCCHHHHHHHHHcCCCCCc
Confidence 999999999999999988754
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.82 E-value=6.4e-20 Score=140.44 Aligned_cols=89 Identities=28% Similarity=0.433 Sum_probs=54.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHH
Q psy5490 23 TDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEA 102 (352)
Q Consensus 23 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A 102 (352)
|.+|+|+||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i---~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADV---AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 555666666666666666666666666653 34445666666666666666666666666666666666666666666
Q ss_pred HHcCcHHHHHHH
Q psy5490 103 AREGHEEMVCVL 114 (352)
Q Consensus 103 ~~~g~~~~v~~L 114 (352)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 666666666654
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=1.8e-19 Score=137.90 Aligned_cols=92 Identities=33% Similarity=0.450 Sum_probs=81.6
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHHHHHHhcCCCcccccccccCcHHHH
Q psy5490 56 NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTL 135 (352)
Q Consensus 56 n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 135 (352)
...+.+|.|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~ 96 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA-QDKFGKTAFDI 96 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cccCCCcHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999998 46678899999
Q ss_pred HHHcCCHHHHHHH
Q psy5490 136 ACCGGFLDVADFL 148 (352)
Q Consensus 136 A~~~g~~~~v~~L 148 (352)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999998876
No 115
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=88.62 E-value=1.8 Score=34.84 Aligned_cols=128 Identities=14% Similarity=0.079 Sum_probs=84.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCC-hHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHH
Q psy5490 26 FESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFE-SPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAR 104 (352)
Q Consensus 26 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~-t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~ 104 (352)
-++-|-+|+..|++++...+.+..-+ ..-| ..=..|...|++++++.-.++-.|+. ..+.+...
T Consensus 8 ~~~rF~LAL~lg~l~~A~e~a~~l~~--------~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~-------~L~~Ly~~ 72 (177)
T 3mkq_B 8 PHIRFDLALEYGNLDAALDEAKKLND--------SITWERLIQEALAQGNASLAEMIYQTQHSFD-------KLSFLYLV 72 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHCC--------HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-------HHHHHHHH
T ss_pred hHHHHHHHHhcCCHHHHHHHHHHhCC--------HHHHHHHHHHHHHcCChHHHHHHHHHhCCHH-------HHHHHHHH
Confidence 35678899999999988777664211 1223 33356668899999999888766654 24455555
Q ss_pred cCcHHHHHHHHhcCCCcccccccccCcHHHHHHHcCCH-HHHHHHHHcCCCCCCCCC--CHHHHHHHcCCHHHHHHHHH
Q psy5490 105 EGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFL-DVADFLLKNGANIELGAS--TPLMEAAQEGHLELVRYLLD 180 (352)
Q Consensus 105 ~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~g~--t~L~~A~~~~~~~~v~~Ll~ 180 (352)
.|+.+-++.|.+.. . ....-..+++.+-..|.+ +++++|++. |+ -+...|..+|..++.+-|++
T Consensus 73 tg~~e~L~kla~iA----~-~~g~~n~af~~~l~lGdv~~~i~lL~~~-------~r~~eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 73 TGDVNKLSKMQNIA----Q-TREDFGSMLLNTFYNNSTKERSSIFAEG-------GSLPLAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp HTCHHHHHHHHHHH----H-HTTCHHHHHHHHHHHTCHHHHHHHHHHT-------TCHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHH----H-HCccHHHHHHHHHHcCCHHHHHHHHHHC-------CChHHHHHHHHHcCcHHHHHHHHH
Confidence 67776666554431 0 111234677778777876 578888887 44 35567778888888887764
No 116
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=84.21 E-value=3.1 Score=39.42 Aligned_cols=140 Identities=16% Similarity=0.062 Sum_probs=81.0
Q ss_pred HHHHHHcCCHH----HHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcC-C-------------HHHHHHHHHcCCCCCCc
Q psy5490 30 LTLAACGGHVD----LALLLIERGANIEEVNMPTDSFESPLTLAACGG-H-------------VDLALLLIERGANIEEV 91 (352)
Q Consensus 30 L~~A~~~g~~~----~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g-~-------------~~~v~~Ll~~g~~~~~~ 91 (352)
|...++.|+++ +++.+.+.|..++. .-++.|..++... . .++++.+.+.|..+|..
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd~------~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ 106 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQ------YHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEA 106 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCCH------HHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCCH------hHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHH
Confidence 45555678864 45555666776533 2356666665432 1 35666777788877643
Q ss_pred CCCCChHHHHHHHcCcHHHHH----HHHhcCCCcccccccccCcHHHHHHHcCCHH----HHHHHHHcCCCCCCCCCC-H
Q psy5490 92 NDEGYTPLMEAAREGHEEMVC----VLLQKGAKINAHTEETQETALTLACCGGFLD----VADFLLKNGANIELGAST-P 162 (352)
Q Consensus 92 d~~G~t~L~~A~~~g~~~~v~----~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~~g~t-~ 162 (352)
.. .+.|...+..|..+.+. .+.+.|..++... ..+.|...+..|..+ +.+.+.+.|...|..-.+ .
T Consensus 107 ty--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t---yn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~L 181 (501)
T 4g26_A 107 TF--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS---YGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAAL 181 (501)
T ss_dssp HH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH---HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HH--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce---ehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 32 23445566778765444 4445677766531 235666678888865 444455677766653333 4
Q ss_pred HHHHHHcCCHHHHHHHHH
Q psy5490 163 LMEAAQEGHLELVRYLLD 180 (352)
Q Consensus 163 L~~A~~~~~~~~v~~Ll~ 180 (352)
+...++.|+.+-+..|++
T Consensus 182 i~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 182 LKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHHHHTTCHHHHHHHHH
T ss_pred HHHHhhCCCHHHHHHHHH
Confidence 445567788755544443
No 117
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=57.24 E-value=32 Score=32.27 Aligned_cols=101 Identities=14% Similarity=0.073 Sum_probs=59.6
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHH----HHHHHcCCCCCCcCCCCChHHHHHHHcCcHH----H
Q psy5490 39 VDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLA----LLLIERGANIEEVNDEGYTPLMEAAREGHEE----M 110 (352)
Q Consensus 39 ~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v----~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~----~ 110 (352)
.++++.+.+.|..++..- -.+.+...++.|+.+-+ +.+.+.|..++.... .+.|...++.|..+ +
T Consensus 90 ~~lf~~M~~~G~~Pd~~t-----yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l 162 (501)
T 4g26_A 90 FDIFKQMIVDKVVPNEAT-----FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEV 162 (501)
T ss_dssp HHHHHHHHHTTCCCCHHH-----HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCHHH-----HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHH
Confidence 357777888888754321 12445566788887644 444456776654331 23344456778765 4
Q ss_pred HHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHH
Q psy5490 111 VCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLL 149 (352)
Q Consensus 111 v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 149 (352)
.+.+.+.|..++... -.+.+...+..|+.+-+.-|+
T Consensus 163 ~~~M~~~G~~Pd~~t---y~~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 163 DAHMVESEVVPEEPE---LAALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHHHTTCCCCHHH---HHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHhcCCCCCHHH---HHHHHHHHhhCCCHHHHHHHH
Confidence 445556787776532 235666778888876444443
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=56.03 E-value=26 Score=31.87 Aligned_cols=63 Identities=22% Similarity=0.319 Sum_probs=33.5
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHHHHHHHcCcHHHH
Q psy5490 32 LAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMV 111 (352)
Q Consensus 32 ~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~~~v 111 (352)
+.+..|+...|+..+..|.|+.-. -|....+ |+.. .+ . -.-|.|.+|+|++..+.+++
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~-------lt~~e~~-----------lln~-~~--a-f~~g~tlvhlair~~r~~~l 85 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQ-------LTADEVR-----------LLNR-PS--A-FDVGYTLVHLAIRFQRQDML 85 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCC-------CCHHHHH-----------HHCC-TT--T-CCTTCCHHHHHHHTTCHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcc-------cCHHHHH-----------HhCC-Cc--c-cccCchhhhhhhhhhhhhHH
Confidence 334567888888777777775311 1111111 1111 11 1 12366777777777777776
Q ss_pred HHHHh
Q psy5490 112 CVLLQ 116 (352)
Q Consensus 112 ~~Ll~ 116 (352)
..|+.
T Consensus 86 ~~ll~ 90 (454)
T 3zrh_A 86 AILLT 90 (454)
T ss_dssp HHHHH
T ss_pred HHhhh
Confidence 66664
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=50.65 E-value=41 Score=30.57 Aligned_cols=24 Identities=21% Similarity=0.105 Sum_probs=17.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHH
Q psy5490 60 DSFESPLTLAACGGHVDLALLLIE 83 (352)
Q Consensus 60 ~~g~t~Lh~A~~~g~~~~v~~Ll~ 83 (352)
..|.|.+|+|++..+.+++-.|+.
T Consensus 67 ~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 67 DVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccCchhhhhhhhhhhhhHHHHhhh
Confidence 456777777777777777777765
No 120
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=45.10 E-value=4.5 Score=44.11 Aligned_cols=6 Identities=33% Similarity=0.589 Sum_probs=2.3
Q ss_pred HHHHHH
Q psy5490 98 PLMEAA 103 (352)
Q Consensus 98 ~L~~A~ 103 (352)
+|+.|+
T Consensus 1402 ~l~~aS 1407 (1752)
T 3h0g_A 1402 ALMRCS 1407 (1752)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 343333
No 121
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=42.63 E-value=5.2 Score=43.65 Aligned_cols=10 Identities=20% Similarity=0.049 Sum_probs=5.7
Q ss_pred CcHHHHHHHc
Q psy5490 130 ETALTLACCG 139 (352)
Q Consensus 130 ~t~L~~A~~~ 139 (352)
..+|..|...
T Consensus 1400 ~s~l~~aSFE 1409 (1752)
T 3h0g_A 1400 TGALMRCSFE 1409 (1752)
T ss_dssp SHHHHHHHHS
T ss_pred CCHHHHhhHH
Confidence 3566666654
No 122
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=33.88 E-value=29 Score=19.84 Aligned_cols=17 Identities=35% Similarity=0.403 Sum_probs=13.6
Q ss_pred HHHHHHcCCHHHHHHHH
Q psy5490 163 LMEAAQEGHLELVRYLL 179 (352)
Q Consensus 163 L~~A~~~~~~~~v~~Ll 179 (352)
+..|+..|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45788889999998885
No 123
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=33.65 E-value=31 Score=27.53 Aligned_cols=122 Identities=16% Similarity=0.119 Sum_probs=75.8
Q ss_pred ccHHHHHHcCCCCCCC--------CCCCChHH-HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCCChHHHHHHHcCCHHH
Q psy5490 7 ESPLTLAACGGHVNMP--------TDSFESPL-TLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDL 77 (352)
Q Consensus 7 ~t~L~lA~~~~~~n~~--------d~~g~t~L-~~A~~~g~~~~v~~Ll~~g~~~~~~n~~~~~g~t~Lh~A~~~g~~~~ 77 (352)
++-+-+|..-|+++.. +..-|.-| ..|...|++++++.-+.+-.|. ...+.+....|+.+-
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~----------~~L~~Ly~~tg~~e~ 78 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLNDSITWERLIQEALAQGNASLAEMIYQTQHSF----------DKLSFLYLVTGDVNK 78 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH----------HHHHHHHHHHTCHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCCHHHHHHHHHHHHHcCChHHHHHHHHHhCCH----------HHHHHHHHHhCCHHH
Confidence 3445566666665543 22223333 4566799999999998875542 244556666788887
Q ss_pred HHHHHHcCCCCCCcCCCCChHHHHHHHcCcH-HHHHHHHhcCCCcccccccccCcHHHHHHHcCCHHHHHHHHHc
Q psy5490 78 ALLLIERGANIEEVNDEGYTPLMEAAREGHE-EMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKN 151 (352)
Q Consensus 78 v~~Ll~~g~~~~~~d~~G~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 151 (352)
++.|.+.- ....+-+.+++.+...|+. +++++|++.|--.. +...|..+|..++.+-|++.
T Consensus 79 L~kla~iA----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~e---------A~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 79 LSKMQNIA----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPL---------AYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHH----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHH---------HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHH----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCChHH---------HHHHHHHcCcHHHHHHHHHH
Confidence 77665421 0111223577777777775 67888887754332 45677888988888777764
No 124
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=31.80 E-value=82 Score=30.83 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=17.0
Q ss_pred HHHHHHHcCCHH-HHHHHHHcCCCCCCCCCCHHHHHHHcCCHH
Q psy5490 132 ALTLACCGGFLD-VADFLLKNGANIELGASTPLMEAAQEGHLE 173 (352)
Q Consensus 132 ~L~~A~~~g~~~-~v~~Ll~~g~~~~~~g~t~L~~A~~~~~~~ 173 (352)
+.+.+...|..+ +++++++.+. -..++.+|..++..+
T Consensus 742 A~~~~~~~g~~~~a~~~~~~~~~-----~~~A~~lA~~~~~~~ 779 (814)
T 3mkq_A 742 AFNAYWIAGDIQGAKDLLIKSQR-----FSEAAFLGSTYGLGD 779 (814)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTTC-----HHHHHHHHHHTTCCH
T ss_pred HHHHHHHcCCHHHHHHHHHHcCC-----hHHHHHHHHHhCCCh
Confidence 344444444443 4444444321 124566666666544
No 125
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=25.92 E-value=48 Score=22.79 Aligned_cols=11 Identities=18% Similarity=0.359 Sum_probs=4.6
Q ss_pred HHHHHHcCCCC
Q psy5490 145 ADFLLKNGANI 155 (352)
Q Consensus 145 v~~Ll~~g~~~ 155 (352)
++||+.+..+.
T Consensus 53 ~ewL~~h~~D~ 63 (85)
T 2dkl_A 53 MSALLEKKVDV 63 (85)
T ss_dssp HHHHHTTSCCS
T ss_pred HHHHHHCcCCc
Confidence 44444444333
No 126
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=21.96 E-value=3.6 Score=39.19 Aligned_cols=18 Identities=17% Similarity=0.058 Sum_probs=9.4
Q ss_pred hhHHHHHHHHHHHhhhhc
Q psy5490 334 NNAVATLKTAVATLNRHC 351 (352)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~ 351 (352)
.+...+++|+|+..++..
T Consensus 82 ~~~~~~~~alyd~~~~~~ 99 (535)
T 2h8h_A 82 AGGVTTFVALYDYESRTE 99 (535)
T ss_dssp -----CEEESSCBCCCSS
T ss_pred CCCCcEEEEccccCCcCC
Confidence 345556788888776654
Done!