BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5495
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29MA5|RM24_DROPS Probable 39S ribosomal protein L24, mitochondrial OS=Drosophila
pseudoobscura pseudoobscura GN=mRpL24 PE=3 SV=1
Length = 247
Score = 174 bits (442), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 119/176 (67%), Gaps = 6/176 (3%)
Query: 97 QVYHVYPKGPQYTVVDQGKDSDFDFSTDRPWEVPFLARNRPWEKNKKKIPIEPIKDWSIF 156
QVY P+ Y + + F ++T+RPW F +N P ++K+ IEP++DWS F
Sbjct: 28 QVYWQTPREKNY-LPRTVERKRFRYTTNRPWTGQFRQQNMP-ATMRRKVLIEPVEDWSFF 85
Query: 157 KGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLV 212
+GDR+E+LVGKDKGKQG V Q+ E N VIVEGLN + +++G + IIK EAPL V
Sbjct: 86 RGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRRVGAEKEFPGIIIKSEAPLHV 145
Query: 213 TNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPMAAYETHDYKTPGTY 268
N++ LVDPSD +G + EWR+TE G++VRVS RSGRIIPIP +THDYKTP Y
Sbjct: 146 LNDIRLVDPSDLLGTEFEWRFTEEGEKVRVSMRSGRIIPIPETNNQTHDYKTPNAY 201
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 60 DKDTKEQDVLAVTYQPKLSTFEMDIMEEHKIE 91
+KDT V +T+QPKLSTFEMDIMEE I+
Sbjct: 205 EKDTPAAVVGEITFQPKLSTFEMDIMEEMGIK 236
>sp|Q9VMY1|RM24_DROME Probable 39S ribosomal protein L24, mitochondrial OS=Drosophila
melanogaster GN=mRpL24 PE=1 SV=1
Length = 247
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 116/176 (65%), Gaps = 6/176 (3%)
Query: 97 QVYHVYPKGPQYTVVDQGKDSDFDFSTDRPWEVPFLARNRPWEKNKKKIPIEPIKDWSIF 156
QVY PK Y + + F ++T+R W F +N P ++K+ +EPI+DWS F
Sbjct: 28 QVYWQTPKEINY-LPRTVERKRFRYTTNRSWTGQFRQQNMP-GTVRRKVLVEPIEDWSFF 85
Query: 157 KGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLV 212
+GDR+E+LVGKDKGKQG V Q+ E N VIVEGLN + +K+G + IIK EAPL V
Sbjct: 86 RGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRKVGGEKEFPGIIIKSEAPLHV 145
Query: 213 TNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPMAAYETHDYKTPGTY 268
T ++ LVDPSD G EWR+TE G++VRVS RSGRIIPIP +THDYKTP Y
Sbjct: 146 TKDIRLVDPSDLQGTDFEWRFTEEGEKVRVSLRSGRIIPIPETNNQTHDYKTPNAY 201
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 60 DKDTKEQDVLAVTYQPKLSTFEMDIMEEHKIE 91
+KDT V +T+QPKLSTFEMDIMEE I+
Sbjct: 205 EKDTPGAVVGEITFQPKLSTFEMDIMEEMGIK 236
>sp|Q3SYS0|RM24_BOVIN 39S ribosomal protein L24, mitochondrial OS=Bos taurus GN=MRPL24
PE=1 SV=1
Length = 216
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 97/142 (68%), Gaps = 8/142 (5%)
Query: 118 DFDFSTDRPWEVPFLARNRPWEKNKKKIPIEPI--KDWSIFKGDRVEILVGKDKGKQGYV 175
++ + RP + +N P + ++++ +EPI +DW +F GDRVEIL GKD GKQG V
Sbjct: 18 NYRYGMSRPGSLADKKKNPPGTR-RRRVAVEPIPEEDWHLFCGDRVEILEGKDAGKQGKV 76
Query: 176 IQIFQEINSVIVEGLNTYLKKMGDS----QFIIKQEAPLLVTNEVALVDPSDRMGCQVEW 231
+Q+ ++ N V+VEGLNT+ + +G + ++ EAPLL N+V LVDP DR +VEW
Sbjct: 77 VQVIRQRNWVVVEGLNTHYRYVGKTVDFRGTMVPSEAPLL-HNQVKLVDPMDRKPTEVEW 135
Query: 232 RYTEAGDRVRVSKRSGRIIPIP 253
R+TEAG+RVRVS RSGRIIP P
Sbjct: 136 RFTEAGERVRVSTRSGRIIPKP 157
>sp|Q6DH02|RM24_DANRE Probable 39S ribosomal protein L24, mitochondrial OS=Danio rerio
GN=mrpl24 PE=2 SV=1
Length = 216
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 103/157 (65%), Gaps = 10/157 (6%)
Query: 119 FDFSTDRPWEVPFLARNRPWEKNKKKIPIEPI--KDWSIFKGDRVEILVGKDKGKQGYVI 176
+ + T+RPW + N P K ++K+ +EPI +DW + +GD VE+L GK+KGKQG V
Sbjct: 19 YRYGTNRPWTIAARRLNPP-GKRRRKVFVEPIANEDWPVVRGDTVEVLSGKEKGKQGKVA 77
Query: 177 QIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLVTNEVALVDPSDRMGCQVEWR 232
Q+ + N VI+EGLNT+ + +G S + EAPLL+ ++AL+DP+DR +++WR
Sbjct: 78 QVIRARNWVILEGLNTHYRYVGRSGDYRGTYLASEAPLLL-KDIALIDPTDRKPTEIQWR 136
Query: 233 YTEAGDRVRVSKRSGRIIPIPMAAYETHDYKTPGTYK 269
YTE G+RVRVS R+GRIIP P+ ++ D P +K
Sbjct: 137 YTEEGERVRVSVRTGRIIPKPV--FQRKDGIVPQQWK 171
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 61 KDTKEQDVLAVTYQPKLSTFEMDIMEEHKIE 91
KDT +D L TY P L T E ++ME+ I+
Sbjct: 175 KDTSPEDTLQKTYTPSLKTLEEEVMEKMNIQ 205
>sp|Q9CQ06|RM24_MOUSE 39S ribosomal protein L24, mitochondrial OS=Mus musculus GN=Mrpl24
PE=2 SV=1
Length = 216
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 96/141 (68%), Gaps = 8/141 (5%)
Query: 119 FDFSTDRPWEVPFLARNRPWEKNKKKIPIEPI--KDWSIFKGDRVEILVGKDKGKQGYVI 176
+ + RP + +N PW + ++ + +EPI +DW +F GD VEIL GKD GKQG V+
Sbjct: 19 YRYGMSRPGSIADKRKNPPWSR-RRPVVVEPISDEDWHLFCGDMVEILEGKDAGKQGKVV 77
Query: 177 QIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLVTNEVALVDPSDRMGCQVEWR 232
Q+ ++ N V++EGLNT+ + +G ++ +I EAPLL ++V LVDP DR +++WR
Sbjct: 78 QVVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIASEAPLL-HHQVKLVDPVDRKPTEIQWR 136
Query: 233 YTEAGDRVRVSKRSGRIIPIP 253
+TEAG+RVRVS RSGRIIP P
Sbjct: 137 FTEAGERVRVSTRSGRIIPKP 157
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 61 KDTKEQDVLAVTYQPKLSTFEMDIMEEHKIE 91
KDT +D L TY P+L T E D+ME I+
Sbjct: 175 KDTSVEDALERTYVPRLKTLEEDVMEAMGIQ 205
>sp|Q66H47|RM24_RAT 39S ribosomal protein L24, mitochondrial OS=Rattus norvegicus
GN=Mrpl24 PE=2 SV=1
Length = 216
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 96/141 (68%), Gaps = 8/141 (5%)
Query: 119 FDFSTDRPWEVPFLARNRPWEKNKKKIPIEPI--KDWSIFKGDRVEILVGKDKGKQGYVI 176
+ + RP + +N PW + ++ + +EPI +DW +F GD VEIL GKD GKQG V+
Sbjct: 19 YRYGMSRPGSIADKRKNPPWSR-RRPVVVEPISDEDWHLFCGDMVEILEGKDAGKQGKVV 77
Query: 177 QIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLVTNEVALVDPSDRMGCQVEWR 232
Q+ ++ N V++EGLNT+ + +G ++ +I EAPLL ++V LVDP DR +++WR
Sbjct: 78 QVVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIPSEAPLL-HHQVKLVDPVDRKPTEIQWR 136
Query: 233 YTEAGDRVRVSKRSGRIIPIP 253
+TEAG+RVRVS RSGRIIP P
Sbjct: 137 FTEAGERVRVSTRSGRIIPKP 157
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 61 KDTKEQDVLAVTYQPKLSTFEMDIMEEHKIE 91
KDT +D L TY P+L T E D+ME I+
Sbjct: 175 KDTSVEDALERTYVPRLKTLEEDVMEAMGIQ 205
>sp|Q6GPM4|RM24_XENLA Probable 39S ribosomal protein L24, mitochondrial OS=Xenopus laevis
GN=mrpl24 PE=2 SV=1
Length = 216
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 94/143 (65%), Gaps = 8/143 (5%)
Query: 118 DFDFSTDRPWEVPFLARNRPWEKNKKKIPIEPI--KDWSIFKGDRVEILVGKDKGKQGYV 175
D+ F RP + RN P K + K+ +EP+ ++W F+GD VE+L GKD GKQG V
Sbjct: 18 DYRFGMSRPSTLAAKRRNPP-GKRRSKVFVEPVSKEEWQYFRGDTVEVLHGKDAGKQGKV 76
Query: 176 IQIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLVTNEVALVDPSDRMGCQVEW 231
Q+ + N V+V+GLNT+ + +G + + E PLL+ N+V+L+DP+DR ++EW
Sbjct: 77 TQVVRARNWVVVDGLNTHFRYVGRTDEYRGTYVASEGPLLL-NQVSLIDPTDRKPTEIEW 135
Query: 232 RYTEAGDRVRVSKRSGRIIPIPM 254
RYTE G+RVRVS RSGRIIP P+
Sbjct: 136 RYTEEGERVRVSARSGRIIPKPV 158
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 61 KDTKEQDVLAVTYQPKLSTFEMDIMEEHKI 90
KDT +D L TY P L TF+ +IME+ I
Sbjct: 175 KDTSVEDALERTYVPSLKTFQEEIMEKTGI 204
>sp|Q96A35|RM24_HUMAN 39S ribosomal protein L24, mitochondrial OS=Homo sapiens GN=MRPL24
PE=1 SV=1
Length = 216
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 92/141 (65%), Gaps = 8/141 (5%)
Query: 119 FDFSTDRPWEVPFLARNRPWEKNKKKIPIEPI--KDWSIFKGDRVEILVGKDKGKQGYVI 176
+ + P V +N PW + ++ + +EPI +DW +F GD VEIL GKD GKQG V+
Sbjct: 19 YRYGMSPPGSVADKRKNPPWIR-RRPVVVEPISDEDWYLFCGDTVEILEGKDAGKQGKVV 77
Query: 177 QIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLVTNEVALVDPSDRMGCQVEWR 232
Q+ ++ N V+V GLNT+ + +G + +I EAPLL +V LVDP DR ++EWR
Sbjct: 78 QVIRQRNWVVVGGLNTHYRYIGKTMDYRGTMIPSEAPLL-HRQVKLVDPMDRKPTEIEWR 136
Query: 233 YTEAGDRVRVSKRSGRIIPIP 253
+TEAG+RVRVS RSGRIIP P
Sbjct: 137 FTEAGERVRVSTRSGRIIPKP 157
>sp|Q61DH4|RM24_CAEBR Probable 39S ribosomal protein L24, mitochondrial OS=Caenorhabditis
briggsae GN=CBG12482 PE=3 SV=1
Length = 278
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 94/174 (54%), Gaps = 23/174 (13%)
Query: 118 DFDFSTDRPWEVPFLAR--------------NRPWEKNKKKIPIEPIKDWSIFKGDRVEI 163
D+ S RPWE L+ N+ +E + K P +W+ F GD V++
Sbjct: 58 DYLPSHRRPWEDKQLSSHLQRSDKYFSAQLSNKYFELRRPKSERMPDTEWTFFPGDLVQV 117
Query: 164 LVGKDKGKQGYVIQIFQEINSVIVEGLNTYL-------KKMGDSQFIIKQEAPLLVT-NE 215
+VGKDKG+QG V+ I ++ + V+V+GL+T L +K+G + + QE PL V+ +
Sbjct: 118 MVGKDKGRQGLVLTISRDSSEVVVDGLHTRLGEDMEGSEKLGVDKTLRWQEQPLSVSKKQ 177
Query: 216 VALVDPSDRMGCQVEWRYTEAGDR-VRVSKRSGRIIPIPMAAYETHDYKTPGTY 268
V LVDP+D C+ W+ + D +RVS RSG IPIP A T++Y P Y
Sbjct: 178 VMLVDPNDENPCEARWQLNASADEYIRVSTRSGYEIPIPSQAKVTYEYLQPENY 231
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 56 IENEDKDTKEQDVLAVTYQPKLSTFEMDIMEEHKIE 91
IE E KDT VL TY P++++FE +IMEE I+
Sbjct: 232 IEVEGKDTPSDAVLERTYMPRVASFEQEIMEEMGIK 267
>sp|P91353|RM24_CAEEL Probable 39S ribosomal protein L24, mitochondrial OS=Caenorhabditis
elegans GN=F59A3.3 PE=1 SV=1
Length = 278
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 9/126 (7%)
Query: 152 DWSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYL-------KKMGDSQFII 204
+W+ F GD V+++VGKDKG+QG V+ ++ + VIV+GL+T L +K+G + +
Sbjct: 106 EWTFFPGDLVQVMVGKDKGRQGLVLTTSRDSSDVIVDGLHTKLGEDMEGSEKLGVDKTLR 165
Query: 205 KQEAPLLVT-NEVALVDPSDRMGCQVEWRYTEAGDR-VRVSKRSGRIIPIPMAAYETHDY 262
QE PL V+ +V LVDP+D C+ W+ GD +RVS RSG IPIP A T++Y
Sbjct: 166 WQEQPLSVSKKQVMLVDPNDEQPCEARWQLNGPGDEYIRVSTRSGYEIPIPSQAKVTYEY 225
Query: 263 KTPGTY 268
P Y
Sbjct: 226 LQPENY 231
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 56 IENEDKDTKEQDVLAVTYQPKLSTFEMDIMEEHKIE 91
IE E KDT VL TY PK+++FE +IMEE I+
Sbjct: 232 IEVEGKDTPADAVLERTYMPKVASFEQEIMEEMGIK 267
>sp|Q0RRR0|RL24_FRAAA 50S ribosomal protein L24 OS=Frankia alni (strain ACN14a) GN=rplX
PE=3 SV=1
Length = 110
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 9/106 (8%)
Query: 150 IKDWSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLK--------KMGDSQ 201
+ I KGD V+I+ GKD+G +G VI+ + E N V+VEG N + + S
Sbjct: 3 VATLKIKKGDTVQIITGKDRGLKGKVIRAYPEQNKVLVEGANRITRHTRVQQSARGSQSG 62
Query: 202 FIIKQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSG 247
I+ QEAP+ V+N V +VDPSD ++ +R E G +VR+S+R+G
Sbjct: 63 GIVTQEAPIHVSN-VMIVDPSDGRPTRIGYRINEDGTKVRISRRTG 107
>sp|Q2JFG5|RL24_FRASC 50S ribosomal protein L24 OS=Frankia sp. (strain CcI3) GN=rplX PE=3
SV=1
Length = 108
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLK--------KMGDSQFII 204
I KGD V+I+ GKD+G +G VI+ + E N V+VEG N + + S II
Sbjct: 4 LKIKKGDTVQIITGKDRGLKGKVIRAYPEQNKVLVEGANRITRHTRVQQGTRGSQSGGII 63
Query: 205 KQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSG 247
QEAP+ V+N V +VDPSD ++ +R + G +VRVS+R+G
Sbjct: 64 TQEAPIHVSN-VMIVDPSDGKPTRIGYRINDDGTKVRVSRRTG 105
>sp|A8LC45|RL24_FRASN 50S ribosomal protein L24 OS=Frankia sp. (strain EAN1pec) GN=rplX
PE=3 SV=1
Length = 108
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLK--------KMGDSQFII 204
I KGD V+I+ GKD+G +G VI+ + N V+VEG N + + S I+
Sbjct: 4 MKIKKGDTVQIVTGKDRGLKGKVIRAIPDQNKVVVEGANRVTRHTRVQQSSRGSQSGGIV 63
Query: 205 KQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSG 247
QEAP+ V+N V +VDPSD +V +R+ + G +VR+S+R+G
Sbjct: 64 TQEAPIHVSN-VMIVDPSDGRPTRVGYRFNDDGTKVRISRRTG 105
>sp|B7GJ78|RL24_ANOFW 50S ribosomal protein L24 OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=rplX PE=3 SV=1
Length = 103
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N V+VEG+N K + SQ II QE
Sbjct: 1 MHVKKGDKVQVISGKDKGKQGVILAAFPKKNRVLVEGVNIVKKHVKPSQANPQGGIINQE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N + L DP + +V ++ + G +VR +KRSG I+
Sbjct: 61 APIHVSNVMPL-DPKTGLPTRVGYKVVD-GKKVRYAKRSGEIL 101
>sp|Q6HPP7|RL24_BACHK 50S ribosomal protein L24 OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=rplX PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|Q63H79|RL24_BACCZ 50S ribosomal protein L24 OS=Bacillus cereus (strain ZK / E33L)
GN=rplX PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|Q81J31|RL24_BACCR 50S ribosomal protein L24 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=rplX PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|B9IZK5|RL24_BACCQ 50S ribosomal protein L24 OS=Bacillus cereus (strain Q1) GN=rplX
PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|B7HQV5|RL24_BACC7 50S ribosomal protein L24 OS=Bacillus cereus (strain AH187) GN=rplX
PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|B7HJ59|RL24_BACC4 50S ribosomal protein L24 OS=Bacillus cereus (strain B4264) GN=rplX
PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|C1ET50|RL24_BACC3 50S ribosomal protein L24 OS=Bacillus cereus (strain 03BB102)
GN=rplX PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|B7IT30|RL24_BACC2 50S ribosomal protein L24 OS=Bacillus cereus (strain G9842) GN=rplX
PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|Q73F85|RL24_BACC1 50S ribosomal protein L24 OS=Bacillus cereus (strain ATCC 10987)
GN=rplX PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|B7JKD0|RL24_BACC0 50S ribosomal protein L24 OS=Bacillus cereus (strain AH820) GN=rplX
PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|Q81VR9|RL24_BACAN 50S ribosomal protein L24 OS=Bacillus anthracis GN=rplX PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|A0R8J1|RL24_BACAH 50S ribosomal protein L24 OS=Bacillus thuringiensis (strain Al
Hakam) GN=rplX PE=3 SV=2
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|C3LJ93|RL24_BACAC 50S ribosomal protein L24 OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=rplX PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|C3P9R6|RL24_BACAA 50S ribosomal protein L24 OS=Bacillus anthracis (strain A0248)
GN=rplX PE=3 SV=1
Length = 103
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|A9VP88|RL24_BACWK 50S ribosomal protein L24 OS=Bacillus weihenstephanensis (strain
KBAB4) GN=rplX PE=3 SV=1
Length = 103
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V ++DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSN-VMVLDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101
>sp|B3CT16|RL24_ORITI 50S ribosomal protein L24 OS=Orientia tsutsugamushi (strain Ikeda)
GN=rplX PE=3 SV=1
Length = 105
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Query: 158 GDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLK-----KMGDSQFIIKQEAPLLV 212
GD+V+++ GKDKGK+G VI++ ++ VIV+G+N K K G S II +E P+ +
Sbjct: 9 GDQVQVITGKDKGKRGIVIKVLANLSKVIVKGINLAQKHVKANKNGVSGGIISKELPIHI 68
Query: 213 TNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
+N VA VD S + ++ + + +VR+SKRSG I+
Sbjct: 69 SN-VAYVDSSSNLITKITYTKLDGKRKVRISKRSGEIL 105
>sp|Q5WLQ1|RL24_BACSK 50S ribosomal protein L24 OS=Bacillus clausii (strain KSM-K16)
GN=rplX PE=3 SV=1
Length = 102
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ-----FIIKQE 207
+ KGD+V ++ GKDKGKQG V++ + + + V+VEG+N K SQ I+ QE
Sbjct: 1 MHVKKGDKVVVITGKDKGKQGTVLEAYPKKSRVLVEGVNMVKKHAKPSQDNPQGGILNQE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ +N V LVDP +V ++ E G +VRV+K+SG II
Sbjct: 61 APIHSSN-VMLVDPKTGERTRVGYK-EENGKKVRVAKKSGEII 101
>sp|A7GK31|RL24_BACCN 50S ribosomal protein L24 OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=rplX PE=3 SV=1
Length = 103
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVITGKDKGKQGVILVAFPKENRVIVEGVNIVKKHSKPSQLNPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N + L DP +V ++ E G +VR++K+SG ++
Sbjct: 61 APIHVSNVMPL-DPKTGEPTRVGYK-VEDGKKVRIAKKSGELL 101
>sp|Q5Z1S1|RL24_NOCFA 50S ribosomal protein L24 OS=Nocardia farcinica (strain IFM 10152)
GN=rplX PE=3 SV=1
Length = 104
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ--------FII 204
+ KGD V ++ GKDKG +G VIQ + + N V+VEG+N K + +S I+
Sbjct: 1 MKVHKGDTVLVISGKDKGAKGKVIQAYPKENRVLVEGVNRIKKHVANSANQRGASSGGIV 60
Query: 205 KQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
QEAP+ V+N V +VD SD ++ +R E G RVR+S+R+G+ I
Sbjct: 61 TQEAPIHVSN-VMVVD-SDGKPTRIGYRTDENGKRVRISRRNGKDI 104
>sp|Q98N46|RL24_RHILO 50S ribosomal protein L24 OS=Rhizobium loti (strain MAFF303099)
GN=rplX PE=3 SV=1
Length = 104
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF----IIKQEAPL 210
I KGD+V +L GKDKG+ G V+ + + ++ +V G+N + SQ II +EAP+
Sbjct: 4 IRKGDKVVVLAGKDKGRSGEVLSVQPKDDTALVRGVNMIRRHQKQSQSQEGGIITKEAPI 63
Query: 211 LVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
++N +AL DP D +V + + + G +VRV+KRSG +I
Sbjct: 64 QLSN-IALADPKDGKPTRVGFIFQKDGKKVRVAKRSGEVI 102
>sp|Q1AU40|RL24_RUBXD 50S ribosomal protein L24 OS=Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129) GN=rplX PE=3 SV=2
Length = 105
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPL 210
I +GD V ++ G++KGK+G V ++ N V+V+G+NT + SQ + + +AP+
Sbjct: 5 IKRGDTVVVISGREKGKRGEVERVLPRENRVVVKGVNTRTRHARPSQQNPDGLYRFDAPI 64
Query: 211 LVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
++N V LVDP+ +V +R+TE+G +VRV+KRSG+ I
Sbjct: 65 HISN-VMLVDPNTGEPTRVGYRFTESGQKVRVAKRSGKDI 103
>sp|Q0S3G5|RL24_RHOSR 50S ribosomal protein L24 OS=Rhodococcus sp. (strain RHA1) GN=rplX
PE=3 SV=1
Length = 105
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 11/105 (10%)
Query: 155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLK--------KMGDSQFIIKQ 206
+ KGD V ++ GKDKG +G VIQ + N V+VEG+N K + S I+ Q
Sbjct: 3 VHKGDTVLVIAGKDKGAKGKVIQAYPATNKVLVEGVNRIKKHTAVSANERGASSGGIVTQ 62
Query: 207 EAPLLVTNEVALVDPSDRMGCQVEWRY-TEAGDRVRVSKRSGRII 250
EAP+ V+N VA+VD SD +V +R E+G RVR+S+++G+ I
Sbjct: 63 EAPIHVSN-VAVVD-SDGNPTRVGYRTDEESGKRVRISRKNGKDI 105
>sp|C5D3S8|RL24_GEOSW 50S ribosomal protein L24 OS=Geobacillus sp. (strain WCH70) GN=rplX
PE=3 SV=1
Length = 103
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG ++ F + N VIVEG+N K SQ II +E
Sbjct: 1 MHVKKGDKVQVISGKDKGKQGVILAAFPKKNRVIVEGVNIVKKHAKPSQANPQGGIITKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+ +V +DP + ++ ++ + G +VR +KRSG I+
Sbjct: 61 APIHVS-KVMPLDPKTGLPTRIGYKIVD-GKKVRYAKRSGEIL 101
>sp|B1HMW9|RL24_LYSSC 50S ribosomal protein L24 OS=Lysinibacillus sphaericus (strain
C3-41) GN=rplX PE=3 SV=1
Length = 102
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGK+G ++ F + + V+VEG+N K + +Q I+ QE
Sbjct: 1 MHVKKGDKVKVITGKDKGKEGVILAAFPKQDRVLVEGVNIVKKHVKPNQLNPQGGIVSQE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
A + V+N V L+DP +V ++ E G +VRV+K+SG +I
Sbjct: 61 AAIHVSN-VMLIDPKSGEPTRVGYKI-ENGKKVRVAKKSGAVI 101
>sp|P60739|RL24_CORDI 50S ribosomal protein L24 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=rplX PE=3
SV=1
Length = 104
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ--------FII 204
I KGD V ++ G DKG +G VIQ F + V+VEG+N K + +S I+
Sbjct: 1 MKIHKGDMVLVISGPDKGAKGKVIQAFPKTEKVLVEGVNRIKKHVANSAPERGAESGGIV 60
Query: 205 KQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
QEAP+ V+N +V SD +V +R+ E G +VR+S+R+G+ I
Sbjct: 61 TQEAPIHVSN--VMVLDSDGNPTRVGYRFDENGKKVRISRRNGKDI 104
>sp|Q839F3|RL24_ENTFA 50S ribosomal protein L24 OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=rplX PE=3 SV=1
Length = 103
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 65/101 (64%), Gaps = 7/101 (6%)
Query: 155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQEAP 209
+ KGD+V+++ GKDK K+G V+ F + + VIVEG+N K +Q I++ EAP
Sbjct: 3 VKKGDKVKVITGKDKNKEGVVLAAFPKQDKVIVEGVNVVKKHQKPNQAAPQGGILEVEAP 62
Query: 210 LLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
+ V+N V ++DPS+ +V ++ + G +VRVSK++G ++
Sbjct: 63 IHVSN-VMVIDPSNGEATKVAFKEVD-GKKVRVSKKTGEVL 101
>sp|Q1WSA1|RL24_LACS1 50S ribosomal protein L24 OS=Lactobacillus salivarius (strain
UCC118) GN=rplX PE=3 SV=1
Length = 101
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Query: 155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQEAP 209
I K D+V+++ GKDKGK+G V ++F + VIV+G+N K + I++ EAP
Sbjct: 3 IKKNDKVKVIAGKDKGKEGTVEKVFPAQDRVIVKGINIVKKHQKPTNANPNGGIVEVEAP 62
Query: 210 LLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
+ V+N V L+DPS+ +V ++ + G +VRVSK+SG I+
Sbjct: 63 IHVSN-VMLIDPSNNEATRVGFKVVD-GKKVRVSKKSGEIL 101
>sp|B1YGW1|RL24_EXIS2 50S ribosomal protein L24 OS=Exiguobacterium sibiricum (strain DSM
17290 / JCM 13490 / 255-15) GN=rplX PE=3 SV=1
Length = 103
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V+++ GKDKGKQG V+ + + VIVEG+N K SQ I+++E
Sbjct: 1 MHVKKGDKVQVMTGKDKGKQGVVLTAMPKKDRVIVEGVNMIKKHSKPSQLNPQGGIVEKE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N V L+DP +V + + G +VR++K+SG +
Sbjct: 61 APIHVSN-VMLIDPKTGNPTRVGFTVVD-GKKVRIAKKSGEAL 101
>sp|A5CCK1|RL24_ORITB 50S ribosomal protein L24 OS=Orientia tsutsugamushi (strain
Boryong) GN=rplX PE=3 SV=1
Length = 106
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 158 GDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLK-----KMGDSQFIIKQEAPLLV 212
GD+V+++ GKDKGK+G VI++ ++ VIV+G+N K K S II +E P+ +
Sbjct: 9 GDKVQVITGKDKGKRGIVIKVLASLSRVIVKGINLARKHVKANKNDVSGGIINKELPIHI 68
Query: 213 TNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
+N VA VD S + ++ + + +VRVSKRSG I+
Sbjct: 69 SN-VAYVDSSSNLITKITYTKLDDKRKVRVSKRSGEIL 105
>sp|Q2W2K2|RL24_MAGSA 50S ribosomal protein L24 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rplX PE=3 SV=1
Length = 106
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLN---TYLKKMGDSQ-FIIKQEA 208
++ KGDRV +L GKDKGK+G VI VIV+G+N + + SQ I+++EA
Sbjct: 4 MNVKKGDRVVVLAGKDKGKKGEVIAAMPSEQRVIVQGVNLVKRHTRPSATSQGGIVEKEA 63
Query: 209 PLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
+ V+N VA DP D ++ + E G +VRV++RSG +I
Sbjct: 64 SIHVSN-VAHEDPKDGKATRIGHKILEDGRKVRVARRSGEVI 104
>sp|Q65P96|RL24_BACLD 50S ribosomal protein L24 OS=Bacillus licheniformis (strain DSM 13
/ ATCC 14580) GN=rplX PE=3 SV=1
Length = 103
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQE 207
+ KGD+V ++ GKDKGKQG ++ F + + VIVEG+N K +Q I+ QE
Sbjct: 1 MHVKKGDKVMVISGKDKGKQGVILAAFPKKDRVIVEGVNMVKKHSKPTQANPQGGILNQE 60
Query: 208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
AP+ V+N + L DP +V ++ E G +VR++K+SG+++
Sbjct: 61 APIHVSNVMPL-DPKTGEVTRVGYK-VENGKKVRIAKKSGQVL 101
>sp|A9IW12|RL24_BART1 50S ribosomal protein L24 OS=Bartonella tribocorum (strain CIP
105476 / IBS 506) GN=rplX PE=3 SV=1
Length = 104
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPL 210
I KGD+V +L GKDKG G VI++ + N V G+N + +Q II +EAP+
Sbjct: 4 IRKGDKVVVLSGKDKGCSGEVIKVSPKENKAFVRGINMVKRHQRQTQKQEAGIISKEAPV 63
Query: 211 LVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
++N +A+ DP D +V +R G++VR +KRSG +I
Sbjct: 64 HLSN-LAIADPKDGKPTRVGFRMNADGNKVRFAKRSGELI 102
>sp|Q8NSZ3|RL24_CORGL 50S ribosomal protein L24 OS=Corynebacterium glutamicum (strain
ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB
10025) GN=rplX PE=3 SV=1
Length = 104
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ--------FII 204
+ KGD V ++ G DKG +G VI F + V+VEG+N K + +S I+
Sbjct: 1 MKVHKGDMVLVISGPDKGAKGQVIAAFPKTEKVLVEGVNRIKKHVANSAPERGAESGGIV 60
Query: 205 KQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
QEAP+ V+N V ++D SD +V +R+ E G +VRVS+R+G+ I
Sbjct: 61 TQEAPIHVSN-VMVID-SDGNPTRVGYRFDENGKKVRVSRRNGKDI 104
>sp|A4QBJ5|RL24_CORGB 50S ribosomal protein L24 OS=Corynebacterium glutamicum (strain R)
GN=rplX PE=3 SV=1
Length = 104
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ--------FII 204
+ KGD V ++ G DKG +G VI F + V+VEG+N K + +S I+
Sbjct: 1 MKVHKGDMVLVISGPDKGAKGQVIAAFPKTEKVLVEGVNRIKKHVANSAPERGAESGGIV 60
Query: 205 KQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
QEAP+ V+N V ++D SD +V +R+ E G +VRVS+R+G+ I
Sbjct: 61 TQEAPIHVSN-VMVID-SDGNPTRVGYRFDENGKKVRVSRRNGKDI 104
>sp|A4FPL4|RL24_SACEN 50S ribosomal protein L24 OS=Saccharopolyspora erythraea (strain
NRRL 23338) GN=rplX PE=3 SV=1
Length = 104
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLK--------KMGDSQFII 204
+ KGD V ++ GKDKG +G VIQ F + + V+VEG+N K + S I+
Sbjct: 1 MKVKKGDTVVVISGKDKGAKGKVIQAFPQRDKVLVEGVNRIKKHTKVSRTERGAQSGGIV 60
Query: 205 KQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
QEAP+ V+N V +VD SD +V +R E G +VR+S+R+G+ I
Sbjct: 61 TQEAPIHVSN-VMVVD-SDGQPTRVGYRIGEDGKKVRISRRNGKDI 104
>sp|Q11HR3|RL24_MESSB 50S ribosomal protein L24 OS=Mesorhizobium sp. (strain BNC1)
GN=rplX PE=3 SV=1
Length = 104
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDS----QFIIKQEA 208
I KGD+V +L G+DKG+ G V+++ + + +V G+N + + II +EA
Sbjct: 2 QKIKKGDKVVVLSGRDKGRTGEVLKMMPKEDRALVRGVNLVRRHQKQTPQAEGGIITKEA 61
Query: 209 PLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
P+ V+N +AL DP D +V ++ E G +VRV+KRSG +I
Sbjct: 62 PIHVSN-LALADPKDGKPTRVGFKIQEDGKKVRVAKRSGELI 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,627,343
Number of Sequences: 539616
Number of extensions: 4888314
Number of successful extensions: 11956
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 231
Number of HSP's that attempted gapping in prelim test: 11105
Number of HSP's gapped (non-prelim): 844
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)