RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5490
(352 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 120 bits (302), Expect = 1e-31
Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 38/190 (20%)
Query: 29 PLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANI 88
PL +A+ GH+ + L++RGA+ N+ E+PL +AA GH ++A L++ A +
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGAS---PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59
Query: 89 EEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTE---------------------- 126
+ TPL AAR GH MV +LL+ A N T
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL 119
Query: 127 ----------ETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLE 173
+ T L +A G + VA+ LL+ A+ TPL A +L+
Sbjct: 120 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLD 179
Query: 174 LVRYLLDSGA 183
+V+ LL G
Sbjct: 180 IVKLLLPRGG 189
Score = 100 bits (250), Expect = 2e-24
Identities = 56/259 (21%), Positives = 88/259 (33%), Gaps = 69/259 (26%)
Query: 12 LAACGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVN--------------- 56
L H N + +PL +A ++D+ LL+ RG +
Sbjct: 151 LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQ 210
Query: 57 ---------------MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLME 101
+ +PL LAA GH ++ LL+ + AN N G TPL
Sbjct: 211 VEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHL 270
Query: 102 AAREGHEEMVCVLLQKGAKINAHTEETQ-------------------------------- 129
A+EGH + VL++ G ++A T
Sbjct: 271 VAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLG 330
Query: 130 ETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYL---LDSGA 183
+ L A G D+ LLKNGA+ +S TPL A + G++ + L D +
Sbjct: 331 YSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETS 390
Query: 184 QEMQTKHIDILEFKKRKQE 202
+ + F + E
Sbjct: 391 -FVLVSDKHRMSFPETVDE 408
Score = 98.9 bits (245), Expect = 9e-24
Identities = 61/217 (28%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 7 ESPLTLAACGGH-------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIE 53
E+PL +AA GH VN ++PL AA GH ++ LL+E AN
Sbjct: 34 ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPN 93
Query: 54 E------------------------------VNMPTDSFESPLTLAACGGHVDLALLLIE 83
T +PL +AA G V +A LL+E
Sbjct: 94 LATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLE 153
Query: 84 RGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLD 143
R A+ G TPL A + ++V +LL +G ++ T L +A ++
Sbjct: 154 RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWN-GYTPLHIAAKQNQVE 212
Query: 144 VADFLLKNGANIELGAS---TPLMEAAQEGHLELVRY 177
VA LL+ G + + TPL AAQEGH E+V
Sbjct: 213 VARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL 249
Score = 90.8 bits (224), Expect = 6e-21
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 8 SPLTLAACGGH-------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEE 54
+PL LAA GH N+ S +PL L A GHV +A +LI+ G
Sbjct: 233 TPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM--- 289
Query: 55 VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVL 114
V+ T +PL +A+ G++ L L++ A++ GY+PL +AA++GH ++V +L
Sbjct: 290 VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLL 349
Query: 115 LQKGAKINAHTEETQETALTLACCGGFLDVADFL---LKNGANIEL 157
L+ GA N + + T L +A G++ V D L + + +
Sbjct: 350 LKNGASPNEVSSD-GTTPLAIAKRLGYISVTDVLKVVTDETSFVLV 394
Score = 90.8 bits (224), Expect = 7e-21
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 97 TPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE 156
TPL A+ GH +V LLQ+GA N + ET L +A G +VA +LL+N A +
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVK-VETPLHMAARAGHTEVAKYLLQNKAKVN 60
Query: 157 LGAS---TPLMEAAQEGHLELVRYLLDSGAQEMQTKH 190
A TPL AA+ GH +V+ LL++ A
Sbjct: 61 AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATT 97
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 101 bits (251), Expect = 3e-25
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 15 CGGHVNMPTDSFESPLTLAACGGHVDLA-LLLIERGANIEEVNMPTDSFESPLTLAACGG 73
+ L AA GHV++ +LL E GA++ + + L++
Sbjct: 137 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196
Query: 74 HVD-LALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLL-QKGAKINAHTEETQET 131
V+ + LL++ GA++ + G TPL+ A + H +V LL Q+ +IN + +T
Sbjct: 197 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD-GKT 255
Query: 132 ALTLACCGGFLDVADFLLKNGANIE 156
AL LA +A+ L K GA+ +
Sbjct: 256 ALLLAVELKLKKIAELLCKRGASTD 280
Score = 97.0 bits (240), Expect = 9e-24
Identities = 48/185 (25%), Positives = 72/185 (38%), Gaps = 17/185 (9%)
Query: 15 CGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFE-------SPLT 67
G VN + AA G V L +RGAN+ + E + L
Sbjct: 94 KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM 153
Query: 68 LAACGGHVDLA-LLLIERGANIEEVNDEG----YTPLMEAAREGHEEMVCVLLQKGAKIN 122
AA GHV++ +LL E GA++ ++ G L+ + E + +LL GA +N
Sbjct: 154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN 213
Query: 123 AHTEETQETALTLACCGGFLDVADFLL-KNGANIELGAS---TPLMEAAQEGHLELVRYL 178
E +T L LA L + LL + I S T L+ A + ++ L
Sbjct: 214 VRGER-GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 272
Query: 179 LDSGA 183
GA
Sbjct: 273 CKRGA 277
Score = 76.9 bits (188), Expect = 1e-16
Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 27 ESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGA 86
L A VDL L+E GAN+ + +PL A D+ LL+ GA
Sbjct: 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQE--EEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 87 NIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVAD 146
+ G TP + AA G +++ + L KGA +N TA A G +
Sbjct: 64 DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECD-FYGFTAFMEAAVYGKVKALK 122
Query: 147 FLLKNGANIE-------------LGASTPLMEAAQEGHLELVRYLLD 180
FL K GAN+ G +T LM+AA++GH+E+++ LLD
Sbjct: 123 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 169
Score = 62.7 bits (151), Expect = 1e-11
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 12 LAACGGHVNMPTDSFESPLTLAACGGHVDLALLLIER-GANIEEVNMPTDSFESPLTLAA 70
L G VN+ + ++PL LA H+ L L+E+ I N ++ L LA
Sbjct: 205 LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI---NDTDSDGKTALLLAV 261
Query: 71 CGGHVDLALLLIERGANIEEVN 92
+A LL +RGA+ + +
Sbjct: 262 ELKLKKIAELLCKRGASTDCGD 283
Score = 61.1 bits (147), Expect = 3e-11
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 94 EGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLL 149
E L++A + ++V LL+ GA +N EE T L A D+ + LL
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL 59
Score = 45.3 bits (106), Expect = 4e-06
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 12 LAACGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNM 57
L +N ++ L LA +A LL +RGA+ + ++
Sbjct: 239 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284
Score = 41.1 bits (95), Expect = 1e-04
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 161 TPLMEAAQEGHLELVRYLLDSGA 183
L++A Q ++LV+ LL+ GA
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGA 29
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 101 bits (253), Expect = 4e-25
Identities = 31/172 (18%), Positives = 51/172 (29%), Gaps = 18/172 (10%)
Query: 29 PLTLAACGGHVDLALLLIERGANIEE--------VNMPTDSFESPLTLAACGGH---VDL 77
+ L + LL A+ + E +AA G +D
Sbjct: 49 HIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDT 108
Query: 78 ALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQ-ETALTLA 136
LL+ ++ + E Y AA GH ++ L + + + A LA
Sbjct: 109 LCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLA 168
Query: 137 CCGGFLDVADFLLKNGANIEL------GASTPLMEAAQEGHLELVRYLLDSG 182
G L V + L + A GH ++ +LLD
Sbjct: 169 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 220
Score = 99 bits (248), Expect = 2e-24
Identities = 29/173 (16%), Positives = 53/173 (30%), Gaps = 14/173 (8%)
Query: 19 VNMPTDSFESPLTLAACGGH---VDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHV 75
+ E +AA G +D LL+ V + LAA GH+
Sbjct: 83 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEI---VKVIQAENYQAFRLAAENGHL 139
Query: 76 DLALLLIERGA--NIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQE--T 131
+ L E + + E Y AA GH ++ L + + +
Sbjct: 140 HVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA 199
Query: 132 ALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQ 184
A G +V +FLL + + + + G + ++ +
Sbjct: 200 FRWAAVGRGHHNVINFLLDCPVML----AYAEIHEFEYGEKYVNPFIARHVNR 248
Score = 97.3 bits (241), Expect = 2e-23
Identities = 37/227 (16%), Positives = 54/227 (23%), Gaps = 44/227 (19%)
Query: 7 ESPLTLAACGGH----------------VNMPTDSFESPLTLAACGGHVDLALLLIERGA 50
E +AA G V + LAA GH+ + L E
Sbjct: 91 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 150
Query: 51 NIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEV---NDEGYTPLMEAAREGH 107
LAA GH+ + L E + Y A GH
Sbjct: 151 TEIMAM-IQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 209
Query: 108 EEMVCVLLQKG---------AKINAHTEETQ------------ETALTLACCGGFLDVAD 146
++ LL A L+ G D+
Sbjct: 210 HNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVT 269
Query: 147 FLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDI 193
K+ L+ E L+ +R+LL + I
Sbjct: 270 ---KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATI 313
Score = 82.6 bits (203), Expect = 3e-18
Identities = 30/218 (13%), Positives = 56/218 (25%), Gaps = 52/218 (23%)
Query: 8 SPLTLAACGGHVN---------------MPTDSFESPLTLAACGGHVDLALLLIERGANI 52
LAA GH++ M LAA GH+ + L E
Sbjct: 128 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE 187
Query: 53 EEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVC 112
+ +++ + A GH ++ L++ + + G + +
Sbjct: 188 ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNP 240
Query: 113 VLLQKGAKI------------NAHTE----------ETQETALTLACCGGFLDVADFLLK 150
+ + ++ + + L LD FLL
Sbjct: 241 FIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLS 300
Query: 151 NGANIELGA--------STPLMEAAQEGHLELVRYLLD 180
L + L A + G+ LL
Sbjct: 301 IPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS 338
Score = 61.4 bits (148), Expect = 3e-11
Identities = 17/137 (12%), Positives = 30/137 (21%), Gaps = 17/137 (12%)
Query: 25 SFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIER 84
G + + ++E++ L+ G DL
Sbjct: 222 MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH-------DAFKLSNPDGVFDLV------ 268
Query: 85 GANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINA----HTEETQETALTLACCGG 140
+ L+ E + + LL L LA G
Sbjct: 269 TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLG 328
Query: 141 FLDVADFLLKNGANIEL 157
LL + + L
Sbjct: 329 NQGACALLLSIPSVLAL 345
Score = 57.2 bits (137), Expect = 8e-10
Identities = 14/130 (10%), Positives = 25/130 (19%), Gaps = 14/130 (10%)
Query: 5 SFESPLTLAACGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIE----EVNMPTD 60
G + A L + +
Sbjct: 222 MLAYAEIHEFEYGE----KYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGF 277
Query: 61 SFESPLTLAACGGHVDLALLLIERGA-----NIEEVNDEGYTPLMEAAREGHEEMVCVLL 115
L +D L+ + + L A R G++ +LL
Sbjct: 278 YMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLL 337
Query: 116 QKGAKINAHT 125
+ A T
Sbjct: 338 SIP-SVLALT 346
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 90.8 bits (224), Expect = 6e-22
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 8 SPLTLAACGGHVNMPTDSFESP-------------LTLAACGGHVDLALLLIERGANIEE 54
+ L A GH + + L +AA G ++ L+ +GA
Sbjct: 39 TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQ--- 95
Query: 55 VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVL 114
VN + +PL AA ++A++L+E GAN + + T + AA +G+ +M+ +L
Sbjct: 96 VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHIL 155
Query: 115 LQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGH 171
L A N E T L LAC ++ A L+ GA+I + TPL A+ G
Sbjct: 156 LYYKASTNIQDTE-GNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQ-VAKGGL 213
Query: 172 LELVRYLLD 180
+++ +++
Sbjct: 214 GLILKRMVE 222
Score = 69.2 bits (168), Expect = 2e-14
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Query: 69 AACGGHVD-LALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEE 127
A G ++ L ++ + + + T L A GH E+V L + ++
Sbjct: 10 LAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEF-LLQLGVPVNDKDD 68
Query: 128 TQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGA 183
+ L +A G ++ LL GA + TPL AA + E+ LL+ GA
Sbjct: 69 AGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA 127
Score = 28.4 bits (62), Expect = 1.3
Identities = 4/20 (20%), Positives = 9/20 (45%)
Query: 163 LMEAAQEGHLELVRYLLDSG 182
+ A G LE ++ + +
Sbjct: 7 VCNLAYSGKLEELKESILAD 26
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 89.8 bits (221), Expect = 2e-21
Identities = 45/208 (21%), Positives = 66/208 (31%), Gaps = 27/208 (12%)
Query: 7 ESPLTLAACGGHVNMPTDSFESPLT-------------LAACGGHVDLALLLIERGANIE 53
++ L LAA G + + + LA A +L++ +
Sbjct: 46 QTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHP 105
Query: 54 EV-----------NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEA 102
P S + + + +E N +G+TPL A
Sbjct: 106 RDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165
Query: 103 AREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS-- 160
EMV +L GA +N T L LA V + LLK GA+
Sbjct: 166 VIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGG 225
Query: 161 -TPLMEAAQEGHLELVRYLLDSGAQEMQ 187
TPL A + L R L GA E +
Sbjct: 226 RTPLGSALLRPNPILARLLRAHGAPEPE 253
Score = 76.7 bits (187), Expect = 1e-16
Identities = 38/214 (17%), Positives = 57/214 (26%), Gaps = 50/214 (23%)
Query: 20 NMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLAL 79
T+ ++ L LA H L+ A E +++ D ++ L LAA G
Sbjct: 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVE 62
Query: 80 LLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEET----------- 128
L GA + G+T L A R CVLLQ +T
Sbjct: 63 KLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122
Query: 129 --QETALTLACCGGFLDVADFLLKNGANIEL----------------------------- 157
A + + +E
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182
Query: 158 --------GASTPLMEAAQEGHLELVRYLLDSGA 183
TPL A + ++ LL +GA
Sbjct: 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA 216
Score = 45.5 bits (106), Expect = 4e-06
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 121 INAHTEETQETALTLACCGGFLDVADFLLKNGANIEL------GASTPLMEAAQEGHL 172
+ + E +TAL LA DFLL A E T L AA G
Sbjct: 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEA 58
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 80.1 bits (196), Expect = 1e-17
Identities = 34/188 (18%), Positives = 63/188 (33%), Gaps = 26/188 (13%)
Query: 19 VNMPTDSF-ESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLA----ACGG 73
+N+P D +PL +++L L++ G+N + ES L A
Sbjct: 99 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN---RLYGDNMGESCLVKAVKSVNNYD 155
Query: 74 HVDLALLLIERGANIEEVNDEGYTPL------------MEAAREGHEEMVCVLLQKGAKI 121
LL + + T L AA+ + ++ +++K +
Sbjct: 156 SGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRP 215
Query: 122 NAHTEETQETALTLACCGGFLDVADFLLKN---GANIELGAS---TPLMEAAQEGHLELV 175
+E+ + + L + S T L AA+ G++ +V
Sbjct: 216 IQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIV 275
Query: 176 RYLLDSGA 183
LLD GA
Sbjct: 276 DALLDYGA 283
Score = 62.4 bits (150), Expect = 1e-11
Identities = 16/94 (17%), Positives = 33/94 (35%)
Query: 10 LTLAACGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLA 69
+ + T+ ES + L + +N + ++ L +A
Sbjct: 207 WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIA 266
Query: 70 ACGGHVDLALLLIERGANIEEVNDEGYTPLMEAA 103
A G++ + L++ GA+ N G P+ A
Sbjct: 267 ARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 58.1 bits (139), Expect = 3e-10
Identities = 19/149 (12%), Positives = 39/149 (26%), Gaps = 14/149 (9%)
Query: 1 MPTDSFESPLTLAACGGHVNMPTDSFESPLTLAACGGH-------------VDLALLLIE 47
DS L + + + L + + ++ +
Sbjct: 152 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 211
Query: 48 RGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGH 107
+ I+ +S + ++ L + + G T L AAR G+
Sbjct: 212 QNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN 271
Query: 108 EEMVCVLLQKGAKINAHTEETQETALTLA 136
+V LL GA + +
Sbjct: 272 ISIVDALLDYGADPFIANKSGL-RPVDFG 299
Score = 55.8 bits (133), Expect = 2e-09
Identities = 26/183 (14%), Positives = 53/183 (28%), Gaps = 15/183 (8%)
Query: 1 MPTDSFESPLTLAACGGHVNMPT----DSFESPLTLAACGGHVDLALLLIERGANIEEVN 56
+ +D SPL + + E+ L ++ L +N
Sbjct: 10 LTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEG 69
Query: 57 MPTDSFESPLTLAACGGHVDLALLLIERGANIE-EVNDEGYTPLMEAAREGHEEMVCVLL 115
++ + ++ ++ N+ V++ G TPL + E+V L+
Sbjct: 70 GSSN--QQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV 127
Query: 116 QKGAKINAHTEETQETALTLACCG-------GFLDVADFLLKNGANIELGASTPLMEAAQ 168
+ G+ E+ L A F + D+L + T L
Sbjct: 128 KHGSNRLYGDNM-GESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIII 186
Query: 169 EGH 171
Sbjct: 187 TSG 189
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 74.1 bits (180), Expect = 4e-16
Identities = 49/202 (24%), Positives = 72/202 (35%), Gaps = 36/202 (17%)
Query: 12 LAACGGHVNMPTDSF-ESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAA 70
L A G +N D E+ L LAA D A L++ GA+ + + A
Sbjct: 8 LLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAAD 67
Query: 71 CGGHVDL-------------------------------ALLLIERGANIEEVNDEGYTPL 99
G + LI A+I ++ G T L
Sbjct: 68 AMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTAL 127
Query: 100 MEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA 159
AA + E V +LL A + ++ ET L LA G + + LL N AN E+
Sbjct: 128 HWAAAVNNTEAVNILLMHHANRD-AQDDKDETPLFLAAREGSYEASKALLDNFANREITD 186
Query: 160 S---TPLMEAAQEGHLELVRYL 178
P A++ H ++VR L
Sbjct: 187 HMDRLPRDVASERLHHDIVRLL 208
Score = 48.6 bits (114), Expect = 2e-07
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 80 LLIERGANIEEVNDE-GYTPLMEAAREGHEEMVCVL 114
L+ +GA + D+ G T L AAR + L
Sbjct: 7 DLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
Score = 45.2 bits (105), Expect = 3e-06
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 109 EMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148
+++ LL +GA++NA ++T ET+L LA D A L
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
Score = 42.5 bits (98), Expect = 2e-05
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 7/138 (5%)
Query: 44 LLIERGANIEEVNMPTDSF-ESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEA 102
L+ +GA +N D E+ L LAA D A L++ GA+ ++ G TPL A
Sbjct: 7 DLLAQGAE---LNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 103 AREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS-- 160
+ +LL+ A T L LA + + L+ A+I +
Sbjct: 64 VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123
Query: 161 -TPLMEAAQEGHLELVRY 177
T L AA + E V
Sbjct: 124 KTALHWAAAVNNTEAVNI 141
Score = 42.5 bits (98), Expect = 3e-05
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 4/39 (10%)
Query: 144 VADFLLKNGANIELGA----STPLMEAAQEGHLELVRYL 178
V LL GA + T L AA+ + + L
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 74.8 bits (182), Expect = 6e-16
Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 14/159 (8%)
Query: 35 CGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVD-----------LALLLIE 83
+ + ++ ++ + + L + A D A + +
Sbjct: 116 ANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD 175
Query: 84 RGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLD 143
A + +G T L AA+ + +V L+ + +E +T + LA G ++
Sbjct: 176 GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE 235
Query: 144 VADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLL 179
V +L++ GA++E + T A H +V
Sbjct: 236 VVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274
Score = 72.1 bits (175), Expect = 5e-15
Identities = 19/102 (18%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Query: 15 CGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGH 74
+ + L AA ++ + L+ + + + + ++P+ LAA G
Sbjct: 176 GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK--DKQDEDGKTPIMLAAQEGR 233
Query: 75 VDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQ 116
+++ + LI++GA++E V+ +T A H +V + +
Sbjct: 234 IEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275
Score = 70.1 bits (170), Expect = 2e-14
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 54 EVNMPTDSFESPLTLAACGGHVDLALLLIE-RGANIEEVNDEGYTPLMEAAREGHEEMVC 112
+ + L AA ++ + L+ +G+N ++ +++G TP+M AA+EG E+V
Sbjct: 179 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVM 238
Query: 113 VLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLK 150
L+Q+GA + A TA LA ++ D +
Sbjct: 239 YLIQQGASVEAVDAT-DHTARQLAQANNHHNIVDIFDR 275
Score = 65.1 bits (157), Expect = 1e-12
Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 14/140 (10%)
Query: 63 ESPLTLA-ACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLL------ 115
ESP+ L G + + NI + T L A E L+
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNIIDPRH-NRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 116 --QKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEG 170
GA +N + + T L LA + +L+K GA+ + + L +AA
Sbjct: 60 CIAAGADVN-AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANR 118
Query: 171 HLELVRYLLDSGAQEMQTKH 190
++ Y+L+S + +
Sbjct: 119 DFGMMVYMLNSTKLKGDIEE 138
Score = 55.5 bits (132), Expect = 2e-09
Identities = 48/245 (19%), Positives = 74/245 (30%), Gaps = 68/245 (27%)
Query: 7 ESPLTLA-ACGGH-----------VNMPTDSF-ESPLTLAACGGHVDLALLLIERGANIE 53
ESP+ L G VN+ + L A + + LI A
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60
Query: 54 -----EVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHE 108
+VN +PL LA L L++ GA+ N + L +AA
Sbjct: 61 IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120
Query: 109 EMVCVLLQKG-------------------AKINAHTEETQ-------------------- 129
M+ +L N ++
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180
Query: 130 -------ETALTLACCGGFLDVADFLLKNGANIELGAS----TPLMEAAQEGHLELVRYL 178
TAL A + + +L+ + + TP+M AAQEG +E+V YL
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240
Query: 179 LDSGA 183
+ GA
Sbjct: 241 IQQGA 245
Score = 53.2 bits (126), Expect = 1e-08
Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Query: 130 ETALTLAC-CGGFLDVADFLLKNGANI--ELGASTPLMEAAQEGHLELVRYLLDSGAQEM 186
E+ + L G + + + + NI T L A E L+ A+E
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60
Query: 187 QTKHIDI 193
D+
Sbjct: 61 IAAGADV 67
Score = 33.6 bits (75), Expect = 0.025
Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 13/60 (21%)
Query: 1 MPTDSFESPLTLAACGGH-------------VNMPTDSFESPLTLAACGGHVDLALLLIE 47
+ ++P+ LAA G V + + LA H ++ +
Sbjct: 216 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 74.0 bits (180), Expect = 1e-15
Identities = 52/250 (20%), Positives = 81/250 (32%), Gaps = 78/250 (31%)
Query: 28 SPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALL------- 80
+ A G + L L+ERGA+ +N + L A +VD+
Sbjct: 42 AVFLAACSSGDTEEVLRLLERGAD---INYANVDGLTALHQACIDDNVDMVKFLVENGAN 98
Query: 81 --------------------------LIERGANIEEVNDEGYTPLMEAAREGHEE----- 109
LI +GA++ VN EG TPL A E EE
Sbjct: 99 INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Query: 110 ---------------------MVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148
L G + ++ TAL +A G+ +V L
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218
Query: 149 LKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGA------QEMQT-------KHID 192
++ ++ + TPL AA G E R L+++ + QT +
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILG 278
Query: 193 ILEFKKRKQE 202
LE ++KQ
Sbjct: 279 YLEELQKKQN 288
Score = 73.2 bits (178), Expect = 2e-15
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Query: 12 LAACGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAAC 71
L + + S + L +AA G+ ++ LLI+ + VN+ +PL AA
Sbjct: 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD---VNIKDYDGWTPLHAAAH 241
Query: 72 GGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKIN 122
G + +L+E ++E VN G T A E+++ L + K N
Sbjct: 242 WGKEEACRILVENLCDMEAVNKVGQTAFDVAD----EDILGYLEELQKKQN 288
Score = 70.1 bits (170), Expect = 3e-14
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 55 VNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVL 114
S + L +AA G+ ++ LLI+ ++ + +G+TPL AA G EE +L
Sbjct: 192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251
Query: 115 LQKGAKINAHTEETQETALTLACCGGFLDVADFL--LKNGANI 155
++ + A + +TA +A D+ +L L+ N+
Sbjct: 252 VENLCDMEAVNKV-GQTAFDVAD----EDILGYLEELQKKQNL 289
Score = 56.3 bits (134), Expect = 1e-09
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 91 VNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADF 147
V + + A G E V LL++GA IN + TAL AC +D+ F
Sbjct: 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGL-TALHQACIDDNVDMVKF 91
Score = 46.3 bits (108), Expect = 3e-06
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 150 KNGANIELGASTPLMEAAQEGHLELVRYLLDSGA 183
+ ++ + A G E V LL+ GA
Sbjct: 31 RKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA 64
Score = 44.7 bits (104), Expect = 6e-06
Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 100 MEAAREGHEEMVCVLLQKGAKINAHTEETQE--------TALTLACCGGFLDVADFLLKN 151
M A++ E + + + + ++ AC G + LL+
Sbjct: 3 MADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER 62
Query: 152 GANIELGAS---TPLMEAAQEGHLELVRY 177
GA+I T L +A + ++++V++
Sbjct: 63 GADINYANVDGLTALHQACIDDNVDMVKF 91
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 69.1 bits (167), Expect = 3e-14
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 12 LAACGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAAC 71
L + S SPL A + + LL++ GAN+ N S S L A+
Sbjct: 130 LERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV---NAQMYSGSSALHSASG 186
Query: 72 GGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMV 111
G + L L+ GA+ N TPLM A +++
Sbjct: 187 RGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226
Score = 63.3 bits (152), Expect = 3e-12
Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 4/166 (2%)
Query: 15 CGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTD-SFESPLTLAACGG 73
G ++ LA L++ A + + L +A
Sbjct: 62 AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121
Query: 74 HVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETAL 133
+ LL+ERGA+I+ V+ + + A E + + LL + + +AL
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181
Query: 134 TLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVR 176
A G L + L+++GA+ L TPLM A ++++R
Sbjct: 182 HSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 57.5 bits (137), Expect = 3e-10
Identities = 43/198 (21%), Positives = 73/198 (36%), Gaps = 41/198 (20%)
Query: 27 ESPLTLAACGGHVDLALLLI----ERGANIEEVN-------------------------- 56
++PL +A G++ L+ + G ++ N
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63
Query: 57 ----MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVND----EGYTPLMEAAREGHE 108
++ LA L++ A + +G T L A +
Sbjct: 64 ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 123
Query: 109 EMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLME 165
E V +LL++GA I+A ++ + L A L + LL++GAN+ S+ L
Sbjct: 124 ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHS 183
Query: 166 AAQEGHLELVRYLLDSGA 183
A+ G L LVR L+ SGA
Sbjct: 184 ASGRGLLPLVRTLVRSGA 201
Score = 50.6 bits (119), Expect = 5e-08
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 93 DEGYTPLMEAAREGHEEMVCVLL----QKGAKINAHTEETQETALTLACC 138
++G TPL A +G+ V L+ Q G +++ + ++T L LA
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNL-RQTPLHLAVI 49
Score = 38.7 bits (88), Expect = 5e-04
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 161 TPLMEAAQEGHLELVRYLLDSGAQ 184
TPL A +G+L V L++ Q
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQ 28
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 66.5 bits (160), Expect = 2e-13
Identities = 41/221 (18%), Positives = 73/221 (33%), Gaps = 50/221 (22%)
Query: 27 ESPLTLAACGGHVDLALLLIER-GANIEEVNMPTDSFESPLTLAA--------------- 70
+S L LA L + +I + ++ +N + ++PL LA
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62
Query: 71 ------------------------CGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREG 106
G + + + ++ N G+T L A+ G
Sbjct: 63 CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG 122
Query: 107 HEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPL 163
+ +V +L+ GA +NA TAL LA D+ LLK GA++ +P
Sbjct: 123 YLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPY 182
Query: 164 MEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQEES 204
+ + L + +Q + + EES
Sbjct: 183 QLTWGRPSTRIQQQLGQLTLENLQ-------MLPESEDEES 216
Score = 62.2 bits (149), Expect = 6e-12
Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 18 HVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDL 77
+ + + L LA+ G++ + LL+ GA++ + + L LA + DL
Sbjct: 103 ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN--AQEPCNGRTALHLAVDLQNPDL 160
Query: 78 ALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQE 130
LL++ GA++ V +GY+P + L Q + E+++
Sbjct: 161 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESED 213
Score = 43.0 bits (99), Expect = 2e-05
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Query: 94 EGYTPLMEAAREGH----EEMVCVLLQKGAKINAHTEETQETALTLACC 138
+G + L A E++ + A +N Q+T L LA
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNL-QQTPLHLAVI 48
Score = 33.3 bits (74), Expect = 0.027
Identities = 11/48 (22%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Query: 15 CGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGA-NIEEVNMPTDS 61
CG VN T SP L + L + N++ + D
Sbjct: 167 CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDE 214
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 63.8 bits (154), Expect = 5e-13
Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 14/138 (10%)
Query: 69 AACGGHVDLALLLIERGANI------EEVNDEGYTPLMEAAR---EGHEEMVCVLLQKGA 119
A + L G ++ ++ T L A R +V L+Q
Sbjct: 13 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG 72
Query: 120 KINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVR 176
++ TAL C + LL+ A+IE+ TPL A + H
Sbjct: 73 NLD-KQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEE 131
Query: 177 YLLDSGAQEMQTK-HIDI 193
L + + + H++
Sbjct: 132 LLTQALSGRFNSHVHVEY 149
Score = 57.7 bits (138), Expect = 9e-11
Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 13/125 (10%)
Query: 10 LTLAACGGHVNMPTDSF------ESPLTLAA---CGGHVDLALLLIERGANIEEVNMPTD 60
L A G + E+ L LA + + L++ N+++
Sbjct: 23 LQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGS 82
Query: 61 SFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGA- 119
+ L + L + A+IE N+ G TPL A R HE +L Q +
Sbjct: 83 TALHYCCLTDNAECLKLL---LRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 139
Query: 120 KINAH 124
+ N+H
Sbjct: 140 RFNSH 144
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 61.6 bits (148), Expect = 2e-12
Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 34/159 (21%)
Query: 29 PLTL---AACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERG 85
PL L ++ G DL +I + ++P D + L A C GH ++ L++ G
Sbjct: 1 PLALLLDSSLEGEFDLVQRIIYEVDD---PSLPNDEGITALHNAVCAGHTEIVKFLVQFG 57
Query: 86 ANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVA 145
N+ + +G+TPL AA + ++ L++ GA + A T +TA
Sbjct: 58 VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAA------------ 105
Query: 146 DFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQ 184
E +EG+ + ++L +
Sbjct: 106 ----------------DKCEEMEEGYTQCSQFLYGVQEK 128
Score = 38.9 bits (89), Expect = 2e-04
Identities = 6/44 (13%), Positives = 13/44 (29%)
Query: 45 LIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANI 88
L+E GA + + + G+ + L +
Sbjct: 86 LVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 60.3 bits (144), Expect = 1e-11
Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 7/160 (4%)
Query: 26 FESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERG 85
+ + L AA G ++ L++ N+ + F G+ ++A L+ RG
Sbjct: 1 WGNELASAAARGDLEQLTSLLQNNVNVNA----QNGFGRTALQVMKLGNPEIARRLLLRG 56
Query: 86 ANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVA 145
AN + + G+ + +AAR G + + LL+ A +N E A G V
Sbjct: 57 ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 116
Query: 146 DFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSG 182
+ +N+ T A G E+V + +G
Sbjct: 117 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 42.6 bits (98), Expect = 1e-05
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 161 TPLMEAAQEGHLELVRYLLDSGA 183
L AA G LE + LL +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNV 25
Score = 36.4 bits (82), Expect = 0.002
Identities = 6/35 (17%), Positives = 12/35 (34%)
Query: 15 CGGHVNMPTDSFESPLTLAACGGHVDLALLLIERG 49
+V ++ LA G ++ L+ G
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 58.3 bits (139), Expect = 2e-10
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 65 PLTLAACGGHVD-LALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKG 118
PL A + LL + + + + + +G PL + E+ LL K
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57
Score = 56.0 bits (133), Expect = 1e-09
Identities = 38/228 (16%), Positives = 70/228 (30%), Gaps = 56/228 (24%)
Query: 9 PLTLAACGGH--------------VNMPTDSFESPLTLAACGGHVDLALLLIERGANI-- 52
PL A + PL + ++ L+ + N+
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 62
Query: 53 ---------------------------------EEVNMPTDSFESPLTLAACGGHVDLAL 79
++N T+ + L LA +++
Sbjct: 63 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122
Query: 80 LLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCG 139
LIE GA++ + PL AA G +++ +L G ++ T L A
Sbjct: 123 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 182
Query: 140 GFLDVADFLL-KNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGA 183
G D A L+ K GA +L + A E ++ ++ L++
Sbjct: 183 GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNNVV 227
Score = 53.3 bits (126), Expect = 6e-09
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Query: 1 MPTDSFESPLTLAACGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTD 60
+ FE L G V + + PL AA G + L LL G + VN
Sbjct: 113 VGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA--VNWQDK 170
Query: 61 SFESPLTLAACGGHVDLALLLIER-GANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGA 119
+PL A GH D A+LL+E+ GA + V+++G A +E++ L
Sbjct: 171 QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVV 227
Score = 49.8 bits (117), Expect = 1e-07
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 35 CGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGAN-IEEVND 93
+++ LIE GA++ + + PL AA G + L LL G + + +
Sbjct: 114 GKKWFEVSQFLIENGASVRIKDKFN---QIPLHRAASVGSLKLIELLCGLGKSAVNWQDK 170
Query: 94 EGYTPLMEAAREGHEEMVCVLLQK-GAKINAHTEETQETALTLACCGGFLDVADFLLKNG 152
+G+TPL A EGH + +L++K GA+ + + A +A V F L N
Sbjct: 171 QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNK-GAKAEDVALN---EQVKKFFLNNV 226
Query: 153 AN 154
+
Sbjct: 227 VD 228
Score = 47.5 bits (111), Expect = 6e-07
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 97 TPLMEAAREGHEEMVCVLL-QKGAKINAHTEETQETALTLACCGGFLDVADFLLKNG 152
PL +A E V LL K + + ++ L + ++ FLL
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQD-GRIPLHWSVSFQAHEITSFLLSKM 57
Score = 40.6 bits (93), Expect = 1e-04
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 161 TPLMEAAQEGHLELVRYLLDSGAQEMQTKHID 192
PL +A E V+ LL S + K D
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQD 33
Score = 39.8 bits (91), Expect = 2e-04
Identities = 10/64 (15%), Positives = 16/64 (25%), Gaps = 4/64 (6%)
Query: 131 TALTLACCGGFLDVADFLLK-NGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQEM 186
L AC LL + + PL + E+ +LL
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 187 QTKH 190
+
Sbjct: 62 LDDY 65
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 55.6 bits (132), Expect = 4e-10
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 29 PLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANI 88
L AA G D +L+ GA + SPL LAA GH +L+ G +
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFTTDWL----GTSPLHLAAQYGHFSTTEVLLRAGVSR 60
Query: 89 EEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148
+ TPL AA EGH +V VLL+ GA +N + + TAL A +V + L
Sbjct: 61 DARTKVDRTPLHMAASEGHANIVEVLLKHGADVN-AKDMLKMTALHWATEHNHQEVVELL 119
Query: 149 LKNGANIELGAS---TPLMEAAQEGHLELVRYL 178
+K GA++ + T + G+ +L L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 48.3 bits (113), Expect = 1e-07
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 97 TPLMEAAREGHEEMVCVLLQKGAKINAH 124
L+EAAR G ++ V +L+ GA
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTD 31
Score = 47.5 bits (111), Expect = 3e-07
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 156 ELGASTPLMEAAQEGHLELVRYLLDSGA 183
+LG L+EAA+ G + VR L+ +GA
Sbjct: 1 DLG--KKLLEAARAGQDDEVRILMANGA 26
Score = 32.1 bits (71), Expect = 0.049
Identities = 8/25 (32%), Positives = 9/25 (36%)
Query: 131 TALTLACCGGFLDVADFLLKNGANI 155
L A G D L+ NGA
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPF 28
Score = 30.6 bits (67), Expect = 0.17
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 15 CGGHVNMPTDSFESPLTLAACGGHVDLALLL 45
G V+ + ++ ++ G+ DLA +L
Sbjct: 122 YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 48.8 bits (114), Expect = 5e-08
Identities = 22/124 (17%), Positives = 37/124 (29%), Gaps = 2/124 (1%)
Query: 60 DSFESPLTLAACGGHVDLALLLIERGA--NIEEVNDEGYTPLMEAAREGHEEMVCVLLQK 117
+ L AA G V+ L+E GA N +M E++ + +
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 118 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRY 177
+ T L V + P+ A + GH ++ RY
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120
Query: 178 LLDS 181
L +
Sbjct: 121 LRAA 124
Score = 40.3 bits (92), Expect = 5e-05
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 159 ASTPLMEAAQEGHLELVRYLLDSGAQEMQTKH 190
++ L AA G +E VR LL++GA
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNS 34
Score = 39.9 bits (91), Expect = 7e-05
Identities = 25/126 (19%), Positives = 39/126 (30%), Gaps = 4/126 (3%)
Query: 24 DSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIE 83
+ L AA G V+ L+E GAN N + + + L+
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAEL----LLL 56
Query: 84 RGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLD 143
GA + T + A V+L + + + LA G D
Sbjct: 57 HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD 116
Query: 144 VADFLL 149
VA +L
Sbjct: 117 VARYLR 122
Score = 28.8 bits (62), Expect = 0.46
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 15 CGGHVNMPTDSFESPLTLAACGGHVDLALLLIE 47
G +++ P+ LA GH D+A L
Sbjct: 91 AGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123
Score = 28.0 bits (60), Expect = 0.88
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 56 NMPTDSFESPLTLAACGGHVDLALLLIE 83
++ P+ LA GH D+A L
Sbjct: 96 DVRDAWGRLPVDLAEELGHRDVARYLRA 123
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 48.3 bits (113), Expect = 1e-07
Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 34/150 (22%)
Query: 65 PLTLAACGGHVD-LALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQ------- 116
L+ AA G V + LL + + +N G T L + +L Q
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64
Query: 117 ----KGAKINAHTEETQETALTLACCGGFLDVADF-------------------LLKNGA 153
+A +T L G ++V D L +
Sbjct: 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 124
Query: 154 NIELGAS---TPLMEAAQEGHLELVRYLLD 180
++ + TPL A Q G +LV L
Sbjct: 125 DLHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 37.9 bits (86), Expect = 6e-04
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 159 ASTPLMEAAQEGHLELVRYLLDSG 182
A L AA G ++ VR LL
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRE 25
Score = 35.9 bits (81), Expect = 0.003
Identities = 8/34 (23%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 95 GYTPLMEAAREGHEEMVCVLLQK-GAKINAHTEE 127
L AA G + V LL + +A
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRF 35
Score = 32.9 bits (73), Expect = 0.024
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 15 CGGHVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGH 74
G VN+P + P+ LA GH + L +++ +PL LA G
Sbjct: 90 HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES----DLHRRDARGLTPLELALQRGA 145
Query: 75 VDLALLLIE 83
DL +L
Sbjct: 146 QDLVDILQG 154
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 41.8 bits (96), Expect = 1e-05
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 161 TPLMEAAQEGHLELVRYLLDSGAQEMQTKH 190
M A + G L+ V+ + G +T
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLE 33
Score = 37.2 bits (84), Expect = 6e-04
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 97 TPLMEAAREGHEEMVCVLLQK 117
M A + G + V + K
Sbjct: 4 KEFMWALKNGDLDEVKDYVAK 24
Score = 34.9 bits (78), Expect = 0.003
Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 2/116 (1%)
Query: 63 ESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKIN 122
+ A G +D + +G ++ + G PL AA G E++ LL KGA IN
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 123 AHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS--TPLMEAAQEGHLELVR 176
A + L+ G V L K G T L + L++
Sbjct: 63 APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118
Score = 32.6 bits (72), Expect = 0.019
Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 34/120 (28%)
Query: 27 ESPLTLAACGGHVDLALLLIER------------------------------GANIEEVN 56
+ A G +D + + ++N
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 57 MPTDSFESPLTLAACGGHVDLALLLIERGANIEEVNDEGYTPLMEAAREGHEEMVCVLLQ 116
P +PL A GHV LL+ +GA+ +G T L + + LLQ
Sbjct: 63 APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKA----LLQ 118
>d1aym1_ b.121.4.1 (1:) Rhinovirus coat proteins {Human rhinovirus
16, (HRV-16) [TaxId: 31708]}
Length = 285
Score = 31.0 bits (70), Expect = 0.16
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 10/67 (14%)
Query: 262 VNVATDSTLSHVTSTPSTSAATTTQTTSPPVVSAASQNTSSATQSSTAATQNASPATQSS 321
V D L+ V P+ + + T + + PV+ AA T T P
Sbjct: 3 VERYVDEVLNEVLVVPNINQSHPTTSNAAPVLDAA----------ETGHTNKIQPEDTIE 52
Query: 322 NVATQNT 328
Q++
Sbjct: 53 TRYVQSS 59
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI,
C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Length = 218
Score = 30.7 bits (68), Expect = 0.20
Identities = 27/187 (14%), Positives = 50/187 (26%), Gaps = 15/187 (8%)
Query: 32 LAACGGHVD---LALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANI 88
+ G +D A L ++RG ++E V+ + F S +R
Sbjct: 8 MVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLH 67
Query: 89 EEVNDEGYTPLMEAAREGHEEMVCVLLQKGAKINAHTEETQETALTLACCGGFLDVADFL 148
E + + + V + E T G VA
Sbjct: 68 LVPFTEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNALAITTGESLG---QVASQT 124
Query: 149 LKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQEMQTKHIDILEFKKRKQEESKAAF 208
L + I + P++ + + + I + R E+ F
Sbjct: 125 LDSMHTINEVTNYPVIRPLITMDKLEIIKIA---------EEIGTYDISIRPYEDCCTVF 175
Query: 209 CRGSEST 215
S +T
Sbjct: 176 TPASPAT 182
>d1r1a1_ b.121.4.1 (1:) Rhinovirus coat proteins {Human rhinovirus A
1A (HRV-1A) [TaxId: 12134]}
Length = 283
Score = 28.3 bits (63), Expect = 1.3
Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 10/62 (16%)
Query: 267 DSTLSHVTSTPSTSAATTTQTTSPPVVSAASQNTSSATQSSTAATQNASPATQSSNVATQ 326
D L+ V P+ + T + S P++ AA T T N P
Sbjct: 4 DEVLNEVLVVPNIKESHHTTSNSAPLLDAA----------ETGHTSNVQPEDAIETRYVI 53
Query: 327 NT 328
+
Sbjct: 54 TS 55
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase
(Pantoate-beta-alanine ligase, PanC) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 286
Score = 27.9 bits (61), Expect = 1.7
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 143 DVADFLLKNGANIELGASTPLMEAAQEGHLELVR 176
DV+ L G + L P M A EGHL LVR
Sbjct: 20 DVSRALRLTGRRVML---VPTMGALHEGHLALVR 50
>d1p9ha_ b.81.3.1 (A:) Adhesin YadA, collagen-binding domain
{Yersinia enterocolitica [TaxId: 630]}
Length = 189
Score = 27.5 bits (60), Expect = 1.7
Identities = 10/69 (14%), Positives = 22/69 (31%)
Query: 278 STSAATTTQTTSPPVVSAASQNTSSATQSSTAATQNASPATQSSNVATQNTPVTNLNNAV 337
+ + + + A + +A S A ++ A + V ++
Sbjct: 4 TAVQISPNADPALGLEYPVRPPVPGAGGLNASAKGIHSIAIGATAEAAKGAAVAVGAGSI 63
Query: 338 ATLKTAVAT 346
AT +VA
Sbjct: 64 ATGVNSVAI 72
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase
(Pantoate-beta-alanine ligase, PanC) {Escherichia coli
[TaxId: 562]}
Length = 282
Score = 27.9 bits (61), Expect = 2.0
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 162 PLMEAAQEGHLELVR 176
P M +GH++LV
Sbjct: 28 PTMGNLHDGHMKLVD 42
>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus
anthracis, Dlp-2 [TaxId: 1392]}
Length = 146
Score = 26.2 bits (57), Expect = 3.7
Identities = 14/80 (17%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Query: 32 LAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEV 91
+ A G + +++ E + E TL + L L E E
Sbjct: 61 ILALEGKPLATMKEYLATSSVNEGTSKESAEEMVQTLVN--DYSALIQELKEGMEVAGEA 118
Query: 92 NDEGYTPLMEAAREGHEEMV 111
D ++ A E+ V
Sbjct: 119 GDATSADMLLAIHTTLEQHV 138
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase
(Pantoate-beta-alanine ligase, PanC) {Thermus
thermophilus [TaxId: 274]}
Length = 276
Score = 26.7 bits (58), Expect = 4.8
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 162 PLMEAAQEGHLELVR 176
P M GHL LV
Sbjct: 23 PTMGYLHRGHLALVE 37
>d1ev11_ b.121.4.1 (1:) Human enterovirus B coat proteins {Human
echovirus 1 [TaxId: 46633]}
Length = 281
Score = 25.6 bits (56), Expect = 9.5
Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 18/74 (24%)
Query: 255 GDDQSSVVNVATDSTLSHVTSTPSTSAATTTQTTSPPVVSAASQNTSSATQSSTAATQNA 314
GD Q++V + T + T + P ++A T T A
Sbjct: 1 GDVQNAVEGA--------MVRVADTVQTSATNSERVPNLTAV----------ETGHTSQA 42
Query: 315 SPATQSSNVATQNT 328
P N
Sbjct: 43 VPGDTMQTRHVINN 56
>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria
innocua [TaxId: 1642]}
Length = 150
Score = 25.0 bits (54), Expect = 9.8
Identities = 13/80 (16%), Positives = 25/80 (31%)
Query: 32 LAACGGHVDLALLLIERGANIEEVNMPTDSFESPLTLAACGGHVDLALLLIERGANIEEV 91
L A GG L A++EE L G L + ++
Sbjct: 58 LLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQGIELTDKE 117
Query: 92 NDEGYTPLMEAAREGHEEMV 111
D+ ++ A + ++ +
Sbjct: 118 GDDVTNDMLIAFKASIDKHI 137
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.308 0.122 0.340
Gapped
Lambda K H
0.267 0.0395 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,100,083
Number of extensions: 46727
Number of successful extensions: 435
Number of sequences better than 10.0: 1
Number of HSP's gapped: 265
Number of HSP's successfully gapped: 148
Length of query: 352
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 266
Effective length of database: 1,226,816
Effective search space: 326333056
Effective search space used: 326333056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 53 (25.1 bits)