Query psy5512
Match_columns 245
No_of_seqs 97 out of 99
Neff 5.1
Searched_HMMs 13730
Date Fri Aug 16 19:22:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5512.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5512hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nzia1 b.23.1.1 (A:1-117) Com 4.5 70 0.0051 21.2 -0.3 12 165-176 4-15 (117)
2 d1jhna3 b.104.1.1 (A:270-411) 3.7 2.9E+02 0.021 20.4 2.6 10 116-125 121-130 (142)
3 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 2.7 2.4E+02 0.017 18.5 1.1 11 1-11 2-12 (89)
4 d2dira1 d.308.1.3 (A:8-92) THU 2.5 2.5E+02 0.018 18.1 1.0 18 216-233 56-73 (85)
5 d1w5fa1 c.32.1.1 (A:22-215) Ce 2.3 2E+02 0.014 21.8 0.3 10 1-10 1-10 (194)
6 d2b7ka1 c.47.1.10 (A:111-279) 2.2 3E+02 0.022 18.0 1.2 16 14-29 2-17 (169)
7 d1cfza_ c.56.1.1 (A:) Hydrogen 1.9 3.6E+02 0.027 19.1 1.3 13 1-13 1-13 (162)
8 d2g5ca2 c.2.1.6 (A:30-200) Pre 1.9 3.3E+02 0.024 18.6 0.9 10 1-10 1-11 (171)
9 d1ks9a2 c.2.1.6 (A:1-167) Keto 1.8 3.6E+02 0.026 18.0 1.0 9 1-9 1-9 (167)
10 d1vkza2 c.30.1.1 (A:4-93) Glyc 1.8 3.3E+02 0.024 18.1 0.7 10 1-10 1-10 (90)
No 1
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.50 E-value=70 Score=21.24 Aligned_cols=12 Identities=33% Similarity=0.537 Sum_probs=6.0
Q ss_pred CCCCCCCCCCCC
Q psy5512 165 MGGDVNTPNIGG 176 (245)
Q Consensus 165 ~~g~~~~Pdy~G 176 (245)
+.|.+.+|+||+
T Consensus 4 ~~G~i~SP~yP~ 15 (117)
T d1nzia1 4 MYGEILSPNYPQ 15 (117)
T ss_dssp SEEEEECTTTTS
T ss_pred cEEEEeCCCCCC
Confidence 344555555554
No 2
>d1jhna3 b.104.1.1 (A:270-411) Calnexin {Dog (Canis familiaris) [TaxId: 9615]}
Probab=3.68 E-value=2.9e+02 Score=20.40 Aligned_cols=10 Identities=30% Similarity=0.421 Sum_probs=4.7
Q ss_pred CCCCCCCCCC
Q psy5512 116 NAPNIGGDVN 125 (245)
Q Consensus 116 ~~Pd~~g~~s 125 (245)
.+|+|-|.+.
T Consensus 121 ~NPnYkG~W~ 130 (142)
T d1jhna3 121 DNPNYQGIWK 130 (142)
T ss_dssp ECTTCCCSCC
T ss_pred cCCCCcCCcC
Confidence 3444544444
No 3
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=2.67 E-value=2.4e+02 Score=18.50 Aligned_cols=11 Identities=55% Similarity=0.957 Sum_probs=7.6
Q ss_pred CceeeeccCcc
Q psy5512 1 MSILLIGIGGD 11 (245)
Q Consensus 1 ~~~~~~~~~~~ 11 (245)
|.|-++||||.
T Consensus 2 ~~ihfiGIgG~ 12 (89)
T d1j6ua1 2 MKIHFVGIGGI 12 (89)
T ss_dssp CEEEEETTTSH
T ss_pred cEEEEEeECHH
Confidence 56777777765
No 4
>d2dira1 d.308.1.3 (A:8-92) THUMP domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.55 E-value=2.5e+02 Score=18.13 Aligned_cols=18 Identities=17% Similarity=0.111 Sum_probs=12.6
Q ss_pred CCCccCCcCCCCccceec
Q psy5512 216 TPNIGGDVKTPKLQGNVL 233 (245)
Q Consensus 216 ~P~~~~d~~~p~~~~~~~ 233 (245)
.|.+.+|++.|++..-|.
T Consensus 56 ~~~~~VdL~~Pd~~I~Ve 73 (85)
T d2dira1 56 NSENKVDLTNPQYTVVVE 73 (85)
T ss_dssp CTTCEECSSSCSEEEEEE
T ss_pred CCCceeeccCCCEEEEEE
Confidence 566778888888765543
No 5
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}
Probab=2.34 E-value=2e+02 Score=21.85 Aligned_cols=10 Identities=50% Similarity=1.115 Sum_probs=7.0
Q ss_pred CceeeeccCc
Q psy5512 1 MSILLIGIGG 10 (245)
Q Consensus 1 ~~~~~~~~~~ 10 (245)
|.|+++|||+
T Consensus 1 ~kI~viGvGG 10 (194)
T d1w5fa1 1 LKIKVIGVGG 10 (194)
T ss_dssp CCEEEEEEHH
T ss_pred CeEEEEEeCc
Confidence 5677777775
No 6
>d2b7ka1 c.47.1.10 (A:111-279) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.23 E-value=3e+02 Score=17.98 Aligned_cols=16 Identities=25% Similarity=0.704 Sum_probs=10.6
Q ss_pred CCccCCCccccccCCC
Q psy5512 14 TPNIGGDVNTRNIGGD 29 (245)
Q Consensus 14 ~p~~~~~~~~~~~~~~ 29 (245)
+|.||+|.+..|..|+
T Consensus 2 ~p~~g~dF~l~d~~G~ 17 (169)
T d2b7ka1 2 KPSLGGPFHLEDMYGN 17 (169)
T ss_dssp CCCCCCCCEEEETTSC
T ss_pred CCCcCCCeEEEeCCCC
Confidence 4667777776666555
No 7
>d1cfza_ c.56.1.1 (A:) Hydrogenase maturating endopeptidase HybD {Escherichia coli [TaxId: 562]}
Probab=1.93 E-value=3.6e+02 Score=19.14 Aligned_cols=13 Identities=38% Similarity=0.733 Sum_probs=9.0
Q ss_pred CceeeeccCcccc
Q psy5512 1 MSILLIGIGGDFN 13 (245)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (245)
|.|+|.|+|--|-
T Consensus 1 MrilVlGiGN~l~ 13 (162)
T d1cfza_ 1 MRILVLGVGNILL 13 (162)
T ss_dssp CCEEEEEESCTTB
T ss_pred CeEEEEEECCccc
Confidence 6777777776543
No 8
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=1.87 E-value=3.3e+02 Score=18.64 Aligned_cols=10 Identities=40% Similarity=0.952 Sum_probs=6.7
Q ss_pred Cc-eeeeccCc
Q psy5512 1 MS-ILLIGIGG 10 (245)
Q Consensus 1 ~~-~~~~~~~~ 10 (245)
|. |.|+|+|+
T Consensus 1 Mk~I~IIG~G~ 11 (171)
T d2g5ca2 1 MQNVLIVGVGF 11 (171)
T ss_dssp CCEEEEESCSH
T ss_pred CCEEEEEccCH
Confidence 44 77888764
No 9
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}
Probab=1.80 E-value=3.6e+02 Score=17.99 Aligned_cols=9 Identities=44% Similarity=0.881 Sum_probs=6.8
Q ss_pred CceeeeccC
Q psy5512 1 MSILLIGIG 9 (245)
Q Consensus 1 ~~~~~~~~~ 9 (245)
|.|.|+|.|
T Consensus 1 MkI~IiGaG 9 (167)
T d1ks9a2 1 MKITVLGCG 9 (167)
T ss_dssp CEEEEECCS
T ss_pred CEEEEECcC
Confidence 778888865
No 10
>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=1.77 E-value=3.3e+02 Score=18.11 Aligned_cols=10 Identities=30% Similarity=0.873 Sum_probs=5.3
Q ss_pred CceeeeccCc
Q psy5512 1 MSILLIGIGG 10 (245)
Q Consensus 1 ~~~~~~~~~~ 10 (245)
|.|+|+|=|+
T Consensus 1 MkVLviGsGg 10 (90)
T d1vkza2 1 VRVHILGSGG 10 (90)
T ss_dssp CEEEEEECSH
T ss_pred CEEEEECCCH
Confidence 4555555554
Done!