Query psy5492
Match_columns 361
No_of_seqs 211 out of 666
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 18:53:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5492.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5492hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m3w_A Pacsin3, protein kinase 100.0 5.2E-57 1.8E-61 439.5 25.1 262 33-357 5-304 (320)
2 3abh_A Pacsin2, protein kinase 100.0 4.4E-56 1.5E-60 429.0 26.7 270 23-355 3-311 (312)
3 3aco_A Pacsin2, protein kinase 100.0 1.4E-54 4.6E-59 425.8 28.5 272 23-357 3-313 (350)
4 3i2w_A Syndapin, LD46328P; EFC 100.0 8.5E-54 2.9E-58 409.1 24.5 252 41-355 1-289 (290)
5 3haj_A Human pacsin2 F-BAR; pa 100.0 8.1E-53 2.8E-57 430.8 29.5 267 28-357 1-306 (486)
6 2x3v_A Syndapin I, protein kin 100.0 4.9E-52 1.7E-56 404.7 30.7 266 28-357 1-304 (337)
7 2efk_A CDC42-interacting prote 100.0 1.4E-43 4.8E-48 338.3 28.3 252 41-358 2-288 (301)
8 2v0o_A FCHO2, FCH domain only 100.0 1.1E-43 3.8E-48 335.1 27.1 239 38-355 6-275 (276)
9 2efl_A Formin-binding protein 100.0 5.4E-43 1.8E-47 334.1 29.5 255 38-358 6-295 (305)
10 4dyl_A Tyrosine-protein kinase 100.0 3.9E-42 1.3E-46 344.8 25.4 249 39-356 3-285 (406)
11 3g9g_A Suppressor of yeast pro 99.9 9.4E-23 3.2E-27 195.6 14.7 178 48-341 43-267 (287)
12 3qwe_A GMIP, GEM-interacting p 99.7 2.3E-15 8E-20 143.5 26.6 200 47-246 13-243 (279)
13 4dyl_A Tyrosine-protein kinase 94.0 1.1 3.8E-05 44.1 15.1 38 261-298 249-290 (406)
14 2ykt_A Brain-specific angiogen 89.2 14 0.00047 34.2 15.5 45 199-243 167-211 (253)
15 2fic_A Bridging integrator 1; 84.6 22 0.00075 31.9 20.8 49 180-242 179-227 (251)
16 1uru_A Amphiphysin; endocytosi 84.4 21 0.00073 31.6 16.4 46 184-243 170-215 (244)
17 1i4d_A Arfaptin 2, partner of 76.6 44 0.0015 30.3 22.6 158 55-243 21-188 (224)
18 2q13_A DCC-interacting protein 64.4 1E+02 0.0034 29.4 22.2 68 137-205 123-190 (385)
19 4e61_A Protein BIM1; EB1-like 64.2 55 0.0019 26.4 10.4 34 193-226 27-60 (106)
20 3iox_A AGI/II, PA; alpha helix 62.2 1.4E+02 0.0047 30.3 15.5 27 127-153 12-38 (497)
21 2q12_A DIP13 alpha, DCC-intera 61.7 92 0.0031 28.0 22.4 42 49-90 29-70 (265)
22 3haj_A Human pacsin2 F-BAR; pa 61.4 1.3E+02 0.0045 29.8 16.0 75 124-205 150-231 (486)
23 2z0v_A SH3-containing GRB2-lik 60.0 96 0.0033 27.7 22.4 26 48-73 15-40 (240)
24 3mtu_A Tropomyosin alpha-1 cha 58.2 33 0.0011 25.7 6.8 42 187-228 12-53 (75)
25 2d1l_A Metastasis suppressor p 51.5 1.5E+02 0.0051 27.3 20.3 51 196-246 169-220 (253)
26 2v66_B Nuclear distribution pr 50.9 98 0.0034 25.1 13.3 76 130-226 9-84 (111)
27 2b9c_A Striated-muscle alpha t 46.6 1.3E+02 0.0045 25.3 11.1 98 121-225 7-107 (147)
28 3ghg_A Fibrinogen alpha chain; 44.5 1.5E+02 0.0053 30.2 11.0 20 313-332 173-192 (562)
29 4h8s_A DCC-interacting protein 43.3 2.3E+02 0.0077 27.1 23.0 67 137-204 146-212 (407)
30 2l0l_A Oxidoreductase THAT cat 38.4 6.3 0.00022 24.0 -0.1 18 293-310 1-18 (27)
31 3vkg_A Dynein heavy chain, cyt 37.0 5.1E+02 0.018 32.4 15.7 142 120-267 1930-2081(3245)
32 3ok8_A Brain-specific angiogen 36.8 2.4E+02 0.0082 25.5 22.5 171 49-243 24-200 (222)
33 3tq7_B Microtubule-associated 34.6 51 0.0017 25.3 4.5 42 194-235 11-52 (82)
34 3qwm_A Iqsec1, IQ motif and SE 32.9 38 0.0013 28.6 3.9 24 207-230 110-133 (140)
35 1zww_A SH3-containing GRB2-lik 32.0 2.8E+02 0.0095 24.8 20.9 24 136-159 150-173 (256)
36 3iox_A AGI/II, PA; alpha helix 30.9 4.3E+02 0.015 26.7 14.7 89 129-229 7-97 (497)
37 2fic_A Bridging integrator 1; 29.7 2.9E+02 0.0099 24.3 14.3 75 132-213 145-219 (251)
38 4dk0_A Putative MACA; alpha-ha 28.7 3.3E+02 0.011 25.1 10.3 67 122-192 68-134 (369)
39 3aco_A Pacsin2, protein kinase 28.7 3.6E+02 0.012 25.0 12.3 79 120-205 153-238 (350)
40 3csx_A Putative uncharacterize 26.9 2E+02 0.0068 22.0 6.6 60 170-229 12-71 (81)
41 2dfs_A Myosin-5A; myosin-V, in 26.5 6.4E+02 0.022 27.8 13.3 34 173-206 977-1010(1080)
42 2v71_A Nuclear distribution pr 24.5 3.6E+02 0.012 23.7 14.1 34 192-225 103-136 (189)
43 2cly_C ATP synthase coupling f 24.1 86 0.0029 23.8 4.0 32 63-94 12-53 (77)
44 3fpp_A Macrolide-specific effl 22.5 4.4E+02 0.015 23.9 10.9 67 123-193 68-134 (341)
45 3i2w_A Syndapin, LD46328P; EFC 21.6 4.3E+02 0.015 23.6 13.3 33 173-205 184-216 (290)
46 3fx7_A Putative uncharacterize 21.6 1.7E+02 0.0057 23.0 5.4 34 49-82 53-87 (94)
47 4etr_A Putative uncharacterize 20.5 55 0.0019 27.3 2.7 52 42-98 22-73 (153)
48 3u59_A Tropomyosin beta chain; 20.4 3E+02 0.01 21.2 13.2 54 173-226 44-100 (101)
No 1
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=100.00 E-value=5.2e-57 Score=439.47 Aligned_cols=262 Identities=44% Similarity=0.812 Sum_probs=222.8
Q ss_pred CcchhhccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH----Hhhhh-hhHhHH
Q psy5492 33 DENMLIASSDSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELI----EKVMR-TCWQKD 107 (361)
Q Consensus 33 ~~~~~~~f~~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~----e~g~l-~aWq~~ 107 (361)
++.++..+++||||++||++|++|+++|+++|++|.+||+|||.||++||++|.+||++|.+.. +.|++ .+|...
T Consensus 5 ~~~~~~~~~~~FW~~~g~~~l~~~~~~g~~~~~el~~f~keRa~iE~~Yak~L~kLakk~~~~~~~~~e~gsl~~aw~~i 84 (320)
T 3m3w_A 5 EDAGGEVLGGSFWEAGNYRRTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLADWARKWRGAVEKGPQYGTLEKAWHAF 84 (320)
T ss_dssp ---------CCTTSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred cCCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCChHHHHHHHH
Confidence 3445678999999999999999999999999999999999999999999999999999986543 23454 455422
Q ss_pred --------HHH------------------------HHhhh-hhHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 108 --------TYH------------------------KTVLH-IKERKEMEDAFKKAQKPWCKLLTKVNKTKNDYHVACKAE 154 (361)
Q Consensus 108 --------~~H------------------------~qL~~-~KE~K~~e~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee 154 (361)
..| ++|++ +|++|+++.+|.++|++|...++.|+|+|++|+.+|+++
T Consensus 85 ~~e~e~~a~~H~~~a~~l~~~v~~~l~~~~k~~~~k~~~~~~ke~K~~~~~~~k~qk~~~~~~~~l~kaKk~Y~~~c~e~ 164 (320)
T 3m3w_A 85 FTAAERLSELHLEVREKLHGPDSERVRTWQRGAFHRPVLGGFRASRAAEDGFRKAQKPWLKRLKEVEASKKSYHTARKDE 164 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233 34433 677899999999999999999999999999999999999
Q ss_pred HHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 155 RSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKD 234 (361)
Q Consensus 155 ~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~ 234 (361)
++++.++..+++++++++++++|++.++.++.+++++++++|..+|..+|.+++.|+++||.+|+.||+||++||.|||+
T Consensus 165 ~~a~~~~~~~~~d~~~s~ke~~K~~~k~~k~~~~~~~a~~~Y~~~l~~~n~~~~~y~~~~~~~~~~~Q~lEe~Ri~~lk~ 244 (320)
T 3m3w_A 165 KTAQTRESHAKADSSMSQEQLRKLQERVGRCTKEAEKMKTQYEQTLAELNRYTPRYMEDMEQAFESCQAAERQRLLFFKD 244 (320)
T ss_dssp HHHHHHTTSCCSSCCC---CCSSSSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887777777788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHHHHHHhhcCCCh
Q psy5492 235 SLFSIHKCLNISQDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKLICILKCCYSRL 314 (361)
Q Consensus 235 ~L~~y~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (361)
+||.|++++++...+ .+
T Consensus 245 ~l~~~~~~~~~~~~~---------------------------------------------------------------~~ 261 (320)
T 3m3w_A 245 VLLTLHQHLDLSSSD---------------------------------------------------------------KF 261 (320)
T ss_dssp HHHHHHHHHCGGGCH---------------------------------------------------------------HH
T ss_pred HHHHHHHHHccccch---------------------------------------------------------------hH
Confidence 999999999776433 78
Q ss_pred hhHHHHHHHHHhhCChHhHHHHHHhcCCCCCCCCCcchhhccc
Q psy5492 315 PQIYEEFYHTINNADHEKDLKWWSNNHGVNMAMNWPQFEVRLS 357 (361)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~dl~~~~~~~g~~~~~~~p~f~~~~~ 357 (361)
+++|++|+++|++||+++||++|++++||||+|+||+||+|..
T Consensus 262 ~~~~e~~~~~i~~id~~~Di~~fi~~~gtG~~p~~p~Fe~y~~ 304 (320)
T 3m3w_A 262 HELHRDLQQSIEAASDEEDLRWWRSTHGPGMAMNWPQFEEWSL 304 (320)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHSTTSCCCCCCCCC---
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 9999999999999999999999999999999999999999854
No 2
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=100.00 E-value=4.4e-56 Score=428.99 Aligned_cols=270 Identities=47% Similarity=0.812 Sum_probs=227.4
Q ss_pred cccCCCCCCCCcchh-hccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH----H
Q psy5492 23 AVLGGMSHHSDENML-IASSDSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELI----E 97 (361)
Q Consensus 23 ~~~~~m~~~~~~~~~-~~f~~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~----e 97 (361)
+++++|||++++++. ..|+++|||++||++|++|+++|+++|++|.+||+|||.||++||++|.+||+++.+.. +
T Consensus 3 ~~~~~~~~~~~~~~~~~~f~~~FW~~~g~~~l~~r~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~e 82 (312)
T 3abh_A 3 SGSSGMSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQ 82 (312)
T ss_dssp --------------------CCTTSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCCCCCcccccccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 478899999887764 89999999999999999999999999999999999999999999999999999997643 3
Q ss_pred hhhh-hhHhHH--------HHHHHhhh-------------------------hhHHhHHHHHHHHHhhHHHHHHHHHHHH
Q psy5492 98 KVMR-TCWQKD--------TYHKTVLH-------------------------IKERKEMEDAFKKAQKPWCKLLTKVNKT 143 (361)
Q Consensus 98 ~g~l-~aWq~~--------~~H~qL~~-------------------------~KE~K~~e~~~~KaqK~~~~~~~kl~Ka 143 (361)
.|++ .+|... ..|.+++. +|++|++++.+.+++++|.+.++.++|+
T Consensus 83 ~gtl~~aw~~i~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~~~~~k~~~~~~ke~k~~~~~~~k~~k~~~~~~~~l~Ka 162 (312)
T 3abh_A 83 YGTVEKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAA 162 (312)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCBCTTSSBHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555 666532 46654432 3555889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q psy5492 144 KNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQE 223 (361)
Q Consensus 144 KK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~ 223 (361)
|++|+.+|++.+.++.+...+.+|+++++++++|++.++.++..++.+|+++|..+|..+|.++++|+++||.+|+.||+
T Consensus 163 K~~Y~~~c~e~e~a~~~~~~~~~d~~~~~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~Q~ 242 (312)
T 3abh_A 163 KKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQQ 242 (312)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHTCTTCCSHHHHGGGTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999998877666655666778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHH
Q psy5492 224 METTRLQFFKDSLFSIHKCLNISQDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKL 303 (361)
Q Consensus 224 lEe~RI~flK~~L~~y~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 303 (361)
+|++||.+||++|+.|++++++++.+
T Consensus 243 lee~Rl~~lk~~l~~~~~~~~~~~~~------------------------------------------------------ 268 (312)
T 3abh_A 243 FEEKRLRFFREVLLEVQKHLDLSNVA------------------------------------------------------ 268 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGST------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc------------------------------------------------------
Confidence 99999999999999999999776544
Q ss_pred HHHHhhcCCChhhHHHHHHHHHhhCChHhHHHHHHhcCCCCCCCCCcchhhc
Q psy5492 304 ICILKCCYSRLPQIYEEFYHTINNADHEKDLKWWSNNHGVNMAMNWPQFEVR 355 (361)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~g~~~~~~~p~f~~~ 355 (361)
.+.++|++|+++|++||++.||.+|++++|||++|+||+||+|
T Consensus 269 ---------~~~~~~~~l~~~i~~id~~~Di~~fi~~~~tg~~p~~~~Fe~y 311 (312)
T 3abh_A 269 ---------GYKAIYHDLEQSIRAADAVEDLRWFRANHGPGMAMNWPQFEEW 311 (312)
T ss_dssp ---------THHHHHHHHHHHHHTCCHHHHHHHHHHHHSTTSCCCCCCCCC-
T ss_pred ---------hHHHHHHHHHHHHHhCChHHHHHHHHHHhCCCCCCCCCCCCCC
Confidence 8899999999999999999999999999999999999999987
No 3
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-54 Score=425.78 Aligned_cols=272 Identities=47% Similarity=0.805 Sum_probs=224.1
Q ss_pred cccCCCCCCCCcchh-hccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH----H
Q psy5492 23 AVLGGMSHHSDENML-IASSDSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELI----E 97 (361)
Q Consensus 23 ~~~~~m~~~~~~~~~-~~f~~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~----e 97 (361)
+++++|||++++++. ..|+++|||++||++|++|+++|+++|+||.+||+|||+||++||++|.+|+++|.+.. +
T Consensus 3 ~~~~~m~~~~~~~~~~~~f~~~FW~~~g~~~L~~r~~~g~~~~~el~~f~keRa~IE~eYak~L~kLakk~~~~~~~~~e 82 (350)
T 3aco_A 3 SGSSGMSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQ 82 (350)
T ss_dssp --------------------CCTTSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC
T ss_pred CCCCCCCCCcccccccccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 478899999887764 89999999999999999999999999999999999999999999999999999998643 3
Q ss_pred hhhh-hhHhHH--------HHHHHhhh-------------------------hhHHhHHHHHHHHHhhHHHHHHHHHHHH
Q psy5492 98 KVMR-TCWQKD--------TYHKTVLH-------------------------IKERKEMEDAFKKAQKPWCKLLTKVNKT 143 (361)
Q Consensus 98 ~g~l-~aWq~~--------~~H~qL~~-------------------------~KE~K~~e~~~~KaqK~~~~~~~kl~Ka 143 (361)
.|++ .+|... ..|.+++. +|++|++++.+.+++++|.+.++.|+|+
T Consensus 83 ~gtl~~aw~~l~~e~e~~a~~H~~la~~L~~~v~~~l~~~~~e~~~k~~~~~~ke~K~~~~~~~k~~k~~~~~~~~l~Ka 162 (350)
T 3aco_A 83 YGTVEKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAA 162 (350)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTSCBCTTSSBHHHHHHHHHHHHHTSHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555 667532 45654432 3555889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q psy5492 144 KNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQE 223 (361)
Q Consensus 144 KK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~ 223 (361)
|++|+.+|++.+.++.....+.+++++++++++|++.++.++..++.+|+++|..+|..+|.++.+|+++|+.+|+.||+
T Consensus 163 Kk~Y~~~c~e~e~a~~~~~~~~~d~~~~~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~Q~ 242 (350)
T 3aco_A 163 KKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQQ 242 (350)
T ss_dssp TTTHHHHHHHHHHHHHHHTTSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998887766666667778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHH
Q psy5492 224 METTRLQFFKDSLFSIHKCLNISQDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKL 303 (361)
Q Consensus 224 lEe~RI~flK~~L~~y~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 303 (361)
+|++||.+||++|+.|++++++++.+
T Consensus 243 lee~Rl~~lk~~l~~~~~~l~~~~~~------------------------------------------------------ 268 (350)
T 3aco_A 243 FEEKRLRFFREVLLEVQKHLDLSNVA------------------------------------------------------ 268 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSTTCH------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccch------------------------------------------------------
Confidence 99999999999999999999777654
Q ss_pred HHHHhhcCCChhhHHHHHHHHHhhCChHhHHHHHHhcCCCCCCCCCcchhhccc
Q psy5492 304 ICILKCCYSRLPQIYEEFYHTINNADHEKDLKWWSNNHGVNMAMNWPQFEVRLS 357 (361)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~g~~~~~~~p~f~~~~~ 357 (361)
.+.++|++|+++|++||++.||.+|+++||||++|+||+||+|..
T Consensus 269 ---------~~~~~~~~l~~~i~~id~~~Di~~fi~~~~tg~~p~~~~Fe~y~~ 313 (350)
T 3aco_A 269 ---------GYKAIYHDLEQSIRAADAVEDLRWFRANHGPGMAMNWPQFEEWSA 313 (350)
T ss_dssp ---------HHHHHHHHHHHHHHTCCHHHHHHHHHHHTSTTSCCCCC-------
T ss_pred ---------hHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCCCCcccCCc
Confidence 688999999999999999999999999999999999999999854
No 4
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=100.00 E-value=8.5e-54 Score=409.10 Aligned_cols=252 Identities=69% Similarity=1.133 Sum_probs=212.2
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH----Hhhhh-hhHhHH--------
Q psy5492 41 SDSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELI----EKVMR-TCWQKD-------- 107 (361)
Q Consensus 41 ~~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~----e~g~l-~aWq~~-------- 107 (361)
++||||++||++|++|+++|+++|++|.+||+|||.||++||++|.+|++++.+.+ +.|++ .+|...
T Consensus 1 ~~~FW~~~g~~~l~~r~~~g~~~~~el~~f~keRa~iE~~Yak~L~kL~~~~~~~~~~~~~~gs~~~aw~~~~~~~e~~a 80 (290)
T 3i2w_A 1 SDSFWEPGNYKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKGPEYGTTEAAWKGVLTESERIS 80 (290)
T ss_dssp CCCTTSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999986533 33555 667533
Q ss_pred HHHHHhhh------------------------hhHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhh
Q psy5492 108 TYHKTVLH------------------------IKERKEMEDAFKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERN 163 (361)
Q Consensus 108 ~~H~qL~~------------------------~KE~K~~e~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~ 163 (361)
..|.+++. +|++|.+++++.++++++.+.++.++|||+.|+.+|++++.++.+...
T Consensus 81 ~~h~~~a~~l~~~v~~~l~~~~~e~~~k~~~~~kerK~~~~~~~k~~k~~~~~~~~l~kaKk~Y~~~c~e~~~a~~~~~~ 160 (290)
T 3i2w_A 81 DVHMKIKDNLCNDVNSQIKTWQKENYHHTLMQIKERKDLEDLFKKAQKPWAKLLAKVEKAKADYHSACKTERSATNQERN 160 (290)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHCCEETTEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46665432 255688889999999999999999999999999999998877766665
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5492 164 ASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCL 243 (361)
Q Consensus 164 a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~l 243 (361)
+.+++++++++++|++.+++++..++.+|+++|..+|..+|..++.|+++||.+|+.||++|++||.+||++|+.|++++
T Consensus 161 a~~~~~~s~k~~~K~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~p~~~~~~Q~lee~Ri~~lk~~l~~~~~~~ 240 (290)
T 3i2w_A 161 ANADSSLSPDQVKKMHDRVQKTKDQVQKCREKYEQAIAEITKYNSVYIEDMTSVFEKCQTFEKTRLQFFKEILFNVHSCL 240 (290)
T ss_dssp ---------------CTTSSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHHHHHHhhcCCChhhHHHHHHH
Q psy5492 244 NISQDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKLICILKCCYSRLPQIYEEFYH 323 (361)
Q Consensus 244 d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
++++.+ .+.++|++|++
T Consensus 241 ~~~~~~---------------------------------------------------------------~~~~~~~~~~~ 257 (290)
T 3i2w_A 241 DLTKVQ---------------------------------------------------------------SLPQIYEEFSH 257 (290)
T ss_dssp CGGGCT---------------------------------------------------------------THHHHHHHHHH
T ss_pred ccccch---------------------------------------------------------------hHHHHHHHHHH
Confidence 877655 78999999999
Q ss_pred HHhhCChHhHHHHHHhcCCCCCCCCCcchhhc
Q psy5492 324 TINNADHEKDLKWWSNNHGVNMAMNWPQFEVR 355 (361)
Q Consensus 324 ~~~~~~~~~dl~~~~~~~g~~~~~~~p~f~~~ 355 (361)
+|++||+++||.+|+++|||||+|+||+||+|
T Consensus 258 ~i~~id~~~Di~~fi~~~~tg~~~~~p~Fe~~ 289 (290)
T 3i2w_A 258 TINNADQQKDLKWWSNNHGINMAMNWPSFVEY 289 (290)
T ss_dssp HHHTCCHHHHHHHHHHHHSTTSCCCCCCCCCC
T ss_pred HHHhcChHHHHHHHHHHcCCCCCCCCCcccCC
Confidence 99999999999999999999999999999997
No 5
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=100.00 E-value=8.1e-53 Score=430.85 Aligned_cols=267 Identities=48% Similarity=0.826 Sum_probs=225.6
Q ss_pred CCCCCCcch-hhccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH----hhhh-
Q psy5492 28 MSHHSDENM-LIASSDSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELIE----KVMR- 101 (361)
Q Consensus 28 m~~~~~~~~-~~~f~~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~e----~g~l- 101 (361)
||+++++.+ ...|+++|||++||++|++|+++|+++|++|++||+|||.||++||++|.+|+++|..... .|++
T Consensus 1 ~~~~~~~~~~~~~f~~~FW~~~G~~~L~~r~~~g~~~~~el~~f~keRa~iE~eYAk~L~kLakk~~~~~~~~~e~gtl~ 80 (486)
T 3haj_A 1 MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVE 80 (486)
T ss_dssp ---------------CCTTSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSHHH
T ss_pred CCCCCccccCccchhhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccHHH
Confidence 788888766 8899999999999999999999999999999999999999999999999999999865433 3455
Q ss_pred hhHhHH--------HHHHHhhh-------------------------hhHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy5492 102 TCWQKD--------TYHKTVLH-------------------------IKERKEMEDAFKKAQKPWCKLLTKVNKTKNDYH 148 (361)
Q Consensus 102 ~aWq~~--------~~H~qL~~-------------------------~KE~K~~e~~~~KaqK~~~~~~~kl~KaKK~Y~ 148 (361)
.+|... ..|.+++. +|++|.+++++.++|++|.+.++.|+|+|+.|+
T Consensus 81 ~aw~~~~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~e~~~K~~~~~~kerK~~~~~~~k~qk~l~~~~~~l~KaKk~Y~ 160 (486)
T 3haj_A 81 KAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHH 160 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCBCSSSSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556532 45654432 256788999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q psy5492 149 VACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTR 228 (361)
Q Consensus 149 ~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~R 228 (361)
.+|++++.++.+...+..+.++++++++|++.+++++.+++.+|+++|+.+|..+|..+++|+++|+.+|+.||+||++|
T Consensus 161 ~~cke~e~a~~~~~~a~~d~~~t~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~y~~~~~~~~~~lQ~lEeeR 240 (486)
T 3haj_A 161 AACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQQFEEKR 240 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888877776666677888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHHHHHHh
Q psy5492 229 LQFFKDSLFSIHKCLNISQDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKLICILK 308 (361)
Q Consensus 229 I~flK~~L~~y~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
|.+||++|+.|++++++++.+
T Consensus 241 i~~lK~~L~~y~~~l~~~~~~----------------------------------------------------------- 261 (486)
T 3haj_A 241 LRFFREVLLEVQKHLDLSNVA----------------------------------------------------------- 261 (486)
T ss_dssp HHHHHHHHHHHHHHHCCSSCH-----------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhhhcch-----------------------------------------------------------
Confidence 999999999999999887654
Q ss_pred hcCCChhhHHHHHHHHHhhCChHhHHHHHHhcCCCCCCCCCcchhhccc
Q psy5492 309 CCYSRLPQIYEEFYHTINNADHEKDLKWWSNNHGVNMAMNWPQFEVRLS 357 (361)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~g~~~~~~~p~f~~~~~ 357 (361)
.++++|++|+++|++||+++||.+|+++|||||+|+||+||+|..
T Consensus 262 ----~~~~~~e~l~~~i~~id~~~Di~~Fi~~~gtG~~~~~p~Fe~y~~ 306 (486)
T 3haj_A 262 ----GYKAIYHDLEQSIRAADAVEDLRWFRANHGPGMAMNWPQFEEWSA 306 (486)
T ss_dssp ----HHHHHHHHHHHHHHTCCHHHHHHHHHHHHSTTSCCCCCCC-----
T ss_pred ----hHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCCCCCCCCceeCCc
Confidence 688999999999999999999999999999999999999999864
No 6
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=100.00 E-value=4.9e-52 Score=404.73 Aligned_cols=266 Identities=45% Similarity=0.813 Sum_probs=229.3
Q ss_pred CCCCCCcchhhccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH----hhhh-h
Q psy5492 28 MSHHSDENMLIASSDSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELIE----KVMR-T 102 (361)
Q Consensus 28 m~~~~~~~~~~~f~~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~e----~g~l-~ 102 (361)
|||++++.+ ..|+++|||++||++|++|+++|+++|+||.+||+|||+||++||++|.+||+++.+.+. .|++ .
T Consensus 1 ~~~~~~~~~-~~~~~~FW~~~g~~~l~~r~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~~~gtl~~ 79 (337)
T 2x3v_A 1 MSGSYDEAS-EEITDSFWEVGNYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLER 79 (337)
T ss_dssp --------------CCTTSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred CCCCccccc-cccccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHH
Confidence 788888776 899999999999999999999999999999999999999999999999999999987543 3555 6
Q ss_pred hHhHH--------HHHHHhhh-------------------------hhHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy5492 103 CWQKD--------TYHKTVLH-------------------------IKERKEMEDAFKKAQKPWCKLLTKVNKTKNDYHV 149 (361)
Q Consensus 103 aWq~~--------~~H~qL~~-------------------------~KE~K~~e~~~~KaqK~~~~~~~kl~KaKK~Y~~ 149 (361)
+|... ..|.+++. +|++|+++.++.++++.+.+.+..++|+|+.|+.
T Consensus 80 aw~~~~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~e~~~k~~~~~~ke~K~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~ 159 (337)
T 2x3v_A 80 AWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHL 159 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCBCSSCSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67633 46654432 2445888889999999999999999999999999
Q ss_pred HHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5492 150 ACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRL 229 (361)
Q Consensus 150 ~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI 229 (361)
+|++++.|......++.++++++++++|++.+++++..++.+|+++|+.+|..+|..+.+|+++||.+|+.||++|++||
T Consensus 160 ~c~e~e~a~~~~~~~~~~~~~s~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~Q~le~~Rl 239 (337)
T 2x3v_A 160 ACKEERLAMTREMNSKTEQSVTPEQQKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRL 239 (337)
T ss_dssp HHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHhccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998877666666667778899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHHHHHHhh
Q psy5492 230 QFFKDSLFSIHKCLNISQDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKLICILKC 309 (361)
Q Consensus 230 ~flK~~L~~y~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (361)
.+||++|+.|++++++++.+
T Consensus 240 ~~lk~~l~~~~~~~~~~~~~------------------------------------------------------------ 259 (337)
T 2x3v_A 240 VFLKEVLLDIKRHLNLAENS------------------------------------------------------------ 259 (337)
T ss_dssp HHHHHHHHHHHHHHCGGGST------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhhhhhh------------------------------------------------------------
Confidence 99999999999999776544
Q ss_pred cCCChhhHHHHHHHHHhhCChHhHHHHHHhcCCCCCCCCCcchhhccc
Q psy5492 310 CYSRLPQIYEEFYHTINNADHEKDLKWWSNNHGVNMAMNWPQFEVRLS 357 (361)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~g~~~~~~~p~f~~~~~ 357 (361)
.+.++|+.|+.+|++||++.||.+|++++|||++||||+||+|..
T Consensus 260 ---~~~~~~~~l~~~i~~id~~~Di~~fi~~~~tg~~~~~~~Fe~y~~ 304 (337)
T 2x3v_A 260 ---SYMHVYRELEQAIRGADAQEDLRWFRSTSGPGMPMNWPQFEEWNP 304 (337)
T ss_dssp ---HHHHHHHHHHHHHHHCCHHHHHHHHHHHHSTTSCCCCCCCCCCCC
T ss_pred ---hHHHHHHHHHHHHHHcChHHHHHHHHHHhCCCCCCCCCCCcCCCc
Confidence 688899999999999999999999999999999999999999865
No 7
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=100.00 E-value=1.4e-43 Score=338.31 Aligned_cols=252 Identities=18% Similarity=0.249 Sum_probs=211.9
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----HHhh---hh-hhHhHH-----
Q psy5492 41 SDSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNEL----IEKV---MR-TCWQKD----- 107 (361)
Q Consensus 41 ~~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~----~e~g---~l-~aWq~~----- 107 (361)
+++|| +||++|++|+++|+++|+||.+||+|||+||++||++|.+||++|.+. .+.+ ++ .+|...
T Consensus 2 ~~~fw--~g~~~l~~~~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~~~~~~~t~~~~w~~~l~~~e 79 (301)
T 2efk_A 2 SSGSS--GQFEVLERHTQWGLDLLDRYVKFVKERTEVEQAYAKQLRSLVKKYLPKRPAKDDPESKFSQQQSFVQILQEVN 79 (301)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-------CTTSHHHHHHHHHHHHHH
T ss_pred cchhH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHH
Confidence 46899 699999999999999999999999999999999999999999999765 3333 33 667643
Q ss_pred ---HHHHHhhh------------h-----hHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccC
Q psy5492 108 ---TYHKTVLH------------I-----KERKEMEDAFKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASAD 167 (361)
Q Consensus 108 ---~~H~qL~~------------~-----KE~K~~e~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d 167 (361)
..|.+++. + +.+|.+.+.+.++++.+.+.+..++|||+.|+.+|++.+.++.....+..+
T Consensus 80 ~~a~~h~~~a~~L~~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~a~~~ 159 (301)
T 2efk_A 80 DFAGQRELVAENLSVRVCLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQD 159 (301)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 56765543 1 234888899999999999999999999999999999988776666666667
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy5492 168 SSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSY-NPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCLNIS 246 (361)
Q Consensus 168 ~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~-r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~ld~~ 246 (361)
+++++++++|++.++.++.+.+.+|+++|..+|..+|.. +.+|.++||.+|+.||++|+.|+.+|+++|+.|++ ++..
T Consensus 160 ~~~s~~~~eK~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~p~~~~~lQ~lee~r~~~lk~~l~~~~~-~~~~ 238 (301)
T 2efk_A 160 INATKADVEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQAHFYFSQMPQIFDKLQDMDERRATRLGAGYGLLSE-AELE 238 (301)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 788999999999999999999999999999999999998 67999999999999999999999999999999987 4222
Q ss_pred cCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHHHHHHhhcCCChhhHHHHHHHHHh
Q psy5492 247 QDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKLICILKCCYSRLPQIYEEFYHTIN 326 (361)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (361)
.. +.+.++|+.|+.+|+
T Consensus 239 ~~---------------------------------------------------------------~~~~~~~~~l~~~~~ 255 (301)
T 2efk_A 239 VV---------------------------------------------------------------PIIAKCLEGMKVAAN 255 (301)
T ss_dssp HH---------------------------------------------------------------HHHHHHHHHHHHHHH
T ss_pred hh---------------------------------------------------------------hHHHHHHHHHHHHHH
Confidence 21 257789999999999
Q ss_pred hCChHhHHHHHHhcCCCCCCCCCc-chhhcccc
Q psy5492 327 NADHEKDLKWWSNNHGVNMAMNWP-QFEVRLSY 358 (361)
Q Consensus 327 ~~~~~~dl~~~~~~~g~~~~~~~p-~f~~~~~~ 358 (361)
+||++.|+.+|++.+|||+.+|-| +||+|...
T Consensus 256 ~id~~~D~~~fi~~~~~g~~~P~~~~Fe~~~~~ 288 (301)
T 2efk_A 256 AVDPKNDSHVLIELHKSGFARPGDVEFEDFSQP 288 (301)
T ss_dssp HCCHHHHHHHHHHHTGGGCCCCCCCCCCCCC--
T ss_pred hcCchhhHHHHHHHcCCCCCCCCCCCcccCCCc
Confidence 999999999999999999944433 89988653
No 8
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=335.12 Aligned_cols=239 Identities=18% Similarity=0.316 Sum_probs=206.6
Q ss_pred hccccCCCCC--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhh-hhHhH--------
Q psy5492 38 IASSDSFWEP--GNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELIEKVMR-TCWQK-------- 106 (361)
Q Consensus 38 ~~f~~sFWg~--~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~e~g~l-~aWq~-------- 106 (361)
..|.++|||+ +||++|++|+++|+++|+||.+||+|||+||++||++|.+||+++.+..+.|++ .+|..
T Consensus 6 ~~f~~~fw~~~~~g~~~l~~~~~~g~~~~~el~~f~~eRa~iE~eYak~L~kLa~~~~~~~~~gs~~~~w~~~~~~~e~~ 85 (276)
T 2v0o_A 6 AYFVENFWGEKNSGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKL 85 (276)
T ss_dssp CHHHHHBCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSSGGGHHHHHHHHHHH
T ss_pred chHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHH
Confidence 5699999999 799999999999999999999999999999999999999999999887666766 66653
Q ss_pred HHHHHHhhh-h----------h-----HHhHHHHH---HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccC
Q psy5492 107 DTYHKTVLH-I----------K-----ERKEMEDA---FKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASAD 167 (361)
Q Consensus 107 ~~~H~qL~~-~----------K-----E~K~~e~~---~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d 167 (361)
+..|.+++. + . .+|.+.+. +.++++.|.+.+..++|||+.|+.+|++.+.+.. .
T Consensus 86 a~~h~~~a~~l~~~~~~l~~~~~~~~~~rK~~~~~~~~~~~~~~~~~~~~~~l~Kak~~Y~~~c~e~e~~~~--~----- 158 (276)
T 2v0o_A 86 ANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKK--E----- 158 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c-----
Confidence 356776643 1 1 12444433 5689999999999999999999999999775532 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy5492 168 SSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCLNISQ 247 (361)
Q Consensus 168 ~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~ld~~~ 247 (361)
+.++++++|++.|+ .+|+++|..+|..+|..+..|+++||.+|+.||++|++||.+|+++|+.|+++++..+
T Consensus 159 -~~s~k~~eK~~~k~-------~ka~~~Y~~~v~~~n~~~~~~~~~~~~~~~~lQ~le~~R~~~lk~~l~~~~~~~~~~~ 230 (276)
T 2v0o_A 159 -GATQREIEKAAVKS-------KKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIH 230 (276)
T ss_dssp -CCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46789999888776 4578999999999999999999999999999999999999999999999998884322
Q ss_pred CcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHHHHHHhhcCCChhhHHHHHHHHHhh
Q psy5492 248 DPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKLICILKCCYSRLPQIYEEFYHTINN 327 (361)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (361)
. .+.++|+.++.+|++
T Consensus 231 ~----------------------------------------------------------------~~~~~~~~~~~~~~~ 246 (276)
T 2v0o_A 231 L----------------------------------------------------------------QIGQVHEEFINNMAN 246 (276)
T ss_dssp H----------------------------------------------------------------HHHHHHHHHHHHHHH
T ss_pred c----------------------------------------------------------------cHHHHHHHHHHHHHh
Confidence 1 577899999999999
Q ss_pred CChHhHHHHHHhcCCCCCCCCCc-chhhc
Q psy5492 328 ADHEKDLKWWSNNHGVNMAMNWP-QFEVR 355 (361)
Q Consensus 328 ~~~~~dl~~~~~~~g~~~~~~~p-~f~~~ 355 (361)
||++.||.+|++++|||+.+||| +||+|
T Consensus 247 id~~~D~~~fi~~~~tg~~~P~~~~Fe~y 275 (276)
T 2v0o_A 247 TTVESLIQKFAESKGTGKERPGLIEFEEC 275 (276)
T ss_dssp SCHHHHHHHHHHHHCCBSSCCCCCCCCCC
T ss_pred CCHHHHHHHHHHhcCCCCCCCCCCCCccC
Confidence 99999999999999999999999 99987
No 9
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=100.00 E-value=5.4e-43 Score=334.08 Aligned_cols=255 Identities=20% Similarity=0.293 Sum_probs=221.8
Q ss_pred hccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH----H---hhhh-hhHhHH--
Q psy5492 38 IASSDSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELI----E---KVMR-TCWQKD-- 107 (361)
Q Consensus 38 ~~f~~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~----e---~g~l-~aWq~~-- 107 (361)
..|.++||+ ||++|++|+++|+++|+||.+||+|||+||++||++|.+||+++.+.. + .|++ .+|...
T Consensus 6 ~~f~~~fw~--g~~~l~~r~~~g~~~~~el~~f~~eRa~iE~eYak~L~kLa~~~~~~~~~~~~~~~~~t~~~aw~~~~~ 83 (305)
T 2efl_A 6 MSWGTELWD--QFDNLEKHTQWGIDILEKYIKFVKERTEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTSCKAFISNLN 83 (305)
T ss_dssp CCHHHHTTT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC-------CTTSHHHHHHHHHHH
T ss_pred CChhhHHhH--HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCccccccccHHHHHHHHHH
Confidence 459999997 999999999999999999999999999999999999999999997644 1 2344 677643
Q ss_pred ------HHHHHhhh------------h----h-HHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhc
Q psy5492 108 ------TYHKTVLH------------I----K-ERKEMEDAFKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNA 164 (361)
Q Consensus 108 ------~~H~qL~~------------~----K-E~K~~e~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a 164 (361)
..|.+++. + + .+|.+.+.+.++++.+.+.+..|+|+|+.|+.+|++.+.++.....+
T Consensus 84 ~~e~~a~~h~~~a~~l~~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a~~~~~~~ 163 (305)
T 2efl_A 84 EMNDYAGQHEVISENMASQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKM 163 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56765543 1 1 34888888999999999999999999999999999988776655555
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5492 165 SADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSY-NPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCL 243 (361)
Q Consensus 165 ~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~-r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~l 243 (361)
..+++.++++++|++.++.++...+.+|+++|..+|..+|.. +.+|+++||.+|+.||++|+.|+.+|+++|+.|++..
T Consensus 164 ~~~~~~s~~~~eK~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~lQ~le~~r~~~lk~~l~~~~~~~ 243 (305)
T 2efl_A 164 DADINVTKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHEQHEYYHTHIPNIFQKIQEMEERRIVRMGESMKTYAEVD 243 (305)
T ss_dssp HHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 557778999999999999999999999999999999999997 7899999999999999999999999999999999866
Q ss_pred ccccCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHHHHHHhhcCCChhhHHHHHHH
Q psy5492 244 NISQDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKLICILKCCYSRLPQIYEEFYH 323 (361)
Q Consensus 244 d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (361)
.... + .+.++|+.|+.
T Consensus 244 ~~~~-~---------------------------------------------------------------~~~~~~~~l~~ 259 (305)
T 2efl_A 244 RQVI-P---------------------------------------------------------------IIGKCLDGIVK 259 (305)
T ss_dssp TTHH-H---------------------------------------------------------------HHHHHHHHHHH
T ss_pred HHhh-H---------------------------------------------------------------HHHHHHHHHHH
Confidence 2221 1 67889999999
Q ss_pred HHhhCChHhHHHHHHhcCCCCCCCCCc-chhhcccc
Q psy5492 324 TINNADHEKDLKWWSNNHGVNMAMNWP-QFEVRLSY 358 (361)
Q Consensus 324 ~~~~~~~~~dl~~~~~~~g~~~~~~~p-~f~~~~~~ 358 (361)
++++||++.|+.+|++++|||+.+||| +||+|...
T Consensus 260 ~~~~id~~~D~~~fi~~~~tg~~~p~~~~fe~~~~~ 295 (305)
T 2efl_A 260 AAESIDQKNDSQLVIEAYKSGFEPPGDIEFEDYTQP 295 (305)
T ss_dssp HHHTCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC--
T ss_pred HHHhcCchhhHHHHHHHcCCCCCCCCCCCCcCCCCC
Confidence 999999999999999999999999999 89988653
No 10
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=100.00 E-value=3.9e-42 Score=344.79 Aligned_cols=249 Identities=13% Similarity=0.149 Sum_probs=206.8
Q ss_pred ccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-----hhhh-hhHhH------
Q psy5492 39 ASSDSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELIE-----KVMR-TCWQK------ 106 (361)
Q Consensus 39 ~f~~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~e-----~g~l-~aWq~------ 106 (361)
.|+..|||.+||++|++|+++|+++|+||.+||+|||+||++||++|.+||++|.+... .|++ .+|..
T Consensus 3 ~f~~~lw~~~gf~~L~kr~~~g~~lledl~~F~reRA~IE~eYAk~L~kLakk~~~k~~~~~~~~~tl~~aW~~ll~ete 82 (406)
T 4dyl_A 3 GFSSELCSPQGHGVLQQMQEAELRLLEGMRKWMAQRVKSDREYAGLLHHMSLQDSGGQSRAISPDSPISQSWAEITSQTE 82 (406)
T ss_dssp CHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CCSHHHHHHHHHHHHHH
T ss_pred CcchhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCChHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999986332 2444 67753
Q ss_pred --HHHHHHhhh-------------hh----HHhHHHHHHHHHhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHhhccc
Q psy5492 107 --DTYHKTVLH-------------IK----ERKEMEDAFKKAQKPWCKLL-TKVNKTKNDYHVACKAERSASNQERNASA 166 (361)
Q Consensus 107 --~~~H~qL~~-------------~K----E~K~~e~~~~KaqK~~~~~~-~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~ 166 (361)
+..|.+++. ++ .+|.+++.+.+++++|.+.+ +.|+|+|++|+.+|++.+.|+.+...+
T Consensus 83 ~~a~~H~~lae~L~~~v~~~l~~~~ke~~~~rK~~~~~~~klqk~~~k~~~~~lekaKk~Y~~~cke~e~A~~k~~~~-- 160 (406)
T 4dyl_A 83 GLSRLLRQHAEDLNSGPLSKLSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKYQEA-- 160 (406)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 357776533 22 34888899999999999999 899999999999999988775433322
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy5492 167 DSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNP-KYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCLNI 245 (361)
Q Consensus 167 d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~-~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~ld~ 245 (361)
..+++++|++.++.++..++.+++++|..+|..+|..+. +|.++||.+|+.||+||+.||.+|+++|+.|+++.+.
T Consensus 161 ---~k~ke~eK~~~k~~k~~~~~~~a~neY~~~l~~~N~~~~~yy~~~lp~~~d~lQ~lEe~Ri~~lk~~L~~~~~~~~~ 237 (406)
T 4dyl_A 161 ---SKDKDRDKAKDKYVRSLWKLFAHHNRYVLGVRAAQLHHQHHHQLLLPGLLRSLQDLHEEMACILKEILQEYLEISSL 237 (406)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred ---ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 224889999999999999999999999999999999776 6899999999999999999999999999999999855
Q ss_pred ccCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHHHHHHhhcCCChhhHHHHHHHHH
Q psy5492 246 SQDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKLICILKCCYSRLPQIYEEFYHTI 325 (361)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (361)
.. + .+.++|++|+++|
T Consensus 238 ~~-~---------------------------------------------------------------~~~~~~~~l~~~i 253 (406)
T 4dyl_A 238 VQ-D---------------------------------------------------------------EVVAIHREMAAAA 253 (406)
T ss_dssp SS-H---------------------------------------------------------------HHHHHHHHHHHHH
T ss_pred hH-H---------------------------------------------------------------HHHHHHHHHHHHH
Confidence 42 3 6788999999999
Q ss_pred hhCChHhHHHHHHhcCCCCCCCCCc-chhhcc
Q psy5492 326 NNADHEKDLKWWSNNHGVNMAMNWP-QFEVRL 356 (361)
Q Consensus 326 ~~~~~~~dl~~~~~~~g~~~~~~~p-~f~~~~ 356 (361)
++||++.|+.+|++.||||..+|-| +||+..
T Consensus 254 ~~id~~~D~~~Fi~~~~tg~~~P~~~~Fep~~ 285 (406)
T 4dyl_A 254 ARIQPEAEYQGFLRQYGSAPDVPPCVTFDESL 285 (406)
T ss_dssp HHCCGGGTTHHHHHHHCCCCCCCCCCCCCTTC
T ss_pred HHcCcHHHHHHHHHHcCCCCCCCCCCccccCc
Confidence 9999999999999999999988876 898654
No 11
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=9.4e-23 Score=195.59 Aligned_cols=178 Identities=11% Similarity=0.195 Sum_probs=131.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hHH----------------hhhh-h
Q psy5492 48 GNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNE--------LIE----------------KVMR-T 102 (361)
Q Consensus 48 ~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~--------~~e----------------~g~l-~ 102 (361)
.+.++|..||.+|..+|+||++||+|||.||+.||++|++|+++|.+ .++ .|++ .
T Consensus 43 qa~~iL~~Rl~~~k~i~keL~~f~kERa~IEe~YakqLrkLakk~~~l~k~~~~~~~~~~vlt~ee~~~~~~~e~G~l~~ 122 (287)
T 3g9g_A 43 EATETIRIRLSQVKLLNKDFYLLFKELANLKRNYAQQLRKIIAENEDITKILNAQMIESNVLTPQEMSAFRFNSLGELRN 122 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTTSSCHHHHHHCCCCCSTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccchhhccccccccccHHH
Confidence 48999999999999999999999999999999999999999999873 112 2334 6
Q ss_pred hHhHH--------HHHHHhhh-hhHHhHHHHHH-------------HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy5492 103 CWQKD--------TYHKTVLH-IKERKEMEDAF-------------KKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQ 160 (361)
Q Consensus 103 aWq~~--------~~H~qL~~-~KE~K~~e~~~-------------~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~ 160 (361)
+|+.. ..|..++. ++ .+++..+ .+++..+....+.++.+++
T Consensus 123 ~W~~v~~e~e~~a~~H~~la~~L~--~ev~~pL~~~~e~~~~~~e~~~l~~~L~~~ak~le~~~k--------------- 185 (287)
T 3g9g_A 123 VWDTVIEELKSDLKSSTEYYNTLD--QQVVRELKESVENNTSWRESKDLHSKLSKNAASIEHYSK--------------- 185 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--HHTHHHHHCSSSSCHHHHHHHHHHHHHHHHHHHHHHCSS---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHh---------------
Confidence 77643 46666654 22 1222222 1222222222111111110
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 161 ERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIH 240 (361)
Q Consensus 161 e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~ 240 (361)
. ..++..++..+..|+.++|.+|+.||++|+.||.+||++|+.|+
T Consensus 186 ---------------------------k--------~~a~~~le~a~~qWes~aP~~fe~fQ~lEEeRL~~Lkd~L~~y~ 230 (287)
T 3g9g_A 186 ---------------------------N--------NENSSHLEEARRQWDQQSPYLFELFETIDYNRLDTLKNCMLRFQ 230 (287)
T ss_dssp ---------------------------C--------CSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------h--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01233577889999999999999999999999999999999999
Q ss_pred HHhccccCcchhhhhhhHHhHHHHhhhcCCCchhhHHHHhhhhhHHHHhhcCchhHHHhHHHHHHHHhhcCCChhhHHHH
Q psy5492 241 KCLNISQDPTVLHIKERKEMEDAFKKAQKPWCKTVLHIKERKEMEDAFKKAQKPWCIMQHLKLICILKCCYSRLPQIYEE 320 (361)
Q Consensus 241 ~~ld~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (361)
++++..+. +..+.+|+
T Consensus 231 ~~~sd~~~----------------------------------------------------------------~~~~~~E~ 246 (287)
T 3g9g_A 231 TSFSDYLL----------------------------------------------------------------NTTKECET 246 (287)
T ss_dssp HHHHHHHH----------------------------------------------------------------HHHHHHHH
T ss_pred HHHHHHHH----------------------------------------------------------------HHHHHHHH
Confidence 99944332 67889999
Q ss_pred HHHHHhhCChHhHHHHHHhcC
Q psy5492 321 FYHTINNADHEKDLKWWSNNH 341 (361)
Q Consensus 321 ~~~~~~~~~~~~dl~~~~~~~ 341 (361)
++..|.++|+++||..|+...
T Consensus 247 ~~~~ll~~dve~eI~~Fa~~~ 267 (287)
T 3g9g_A 247 VMTKFLAFEPQSEIDRFAKDA 267 (287)
T ss_dssp HHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHH
Confidence 999999999999999998764
No 12
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=99.72 E-value=2.3e-15 Score=143.47 Aligned_cols=200 Identities=16% Similarity=0.178 Sum_probs=151.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh---hhh-----hhHhHH-HHH-------
Q psy5492 47 PGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELIEK---VMR-----TCWQKD-TYH------- 110 (361)
Q Consensus 47 ~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~e~---g~l-----~aWq~~-~~H------- 110 (361)
++|.+.++.|++..+..|+||..|+++|+.||++||++|.|||+.+...+.. +|+ .++... .++
T Consensus 13 d~Gv~~lL~r~K~s~~~~Ke~~~flkKRa~lE~E~Ak~L~KLa~~~~~~~~~~~~~pl~~i~~~~le~d~~~~~~~~~~~ 92 (279)
T 3qwe_A 13 KGGVDAALEYAKTWSRYAKELLAWTEKRASYELEFAKSTMKIAEAGKVSIQQQSHMPLQYIYTLFLEHDLSLGTLAMETV 92 (279)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3699999999999999999999999999999999999999999887665432 344 122111 111
Q ss_pred --------HHhhhh-----hHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccC--CCCCHHHH
Q psy5492 111 --------KTVLHI-----KERKEMEDAFKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASAD--SSLSMDQL 175 (361)
Q Consensus 111 --------~qL~~~-----KE~K~~e~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d--~~~s~ke~ 175 (361)
..|..+ |-+|.+.+...+++|.+......++|||..|.++|.+-+.+..-...+... .....|.+
T Consensus 93 ~lq~~~~~~~L~~~~~e~ek~RK~~Ke~w~r~eKk~~dae~~l~KAK~~Y~~r~ee~ekak~~~~~~e~~q~~~~~~K~l 172 (279)
T 3qwe_A 93 AQQKRDYYQPLAAKRTEIEKWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSPEDSAPQASPGPSKQQ 172 (279)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-------------HHH
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchh
Confidence 122222 345888888889999999999999999999999999966442211111100 01234666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy5492 176 KKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCLNIS 246 (361)
Q Consensus 176 eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~ld~~ 246 (361)
+|-..-=+.+...++.|+.+|+.+|..+|..+.+++..-|.+...+|++=.+=-..||.+..+|.......
T Consensus 173 ek~r~~EEea~~K~eeAd~~Y~~~V~~a~~~r~eL~~tk~~~v~~Lr~LI~e~D~~lk~~t~~~fq~~~~~ 243 (279)
T 3qwe_A 173 ERRRRSREEAQAKAQEAEALYQACVREANARQQDLEIAKQRIVSHVRKLVFQGDEVLRRVTLSLFGLRGAQ 243 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555556688889999999999999999999999999999999999999988899999888887766443
No 13
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=94.05 E-value=1.1 Score=44.09 Aligned_cols=38 Identities=5% Similarity=-0.268 Sum_probs=30.8
Q ss_pred HHHHhhhcCCCchhhHHHHh----hhhhHHHHhhcCchhHHH
Q psy5492 261 EDAFKKAQKPWCKTVLHIKE----RKEMEDAFKKAQKPWCIM 298 (361)
Q Consensus 261 ~~~~~~~~~p~~~~~~~~k~----~~~~~~~~~~~~~~~~~~ 298 (361)
+...+.+..|..|..+||.+ +..|.||-+-|++.|-..
T Consensus 249 l~~~i~~id~~~D~~~Fi~~~~tg~~~P~~~~Fep~~~~d~~ 290 (406)
T 4dyl_A 249 MAAAAARIQPEAEYQGFLRQYGSAPDVPPCVTFDESLLEEGE 290 (406)
T ss_dssp HHHHHHHCCGGGTTHHHHHHHCCCCCCCCCCCCCTTCCC---
T ss_pred HHHHHHHcCcHHHHHHHHHHcCCCCCCCCCCccccCcccccc
Confidence 44567888999999999999 678999999999999765
No 14
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=89.16 E-value=14 Score=34.24 Aligned_cols=45 Identities=11% Similarity=0.138 Sum_probs=33.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5492 199 ALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCL 243 (361)
Q Consensus 199 ~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~l 243 (361)
+++.++.-+..+++-....|...=-.|+.|..||-+.+..+.++.
T Consensus 167 ~~e~v~~~~~~le~~~~~~lr~aL~EERrRycflv~~~~~v~~~~ 211 (253)
T 2ykt_A 167 YIDAISNKQGELENYVSDGYKTALTEERRRFCFLVEKQCAVAKNS 211 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666666777778888888889999999888777776666
No 15
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=84.61 E-value=22 Score=31.89 Aligned_cols=49 Identities=22% Similarity=0.325 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 180 DRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKC 242 (361)
Q Consensus 180 ~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~ 242 (361)
.++.+++.+.+.|+++|...-+ .+.+.+..+...|+.++...|..+...
T Consensus 179 ~kl~kae~el~~ak~~ye~ln~--------------~L~~eLp~l~~~~~~~~~~~l~~f~~~ 227 (251)
T 2fic_A 179 AKIAKAEEELIKAQKVFEEMNV--------------DLQEELPSLWNSRVGFYVNTFQSIAGL 227 (251)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677777777753322 334445555567777777777666533
No 16
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=84.39 E-value=21 Score=31.56 Aligned_cols=46 Identities=22% Similarity=0.439 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5492 184 KAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCL 243 (361)
Q Consensus 184 K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~l 243 (361)
+++.+.+.|+++|... .. .+.+.+..+...|+.++...|..+...-
T Consensus 170 ~ae~el~~ak~~ye~l-------n~-------~L~~eLp~l~~~~~~~~~~~l~~fv~~q 215 (244)
T 1uru_A 170 KGREQLEEARRTYEIL-------NT-------ELHDELPALYDSRILFLVTNLQTLFATE 215 (244)
T ss_dssp TCHHHHHHHHHHHHHH-------HH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-------HH-------HHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667777777432 22 3334445556678888887777775444
No 17
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=76.62 E-value=44 Score=30.34 Aligned_cols=158 Identities=13% Similarity=0.147 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHh-HHHHHHHhhh-----hhHHhHHHHHHH-
Q psy5492 55 KRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELIEKVMRTCWQ-KDTYHKTVLH-----IKERKEMEDAFK- 127 (361)
Q Consensus 55 krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~e~g~l~aWq-~~~~H~qL~~-----~KE~K~~e~~~~- 127 (361)
+.-.+=.+.++.+..-|.+-+..+.++|.-+..++.+- .+.+ .... -+..|+.+.. ++..+.+..+++
T Consensus 21 ~~Y~~L~~~~~~l~~~~~~l~qtq~~lG~~f~~l~~~~---p~l~--~~f~~~~~~~r~~~k~g~~Ll~~L~~f~s~l~T 95 (224)
T 1i4d_A 21 RKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKS---PELQ--EEFGYNAETQKLLCKNGETLLGAVNFFVSSINT 95 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---GGGH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---cHHH--HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 33333455566666666777777888887777777652 1111 1111 1234454432 111223323332
Q ss_pred ---HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 128 ---KAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELN 204 (361)
Q Consensus 128 ---KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln 204 (361)
++-..=....+..+.||=.|...|.+.+....... +++...++ +.+......++..|
T Consensus 96 ~~~kaI~DT~lTIk~ye~aR~EY~ay~~~~ee~~~~~~--------~~~~l~rv----e~~q~~~~~ak~kf-------- 155 (224)
T 1i4d_A 96 LVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPR--------DAGTRGRL----ESAQATFQAHRDKY-------- 155 (224)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------------------CHHHHHHHHHHHHH--------
T ss_pred HHhHhccHHHHHHHHHHHHhHhHHHHHhhHHHhhcccc--------cccchhhH----HHHHHHHHHHHHHH--------
Confidence 22222234567889999999999987553321110 11111222 22333344444444
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5492 205 SYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCL 243 (361)
Q Consensus 205 ~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~l 243 (361)
..-=..++.+++-+++.|+..|...|..|++.+
T Consensus 156 ------~kLR~DV~~KleLLd~~r~kv~~~qL~~~~~al 188 (224)
T 1i4d_A 156 ------EKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAV 188 (224)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 333446799999999999999999999999888
No 18
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=64.43 E-value=1e+02 Score=29.39 Aligned_cols=68 Identities=16% Similarity=0.186 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5492 137 LTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNS 205 (361)
Q Consensus 137 ~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~ 205 (361)
++.+...|+.|+....+-+++..+....... .......+.+...+..++..-..+.-+|...|+.++.
T Consensus 123 i~~~ke~kk~fek~~~~yd~al~k~~~~~k~-k~~e~~~~ea~~~l~~~rk~f~~~~ldy~~~l~~l~~ 190 (385)
T 2q13_A 123 LKEILTLKEVFQIASNDHDAAINRYSRLSKK-RENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQY 190 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCSS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677788888777766665544322211 1122223334455556666666677777766666653
No 19
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=64.25 E-value=55 Score=26.36 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q psy5492 193 KEKYELALQELNSYNPKYMEDMSVVFDKCQEMET 226 (361)
Q Consensus 193 k~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe 226 (361)
-++++..++.+.+-|++|+.++..+=-.||+.++
T Consensus 27 i~eLk~~ve~lEkERDFYF~KLRdIEiLcQe~~~ 60 (106)
T 4e61_A 27 IEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQD 60 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678889999999999999999999888888754
No 20
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=62.21 E-value=1.4e+02 Score=30.26 Aligned_cols=27 Identities=19% Similarity=0.201 Sum_probs=15.6
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 127 KKAQKPWCKLLTKVNKTKNDYHVACKA 153 (361)
Q Consensus 127 ~KaqK~~~~~~~kl~KaKK~Y~~~Cke 153 (361)
..-|+.+...-+.-..+|..|+.+-.+
T Consensus 12 a~yq~elarvqkana~aka~Ye~~~ae 38 (497)
T 3iox_A 12 TAYQTELARVQKANADAKAAYEAAVAA 38 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555677777776554
No 21
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=61.67 E-value=92 Score=28.02 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=32.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 49 NYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNK 90 (361)
Q Consensus 49 Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaK 90 (361)
..+.+-.|++.-++.|+.+.+-.++=......|+..|..++.
T Consensus 29 ~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~ 70 (265)
T 2q12_A 29 DATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEK 70 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566777778888888888888887777778888888887654
No 22
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=61.43 E-value=1.3e+02 Score=29.77 Aligned_cols=75 Identities=8% Similarity=0.113 Sum_probs=39.3
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHH-------HHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 124 DAFKKAQKPWCKLLTKVNKTKNDYHVACK-------AERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKY 196 (361)
Q Consensus 124 ~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ck-------ee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY 196 (361)
..+.++.+.+....++.+.++..+..+-. +.+.++.+... ...++.+....+..+-..++..+..|
T Consensus 150 ~~l~KaKk~Y~~~cke~e~a~~~~~~a~~d~~~t~k~~eK~~~k~~k-------~~~~~~~a~~~Y~~~v~~~n~~~~~y 222 (486)
T 3haj_A 150 KEVEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEK-------CKQDVLKTKEKYEKSLKELDQGTPQY 222 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCSHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666666666666666666655421 11111111111 12334555566666666677777777
Q ss_pred HHHHHHHHh
Q psy5492 197 ELALQELNS 205 (361)
Q Consensus 197 ~~~l~~ln~ 205 (361)
...+..+=.
T Consensus 223 ~~~~~~~~~ 231 (486)
T 3haj_A 223 MENMEQVFE 231 (486)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766655544
No 23
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=60.02 E-value=96 Score=27.73 Aligned_cols=26 Identities=12% Similarity=0.318 Sum_probs=18.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 48 GNYKRTTKRIEDGYKLCNDLIALIQE 73 (361)
Q Consensus 48 ~Gy~~l~krik~G~~~ckeL~~flKE 73 (361)
..|..+-+|++.-..+|..|..-.+.
T Consensus 15 ~d~~~lE~r~d~~~~~~~~l~k~~~~ 40 (240)
T 2z0v_A 15 DEFLDMERKIDVTNKVVAEILSKTTE 40 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788888888877777777665543
No 24
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=58.17 E-value=33 Score=25.75 Aligned_cols=42 Identities=17% Similarity=0.133 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q psy5492 187 EEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTR 228 (361)
Q Consensus 187 ~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~R 228 (361)
+.++.-.+.+...++.+.+-|++|+..+..+=..||..|..-
T Consensus 12 qaLk~Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~e~e~ 53 (75)
T 3mtu_A 12 QMLKLDKENALDRAEQAEADKDFYFGKLRNIELICQENEGEN 53 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhh
Confidence 335555677888888899999999999999999999987643
No 25
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=51.50 E-value=1.5e+02 Score=27.30 Aligned_cols=51 Identities=20% Similarity=0.089 Sum_probs=37.1
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc
Q psy5492 196 YELALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCL-NIS 246 (361)
Q Consensus 196 Y~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~l-d~~ 246 (361)
....++.+|.-...+++--...+...--.|+.|..||-+.+..+.++- ++.
T Consensus 169 l~~a~q~v~~~~~~le~~~~~~~r~AL~EERrRycflv~~l~pv~~~e~~~~ 220 (253)
T 2d1l_A 169 LDSALQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISMLRPVIEEEISML 220 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 334455666666677777778888888889999999988877776653 444
No 26
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=50.86 E-value=98 Score=25.06 Aligned_cols=76 Identities=16% Similarity=0.139 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy5492 130 QKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPK 209 (361)
Q Consensus 130 qK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~ 209 (361)
+.........++.-|.+|.....+.-.+.+ .-++++.++ ......|...|..+....++
T Consensus 9 ~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~----------~Lq~El~~l-----------r~~~~~l~~~iReLEq~NDD 67 (111)
T 2v66_B 9 QADNQRLKYEVEALKEKLEHQYAQSYKQVS----------VLEDDLSQT-----------RAIKEQLHKYVRELEQANDD 67 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHH-----------HHHHHHHHHHHHHHHHhchH
Confidence 334444556677777778776665333211 112334333 34677888888888888899
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy5492 210 YMEDMSVVFDKCQEMET 226 (361)
Q Consensus 210 yeeeM~~~~d~~Q~lEe 226 (361)
++..-..++..+++||.
T Consensus 68 LER~~R~t~~SLeD~E~ 84 (111)
T 2v66_B 68 LERAKRATIVSLEDFEQ 84 (111)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHH
Confidence 99998889989988884
No 27
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=46.55 E-value=1.3e+02 Score=25.30 Aligned_cols=98 Identities=17% Similarity=0.268 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 121 EMEDAFKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELAL 200 (361)
Q Consensus 121 ~~e~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l 200 (361)
-+++.+++++..+.....++..|.+.++..=+..+...++. ......++-+...+..+...+..|+..|...-
T Consensus 7 llEeeLer~eerl~~a~~kLeeaek~adE~eR~~k~lE~r~-------~~deEr~~~lE~qLkeak~~aeeadrKyeE~~ 79 (147)
T 2b9c_A 7 LVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRA-------QKDEEKMEIQEIQLKEAKHIAEDADRKYEEVA 79 (147)
T ss_dssp ----CCGGGGTTTTHHHHHHHHHHHHHHHHTHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------cccHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 35566777777788888888888888876433322221111 12345667778888889999999999998775
Q ss_pred HHHHhhhh---hHHHHHHHHHHHHHHHH
Q psy5492 201 QELNSYNP---KYMEDMSVVFDKCQEME 225 (361)
Q Consensus 201 ~~ln~~r~---~yeeeM~~~~d~~Q~lE 225 (361)
.++--+-. .-++.....-..+.++|
T Consensus 80 RKl~~~E~dLeraeeRae~aE~k~~eLE 107 (147)
T 2b9c_A 80 RKLVIIESDLERAEERAELSEGKCAELE 107 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55543332 33344444444444444
No 28
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=44.48 E-value=1.5e+02 Score=30.20 Aligned_cols=20 Identities=10% Similarity=0.026 Sum_probs=15.3
Q ss_pred ChhhHHHHHHHHHhhCChHh
Q psy5492 313 RLPQIYEEFYHTINNADHEK 332 (361)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~ 332 (361)
-..+-|+++...|++++...
T Consensus 173 vd~~sY~~~QKQLeQv~a~d 192 (562)
T 3ghg_A 173 VDLKDYEDQQKQLEQVIAKD 192 (562)
T ss_dssp CCHHHHHHHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHHHHHhhcc
Confidence 44567999999999887643
No 29
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=43.29 E-value=2.3e+02 Score=27.07 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 137 LTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELN 204 (361)
Q Consensus 137 ~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln 204 (361)
.+.+...|+.|+..-.+-+.+..+....... ...++........+..+...-..+.-+|-..|+.+.
T Consensus 146 i~~~ke~kK~Fek~~~~Yd~~l~Ky~~~~k~-k~~~~~~~e~~~~l~~~Rk~f~~asldyv~~l~~lq 212 (407)
T 4h8s_A 146 LTEVSTLKDLFGLASNEHDLSMAKYSRLPKK-KENEKVKTEVGKEVAAARRKQHLSSLQYYCALNALQ 212 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCST-TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556666666666655443333211110 112221222223344444445555566666665554
No 30
>2l0l_A Oxidoreductase THAT catalyzes reoxidation of DSBA disulfide isomerase I; DSBB, membrane protein, organic solvent, folding; NMR {Escherichia coli BW2952} PDB: 2l0m_A
Probab=38.40 E-value=6.3 Score=24.01 Aligned_cols=18 Identities=22% Similarity=0.362 Sum_probs=14.5
Q ss_pred chhHHHhHHHHHHHHhhc
Q psy5492 293 KPWCIMQHLKLICILKCC 310 (361)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~ 310 (361)
+||||+|-+-++-+...+
T Consensus 1 ~pLCI~QR~a~~~i~~~~ 18 (27)
T 2l0l_A 1 KKLSIYERVALFGVLGAA 18 (27)
T ss_dssp CCCSSSSHHHHHHHSSTT
T ss_pred CCchHHHHHHHHHHHHHH
Confidence 699999999888765554
No 31
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=36.98 E-value=5.1e+02 Score=32.39 Aligned_cols=142 Identities=10% Similarity=0.095 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q psy5492 120 KEMEDAFKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYEL- 198 (361)
Q Consensus 120 K~~e~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~- 198 (361)
.+..+.+..+++.+...-..|+++.+.-+..-.+....+......+ ....++.++++.+...+......++++...
T Consensus 1930 ~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k---~~v~~~~~~~~~~~~ei~~~k~~~e~dL~~A 2006 (3245)
T 3vkg_A 1930 RDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQ---KDARELQVQLDVRNKEIAVQKVKAYADLEKA 2006 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q ss_pred --------HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccCcchhhhhhhHHhHHHHhhh
Q psy5492 199 --------ALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCL-NISQDPTVLHIKERKEMEDAFKKA 267 (361)
Q Consensus 199 --------~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~l-d~~~~~~~~~~~~~~~~~~~~~~~ 267 (361)
.|..++..-..=++.+..+-+.++++| ++|.-+++-+-....-- .+. ...+.++.|+..+...++|
T Consensus 2007 ~Pa~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le-~~l~~L~~~~~~~~~ek~~L~--~e~~~~~~kl~rA~~Li~g 2081 (3245)
T 3vkg_A 2007 EPTGPLREEVEQLENAANELKLKQDEIVATITALE-KSIATYKEEYATLIRETEQIK--TESSKVKNKVDRSIALLDN 2081 (3245)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHh
No 32
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=36.79 E-value=2.4e+02 Score=25.47 Aligned_cols=171 Identities=9% Similarity=0.140 Sum_probs=86.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HHhhhhhhHhHHHHHHHhhh-hhHH-hHHH
Q psy5492 49 NYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNEL---IEKVMRTCWQKDTYHKTVLH-IKER-KEME 123 (361)
Q Consensus 49 Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~---~e~g~l~aWq~~~~H~qL~~-~KE~-K~~e 123 (361)
+|...+..+ +.+.+-+..-++.=+..=..|-..|.+++..+... .+.|. ..-+....|+.|-. +.+. +.+.
T Consensus 24 qfnP~l~nl---v~lg~~Y~kAl~a~~~A~~~y~dA~~Kige~A~~S~~skeLG~-vL~qis~~hR~i~~~le~~~k~f~ 99 (222)
T 3ok8_A 24 QFNPALENL---VYLGNNYLRAFHALSEAAEVYFSAIQKIGEQALQSSTSQILGE-ILVQMSDTQRHLNSDLEVVVQTFH 99 (222)
T ss_dssp THHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCcchHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444443 33344444455555566678888888888877542 22331 22333445555532 1110 1111
Q ss_pred HH-HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 124 DA-FKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQE 202 (361)
Q Consensus 124 ~~-~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ 202 (361)
.+ +.-+++....-.+-+..+.|.|..-++..-.. .++ ...++.|+..+.+ +....| ++.
T Consensus 100 ~elI~pLE~k~e~D~k~i~~~~K~y~~e~k~~~~~--leK--------~~~elkK~~rksq-------k~~~k~---~e~ 159 (222)
T 3ok8_A 100 GDLLQHMEKNTKLDMQFIKDSCQHYEIEYRHRAAN--LEK--------CMSELWRMERKRD-------KNAREM---KES 159 (222)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH--------HHHHHHHHHHTTC-------TTHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH--HHH--------HHHHHHHhhhhhc-------cChHHH---HHH
Confidence 11 11222222222333455566666655541111 010 1123333332211 111224 344
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5492 203 LNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDSLFSIHKCL 243 (361)
Q Consensus 203 ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~L~~y~~~l 243 (361)
++.-+.++..=....|...---|+.|..||-+--..+.+++
T Consensus 160 v~~~q~el~~f~~~s~r~Al~EErRRYcFL~ekhc~~~~~~ 200 (222)
T 3ok8_A 160 VNRLHAQMQAFVSESKRAAELEEKRRYRFLAEKHLLLSNTF 200 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555677777778888888899999999988777777776
No 33
>3tq7_B Microtubule-associated protein RP/EB family membe; CAP-Gly domain, protein-protein interaction, microtubule BIN cytoskeleton, protein binding; 2.30A {Homo sapiens} SCOP: a.245.1.1
Probab=34.55 E-value=51 Score=25.32 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 194 EKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRLQFFKDS 235 (361)
Q Consensus 194 ~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI~flK~~ 235 (361)
.+++.+|..+.+-|++|+.++..+=-.||+.+..-..+++.+
T Consensus 11 ~eLk~~ve~lEkERDFYF~KLRdIEiLcQ~~e~~~~~~~~~I 52 (82)
T 3tq7_B 11 VDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGI 52 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Confidence 567888999999999999999999999998876544444443
No 34
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=32.91 E-value=38 Score=28.57 Aligned_cols=24 Identities=29% Similarity=0.551 Sum_probs=22.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Q psy5492 207 NPKYMEDMSVVFDKCQEMETTRLQ 230 (361)
Q Consensus 207 r~~yeeeM~~~~d~~Q~lEe~RI~ 230 (361)
+..|.+++..+.+.+++||..||+
T Consensus 110 R~rwi~dL~esI~e~~eme~~rie 133 (140)
T 3qwm_A 110 RKKFTDDLRESIAEVQEMEKHRIE 133 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999995
No 35
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=31.98 E-value=2.8e+02 Score=24.81 Aligned_cols=24 Identities=4% Similarity=-0.137 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Q psy5492 136 LLTKVNKTKNDYHVACKAERSASN 159 (361)
Q Consensus 136 ~~~kl~KaKK~Y~~~Ckee~~a~~ 159 (361)
.++.+.++|++.+.+..+-+++..
T Consensus 150 ~~k~i~k~rkkl~~~rLdyD~~k~ 173 (256)
T 1zww_A 150 DLREIQHHLKKLEGRRLDFGYKKK 173 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777777777666543
No 36
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=30.94 E-value=4.3e+02 Score=26.68 Aligned_cols=89 Identities=21% Similarity=0.177 Sum_probs=41.9
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5492 129 AQKPWCKLLTKVNKTKNDYHVACKAERSA--SNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSY 206 (361)
Q Consensus 129 aqK~~~~~~~kl~KaKK~Y~~~Ckee~~a--~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~ 206 (361)
-|..++..-.+|.+.++.+..+-.+-+.+ ..+..++. -..+-+. .++.-..++..|...+.+++.-
T Consensus 7 yq~~la~yq~elarvqkana~aka~Ye~~~ae~~a~n~~-----i~aeNea-------ikkrNa~aka~Ye~~l~kY~~d 74 (497)
T 3iox_A 7 YQAKLTAYQTELARVQKANADAKAAYEAAVAANNAANAA-----LTAENTA-------IKKRNADAKADYEAKLAKYQAD 74 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH-----HHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH
Confidence 35556666667777777777765553322 11111110 1111122 2222333455555555555555
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Q psy5492 207 NPKYMEDMSVVFDKCQEMETTRL 229 (361)
Q Consensus 207 r~~yeeeM~~~~d~~Q~lEe~RI 229 (361)
...|..++...-..+.+-|..+.
T Consensus 75 lakY~~~~AeY~~kl~aYe~~~~ 97 (497)
T 3iox_A 75 LAKYQKDLADYPVKLKAYEDEQT 97 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555554444444444444433
No 37
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=29.66 E-value=2.9e+02 Score=24.28 Aligned_cols=75 Identities=13% Similarity=0.125 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Q psy5492 132 PWCKLLTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYM 211 (361)
Q Consensus 132 ~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~ye 211 (361)
...+..++.+..+-.|+..-...+..+.+ + .-.+..+.+++.+++.++..-+...+....-|..++..+..|.
T Consensus 145 ~i~~~ikKR~~k~lDyD~~~~~l~kl~~k----~---~kd~~kl~kae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~ 217 (251)
T 2fic_A 145 DIKSRIAKRGRKLVDYDSARHHYESLQTA----K---KKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFY 217 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhc----C---cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555665443332211111 0 1134567788888888888888887777777777777666555
Q ss_pred HH
Q psy5492 212 ED 213 (361)
Q Consensus 212 ee 213 (361)
..
T Consensus 218 ~~ 219 (251)
T 2fic_A 218 VN 219 (251)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 38
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=28.69 E-value=3.3e+02 Score=25.07 Aligned_cols=67 Identities=16% Similarity=0.219 Sum_probs=32.7
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy5492 122 MEDAFKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKA 192 (361)
Q Consensus 122 ~e~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~ka 192 (361)
++..+..++..+......+..++..|..+-.+.+..+... .....+..+++..+..+..++.++..+
T Consensus 68 ~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~----~~~~~s~~~~~~a~~~~~~a~a~~~~~ 134 (369)
T 4dk0_A 68 QINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLY----GQKATSLDTLNTAKATLNNAKAEMDVV 134 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGG----GSSCSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HcCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555555666666655544422221111 122467777776666555554444433
No 39
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=28.67 E-value=3.6e+02 Score=25.02 Aligned_cols=79 Identities=8% Similarity=0.088 Sum_probs=44.2
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-------HHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy5492 120 KEMEDAFKKAQKPWCKLLTKVNKTKNDYHVAC-------KAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKA 192 (361)
Q Consensus 120 K~~e~~~~KaqK~~~~~~~kl~KaKK~Y~~~C-------kee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~ka 192 (361)
......+.|+.+.+......++.++..+..+. ++.+.++.+.. -...+..+....+..+-..++..
T Consensus 153 ~~~~~~l~KaKk~Y~~~c~e~e~a~~~~~~~~~d~~~~~k~~eK~~~k~~-------k~~~~~~~a~~~Y~~~v~~~n~~ 225 (350)
T 3aco_A 153 AKKLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIE-------KCKQDVLKTKEKYEKSLKELDQG 225 (350)
T ss_dssp HHHHHHHHHTTTTHHHHHHHHHHHHHHHTTSSSSSSCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455677888888888888888887664332 11111111111 11234455566666666667777
Q ss_pred HHHHHHHHHHHHh
Q psy5492 193 KEKYELALQELNS 205 (361)
Q Consensus 193 k~eY~~~l~~ln~ 205 (361)
+..|...+..+-.
T Consensus 226 ~~~~~~~~~~~~~ 238 (350)
T 3aco_A 226 TPQYMENMEQVFE 238 (350)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777665555433
No 40
>3csx_A Putative uncharacterized protein; metalloprotein, nitrogen fixation, cyanobacteria, circadian rhythms, metal binding protein, unknown function; 1.84A {Cyanothece}
Probab=26.92 E-value=2e+02 Score=21.98 Aligned_cols=60 Identities=10% Similarity=0.184 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy5492 170 LSMDQLKKMQDRVQKAKEEVQKAKEKYELALQELNSYNPKYMEDMSVVFDKCQEMETTRL 229 (361)
Q Consensus 170 ~s~ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lEe~RI 229 (361)
.++.+++-++.++.|....+..++-+.-..++.+=.--..-.+--..+++.|+++++.|-
T Consensus 12 ~t~~di~eLkkevkKL~~~A~q~kmdLHDLaEdLP~~w~~i~~vA~~tyda~~~l~~ak~ 71 (81)
T 3csx_A 12 PTPEAVADLKKKVRKLNSKAGQMKMDLHDLAEGLPTDYENLVETAEKTYEIFRELDQLKK 71 (81)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666667777777777777777776666666433223333444567788888887553
No 41
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=26.53 E-value=6.4e+02 Score=27.83 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5492 173 DQLKKMQDRVQKAKEEVQKAKEKYELALQELNSY 206 (361)
Q Consensus 173 ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~~ 206 (361)
++...++.++...+.++...+++|.....+....
T Consensus 977 ~e~~~~~~~v~~L~~e~~~l~~~~~~~~ke~~~l 1010 (1080)
T 2dfs_A 977 EEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTI 1010 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555555555555555555544444443
No 42
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=24.47 E-value=3.6e+02 Score=23.67 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q psy5492 192 AKEKYELALQELNSYNPKYMEDMSVVFDKCQEME 225 (361)
Q Consensus 192 ak~eY~~~l~~ln~~r~~yeeeM~~~~d~~Q~lE 225 (361)
....+...|..+....+.++..-..++..++++|
T Consensus 103 ~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e 136 (189)
T 2v71_A 103 IKEQLHKYVRELEQANDDLERAKRATIMSLEDFE 136 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHH
Confidence 4455555566666666666666666666665555
No 43
>2cly_C ATP synthase coupling factor 6, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.45.1.1 PDB: 1vzs_A 2wss_V*
Probab=24.06 E-value=86 Score=23.82 Aligned_cols=32 Identities=6% Similarity=0.225 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHh
Q psy5492 63 LCNDLIALIQERA----------DIEKAYAKSLKGWNKKWNE 94 (361)
Q Consensus 63 ~ckeL~~flKERA----------~IEeeYAK~L~kLaKK~~~ 94 (361)
+++-|.+|=..++ ++|+++...|.+|++.|++
T Consensus 12 FldKIREYk~Ks~~~G~lVD~~Pe~~kel~~el~kL~~~YGg 53 (77)
T 2cly_C 12 FVDKIREYRTKRQTSGGPVDAGPEYQQDLDRELFKLKQMYGK 53 (77)
T ss_dssp HHHHHHHHHHHHTCCSSSSSCCTHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHHHCc
Confidence 5667777744443 3999999999999999975
No 44
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=22.49 E-value=4.4e+02 Score=23.93 Aligned_cols=67 Identities=9% Similarity=0.173 Sum_probs=31.0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy5492 123 EDAFKKAQKPWCKLLTKVNKTKNDYHVACKAERSASNQERNASADSSLSMDQLKKMQDRVQKAKEEVQKAK 193 (361)
Q Consensus 123 e~~~~KaqK~~~~~~~kl~KaKK~Y~~~Ckee~~a~~~e~~a~~d~~~s~ke~eKl~~K~~K~~~~~~kak 193 (361)
+..+..++..+......+..++..+..+-.+.+..+.... ....+..+++.++..+..++.++..++
T Consensus 68 ~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~----~~~~s~~~~~~a~~~~~~~~a~l~~~~ 134 (341)
T 3fpp_A 68 ENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQ----TQAVSQQDLDNAATEMAVKQAQIGTID 134 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH----TSSSTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444555555555554444222211111 124666777766655555444444333
No 45
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=21.62 E-value=4.3e+02 Score=23.55 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5492 173 DQLKKMQDRVQKAKEEVQKAKEKYELALQELNS 205 (361)
Q Consensus 173 ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~ 205 (361)
..+.+....+..+-..++..+..|...+..+=.
T Consensus 184 ~~~~~a~~~Y~~~v~~~n~~~~~~~~~~p~~~~ 216 (290)
T 3i2w_A 184 DQVQKCREKYEQAIAEITKYNSVYIEDMTSVFE 216 (290)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 445666677777777777777777766555533
No 46
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=21.62 E-value=1.7e+02 Score=23.01 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=29.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q psy5492 49 NYKRTTKRIEDGYKLCNDLIALIQERAD-IEKAYA 82 (361)
Q Consensus 49 Gy~~l~krik~G~~~ckeL~~flKERA~-IEeeYA 82 (361)
-|+.+.+.++.-...+.+.+.||+++.. +|+.|-
T Consensus 53 ~fe~l~s~l~~f~e~a~e~vp~L~~~i~vle~~~~ 87 (94)
T 3fx7_A 53 VLDNLKSTFNEFDEAAQEQIAWLKERIRVLEEDYL 87 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHhHHHHHHHHHhHHHHH
Confidence 6888999999999999999999999965 466663
No 47
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=20.54 E-value=55 Score=27.28 Aligned_cols=52 Identities=15% Similarity=0.053 Sum_probs=39.5
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy5492 42 DSFWEPGNYKRTTKRIEDGYKLCNDLIALIQERADIEKAYAKSLKGWNKKWNELIEK 98 (361)
Q Consensus 42 ~sFWg~~Gy~~l~krik~G~~~ckeL~~flKERA~IEeeYAK~L~kLaKK~~~~~e~ 98 (361)
.+..+..||+.....+++. +|..+|.+++.-...++..|+......++..+.
T Consensus 22 ~~~D~~~gY~~aae~~~d~-----~lk~~f~~~a~~~~~~~~eL~~~i~~lGg~p~~ 73 (153)
T 4etr_A 22 TSKDGEAGFHACAEDLRDP-----QLKAAMLEQSRDCAAAADELERIVLELGGKPKD 73 (153)
T ss_dssp HHHHHHHHHHHHHHTCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--
T ss_pred HhhHHHHHHHHHHHHCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 3344556788877777553 788999999999999999999999998765443
No 48
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=20.39 E-value=3e+02 Score=21.23 Aligned_cols=54 Identities=17% Similarity=0.259 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHH
Q psy5492 173 DQLKKMQDRVQKAKEEVQKAKEKYELALQELNS---YNPKYMEDMSVVFDKCQEMET 226 (361)
Q Consensus 173 ke~eKl~~K~~K~~~~~~kak~eY~~~l~~ln~---~r~~yeeeM~~~~d~~Q~lEe 226 (361)
.++.-++.|+...+.++.++...+..+...+.. ....-+.++...-.++|.+|+
T Consensus 44 ~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasLnRriqllEE 100 (101)
T 3u59_A 44 EEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQLVEE 100 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 344455566666666666666666555544433 334566777777778887775
Done!