AmiGO: BLAST Results


BLAST match view associations BLAST with mRpL24 mRpL24 mRpL24 Probable 39S ribosomal protein L24, mitochondrial	protein from Drosophila pseudoobscura pseudoobscura	4.8e-39
BLAST match view associations BLAST with mRpL24 mRpL24 mRpL24 mitochondrial ribosomal protein L24	protein from Drosophila melanogaster	5.5e-38
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 39S ribosomal protein L24, mitochondrial	protein from Bos taurus	7.3e-27
BLAST match view associations BLAST with mrpl24 mrpl24 mrpl24 mitochondrial ribosomal protein L24	gene_product from Danio rerio	1.9e-26
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 Uncharacterized protein	protein from Sus scrofa	2.5e-26
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 Uncharacterized protein	protein from Canis lupus familiaris	4.0e-26
BLAST match view associations BLAST with Mrpl24 Mrpl24 Mrpl24 mitochondrial ribosomal protein L24	protein from Mus musculus	5.2e-26
BLAST match view associations BLAST with mrpl24 mrpl24 mrpl24 mitochondrial ribosomal protein L24	gene from Rattus norvegicus	5.2e-26
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 39S ribosomal protein L24, mitochondrial	protein from Homo sapiens	3.6e-25
BLAST match view associations BLAST with mrpl-24 mrpl-24 mrpl-24	gene from Caenorhabditis elegans	1.7e-20
BLAST match view associations BLAST with BA_0121 BA_0121 BA_0121 ribosomal protein L24	protein from Bacillus anthracis str. Ames	1.0e-13
BLAST match view associations BLAST with AT5G23535 AT5G23535 AT5G23535	protein from Arabidopsis thaliana	7.1e-13
BLAST match view associations BLAST with PFF0245w PFF0245w PFF0245w 50S ribosomal subunit L24, putative	gene from Plasmodium falciparum	6.0e-12
BLAST match view associations BLAST with PFF0245w PFF0245w PFF0245w Mitochondrial ribosomal protein L24, putative	protein from Plasmodium falciparum 3D7	6.0e-12
BLAST match view associations BLAST with DDB_G0269640 DDB_G0269640 DDB_G0269640 39S ribosomal protein L24, mitochondrial	gene from Dictyostelium discoideum	1.4e-11
BLAST match view associations BLAST with rplX rplX rplX 50S ribosomal protein L24	protein from Mycobacterium tuberculosis	1.8e-11
BLAST match view associations BLAST with PFL1150c PFL1150c PFL1150c ribosomal protein L24, putative	gene from Plasmodium falciparum	9.7e-10
BLAST match view associations BLAST with PFL1150c PFL1150c PFL1150c Mitochondrial ribosomal protein L24-2, putative	protein from Plasmodium falciparum 3D7	9.7e-10
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 Uncharacterized protein	protein from Gallus gallus	2.9e-09
BLAST match view associations BLAST with CHY_2298 CHY_2298 CHY_2298 ribosomal protein L24	protein from Carboxydothermus hydrogenoformans Z-2901	1.1e-08
BLAST match view associations BLAST with CBU_0249 CBU_0249 CBU_0249 ribosomal protein L24	protein from Coxiella burnetii RSA 493	1.9e-07
BLAST match view associations BLAST with GSU_2846 GSU_2846 GSU_2846 ribosomal protein L24	protein from Geobacter sulfurreducens PCA	3.2e-07
BLAST match view associations BLAST with ECH_0420 ECH_0420 ECH_0420 ribosomal protein L24	protein from Ehrlichia chaffeensis str. Arkansas	5.3e-07
BLAST match view associations BLAST with SO_0242 SO_0242 SO_0242 ribosomal protein L24	protein from Shewanella oneidensis MR-1	5.3e-07
BLAST match view associations BLAST with rplX rplX rplX 50S ribosomal protein L24	protein from Vibrio cholerae O1 biovar El Tor str. N16961	8.9e-07
BLAST match view associations BLAST with VC_2585 VC_2585 VC_2585 ribosomal protein L24	protein from Vibrio cholerae O1 biovar El Tor	8.9e-07
BLAST match view associations BLAST with SPO_0496 SPO_0496 SPO_0496 ribosomal protein L24	protein from Ruegeria pomeroyi DSS-3	1.9e-06
BLAST match view associations BLAST with DET_0485 DET_0485 DET_0485 ribosomal protein L24	protein from Dehalococcoides ethenogenes 195	4.2e-06
BLAST match view associations BLAST with rplX rplX rplX 50S ribosomal subunit protein L24	protein from Escherichia coli K-12	1.5e-05
BLAST match view associations BLAST with RPL24 RPL24 RPL24 AT5G54600	protein from Arabidopsis thaliana	3.5e-05
BLAST match view associations BLAST with CJE_1864 CJE_1864 CJE_1864 ribosomal protein L24	protein from Campylobacter jejuni RM1221	0.00041

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy5495
        (273 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q29MA5 - symbol:mRpL24 "Probable 39S ribosomal ...   417  4.8e-39   1
FB|FBgn0031651 - symbol:mRpL24 "mitochondrial ribosomal p...   407  5.5e-38   1
UNIPROTKB|Q3SYS0 - symbol:MRPL24 "39S ribosomal protein L...   302  7.3e-27   1
ZFIN|ZDB-GENE-040718-98 - symbol:mrpl24 "mitochondrial ri...   298  1.9e-26   1
UNIPROTKB|F1RHJ1 - symbol:MRPL24 "Uncharacterized protein...   297  2.5e-26   1
UNIPROTKB|E2QS97 - symbol:MRPL24 "Uncharacterized protein...   295  4.0e-26   1
MGI|MGI:1914957 - symbol:Mrpl24 "mitochondrial ribosomal ...   294  5.2e-26   1
RGD|1359289 - symbol:mrpl24 "mitochondrial ribosomal prot...   294  5.2e-26   1
UNIPROTKB|Q96A35 - symbol:MRPL24 "39S ribosomal protein L...   286  3.6e-25   1
WB|WBGene00019076 - symbol:mrpl-24 species:6239 "Caenorha...   242  1.7e-20   1
TIGR_CMR|BA_0121 - symbol:BA_0121 "ribosomal protein L24"...   178  1.0e-13   1
TAIR|locus:504954880 - symbol:AT5G23535 species:3702 "Ara...   170  7.1e-13   1
GENEDB_PFALCIPARUM|PFF0245w - symbol:PFF0245w "50S riboso...   162  6.0e-12   1
UNIPROTKB|C6KSP8 - symbol:PFF0245w "Mitochondrial ribosom...   162  6.0e-12   1
DICTYBASE|DDB_G0269640 - symbol:DDB_G0269640 "39S ribosom...   159  1.4e-11   1
UNIPROTKB|P60627 - symbol:rplX "50S ribosomal protein L24...   158  1.8e-11   1
GENEDB_PFALCIPARUM|PFL1150c - symbol:PFL1150c "ribosomal ...   154  9.7e-10   1
UNIPROTKB|Q8I5H8 - symbol:PFL1150c "Mitochondrial ribosom...   154  9.7e-10   1
UNIPROTKB|H9KZY7 - symbol:MRPL24 "Uncharacterized protein...   139  2.9e-09   1
TIGR_CMR|CHY_2298 - symbol:CHY_2298 "ribosomal protein L2...   134  1.1e-08   1
TIGR_CMR|CBU_0249 - symbol:CBU_0249 "ribosomal protein L2...   123  1.9e-07   1
TIGR_CMR|GSU_2846 - symbol:GSU_2846 "ribosomal protein L2...   121  3.2e-07   1
TIGR_CMR|ECH_0420 - symbol:ECH_0420 "ribosomal protein L2...   119  5.3e-07   1
TIGR_CMR|SO_0242 - symbol:SO_0242 "ribosomal protein L24"...   119  5.3e-07   1
UNIPROTKB|Q9KNZ5 - symbol:rplX "50S ribosomal protein L24...   117  8.9e-07   1
TIGR_CMR|VC_2585 - symbol:VC_2585 "ribosomal protein L24"...   117  8.9e-07   1
TIGR_CMR|SPO_0496 - symbol:SPO_0496 "ribosomal protein L2...   114  1.9e-06   1
TIGR_CMR|DET_0485 - symbol:DET_0485 "ribosomal protein L2...   111  4.2e-06   1
UNIPROTKB|P60624 - symbol:rplX "50S ribosomal subunit pro...   106  1.5e-05   1
TAIR|locus:2172154 - symbol:RPL24 "plastid ribosomal prot...   117  3.5e-05   1
TIGR_CMR|CJE_1864 - symbol:CJE_1864 "ribosomal protein L2...    93  0.00041   1


>UNIPROTKB|Q29MA5 [details] [associations]
            symbol:mRpL24 "Probable 39S ribosomal protein L24,
            mitochondrial" species:46245 "Drosophila pseudoobscura
            pseudoobscura" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR003256
            InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 GO:GO:0005739
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH379060
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
            PANTHER:PTHR12903 TIGRFAMs:TIGR01079 OrthoDB:EOG405QH6
            RefSeq:XP_001356724.1 ProteinModelPortal:Q29MA5 GeneID:4817158
            KEGG:dpo:Dpse_GA21365 FlyBase:FBgn0081353 InParanoid:Q29MA5
            OMA:RTPAKSY Uniprot:Q29MA5
        Length = 247

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 88/178 (49%), Positives = 114/178 (64%)

Query:    97 QVYHVYPKGPQYT--VVDQGKDSDFDFSTDRPWEVPFLARNRPWXXXXXXXXXXXXXDWS 154
             QVY   P+   Y    V++ +   F ++T+RPW   F  +N P              DWS
Sbjct:    28 QVYWQTPREKNYLPRTVERKR---FRYTTNRPWTGQFRQQNMP-ATMRRKVLIEPVEDWS 83

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMG-DSQF---IIKQEAPL 210
              F+GDR+E+LVGKDKGKQG V Q+  E N VIVEGLN + +++G + +F   IIK EAPL
Sbjct:    84 FFRGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRRVGAEKEFPGIIIKSEAPL 143

Query:   211 LVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPMAAYETHDYKTPGTY 268
              V N++ LVDPSD +G + EWR+TE G++VRVS RSGRIIPIP    +THDYKTP  Y
Sbjct:   144 HVLNDIRLVDPSDLLGTEFEWRFTEEGEKVRVSMRSGRIIPIPETNNQTHDYKTPNAY 201


>FB|FBgn0031651 [details] [associations]
            symbol:mRpL24 "mitochondrial ribosomal protein L24"
            species:7227 "Drosophila melanogaster" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=IEA;ISS] [GO:0005762 "mitochondrial large ribosomal
            subunit" evidence=ISS] [GO:0005840 "ribosome" evidence=IEA]
            InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
            EMBL:AE014134 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
            PANTHER:PTHR12903 TIGRFAMs:TIGR01079 CTD:79590
            GeneTree:ENSGT00390000014542 HSSP:Q9RXJ1 EMBL:AY095024
            RefSeq:NP_523476.1 UniGene:Dm.301 ProteinModelPortal:Q9VMY1
            SMR:Q9VMY1 IntAct:Q9VMY1 MINT:MINT-853395 STRING:Q9VMY1
            PaxDb:Q9VMY1 PRIDE:Q9VMY1 EnsemblMetazoa:FBtr0079058 GeneID:33703
            KEGG:dme:Dmel_CG8849 FlyBase:FBgn0031651 InParanoid:Q9VMY1
            OMA:GERKWRD OrthoDB:EOG405QH6 PhylomeDB:Q9VMY1 GenomeRNAi:33703
            NextBio:784866 Bgee:Q9VMY1 Uniprot:Q9VMY1
        Length = 247

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 89/178 (50%), Positives = 111/178 (62%)

Query:    97 QVYHVYPKGPQYT--VVDQGKDSDFDFSTDRPWEVPFLARNRPWXXXXXXXXXXXXXDWS 154
             QVY   PK   Y    V++ +   F ++T+R W   F  +N P              DWS
Sbjct:    28 QVYWQTPKEINYLPRTVERKR---FRYTTNRSWTGQFRQQNMP-GTVRRKVLVEPIEDWS 83

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMG-DSQF---IIKQEAPL 210
              F+GDR+E+LVGKDKGKQG V Q+  E N VIVEGLN + +K+G + +F   IIK EAPL
Sbjct:    84 FFRGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRKVGGEKEFPGIIIKSEAPL 143

Query:   211 LVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPMAAYETHDYKTPGTY 268
              VT ++ LVDPSD  G   EWR+TE G++VRVS RSGRIIPIP    +THDYKTP  Y
Sbjct:   144 HVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRVSLRSGRIIPIPETNNQTHDYKTPNAY 201


>UNIPROTKB|Q3SYS0 [details] [associations]
            symbol:MRPL24 "39S ribosomal protein L24, mitochondrial"
            species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
            Pfam:PF00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 PANTHER:PTHR12903 TIGRFAMs:TIGR01079 PDB:2FTC
            PDBsum:2FTC EMBL:BC103424 IPI:IPI00691136 RefSeq:NP_001029748.1
            UniGene:Bt.47838 ProteinModelPortal:Q3SYS0 STRING:Q3SYS0
            Ensembl:ENSBTAT00000001991 GeneID:532203 KEGG:bta:532203 CTD:79590
            GeneTree:ENSGT00390000014542 HOGENOM:HOG000031326
            HOVERGEN:HBG093899 InParanoid:Q3SYS0 OMA:NTHYRYV OrthoDB:EOG4KD6MZ
            EvolutionaryTrace:Q3SYS0 NextBio:20875629 Uniprot:Q3SYS0
        Length = 216

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 63/106 (59%), Positives = 79/106 (74%)

Query:   152 DWSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDS-QF---IIKQE 207
             DW +F GDRVEIL GKD GKQG V+Q+ ++ N V+VEGLNT+ + +G +  F   ++  E
Sbjct:    53 DWHLFCGDRVEILEGKDAGKQGKVVQVIRQRNWVVVEGLNTHYRYVGKTVDFRGTMVPSE 112

Query:   208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIP 253
             APLL  N+V LVDP DR   +VEWR+TEAG+RVRVS RSGRIIP P
Sbjct:   113 APLL-HNQVKLVDPMDRKPTEVEWRFTEAGERVRVSTRSGRIIPKP 157


>ZFIN|ZDB-GENE-040718-98 [details] [associations]
            symbol:mrpl24 "mitochondrial ribosomal protein L24"
            species:7955 "Danio rerio" [GO:0005622 "intracellular"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
            ZFIN:ZDB-GENE-040718-98 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 EMBL:BX927401 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 PANTHER:PTHR12903 TIGRFAMs:TIGR01079 CTD:79590
            GeneTree:ENSGT00390000014542 HOGENOM:HOG000031326
            HOVERGEN:HBG093899 OMA:NTHYRYV OrthoDB:EOG4KD6MZ EMBL:BC076182
            IPI:IPI00492356 RefSeq:NP_001002401.1 UniGene:Dr.9429 HSSP:Q9RXJ1
            ProteinModelPortal:Q6DH02 STRING:Q6DH02 PRIDE:Q6DH02
            Ensembl:ENSDART00000010862 GeneID:436674 KEGG:dre:436674
            InParanoid:A3KQS2 NextBio:20831117 Bgee:Q6DH02 Uniprot:Q6DH02
        Length = 216

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 65/156 (41%), Positives = 94/156 (60%)

Query:   119 FDFSTDRPWEVPFLARNRPWXXXXXXXXX-XXXXDWSIFKGDRVEILVGKDKGKQGYVIQ 177
             + + T+RPW +     N P               DW + +GD VE+L GK+KGKQG V Q
Sbjct:    19 YRYGTNRPWTIAARRLNPPGKRRRKVFVEPIANEDWPVVRGDTVEVLSGKEKGKQGKVAQ 78

Query:   178 IFQEINSVIVEGLNT---YLKKMGDSQ-FIIKQEAPLLVTNEVALVDPSDRMGCQVEWRY 233
             + +  N VI+EGLNT   Y+ + GD +   +  EAPLL+  ++AL+DP+DR   +++WRY
Sbjct:    79 VIRARNWVILEGLNTHYRYVGRSGDYRGTYLASEAPLLL-KDIALIDPTDRKPTEIQWRY 137

Query:   234 TEAGDRVRVSKRSGRIIPIPMAAYETHDYKTPGTYK 269
             TE G+RVRVS R+GRIIP P+  ++  D   P  +K
Sbjct:   138 TEEGERVRVSVRTGRIIPKPV--FQRKDGIVPQQWK 171


>UNIPROTKB|F1RHJ1 [details] [associations]
            symbol:MRPL24 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
            GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 HAMAP:MF_01326_B CTD:79590
            GeneTree:ENSGT00390000014542 OMA:NTHYRYV EMBL:CU582900
            RefSeq:NP_001231376.1 RefSeq:NP_001231377.1 UniGene:Ssc.2929
            Ensembl:ENSSSCT00000007086 GeneID:100156363 KEGG:ssc:100156363
            Uniprot:F1RHJ1
        Length = 216

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 62/106 (58%), Positives = 78/106 (73%)

Query:   152 DWSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQ----FIIKQE 207
             DW +F GD+VEIL GKD GKQG V+Q+ ++ N V+VEGLNT+ + +G +      +I  E
Sbjct:    53 DWHLFCGDKVEILEGKDAGKQGKVVQVIRQRNWVVVEGLNTHYRYVGKTVDYRGTMIPSE 112

Query:   208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIP 253
             APLL  N+V LVDP+DR    VEWR+TEAG+RVRVS RSGRIIP P
Sbjct:   113 APLL-HNQVKLVDPTDRKPTDVEWRFTEAGERVRVSTRSGRIIPKP 157


>UNIPROTKB|E2QS97 [details] [associations]
            symbol:MRPL24 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
            Pfam:PF00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HAMAP:MF_01326_B
            GeneTree:ENSGT00390000014542 OMA:NTHYRYV EMBL:AAEX03005314
            Ensembl:ENSCAFT00000026511 Uniprot:E2QS97
        Length = 219

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 67/141 (47%), Positives = 87/141 (61%)

Query:   118 DFDFSTDRPWEVPFLARNRPWXXXXXXXXX-XXXXDWSIFKGDRVEILVGKDKGKQGYVI 176
             D+ +   RP  +    +N P               DW +F GD VEIL GKD GKQG V+
Sbjct:    18 DYRYGMSRPGSLADRRKNPPGTRRRRVAVEPISDEDWHLFCGDTVEILEGKDAGKQGKVV 77

Query:   177 QIFQEINSVIVEGLNT---YLKKMGDSQ-FIIKQEAPLLVTNEVALVDPSDRMGCQVEWR 232
             Q+ ++ N V++EGLNT   Y+ K  +S+  +I  EAPLL  ++V LVDP DR   +VEWR
Sbjct:    78 QVIRQRNWVVLEGLNTHYRYVGKTAESRGTMIPSEAPLL-HHQVKLVDPVDRKPTEVEWR 136

Query:   233 YTEAGDRVRVSKRSGRIIPIP 253
             +TEAG+RVRVS RSGRIIP P
Sbjct:   137 FTEAGERVRVSSRSGRIIPKP 157


>MGI|MGI:1914957 [details] [associations]
            symbol:Mrpl24 "mitochondrial ribosomal protein L24"
            species:10090 "Mus musculus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR003256
            InterPro:IPR005825 PROSITE:PS01108 MGI:MGI:1914957 Pfam:PF00467
            GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 CTD:79590 GeneTree:ENSGT00390000014542
            HOGENOM:HOG000031326 HOVERGEN:HBG093899 OMA:NTHYRYV
            OrthoDB:EOG4KD6MZ eggNOG:NOG325647 HSSP:Q9RXJ1 EMBL:AK003362
            EMBL:AK008117 EMBL:AK008961 EMBL:AK013394 EMBL:AK019976
            EMBL:AK020157 EMBL:AK167623 EMBL:BC004736 EMBL:BC025506
            EMBL:BC031730 IPI:IPI00162769 RefSeq:NP_080867.2 UniGene:Mm.393802
            ProteinModelPortal:Q9CQ06 SMR:Q9CQ06 STRING:Q9CQ06
            PhosphoSite:Q9CQ06 PaxDb:Q9CQ06 PRIDE:Q9CQ06
            Ensembl:ENSMUST00000019854 Ensembl:ENSMUST00000119968
            Ensembl:ENSMUST00000121048 Ensembl:ENSMUST00000121920 GeneID:67707
            KEGG:mmu:67707 UCSC:uc008ptd.1 InParanoid:Q9CQ06 NextBio:325321
            Bgee:Q9CQ06 CleanEx:MM_MRPL24 Genevestigator:Q9CQ06 Uniprot:Q9CQ06
        Length = 216

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 63/140 (45%), Positives = 87/140 (62%)

Query:   119 FDFSTDRPWEVPFLARNRPWXXXXXXXXX-XXXXDWSIFKGDRVEILVGKDKGKQGYVIQ 177
             + +   RP  +    +N PW              DW +F GD VEIL GKD GKQG V+Q
Sbjct:    19 YRYGMSRPGSIADKRKNPPWSRRRPVVVEPISDEDWHLFCGDMVEILEGKDAGKQGKVVQ 78

Query:   178 IFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLVTNEVALVDPSDRMGCQVEWRY 233
             + ++ N V++EGLNT+ + +G ++     +I  EAPLL  ++V LVDP DR   +++WR+
Sbjct:    79 VVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIASEAPLL-HHQVKLVDPVDRKPTEIQWRF 137

Query:   234 TEAGDRVRVSKRSGRIIPIP 253
             TEAG+RVRVS RSGRIIP P
Sbjct:   138 TEAGERVRVSTRSGRIIPKP 157


>RGD|1359289 [details] [associations]
            symbol:mrpl24 "mitochondrial ribosomal protein L24"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] InterPro:IPR003256 InterPro:IPR005825
            PROSITE:PS01108 RGD:1359289 Pfam:PF00467 GO:GO:0005739
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30
            InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
            InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 CTD:79590 GeneTree:ENSGT00390000014542
            HOGENOM:HOG000031326 HOVERGEN:HBG093899 OrthoDB:EOG4KD6MZ
            eggNOG:NOG325647 HSSP:Q9RXJ1 EMBL:BC082018 IPI:IPI00372397
            RefSeq:NP_001007638.1 UniGene:Rn.162593 ProteinModelPortal:Q66H47
            STRING:Q66H47 PhosphoSite:Q66H47 Ensembl:ENSRNOT00000035271
            GeneID:295224 KEGG:rno:295224 UCSC:RGD:1359289 InParanoid:Q66H47
            NextBio:639133 Genevestigator:Q66H47 Uniprot:Q66H47
        Length = 216

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 63/140 (45%), Positives = 87/140 (62%)

Query:   119 FDFSTDRPWEVPFLARNRPWXXXXXXXXX-XXXXDWSIFKGDRVEILVGKDKGKQGYVIQ 177
             + +   RP  +    +N PW              DW +F GD VEIL GKD GKQG V+Q
Sbjct:    19 YRYGMSRPGSIADKRKNPPWSRRRPVVVEPISDEDWHLFCGDMVEILEGKDAGKQGKVVQ 78

Query:   178 IFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLVTNEVALVDPSDRMGCQVEWRY 233
             + ++ N V++EGLNT+ + +G ++     +I  EAPLL  ++V LVDP DR   +++WR+
Sbjct:    79 VVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIPSEAPLL-HHQVKLVDPVDRKPTEIQWRF 137

Query:   234 TEAGDRVRVSKRSGRIIPIP 253
             TEAG+RVRVS RSGRIIP P
Sbjct:   138 TEAGERVRVSTRSGRIIPKP 157


>UNIPROTKB|Q96A35 [details] [associations]
            symbol:MRPL24 "39S ribosomal protein L24, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
            Pfam:PF00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 EMBL:CH471121 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            EMBL:AL590666 eggNOG:COG0198 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            CTD:79590 HOVERGEN:HBG093899 OMA:NTHYRYV OrthoDB:EOG4KD6MZ
            HSSP:Q9RXJ1 EMBL:AK024570 EMBL:CR457329 EMBL:AK222500 EMBL:AK223066
            EMBL:BC012440 EMBL:BC016700 EMBL:AB051341 IPI:IPI00514506
            RefSeq:NP_078816.2 RefSeq:NP_663781.1 UniGene:Hs.418233
            ProteinModelPortal:Q96A35 SMR:Q96A35 IntAct:Q96A35 STRING:Q96A35
            PhosphoSite:Q96A35 DMDM:74751733 PaxDb:Q96A35 PRIDE:Q96A35
            Ensembl:ENST00000361531 Ensembl:ENST00000368211
            Ensembl:ENST00000412846 Ensembl:ENST00000420938
            Ensembl:ENST00000434558 GeneID:79590 KEGG:hsa:79590 UCSC:uc001fpw.1
            GeneCards:GC01M156707 HGNC:HGNC:14037 HPA:HPA030295 MIM:611836
            neXtProt:NX_Q96A35 PharmGKB:PA30954 InParanoid:Q96A35
            PhylomeDB:Q96A35 GenomeRNAi:79590 NextBio:68600 Bgee:Q96A35
            CleanEx:HS_MRPL24 Genevestigator:Q96A35 Uniprot:Q96A35
        Length = 216

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 64/140 (45%), Positives = 83/140 (59%)

Query:   119 FDFSTDRPWEVPFLARNRPWXXXXXXXXX-XXXXDWSIFKGDRVEILVGKDKGKQGYVIQ 177
             + +    P  V    +N PW              DW +F GD VEIL GKD GKQG V+Q
Sbjct:    19 YRYGMSPPGSVADKRKNPPWIRRRPVVVEPISDEDWYLFCGDTVEILEGKDAGKQGKVVQ 78

Query:   178 IFQEINSVIVEGLNTYLKKMGDSQ----FIIKQEAPLLVTNEVALVDPSDRMGCQVEWRY 233
             + ++ N V+V GLNT+ + +G +      +I  EAPLL   +V LVDP DR   ++EWR+
Sbjct:    79 VIRQRNWVVVGGLNTHYRYIGKTMDYRGTMIPSEAPLL-HRQVKLVDPMDRKPTEIEWRF 137

Query:   234 TEAGDRVRVSKRSGRIIPIP 253
             TEAG+RVRVS RSGRIIP P
Sbjct:   138 TEAGERVRVSTRSGRIIPKP 157


>WB|WBGene00019076 [details] [associations]
            symbol:mrpl-24 species:6239 "Caenorhabditis elegans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
            [GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
            "receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003256
            InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 GO:GO:0005739
            GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
            GO:GO:0016246 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
            GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            PANTHER:PTHR12903 GeneTree:ENSGT00390000014542 HOGENOM:HOG000031326
            OMA:NTHYRYV EMBL:FO080462 PIR:T29904 RefSeq:NP_491613.1
            ProteinModelPortal:P91353 SMR:P91353 DIP:DIP-24452N IntAct:P91353
            MINT:MINT-1043210 STRING:P91353 PaxDb:P91353 EnsemblMetazoa:F59A3.3
            GeneID:172204 KEGG:cel:CELE_F59A3.3 UCSC:F59A3.3 CTD:172204
            WormBase:F59A3.3 eggNOG:NOG325647 InParanoid:P91353 NextBio:874477
            Uniprot:P91353
        Length = 278

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 53/126 (42%), Positives = 77/126 (61%)

Query:   152 DWSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYL-------KKMGDSQFII 204
             +W+ F GD V+++VGKDKG+QG V+   ++ + VIV+GL+T L       +K+G  + + 
Sbjct:   106 EWTFFPGDLVQVMVGKDKGRQGLVLTTSRDSSDVIVDGLHTKLGEDMEGSEKLGVDKTLR 165

Query:   205 KQEAPLLVTN-EVALVDPSDRMGCQVEWRYTEAGDR-VRVSKRSGRIIPIPMAAYETHDY 262
              QE PL V+  +V LVDP+D   C+  W+    GD  +RVS RSG  IPIP  A  T++Y
Sbjct:   166 WQEQPLSVSKKQVMLVDPNDEQPCEARWQLNGPGDEYIRVSTRSGYEIPIPSQAKVTYEY 225

Query:   263 KTPGTY 268
               P  Y
Sbjct:   226 LQPENY 231


>TIGR_CMR|BA_0121 [details] [associations]
            symbol:BA_0121 "ribosomal protein L24" species:198094
            "Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30
            InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
            InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
            HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            ProtClustDB:PRK00004 HAMAP:MF_01326_B RefSeq:NP_842689.1
            RefSeq:YP_016726.1 RefSeq:YP_026407.1 ProteinModelPortal:Q81VR9
            DNASU:1086419 EnsemblBacteria:EBBACT00000008351
            EnsemblBacteria:EBBACT00000018007 EnsemblBacteria:EBBACT00000023262
            GeneID:1086419 GeneID:2819215 GeneID:2851558 KEGG:ban:BA_0121
            KEGG:bar:GBAA_0121 KEGG:bat:BAS0121 OMA:QEAPIQA
            BioCyc:BANT260799:GJAJ-132-MONOMER
            BioCyc:BANT261594:GJ7F-134-MONOMER Uniprot:Q81VR9
        Length = 103

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 41/99 (41%), Positives = 63/99 (63%)

Query:   157 KGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQEAPLL 211
             KGD+V+++ GKDKGKQG ++  F + N VIVEG+N   K    SQ      II +EAP+ 
Sbjct:     5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64

Query:   212 VTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
             V+N V ++DP      +V ++  E G +VR++K+SG ++
Sbjct:    65 VSN-VMILDPKTGEPTRVGFK-VEDGKKVRIAKKSGELL 101


>TAIR|locus:504954880 [details] [associations]
            symbol:AT5G23535 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
            ribosomal subunit" evidence=ISS] InterPro:IPR003256
            InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            EMBL:AB025633 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 HOGENOM:HOG000039891 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 HAMAP:MF_01326_B OMA:VIQAYPA EMBL:BT011601
            EMBL:BT012239 EMBL:AK227904 IPI:IPI00524746 RefSeq:NP_680212.1
            UniGene:At.44055 ProteinModelPortal:Q9LT09 SMR:Q9LT09 STRING:Q9LT09
            PaxDb:Q9LT09 PRIDE:Q9LT09 EnsemblPlants:AT5G23535.1 GeneID:832419
            KEGG:ath:AT5G23535 TAIR:At5g23535 InParanoid:Q9LT09
            PhylomeDB:Q9LT09 ProtClustDB:CLSN2690194 Genevestigator:Q9LT09
            Uniprot:Q9LT09
        Length = 159

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 47/108 (43%), Positives = 62/108 (57%)

Query:   153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLK--KMG-DSQF-IIKQEA 208
             W I +GD V I+ GKDKG+ G + ++ +  N VIVEG N   K  K G D +  I   EA
Sbjct:    13 WKILRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLIKKHIKGGPDHEGGIFTVEA 72

Query:   209 PLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSK---RSGRIIPIP 253
             PL  +N V +VDP     C+V  +Y E G +VRV++    SG IIP P
Sbjct:    73 PLHASN-VQVVDPVTGRPCKVGVKYLEDGTKVRVARGTGTSGSIIPRP 119


>GENEDB_PFALCIPARUM|PFF0245w [details] [associations]
            symbol:PFF0245w "50S ribosomal subunit L24,
            putative" species:5833 "Plasmodium falciparum" [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISS]
            InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
            GO:GO:0006412 GO:GO:0003735 EMBL:AL844505 Gene3D:2.30.30.30
            InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
            InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 HAMAP:MF_01326_B RefSeq:XP_966040.1
            ProteinModelPortal:C6KSP8 EnsemblProtists:PFF0245w:mRNA
            GeneID:3885712 KEGG:pfa:PFF0245w EuPathDB:PlasmoDB:PF3D7_0605000
            HOGENOM:HOG000281435 OMA:FEEEINS ProtClustDB:CLSZ2432297
            Uniprot:C6KSP8
        Length = 194

 Score = 162 (62.1 bits), Expect = 6.0e-12, P = 6.0e-12
 Identities = 41/110 (37%), Positives = 61/110 (55%)

Query:   153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQFIIKQEAPLLV 212
             W I KGD V+++ GKDKGK G V+   +  N V V+G N   K   D++F+   E  +  
Sbjct:    44 WKIRKGDEVKVISGKDKGKIGEVLSCDKFRNMVKVKGCNMR-KLFVDNKFVYI-EKKIHY 101

Query:   213 TNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPMAAYETHDY 262
             +N V L+D   +   +V  RYT+    +R+SK+SG +IP P    +  DY
Sbjct:   102 SN-VQLIDNFLKTNTKVALRYTDDNQVIRISKKSGTVIPWPSEKTKEEDY 150


>UNIPROTKB|C6KSP8 [details] [associations]
            symbol:PFF0245w "Mitochondrial ribosomal protein L24,
            putative" species:36329 "Plasmodium falciparum 3D7" [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISS]
            InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
            GO:GO:0006412 GO:GO:0003735 EMBL:AL844505 Gene3D:2.30.30.30
            InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
            InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 HAMAP:MF_01326_B RefSeq:XP_966040.1
            ProteinModelPortal:C6KSP8 EnsemblProtists:PFF0245w:mRNA
            GeneID:3885712 KEGG:pfa:PFF0245w EuPathDB:PlasmoDB:PF3D7_0605000
            HOGENOM:HOG000281435 OMA:FEEEINS ProtClustDB:CLSZ2432297
            Uniprot:C6KSP8
        Length = 194

 Score = 162 (62.1 bits), Expect = 6.0e-12, P = 6.0e-12
 Identities = 41/110 (37%), Positives = 61/110 (55%)

Query:   153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQFIIKQEAPLLV 212
             W I KGD V+++ GKDKGK G V+   +  N V V+G N   K   D++F+   E  +  
Sbjct:    44 WKIRKGDEVKVISGKDKGKIGEVLSCDKFRNMVKVKGCNMR-KLFVDNKFVYI-EKKIHY 101

Query:   213 TNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPMAAYETHDY 262
             +N V L+D   +   +V  RYT+    +R+SK+SG +IP P    +  DY
Sbjct:   102 SN-VQLIDNFLKTNTKVALRYTDDNQVIRISKKSGTVIPWPSEKTKEEDY 150


>DICTYBASE|DDB_G0269640 [details] [associations]
            symbol:DDB_G0269640 "39S ribosomal protein L24,
            mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0006412
            "translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR003256
            InterPro:IPR005825 PROSITE:PS01108 dictyBase:DDB_G0269640
            Pfam:PF00467 EMBL:AAFI02000005 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            HAMAP:MF_01326_B RefSeq:XP_646137.1 ProteinModelPortal:Q55DJ4
            STRING:Q55DJ4 EnsemblProtists:DDB0190423 GeneID:8617087
            KEGG:ddi:DDB_G0269640 InParanoid:Q55DJ4 OMA:SHIDPKY
            ProtClustDB:CLSZ2431389 Uniprot:Q55DJ4
        Length = 164

 Score = 159 (61.0 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 40/106 (37%), Positives = 62/106 (58%)

Query:   153 WSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMG-----DSQFIIKQE 207
             W   KGD+V+I+ GKDKGKQG +  + ++ +++IVEGL   LKK+             +E
Sbjct:    19 WKYVKGDKVQIISGKDKGKQGIIKSVNKKDSNLIVEGLKL-LKKLTKPNKRSKAMAYTKE 77

Query:   208 APLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIP 253
             AP+  +N ++ +DP   + C+V ++  + G R RVSK S  II  P
Sbjct:    78 APIHYSN-ISHIDPKYNVPCKVRFQLVD-GARERVSKISNSIIAKP 121


>UNIPROTKB|P60627 [details] [associations]
            symbol:rplX "50S ribosomal protein L24" species:1773
            "Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
            [GO:0040007 "growth" evidence=IMP] InterPro:IPR003256
            InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 GO:GO:0040007
            GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
            GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 ProtClustDB:PRK00004 HAMAP:MF_01326_B
            OMA:VIQAYPA PIR:F70643 RefSeq:NP_215229.1 RefSeq:NP_335160.1
            RefSeq:YP_006514059.1 ProteinModelPortal:P60627 SMR:P60627
            PRIDE:P60627 EnsemblBacteria:EBMYCT00000000150
            EnsemblBacteria:EBMYCT00000071486 GeneID:13318604 GeneID:888421
            GeneID:926033 KEGG:mtc:MT0741.1 KEGG:mtu:Rv0715 KEGG:mtv:RVBD_0715
            PATRIC:18123363 TubercuList:Rv0715 Uniprot:P60627
        Length = 105

 Score = 158 (60.7 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 43/105 (40%), Positives = 62/105 (59%)

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF--------IIKQ 206
             + KGD V ++ GKDKG +G V+Q + + N V+VEG+N   K    S          I+ Q
Sbjct:     3 VHKGDTVLVISGKDKGAKGKVLQAYPDRNRVLVEGVNRIKKHTAISTTQRGARSGGIVTQ 62

Query:   207 EAPLLVTNEVALVDPSDRMGCQVEWRYTE-AGDRVRVSKRSGRII 250
             EAP+ V+N V +VD SD    ++ +R  E  G RVR+SKR+G+ I
Sbjct:    63 EAPIHVSN-VMVVD-SDGKPTRIGYRVDEETGKRVRISKRNGKDI 105


>GENEDB_PFALCIPARUM|PFL1150c [details] [associations]
            symbol:PFL1150c "ribosomal protein L24,
            putative" species:5833 "Plasmodium falciparum" [GO:0042254
            "ribosome biogenesis" evidence=ISS] [GO:0022625 "cytosolic large
            ribosomal subunit" evidence=ISS] InterPro:IPR003256 Pfam:PF00467
            GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AE014188
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 GO:GO:0022625 InterPro:IPR005824 SMART:SM00739
            PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HAMAP:MF_01326_B
            RefSeq:XP_001350636.1 ProteinModelPortal:Q8I5H8
            EnsemblProtists:PFL1150c:mRNA GeneID:811282 KEGG:pfa:PFL1150c
            EuPathDB:PlasmoDB:PF3D7_1223900 HOGENOM:HOG000281072 OMA:EMPIHIT
            ProtClustDB:CLSZ2445030 Uniprot:Q8I5H8
        Length = 227

 Score = 154 (59.3 bits), Expect = 9.7e-10, P = 9.7e-10
 Identities = 42/103 (40%), Positives = 62/103 (60%)

Query:   158 GDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMG----DSQ--FIIKQEAPLL 211
             GD V++L G DK K+G V+ I  + N+V V+G N  +KK      D++   II QE P+ 
Sbjct:    59 GDLVKVLYGPDKDKEGLVLSINPKRNTVTVDGCN--MKKSAWNVTDNKKGSIITQEMPIH 116

Query:   212 VTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPM 254
             +TN V+L+DP  +    V+ RY   G+ VR+SK SG  +P P+
Sbjct:   117 ITN-VSLLDPISKKPTVVKRRYMMNGECVRISKISGCAMPEPV 158


>UNIPROTKB|Q8I5H8 [details] [associations]
            symbol:PFL1150c "Mitochondrial ribosomal protein L24-2,
            putative" species:36329 "Plasmodium falciparum 3D7" [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISS] [GO:0042254
            "ribosome biogenesis" evidence=ISS] InterPro:IPR003256 Pfam:PF00467
            GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AE014188
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 GO:GO:0022625 InterPro:IPR005824 SMART:SM00739
            PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HAMAP:MF_01326_B
            RefSeq:XP_001350636.1 ProteinModelPortal:Q8I5H8
            EnsemblProtists:PFL1150c:mRNA GeneID:811282 KEGG:pfa:PFL1150c
            EuPathDB:PlasmoDB:PF3D7_1223900 HOGENOM:HOG000281072 OMA:EMPIHIT
            ProtClustDB:CLSZ2445030 Uniprot:Q8I5H8
        Length = 227

 Score = 154 (59.3 bits), Expect = 9.7e-10, P = 9.7e-10
 Identities = 42/103 (40%), Positives = 62/103 (60%)

Query:   158 GDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMG----DSQ--FIIKQEAPLL 211
             GD V++L G DK K+G V+ I  + N+V V+G N  +KK      D++   II QE P+ 
Sbjct:    59 GDLVKVLYGPDKDKEGLVLSINPKRNTVTVDGCN--MKKSAWNVTDNKKGSIITQEMPIH 116

Query:   212 VTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPM 254
             +TN V+L+DP  +    V+ RY   G+ VR+SK SG  +P P+
Sbjct:   117 ITN-VSLLDPISKKPTVVKRRYMMNGECVRISKISGCAMPEPV 158


>UNIPROTKB|H9KZY7 [details] [associations]
            symbol:MRPL24 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] InterPro:IPR003256 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 PANTHER:PTHR12903 GeneTree:ENSGT00390000014542
            EMBL:AADN02034595 Ensembl:ENSGALT00000021620 OMA:YIAREAP
            Uniprot:H9KZY7
        Length = 95

 Score = 139 (54.0 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 25/37 (67%), Positives = 31/37 (83%)

Query:   218 LVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPM 254
             LVDP DR   +V+WRYTE G+RVRVS R+GRIIP+P+
Sbjct:     1 LVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPL 37


>TIGR_CMR|CHY_2298 [details] [associations]
            symbol:CHY_2298 "ribosomal protein L24" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] InterPro:IPR003256 PROSITE:PS01108 Pfam:PF00467
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 ProtClustDB:PRK00004 HAMAP:MF_01326_B
            RefSeq:YP_361107.1 ProteinModelPortal:Q3A9S7 SMR:Q3A9S7
            STRING:Q3A9S7 GeneID:3726665 KEGG:chy:CHY_2298 PATRIC:21277667
            OMA:VIQAYPA BioCyc:CHYD246194:GJCN-2297-MONOMER Uniprot:Q3A9S7
        Length = 107

 Score = 134 (52.2 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 32/96 (33%), Positives = 56/96 (58%)

Query:   157 KGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQEAPLL 211
             KGD V ++ GKDK K+G ++Q+  + N V+VEG+N   +    +       I+++EAP+ 
Sbjct:     8 KGDMVLVIAGKDKDKKGKIVQVLPKENRVVVEGVNIVKRHTRPNPKLPQGGIVEKEAPIH 67

Query:   212 VTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSG 247
             V+N V ++ PS     +V  ++   G ++RV K+ G
Sbjct:    68 VSN-VMVICPSCGKPTRVGKKFLADGKKIRVCKKCG 102


>TIGR_CMR|CBU_0249 [details] [associations]
            symbol:CBU_0249 "ribosomal protein L24" species:227377
            "Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
            GO:GO:0006412 GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR
            GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            HOGENOM:HOG000039892 ProtClustDB:PRK00004 HAMAP:MF_01326_B
            OMA:VIQAYPA RefSeq:NP_819293.1 ProteinModelPortal:Q83ER5 SMR:Q83ER5
            PRIDE:Q83ER5 GeneID:1208130 KEGG:cbu:CBU_0249 PATRIC:17929191
            BioCyc:CBUR227377:GJ7S-255-MONOMER Uniprot:Q83ER5
        Length = 107

 Score = 123 (48.4 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 31/104 (29%), Positives = 60/104 (57%)

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKM------GDSQFIIKQEA 208
             I K D V ++ G+DKG+QG V+++    + ++VEG+N   K +       +   I+++E 
Sbjct:     6 IKKDDTVIVITGRDKGRQGKVLKVLPN-SRLLVEGINLVKKHVKPNPNKNEQGGILEREL 64

Query:   209 PLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPI 252
              + V+N VA+ +P+ +   +V  +  E G +VR+ K +G +I +
Sbjct:    65 SIHVSN-VAIYNPAAKKADRVGIKTLEDGSKVRIFKSNGEVIDV 107


>TIGR_CMR|GSU_2846 [details] [associations]
            symbol:GSU_2846 "ribosomal protein L24" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR003256
            PROSITE:PS01108 Pfam:PF00467 GO:GO:0006412 GO:GO:0005840
            EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
            HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            ProtClustDB:PRK00004 HAMAP:MF_01326_B RefSeq:NP_953889.1
            ProteinModelPortal:P60740 GeneID:2686791 KEGG:gsu:GSU2846
            PATRIC:22028539 OMA:LNIVKRH BioCyc:GSUL243231:GH27-2812-MONOMER
            Uniprot:P60740
        Length = 108

 Score = 121 (47.7 bits), Expect = 3.2e-07, P = 3.2e-07
 Identities = 33/97 (34%), Positives = 54/97 (55%)

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNT---YLKKMGDSQF-IIKQEAPL 210
             I KGD V ++ GKDK K G V++I  + + V+VEGLN    + +  G+    I+++EAPL
Sbjct:     8 IKKGDTVSVVTGKDKSKTGTVLRILPKRDGVLVEGLNIVKRHTRARGNEPGGIVEKEAPL 67

Query:   211 LVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSG 247
              V+N +      ++   + +    E G +VRV  + G
Sbjct:    68 HVSNVMLYCGKCEKP-VRAKKAILEDGKKVRVCVKCG 103


>TIGR_CMR|ECH_0420 [details] [associations]
            symbol:ECH_0420 "ribosomal protein L24" species:205920
            "Ehrlichia chaffeensis str. Arkansas" [GO:0000315 "organellar large
            ribosomal subunit" evidence=ISS] [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
            Pfam:PF00467 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30
            InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
            InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198 KO:K02895
            PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HOGENOM:HOG000039892
            ProtClustDB:PRK00004 HAMAP:MF_01326_B OMA:VIQAYPA
            RefSeq:YP_507238.1 ProteinModelPortal:Q2GH45 STRING:Q2GH45
            GeneID:3927966 KEGG:ech:ECH_0420 PATRIC:20576317
            BioCyc:ECHA205920:GJNR-421-MONOMER Uniprot:Q2GH45
        Length = 109

 Score = 119 (46.9 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 37/107 (34%), Positives = 58/107 (54%)

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQ------EINSVIVEGLNTYLKKMGDSQF----II 204
             I  GD V ++ GKDKGK G VI++ +      +++  IV G+N   K +  +Q     II
Sbjct:     5 IIAGDDVIVISGKDKGKMGKVIKVLKKKHCGKDVSFAIVSGVNVCRKSVKATQKSDGGII 64

Query:   205 KQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDR-VRVSKRSGRII 250
               E P+ ++N +AL D +  +G Q    Y   G++ VR  K SG++I
Sbjct:    65 SVEKPINLSN-IALFDST--LGIQTRVGYKFIGEKKVRFMKSSGKVI 108


>TIGR_CMR|SO_0242 [details] [associations]
            symbol:SO_0242 "ribosomal protein L24" species:211586
            "Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR003256 PROSITE:PS01108 Pfam:PF00467 GO:GO:0006412
            GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
            GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            HOGENOM:HOG000039892 ProtClustDB:PRK00004 HAMAP:MF_01326_B
            OMA:QEAPIQA RefSeq:NP_715882.1 ProteinModelPortal:Q8EK58 SMR:Q8EK58
            GeneID:1168125 KEGG:son:SO_0242 PATRIC:23520177 Uniprot:Q8EK58
        Length = 104

 Score = 119 (46.9 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 34/102 (33%), Positives = 57/102 (55%)

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLK------KMGDSQFIIKQEA 208
             I + D V +L GKDKGK+  V Q+      +IVEG+N   K      ++G +  I+++EA
Sbjct:     5 IRRQDEVIVLAGKDKGKRAKVAQVLPT-GKLIVEGINLVKKHQKPNPQLGVAGGIVEKEA 63

Query:   209 PLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
             P+  +N VA+ +P      +V +R+ E G +VR  K +  ++
Sbjct:    64 PIQASN-VAIFNPVTGKADRVGFRF-EDGKKVRFFKSNSELV 103


>UNIPROTKB|Q9KNZ5 [details] [associations]
            symbol:rplX "50S ribosomal protein L24" species:243277
            "Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
            "structural constituent of ribosome" evidence=ISS] [GO:0006412
            "translation" evidence=ISS] InterPro:IPR003256 InterPro:IPR005825
            PROSITE:PS01108 Pfam:PF00467 GO:GO:0006412 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
            KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079 ProtClustDB:PRK00004
            HAMAP:MF_01326_B OMA:QEAPIQA PIR:C82058 RefSeq:NP_232213.1
            ProteinModelPortal:Q9KNZ5 SMR:Q9KNZ5 PRIDE:Q9KNZ5 DNASU:2615602
            GeneID:2615602 KEGG:vch:VC2585 PATRIC:20084196 Uniprot:Q9KNZ5
        Length = 105

 Score = 117 (46.2 bits), Expect = 8.9e-07, P = 8.9e-07
 Identities = 35/102 (34%), Positives = 55/102 (53%)

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKK------MGDSQFIIKQEA 208
             I + D V +L GKDKGK+G V ++      VIVEG+N   K       MG    I++QEA
Sbjct:     5 IRQNDEVIVLAGKDKGKKGKVTKVLAT-GKVIVEGINLVKKHQKPVPAMGVQGGIVEQEA 63

Query:   209 PLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
              + V+N +A+ +       ++ +R+ E G +VR  K +  I+
Sbjct:    64 AIDVSN-IAIFNAKTGKADRIGFRF-EDGKKVRFFKSNNEIV 103


>TIGR_CMR|VC_2585 [details] [associations]
            symbol:VC_2585 "ribosomal protein L24" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
            GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
            GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            ProtClustDB:PRK00004 HAMAP:MF_01326_B OMA:QEAPIQA PIR:C82058
            RefSeq:NP_232213.1 ProteinModelPortal:Q9KNZ5 SMR:Q9KNZ5
            PRIDE:Q9KNZ5 DNASU:2615602 GeneID:2615602 KEGG:vch:VC2585
            PATRIC:20084196 Uniprot:Q9KNZ5
        Length = 105

 Score = 117 (46.2 bits), Expect = 8.9e-07, P = 8.9e-07
 Identities = 35/102 (34%), Positives = 55/102 (53%)

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKK------MGDSQFIIKQEA 208
             I + D V +L GKDKGK+G V ++      VIVEG+N   K       MG    I++QEA
Sbjct:     5 IRQNDEVIVLAGKDKGKKGKVTKVLAT-GKVIVEGINLVKKHQKPVPAMGVQGGIVEQEA 63

Query:   209 PLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
              + V+N +A+ +       ++ +R+ E G +VR  K +  I+
Sbjct:    64 AIDVSN-IAIFNAKTGKADRIGFRF-EDGKKVRFFKSNNEIV 103


>TIGR_CMR|SPO_0496 [details] [associations]
            symbol:SPO_0496 "ribosomal protein L24" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR003256
            InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
            eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            HOGENOM:HOG000039892 ProtClustDB:PRK00004 HAMAP:MF_01326_B
            OMA:QEAPIQA RefSeq:YP_165758.1 ProteinModelPortal:Q5LW47
            GeneID:3195436 KEGG:sil:SPO0496 PATRIC:23374253 Uniprot:Q5LW47
        Length = 103

 Score = 114 (45.2 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 29/98 (29%), Positives = 56/98 (57%)

Query:   157 KGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQFI----IKQEAPLLV 212
             KGD+V +L GKDKGK+G +  +  +    +V+G+N  ++    +Q      + +  P+ +
Sbjct:     7 KGDKVVVLAGKDKGKEGTITSVDPKAGKAVVDGVNIAIRHTRQTQTSQGGRLPKALPIDL 66

Query:   213 TNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
             +N +AL+D + +   +V +R  E   +VR +K +G +I
Sbjct:    67 SN-LALLDKNGK-ATRVGFRM-EGDKKVRFAKTTGDVI 101


>TIGR_CMR|DET_0485 [details] [associations]
            symbol:DET_0485 "ribosomal protein L24" species:243164
            "Dehalococcoides ethenogenes 195" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000027
            GenomeReviews:CP000027_GR GO:GO:0019843 Gene3D:2.30.30.30
            InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
            InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
            HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            ProtClustDB:PRK00004 HAMAP:MF_01326_B RefSeq:YP_181229.1
            ProteinModelPortal:Q3Z970 STRING:Q3Z970 GeneID:3230244
            KEGG:det:DET0485 PATRIC:21608039 OMA:IAIADPK
            BioCyc:DETH243164:GJNF-485-MONOMER Uniprot:Q3Z970
        Length = 103

 Score = 111 (44.1 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 33/99 (33%), Positives = 51/99 (51%)

Query:   157 KGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNT---YLKKMGDSQF--IIKQEAPLL 211
             K D V ++ GKDKGK G V   F   + V+VEG+N    + +  G ++   II++EAPL 
Sbjct:     5 KNDNVLVIAGKDKGKTGKVRYAFPRTDRVLVEGVNMIKRHSRARGQAKQAGIIEREAPLH 64

Query:   212 VTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
             V+N + L    ++   ++  R    G  VR  K    +I
Sbjct:    65 VSNLMLLCSKCNKPA-RIGSRELADGKSVRYCKSCNEVI 102


>UNIPROTKB|P60624 [details] [associations]
            symbol:rplX "50S ribosomal subunit protein L24"
            species:83333 "Escherichia coli K-12" [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0019843
            "rRNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
            EMBL:X01563 Pfam:PF00467 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006412
            EMBL:U18997 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
            Gene3D:2.30.30.30 InterPro:IPR014722 PDB:2VHM PDBsum:2VHM PDB:2RDO
            PDBsum:2RDO InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824
            SMART:SM00739 eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12
            PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y
            PDBsum:3J11 PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS
            PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB
            PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO
            PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV
            PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N
            PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P
            PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01
            PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ
            PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR
            PDB:4GAU PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8
            PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC
            PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO
            PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI
            PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1
            PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2
            PDBsum:3DF4 PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N
            PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22
            PDBsum:3IZT PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR
            PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ
            PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S
            PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX PDB:2VRH
            PDBsum:2VRH HOGENOM:HOG000039892 ProtClustDB:PRK00004
            HAMAP:MF_01326_B OMA:QEAPIQA EMBL:M10195 PIR:H65123
            RefSeq:NP_417768.1 RefSeq:YP_492123.1 ProteinModelPortal:P60624
            SMR:P60624 DIP:DIP-47846N IntAct:P60624 MINT:MINT-1294921
            PaxDb:P60624 PRIDE:P60624 EnsemblBacteria:EBESCT00000001889
            EnsemblBacteria:EBESCT00000015488 GeneID:12934409 GeneID:947810
            KEGG:ecj:Y75_p3867 KEGG:eco:b3309 PATRIC:32122050 EchoBASE:EB0877
            EcoGene:EG10884 BioCyc:EcoCyc:EG10884-MONOMER
            BioCyc:ECOL316407:JW3271-MONOMER EvolutionaryTrace:P60624
            Genevestigator:P60624 Uniprot:P60624
        Length = 104

 Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 34/102 (33%), Positives = 53/102 (51%)

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKK------MGDSQFIIKQEA 208
             I + D V +L GKDKGK+G V  +      VIVEG+N   K       +     I+++EA
Sbjct:     5 IRRDDEVIVLTGKDKGKRGKVKNVLSS-GKVIVEGINLVKKHQKPVPALNQPGGIVEKEA 63

Query:   209 PLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
              + V+N VA+ + +     +V +R+ E G +VR  K +   I
Sbjct:    64 AIQVSN-VAIFNAATGKADRVGFRF-EDGKKVRFFKSNSETI 103


>TAIR|locus:2172154 [details] [associations]
            symbol:RPL24 "plastid ribosomal protein L24" species:3702
            "Arabidopsis thaliana" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA;ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0015934 "large
            ribosomal subunit" evidence=ISS] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0032544 "plastid translation" evidence=IMP] [GO:0019288
            "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] InterPro:IPR003256
            InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0009941 GO:GO:0005840
            GO:GO:0003735 GO:GO:0019843 EMBL:AB016879 GO:GO:0032544
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 EMBL:Y09635
            EMBL:BT001990 EMBL:BT006573 EMBL:AY086810 IPI:IPI00544271
            RefSeq:NP_851190.1 UniGene:At.47267 ProteinModelPortal:P92959
            SMR:P92959 STRING:P92959 PaxDb:P92959 PRIDE:P92959
            EnsemblPlants:AT5G54600.1 GeneID:835549 KEGG:ath:AT5G54600
            GeneFarm:199 TAIR:At5g54600 eggNOG:COG0198 HOGENOM:HOG000039891
            InParanoid:P92959 KO:K02895 OMA:RWERKEC PhylomeDB:P92959
            ProtClustDB:CLSN2680537 Genevestigator:P92959 PANTHER:PTHR12903
            TIGRFAMs:TIGR01079 Uniprot:P92959
        Length = 198

 Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 31/98 (31%), Positives = 54/98 (55%)

Query:   158 GDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKM-----GDSQFIIKQEAPLLV 212
             GD V+++ G+DKGK G V +IF   ++++++ +N   K M     G+   I+K EAP+  
Sbjct:    76 GDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREEGEPGQIVKIEAPIHS 135

Query:   213 TNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRII 250
             +N V L      +  +V  +  E G +VR   ++G +I
Sbjct:   136 SN-VMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELI 172


>TIGR_CMR|CJE_1864 [details] [associations]
            symbol:CJE_1864 "ribosomal protein L24" species:195099
            "Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
            Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 EMBL:CP000025
            GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
            HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
            HAMAP:MF_01326_B RefSeq:YP_179834.1 ProteinModelPortal:Q5HSA1
            SMR:Q5HSA1 STRING:Q5HSA1 GeneID:3232491 KEGG:cjr:CJE1864
            PATRIC:20045560 OMA:EGSIHAS ProtClustDB:PRK12281
            BioCyc:CJEJ195099:GJC0-1903-MONOMER Uniprot:Q5HSA1
        Length = 77

 Score = 93 (37.8 bits), Expect = 0.00041, P = 0.00041
 Identities = 25/70 (35%), Positives = 39/70 (55%)

Query:   155 IFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQF-----IIKQEAP 209
             I KGD V+++ G DKGK G V+ ++ +   V+VEG     K +  S+       I +E P
Sbjct:     7 IKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKIAKKAIKPSEKNPNGGFINKEMP 66

Query:   210 LLVTNEVALV 219
             + ++N VA V
Sbjct:    67 MDISN-VAKV 75


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.139   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      273       260   0.00089  114 3  11 22  0.48    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  31
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  213 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  22.28u 0.07s 22.35t   Elapsed:  00:00:27
  Total cpu time:  22.29u 0.07s 22.36t   Elapsed:  00:00:29
  Start:  Thu Aug 15 14:01:23 2013   End:  Thu Aug 15 14:01:52 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with mRpL24 mRpL24 mRpL24 Probable 39S ribosomal protein L24, mitochondrial	protein from Drosophila pseudoobscura pseudoobscura	4.8e-39
BLAST match view associations BLAST with mRpL24 mRpL24 mRpL24 mitochondrial ribosomal protein L24	protein from Drosophila melanogaster	5.5e-38
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 39S ribosomal protein L24, mitochondrial	protein from Bos taurus	7.3e-27
BLAST match view associations BLAST with mrpl24 mrpl24 mrpl24 mitochondrial ribosomal protein L24	gene_product from Danio rerio	1.9e-26
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 Uncharacterized protein	protein from Sus scrofa	2.5e-26
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 Uncharacterized protein	protein from Canis lupus familiaris	4.0e-26
BLAST match view associations BLAST with Mrpl24 Mrpl24 Mrpl24 mitochondrial ribosomal protein L24	protein from Mus musculus	5.2e-26
BLAST match view associations BLAST with mrpl24 mrpl24 mrpl24 mitochondrial ribosomal protein L24	gene from Rattus norvegicus	5.2e-26
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 39S ribosomal protein L24, mitochondrial	protein from Homo sapiens	3.6e-25
BLAST match view associations BLAST with mrpl-24 mrpl-24 mrpl-24	gene from Caenorhabditis elegans	1.7e-20
BLAST match view associations BLAST with BA_0121 BA_0121 BA_0121 ribosomal protein L24	protein from Bacillus anthracis str. Ames	1.0e-13
BLAST match view associations BLAST with AT5G23535 AT5G23535 AT5G23535	protein from Arabidopsis thaliana	7.1e-13
BLAST match view associations BLAST with PFF0245w PFF0245w PFF0245w 50S ribosomal subunit L24, putative	gene from Plasmodium falciparum	6.0e-12
BLAST match view associations BLAST with PFF0245w PFF0245w PFF0245w Mitochondrial ribosomal protein L24, putative	protein from Plasmodium falciparum 3D7	6.0e-12
BLAST match view associations BLAST with DDB_G0269640 DDB_G0269640 DDB_G0269640 39S ribosomal protein L24, mitochondrial	gene from Dictyostelium discoideum	1.4e-11
BLAST match view associations BLAST with rplX rplX rplX 50S ribosomal protein L24	protein from Mycobacterium tuberculosis	1.8e-11
BLAST match view associations BLAST with PFL1150c PFL1150c PFL1150c ribosomal protein L24, putative	gene from Plasmodium falciparum	9.7e-10
BLAST match view associations BLAST with PFL1150c PFL1150c PFL1150c Mitochondrial ribosomal protein L24-2, putative	protein from Plasmodium falciparum 3D7	9.7e-10
BLAST match view associations BLAST with MRPL24 MRPL24 MRPL24 Uncharacterized protein	protein from Gallus gallus	2.9e-09
BLAST match view associations BLAST with CHY_2298 CHY_2298 CHY_2298 ribosomal protein L24	protein from Carboxydothermus hydrogenoformans Z-2901	1.1e-08
BLAST match view associations BLAST with CBU_0249 CBU_0249 CBU_0249 ribosomal protein L24	protein from Coxiella burnetii RSA 493	1.9e-07
BLAST match view associations BLAST with GSU_2846 GSU_2846 GSU_2846 ribosomal protein L24	protein from Geobacter sulfurreducens PCA	3.2e-07
BLAST match view associations BLAST with ECH_0420 ECH_0420 ECH_0420 ribosomal protein L24	protein from Ehrlichia chaffeensis str. Arkansas	5.3e-07
BLAST match view associations BLAST with SO_0242 SO_0242 SO_0242 ribosomal protein L24	protein from Shewanella oneidensis MR-1	5.3e-07
BLAST match view associations BLAST with rplX rplX rplX 50S ribosomal protein L24	protein from Vibrio cholerae O1 biovar El Tor str. N16961	8.9e-07
BLAST match view associations BLAST with VC_2585 VC_2585 VC_2585 ribosomal protein L24	protein from Vibrio cholerae O1 biovar El Tor	8.9e-07
BLAST match view associations BLAST with SPO_0496 SPO_0496 SPO_0496 ribosomal protein L24	protein from Ruegeria pomeroyi DSS-3	1.9e-06
BLAST match view associations BLAST with DET_0485 DET_0485 DET_0485 ribosomal protein L24	protein from Dehalococcoides ethenogenes 195	4.2e-06
BLAST match view associations BLAST with rplX rplX rplX 50S ribosomal subunit protein L24	protein from Escherichia coli K-12	1.5e-05
BLAST match view associations BLAST with RPL24 RPL24 RPL24 AT5G54600	protein from Arabidopsis thaliana	3.5e-05
BLAST match view associations BLAST with CJE_1864 CJE_1864 CJE_1864 ribosomal protein L24	protein from Campylobacter jejuni RM1221	0.00041