BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5514
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5BJ61|B9D1_XENTR B9 domain-containing protein 1 OS=Xenopus tropicalis GN=b9d1 PE=2
SV=1
Length = 198
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 52 GIEEGISQISKHTAGCPQ-FVWNFPIEIVFKSNNPHGWPQLILCVYGLDGFGNDVIRGYG 110
G+EEGISQI+ + G Q VWNFPIEI FKS NP GWPQ+++ VYG D FGNDV+RGYG
Sbjct: 44 GVEEGISQITSKSQGGKQALVWNFPIEITFKSTNPFGWPQIVISVYGPDAFGNDVVRGYG 103
Query: 111 LCHLPISSGTTAK 123
HLP + G A+
Sbjct: 104 AVHLPFTPGRHAR 116
>sp|Q6DFD7|B9D1_XENLA B9 domain-containing protein 1 OS=Xenopus laevis GN=b9d1 PE=2 SV=1
Length = 198
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 52 GIEEGISQISKHTAGCPQ-FVWNFPIEIVFKSNNPHGWPQLILCVYGLDGFGNDVIRGYG 110
GIEEGISQI+ + G Q VWNFP+EI FKS NP+GWPQ+++ VYG D FGNDV+RGYG
Sbjct: 44 GIEEGISQITSKSQGGKQTLVWNFPVEITFKSTNPYGWPQIVISVYGPDVFGNDVVRGYG 103
Query: 111 LCHLPISSG 119
HLP + G
Sbjct: 104 AVHLPFTPG 112
>sp|Q9R1S0|B9D1_MOUSE B9 domain-containing protein 1 OS=Mus musculus GN=B9d1 PE=1 SV=1
Length = 204
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 35 CRYLGCLGVSRYLRKLFGIEEGISQISKHTAGCPQ-FVWNFPIEIVFKSNNPHGWPQLIL 93
C+Y C + G+EEGISQI+ + Q VWNFPI++ FKS NP+GWPQ++L
Sbjct: 30 CKY--CFVYGQDWAPTAGLEEGISQIASKSQDVRQALVWNFPIDVTFKSTNPYGWPQIVL 87
Query: 94 CVYGLDGFGNDVIRGYGLCHLPISSG 119
VYG D FGNDV+RGYG H+P+S G
Sbjct: 88 SVYGPDVFGNDVVRGYGAVHVPLSPG 113
>sp|P0C5J2|B9D1_RAT B9 domain-containing protein 1 OS=Rattus norvegicus GN=B9d1 PE=2
SV=1
Length = 204
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 35 CRYLGCLGVSRYLRKLFGIEEGISQISKHTAGCPQ-FVWNFPIEIVFKSNNPHGWPQLIL 93
C+Y C + G+EEGISQI+ + Q VWNFPI++ FKS NP+GWPQ++L
Sbjct: 30 CKY--CFVYGQDWAPTAGLEEGISQIASKSQDVRQALVWNFPIDVTFKSTNPYGWPQIVL 87
Query: 94 CVYGLDGFGNDVIRGYGLCHLPISSG 119
VYG D FGNDV+RGYG H+P S G
Sbjct: 88 SVYGPDVFGNDVVRGYGAVHVPFSPG 113
>sp|Q9UPM9|B9D1_HUMAN B9 domain-containing protein 1 OS=Homo sapiens GN=B9D1 PE=1 SV=1
Length = 204
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 35 CRYLGCLGVSRYLRKLFGIEEGISQISKHTAGCPQ-FVWNFPIEIVFKSNNPHGWPQLIL 93
C+Y C + G+EEGISQI+ + Q VWNFPI++ FKS NP+GWPQ++L
Sbjct: 30 CKY--CFVYGQDWAPTAGLEEGISQITSKSQDVRQALVWNFPIDVTFKSTNPYGWPQIVL 87
Query: 94 CVYGLDGFGNDVIRGYGLCHLPISSG 119
VYG D FGNDV+RGYG H+P S G
Sbjct: 88 SVYGPDVFGNDVVRGYGAVHVPFSPG 113
>sp|Q503B7|B9D1_DANRE B9 domain-containing protein 1 OS=Danio rerio GN=b9d1 PE=2 SV=1
Length = 201
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%)
Query: 52 GIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLILCVYGLDGFGNDVIRGYGL 111
G+EEGISQI+ VWNFP++I FKS NP GWPQ+++ VYG D FGNDV+RGYG
Sbjct: 45 GLEEGISQITSKGRLSQSLVWNFPLDITFKSTNPFGWPQIVVSVYGPDTFGNDVVRGYGA 104
Query: 112 CHLPISSGTTAK 123
H+P + G K
Sbjct: 105 VHIPFTPGKHTK 116
>sp|P0C5J3|B9D2_RAT B9 domain-containing protein 2 OS=Rattus norvegicus GN=B9d2 PE=2
SV=1
Length = 175
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 48 RKLFGIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLILCVYGLDGFGNDVIR 107
+ L G+ EG +Q+ G + W+ PI++ F + GWP+L L V+ D FG +
Sbjct: 34 KLLSGVREGQTQVDTPQTGDMAY-WSHPIDLHFATKGLQGWPRLHLQVWSQDSFGRCQLA 92
Query: 108 GYGLCHLPISSGT 120
GYG CH+P S GT
Sbjct: 93 GYGFCHVPSSPGT 105
>sp|Q56JY9|B9D2_BOVIN B9 domain-containing protein 2 OS=Bos taurus GN=B9D2 PE=2 SV=1
Length = 175
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 48 RKLFGIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLILCVYGLDGFGNDVIR 107
+ L G+ EG +Q+ G + W+ PI++ F + GWP+L L V+ D FG +
Sbjct: 34 KLLSGVREGQTQVDTPQIGDMAY-WSHPIDLHFATKGLQGWPRLHLQVWSQDSFGRCQLA 92
Query: 108 GYGLCHLPISSGT 120
GYG CH+P S GT
Sbjct: 93 GYGFCHVPSSPGT 105
>sp|Q3UK10|B9D2_MOUSE B9 domain-containing protein 2 OS=Mus musculus GN=B9d2 PE=1 SV=2
Length = 175
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 48 RKLFGIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLILCVYGLDGFGNDVIR 107
+ L G+ EG +Q+ G + W+ PI++ F + GWP+L L V+ D FG +
Sbjct: 34 KLLSGVREGQTQVDTPQIGDMAY-WSHPIDLHFATKGLQGWPRLHLQVWSQDSFGRCQLA 92
Query: 108 GYGLCHLPISSGT 120
GYG CH+P S GT
Sbjct: 93 GYGFCHVPSSPGT 105
>sp|Q9BPU9|B9D2_HUMAN B9 domain-containing protein 2 OS=Homo sapiens GN=B9D2 PE=1 SV=2
Length = 175
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 48 RKLFGIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLILCVYGLDGFGNDVIR 107
+ L G+ EG +Q+ G + W+ PI++ F + GWP+L V+ D FG +
Sbjct: 34 KLLSGVREGQTQVDTPQIGDMAY-WSHPIDLHFATKGLQGWPRLHFQVWSQDSFGRCQLA 92
Query: 108 GYGLCHLPISSGT 120
GYG CH+P S GT
Sbjct: 93 GYGFCHVPSSPGT 105
>sp|Q6GN70|B9D2_XENLA B9 domain-containing protein 2 OS=Xenopus laevis GN=b9d2 PE=2 SV=1
Length = 176
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 48 RKLFGIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLILCVYGLDGFGNDVIR 107
+ L G+ EG +Q+ H W+ PI++ F + GWP+L L V+ D FG + +
Sbjct: 34 KLLSGVVEGQTQVD-HPQNDDMAFWSHPIDMHFATKGLQGWPKLHLQVWHQDTFGRNELY 92
Query: 108 GYGLCHLPISSGT 120
GY H+P + GT
Sbjct: 93 GYSFLHIPSTPGT 105
>sp|Q6DGZ1|B9D2_DANRE B9 domain-containing protein 2 OS=Danio rerio GN=b9d2 PE=2 SV=1
Length = 175
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 48 RKLFGIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLILCVYGLDGFGNDVIR 107
R L G+ EG +Q+ G + W+ PI++ + + GWP+L L V+ D FG +
Sbjct: 34 RLLSGLREGQTQVDMPQTGDMAY-WSHPIDLHYTTKGLQGWPKLHLQVWHQDSFGRCQLY 92
Query: 108 GYGLCHLPISSGTTAKQ 124
GYG H+P S G Q
Sbjct: 93 GYGYIHVPSSPGQHRLQ 109
>sp|Q6E804|NOD2_BOVIN Nucleotide-binding oligomerization domain-containing protein 2
OS=Bos taurus GN=NOD2 PE=2 SV=1
Length = 1013
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 22 FKIGHTEVGTLGVCRYLGCLGVSR--YLRKLFGIEEGISQISKHTAGCPQF 70
++ H VG +GV + L CLGV + YLR + GI ++ +H C Q
Sbjct: 768 LQLDHNSVGDIGVEQLLPCLGVCKALYLRDNNISDRGICKLVEHALRCEQL 818
>sp|Q1B0P6|HOA2_MYCSS 4-hydroxy-2-oxovalerate aldolase 2 OS=Mycobacterium sp. (strain
MCS) GN=Mmcs_5438 PE=3 SV=1
Length = 349
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 50 LFGIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLILC-VYGLDGFGNDVIR 107
+ +EEG++++ AG N PIE + HGW C ++GL +D++R
Sbjct: 220 VVAVEEGVTRVDASLAGHGAGAGNCPIEPFIAVADLHGWKH--NCDLFGLQDAADDIVR 276
>sp|A1UQA1|HOA2_MYCSK 4-hydroxy-2-oxovalerate aldolase 2 OS=Mycobacterium sp. (strain
KMS) GN=Mkms_5835 PE=3 SV=1
Length = 349
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 50 LFGIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLILC-VYGLDGFGNDVIR 107
+ +EEG++++ AG N PIE + HGW C ++GL +D++R
Sbjct: 220 VVAVEEGVTRVDASLAGHGAGAGNCPIEPFIAVADLHGWKH--NCDLFGLQDAADDIVR 276
>sp|P30205|WC11_BOVIN Antigen WC1.1 OS=Bos taurus PE=2 SV=1
Length = 1436
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 34 VCRYLGCLGVSRYLRKLFGIEEGISQISK---HTAGCPQFVWNFPIEIVFKSNNPHGWPQ 90
VCR LGC GV+ + + EG QIS H +G F+W+ P+ + + HG
Sbjct: 832 VCRQLGC-GVAISTPRGPHLVEGGDQISTAQFHCSGAESFLWSCPVTALGGPDCSHGNTA 890
Query: 91 LILC 94
++C
Sbjct: 891 SVIC 894
>sp|Q06193|EF2_ENTHI Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1
Length = 840
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 38 LGCLGVSRYLRKLFGIEEGISQISKHTAGCPQFVWNFPIEIVFKSNNPHGWPQLI----- 92
+G +GV +YL K I + ++ I K +F + + + ++ NP P+L+
Sbjct: 452 IGLVGVDQYLLKSGTITDSVAHIIKDM----KFSVSPVVRVAVETKNPSDLPKLVEGMKR 507
Query: 93 ------LCVYGLDGFGNDVIRGYGLCHLPI 116
LC+ + G ++ G G HL +
Sbjct: 508 LSRSDPLCLCYTEESGEHIVAGAGELHLEV 537
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.144 0.478
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,156,084
Number of Sequences: 539616
Number of extensions: 1946772
Number of successful extensions: 3737
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3717
Number of HSP's gapped (non-prelim): 21
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)